BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004644
(740 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 566 bits (1459), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/626 (43%), Positives = 401/626 (64%), Gaps = 2/626 (0%)
Query: 107 DLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAM 166
D+ W + I+ Y R G +A +F +P + + +N M++GY + G + A+KL D M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP-RWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 167 PSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQ 226
P +++VSWN M+ GY +N + A + FE M ERDV SWN ML GY + +D A F
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 227 KIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARL 286
++PE+N VSW +LS Y +N +M EA LF +V+WN ++ +V++ +I EA +
Sbjct: 182 RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQF 241
Query: 287 FIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEAN 346
F M R+ VSW T+I GY + K+DEAR+L D+ P +++ TAM+SGY+QN+ ++EA
Sbjct: 242 FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 347 QIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDD 406
++FDK+ + V WN M+ GY Q RM+ A LF M +++ TWNTMI GYAQ ++ +
Sbjct: 302 ELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 361
Query: 407 AVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACA 466
A +F++M KR + VSW A+I+G+ Q+ +AL++FV M +EG + + S+ + ALS CA
Sbjct: 362 AKNLFDKMPKR-DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Query: 467 HLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNS 526
+ AL+LG+Q+H +K GY FVGN+L+ MY KCG I+ A LFK+ D++SWN+
Sbjct: 421 DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 480
Query: 527 LIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVY 586
+IAGY+ +G A++ FE M EG+ PD T + VLSACSH GLVD G + F MT+ Y
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDY 540
Query: 587 AIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIA 646
+ P +HYACM+DLL RAG L++A ++K M +P+A IWGTLLGA R+H N +L A
Sbjct: 541 GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETA 600
Query: 647 VEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHT 706
+K+ +EP+ + Y LLSN++A +GRW +V K+RV M G +K PG SWIE++N+ HT
Sbjct: 601 ADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHT 660
Query: 707 FLSGDPKQCRTAEICNTLKTLAAQIR 732
F GD EI L+ L +++
Sbjct: 661 FSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 358 bits (919), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 314/542 (57%), Gaps = 49/542 (9%)
Query: 49 YNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDL 108
+N IS+Y + GR N+A ++F++MP+ + VS+N MI+GYL N + + AR+LFD+M DL
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 109 FSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPS 168
SW +MI Y R L KARELF+++P + D WN M++GYA+ G ++A+ + D MP
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPER-DVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 169 KNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKI 228
KN VSWN++LS Y +N +M A F++ E +VSWN +L G+V+ + A +FF +
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 229 PEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFI 288
++VVSW T+++GYA++G++ EAR+LFD+ P+++V W AM++ Y+Q +EEA LF
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 289 EMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQI 348
+MPERN VSW M+ GYV+ +++ A+ L D MP +N++ MI+GY Q ++ EA +
Sbjct: 306 KMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 349 FDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM------VNK-----------DIVTW 391
FDK+ D V W MI GY+Q G EA+ LF QM +N+ D+V
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 392 ----------------------NTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISG 429
N ++ Y + +++A +F+EM ++ VSWN +I+G
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG-KDIVSWNTMIAG 484
Query: 430 FLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKS-GYVN 488
+ ++ F AL+ F M +EG K D +T+ LSAC+H + GRQ + + G +
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 489 DLFVGNSLITMYAKCGRIQNAELLFKDA--DPVDVISWNSLIAGYAINGNA----TEAIK 542
+ ++ + + G +++A L K+ +P D W +L+ ++GN T A K
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP-DAAIWGTLLGASRVHGNTELAETAADK 603
Query: 543 LF 544
+F
Sbjct: 604 IF 605
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/473 (31%), Positives = 262/473 (55%), Gaps = 21/473 (4%)
Query: 199 ERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQ 258
+ D+ WN+ + Y+ + A + F+++P + VS+ M+SGY RNG AR+LFD+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 259 MPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLL 318
MP R++V+WN MI YV+ + +A LF MPER+ SW TM+ GY + +D+AR +
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 319 DQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAIN 378
D+MP KN + A++S YVQN +M+EA +F +V WN ++ G+ + ++ EA
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 379 LFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLD 438
F M +D+V+WNT+I GYAQ ++D+A ++F+E ++ +W A++SG++QN +
Sbjct: 241 FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-SPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 439 ALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLIT 498
A ++F M + + + ++ LA + +++ +++ + ++ N++IT
Sbjct: 300 ARELFDKMPERNEVSWNAMLAGYVQG----ERMEMAKELFDVMP----CRNVSTWNTMIT 351
Query: 499 MYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVT 558
YA+CG+I A+ LF D +SW ++IAGY+ +G++ EA++LF +M EG + +
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 559 FIGVLSACSHVGLVDGGLKLFECMTE-VYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKG 617
F LS C+ V ++ G +L + + Y V + ++ + + G ++EA ++ K
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN--ALLLMYCKCGSIEEANDLFKE 469
Query: 618 MKIKPNAGIWGTLLGACRMHQNIKLGRIAVE-----KLSELEPQKTSCYALLS 665
M K W T++ H G +A+ K L+P + A+LS
Sbjct: 470 MAGKDIVS-WNTMIAGYSRH---GFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 229 bits (585), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 222/431 (51%), Gaps = 50/431 (11%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
V + N ++ ++G V++A +F +M +KN V++N+++SAY +N ++ +A LF+
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 75 RNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLL 134
LVSWN ++ G++ K+ EAR+ FD M D+ SW +IT Y + G++++AR+LFD
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDES 276
Query: 135 PNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFF 194
P +D W AMV+GY + EA++L D MP +N VSWN+ML+GY + M +A + F
Sbjct: 277 P-VQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 195 EAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARR 254
+ M R+V +WN M+ GY + + A F K+P+++ VSW M++GY+++G EA R
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 255 LFDQM-----------------PIRNVVAW----------------------NAMIAAYV 275
LF QM +VVA NA++ Y
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 276 QRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNI----AAQTA 331
+ G IEEA LF EM ++ VSW TMI GY R + A R + M + + A A
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 332 MISGYVQNKRMDEANQIFDKIGTHDVVCWN-----VMIKGYAQCGRMDEAINLFRQM-VN 385
++S +D+ Q F + V N M+ + G +++A NL + M
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Query: 386 KDIVTWNTMIA 396
D W T++
Sbjct: 576 PDAAIWGTLLG 586
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/597 (39%), Positives = 376/597 (62%), Gaps = 6/597 (1%)
Query: 144 NAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVV 203
N + ++IG +EA+KL D+ SK+I SWNSM++GY N A K F+ M +R+++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 204 SWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRN 263
SWN ++ GY++ ++D A K F +PE+NVVSW ++ GY NG++ A LF +MP +N
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 264 VVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPY 323
V+W M+ ++Q G+I++A +L+ +P+++ ++ T+MI G + ++DEAR + D+M
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 324 KNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM 383
+++ T M++GY QN R+D+A +IFD + V W M+ GY Q GR+++A LF M
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 384 VNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIF 443
K ++ N MI+G Q ++ A ++F+ M K RN SW +I +N F L+AL +F
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSM-KERNDASWQTVIKIHERNGFELEALDLF 319
Query: 444 VLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKC 503
+LM ++G + TL LS CA LA+L G+Q+H ++ + D++V + L+TMY KC
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 504 GRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEG-VAPDPVTFIGV 562
G + ++L+F D+I WNS+I+GYA +G EA+K+F EM + G P+ VTF+
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 563 LSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKP 622
LSACS+ G+V+ GLK++E M V+ ++P+ HYACM+D+L RAGR +EA EM+ M ++P
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 623 NAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRV 682
+A +WG+LLGACR H + + +KL E+EP+ + Y LLSNM+A GRW +V ++R
Sbjct: 500 DAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRK 559
Query: 683 SMEGSGAQKQPGCSWIEVKNQIHTFLSG----DPKQCRTAEICNTLKTLAAQIRNTP 735
M+ +K PGCSW EV+N++H F G P+Q +I + L L + P
Sbjct: 560 LMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNP 616
Score = 269 bits (687), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 181/612 (29%), Positives = 309/612 (50%), Gaps = 77/612 (12%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLV 78
N +IT L + G++ EA K+F K+ ++NSM++ Y N DARKLF++MP RN++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 79 SWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNKE 138
SWN +++GY+ N ++ EAR++FD M ++ SW ++ Y G+++ A LF +P K
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 139 DTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME 198
+ W M+ G+ + G ++A KL + +P K+ ++ SM+ G K G + A + F+ M
Sbjct: 141 KVS-WTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 199 ERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQ 258
ER V++W M+ GY + + +D A K F +PE+ VSW +ML GY +NGR+ +A LF+
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 259 MPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLL 318
MP++ V+A NAMI+ Q+G+I +A R+F M ERN SW T+I + R EA L
Sbjct: 260 MPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF 319
Query: 319 DQMPYKNIAAQ----TAMISGYVQNKRMDEANQIFDKIGTH----DVVCWNVMIKGYAQC 370
M + + +++S + Q+ ++ DV +V++ Y +C
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 371 GRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGF 430
G + ++ +F + +KDI+ WN++I+GYA ++A+K+F EM +SG
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP-----------LSG- 427
Query: 431 LQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDL 490
K + T LSAC++ ++ G +I+ +++S +
Sbjct: 428 -------------------STKPNEVTFVATLSACSYAGMVEEGLKIYE-SMESVF---- 463
Query: 491 FVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVME 550
G IT + C VD++ G A G EA+++ + M +E
Sbjct: 464 --GVKPITAHYACM--------------VDML-------GRA--GRFNEAMEMIDSMTVE 498
Query: 551 GVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVE-HYACMIDLLSRAGRLD 609
PD + +L AC +D + F C ++ IEP Y + ++ + GR
Sbjct: 499 ---PDAAVWGSLLGACRTHSQLD--VAEF-CAKKLIEIEPENSGTYILLSNMYASQGRWA 552
Query: 610 EAFEMVKGMKIK 621
+ E+ K MK +
Sbjct: 553 DVAELRKLMKTR 564
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 213/443 (48%), Gaps = 51/443 (11%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
+ + N ++ K+G ++EA K+F M ++N V++ +++ Y NG+V+ A LF +MP+
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 75 RNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLL 134
+N VSW M+ G+L + ++ +A +L++ + D + MI ++G +++ARE+FD +
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 135 PNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFF 194
++ W MV GY + ++A+K+ D MP K VSW SML GY +NG + A + F
Sbjct: 199 -SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF 257
Query: 195 EAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARR 254
E M + V++ N M+ G + ++ A + F + E+N SW T++ + RNG LEA
Sbjct: 258 EVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317
Query: 255 LFDQMPIR---------------------------------------NVVAWNAMIAAYV 275
LF M + +V + ++ Y+
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 276 QRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYK-----NIAAQT 330
+ G++ ++ +F P ++ + W ++I GY +EA ++ +MP N
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 331 AMISGYVQNKRMDEANQIFDKI----GTHDVVC-WNVMIKGYAQCGRMDEAINLFRQM-V 384
A +S ++E +I++ + G + + M+ + GR +EA+ + M V
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Query: 385 NKDIVTWNTMIAGYAQIRQMDDA 407
D W +++ Q+D A
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVA 520
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/599 (39%), Positives = 354/599 (59%), Gaps = 33/599 (5%)
Query: 115 ITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSW 174
I+ +R G++ +AR+ FD L K WN++V+GY G EA++L D M +N+VSW
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKA-IGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82
Query: 175 NSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVV 234
N ++SGY KN + A FE M ER+VVSW M+ GY++ + A F ++PE+N V
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 235 SWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN 294
SW M G +GR+ +AR+L+D MP+++VVA MI + G+++EA +F EM ERN
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 295 PVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGT 354
V+WTTMI GY + ++D AR+L + MP K + T+M+ GY + R+++A + F+ +
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 355 HDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEM 414
V+ N MI G+ + G + +A +F M ++D TW MI Y E
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAY-------------ERK 309
Query: 415 GKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLG 474
G F L+AL +F M ++G + +L LS CA LA+LQ G
Sbjct: 310 G-------------------FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 475 RQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAIN 534
RQ+H ++ + +D++V + L+TMY KCG + A+L+F D+I WNS+I+GYA +
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH 410
Query: 535 GNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEH 594
G EA+K+F EM G P+ VT I +L+ACS+ G ++ GL++FE M + + P VEH
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 595 YACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELE 654
Y+C +D+L RAG++D+A E+++ M IKP+A +WG LLGAC+ H + L +A +KL E E
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENE 530
Query: 655 PQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPK 713
P Y LLS+++A +W +V VR +M + K PGCSWIEV ++H F G K
Sbjct: 531 PDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIK 589
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 282/548 (51%), Gaps = 57/548 (10%)
Query: 17 NQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRN 76
N + +I++L + G++ EA K F + K ++NS++S Y NG +AR+LF++M +RN
Sbjct: 19 NCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN 78
Query: 77 LVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPN 136
+VSWN +++GY+ N + EAR +F+ M ++ SW M+ Y ++G + +A LF +P
Sbjct: 79 VVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 137 KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEA 196
+ + + W M G G ++A+KL D MP K++V+ +M+ G + G + A F+
Sbjct: 139 RNEVS-WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 197 MEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLF 256
M ER+VV+W M+ GY + + +D A K F+ +PE+ VSW +ML GY +GR+ +A F
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 257 DQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARR 316
+ MP++ V+A NAMI + + G+I +A R+F M +R+ +W MI Y R EA
Sbjct: 258 EVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 317 LLDQMPYKNIAAQ-TAMIS--------GYVQNKRMDEANQI---FDKIGTHDVVCWNVMI 364
L QM + + ++IS +Q R A+ + FD DV +V++
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD----DVYVASVLM 373
Query: 365 KGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWN 424
Y +CG + +A +F + +KDI+ WN++I+GYA ++A+KIF EM
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS-------- 425
Query: 425 ALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKS 484
SG + N+ TL L+AC++ L+ G +I +++S
Sbjct: 426 ---SGTMPNKV---------------------TLIAILTACSYAGKLEEGLEIFE-SMES 460
Query: 485 GYVNDLFVGN--SLITMYAKCGRIQNA-ELLFKDADPVDVISWNSLIAGYAINGN----A 537
+ V + + M + G++ A EL+ D W +L+ +
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 538 TEAIKLFE 545
A KLFE
Sbjct: 521 VAAKKLFE 528
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 233/446 (52%), Gaps = 21/446 (4%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
V + N ++ K+ + EA +F M ++N V++ +M+ Y + G V +A LF +MP+
Sbjct: 79 VVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 75 RNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLL 134
RN VSW M G + + ++ +AR+L+D M D+ + MI R+G +++AR +FD +
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM 198
Query: 135 PNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFF 194
+ + W M+ GY + + A+KL + MP K VSW SML GYT +G + A +FF
Sbjct: 199 RER-NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 195 EAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARR 254
E M + V++ N M+ G+ E+ ++ A + F + +++ +W M+ Y R G LEA
Sbjct: 258 EVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 255 LFDQMPIRNV-VAWNAMIA--------AYVQRGQIEEAARLFIEMPERNPVSWTTMIDGY 305
LF QM + V ++ ++I+ A +Q G+ A + + + V+ + ++ Y
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVA-SVLMTMY 376
Query: 306 VRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDV----VCWN 361
V+ +L +A+ + D+ K+I ++ISGY + +EA +IF ++ + V
Sbjct: 377 VKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLI 436
Query: 362 VMIKGYAQCGRMDEAINLFRQMVNKDIVT-----WNTMIAGYAQIRQMDDAVKIFEEMGK 416
++ + G+++E + +F M +K VT ++ + + Q+D A+++ E M
Sbjct: 437 AILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTI 496
Query: 417 RRNTVSWNALISGFLQNEFHLDALKI 442
+ + W AL+ G + LD ++
Sbjct: 497 KPDATVWGALL-GACKTHSRLDLAEV 521
>sp|O04590|PPR88_ARATH Pentatricopeptide repeat-containing protein At1g62260,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2
SV=1
Length = 656
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/602 (36%), Positives = 356/602 (59%), Gaps = 58/602 (9%)
Query: 154 GNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYV 213
G EA+ + + + ++N V+WN+M+SGY K EM+ A K F+ M +RDVV+WN M+ GYV
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 214 E---LDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAM 270
+ L+ A K F ++P ++ SW TM+SGYA+N R+ EA LF++MP RN V+W+AM
Sbjct: 114 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAM 173
Query: 271 IAAYVQRGQIEEAARLFIEMP--ERNPV-------------------------------- 296
I + Q G+++ A LF +MP + +P+
Sbjct: 174 ITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRED 233
Query: 297 ---SWTTMIDGYVRIAKLDEARRLLDQMP---------------YKNIAAQTAMISGYVQ 338
++ T+I GY + +++ AR L DQ+P KN+ + +MI Y++
Sbjct: 234 LVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLK 293
Query: 339 NKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGY 398
+ A +FD++ D + WN MI GY RM++A LF +M N+D +WN M++GY
Sbjct: 294 VGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGY 353
Query: 399 AQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTL 458
A + ++ A FE+ ++ +TVSWN++I+ + +N+ + +A+ +F+ M EG+K D TL
Sbjct: 354 ASVGNVELARHYFEKTPEK-HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 459 ACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDAD- 517
LSA L L+LG Q+H + +K+ + D+ V N+LITMY++CG I + +F +
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 518 PVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLK 577
+VI+WN++I GYA +GNA+EA+ LF M G+ P +TF+ VL+AC+H GLVD
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 578 LFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMH 637
F M VY IEP +EHY+ ++++ S G+ +EA ++ M +P+ +WG LL ACR++
Sbjct: 532 QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIY 591
Query: 638 QNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSW 697
N+ L +A E +S LEP+ ++ Y LL NM+A+ G WDE +VR++ME +K+ G SW
Sbjct: 592 NNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSW 651
Query: 698 IE 699
++
Sbjct: 652 VD 653
Score = 266 bits (679), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 259/480 (53%), Gaps = 32/480 (6%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLV 78
NK++ Q+ +SG + EA IF ++ +NTVT+N+MIS Y K +N ARKLF+ MP+R++V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 79 SWNSMIAGYLHNDKVK---EARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLP 135
+WN+MI+GY+ ++ EAR+LFD+M D FSW MI+ Y + + +A LF+ +P
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 136 NKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLAS---- 191
+ + W+AM+ G+ + G + A L MP K+ ++++G KN + A+
Sbjct: 164 ER-NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 192 KFFEAMEERD--VVSWNLMLDGYVELDDLDSAWKFFQKIPE---------------QNVV 234
++ + R+ V ++N ++ GY + +++A F +IP+ +NVV
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 235 SWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN 294
SW +M+ Y + G ++ AR LFDQM R+ ++WN MI YV ++E+A LF EMP R+
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
Query: 295 PVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIF----- 349
SW M+ GY + ++ AR ++ P K+ + ++I+ Y +NK EA +F
Sbjct: 343 AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 350 --DKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDA 407
+K H + G + + + V D+ N +I Y++ ++ ++
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMES 462
Query: 408 VKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAH 467
+IF+EM +R ++WNA+I G+ + +AL +F M G H T L+ACAH
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 228/466 (48%), Gaps = 49/466 (10%)
Query: 16 FNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQR 75
F+ N I+ K+ R+ EA+ +F +M ++N V++++MI+ + +NG V+ A LF +MP +
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK 196
Query: 76 NLVSWNSMIAGYLHNDKVKEARELFDKM-----FRPDL-FSWALMITCYTRKGELEKARE 129
+ +++AG + N+++ EA + + R DL +++ +I Y ++G++E AR
Sbjct: 197 DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARC 256
Query: 130 LFDLLPNK--------------EDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWN 175
LFD +P+ ++ WN+M+ Y K+G+ A+ L D M ++ +SWN
Sbjct: 257 LFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWN 316
Query: 176 SMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVS 235
+M+ GY M A F M RD SWN+M+ GY + +++ A +F+K PE++ VS
Sbjct: 317 TMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS 376
Query: 236 WVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPE--- 292
W ++++ Y +N EA LF +M I + + + RL ++M +
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV 436
Query: 293 -----RNPVSWTTMIDGYVRIAKLDEARRLLDQMPYK-NIAAQTAMISGYVQNKRMDEAN 346
PV +I Y R ++ E+RR+ D+M K + AMI GY + EA
Sbjct: 437 KTVIPDVPVH-NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 347 QIFDKIGTHDV----VCWNVMIKGYAQCGRMDEAINLFRQM-----VNKDIVTWNTMIAG 397
+F + ++ + + + ++ A G +DEA F M + + +++++
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
Query: 398 YAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIF 443
+ Q ++A+ I M + W AL LDA +I+
Sbjct: 556 TSGQGQFEEAMYIITSMPFEPDKTVWGAL----------LDACRIY 591
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 196/397 (49%), Gaps = 29/397 (7%)
Query: 266 AWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKN 325
A N + ++ G I EA +F ++ RN V+W TMI GYV+ ++++AR+L D MP ++
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRD 101
Query: 326 IAAQTAMISGYVQN---KRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQ 382
+ MISGYV + ++EA ++FD++ + D WN MI GYA+ R+ EA+ LF +
Sbjct: 102 VVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEK 161
Query: 383 MVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKI 442
M ++ V+W+ MI G+ Q ++D AV +F +M +++ AL++G ++NE +A +
Sbjct: 162 MPERNAVSWSAMITGFCQNGEVDSAVVLFRKM-PVKDSSPLCALVAGLIKNERLSEAAWV 220
Query: 443 F-----VLMTQEGKKADHSTLACALSACAHL-AALQLGRQI-------HHLAIKSGYVND 489
++ +E ++TL + AA L QI H + + +
Sbjct: 221 LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKN 280
Query: 490 LFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVM 549
+ NS+I Y K G + +A LLF D ISWN++I GY +A LF EM
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Query: 550 EGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLD 609
D ++ ++S + VG V+ FE E + + + +I +
Sbjct: 341 R----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYK 391
Query: 610 EAFEMVKGMKI---KPNAGIWGTLLGACRMHQNIKLG 643
EA ++ M I KP+ +LL A N++LG
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG 428
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 168/357 (47%), Gaps = 58/357 (16%)
Query: 8 IGNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQ---------------KNTVTYNSM 52
+ + V+ N I G+ G+VE A +F Q+ KN V++NSM
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 53 ISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWA 112
I AY K G V AR LF+QM R+ +SWN+MI GY+H ++++A LF +M D SW
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWN 347
Query: 113 LMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAM------ 166
+M++ Y G +E AR F+ P K T WN+++A Y K +Y EA L M
Sbjct: 348 MMVSGYASVGNVELARHYFEKTPEKH-TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 167 PSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQ 226
P + ++ S+LS T + L M+ +V ++ D
Sbjct: 407 PDPHTLT--SLLSASTGLVNLRL------GMQMHQIVVKTVIPD---------------- 442
Query: 227 KIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPI-RNVVAWNAMIAAYVQRGQIEEAAR 285
+P N + +TM Y+R G ++E+RR+FD+M + R V+ WNAMI Y G EA
Sbjct: 443 -VPVHNAL--ITM---YSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALN 496
Query: 286 LFIEMPER----NPVSWTTMIDGYVRIAKLDEAR-RLLDQMPYKNIAAQTAMISGYV 337
LF M + +++ ++++ +DEA+ + + M I Q S V
Sbjct: 497 LFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLV 553
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 18 QNKKITQLGKSGRVEEAIKIFSQMS-QKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRN 76
N IT + G + E+ +IF +M ++ +T+N+MI YA +G ++A LF M
Sbjct: 446 HNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNG 505
Query: 77 L----VSWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKA 127
+ +++ S++ H V EA+ F M P + ++ ++ + +G+ E+A
Sbjct: 506 IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEA 565
Query: 128 RELFDLLPNKEDTACWNAMVAG---YAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKN 184
+ +P + D W A++ Y +G + A + + + ++ + + + Y
Sbjct: 566 MYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADM 625
Query: 185 GEMHLASKFFEAMEERDV 202
G AS+ ME + +
Sbjct: 626 GLWDEASQVRMNMESKRI 643
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 340/554 (61%), Gaps = 5/554 (0%)
Query: 183 KNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKI-PEQNVVSWVTMLS 241
K G++ A K F+ + ERDVV+W ++ GY++L D+ A + F ++ +NVV+W M+S
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVS 117
Query: 242 GYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTM 301
GY R+ ++ A LF +MP RNVV+WN MI Y Q G+I++A LF EMPERN VSW +M
Sbjct: 118 GYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSM 177
Query: 302 IDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWN 361
+ V+ ++DEA L ++MP +++ + TAM+ G +N ++DEA ++FD + +++ WN
Sbjct: 178 VKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWN 237
Query: 362 VMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTV 421
MI GYAQ R+DEA LF+ M +D +WNTMI G+ + R+M+ A +F+ M ++ N +
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK-NVI 296
Query: 422 SWNALISGFLQNEFHLDALKIFVLMTQEGK-KADHSTLACALSACAHLAALQLGRQIHHL 480
SW +I+G+++N+ + +AL +F M ++G K + T LSAC+ LA L G+QIH L
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 481 AIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPV--DVISWNSLIAGYAINGNAT 538
KS + + V ++L+ MY+K G + A +F + D+ISWNS+IA YA +G+
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 539 EAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACM 598
EAI+++ +M G P VT++ +L ACSH GLV+ G++ F+ + ++ EHY C+
Sbjct: 417 EAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCL 476
Query: 599 IDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKT 658
+DL RAGRL + + + + +G +L AC +H + + + V+K+ E
Sbjct: 477 VDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDA 536
Query: 659 SCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTA 718
Y L+SN++A G+ +E ++R+ M+ G +KQPGCSW++V Q H F+ GD +
Sbjct: 537 GTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFE 596
Query: 719 EICNTLKTLAAQIR 732
+ + L L ++R
Sbjct: 597 ALDSILSDLRNKMR 610
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 238/393 (60%), Gaps = 10/393 (2%)
Query: 92 KVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYA 151
K+ EAR+LFD + D+ +W +IT Y + G++ +ARELFD + ++++ W AMV+GY
Sbjct: 61 KIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYL 120
Query: 152 KIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDG 211
+ + A+ L MP +N+VSWN+M+ GY ++G + A + F+ M ER++VSWN M+
Sbjct: 121 RSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKA 180
Query: 212 YVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMI 271
V+ +D A F+++P ++VVSW M+ G A+NG++ EARRLFD MP RN+++WNAMI
Sbjct: 181 LVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMI 240
Query: 272 AAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTA 331
Y Q +I+EA +LF MPER+ SW TMI G++R ++++A L D+MP KN+ + T
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTT 300
Query: 332 MISGYVQNKRMDEANQIFDKIGTHDVVCWNV--MIKGYAQCGRMDEAI--NLFRQMVNKD 387
MI+GYV+NK +EA +F K+ V NV + + C + + Q+++K
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 388 IVTWNTMIAG-----YAQIRQMDDAVKIFEE-MGKRRNTVSWNALISGFLQNEFHLDALK 441
+ N ++ Y++ ++ A K+F+ + +R+ +SWN++I+ + + +A++
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 442 IFVLMTQEGKKADHSTLACALSACAHLAALQLG 474
++ M + G K T L AC+H ++ G
Sbjct: 421 MYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 228/394 (57%), Gaps = 17/394 (4%)
Query: 37 IFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEA 96
I+S S+ +I K G++ +ARKLF+ +P+R++V+W +I GY+ ++EA
Sbjct: 37 IYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA 96
Query: 97 RELFDKM-FRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGN 155
RELFD++ R ++ +W M++ Y R +L A LF +P + + WN M+ GYA+ G
Sbjct: 97 RELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER-NVVSWNTMIDGYAQSGR 155
Query: 156 YNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVEL 215
++A +L D MP +NIVSWNSM+ + G + A FE M RDVVSW M+DG +
Sbjct: 156 IDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKN 215
Query: 216 DDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYV 275
+D A + F +PE+N++SW M++GYA+N R+ EA +LF MP R+ +WN MI ++
Sbjct: 216 GKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFI 275
Query: 276 QRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQM-----------PYK 324
+ ++ +A LF MPE+N +SWTTMI GYV + +EA + +M Y
Sbjct: 276 RNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV 335
Query: 325 NIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQ-- 382
+I + + ++G V+ +++ + I + + + + ++ Y++ G + A +F
Sbjct: 336 SILSACSDLAGLVEGQQIHQL--ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGL 393
Query: 383 MVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGK 416
+ +D+++WN+MIA YA +A++++ +M K
Sbjct: 394 VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 222/374 (59%), Gaps = 13/374 (3%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQR-NLVSW 80
I +L K G++ EA K+F + +++ VT+ +I+ Y K G + +AR+LF+++ R N+V+W
Sbjct: 53 IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTW 112
Query: 81 NSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDT 140
+M++GYL + ++ A LF +M ++ SW MI Y + G ++KA ELFD +P + +
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER-NI 171
Query: 141 ACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEER 200
WN+MV + G +EA L + MP +++VSW +M+ G KNG++ A + F+ M ER
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 201 DVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMP 260
+++SWN M+ GY + + +D A + FQ +PE++ SW TM++G+ RN M +A LFD+MP
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP 291
Query: 261 IRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPV-----SWTTMIDGYVRIAKLDEAR 315
+NV++W MI YV+ + EEA +F +M V ++ +++ +A L E +
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 316 RLLD----QMPYKNIAAQTAMISGYVQNKRMDEANQIFDK--IGTHDVVCWNVMIKGYAQ 369
++ + KN +A+++ Y ++ + A ++FD + D++ WN MI YA
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 370 CGRMDEAINLFRQM 383
G EAI ++ QM
Sbjct: 412 HGHGKEAIEMYNQM 425
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 169/287 (58%), Gaps = 12/287 (4%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
V + N I +SGR+++A+++F +M ++N V++NSM+ A + GR+++A LFE+MP+
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 75 RNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLL 134
R++VSW +M+ G N KV EAR LFD M ++ SW MIT Y + +++A +LF ++
Sbjct: 200 RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 135 PNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFF 194
P + D A WN M+ G+ + N+A L D MP KN++SW +M++GY +N E A F
Sbjct: 260 PER-DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVF 318
Query: 195 EAMEERDVVSWNL-----MLDGYVELDDLDSAWKFFQKIP----EQNVVSWVTMLSGYAR 245
M V N+ +L +L L + Q I ++N + +L+ Y++
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSK 378
Query: 246 NGRMLEARRLFDQMPI--RNVVAWNAMIAAYVQRGQIEEAARLFIEM 290
+G ++ AR++FD + R++++WN+MIA Y G +EA ++ +M
Sbjct: 379 SGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 209/397 (52%), Gaps = 31/397 (7%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLV 78
N + L + GR++EA+ +F +M +++ V++ +M+ AKNG+V++AR+LF+ MP+RN++
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Query: 79 SWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNKE 138
SWN+MI GY N+++ EA +LF M D SW MIT + R E+ KA LFD +P K
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK- 293
Query: 139 DTACWNAMVAGYAKIGNYNEA-----KKLLDAMPSKNIVSWNSMLS------GYTKNGEM 187
+ W M+ GY + EA K L D N+ ++ S+LS G + ++
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI 353
Query: 188 H-LASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQK--IPEQNVVSWVTMLSGYA 244
H L SK ++ +++ + + +L+ Y + +L +A K F + +++++SW +M++ YA
Sbjct: 354 HQLISK---SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 245 RNGRMLEARRLFDQMPIR----NVVAWNAMIAAYVQRGQIEEAARLFIEM--PERNPV-- 296
+G EA +++QM + V + ++ A G +E+ F ++ E P+
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE 470
Query: 297 -SWTTMIDGYVRIAKLDEARRLLDQMPYK-NIAAQTAMISGYVQNKRMDEANQIFDKI-- 352
+T ++D R +L + ++ + + + A++S + + A ++ K+
Sbjct: 471 EHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLE 530
Query: 353 -GTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDI 388
G+ D + +M YA G+ +EA + +M K +
Sbjct: 531 TGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 49/269 (18%)
Query: 363 MIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVS 422
+I + G++ EA LF + +D+VTW +I GY ++ M +A ++F+ + R+N V+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 423 WNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAI 482
W A++SG+L+++ L I ++ QE +
Sbjct: 112 WTAMVSGYLRSK----QLSIAEMLFQEMPE------------------------------ 137
Query: 483 KSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIK 542
++ N++I YA+ GRI A LF + +++SWNS++ G EA+
Sbjct: 138 -----RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMN 192
Query: 543 LFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLL 602
LFE M D V++ ++ + G VD +LF+CM E I + MI
Sbjct: 193 LFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS-----WNAMITGY 243
Query: 603 SRAGRLDEAFEMVKGMKIKPNAGIWGTLL 631
++ R+DEA ++ + M + A W T++
Sbjct: 244 AQNNRIDEADQLFQVMPERDFAS-WNTMI 271
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/613 (36%), Positives = 352/613 (57%), Gaps = 26/613 (4%)
Query: 144 NAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVV 203
N ++ Y+K G+ + +++ D MP +NI +WNS+++G TK G + A F +M ERD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 204 SWNLMLDGYVELDDLDSAWKFFQKIPEQNVV-------SWVTMLSGYARNGRMLEARRLF 256
+WN M+ G+ + D + A +F + ++ V S ++ SG + ++ L
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 257 DQMP-IRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVR----IAKL 311
+ P + +V +A++ Y + G + +A R+F EM +RN VSW ++I + + + L
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 312 D------EARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIK 365
D E+R D++ ++ + A +S + + DK+ +D++ N +
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL-RNDIILSNAFVD 297
Query: 366 GYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNA 425
YA+C R+ EA +F M ++++ +MI+GYA A +F +M +R N VSWNA
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER-NVVSWNA 356
Query: 426 LISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSG 485
LI+G+ QN + +AL +F L+ +E H + A L ACA LA L LG Q H +K G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 486 YV------NDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATE 539
+ +D+FVGNSLI MY KCG ++ L+F+ D +SWN++I G+A NG E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476
Query: 540 AIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMI 599
A++LF EM+ G PD +T IGVLSAC H G V+ G F MT + + PL +HY CM+
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536
Query: 600 DLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTS 659
DLL RAG L+EA M++ M ++P++ IWG+LL AC++H+NI LG+ EKL E+EP +
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596
Query: 660 CYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAE 719
Y LLSNM+AE G+W++V VR SM G KQPGCSWI+++ H F+ D R +
Sbjct: 597 PYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQ 656
Query: 720 ICNTLKTLAAQIR 732
I + L L A++R
Sbjct: 657 IHSLLDILIAEMR 669
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/562 (27%), Positives = 268/562 (47%), Gaps = 76/562 (13%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
+F QN+ I K G +E+ ++F +M Q+N T+NS+++ K G +++A LF MP+
Sbjct: 55 IFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPE 114
Query: 75 RNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDL----FSWALMITCYTRKGELEKAREL 130
R+ +WNSM++G+ +D+ +EA F M + +S+A +++ + ++ K ++
Sbjct: 115 RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQV 174
Query: 131 FDLL---PNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEM 187
L+ P D +A+V Y+K GN N+A+++ D M +N+VSWNS+++ + +NG
Sbjct: 175 HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA 234
Query: 188 HLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIP---------EQNVVSWVT 238
A F+ M E V + L + SA K Q++ +++
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNA 294
Query: 239 MLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSW 298
+ YA+ R+ EAR +FD MPIRNV+A +MI+ Y + A +F +M ERN VSW
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSW 354
Query: 299 TTMIDGYVRIAKLDEARRLL----------DQMPYKNIAAQTAMIS----GYVQNKRMDE 344
+I GY + + +EA L + NI A ++ G + + +
Sbjct: 355 NALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK 414
Query: 345 ANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQM 404
F D+ N +I Y +CG ++E +FR+M+ +D V+WN MI G+AQ
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ---- 470
Query: 405 DDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSA 464
N + +AL++F M + G+K DH T+ LSA
Sbjct: 471 ----------------------------NGYGNEALELFREMLESGEKPDHITMIGVLSA 502
Query: 465 CAHLAALQLGRQIHHLAIKSGYVNDLFVG------NSLITMYAKCGRIQNAELLFKDADP 518
C H ++ GR H+ S D V ++ + + G ++ A+ + ++ P
Sbjct: 503 CGHAGFVEEGR--HYF---SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM-P 556
Query: 519 V--DVISWNSLIAGYAINGNAT 538
+ D + W SL+A ++ N T
Sbjct: 557 MQPDSVIWGSLLAACKVHRNIT 578
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 174/373 (46%), Gaps = 64/373 (17%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
S V+ + + K G V +A ++F +M +N V++NS+I+ + +NG +A +F+ M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 73 PQRNL----VSWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGE 123
+ + V+ S+I+ +K +E+ ++ R D+ + Y +
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 124 LEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTK 183
+++AR +FD +P + A +M++GYA + A+ + M +N+VSWN++++GYT+
Sbjct: 305 IKEARFIFDSMPIRNVIA-ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 184 NG-----------------------------------EMHLASKF----------FEAME 198
NG E+HL + F++ E
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 199 ERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQ 258
E D+ N ++D YV+ ++ + F+K+ E++ VSW M+ G+A+NG EA LF +
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483
Query: 259 M----PIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVS-----WTTMIDGYVRIA 309
M + + +++A G +EE F M V+ +T M+D R
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAG 543
Query: 310 KLDEARRLLDQMP 322
L+EA+ ++++MP
Sbjct: 544 FLEEAKSMIEEMP 556
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 67/257 (26%)
Query: 454 DHSTLACALSAC--AHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQN--- 508
D S A L +C + L+A+ + R +H IKSG+ N++F+ N LI Y+KCG +++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 509 ----------------------------AELLFKDADPVDVISWNSLIAGYAINGNATEA 540
A+ LF+ D +WNS+++G+A + EA
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 541 IKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFEC------MTEVYAIEPLVEH 594
+ F M EG + +F VLSACS + ++ G+++ +++VY LV+
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 595 YA------------------------CMIDLLSRAGRLDEA---FEMVKGMKIKPNAGIW 627
Y+ +I + G EA F+M+ +++P+
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 628 GTLLGACRMHQNIKLGR 644
+++ AC IK+G+
Sbjct: 257 ASVISACASLSAIKVGQ 273
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
+F N I K G VEE +F +M +++ V++N+MI +A+NG N+A +LF +M +
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Query: 75 R----NLVSWNSMIAGYLHNDKVKEARELFDKMFR-----PDLFSWALMITCYTRKGELE 125
+ ++ +++ H V+E R F M R P + M+ R G LE
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLE 546
Query: 126 KARELFDLLPNKEDTACWNAMVAGYA-----KIGNYNEAKKLLDAMPSKN 170
+A+ + + +P + D+ W +++A +G Y A+KLL+ PS +
Sbjct: 547 EAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKY-VAEKLLEVEPSNS 595
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/663 (35%), Positives = 375/663 (56%), Gaps = 14/663 (2%)
Query: 81 NSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDT 140
NS I+ + N ++EA +F +M + SW MI+ Y G++ KA ++FD +P + T
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 141 ACWNAMVAGYAK-IGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFF--EAM 197
+ +NAM+ K + +A +L +P KN VS+ +M++G+ + G A + +
Sbjct: 114 S-YNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPV 172
Query: 198 EERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFD 257
+ RD V+ N++L GY+ + A + FQ + + VVS +M+ GY + GR+++AR LFD
Sbjct: 173 KFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFD 232
Query: 258 QMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPV-----SWTTMIDG---YVRIA 309
+M RNV+ W AMI Y + G E+ LF+ M + V + M +VR
Sbjct: 233 RMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYR 292
Query: 310 KLDEARRLLDQMPYK-NIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYA 368
+ + L+ +MP + ++ +++S Y + M EA +F + D V WN +I G
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 369 QCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALIS 428
Q ++ EA LF +M KD+V+W MI G++ ++ V++F M ++ N ++W A+IS
Sbjct: 353 QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDN-ITWTAMIS 411
Query: 429 GFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVN 488
F+ N ++ +AL F M Q+ + T + LSA A LA L G QIH +K VN
Sbjct: 412 AFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN 471
Query: 489 DLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMV 548
DL V NSL++MY KCG +A +F +++S+N++I+GY+ NG +A+KLF +
Sbjct: 472 DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Query: 549 MEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRL 608
G P+ VTF+ +LSAC HVG VD G K F+ M Y IEP +HYACM+DLL R+G L
Sbjct: 532 SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLL 591
Query: 609 DEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMH 668
D+A ++ M KP++G+WG+LL A + H + L +A +KL ELEP + Y +LS ++
Sbjct: 592 DDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLY 651
Query: 669 AEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLA 728
+ G+ + +++ + +K PG SWI +K ++H FL+GD Q EI TLK +
Sbjct: 652 SIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIR 711
Query: 729 AQI 731
++
Sbjct: 712 KEM 714
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 276/522 (52%), Gaps = 52/522 (9%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
+F N +I++ ++G ++EA IF QMS ++ V++ +MISAYA+NG+++ A ++F++MP
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 75 RNLVSWNSMIAGYLHND-KVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDL 133
R S+N+MI + N + +A ELF + + S+A MIT + R G ++A L+
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 134 LPNK-EDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASK 192
P K D+ N +++GY + G +NEA ++ M K +VS +SM+ GY K G + A
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 193 FFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQ--------------------- 231
F+ M ER+V++W M+DGY + + + F ++ ++
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 232 ---------NVVSWV----------TMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIA 272
+VS + +++S Y++ G M EA+ +F M ++ V+WN++I
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 273 AYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAM 332
VQR QI EA LF +MP ++ VSWT MI G+ ++ + L MP K+ TAM
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 333 ISGYVQNKRMDEANQIFDKIGTHDVV----CWNVMIKGYAQCGRMDEAINLFRQMVNKDI 388
IS +V N +EA F K+ +V ++ ++ A + E + + ++V +I
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 389 V----TWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFV 444
V N++++ Y + +DA KIF + + N VS+N +ISG+ N F ALK+F
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE-PNIVSYNTMISGYSYNGFGKKALKLFS 528
Query: 445 LMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGY 486
++ GK+ + T LSAC H+ + LG + + ++KS Y
Sbjct: 529 MLESSGKEPNGVTFLALLSACVHVGYVDLGWK-YFKSMKSSY 569
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 150/292 (51%), Gaps = 18/292 (6%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLF 109
NS++S Y+K G + +A+ +F M ++ VSWNS+I G + ++ EA ELF+KM D+
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMV 373
Query: 110 SWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEA----KKLLDA 165
SW MI ++ KGE+ K ELF ++P K D W AM++ + G Y EA K+L
Sbjct: 374 SWTDMIKGFSGKGEISKCVELFGMMPEK-DNITWTAMISAFVSNGYYEEALCWFHKMLQK 432
Query: 166 MPSKNIVSWNSMLSGYTKNGE----MHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSA 221
N +++S+LS + + + + + D+ N ++ Y + + + A
Sbjct: 433 EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Query: 222 WKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIR----NVVAWNAMIAAYVQR 277
+K F I E N+VS+ TM+SGY+ NG +A +LF + N V + A+++A V
Sbjct: 493 YKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHV 552
Query: 278 GQIEEAARLFIEMP-----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYK 324
G ++ + F M E P + M+D R LD+A L+ MP K
Sbjct: 553 GYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCK 604
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 180/395 (45%), Gaps = 56/395 (14%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
+F N ++ K G + EA +F M K++V++NS+I+ + ++++A +LFE+MP
Sbjct: 310 LFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 75 RNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLL 134
+++VSW MI G+ ++ + ELF M D +W MI+ + G E+A F +
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 135 PNKE--------------------------------------DTACWNAMVAGYAKIGNY 156
KE D + N++V+ Y K GN
Sbjct: 430 LQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNT 489
Query: 157 NEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----ERDVVSWNLMLDGY 212
N+A K+ + NIVS+N+M+SGY+ NG A K F +E E + V++ +L
Sbjct: 490 NDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC 549
Query: 213 VELDDLDSAWKFFQKIP-----EQNVVSWVTMLSGYARNGRMLEARRLFDQMPIR-NVVA 266
V + +D WK+F+ + E + M+ R+G + +A L MP + +
Sbjct: 550 VHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGV 609
Query: 267 WNAMIAA---YVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPY 323
W ++++A +++ E AA+ IE+ + + + Y I K + R+++
Sbjct: 610 WGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKS 669
Query: 324 KNIAAQTA----MISGYVQNKRMDEANQI-FDKIG 353
K I ++ G V N + +Q+ ++IG
Sbjct: 670 KRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIG 704
>sp|P0C7R0|PPR69_ARATH Pentatricopeptide repeat-containing protein At1g32415,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2
SV=1
Length = 761
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 256/742 (34%), Positives = 403/742 (54%), Gaps = 65/742 (8%)
Query: 8 IGNKGSY---VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNT----VTYNSMISAYAKNG 60
I N GSY N+ I + G + A + ++ Q+ + V + S++S YAK G
Sbjct: 32 IPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTG 91
Query: 61 RVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTR 120
+++AR LFE MP+RN+V+ N+M+ GY+ ++ EA LF +M + ++ SW +M+T
Sbjct: 92 YLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCD 150
Query: 121 KGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSG 180
G E A ELFD +P + + WN +V G + G+ +AK++ DAMPS+++VSWN+M+ G
Sbjct: 151 DGRSEDAVELFDEMPER-NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKG 209
Query: 181 YTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTML 240
Y +N M A F M E++VV+W M+ GY D+ A++ F ++PE+N+VSW M+
Sbjct: 210 YIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMI 269
Query: 241 SGYARNGRMLEARRLFDQMPIR-NVVAWNA---MIAAYVQRGQIEEAARLFIEMPERNPV 296
SG+A N EA LF +M + V+ N + AY G E RL ++ +
Sbjct: 270 SGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS 329
Query: 297 SWTTMIDGYVRIAK-----------LDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEA 345
+ +D R+AK + A+ LL++ ++ + +I+ Y++N ++ A
Sbjct: 330 NGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERA 387
Query: 346 NQIFDKIGT-HDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQM 404
+F+++ + HD V W MI GY + G + A LF+++ +KD VTW MI
Sbjct: 388 ETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI--------- 438
Query: 405 DDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSA 464
SG +QNE +A + M + G K +ST + LS+
Sbjct: 439 -----------------------SGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS 475
Query: 465 CAHLAALQLGRQIHHLAIKSG--YVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVI 522
+ L G+ IH + K+ Y DL + NSL++MYAKCG I++A +F D +
Sbjct: 476 AGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV 535
Query: 523 SWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECM 582
SWNS+I G + +G A +A+ LF+EM+ G P+ VTF+GVLSACSH GL+ GL+LF+ M
Sbjct: 536 SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM 595
Query: 583 TEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIK- 641
E Y+I+P ++HY MIDLL RAG+L EA E + + P+ ++G LLG C ++ K
Sbjct: 596 KETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKD 655
Query: 642 ---LGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWI 698
+ A +L EL+P + L N++A GR D +++R M G +K PGCSW+
Sbjct: 656 AEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Query: 699 EVKNQIHTFLSGDPKQCRTAEI 720
V + + FLSGD A++
Sbjct: 716 VVNGRANVFLSGDKSASEAAQM 737
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 1 MKASLKSIGNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNG 60
++ LK + + S + + + L + + I + + + NS++S YAK G
Sbjct: 458 VRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCG 517
Query: 61 RVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMF----RPDLFSWALMIT 116
+ DA ++F +M Q++ VSWNSMI G H+ +A LF +M +P+ ++ +++
Sbjct: 518 AIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLS 577
Query: 117 CYTRKGELEKARELFDLLPN----KEDTACWNAMVAGYAKIGNYNEAKKLLDAMP 167
+ G + + ELF + + + +M+ + G EA++ + A+P
Sbjct: 578 ACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/468 (40%), Positives = 302/468 (64%), Gaps = 1/468 (0%)
Query: 245 RNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQR-GQIEEAARLFIEMPERNPVSWTTMID 303
R+G + A R+F M +N + WN+++ + ++ EA +LF E+PE + S+ M+
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLS 132
Query: 304 GYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVM 363
YVR ++A+ D+MP+K+ A+ MI+GY + M++A ++F + + V WN M
Sbjct: 133 CYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAM 192
Query: 364 IKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSW 423
I GY +CG +++A + F+ + +V W MI GY + ++++ A +F++M +N V+W
Sbjct: 193 ISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252
Query: 424 NALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIK 483
NA+ISG+++N D LK+F M +EG + + S L+ AL C+ L+ALQLGRQIH + K
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 484 SGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKL 543
S ND+ SLI+MY KCG + +A LF+ DV++WN++I+GYA +GNA +A+ L
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 544 FEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLS 603
F EM+ + PD +TF+ VL AC+H GLV+ G+ FE M Y +EP +HY CM+DLL
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLG 432
Query: 604 RAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYAL 663
RAG+L+EA ++++ M +P+A ++GTLLGACR+H+N++L A EKL +L Q + Y
Sbjct: 433 RAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQ 492
Query: 664 LSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGD 711
L+N++A RW++V +VR M+ S K PG SWIE++N++H F S D
Sbjct: 493 LANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSD 540
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 206/404 (50%), Gaps = 45/404 (11%)
Query: 5 LKSIGNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVND 64
L+SIGN + + + + + + Q N +I+ ++G ++
Sbjct: 20 LRSIGNPDTILVESCSSSSCSSPEPSLVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDG 79
Query: 65 ARKLFEQMPQRNLVSWNSMIAGYLHN-DKVKEARELFDKMFRPDLFSWALMITCYTRKGE 123
A ++F M +N ++WNS++ G + ++ EA +LFD++ P
Sbjct: 80 ALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEP----------------- 122
Query: 124 LEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTK 183
DT +N M++ Y + N+ +A+ D MP K+ SWN+M++GY +
Sbjct: 123 ---------------DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYAR 167
Query: 184 NGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGY 243
GEM A + F +M E++ VSWN M+ GY+E DL+ A FF+ P + VV+W M++GY
Sbjct: 168 RGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGY 227
Query: 244 ARNGRMLEARRLFDQMPI-RNVVAWNAMIAAYVQRGQIEEAARLFIEMPER----NPVSW 298
+ ++ A +F M + +N+V WNAMI+ YV+ + E+ +LF M E N
Sbjct: 228 MKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGL 287
Query: 299 TTMIDGYVRIAKLDEARRLLDQMPYK-----NIAAQTAMISGYVQNKRMDEANQIFDKIG 353
++ + G ++ L R+ + Q+ K ++ A T++IS Y + + +A ++F+ +
Sbjct: 288 SSALLGCSELSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 354 THDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDI-VTWNTMIA 396
DVV WN MI GYAQ G D+A+ LFR+M++ I W T +A
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 170/329 (51%), Gaps = 41/329 (12%)
Query: 144 NAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKN-GEMHLASKFFEAMEERDV 202
N ++A + G+ + A ++ M +KN ++WNS+L G +K+ M A + F+ + E D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 203 VSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIR 262
S+N+ML YV + + A FF ++P ++ SW TM++GYAR G M +AR LF M +
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 263 NVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMP 322
N V+WNAMI+ Y++ G +E+A+ F P R V+WT MI GY++ K++ A + M
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 323 Y-KNIAAQTAMISGYVQNKRMDEANQIF-------------------------------- 349
KN+ AMISGYV+N R ++ ++F
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 350 --DKIGTHDVVCWNV-----MIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIR 402
+I + +C +V +I Y +CG + +A LF M KD+V WN MI+GYAQ
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 403 QMDDAVKIFEEMGKRRNTVSWNALISGFL 431
D A+ +F EM + W ++ L
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLL 393
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 200/426 (46%), Gaps = 58/426 (13%)
Query: 29 GRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYL 88
R+ EA ++F ++ + +T +YN M+S Y +N A+ F++MP ++ SWN+MI GY
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 89 HNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVA 148
++++ARELF M + SW MI+ Y G+LEKA F + P + A W AM+
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVA-WTAMIT 225
Query: 149 GYAKIGNYNEAKKLL-DAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV----V 203
GY K A+ + D +KN+V+WN+M+SGY +N K F AM E +
Sbjct: 226 GYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 204 SWNLMLDGYVELDDLDSAWKFFQKIPEQ----NVVSWVTMLSGYARNGRMLEARRLFDQM 259
+ L G EL L + Q + + +V + +++S Y + G + +A +LF+ M
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 260 PIRNVVAWNAMIAAYVQRGQIEEAARLFIEM----------------------------- 290
++VVAWNAMI+ Y Q G ++A LF EM
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM 405
Query: 291 -----------PERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQN 339
E P +T M+D R KL+EA +L+ MP++ AA + G +
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRV 465
Query: 340 KRMDE----ANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMI 395
+ E A + ++ + + + + YA R ++ + ++M ++V +
Sbjct: 466 HKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVK----V 521
Query: 396 AGYAQI 401
GY+ I
Sbjct: 522 PGYSWI 527
Score = 36.2 bits (82), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 488 NDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAIN-GNATEAIKLFEE 546
+ +F N +I + G I A +F + I+WNSL+ G + + EA +LF+E
Sbjct: 59 DQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDE 118
Query: 547 MVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVE--HYACMIDLLSR 604
+ P+P TF + +V V+ FE + P + + MI +R
Sbjct: 119 I------PEPDTFSYNIMLSCYVRNVN-----FEKAQSFFDRMPFKDAASWNTMITGYAR 167
Query: 605 AGRLDEAFEMVKGMKIKPNAGIWGTLLGA 633
G +++A E+ M ++ N W ++
Sbjct: 168 RGEMEKARELFYSM-MEKNEVSWNAMISG 195
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 312/538 (57%), Gaps = 41/538 (7%)
Query: 218 LDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQR 277
+D A + F ++P +V + M++GY R+ R+++A LFD+MP+R+VV+WN+MI+ V+
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 278 GQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYV 337
G + A +LF EMPER+ VSWT M++G R K+D+A RL QMP K+ AA +M+ GY+
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 338 QNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWN----- 392
Q ++D+A ++F ++ +V+ W MI G Q R EA++LF+ M+ I + +
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 393 ----------------------------------TMIAGYAQIRQMDDAVKIFEEMGKRR 418
++I YA +++ D+ K+F+E +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 419 NTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIH 478
V W AL+SG+ N+ H DAL IF M + + ST A L++C+ L L G+++H
Sbjct: 291 VAV-WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 479 HLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNAT 538
+A+K G D FVGNSL+ MY+ G + +A +F ++SWNS+I G A +G
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 539 EAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTE-VYAIEPLVEHYAC 597
A +F +M+ PD +TF G+LSACSH G ++ G KLF M+ + I+ ++HY C
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC 469
Query: 598 MIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQK 657
M+D+L R G+L EA E+++ M +KPN +W LL ACRMH ++ G A + L+ +
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 658 TSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQC 715
++ Y LLSN++A AGRW V K+RV M+ +G K+PG SW+ ++ + H F SGD C
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHC 587
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 219/399 (54%), Gaps = 7/399 (1%)
Query: 270 MIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQ 329
+I ++ +I+EA +F ++P + +T MI GY R +L +A L D+MP +++ +
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 330 TAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIV 389
+MISG V+ M+ A ++FD++ VV W M+ G + G++D+A LF QM KD
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 390 TWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQE 449
WN+M+ GY Q ++DDA+K+F++M +N +SW +I G QNE +AL +F M +
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQM-PGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 450 GKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNA 509
K+ C ++ACA+ A +G Q+H L IK G++ + +V SLIT YA C RI ++
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 510 ELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHV 569
+F + V W +L++GY++N +A+ +F M+ + P+ TF L++CS +
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 570 GLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKI-KPNAGIWG 628
G +D G ++ ++ +E ++ + S +G +++A + +KI K + W
Sbjct: 340 GTLDWGKEMHGVAVKL-GLETDAFVGNSLVVMYSDSGNVNDAVSVF--IKIFKKSIVSWN 396
Query: 629 TLLGACRMHQNIKLGRIAVEKLSEL--EPQKTSCYALLS 665
+++ C H K + ++ L EP + + LLS
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/563 (25%), Positives = 254/563 (45%), Gaps = 106/563 (18%)
Query: 28 SGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGY 87
S R++EA ++F+Q+ + Y MI+ Y ++ R+ DA LF++MP R++VSWNSMI+G
Sbjct: 48 SRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGC 107
Query: 88 LHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMV 147
+ + A +LFD+M + SW M+ R G++++A LF +P K DTA WN+MV
Sbjct: 108 VECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMV 166
Query: 148 AGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNL 207
GY + G ++A KL MP KN++SW +M+ G +N A F+ M + S +
Sbjct: 167 HGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSR 226
Query: 208 MLDGYVELDDLDSAWKFFQKIPEQNVV--------SWV--TMLSGYARNGRMLEARRLFD 257
+ +A F I ++ +V ++++ YA R+ ++R++FD
Sbjct: 227 PFTCVITA--CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD 284
Query: 258 QMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRL 317
+ V W A+++ Y + E+A +F M RN + L
Sbjct: 285 EKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML-RNSI--------------------L 323
Query: 318 LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTH-DVVCWNVMIKGYAQCGRMDEA 376
+Q + + + + K M + + K+G D N ++ Y+ G +++A
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEM---HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 377 INLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFH 436
+++F ++ K IV+WN++I G AQ GK W
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQ-----------HGRGK------W------------- 410
Query: 437 LDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQI-HHLAIKSGYVN-DLFVGN 494
A IF M + K+ D T LSAC+H L+ GR++ ++++ +++ +
Sbjct: 411 --AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYT 468
Query: 495 SLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAP 554
++ + +CG+++ AE +L E MV V P
Sbjct: 469 CMVDILGRCGKLKEAE-------------------------------ELIERMV---VKP 494
Query: 555 DPVTFIGVLSACSHVGLVDGGLK 577
+ + ++ +LSAC VD G K
Sbjct: 495 NEMVWLALLSACRMHSDVDRGEK 517
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 196/432 (45%), Gaps = 53/432 (12%)
Query: 15 VFNQ---------NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDA 65
VFNQ K IT +S R+ +A+ +F +M ++ V++NSMIS + G +N A
Sbjct: 57 VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTA 116
Query: 66 RKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELE 125
KLF++MP+R++VSW +M+ G + KV +A LF +M D +W M+ Y + G+++
Sbjct: 117 VKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVD 176
Query: 126 KARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVS----WNSMLSGY 181
A +LF +P K + W M+ G + EA L M I S + +++
Sbjct: 177 DALKLFKQMPGK-NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 182 TKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLS 241
H+ + ++ + + YV ++++
Sbjct: 236 ANAPAFHMGIQVHGL-----IIKLGFLYEEYVS----------------------ASLIT 268
Query: 242 GYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER----NPVS 297
YA R+ ++R++FD+ V W A+++ Y + E+A +F M N +
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 298 WTTMIDGYVRIAKLD---EARRLLDQMPYKNIA-AQTAMISGYVQNKRMDEANQIFDKIG 353
+ + ++ + LD E + ++ + A +++ Y + +++A +F KI
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 354 THDVVCWNVMIKGYAQCGRMDEAINLFRQMV--NK--DIVTWNTMIAGYAQIRQMDDAVK 409
+V WN +I G AQ GR A +F QM+ NK D +T+ +++ + ++ K
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK 448
Query: 410 IFEEMGKRRNTV 421
+F M N +
Sbjct: 449 LFYYMSSGINHI 460
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 248/810 (30%), Positives = 391/810 (48%), Gaps = 135/810 (16%)
Query: 43 QKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDK 102
++N+ +++ YAK R++DAR++FE + N V W + +GY+ +EA +F++
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 103 M----FRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGN--- 155
M RPD ++ +I Y R G+L+ AR LF + + D WN M++G+ K G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP-DVVAWNVMISGHGKRGCETV 310
Query: 156 -----YNEAKKLLDAMPS-------------------------------KNIVSWNSMLS 179
+N K + + S NI +S++S
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 180 GYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNV----VS 235
Y+K +M A+K FEA+EE++ V WN M+ GY + + F + +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 236 WVTMLSGYARNGRMLEARRLFDQMPI-----RNVVAWNAMIAAYVQRGQIEEAARLFIEM 290
+ ++LS A + LE F + I +N+ NA++ Y + G +E+A ++F M
Sbjct: 431 FTSLLSTCAAS-HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 291 PERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMIS----------GYVQNK 340
+R+ V+W T+I YV+ EA L +M I + A ++ G Q K
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 341 R-----------------------------MDEANQIFDKIGTHDVVCWNVMIKGYAQCG 371
+ + +A ++F + VV N +I GY+Q
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-N 608
Query: 372 RMDEAINLFRQM----VNKDIVTWNTMIAG------------------------------ 397
++EA+ LF++M VN +T+ T++
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 398 ------YAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGK 451
Y R M +A +F E+ ++ V W ++SG QN F+ +ALK + M +G
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 452 KADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAEL 511
D +T L C+ L++L+ GR IH L + D N+LI MYAKCG ++ +
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 512 LFKDA-DPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVG 570
+F + +V+SWNSLI GYA NG A +A+K+F+ M + PD +TF+GVL+ACSH G
Sbjct: 789 VFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Query: 571 LVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTL 630
V G K+FE M Y IE V+H ACM+DLL R G L EA + ++ +KP+A +W +L
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Query: 631 LGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQ 690
LGACR+H + G I+ EKL ELEPQ +S Y LLSN++A G W++ +R M G +
Sbjct: 909 LGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Query: 691 KQPGCSWIEVKNQIHTFLSGDPKQCRTAEI 720
K PG SWI+V+ + H F +GD +I
Sbjct: 969 KVPGYSWIDVEQRTHIFAAGDKSHSEIGKI 998
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 167/721 (23%), Positives = 315/721 (43%), Gaps = 121/721 (16%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARK----LFEQ--M 72
N + K +V A K F + +K+ +NSM+S Y+ G+ + LFE
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 73 P---------------------------------QRNLVSWNSMIAGYLHNDKVKEAREL 99
P +RN +++ Y D++ +AR +
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 100 FDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGNY 156
F+ + P+ W + + Y + G E+A +F+ + + + D + ++ Y ++G
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 157 NEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVE-- 214
+A+ L M S ++V+WN M+SG+ K G +A ++F M + V S L +
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 215 --LDDLDSAWKFFQKIPE----QNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWN 268
+ +LD + + N+ +++S Y++ +M A ++F+ + +N V WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 269 AMIAAYVQRGQIEEAARLFIEMPER----NPVSWTTMIDGYVRIAKLDEARR----LLDQ 320
AMI Y G+ + LF++M + ++T+++ L+ + ++ +
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 321 MPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLF 380
KN+ A++ Y + +++A QIF+++ D V WN +I Y Q EA +LF
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 381 RQM---------------------------------------VNKDIVTWNTMIAGYAQI 401
++M +++D+ T +++I Y++
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 402 RQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACA 461
+ DA K+F + + VS NALI+G+ QN +A+ +F M G T A
Sbjct: 578 GIIKDARKVFSSL-PEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATI 635
Query: 462 LSACAHLAALQLGRQIHHLAIKSGYVND-LFVGNSLITMYAKCGRIQNAELLFKD-ADPV 519
+ AC +L LG Q H K G+ ++ ++G SL+ MY + A LF + + P
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK 695
Query: 520 DVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLF 579
++ W +++G++ NG EA+K ++EM +GV PD TF+ VL CS +
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS----------VL 745
Query: 580 ECMTEVYAIEPLVEHYA---------CMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTL 630
+ E AI L+ H A +ID+ ++ G + + ++ M+ + N W +L
Sbjct: 746 SSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 631 L 631
+
Sbjct: 806 I 806
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 262/568 (46%), Gaps = 54/568 (9%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
S ++ + ++ K ++E A K+F + +KN V +N+MI YA NG + +LF M
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 73 PQRNL----VSWNSMIAGYLHNDKVKEARE----LFDKMFRPDLFSWALMITCYTRKGEL 124
++ S+++ + ++ + + K +LF ++ Y + G L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 125 EKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLS----- 179
E AR++F+ + ++ D WN ++ Y + N +EA L M IVS + L+
Sbjct: 480 EDARQIFERMCDR-DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 180 -----GYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVV 234
G + ++H S + +RD+ + + ++D Y + + A K F +PE +VV
Sbjct: 539 CTHVHGLYQGKQVHCLS--VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 235 SWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQ--------------RGQI 280
S +++GY++N + EA LF +M R V A V+ GQI
Sbjct: 597 SMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 281 EEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPY-KNIAAQTAMISGYVQN 339
+ R F E +S M Y+ + EA L ++ K+I T M+SG+ QN
Sbjct: 656 TK--RGFSSEGEYLGISLLGM---YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 340 KRMDEANQIFDKIGTHDVVCWN--VMIKGYAQCG-----RMDEAIN--LFRQMVNKDIVT 390
+EA + + ++ HD V + + C R AI+ +F + D +T
Sbjct: 711 GFYEEALKFYKEM-RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 391 WNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEG 450
NT+I YA+ M + ++F+EM +R N VSWN+LI+G+ +N + DALKIF M Q
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829
Query: 451 KKADHSTLACALSACAHLAALQLGRQIHHLAI-KSGYVNDLFVGNSLITMYAKCGRIQNA 509
D T L+AC+H + GR+I + I + G + ++ + + G +Q A
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
Query: 510 ELLFKDAD-PVDVISWNSLIAGYAINGN 536
+ + + D W+SL+ I+G+
Sbjct: 890 DDFIEAQNLKPDARLWSSLLGACRIHGD 917
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 218/456 (47%), Gaps = 67/456 (14%)
Query: 248 RMLEARRLFDQMPIR--------------------------------------------- 262
++ ++R++FD+MP R
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 263 -------NVVAWNAMIAAYVQRGQIEEAARLFIEMPER----NPVSWTTMIDGYVRIAKL 311
+V AWN+M++ Y G+ + R F+ + E N +++ ++ R +
Sbjct: 117 QFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNV 176
Query: 312 DEARRLLDQMPY----KNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGY 367
+ R++ M +N A++ Y + R+ +A ++F+ I + VCW + GY
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGY 236
Query: 368 AQCGRMDEAINLFRQMVNK----DIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSW 423
+ G +EA+ +F +M ++ D + + T+I Y ++ ++ DA +F EM + V+W
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-PDVVAW 295
Query: 424 NALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIK 483
N +ISG + A++ F M + K+ STL LSA +A L LG +H AIK
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 484 SGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKL 543
G ++++VG+SL++MY+KC +++ A +F+ + + + WN++I GYA NG + + ++L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 544 FEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLS 603
F +M G D TF +LS C+ ++ G + + + + L A ++D+ +
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA-LVDMYA 474
Query: 604 RAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQN 639
+ G L++A ++ + M + N W T++G+ +N
Sbjct: 475 KCGALEDARQIFERMCDRDNV-TWNTIIGSYVQDEN 509
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 147/340 (43%), Gaps = 52/340 (15%)
Query: 310 KLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQ 369
KL ++R++ D+MP + A I V +K + ++G N ++ YA+
Sbjct: 57 KLFKSRKVFDEMPQR--LALALRIGKAVHSKSLILGIDSEGRLG-------NAIVDLYAK 107
Query: 370 CGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISG 429
C ++ A F + KD+ WN+M++ Y+ I + ++ F + + +
Sbjct: 108 CAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ----------- 155
Query: 430 FLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVND 489
N+F T + LS CA ++ GRQIH IK G +
Sbjct: 156 IFPNKF---------------------TFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 490 LFVGNSLITMYAKCGRIQNAELLFK-DADPVDVISWNSLIAGYAINGNATEAIKLFEEMV 548
+ G +L+ MYAKC RI +A +F+ DP + + W L +GY G EA+ +FE M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDP-NTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 549 MEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRL 608
EG PD + F+ V++ +G + LF M+ P V + MI + G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCE 308
Query: 609 DEAFEMVKGMK---IKPNAGIWGTLLGACRMHQNIKLGRI 645
A E M+ +K G++L A + N+ LG +
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/775 (30%), Positives = 395/775 (50%), Gaps = 71/775 (9%)
Query: 25 LGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQR--NLVSWNS 82
L + G+ A I + +S ++ T ++ YA G +D K+F ++ R ++ WNS
Sbjct: 50 LLRQGKQVHAFLIVNSIS-GDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNS 108
Query: 83 MIAGYLHNDKVKEARELFDKMF----RPDLFSWALMITCYTRKGELEKARELFDLLPN-- 136
+I+ ++ N + +A + KM PD+ ++ ++ + L D + +
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 137 ---KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKF 193
E A ++++ Y + G + KL D + K+ V WN ML+GY K G + K
Sbjct: 169 MDCNEFVA--SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 194 FEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWV--------TMLSGYAR 245
F M + + D + + ++ VVS V ++LS Y++
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 246 NGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER----NPVSWTTM 301
GR +A +LF M + V WN MI+ YVQ G +EE+ F EM + ++++++
Sbjct: 287 CGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 302 IDGYVRIAKLDEARRL----LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDV 357
+ + L+ +++ + +I +A+I Y + + + A IF + + DV
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 358 VCWNVMIKGYAQCGRMDEAINLFRQMVNKDI----VTWNTM------------------- 394
V + MI GY G +++ +FR +V I +T ++
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 395 ----------------IAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLD 438
I YA+ +M+ A +IFE + KR + VSWN++I+ Q++
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSA 525
Query: 439 ALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLIT 498
A+ IF M G D +++ ALSACA+L + G+ IH IK +D++ ++LI
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLID 585
Query: 499 MYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVME-GVAPDPV 557
MYAKCG ++ A +FK +++SWNS+IA +G +++ LF EMV + G+ PD +
Sbjct: 586 MYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 645
Query: 558 TFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKG 617
TF+ ++S+C HVG VD G++ F MTE Y I+P EHYAC++DL RAGRL EA+E VK
Sbjct: 646 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 705
Query: 618 MKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEV 677
M P+AG+WGTLLGACR+H+N++L +A KL +L+P + Y L+SN HA A W+ V
Sbjct: 706 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 765
Query: 678 EKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
KVR M+ QK PG SWIE+ + H F+SGD ++ I + L +L ++R
Sbjct: 766 TKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 170/395 (43%), Gaps = 92/395 (23%)
Query: 18 QNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNL 77
+N ++ K GR ++A K+F MS+ +TVT+N MIS Y ++G + ++ F +M +
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 78 ----VSWNSMIAGYLHNDKVKEARELFDKMFRP----DLFSWALMITCYTRKGELEKARE 129
++++S++ + ++ +++ + R D+F + +I Y + + A+
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 130 LFDLLPNKEDTACWNAMVAGYAKIGNYNEAKK----LLDAMPSKNIVSWNSMLS------ 179
+F N D + AM++GY G Y ++ + L+ S N ++ S+L
Sbjct: 397 IFSQC-NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 180 -----------------------------GYTKNGEMHLASKFFEAMEERDVVSWNLMLD 210
Y K G M+LA + FE + +RD+VSWN M+
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 211 GYVELDDLDSAWKFFQK----------------------IPEQ----------------- 231
+ D+ +A F++ +P +
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS 575
Query: 232 NVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMP 291
+V S T++ YA+ G + A +F M +N+V+WN++IAA G+++++ LF EM
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 292 ER-----NPVSWTTMIDGYVRIAKLDEARRLLDQM 321
E+ + +++ +I + +DE R M
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 147/338 (43%), Gaps = 33/338 (9%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM-- 72
+F + I K V A IFSQ + + V + +MIS Y NG D+ ++F +
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 73 ----PQR-NLVSWNSMIAGYLHNDKVKEAREL----FDKMFRPDLFSWALMITCYTRKGE 123
P LVS +I L +K REL K F +I Y + G
Sbjct: 435 VKISPNEITLVSILPVIGILL---ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 124 LEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNI----VSWNSMLS 179
+ A E+F+ L +K D WN+M+ A+ N + A + M I VS ++ LS
Sbjct: 492 MNLAYEIFERL-SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 550
Query: 180 GYTKNGEMHLASKFFEAMEER----DVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVS 235
M + DV S + ++D Y + +L +A F+ + E+N+VS
Sbjct: 551 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 236 WVTMLSGYARNGRMLEARRLFDQM----PIR-NVVAWNAMIAAYVQRGQIEEAARLFIEM 290
W ++++ +G++ ++ LF +M IR + + + +I++ G ++E R F M
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 291 PERNPVS-----WTTMIDGYVRIAKLDEARRLLDQMPY 323
E + + ++D + R +L EA + MP+
Sbjct: 671 TEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPF 708
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 12 GSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQ 71
S V++++ I K G ++ A+ +F M +KN V++NS+I+A +G++ D+ LF +
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 72 MPQR-----NLVSWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRK 121
M ++ + +++ +I+ H V E F M +P +A ++ + R
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRA 693
Query: 122 GELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAK----KLLDAMPSKNIVSWNSM 177
G L +A E +P D W ++ N A+ KL+D PS + + +
Sbjct: 694 GRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS--GYYVL 751
Query: 178 LSGYTKNG-EMHLASKFFEAMEERDV 202
+S N E +K M+ER+V
Sbjct: 752 ISNAHANAREWESVTKVRSLMKEREV 777
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 40/261 (15%)
Query: 458 LACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFK--D 515
L+ L AC++ L+ G+Q+H I + D + ++ MYA CG + +F D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 516 ADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGG 575
+ WNS+I+ + NG +A+ + +M+ GV+PD TF ++ AC + G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 576 LKLFECMTEV------YAIEPLVEHYA------------------------CMIDLLSRA 605
L + ++ + + L++ Y M++ ++
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 606 GRLD---EAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKL---SELEPQKTS 659
G LD + F +++ +I PNA + +L C I LG + + L S ++ + +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG-VQLHGLVVVSGVDFEGSI 276
Query: 660 CYALLSNMHAEAGRWDEVEKV 680
+LLS M+++ GR+D+ K+
Sbjct: 277 KNSLLS-MYSKCGRFDDASKL 296
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 233/758 (30%), Positives = 393/758 (51%), Gaps = 65/758 (8%)
Query: 36 KIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKE 95
+I Q + +TV N +I Y++NG V+ AR++F+ + ++ SW +MI+G N+ E
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAE 271
Query: 96 ARELFDKMF----RPDLFSWALMITCYTRKGELEKARELFDL---LPNKEDTACWNAMVA 148
A LF M+ P ++++ +++ + LE +L L L DT NA+V+
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 149 GYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----ERDVVS 204
Y +GN A+ + M ++ V++N++++G ++ G A + F+ M E D +
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 205 WNLML-----DGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQM 259
++ DG + A+ N + +L+ YA+ + A F +
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCADIETALDYFLET 450
Query: 260 PIRNVVAWNAMIAAYVQRGQIEEAARLF----IEMPERNPVSWTTMIDGYVRIAKLDEAR 315
+ NVV WN M+ AY + + R+F IE N ++ +++ +R+ L+
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 316 RLLDQMPYKNIAAQ----TAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCG 371
++ Q+ N + +I Y + ++D A I + DVV W MI GY Q
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 372 RMDEAINLFRQMVNK---------------------------------------DIVTWN 392
D+A+ FRQM+++ D+ N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 393 TMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKK 452
++ Y++ +++++ FE+ N ++WNAL+SGF Q+ + +AL++FV M +EG
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 453 ADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELL 512
++ T A+ A + A ++ G+Q+H + K+GY ++ V N+LI+MYAKCG I +AE
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 513 FKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLV 572
F + + +SWN++I Y+ +G +EA+ F++M+ V P+ VT +GVLSACSH+GLV
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 809
Query: 573 DGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLG 632
D G+ FE M Y + P EHY C++D+L+RAG L A E ++ M IKP+A +W TLL
Sbjct: 810 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLS 869
Query: 633 ACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQ 692
AC +H+N+++G A L ELEP+ ++ Y LLSN++A + +WD + R M+ G +K+
Sbjct: 870 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKE 929
Query: 693 PGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQ 730
PG SWIEVKN IH+F GD EI + L +
Sbjct: 930 PGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR 967
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 195/429 (45%), Gaps = 66/429 (15%)
Query: 243 YARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN-------- 294
Y G + A ++FD+MP R + WN MI R I E LF+ M N
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 295 --------------------------------PVSWTTMIDGYVRIAKLDEARRLLDQMP 322
V +ID Y R +D ARR+ D +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 323 YKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYA------QCGRMDEA 376
K+ ++ AMISG +N+ EA ++F D+ +M YA C ++ E+
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLF-----CDMYVLGIMPTPYAFSSVLSACKKI-ES 303
Query: 377 INLFRQM--------VNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALIS 428
+ + Q+ + D N +++ Y + + A IF M + R+ V++N LI+
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLIN 362
Query: 429 GFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVN 488
G Q + A+++F M +G + D +TLA + AC+ L G+Q+H K G+ +
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 489 DLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMV 548
+ + +L+ +YAKC I+ A F + + +V+ WN ++ Y + + + ++F +M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 549 MEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYAC--MIDLLSRAG 606
+E + P+ T+ +L C +G ++ G ++ +++ + Y C +ID+ ++ G
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 607 RLDEAFEMV 615
+LD A++++
Sbjct: 540 KLDTAWDIL 548
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 35/262 (13%)
Query: 407 AVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSAC- 465
A K+F+EM R +WN +I + +FV M E + T + L AC
Sbjct: 139 AFKVFDEM-PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 466 AHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWN 525
A + QIH + G + V N LI +Y++ G + A +F D SW
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 526 SLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECM--- 582
++I+G + N EAI+LF +M + G+ P P F VLSAC + ++ G +L +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 583 ---TEVYAIEPLV------------EH------------YACMIDLLSRAGRLDEAFEMV 615
++ Y LV EH Y +I+ LS+ G ++A E+
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 616 KGMK---IKPNAGIWGTLLGAC 634
K M ++P++ +L+ AC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVAC 399
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 144/316 (45%), Gaps = 38/316 (12%)
Query: 18 QNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNL 77
QN +T + G++EE+ F Q + + +N+++S + ++G +A ++F +M + +
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 78 VSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNK 137
+ N + VK A E T ++G ++ +
Sbjct: 689 DNNN-----FTFGSAVKAASE-----------------TANMKQG--KQVHAVITKTGYD 724
Query: 138 EDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAM 197
+T NA+++ YAK G+ ++A+K + +KN VSWN++++ Y+K+G A F+ M
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Query: 198 EERDVVSWNLMLDGYV----ELDDLDSAWKFFQKIPEQNVVS-----WVTMLSGYARNGR 248
+V ++ L G + + +D +F+ + + +S +V ++ R G
Sbjct: 785 IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGL 844
Query: 249 MLEARRLFDQMPIR-NVVAWNAMIAAYVQRGQI---EEAARLFIEMPERNPVSWTTMIDG 304
+ A+ +MPI+ + + W +++A V + E AA +E+ + ++ + +
Sbjct: 845 LSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNL 904
Query: 305 YVRIAKLDEARRLLDQ 320
Y K D AR L Q
Sbjct: 905 YAVSKKWD-ARDLTRQ 919
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 13/182 (7%)
Query: 450 GKKADHSTLACALSACAHL-AALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQN 508
G + +H TL L C +L GR++H +K G ++ + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 509 AELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSH 568
A +F + + +WN +I A E LF MV E V P+ TF GVL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR- 197
Query: 569 VGLVDGGLKLFECMTEVYA---IEPLVEHYAC---MIDLLSRAGRLDEAFEMVKGMKIKP 622
GG F+ + +++A + L + +IDL SR G +D A + G+++K
Sbjct: 198 -----GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 623 NA 624
++
Sbjct: 253 HS 254
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/643 (35%), Positives = 363/643 (56%), Gaps = 58/643 (9%)
Query: 144 NAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVV 203
N ++ Y+K G A+KL D MP + SWN++LS Y+K G+M +FF+ + +RD V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 204 SWNLMLDGYVELDDLDSAWKFFQKI------PEQ----NVVSWV---------------- 237
SW M+ GY + A + + P Q NV++ V
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 238 -------------TMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAA 284
++L+ YA+ G + A+ +FD+M +R++ +WNAMIA ++Q GQ++ A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 285 RLFIEMPERNPVSWTTMIDGYVR----IAKLDEARRLL-DQMPYKNIAAQTAMISGYVQN 339
F +M ER+ V+W +MI G+ + + LD ++L D + + +++S
Sbjct: 233 AQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Query: 340 KRMDEANQIFDKIGT--HDV--VCWNVMIKGYAQCGRMDEAINLFRQMVNKD--IVTWNT 393
+++ QI I T D+ + N +I Y++CG ++ A L Q KD I +
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 394 MIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKA 453
++ GY ++ M+ A IF + K R+ V+W A+I G+ Q+ + +A+ +F M G++
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSL-KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 454 DHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLF 513
+ TLA LS + LA+L G+QIH A+KSG + + V N+LITMYAK G I +A F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 514 KDADPV----DVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHV 569
D + D +SW S+I A +G+A EA++LFE M+MEG+ PD +T++GV SAC+H
Sbjct: 472 ---DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 528
Query: 570 GLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGT 629
GLV+ G + F+ M +V I P + HYACM+DL RAG L EA E ++ M I+P+ WG+
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 630 LLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGA 689
LL ACR+H+NI LG++A E+L LEP+ + Y+ L+N+++ G+W+E K+R SM+
Sbjct: 589 LLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Query: 690 QKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
+K+ G SWIEVK+++H F D EI T+K + +I+
Sbjct: 649 KKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/551 (24%), Positives = 266/551 (48%), Gaps = 30/551 (5%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
V+ N + K+G A K+F +M + ++N+++SAY+K G ++ + F+Q+PQ
Sbjct: 49 VYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQ 108
Query: 75 RNLVSWNSMIAGYLHNDKVKEARELFDKMFR----PDLFSWALMITCYTRKGELEKAREL 130
R+ VSW +MI GY + + +A + M + P F+ ++ +E +++
Sbjct: 109 RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV 168
Query: 131 FDLLPN---KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEM 187
+ + + + N+++ YAK G+ AK + D M ++I SWN+M++ + + G+M
Sbjct: 169 HSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 228
Query: 188 HLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVS-----WVTMLSG 242
LA FE M ERD+V+WN M+ G+ + A F K+ +++S ++LS
Sbjct: 229 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 243 YARNGRMLEARRLFDQMPIRNV----VAWNAMIAAYVQRGQIEEAARLFIEMPERNPV-- 296
A ++ +++ + + NA+I+ Y + G +E A RL + ++
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 297 SWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKI--GT 354
+T ++DGY+++ +++A+ + + +++ A TAMI GY Q+ EA +F + G
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 355 HDVVCWNV--MIKGYAQCGRMDEAINLFRQMVNK----DIVTWNTMIAGYAQIRQMDDAV 408
+ + M+ + + + V + N +I YA+ + A
Sbjct: 409 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 468
Query: 409 KIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHL 468
+ F+ + R+TVSW ++I Q+ +AL++F M EG + DH T SAC H
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 528
Query: 469 AALQLGRQIHHLAIK-SGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPV--DVISWN 525
+ GRQ + + L ++ ++ + G +Q A+ F + P+ DV++W
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ-EFIEKMPIEPDVVTWG 587
Query: 526 SLIAGYAINGN 536
SL++ ++ N
Sbjct: 588 SLLSACRVHKN 598
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 226/526 (42%), Gaps = 110/526 (20%)
Query: 263 NVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMP 322
+V N ++ Y + G A +LF EMP R SW T++ Y + +D DQ+P
Sbjct: 48 SVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP 107
Query: 323 YKNIAAQTAMISGY-----------------------------------VQNKRMDEANQ 347
++ + T MI GY + M+ +
Sbjct: 108 QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKK 167
Query: 348 IFD---KIGTH-DVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQ 403
+ K+G +V N ++ YA+CG A +F +MV +DI +WN MIA + Q+ Q
Sbjct: 168 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 404 MDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEG-KKADHSTLACAL 462
MD A+ FE+M + R+ V+WN++ISGF Q + L AL IF M ++ D TLA L
Sbjct: 228 MDLAMAQFEQMAE-RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286
Query: 463 SACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELL---------- 512
SACA+L L +G+QIH + +G+ V N+LI+MY++CG ++ A L
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346
Query: 513 -----------------------FKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVM 549
F DV++W ++I GY +G+ EAI LF MV
Sbjct: 347 IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG 406
Query: 550 EGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMT---EVYAIE---PLVEHYA------- 596
G P+ T +LS S + + G ++ E+Y++ L+ YA
Sbjct: 407 GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITS 466
Query: 597 ------------------CMIDLLSRAGRLDEAFEMVKGM---KIKPNAGIWGTLLGACR 635
MI L++ G +EA E+ + M ++P+ + + AC
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 636 MHQNIKLGRIAVEKLSELEP--QKTSCYALLSNMHAEAGRWDEVEK 679
+ GR + + +++ S YA + ++ AG E ++
Sbjct: 527 HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 146/329 (44%), Gaps = 56/329 (17%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVT--YNSMISAYAKNGRVNDARKLFEQMPQRN 76
N I+ + G VE A ++ Q K+ + +++ Y K G +N A+ +F + R+
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 77 LVSWNSMIAGYLHNDKVKEARELFDKMF----RPDLFSWALM------------------ 114
+V+W +MI GY + EA LF M RP+ ++ A M
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 115 -----------------ITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYN 157
IT Y + G + A FDL+ + DT W +M+ A+ G+
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 158 EAKKLLDAMPSKNI----VSWNSMLSGYTKNGEMHLASKFFEAMEERDVV-----SWNLM 208
EA +L + M + + +++ + S T G ++ ++F+ M++ D + + M
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 209 LDGYVELDDLDSAWKFFQKIP-EQNVVSWVTMLSGYARNGRM----LEARRLFDQMPIRN 263
+D + L A +F +K+P E +VV+W ++LS + + + A RL P N
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP-EN 616
Query: 264 VVAWNAMIAAYVQRGQIEEAARLFIEMPE 292
A++A+ Y G+ EEAA++ M +
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKD 645
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 477 IHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGN 536
+H IKSG + +++ N+L+ +Y+K G +A LF + SWN++++ Y+ G+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 537 AT-------------------------------EAIKLFEEMVMEGVAPDPVTFIGVLSA 565
+AI++ +MV EG+ P T VL++
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 566 CSHVGLVDGGLKL 578
+ ++ G K+
Sbjct: 156 VAATRCMETGKKV 168
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/780 (29%), Positives = 381/780 (48%), Gaps = 118/780 (15%)
Query: 45 NTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMF 104
+T N +I+ Y++ G + ARK+FE+MP+RNLVSW++M++ H+ +E+ +F + +
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 105 RP------------------------------------------DLFSWALMITCYTRKG 122
R D++ L+I Y + G
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 123 ELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYT 182
++ AR +FD LP K T W M++G K+G + +L + N+V +LS
Sbjct: 198 NIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 183 K--------NGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVV 234
G + + E D N+++D YV+ + +A K F +P +N++
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 235 SWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN 294
SW T+LSGY +N EA LF M + + + + + + +
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSM------------SKFGLKPDMYACSSILTSCASLH 364
Query: 295 PVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGT 354
+ + T + Y A L + ++I Y + + +A ++FD
Sbjct: 365 ALGFGTQVHAYTIKANLG-----------NDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 355 HDVVCWNVMIKGYAQCG---RMDEAINLFRQM---------------------------- 383
DVV +N MI+GY++ G + EA+N+FR M
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 384 -----------VNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQ 432
+N DI + +I Y+ + D+ +F+EM K ++ V WN++ +G++Q
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQ 532
Query: 433 NEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFV 492
+ +AL +F+ + ++ D T A ++A +LA++QLG++ H +K G + ++
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYI 592
Query: 493 GNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGV 552
N+L+ MYAKCG ++A F A DV+ WNS+I+ YA +G +A+++ E+M+ EG+
Sbjct: 593 TNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGI 652
Query: 553 APDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAF 612
P+ +TF+GVLSACSH GLV+ GLK FE M + IEP EHY CM+ LL RAGRL++A
Sbjct: 653 EPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKAR 711
Query: 613 EMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAG 672
E+++ M KP A +W +LL C N++L A E +P+ + + +LSN++A G
Sbjct: 712 ELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKG 771
Query: 673 RWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
W E +KVR M+ G K+PG SWI + ++H FLS D C+ +I L L QIR
Sbjct: 772 MWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 36/350 (10%)
Query: 9 GNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNG---RVNDA 65
N G+ + N I K + +A K+F + + V +N+MI Y++ G +++A
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 66 RKLFEQMPQR----NLVSWNSMIAGYLHNDKVKEARELFDKMFRP----DLFSWALMITC 117
+F M R +L+++ S++ + ++++ MF+ D+F+ + +I
Sbjct: 439 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 498
Query: 118 YTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLL----------DAMP 167
Y+ L+ +R +FD + K D WN+M AGY + EA L D
Sbjct: 499 YSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 168 SKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQK 227
N+V+ L+ E H + + E + N +LD Y + + A K F
Sbjct: 558 FANMVTAAGNLASVQLGQEFH--CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS 615
Query: 228 IPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIR----NVVAWNAMIAAYVQRGQIEEA 283
++VV W +++S YA +G +A ++ ++M N + + +++A G +E+
Sbjct: 616 AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG 675
Query: 284 ARLFIEM------PERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIA 327
+ F M PE + M+ R +L++AR L+++MP K A
Sbjct: 676 LKQFELMLRFGIEPETE--HYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/749 (30%), Positives = 396/749 (52%), Gaps = 66/749 (8%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
V + N ++ + +SG +E A+K+ +S K + ++ S D++ L +
Sbjct: 61 VTDANTQLRRFCESGNLENAVKLLC-VSGKWDIDPRTLCSVLQ---LCADSKSLKDGKEV 116
Query: 75 RNLVSWNSMIAG----------YLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGEL 124
N + N + Y + +KEA +FD++ W +++ + G+
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 125 EKARELFDLLPN---KEDTACWNAMVAGYAKIGNYNEAKKLL-----DAMPSKNIVSWNS 176
+ LF + + + D+ ++ + ++ + + + ++L +N V NS
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NS 235
Query: 177 MLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKI----PEQN 232
+++ Y KN + A K F+ M ERDV+SWN +++GYV + F ++ E +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 233 VVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVA-----WNAMIAAYVQRGQIEEAARLF 287
+ + V++ +G A + R++ R + ++ + N ++ Y + G ++ A +F
Sbjct: 296 LATIVSVFAGCA-DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 288 IEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQ----TAMISGYVQNKRMD 343
EM +R+ VS+T+MI GY R EA +L ++M + I+ TA+++ + + +D
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 344 EANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQ 403
E ++ + I +D+ G+ DI N ++ YA+
Sbjct: 415 EGKRVHEWIKENDL--------GF-------------------DIFVSNALMDMYAKCGS 447
Query: 404 MDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGK-KADHSTLACAL 462
M +A +F EM + ++ +SWN +I G+ +N + +AL +F L+ +E + D T+AC L
Sbjct: 448 MQEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 463 SACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVI 522
ACA L+A GR+IH +++GY +D V NSL+ MYAKCG + A +LF D D++
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 523 SWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECM 582
SW +IAGY ++G EAI LF +M G+ D ++F+ +L ACSH GLVD G + F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 583 TEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKL 642
IEP VEHYAC++D+L+R G L +A+ ++ M I P+A IWG LL CR+H ++KL
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 643 GRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKN 702
EK+ ELEP+ T Y L++N++AEA +W++V+++R + G +K PGCSWIE+K
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 703 QIHTFLSGDPKQCRTAEICNTLKTLAAQI 731
+++ F++GD T I L+ + A++
Sbjct: 747 RVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 42/331 (12%)
Query: 12 GSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQ 71
G +F N + K G ++EA +FS+M K+ +++N++I Y+KN N+A LF
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-- 486
Query: 72 MPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELF 131
NL+ L +K F PD + A ++ +K RE+
Sbjct: 487 ----NLL--------------------LEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 132 DLLPNK---EDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMH 188
+ D N++V YAK G A L D + SK++VSW M++GY +G
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 189 LASKFFEAME----ERDVVSWNLMLDGYVELDDLDSAWKFFQKIP-----EQNVVSWVTM 239
A F M E D +S+ +L +D W+FF + E V + +
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 240 LSGYARNGRMLEARRLFDQMPI-RNVVAWNAMIAAYVQRGQI---EEAARLFIEMPERNP 295
+ AR G +++A R + MPI + W A++ + E+ A E+ N
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENT 702
Query: 296 VSWTTMIDGYVRIAKLDEARRLLDQMPYKNI 326
+ M + Y K ++ +RL ++ + +
Sbjct: 703 GYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Query: 406 DAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGK-KADHSTLACALSA 464
D++ F+ NT SG L+N A+K L+ GK D TL L
Sbjct: 52 DSITTFDRSVTDANTQLRRFCESGNLEN-----AVK---LLCVSGKWDIDPRTLCSVLQL 103
Query: 465 CAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISW 524
CA +L+ G+++ + +G+V D +G+ L MY CG ++ A +F + + W
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 525 NSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKL 578
N L+ A +G+ + +I LF++M+ GV D TF V + S + V GG +L
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 217
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/643 (33%), Positives = 340/643 (52%), Gaps = 55/643 (8%)
Query: 144 NAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME--ERD 201
N ++ Y K N A++L D + + ++ +M+SGY +G++ LA FE RD
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 202 VVSWNLMLDGYVELDDLDSAWKFFQKIPEQNV----VSWVTMLSGYARNGRMLEARRLFD 257
V +N M+ G+ +D SA F K+ + ++ ++L+G A + F
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 258 QMPIRNVVAW-----NAMIAAYVQRGQ----IEEAARLFIEMPERNPVSWTTMIDGYVRI 308
+++ + NA+++ Y + + A ++F E+ E++ SWTTM+ GYV+
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 309 AKLDEARRLLDQMPYK-NIAAQTAMISGYVQN----------KRMDEANQIFDKIGTHDV 357
D LL+ M + A AMISGYV +RM + D+ V
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 358 V--CW--------------------------NVMIKGYAQCGRMDEAINLFRQMVNKDIV 389
+ C N ++ Y +CG+ DEA +F +M KD+V
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 390 TWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQE 449
+WN +++GY + +A IF+EM K +N +SW +ISG +N F + LK+F M +E
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEM-KEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
Query: 450 GKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNA 509
G + + A+ +CA L A G+Q H +K G+ + L GN+LITMYAKCG ++ A
Sbjct: 412 GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 510 ELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHV 569
+F+ +D +SWN+LIA +G+ EA+ ++EEM+ +G+ PD +T + VL+ACSH
Sbjct: 472 RQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHA 531
Query: 570 GLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGT 629
GLVD G K F+ M VY I P +HYA +IDLL R+G+ +A +++ + KP A IW
Sbjct: 532 GLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEA 591
Query: 630 LLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGA 689
LL CR+H N++LG IA +KL L P+ Y LLSNMHA G+W+EV +VR M G
Sbjct: 592 LLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGV 651
Query: 690 QKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
+K+ CSWIE++ Q+HTFL D + L+ L ++R
Sbjct: 652 KKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 156/590 (26%), Positives = 268/590 (45%), Gaps = 113/590 (19%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMP--QRN 76
N+ I KS + A ++F ++S+ + + +M+S Y +G + AR +FE+ P R+
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 77 LVSWNSMIAGYLHNDKVKEARELFDKM----FRPDLFSWALMITCYTRKGELEKARELFD 132
V +N+MI G+ HN+ A LF KM F+PD F++A ++ + EK F
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 133 LLPNKED----TACWNAMVAGYAKIGN----YNEAKKLLDAMPSKNIVSWNSMLSGYTKN 184
K T+ NA+V+ Y+K + + A+K+ D + K+ SW +M++GY KN
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 185 GEMHLASKFFEAMEER-DVVSWNLMLDGYVELDDLDSAWKFFQKIPE------------- 230
G L + E M++ +V++N M+ GYV A + +++
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 231 -------------QNVVSWV------------TMLSGYARNGRMLEARRLFDQMPIRNVV 265
+ V ++V +++S Y + G+ EAR +F++MP +++V
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 266 AWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKN 325
+WNA+++ YV G I EA +F EM E+N +SW MI G +E +L M +
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 326 I---------AAQTAMISGYVQNKRMDEANQIFDKIG-THDVVCWNVMIKGYAQCGRMDE 375
A ++ + G N + A + KIG + N +I YA+CG ++E
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL--KIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 376 AINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEF 435
A +FR M D V+WN +IA Q +AV ++EEM K+
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK------------------ 512
Query: 436 HLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYV----NDLF 491
G + D TL L+AC+H + GR+ + ++++ Y D +
Sbjct: 513 --------------GIRPDRITLLTVLTACSHAGLVDQGRK-YFDSMETVYRIPPGADHY 557
Query: 492 VGNSLITMYAKCGRIQNAE-----LLFKDADPVDVISWNSLIAGYAINGN 536
LI + + G+ +AE L FK + W +L++G ++GN
Sbjct: 558 A--RLIDLLCRSGKFSDAESVIESLPFKPTAEI----WEALLSGCRVHGN 601
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 148/304 (48%), Gaps = 24/304 (7%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
S+ F+ N ++ K G+ +EA IF +M K+ V++N+++S Y +G + +A+ +F++M
Sbjct: 319 SFHFD-NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 73 PQRNLVSWNSMIAGYLHNDKVKEARELFDKM----FRPDLFSWALMI-TCYTRKGELEKA 127
++N++SW MI+G N +E +LF M F P ++++ I +C
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 128 RELFDLLPNKEDT--ACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNG 185
+ LL D+ + NA++ YAK G EA+++ MP + VSWN++++ ++G
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 186 EMHLASKFFEAMEER----DVVSWNLMLDGYVELDDLDSAWKFFQ------KIPEQNVVS 235
A +E M ++ D ++ +L +D K+F +IP
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP-PGADH 556
Query: 236 WVTMLSGYARNGRMLEARRLFDQMPIRNVVA-WNAMIAAYVQRGQIE----EAARLFIEM 290
+ ++ R+G+ +A + + +P + W A+++ G +E A +LF +
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 291 PERN 294
PE +
Sbjct: 617 PEHD 620
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 33/133 (24%)
Query: 470 ALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIA 529
+LQL R +H I G+ + N LI +Y K + A LF + D I+ ++++
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 530 GYAINGNAT---------------------------------EAIKLFEEMVMEGVAPDP 556
GY +G+ T AI LF +M EG PD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 557 VTFIGVLSACSHV 569
TF VL+ + V
Sbjct: 149 FTFASVLAGLALV 161
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/778 (29%), Positives = 397/778 (51%), Gaps = 83/778 (10%)
Query: 37 IFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEA 96
+F +M ++ V++N MI+ Y+K+ + A F MP R++VSWNSM++GYL N + ++
Sbjct: 105 VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164
Query: 97 RELFDKMFRPDL------FSWALMITCYTRKGELE-KARELFDLLPNKEDTACWNAMVAG 149
E+F M R + F+ L + + L + + + D +A++
Sbjct: 165 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDM 224
Query: 150 YAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV-VSWNL- 207
YAK + E+ ++ +P KN VSW+++++G +N + LA KFF+ M++ + VS ++
Sbjct: 225 YAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 284
Query: 208 --MLDGYVELDDLD-----SAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMP 260
+L L +L A +V T L YA+ M +A+ LFD
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT-LDMYAKCDNMQDAQILFDNSE 343
Query: 261 IRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER----NPVSWTTMIDGYVRIAKLDEARR 316
N ++NAMI Y Q +A LF + + +S + + + L E +
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 317 L----LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGR 372
+ + ++ A I Y + + + EA ++FD++ D V WN +I + Q G+
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 373 MDEAINLF----RQMVNKDIVTWNTMIAG------------------------------- 397
E + LF R + D T+ +++
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 398 ---YAQIRQMDDAVKIFEEMGKRRNT-------------------VSWNALISGFLQNEF 435
Y++ +++A KI +R N VSWN++ISG++ E
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 436 HLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNS 495
DA +F M + G D T A L CA+LA+ LG+QIH IK +D+++ ++
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643
Query: 496 LITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPD 555
L+ MY+KCG + ++ L+F+ + D ++WN++I GYA +G EAI+LFE M++E + P+
Sbjct: 644 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 703
Query: 556 PVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMV 615
VTFI +L AC+H+GL+D GL+ F M Y ++P + HY+ M+D+L ++G++ A E++
Sbjct: 704 HVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 763
Query: 616 KGMKIKPNAGIWGTLLGACRMHQ-NIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRW 674
+ M + + IW TLLG C +H+ N+++ A L L+PQ +S Y LLSN++A+AG W
Sbjct: 764 REMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMW 823
Query: 675 DEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
++V +R +M G +K+PGCSW+E+K+++H FL GD R EI L + ++++
Sbjct: 824 EKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 169/637 (26%), Positives = 277/637 (43%), Gaps = 141/637 (22%)
Query: 137 KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEA 196
+ T N ++ Y ++ A + D MP +++VSWN M++GY+K+ +M A+ FF
Sbjct: 80 RPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNM 139
Query: 197 MEERDVVSWNLMLDGY--------------------VELDDLDSA-----WKFFQKIP-- 229
M RDVVSWN ML GY +E D A F +
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 230 ------------EQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQR 277
+ +VV+ +L YA+ R +E+ R+F +P +N V+W+A+IA VQ
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN 259
Query: 278 GQIEEAARLFIEMPERNP-VSWTTM-----------------------------IDGYVR 307
+ A + F EM + N VS + DG VR
Sbjct: 260 NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR 319
Query: 308 IAKLD---------EARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGT---- 354
A LD +A+ L D N + AMI+GY Q + +A +F ++ +
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379
Query: 355 HDVVCWNVMIKGYAQCGRMDEAINLF----RQMVNKDIVTWNTMIAGYAQIRQMDDAVKI 410
D + + + + A + E + ++ + ++ D+ N I Y + + + +A ++
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 411 FEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAA 470
F+EM +RR+ VSWNA+I+ QN + L +FV M + + D T L AC +
Sbjct: 440 FDEM-RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GS 497
Query: 471 LQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELL----FKDADPVDV----- 521
L G +IH +KSG ++ VG SLI MY+KCG I+ AE + F+ A+
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 557
Query: 522 -----------ISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVG 570
+SWNS+I+GY + + +A LF M+ G+ PD T+ VL C+++
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 571 LVDGGLKLF------ECMTEVYAIEPLVEHYA------------------------CMID 600
G ++ E ++VY LV+ Y+ MI
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 601 LLSRAGRLDEAFEMVKGM---KIKPNAGIWGTLLGAC 634
+ G+ +EA ++ + M IKPN + ++L AC
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRAC 714
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/549 (24%), Positives = 249/549 (45%), Gaps = 57/549 (10%)
Query: 150 YAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAM----EERDVVSW 205
Y ++ +++ L+ + S + +++ + K G + L + M
Sbjct: 27 YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVL 86
Query: 206 NLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVV 265
N +L Y D SA F K+P ++VVSW M++GY+++ M +A F+ MP+R+VV
Sbjct: 87 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 266 AWNAMIAAYVQRGQIEEAARLFIEMP---------------------------------- 291
+WN+M++ Y+Q G+ ++ +F++M
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 292 -----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEAN 346
+ + V+ + ++D Y + + E+ R+ +P KN + +A+I+G VQN + A
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 347 QIFDKIGTHDV-VCWNVMIKGYAQCGRMDE-------AINLFRQMVNKDIVTWNTMIAGY 398
+ F ++ + V ++ C + E + + D + + Y
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 399 AQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTL 458
A+ M DA +F+ + N S+NA+I+G+ Q E AL +F + G D +L
Sbjct: 327 AKCDNMQDAQILFDN-SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 459 ACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADP 518
+ ACA + L G QI+ LAIKS D+ V N+ I MY KC + A +F +
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 519 VDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKL 578
D +SWN++IA + NG E + LF M+ + PD TF +L AC+ G + G+++
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEI 504
Query: 579 FECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQ 638
+ + + +ID+ S+ G ++EA ++ + A + GT+ +MH
Sbjct: 505 HSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKIHS--RFFQRANVSGTMEELEKMH- 560
Query: 639 NIKLGRIAV 647
N +L + V
Sbjct: 561 NKRLQEMCV 569
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 226/453 (49%), Gaps = 26/453 (5%)
Query: 200 RDVVSWNLMLD---GYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLF 256
R VVS+N L Y + F ++ + ++ + A+ G + ++
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAH 71
Query: 257 DQMPIR----NVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLD 312
M I N ++ Y A+ +F +MP R+ VSW MI+GY + +
Sbjct: 72 AHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMF 131
Query: 313 EARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTH----DVVCWNVMIK--G 366
+A + MP +++ + +M+SGY+QN ++ ++F +G D + +++K
Sbjct: 132 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 191
Query: 367 YAQCGRMDEAIN--LFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWN 424
+ + + I+ + R + D+V + ++ YA+ ++ +++++F+ + +N+VSW+
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI-PEKNSVSWS 250
Query: 425 ALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKS 484
A+I+G +QN ALK F M + S A L +CA L+ L+LG Q+H A+KS
Sbjct: 251 AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310
Query: 485 GYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLF 544
+ D V + + MYAKC +Q+A++LF +++ ++ S+N++I GY+ + +A+ LF
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 370
Query: 545 EEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACM----ID 600
++ G+ D ++ GV AC+ V + GL+++ AI+ + C+ ID
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG-----LAIKSSLSLDVCVANAAID 425
Query: 601 LLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGA 633
+ + L EAF + M+ + +A W ++ A
Sbjct: 426 MYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/612 (32%), Positives = 339/612 (55%), Gaps = 23/612 (3%)
Query: 146 MVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSW 205
++A Y+ +N+A +L ++P I S++S++ TK + F M ++
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 206 NLMLDGYVELDDLDSAWKFFQKIPEQNVVSWV--------TMLSGYARNGRMLEARRLFD 257
+ +L ++ SA+K ++I + VS + +M Y R GRM +AR++FD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 258 QMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMP----ERNPVSWTTMIDGYVRIAKLDE 313
+M ++VV +A++ AY ++G +EE R+ EM E N VSW ++ G+ R E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 314 ARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTH--------DVVCWNVMIK 365
A + ++ + +S + + E + I + D + MI
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 366 GYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFE---EMGKRRNTVS 422
Y + G + I+LF Q + N I G ++ +D A+++FE E N VS
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 423 WNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAI 482
W ++I+G QN ++AL++F M G K +H T+ L AC ++AAL GR H A+
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 483 KSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIK 542
+ ++++ VG++LI MYAKCGRI ++++F +++ WNSL+ G++++G A E +
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 543 LFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLL 602
+FE ++ + PD ++F +LSAC VGL D G K F+ M+E Y I+P +EHY+CM++LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 603 SRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYA 662
RAG+L EA++++K M +P++ +WG LL +CR+ N+ L IA EKL LEP+ Y
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 663 LLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICN 722
LLSN++A G W EV+ +R ME G +K PGCSWI+VKN+++T L+GD + +I
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITE 655
Query: 723 TLKTLAAQIRNT 734
+ ++ ++R +
Sbjct: 656 KMDEISKEMRKS 667
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 188/425 (44%), Gaps = 83/425 (19%)
Query: 16 FNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMP-- 73
F Q + GR+ +A K+F +MS K+ VT ++++ AYA+ G + + ++ +M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 74 --QRNLVSWNSMIAGYLHNDKVKEARELFDKM----FRPDLFSWALMITCYTRKGELEKA 127
+ N+VSWN +++G+ + KEA +F K+ F PD + + ++ L
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 128 RELFDLLPNK---EDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKN 184
R + + + +D +AM+ Y K G+ L + N+ ++G ++N
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 185 GEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYA 244
G + A + FE +E+ + E NVVSW ++++G A
Sbjct: 332 GLVDKALEMFELFKEQTM---------------------------ELNVVSWTSIIAGCA 364
Query: 245 RNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDG 304
+NG+ +EA LF +M + V + N V+ +M+
Sbjct: 365 QNGKDIEALELFREMQVAGV---------------------------KPNHVTIPSMLPA 397
Query: 305 YVRIAKLDEAR---------RLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTH 355
IA L R LLD N+ +A+I Y + R++ + +F+ + T
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLD-----NVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 356 DVVCWNVMIKGYAQCGRMDEAINLF----RQMVNKDIVTWNTMIAGYAQIRQMDDAVKIF 411
++VCWN ++ G++ G+ E +++F R + D +++ ++++ Q+ D+ K F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 412 EEMGK 416
+ M +
Sbjct: 513 KMMSE 517
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 154/325 (47%), Gaps = 26/325 (8%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFE----QMPQRNL 77
I GKSG V I +F+Q N+ I+ ++NG V+ A ++FE Q + N+
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 78 VSWNSMIAGYLHNDKVKEARELFDKM----FRPDLFSWALMITCYTRKGELEKARELFDL 133
VSW S+IAG N K EA ELF +M +P+ + M+ L R
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 134 ---LPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLA 190
+ ++ +A++ YAK G N ++ + + MP+KN+V WNS+++G++ +G+
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 191 SKFFEA-MEER---DVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVS-----WVTMLS 241
FE+ M R D +S+ +L ++ D WK+F+ + E+ + + M++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 242 GYARNGRMLEARRLFDQMPIR-NVVAWNAMIAAYVQRGQIE----EAARLFIEMPERNPV 296
R G++ EA L +MP + W A++ + + ++ A +LF PE NP
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPG 592
Query: 297 SWTTMIDGYVRIAKLDEARRLLDQM 321
++ + + Y E + ++M
Sbjct: 593 TYVLLSNIYAAKGMWTEVDSIRNKM 617
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Query: 476 QIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAING 535
Q H +KSG ND ++ LI Y+ +A+L+ + + S++SLI
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 536 NATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHY 595
T++I +F M G+ PD + C+ + G K C++ V ++
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG-KQIHCVSCVSGLDMDAFVQ 154
Query: 596 ACMIDLLSRAGRLDEAFEMVKGMKIK 621
M + R GR+ +A ++ M K
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDK 180
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 213/688 (30%), Positives = 344/688 (50%), Gaps = 100/688 (14%)
Query: 139 DTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME 198
DT N +V + G + A+K+ D MP KN VS N+M+SG+ K G++ A F+AM
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 199 ERDVVSWNLMLDGYVELDDLDSAWKFFQK--------IPEQNVVSWVTMLSG----YARN 246
+R VV+W +++ Y D A+K F++ +P+ V++ T+L G +N
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH--VTFTTLLPGCNDAVPQN 164
Query: 247 G----RMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMI 302
+ FD P V N ++ +Y + +++ A LF E+PE++ V++ T+I
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLI 222
Query: 303 DGYVRIAKLDEARRLLDQMPYKNIAAQTAMISG--------------------------- 335
GY + E+ L +M SG
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 336 ------------YVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM 383
Y ++ R+ E +FD++ D V +NV+I Y+Q + + +++ FR+M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 384 ---------------------------------------VNKDIVTWNTMIAGYAQIRQM 404
+ + N+++ YA+
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMF 402
Query: 405 DDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSA 464
++A IF+ + +R TVSW ALISG++Q H LK+F M +AD ST A L A
Sbjct: 403 EEAELIFKSL-PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 465 CAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISW 524
A A+L LG+Q+H I+SG + ++F G+ L+ MYAKCG I++A +F++ + +SW
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 525 NSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTE 584
N+LI+ +A NG+ AI F +M+ G+ PD V+ +GVL+ACSH G V+ G + F+ M+
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 581
Query: 585 VYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGR 644
+Y I P +HYACM+DLL R GR EA +++ M +P+ +W ++L ACR+H+N L
Sbjct: 582 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 641
Query: 645 IAVEKLSELEP-QKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQ 703
A EKL +E + + Y +SN++A AG W++V V+ +M G +K P SW+EV ++
Sbjct: 642 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHK 701
Query: 704 IHTFLSGDPKQCRTAEICNTLKTLAAQI 731
IH F S D EI + L A+I
Sbjct: 702 IHVFSSNDQTHPNGDEIVRKINELTAEI 729
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 172/682 (25%), Positives = 295/682 (43%), Gaps = 131/682 (19%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLV 78
N + L + G+V A K++ +M KNTV+ N+MIS + K G V+ AR LF+ MP R +V
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVV 111
Query: 79 SWNSMIAGYLHNDKVKEARELFDKMFR------PDLFSW-ALMITC-----YTRKGELEK 126
+W ++ Y N EA +LF +M R PD ++ L+ C G++
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 127 -AREL-FDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKN 184
A +L FD P N ++ Y ++ + A L + +P K+ V++N++++GY K+
Sbjct: 172 FAVKLGFDTNPF---LTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 185 G----EMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVT-- 238
G +HL K ++ + +++ +L V L D + Q++ +V + +
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD----FALGQQLHALSVTTGFSRD 284
Query: 239 ------MLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMP- 291
+L Y+++ R+LE R LFD+MP + V++N +I++Y Q Q E + F EM
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 292 ---ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKN----IAAQTAMISGYVQNKRMDE 344
+R + TM+ ++ L R+L Q + +++ Y + + +E
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 345 ANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM----VNKDIVTWNTMIAG--- 397
A IF + V W +I GY Q G + LF +M + D T+ T++
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 398 --------------------------------YAQIRQMDDAVKIFEEMGKRRNTVSWNA 425
YA+ + DAV++FEEM RN VSWNA
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD-RNAVSWNA 523
Query: 426 LISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSG 485
LIS N A+ F M + G + D ++ L+AC+H
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH------------------ 565
Query: 486 YVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVIS-----WNSLIAGYAINGNATEA 540
CG ++ F+ P+ I+ + ++ NG EA
Sbjct: 566 -----------------CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608
Query: 541 IKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTE-VYAIEPLVE--HYAC 597
KL +EM E PD + + VL+AC + L E E ++++E L + Y
Sbjct: 609 EKLMDEMPFE---PDEIMWSSVLNACR----IHKNQSLAERAAEKLFSMEKLRDAAAYVS 661
Query: 598 MIDLLSRAGRLDEAFEMVKGMK 619
M ++ + AG ++ ++ K M+
Sbjct: 662 MSNIYAAAGEWEKVRDVKKAMR 683
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 241/525 (45%), Gaps = 66/525 (12%)
Query: 199 ERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQ 258
+ D N +++ + + +A K + ++P +N VS TM+SG+ + G + AR LFD
Sbjct: 45 DTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDA 104
Query: 259 MPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNP------VSWTTMIDGYVRIAKLD 312
MP R VV W ++ Y + +EA +LF +M + V++TT++ G +
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 313 EARRL--------LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMI 364
++ D P+ ++ ++ Y + +R+D A +F++I D V +N +I
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLI 222
Query: 365 KGYAQCGRMDEAINLFRQM---------------------------------------VN 385
GY + G E+I+LF +M +
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 386 KDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVL 445
+D N ++ Y++ ++ + +F+EM + + VS+N +IS + Q + + +L F
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPE-LDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 446 MTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGR 505
M G + A LS A+L++LQ+GRQ+H A+ + + L VGNSL+ MYAKC
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 401
Query: 506 IQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSA 565
+ AEL+FK +SW +LI+GY G +KLF +M + D TF VL A
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 566 CSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAG 625
+ + G +L + +E + ++D+ ++ G + +A ++ + M + NA
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMPDR-NAV 519
Query: 626 IWGTLLGACRMHQNIKLGRIAVEKL-----SELEPQKTSCYALLS 665
W L+ A H + G A+ S L+P S +L+
Sbjct: 520 SWNALISA---HADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 144/325 (44%), Gaps = 44/325 (13%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLV 78
N + K EEA IF + Q+ TV++ ++IS Y + G KLF +M NL
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 79 SWNSMIAGYLHND----KVKEARELFDKMFRP----DLFSWALMITCYTRKGELEKAREL 130
+ S A L + ++L + R ++FS + ++ Y + G ++ A ++
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 131 FDLLPNKEDTACWNAMVAGYAKIGNYNEA----KKLLDAMPSKNIVSWNSMLSGYTKNGE 186
F+ +P++ + WNA+++ +A G+ A K++++ + VS +L+ + G
Sbjct: 510 FEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 187 MHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARN 246
+ +++F+AM + P++ + ML RN
Sbjct: 569 VEQGTEYFQAMS------------------------PIYGITPKKK--HYACMLDLLGRN 602
Query: 247 GRMLEARRLFDQMPIR-NVVAWNAMI-AAYVQRGQ--IEEAARLFIEMPE-RNPVSWTTM 301
GR EA +L D+MP + + W++++ A + + Q E AA M + R+ ++ +M
Sbjct: 603 GRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSM 662
Query: 302 IDGYVRIAKLDEARRLLDQMPYKNI 326
+ Y + ++ R + M + I
Sbjct: 663 SNIYAAAGEWEKVRDVKKAMRERGI 687
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
VF+ + + K G +++A+++F +M +N V++N++ISA+A NG A F +M +
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 75 RNLVSWNSMIAGYL----HNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELE 125
L + I G L H V++ E F M P +A M+ R G
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 126 KARELFDLLPNKEDTACWNAMVAGYAKIGNYN----EAKKLLDAMPSKNIVSWNSMLSGY 181
+A +L D +P + D W++++ N + A+KL ++ ++ SM + Y
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 182 TKNGEMHLASKFFEAMEERDV 202
GE +AM ER +
Sbjct: 667 AAAGEWEKVRDVKKAMRERGI 687
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 33/126 (26%)
Query: 475 RQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAG---- 530
R++ IK+G+ D N ++ + G++ A ++ + + +S N++I+G
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 531 ---------------------------YAINGNATEAIKLFEEMVMEG--VAPDPVTFIG 561
YA N + EA KLF +M PD VTF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 562 VLSACS 567
+L C+
Sbjct: 153 LLPGCN 158
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 209/715 (29%), Positives = 372/715 (52%), Gaps = 64/715 (8%)
Query: 81 NSMIAGYLHNDKVKEARELFD-----KMFRPDLFSWALMITCYTRKGELEKARELFDLLP 135
N I ++ +EA E FD F+ L ++ +I + L + R++ D +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 136 N---KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASK 192
N K DT N +++ Y K G+ +A+++ D MP +N+VS+ S+++GY++NG+ A +
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 193 FFEAMEERDVV----SWNLMLDGYVELDDLDSAWKFFQKI----PEQNVVSWVTMLSGYA 244
+ M + D+V ++ ++ D+ + ++ ++++ +++ Y
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 245 RNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMP-----ERNPVSWT 299
R +M +A R+F +P++++++W+++IA + Q G EA EM N +
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 300 TMIDGYVRIAKLDEARRL----LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTH 355
+ + + + D ++ + N A ++ Y + ++ A ++FD+I
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 356 DVVCWNVMIKGYAQCGRMDEAINLFRQM------------------------------VN 385
D WNV+I G A G DEA+++F QM ++
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 386 KDIVTW---------NTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFH 436
I+ W N+++ Y + +FE+ ++VSWN +++ LQ+E
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 437 LDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSL 496
++ L++F LM + DH T+ L C +++L+LG Q+H ++K+G + F+ N L
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 497 ITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDP 556
I MYAKCG + A +F D DV+SW++LI GYA +G EA+ LF+EM G+ P+
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 557 VTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVK 616
VTF+GVL+ACSHVGLV+ GLKL+ M + I P EH +C++DLL+RAGRL+EA +
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 617 GMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDE 676
MK++P+ +W TLL AC+ N+ L + A E + +++P ++ + LL +MHA +G W+
Sbjct: 635 EMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEN 694
Query: 677 VEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQI 731
+R SM+ +K PG SWIE++++IH F + D +I L + +Q+
Sbjct: 695 AALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 161/350 (46%), Gaps = 30/350 (8%)
Query: 45 NTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM- 103
N + S+ YA+ G +N AR++F+Q+ + + SWN +IAG +N EA +F +M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 104 ---FRPDLFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGNYN 157
F PD S ++ T+ L + ++ + D N+++ Y +
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 158 EAKKLL-DAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----ERDVVSWNLMLDGY 212
L D + + VSWN++L+ ++ + + F+ M E D ++ +L G
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 213 VELDDLDSAWKFFQK------IPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVA 266
VE+ L + PEQ + + ++ YA+ G + +ARR+FD M R+VV+
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKN--GLIDMYAKCGSLGQARRIFDSMDNRDVVS 541
Query: 267 WNAMIAAYVQRGQIEEAARLFIEMP----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMP 322
W+ +I Y Q G EEA LF EM E N V++ ++ + ++E +L M
Sbjct: 542 WSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Query: 323 YKNIAAQT-----AMISGYVQNKRMDEANQIFDKIGTH-DVVCWNVMIKG 366
++ + T ++ + R++EA + D++ DVV W ++
Sbjct: 602 TEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 32/191 (16%)
Query: 16 FNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMP-- 73
F +N I K G + +A +IF M ++ V+++++I YA++G +A LF++M
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 74 --QRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELF 131
+ N V++ ++ H V+E +L+ M T G
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATM--------------QTEHG--------- 605
Query: 132 DLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMP-SKNIVSWNSMLSGYTKNGEMHLA 190
+ P KE +C +V A+ G NEA++ +D M ++V W ++LS G +HLA
Sbjct: 606 -ISPTKEHCSC---VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Query: 191 SKFFEAMEERD 201
K E + + D
Sbjct: 662 QKAAENILKID 672
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 236/766 (30%), Positives = 387/766 (50%), Gaps = 80/766 (10%)
Query: 45 NTVTYNSMISAYAKN-GRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM 103
+ V N +IS Y K G V A F + +N VSWNS+I+ Y + A +F M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 104 ----FRPDLFSWALMIT--CYTRKGELEKARELFDLLPNK---EDTACWNAMVAGYAKIG 154
RP +++ ++T C + ++ ++ + D + +V+ +AK G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 155 NYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFF---EAMEERDVVSWNLMLDG 211
+ + A+K+ + M ++N V+ N ++ G + A+K F +M + S+ ++L
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 212 YVELD-----DLDSAWKFFQKIPEQNVVSWVT-----MLSGYARNGRMLEARRLFDQMPI 261
+ E L + + +V ++ +++ YA+ G + +ARR+F M
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 262 RNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN--PVSWTTMIDGYVRIAKLDEARRLLD 319
++ V+WN+MI Q G EA + M + P S+T +I A L A+ L
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT-LISSLSSCASLKWAK--LG 434
Query: 320 QMPYK---------NIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQC 370
Q + N++ A+++ Y + ++E +IF + HD V WN +I A+
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 371 GR-MDEAINLF------RQMVNK---------------------------------DIVT 390
R + EA+ F Q +N+ + T
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 391 WNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEG 450
N +IA Y + +MD KIF M +RR+ V+WN++ISG++ NE AL + M Q G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 451 KKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAE 510
++ D A LSA A +A L+ G ++H ++++ +D+ VG++L+ MY+KCGR+ A
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYAL 674
Query: 511 LLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEG-VAPDPVTFIGVLSACSHV 569
F + SWNS+I+GYA +G EA+KLFE M ++G PD VTF+GVLSACSH
Sbjct: 675 RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHA 734
Query: 570 GLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGT 629
GL++ G K FE M++ Y + P +EH++CM D+L RAG LD+ + ++ M +KPN IW T
Sbjct: 735 GLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT 794
Query: 630 LLGACRMHQNIK--LGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGS 687
+LGAC K LG+ A E L +LEP+ Y LL NM+A GRW+++ K R M+ +
Sbjct: 795 VLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854
Query: 688 GAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIRN 733
+K+ G SW+ +K+ +H F++GD I LK L ++R+
Sbjct: 855 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 170/680 (25%), Positives = 311/680 (45%), Gaps = 85/680 (12%)
Query: 36 KIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKE 95
+++ K+ N++I+AY + G ARK+F++MP RN VSW +++GY N + KE
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 96 ARELFDKMFRPDLFSWALMITCYTRKGE------LEKARELFDL---LPNKEDTACWNAM 146
A M + +FS R + + R++ L L D N +
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 147 VAGYAK-IGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----ERD 201
++ Y K IG+ A + KN VSWNS++S Y++ G+ A + F +M+
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 202 VVSWNLMLDGYVELDDLDSAW--KFFQKIPEQNVVSWV----TMLSGYARNGRMLEARRL 255
++ ++ L + D + I + +++ + ++S +A++G + AR++
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 256 FDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMP---ERNPVSWTTMIDGYVRIAKLD 312
F+QM RN V N ++ V++ EEA +LF++M + +P S+ ++ + + +
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAE 325
Query: 313 E--------------ARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVV 358
E L+D M + +++ Y + + +A ++F + D V
Sbjct: 326 EVGLKKGREVHGHVITTGLVDFM----VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 359 CWNVMIKGYAQCGRMDEAINLFRQMVNKDIVT----------------W----------- 391
WN MI G Q G EA+ ++ M DI+ W
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 392 ------------NTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHL-D 438
N ++ YA+ +++ KIF M + VSWN++I ++E L +
Sbjct: 442 LKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM-PEHDQVSWNSIIGALARSERSLPE 500
Query: 439 ALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLIT 498
A+ F+ + G+K + T + LSA + L+ +LG+QIH LA+K+ ++ N+LI
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIA 560
Query: 499 MYAKCGRIQNAELLF-KDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPV 557
Y KCG + E +F + A+ D ++WNS+I+GY N +A+ L M+ G D
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 558 TFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKG 617
+ VLSA + V ++ G+++ C +E V + ++D+ S+ GRLD A
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 618 MKIKPNAGIWGTLLGACRMH 637
M ++ N+ W +++ H
Sbjct: 680 MPVR-NSYSWNSMISGYARH 698
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/622 (21%), Positives = 255/622 (40%), Gaps = 111/622 (17%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM-- 72
+F + ++ KSG + A K+F+QM +N VT N ++ + +A KLF M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 73 -----PQRNLVSWNSMIAGYLHND-KVKEARELFDKMFRPDLFSWAL-----MITCYTRK 121
P+ ++ +S L + +K+ RE+ + L + + ++ Y +
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 122 GELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWN-SMLSG 180
G + AR +F + +K D+ WN+M+ G + G + EA + +M +I+ + +++S
Sbjct: 363 GSIADARRVFYFMTDK-DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 181 YTKNGEMHLASKFFEAMEER-------DVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNV 233
+ + A + E +V N ++ Y E L+ K F +PE +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 234 VSWVTMLSGYARNGRML-----------------------------------EARRLFDQ 258
VSW +++ AR+ R L E +
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 259 MPIRNVVA-----WNAMIAAYVQRGQIEEAARLFIEMPE-RNPVSWTTMIDGYVRIAKLD 312
+ ++N +A NA+IA Y + G+++ ++F M E R+ V+W +MI GY+ L
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLA 601
Query: 313 EARRL----------LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNV 362
+A L LD Y + + A ++ + M+ DVV +
Sbjct: 602 KALDLVWFMLQTGQRLDSFMYATVLSAFASVA--TLERGMEVHACSVRACLESDVVVGSA 659
Query: 363 MIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVS 422
++ Y++CGR+D A+ F M ++ +WN+MI+GYA+ Q ++A+K+FE M T
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT-- 717
Query: 423 WNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLG-RQIHHLA 481
DH T LSAC+H L+ G + ++
Sbjct: 718 -----------------------------PPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 482 IKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPV--DVISWNSLIAGYA-INGNAT 538
G + + + + + G + E F + P+ +V+ W +++ NG
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLE-DFIEKMPMKPNVLIWRTVLGACCRANGRKA 807
Query: 539 EAIKLFEEMVMEGVAPDPVTFI 560
E K EM+ + + V ++
Sbjct: 808 ELGKKAAEMLFQLEPENAVNYV 829
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 215/471 (45%), Gaps = 33/471 (7%)
Query: 191 SKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRML 250
S+ ++ ++DV N +++ Y+E D SA K F ++P +N VSW ++SGY+RNG
Sbjct: 25 SRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHK 84
Query: 251 EA----RRLFDQMPIRNVVAWNAMIAAYVQRGQI------EEAARLFIEMPERNPVSWTT 300
EA R + + N A+ +++ A + G + + +F + V
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 301 MIDGYVR-IAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKI---GTHD 356
+I Y + I + A + KN + ++IS Y Q A +IF + G+
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 357 V-VCWNVMIKGYAQCGRMDEAINLFRQMVN--------KDIVTWNTMIAGYAQIRQMDDA 407
+ ++ C + + L Q++ D+ + +++ +A+ + A
Sbjct: 205 TEYTFGSLVT--TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 408 VKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALS---- 463
K+F +M + RN V+ N L+ G ++ ++ +A K+F+ M + S + S
Sbjct: 263 RKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEY 321
Query: 464 ACAHLAALQLGRQIHHLAIKSGYVNDLF-VGNSLITMYAKCGRIQNAELLFKDADPVDVI 522
+ A L+ GR++H I +G V+ + +GN L+ MYAKCG I +A +F D +
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 523 SWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECM 582
SWNS+I G NG EA++ ++ M + P T I LS+C+ + G ++
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 583 TEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGA 633
++ I+ V ++ L + G L+E ++ M W +++GA
Sbjct: 442 LKL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 209/507 (41%), Gaps = 93/507 (18%)
Query: 234 VSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER 293
+S+V G+ R +R L+ ++V N +I AY++ G A ++F EMP R
Sbjct: 7 LSFVQSCVGHRGAARFFHSR-LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 294 NPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNI-AAQTAMISGYVQNKRMDEANQIFDKI 352
N VSW ++ GY R + EA L M + I + Q A +S + + +F +
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR- 124
Query: 353 GTH----------DVVCWNVMIKGYAQC-GRMDEAINLFRQMVNKDIVTWNTMIAGYAQI 401
H D V NV+I Y +C G + A+ F + K+ V+WN++I+ Y+Q
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 402 RQMDDAVKIFEEM---GKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTL 458
A +IF M G R ++ +L+ T
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLV-----------------------------TT 215
Query: 459 ACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADP 518
AC+L+ ++L QI KSG + DLFVG+ L++ +AK G + A +F +
Sbjct: 216 ACSLTE----PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 519 VDVISWNSLIAGYAINGNATEAIKLFEEM-VMEGVAPDPVTFIGVLSAC----------- 566
+ ++ N L+ G EA KLF +M M V+P+ +++ +LS+
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGL 329
Query: 567 -------SHV---GLVDGGLKLFECMTEVYA---------------IEPLVEHYACMIDL 601
HV GLVD + + + +YA + + MI
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 602 LSRAGRLDEAFEMVKGMK---IKPNAGIWGTLLGACRMHQNIKLG-RIAVEKLSELEPQK 657
L + G EA E K M+ I P + + L +C + KLG +I E L
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449
Query: 658 TSCYALLSNMHAEAGRWDEVEKVRVSM 684
S L ++AE G +E K+ SM
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSM 476
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 27 KSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM-----PQRNLVSWN 81
K GR++ A++ F+ M +N+ ++NSMIS YA++G+ +A KLFE M + V++
Sbjct: 666 KCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFV 725
Query: 82 SMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKARELFDLLPN 136
+++ H ++E + F+ M P + ++ M R GEL+K + + +P
Sbjct: 726 GVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPM 785
Query: 137 KEDTACWNAMVAGYAKIGNY-----NEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLAS 191
K + W ++ + +A ++L + +N V++ + + Y G
Sbjct: 786 KPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLV 845
Query: 192 KFFEAMEERDV-----VSWNLMLDG 211
K + M++ DV SW M DG
Sbjct: 846 KARKKMKDADVKKEAGYSWVTMKDG 870
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 219/673 (32%), Positives = 355/673 (52%), Gaps = 63/673 (9%)
Query: 124 LEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAM------PSKNIVSW--N 175
L A+E+F+ + +N+++ GYA G NEA L M P K + +
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 176 SMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVS 235
+ K + + + +D+ N ++ Y E +LDSA K F ++ E+NVVS
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 236 WVTMLSGYARNGRMLEARRLF-----DQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEM 290
W +M+ GYAR +A LF D+ N V +I+A + +E +++ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 291 P----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEAN 346
E N + + ++D Y++ +D A+RL D+ N+ AM S YV+ EA
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 347 QIF----------DKIG------------------------------THDVVCWNVMIKG 366
+F D+I + D +C N +I
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDM 381
Query: 367 YAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNAL 426
Y +C R D A +F +M NK +VTWN+++AGY + ++D A + FE M +N VSWN +
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM-PEKNIVSWNTI 440
Query: 427 ISGFLQNEFHLDALKIFVLM-TQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSG 485
ISG +Q +A+++F M +QEG AD T+ SAC HL AL L + I++ K+G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 486 YVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFE 545
D+ +G +L+ M+++CG ++A +F DV +W + I A+ GNA AI+LF+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 546 EMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRA 605
+M+ +G+ PD V F+G L+ACSH GLV G ++F M +++ + P HY CM+DLL RA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 606 GRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLS 665
G L+EA ++++ M ++PN IW +LL ACR+ N+++ A EK+ L P++T Y LLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 666 NMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGD---PKQCRTAEICN 722
N++A AGRW+++ KVR+SM+ G +K PG S I+++ + H F SGD P+ + +
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Query: 723 TLKTLAAQIRNTP 735
+ A+ + + P
Sbjct: 741 EVSQRASHLGHVP 753
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/538 (27%), Positives = 243/538 (45%), Gaps = 87/538 (16%)
Query: 44 KNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM 103
K+ NS++ YA+ G ++ ARK+F++M +RN+VSW SMI GY D K+A +LF +M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 104 FR-----PDLFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGN 155
R P+ + +I+ + +LE +++ + N + + +A+V Y K
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 156 YNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVEL 215
+ AK+L D + N+ N+M S Y + G A F NLM+D V
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF-----------NLMMDSGVRP 335
Query: 216 DDLDSAWKFFQKIPEQNVVSWVTMLSGYA-RNG-------------------RMLEARRL 255
D + S + + W GY RNG R A R+
Sbjct: 336 DRI-SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 256 FDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEAR 315
FD+M + VV WN+++A YV+ G+++ A F MPE+N VSW T+I G V+ + +EA
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 316 RLLDQMPYK---NIAAQTAM--ISGYVQNKRMDEANQIF---DKIGTH-DVVCWNVMIKG 366
+ M + N T M S +D A I+ +K G DV ++
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 367 YAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNAL 426
+++CG + A+++F + N+D+ W I A + A+++F++
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDD------------- 561
Query: 427 ISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGY 486
M ++G K D AL+AC+H +Q G++I + +K
Sbjct: 562 -------------------MIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 487 VN--DLFVGNSLITMYAKCGRIQNAELLFKD--ADPVDVISWNSLIAGYAINGNATEA 540
V+ D+ G ++ + + G ++ A L +D +P DVI WNSL+A + GN A
Sbjct: 603 VSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMA 658
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 4/206 (1%)
Query: 378 NLFRQMVNKDIVTWNTMIAGYAQI---RQMDDAVKIFEEMGKRRNTVSWNALISGFLQNE 434
+L +Q ++ D+ T ++A ++ + A ++FE +N+LI G+ +
Sbjct: 54 SLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSG 113
Query: 435 FHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGN 494
+A+ +F+ M G D T LSACA A G QIH L +K GY DLFV N
Sbjct: 114 LCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQN 173
Query: 495 SLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVM-EGVA 553
SL+ YA+CG + +A +F + +V+SW S+I GYA A +A+ LF MV E V
Sbjct: 174 SLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVT 233
Query: 554 PDPVTFIGVLSACSHVGLVDGGLKLF 579
P+ VT + V+SAC+ + ++ G K++
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVY 259
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLV 78
N I K R + A +IF +MS K VT+NS+++ Y +NG V+ A + FE MP++N+V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 79 SWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKARELFDL 133
SWN++I+G + +EA E+F M D + + + G L+ A+ ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 134 LPN---KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLA 190
+ + D +V +++ G+ A + +++ ++++ +W + + G A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 191 SKFFEAMEERDVVSWNLMLDGYVELDDLD----------------SAWKFFQKIPEQNVV 234
+ F+ D++ L DG + L S K PE V
Sbjct: 556 IELFD-----DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED--V 608
Query: 235 SWVTMLSGYARNGRMLEARRLFDQMPIR-NVVAWNAMIAAYVQRGQIEEAA----RLFIE 289
+ M+ R G + EA +L + MP+ N V WN+++AA +G +E AA ++ +
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 290 MPER 293
PER
Sbjct: 669 APER 672
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 229/751 (30%), Positives = 390/751 (51%), Gaps = 93/751 (12%)
Query: 59 NGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCY 118
+ R+ +A LF++ P R+ S+ S++ G+ + + +EA+ LF + R + + C
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR-----LGMEMDCS 94
Query: 119 TRKGELEKARELFDLLPNKE------------DTACWNAMVAGYAKIGNYNEAKKLLDAM 166
L+ + L D L ++ D + ++V Y K N+ + +K+ D M
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 167 PSKNIVSWNSMLSGYTKNGEMHLASKFFEAME-------------------ERDVVSWNL 207
+N+V+W +++SGY +N F M+ E V L
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 208 MLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAW 267
+ V + LD + IP N ++++ Y + G + +AR LFD+ +++VV W
Sbjct: 215 QVHTVVVKNGLD------KTIPVSN-----SLINLYLKCGNVRKARILFDKTEVKSVVTW 263
Query: 268 NAMIAAYVQRGQIEEAARLFIEMP----ERNPVSWTTMIDGYVRIAKLDEARRL-LDQMP 322
N+MI+ Y G EA +F M + S+ ++I + +L +L +
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 323 YKNIAAQ---TAMISGYVQNKRMDEANQIFDKIG-THDVVCWNVMIKGYAQCGRMDEAIN 378
Y + Q TA++ Y + M +A ++F +IG +VV W MI G+ Q +EA++
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 379 LFRQM--------------------------VNKDIVTWN---------TMIAGYAQIRQ 403
LF +M V+ +V N ++ Y ++ +
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 404 MDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALS 463
+++A K+F + + + V+W+A+++G+ Q A+K+F +T+ G K + T + L+
Sbjct: 444 VEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 464 ACAHL-AALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVI 522
CA A++ G+Q H AIKS + L V ++L+TMYAK G I++AE +FK D++
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Query: 523 SWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECM 582
SWNS+I+GYA +G A +A+ +F+EM V D VTFIGV +AC+H GLV+ G K F+ M
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 583 TEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKL 642
I P EH +CM+DL SRAG+L++A ++++ M + IW T+L ACR+H+ +L
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTEL 682
Query: 643 GRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKN 702
GR+A EK+ ++P+ ++ Y LLSNM+AE+G W E KVR M +K+PG SWIEVKN
Sbjct: 683 GRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Query: 703 QIHTFLSGDPKQCRTAEICNTLKTLAAQIRN 733
+ ++FL+GD +I L+ L+ ++++
Sbjct: 743 KTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/548 (24%), Positives = 235/548 (42%), Gaps = 130/548 (23%)
Query: 211 GYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLF-------------- 256
G V L +A F K P ++ S++++L G++R+GR EA+RLF
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 257 ------------DQMPIR-------------NVVAWNAMIAAYVQRGQIEEAARLFIEMP 291
D++ R +V +++ Y++ ++ ++F EM
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 292 ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPY---------------------------- 323
ERN V+WTT+I GY R + DE L +M
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 324 -----------KNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGR 372
K I ++I+ Y++ + +A +FDK VV WN MI GYA G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 373 MDEAINLFRQM------------------------------VNKDIVTW---------NT 393
EA+ +F M ++ +V +
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 394 MIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKA 453
++ Y++ M DA+++F+E+G N VSW A+ISGFLQN+ +A+ +F M ++G +
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 454 DHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLF 513
+ T + L+A ++ ++H +K+ Y VG +L+ Y K G+++ A +F
Sbjct: 396 NEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 514 KDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVD 573
D D+++W++++AGYA G AIK+F E+ G+ P+ TF +L+ C+
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 574 GGLKLFECMTEVYAIEPLVEHYAC----MIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGT 629
G K F +AI+ ++ C ++ + ++ G ++ A E+ K + K W +
Sbjct: 512 GQGKQFHG----FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS-WNS 566
Query: 630 LLGACRMH 637
++ H
Sbjct: 567 MISGYAQH 574
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/593 (22%), Positives = 267/593 (45%), Gaps = 89/593 (15%)
Query: 27 KSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAG 86
K ++ K+F +M ++N VT+ ++IS YA+N ++ LF +M
Sbjct: 140 KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGT--------- 190
Query: 87 YLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNK---EDTACW 143
+P+ F++A + +G + ++ ++ +
Sbjct: 191 ------------------QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 144 NAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----- 198
N+++ Y K GN +A+ L D K++V+WNSM+SGY NG A F +M
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 199 --ERDVVSWNLMLDGYVEL---DDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEAR 253
E S + EL + L + + + +QN+ + ++ Y++ ML+A
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDAL 350
Query: 254 RLFDQMP-IRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER----NPVSWTTMIDGYVRI 308
RLF ++ + NVV+W AMI+ ++Q EEA LF EM + N +++ ++ I
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 309 AKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYA 368
+ + +++ ++ TA++ YV+ +++EA ++F I D+V W+ M+ GYA
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 369 QCGRMDEAINLFRQMVNKDI----VTWNTMI----------------AGYAQIRQMDDA- 407
Q G + AI +F ++ I T+++++ G+A ++D +
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 408 ---------------VKIFEEMGKR---RNTVSWNALISGFLQNEFHLDALKIFVLMTQE 449
++ EE+ KR ++ VSWN++ISG+ Q+ + AL +F M +
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 450 GKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNS-LITMYAKCGRIQN 508
K D T +AC H ++ G + + ++ + NS ++ +Y++ G+++
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 509 AELLFKD-ADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFI 560
A + ++ +P W +++A ++ TE +L E ++ D ++
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVH-KKTELGRLAAEKIIAMKPEDSAAYV 702
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 102/194 (52%), Gaps = 14/194 (7%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNL---- 77
+T K G +E A ++F + +K+ V++NSMIS YA++G+ A +F++M +R +
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 78 VSWNSMIAGYLHNDKVKEARELFDKMFR-----PDLFSWALMITCYTRKGELEKARELFD 132
V++ + A H V+E + FD M R P + M+ Y+R G+LEKA ++ +
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 133 LLPNKEDTACWNAMVAGYAKIGNYNEAKKL----LDAMPSKNIVSWNSMLSGYTKNGEMH 188
+PN + W ++A ++ E +L + AM ++ ++ + + Y ++G+
Sbjct: 657 NMPNPAGSTIWRTILAA-CRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQ 715
Query: 189 LASKFFEAMEERDV 202
+K + M ER+V
Sbjct: 716 ERAKVRKLMNERNV 729
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 143/326 (43%), Gaps = 30/326 (9%)
Query: 27 KSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAG 86
K G+VEEA K+FS + K+ V +++M++ YA+ G A K+F ++ + + +
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 87 YLH-----NDKVKEARELFDKMFRPDLFS----WALMITCYTRKGELEKARELFDLLPNK 137
L+ N + + ++ + L S + ++T Y +KG +E A E+F K
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 138 EDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNI----VSWNSMLSGYTKNGEMHLASKF 193
D WN+M++GYA+ G +A + M + + V++ + + T G + K+
Sbjct: 560 -DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 194 FEAMEERDVVSW-----NLMLDGYVELDDLDSAWKFFQKIPEQ-NVVSWVTMLSGYARNG 247
F+ M ++ + M+D Y L+ A K + +P W T+L+ R
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA-CRVH 677
Query: 248 RMLEARRLFDQ----MPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN-----PVSW 298
+ E RL + M + A+ + Y + G +E A++ M ERN SW
Sbjct: 678 KKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSW 737
Query: 299 TTMIDGYVRIAKLDEARRLLDQMPYK 324
+ + D + L DQ+ K
Sbjct: 738 IEVKNKTYSFLAGDRSHPLKDQIYMK 763
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 349 bits (896), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 334/629 (53%), Gaps = 63/629 (10%)
Query: 144 NAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEM---HLASKFFEAMEER 200
N +V YAK G +A + +A+ K++VSWNS+++GY++NG + + + F M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 201 DVVSWNLMLDGYVELDD-LDS------AWKFFQKIPEQNVVSWVTMLSG-YARNGRMLEA 252
D++ L G + + L S A K+ + T L G Y + G + +
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 253 RRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAAR---LFIEMPERNPVS---WTTMIDGYV 306
++F MP RN W+ M++ Y RG++EEA + LF+ E S +T ++
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 307 RIAKLDEARRLLDQMPYKN-----IAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWN 361
+ R++ + KN +A A+++ Y + + ++EA ++FD G + + W+
Sbjct: 233 ATIYVGLGRQI-HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 362 VMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAG------------------------ 397
M+ GY+Q G EA+ LF +M + I I G
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 398 ---------------YAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKI 442
YA+ + DA K F+ + + R+ W +LISG++QN + +AL +
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCL-QERDVALWTSLISGYVQNSDNEEALIL 410
Query: 443 FVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAK 502
+ M G + T+A L AC+ LA L+LG+Q+H IK G+ ++ +G++L TMY+K
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 503 CGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGV 562
CG +++ L+F+ DV+SWN++I+G + NG EA++LFEEM+ EG+ PD VTF+ +
Sbjct: 471 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 563 LSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKP 622
+SACSH G V+ G F M++ ++P V+HYACM+DLLSRAG+L EA E ++ I
Sbjct: 531 ISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDH 590
Query: 623 NAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRV 682
+W LL AC+ H +LG A EKL L +++S Y LS ++ GR +VE+V
Sbjct: 591 GLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWK 650
Query: 683 SMEGSGAQKQPGCSWIEVKNQIHTFLSGD 711
M +G K+ GCSWIE+KNQ H F+ GD
Sbjct: 651 HMRANGVSKEVGCSWIELKNQYHVFVVGD 679
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 238/504 (47%), Gaps = 77/504 (15%)
Query: 27 KSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDAR---KLFEQMPQRNLVSWNSM 83
K G++ +A IF+ + K+ V++NS+I+ Y++NG ++ + +LF +M ++++
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 84 IAGY------LHNDKV-KEARELFDKMFR-PDLFSWALMITCYTRKGELEKARELFDLLP 135
+AG L + V ++A L KM D++ ++ Y + G +E ++F +P
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 136 NKEDTACWNAMVAGYAKIGNYNEAKKLLDAM------PSKNIVSWNSMLSGYTKNGEMHL 189
+ +T W+ MV+GYA G EA K+ + S + + ++LS + L
Sbjct: 181 ER-NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
Query: 190 ASKFFEAMEERDVVSW----NLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYAR 245
+ + ++ + N ++ Y + + L+ A K F ++N ++W M++GY++
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 246 NGRMLEARRLFDQMPIRNVVAWNAMIAA---------YVQRGQIEEAARLFIEMPERNPV 296
NG LEA +LF +M + I Y++ G+ + L + ER+
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF-ERHLF 358
Query: 297 SWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHD 356
+ T ++D Y + L +AR+ D + +++A T++ISGYVQN +EA ++ ++ T
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG 418
Query: 357 VV------------CWNV-------MIKG--------------------YAQCGRMDEAI 377
++ C ++ + G Y++CG +++
Sbjct: 419 IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGN 478
Query: 378 NLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEM---GKRRNTVSWNALISGFLQNE 434
+FR+ NKD+V+WN MI+G + Q D+A+++FEEM G + V++ +IS
Sbjct: 479 LVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538
Query: 435 FHLDALKIFVLMTQE---GKKADH 455
F F +M+ + K DH
Sbjct: 539 FVERGWFYFNMMSDQIGLDPKVDH 562
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 193/422 (45%), Gaps = 41/422 (9%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMF----R 105
N++++ Y+K +N+A K+F+ RN ++W++M+ GY N + EA +LF +MF +
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 106 PDLFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGNYNEAKKL 162
P ++ ++ + LE+ ++L L + A+V YAK G +A+K
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 163 LDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVV----SWNLMLDGYVELDDL 218
D + +++ W S++SGY +N + A + M+ ++ + +L L L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 219 DSAWK---------FFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNA 269
+ + F ++P + +S TM Y++ G + + +F + P ++VV+WNA
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALS--TM---YSKCGSLEDGNLVFRRTPNKDVVSWNA 494
Query: 270 MIAAYVQRGQIEEAARLFIEMP----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYK- 324
MI+ GQ +EA LF EM E + V++ +I ++ + M +
Sbjct: 495 MISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQI 554
Query: 325 ----NIAAQTAMISGYVQNKRMDEANQIFDKIGT-HDVVCWNVMIKGYAQCGRMDEAINL 379
+ M+ + ++ EA + + H + W +++ G+ + +
Sbjct: 555 GLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYA 614
Query: 380 FRQMV---NKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGF-LQNEF 435
+++ +++ T+ + Y + +M D ++++ M R N VS S L+N++
Sbjct: 615 GEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHM--RANGVSKEVGCSWIELKNQY 672
Query: 436 HL 437
H+
Sbjct: 673 HV 674
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 47/199 (23%)
Query: 456 STLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKD 515
STL L+ + L GR +H I++G + N L+ YAKCG++ A +F
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNA 74
Query: 516 ADPVDVISWNSLIAGYAINGNATEA---IKLFEEMVMEGVAPDPVTFIGVLSACSHV--- 569
DV+SWNSLI GY+ NG + + ++LF EM + + P+ T G+ A S +
Sbjct: 75 IICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSS 134
Query: 570 --------------------------------GLVDGGLKLFECMTE--VYAIEPLVEHY 595
GLV+ GLK+F M E Y +V Y
Sbjct: 135 TVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 596 ACMIDLLSRAGRLDEAFEM 614
A GR++EA ++
Sbjct: 195 A-------TRGRVEEAIKV 206
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 349 bits (895), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 231/746 (30%), Positives = 365/746 (48%), Gaps = 70/746 (9%)
Query: 52 MISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM----FRPD 107
++ Y K G ++DA K+F++MP R +WN+MI Y+ N + A L+ M
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 108 LFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGNYNEAKKLLD 164
L S+ ++ + ++ EL LL NA+V+ YAK + + A++L D
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 165 AMPSK-NIVSWNSMLSGYTKNG----------EMHLASKFFEAMEERDVVSWNLMLDG-- 211
K + V WNS+LS Y+ +G EMH+ A +VS DG
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP---APNSYTIVSALTACDGFS 298
Query: 212 YVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMI 271
Y +L A + +++ Y R G+M +A R+ QM +VV WN++I
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 272 AAYVQRGQIEEAARLFIEM----PERNPVSWTTMIDGYVRIAKLDEARRL----LDQMPY 323
YVQ +EA F +M + + VS T++I R++ L L +
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 324 KNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM 383
N+ +I Y + + F ++ D++ W +I GYAQ EA+ LFR +
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 384 VNK--------------------------------------DIVTWNTMIAGYAQIRQMD 405
K D V N ++ Y + R M
Sbjct: 479 AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMG 538
Query: 406 DAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSAC 465
A ++FE + K ++ VSW ++IS N +A+++F M + G AD L C LSA
Sbjct: 539 YATRVFESI-KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAA 597
Query: 466 AHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWN 525
A L+AL GR+IH ++ G+ + + +++ MYA CG +Q+A+ +F + ++ +
Sbjct: 598 ASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYT 657
Query: 526 SLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEV 585
S+I Y ++G A++LF++M E V+PD ++F+ +L ACSH GL+D G + M
Sbjct: 658 SMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHE 717
Query: 586 YAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRI 645
Y +EP EHY C++D+L RA + EAFE VK MK +P A +W LL ACR H ++G I
Sbjct: 718 YELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEI 777
Query: 646 AVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIH 705
A ++L ELEP+ L+SN+ AE GRW++VEKVR M+ SG +K PGCSWIE+ ++H
Sbjct: 778 AAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 837
Query: 706 TFLSGDPKQCRTAEICNTLKTLAAQI 731
F + D + EI L + ++
Sbjct: 838 KFTARDKSHPESKEIYEKLSEVTRKL 863
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 150/568 (26%), Positives = 264/568 (46%), Gaps = 71/568 (12%)
Query: 109 FSWALMITCYTRKGELEKAREL----FDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLD 164
F++ L + C R+ + + R+L F P+ E +V Y K G+ ++A+K+ D
Sbjct: 83 FAYVLEL-CGKRRA-VSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 165 AMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV----VSWNLMLDGYVELDDLDS 220
MP + +WN+M+ Y NGE A + M V S+ +L +L D+ S
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 221 AWKFFQKIPEQNVVSWV----TMLSGYARNGRMLEARRLFDQMPIR-NVVAWNAMIAAYV 275
+ + + S ++S YA+N + ARRLFD + + V WN+++++Y
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 276 QRGQIEEAARLFIEMPERNP-------VSWTTMIDG--YVRIAKLDEARRLLDQMPYKNI 326
G+ E LF EM P VS T DG Y ++ K A L +
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 327 AAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMV-- 384
A+I+ Y + +M +A +I ++ DVV WN +IKGY Q EA+ F M+
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 385 --NKDIVTWNTMIAGYAQIRQM----------------------DDAVKIFEE------M 414
D V+ ++IA ++ + + + ++ + M
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 415 GKR------RNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHL 468
G+ ++ +SW +I+G+ QN+ H++AL++F + ++ + D L L A + L
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 469 AALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLI 528
++ + ++IH ++ G + D + N L+ +Y KC + A +F+ DV+SW S+I
Sbjct: 501 KSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 559
Query: 529 AGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGG-------LKLFEC 581
+ A+NGN +EA++LF MV G++ D V + +LSA + + ++ G L+ C
Sbjct: 560 SSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFC 619
Query: 582 MTEVYAIEPLVEHYACMIDLLSRAGRLD 609
+ A+ +V+ YAC DL S D
Sbjct: 620 LEGSIAV-AVVDMYACCGDLQSAKAVFD 646
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 175/425 (41%), Gaps = 58/425 (13%)
Query: 1 MKASLKSIGNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNG 60
+ AS+ S ++ N I + G++ +A +I QM+ + VT+NS+I Y +N
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 61 RVNDARKLFEQM----PQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRP---------- 106
+A + F M + + VS S+IA + EL + +
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 107 ---DLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKL- 162
D++S +TCY + L + +D W ++AGYA+ + EA +L
Sbjct: 426 TLIDMYS-KCNLTCYMGRAFLRM---------HDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 163 ---------LDAMPSKNIVSWNSMLSG--YTKNGEMHLASKFFEAMEERDVVSWNLMLDG 211
+D M +I+ +S+L K H+ K D V N ++D
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-----LDTVIQNELVDV 530
Query: 212 YVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMI 271
Y + ++ A + F+ I ++VVSW +M+S A NG EA LF +M + A + +
Sbjct: 531 YGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590
Query: 272 ---------AAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMP 322
+ + +G+ L ++ ++D Y L A+ + D++
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA-VAVVDMYACCGDLQSAKAVFDRIE 649
Query: 323 YKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDV----VCWNVMIKGYAQCGRMDEAIN 378
K + T+MI+ Y + A ++FDK+ +V + + ++ + G +DE
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRG 709
Query: 379 LFRQM 383
+ M
Sbjct: 710 FLKIM 714
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 349 bits (895), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 204/668 (30%), Positives = 346/668 (51%), Gaps = 49/668 (7%)
Query: 46 TVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFR 105
+ N ++ Y+++G++ AR LF++MP RN SWN+MI GY+++ + + FD M
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 106 PDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLL-- 163
D +SW ++++ + + GEL AR LF+ +P K D N+++ GY G EA +L
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEK-DVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 164 -----DAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDL 218
DA+ ++ + L ++H ++ E D + +++ Y + DL
Sbjct: 181 LNFSADAITLTTVLKACAELEALKCGKQIH--AQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 219 DSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRG 278
A ++I E + S ++SGYA GR+ E+R LFD+ R V+ WN+MI+ Y+
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 279 QIEEAARLFIEM---PERNPVSWTTMIDGYVRIAKLDEARRLLDQMP----YKNIAAQTA 331
EA LF EM + + +I+ + + L+ +++ +I +
Sbjct: 299 MKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 332 MISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTW 391
++ Y + EA ++F ++ ++D + N MIK Y CGR+D+A +F ++ NK +++W
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 392 NTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGK 451
N+M +GF QN ++ L+ F M +
Sbjct: 419 NSM--------------------------------TNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 452 KADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAEL 511
D +L+ +SACA +++L+LG Q+ A G +D V +SLI +Y KCG +++
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR 506
Query: 512 LFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGL 571
+F D + WNS+I+GYA NG EAI LF++M + G+ P +TF+ VL+AC++ GL
Sbjct: 507 VFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGL 566
Query: 572 VDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLL 631
V+ G KLFE M + P EH++CM+DLL+RAG ++EA +V+ M + +W ++L
Sbjct: 567 VEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSIL 626
Query: 632 GACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQK 691
C + +G+ A EK+ ELEP+ + Y LS + A +G W+ VR M + K
Sbjct: 627 RGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTK 686
Query: 692 QPGCSWIE 699
PG SW +
Sbjct: 687 NPGSSWTD 694
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/596 (25%), Positives = 278/596 (46%), Gaps = 110/596 (18%)
Query: 168 SKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQK 227
S ++ N +L Y+++G+M +A F+ M +R+ SWN M++GY+ + ++ +FF
Sbjct: 59 SSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDM 118
Query: 228 IPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLF 287
+PE++ SW ++SG+A+ G + ARRLF+ MP ++VV N+++ Y+ G EEA RLF
Sbjct: 119 MPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF 178
Query: 288 IEMP-ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISG----YVQNKRM 342
E+ + ++ TT++ + L +++ Q+ + + M S Y + +
Sbjct: 179 KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 343 DEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIR 402
A+ + ++I D + +I GYA CGR++E+ LF + N+ ++ WN+MI+GY
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY---- 294
Query: 403 QMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACAL 462
+ N ++AL +F M E ++ D TLA +
Sbjct: 295 ----------------------------IANNMKMEALVLFNEMRNETRE-DSRTLAAVI 325
Query: 463 SACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAK-------------------- 502
+AC L L+ G+Q+H A K G ++D+ V ++L+ MY+K
Sbjct: 326 NACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTI 385
Query: 503 -----------CGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEG 551
CGRI +A+ +F+ + +ISWNS+ G++ NG E ++ F +M
Sbjct: 386 LLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLD 445
Query: 552 VAPDPVTFIGVLSACSHVGLVDGGLKLF---------------ECMTEVYAIEPLVEH-- 594
+ D V+ V+SAC+ + ++ G ++F + ++Y VEH
Sbjct: 446 LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGR 505
Query: 595 -------------YACMIDLLSRAGRLDEAFEMVKGMK---IKPNAGIWGTLLGACRMHQ 638
+ MI + G+ EA ++ K M I+P + +L AC
Sbjct: 506 RVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCG 565
Query: 639 NIKLGRIAVEKLS---ELEPQKTSCYALLSNMHAEAGRWDE----VEKVRVSMEGS 687
++ GR E + P K ++ + ++ A AG +E VE++ ++GS
Sbjct: 566 LVEEGRKLFESMKVDHGFVPDKEH-FSCMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 142/595 (23%), Positives = 271/595 (45%), Gaps = 59/595 (9%)
Query: 9 GNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKL 68
G S V N + +SG++ A +F +M +N ++N+MI Y +G + +
Sbjct: 56 GFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRF 115
Query: 69 FEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKAR 128
F+ MP+R+ SWN +++G+ ++ AR LF+ M D+ + ++ Y G E+A
Sbjct: 116 FDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEAL 175
Query: 129 ELFDLLPNKEDTACWNAMVAGYA-----KIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTK 183
LF L D ++ A K G A+ L+ + + ++ +S+++ Y K
Sbjct: 176 RLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN-SSLVNVYAK 234
Query: 184 NGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGY 243
G++ +AS E + E D S + ++ GY ++ + F + + V+ W +M+SGY
Sbjct: 235 CGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY 294
Query: 244 ARNGRMLEARRLFDQMPIRNVV-----AWNAMIAAYVQRGQIEEAARLFIEMPE----RN 294
N +EA LF++M RN A+I A + G +E ++ + +
Sbjct: 295 IANNMKMEALVLFNEM--RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDD 352
Query: 295 PVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGT 354
V +T++D Y + EA +L ++ + +MI Y R+D+A ++F++I
Sbjct: 353 IVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIEN 412
Query: 355 HDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDI----VTWNTMIAGYAQIRQMDDAVKI 410
++ WN M G++Q G E + F QM D+ V+ +++I+ A I ++ ++
Sbjct: 413 KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV 472
Query: 411 FE---------------------------EMGKR-------RNTVSWNALISGFLQNEFH 436
F E G+R + V WN++ISG+ N
Sbjct: 473 FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQG 532
Query: 437 LDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQI-HHLAIKSGYVNDLFVGNS 495
+A+ +F M+ G + T L+AC + ++ GR++ + + G+V D +
Sbjct: 533 FEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSC 592
Query: 496 LITMYAKCGRIQNAELLFKDADPVDVIS--WNSLIAGYAINGNATEAIKLFEEMV 548
++ + A+ G ++ A L ++ P DV W+S++ G NG K E+++
Sbjct: 593 MVDLLARAGYVEEAINLVEEM-PFDVDGSMWSSILRGCVANGYKAMGKKAAEKII 646
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 223/715 (31%), Positives = 363/715 (50%), Gaps = 88/715 (12%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELF----DKMFR 105
N++++ Y K G K+F+++ +RN VSWNS+I+ +K + A E F D+
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 106 PDLFSWALMITCYTRKGELE-----KARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAK 160
P F+ ++T + E K + L + ++ N +VA Y K+G +K
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 161 KLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAM----EERDVVSWNLMLDGYVELD 216
LL + +++V+WN++LS +N ++ A ++ M E D + + +L L+
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 217 DLDS-----AWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMI 271
L + A+ ++N ++ Y ++L RR+FD M R + WNAMI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 272 AAYVQRGQIEEAARLFIEMPER-----NPVSWTTMIDGYVRIAKLDE--------ARRLL 318
A Y Q +EA LFI M E N + ++ VR +R L
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 319 DQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAIN 378
D+ + Q ++ Y + ++D A +IF K+ D+V WN MI GY ++A+
Sbjct: 437 DRDRF----VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 379 LFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLD 438
L +M N + R++ G R ++ N++
Sbjct: 493 LLHKMQNLE--------------RKVSK--------GASRVSLKPNSI------------ 518
Query: 439 ALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLIT 498
TL L +CA L+AL G++IH AIK+ D+ VG++L+
Sbjct: 519 ------------------TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 560
Query: 499 MYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVT 558
MYAKCG +Q + +F +VI+WN +I Y ++GN EAI L M+++GV P+ VT
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 559 FIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGM 618
FI V +ACSH G+VD GL++F M Y +EP +HYAC++DLL RAGR+ EA++++ M
Sbjct: 621 FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Query: 619 KIKPN-AGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEV 677
N AG W +LLGA R+H N+++G IA + L +LEP S Y LL+N+++ AG WD+
Sbjct: 681 PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 740
Query: 678 EKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
+VR +M+ G +K+PGCSWIE +++H F++GD ++ ++ L+TL ++R
Sbjct: 741 TEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 180/405 (44%), Gaps = 44/405 (10%)
Query: 261 IRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQ 320
+ +V N ++ Y + G ++F + ERN VSW ++I K + A
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 321 MPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLF 380
M +N+ + + V C N+ + G+ A L
Sbjct: 190 MLDENVEPSSFTLVSVV-------------------TACSNLPMPEGLMMGKQVHAYGLR 230
Query: 381 RQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDAL 440
+ +N I+ NT++A Y ++ ++ + + G R + V+WN ++S QNE L+AL
Sbjct: 231 KGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEAL 287
Query: 441 KIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVND-LFVGNSLITM 499
+ M EG + D T++ L AC+HL L+ G+++H A+K+G +++ FVG++L+ M
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 347
Query: 500 YAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVME-GVAPDPVT 558
Y C ++ + +F + WN++IAGY+ N + EA+ LF M G+ + T
Sbjct: 348 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407
Query: 559 FIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYA---------CMIDLLSRAGRLD 609
GV+ AC G + AI V ++D+ SR G++D
Sbjct: 408 MAGVVPACVRSG----------AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 610 EAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELE 654
A + M+ + + W T++ ++ + + + K+ LE
Sbjct: 458 IAMRIFGKMEDR-DLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 188/426 (44%), Gaps = 72/426 (16%)
Query: 45 NTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM- 103
N+ N++++ Y K G++ ++ L R+LV+WN++++ N+++ EA E +M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 104 ---FRPDLFSWALMITCYTRKGELEKARELFDL-LPN---KEDTACWNAMVAGYAKIGNY 156
PD F+ + ++ + L +EL L N E++ +A+V Y
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 157 NEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEE----------------- 199
+++ D M + I WN+M++GY++N A F MEE
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 200 -----------------------RDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSW 236
RD N ++D Y L +D A + F K+ ++++V+W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 237 VTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPV 296
TM++GY + +A L +M ++R + A+R+ + + N +
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKM-------------QNLERKVSKGASRVSL---KPNSI 518
Query: 297 SWTTMIDGYVRIAKLDEARRL----LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKI 352
+ T++ ++ L + + + + ++A +A++ Y + + + ++FD+I
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 353 GTHDVVCWNVMIKGYAQCGRMDEAINLFRQM----VNKDIVTWNTMIAGYAQIRQMDDAV 408
+V+ WNV+I Y G EAI+L R M V + VT+ ++ A + +D+ +
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 409 KIFEEM 414
+IF M
Sbjct: 639 RIFYVM 644
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 137/311 (44%), Gaps = 46/311 (14%)
Query: 280 IEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIA----AQTAMISG 335
+ A +FI R+P W ++ VR L EA M I A A++
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 336 YVQNKRMDEANQIFDKI-----GTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVT 390
+ M+ QI + G V N ++ Y +CG +F ++ ++ V+
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 391 WNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEG 450
WN++I+ FE+ W AL+ F M E
Sbjct: 167 WNSLISSLCS----------FEK---------WEM-------------ALEAFRCMLDEN 194
Query: 451 KKADHSTLACALSACAHLA---ALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQ 507
+ TL ++AC++L L +G+Q+H ++ G +N F+ N+L+ MY K G++
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLA 253
Query: 508 NAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACS 567
++++L D+++WN++++ N EA++ EMV+EGV PD T VL ACS
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313
Query: 568 HVGLVDGGLKL 578
H+ ++ G +L
Sbjct: 314 HLEMLRTGKEL 324
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 144/326 (44%), Gaps = 31/326 (9%)
Query: 27 KSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAG 86
++G+ A + + +N+ ++++ Y +V R++F+ M R + WN+MIAG
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 87 YLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKARELFDLLPNK---E 138
Y N+ KEA LF M + + A ++ R G + + + +
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 139 DTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME 198
D N ++ Y+++G + A ++ M +++V+WN+M++GY + A M+
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 199 --ERDV-------------VSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSG- 242
ER V ++ +L L L + + N+ + V + S
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 558
Query: 243 ---YARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLF----IEMPERNP 295
YA+ G + +R++FDQ+P +NV+ WN +I AY G +EA L ++ + N
Sbjct: 559 VDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 618
Query: 296 VSWTTMIDGYVRIAKLDEARRLLDQM 321
V++ ++ +DE R+ M
Sbjct: 619 VTFISVFAACSHSGMVDEGLRIFYVM 644
>sp|Q9SJK9|PP189_ARATH Pentatricopeptide repeat-containing protein At2g36980,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2
SV=1
Length = 625
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/616 (32%), Positives = 311/616 (50%), Gaps = 36/616 (5%)
Query: 147 VAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV---- 202
+A AK G A+++ D MP + V+WN+ML+ Y++ G A F + D
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 203 VSWNLMLDGYVELDDLDSAWK---------FFQKIPEQNVVSWVTMLSGYARNGRMLEAR 253
S+ +L L ++ K F +P N +++ Y + L A
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNN-----SLIDMYGKCSDTLSAN 125
Query: 254 RLFDQMPI--RNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKL 311
++F M RN V W +++ AY+ Q E A +F+EMP+R +W MI G+ KL
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 312 DEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVC---W-------N 361
+ L +M S + D +N ++ ++ H V+ W N
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRM-VHAVMLKNGWSSAVEAKN 244
Query: 362 VMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTV 421
++ Y + G D+A+ + V+WN++I +I + + A+++F + +N V
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH-LAPEKNIV 303
Query: 422 SWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLA 481
+W +I+G+ +N AL+ FV M + G +DH L AC+ LA L G+ IH
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 482 IKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAI 541
I G+ +VGN+L+ +YAKCG I+ A+ F D D++SWN+++ + ++G A +A+
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQAL 423
Query: 542 KLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDL 601
KL++ M+ G+ PD VTFIG+L+ CSH GLV+ G +FE M + Y I V+H CMID+
Sbjct: 424 KLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDM 483
Query: 602 LSRAGRLDEAFEMVKG----MKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQK 657
R G L EA ++ + N W TLLGAC H + +LGR + L EP +
Sbjct: 484 FGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSE 543
Query: 658 TSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRT 717
+ LLSN++ GRW E E VR M G +K PGCSWIEV NQ+ TF+ GD R
Sbjct: 544 EMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRL 603
Query: 718 AEICNTLKTLAAQIRN 733
E+ TL L ++RN
Sbjct: 604 EELSETLNCLQHEMRN 619
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 252/580 (43%), Gaps = 75/580 (12%)
Query: 47 VTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM--- 103
V S I++ AK+GR+ AR++F+ MP+ + V+WN+M+ Y +EA LF ++
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 104 -FRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACW---NAMVAGYAKIGNYNEA 159
+PD +S+ +++ G ++ R++ L+ A N+++ Y K + A
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 160 KKLLDAM--PSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDD 217
K+ M S+N V+W S+L Y + A F M +R +WN+M+ G+
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 218 LDSAWKFFQKIPE---------------------QNVV------------SWV------- 237
L+S F+++ E NVV W
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 238 TMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVS 297
++LS Y + G +A R + + + V+WN++I A ++ G+ E+A +F PE+N V+
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 298 WTTMIDGYVRIAKLDEARRLLDQMPYKNI-------AAQTAMISG--YVQNKRMDEANQI 348
WTTMI GY R ++A R +M + A SG + + +M I
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 349 FDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAV 408
+ V N ++ YA+CG + EA F + NKD+V+WNTM+ + D A+
Sbjct: 365 HCGFQGYAYV-GNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQAL 423
Query: 409 KIFEEM---GKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGK---KADHSTLACAL 462
K+++ M G + + V++ L++ + + IF M ++ + + DH T C +
Sbjct: 424 KLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVT--CMI 481
Query: 463 SACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAEL------LFKDA 516
L + + S V D +S T+ C + EL + K A
Sbjct: 482 DMFGRGGHLAEAKDL--ATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIA 539
Query: 517 DPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDP 556
+P + +S+ L Y G E + EMV G+ P
Sbjct: 540 EPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTP 579
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 181/393 (46%), Gaps = 35/393 (8%)
Query: 18 QNKKITQLGKSGRVEEAIKIFSQM--SQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQR 75
N I GK A K+F M +N VT+ S++ AY + A +F +MP+R
Sbjct: 108 NNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKR 167
Query: 76 NLVSWNSMIAGYLHNDKVKEARELFDKM----FRPDLFSWA-LMITCYTRKGELEKAREL 130
+WN MI+G+ H K++ LF +M F+PD ++++ LM C + R +
Sbjct: 168 VAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMV 227
Query: 131 FD-LLPNKEDTA--CWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEM 187
+L N +A N++++ Y K+G+ ++A + L+++ VSWNS++ K GE
Sbjct: 228 HAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGET 287
Query: 188 HLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVS-------WVTML 240
A + F E+++V+W M+ GY D + A +FF ++ + V S +
Sbjct: 288 EKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 241 SGYA--RNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSW 298
SG A +G+M+ + V NA++ Y + G I+EA R F ++ ++ VSW
Sbjct: 348 SGLALLGHGKMIHGCLIHCGFQGYAYVG-NALVNLYAKCGDIKEADRAFGDIANKDLVSW 406
Query: 299 TTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYV----QNKRMDEANQIFDK--- 351
TM+ + D+A +L D M I G + + ++E IF+
Sbjct: 407 NTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVK 466
Query: 352 -----IGTHDVVCWNVMIKGYAQCGRMDEAINL 379
+ V C MI + + G + EA +L
Sbjct: 467 DYRIPLEVDHVTC---MIDMFGRGGHLAEAKDL 496
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
S V +N ++ K G ++A++ + V++NS+I A K G A ++F
Sbjct: 238 SAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLA 297
Query: 73 PQRNLVSWNSMIAGYLHNDKVKEARELFDKMFR----PDLFSWALMITCYTRKGELEKAR 128
P++N+V+W +MI GY N ++A F +M + D F++ ++ + L +
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK 357
Query: 129 ELFDLLPN---KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNG 185
+ L + + NA+V YAK G+ EA + + +K++VSWN+ML + +G
Sbjct: 358 MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHG 417
Query: 186 EMHLASKFFEAMEERDVVSWNLMLDGYVELDD----LDSAWKFFQ------KIPEQNVVS 235
A K ++ M + N+ G + ++ F+ +IP + V
Sbjct: 418 LADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLE--VD 475
Query: 236 WVT-MLSGYARNGRMLEARRL 255
VT M+ + R G + EA+ L
Sbjct: 476 HVTCMIDMFGRGGHLAEAKDL 496
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 494 NSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVA 553
S I AK GRI +A +F +D ++WN+++ Y+ G EAI LF ++
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 554 PDPVTFIGVLSACSHVGLVDGGLKL 578
PD +F +LS C+ +G V G K+
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKI 92
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 14 YVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMP 73
Y + N + K G ++EA + F ++ K+ V++N+M+ A+ +G + A KL++ M
Sbjct: 371 YAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 74 QRNLVSWNSMIAGYL----HNDKVKEARELFDKMFRP-----DLFSWALMITCYTRKGEL 124
+ N G L H+ V+E +F+ M + ++ MI + R G L
Sbjct: 431 ASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHL 490
Query: 125 EKARELF----DLLPNKEDTACWNAMVA 148
+A++L L+ + + + W ++
Sbjct: 491 AEAKDLATTYSSLVTDSSNNSSWETLLG 518
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 346 bits (887), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 206/685 (30%), Positives = 341/685 (49%), Gaps = 84/685 (12%)
Query: 123 ELEKARELFDLLPNKEDTACWNA----------------MVAGYAKIGNYNEAKKLLDAM 166
E++ LF N + C +A +V Y +GN A+ D +
Sbjct: 53 EIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHI 112
Query: 167 PSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQ 226
++++ +WN M+SGY + G + F ++S L D S K +
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLF----MLSSGLTPD----YRTFPSVLKACR 164
Query: 227 KIPEQNVVSWVTMLSG--------------YARNGRMLEARRLFDQMPIRNVVAWNAMIA 272
+ + N + + + G Y+R + AR LFD+MP+R++ +WNAMI+
Sbjct: 165 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 273 AYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRL----LDQMPYKNIAA 328
Y Q G +EA L + + V+ +++ + + + +
Sbjct: 225 GYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 329 QTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM----- 383
+I Y + R+ + ++FD++ D++ WN +IK Y + AI+LF++M
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 384 -----------------------------------VNKDIVTWNTMIAGYAQIRQMDDAV 408
+DI N ++ YA++ +D A
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 409 KIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGK-KADHSTLACALSACAH 467
+F + + +SWN +ISG+ QN F +A++++ +M +EG+ A+ T L AC+
Sbjct: 405 AVFNWL-PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 468 LAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSL 527
AL+ G ++H +K+G D+FV SL MY KCGR+++A LF V+ + WN+L
Sbjct: 464 AGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTL 523
Query: 528 IAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYA 587
IA + +G+ +A+ LF+EM+ EGV PD +TF+ +LSACSH GLVD G FE M Y
Sbjct: 524 IACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYG 583
Query: 588 IEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAV 647
I P ++HY CM+D+ RAG+L+ A + +K M ++P+A IWG LL ACR+H N+ LG+IA
Sbjct: 584 ITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIAS 643
Query: 648 EKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTF 707
E L E+EP+ + LLSNM+A AG+W+ V+++R G G +K PG S +EV N++ F
Sbjct: 644 EHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVF 703
Query: 708 LSGDPKQCRTAEICNTLKTLAAQIR 732
+G+ E+ L L A+++
Sbjct: 704 YTGNQTHPMYEEMYRELTALQAKLK 728
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 192/436 (44%), Gaps = 85/436 (19%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISA----------------------- 55
N I+ +SG +EA+ + + + ++VT S++SA
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279
Query: 56 ------------YAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM 103
YA+ GR+ D +K+F++M R+L+SWNS+I Y N++ A LF +M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 104 ----FRPDLFSWALMITCYTRKGELEKARELFDLLPNK----EDTACWNAMVAGYAKIGN 155
+PD + + + ++ G++ R + K ED NA+V YAK+G
Sbjct: 340 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 156 YNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVV-----SWNLMLD 210
+ A+ + + +P+ +++SWN+++SGY +NG A + + MEE + +W +L
Sbjct: 400 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459
Query: 211 GYVELDDLDSAWKFFQKIPEQNV---VSWVTMLSG-YARNGRMLEARRLFDQMPIRNVVA 266
+ L K ++ + + V VT L+ Y + GR+ +A LF Q+P N V
Sbjct: 460 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 519
Query: 267 WNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNI 326
WN +IA + G E+A LF EM LDE + D + +
Sbjct: 520 WNTLIACHGFHGHGEKAVMLFKEM--------------------LDEGVK-PDHITF--- 555
Query: 327 AAQTAMISGYVQNKRMDEANQIFDKIGTHDVVC-----WNVMIKGYAQCGRMDEAINLFR 381
++S + +DE F+ + T + + M+ Y + G+++ A+ +
Sbjct: 556 ---VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 382 QM-VNKDIVTWNTMIA 396
M + D W +++
Sbjct: 613 SMSLQPDASIWGALLS 628
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 26 GKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNL----VSWN 81
GK GR+E+A+ +F Q+ + N+V +N++I+ + +G A LF++M + +++
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 82 SMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKARELFDLLPN 136
++++ H+ V E + F+ M P L + M+ Y R G+LE A + +
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 137 KEDTACWNAMVAGYAKIGNYNEAK 160
+ D + W A+++ GN + K
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGK 640
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 343 bits (879), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 211/644 (32%), Positives = 341/644 (52%), Gaps = 60/644 (9%)
Query: 146 MVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV--V 203
+V+ + + G+ +EA ++ + + SK V +++ML G+ K ++ A +FF M DV V
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 204 SWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTM----LSG----YARNGRMLEARRL 255
+N V D+ + + ++I V S ++ ++G YA+ ++ EAR++
Sbjct: 135 VYNFTYLLKVCGDE--AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 256 FDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN-------------PVSW---- 298
FD+MP R++V+WN ++A Y Q G A + M E N VS
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 299 ----------------------TTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGY 336
T ++D Y + L+ AR+L D M +N+ + +MI Y
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 337 VQNKRMDEANQIFDKIGTHDVVCWNVMIKGY----AQCGRMDEAINLFRQMV----NKDI 388
VQN+ EA IF K+ V +V + G A G ++ + + V ++++
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 389 VTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQ 448
N++I+ Y + +++D A +F ++ + R VSWNA+I GF QN +DAL F M
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 449 EGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQN 508
K D T ++A A L+ + IH + ++S ++FV +L+ MYAKCG I
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 509 AELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSH 568
A L+F V +WN++I GY +G A++LFEEM + P+ VTF+ V+SACSH
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551
Query: 569 VGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWG 628
GLV+ GLK F M E Y+IE ++HY M+DLL RAGRL+EA++ + M +KP ++G
Sbjct: 552 SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611
Query: 629 TLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSG 688
+LGAC++H+N+ A E+L EL P + LL+N++ A W++V +VRVSM G
Sbjct: 612 AMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQG 671
Query: 689 AQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
+K PGCS +E+KN++H+F SG + +I L+ L I+
Sbjct: 672 LRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 226/500 (45%), Gaps = 69/500 (13%)
Query: 16 FNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQR 75
F Q K ++ + G V+EA ++F + K V Y++M+ +AK ++ A + F +M
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 76 NL--VSWNSMIAGYLHNDKV-----KEARELFDKM-FRPDLFSWALMITCYTRKGELEKA 127
++ V +N + D+ KE L K F DLF+ + Y + ++ +A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 128 RELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNI---------------- 171
R++FD +P + D WN +VAGY++ G A +++ +M +N+
Sbjct: 190 RKVFDRMPER-DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 172 ---------VSWNSMLSG--------------YTKNGEMHLASKFFEAMEERDVVSWNLM 208
+ +M SG Y K G + A + F+ M ER+VVSWN M
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 209 LDGYVELDDLDSAWKFFQKIPEQNV----VSWVTMLSGYARNGRMLEARRLFDQMPI--- 261
+D YV+ ++ A FQK+ ++ V VS + L A G LE R ++ +
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD-LERGRFIHKLSVELG 367
Query: 262 --RNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLD 319
RNV N++I+ Y + +++ AA +F ++ R VSW MI G+ + + +A
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 320 QMPYKNIAAQT----AMISGYVQNKRMDEANQIFDKIG----THDVVCWNVMIKGYAQCG 371
QM + + T ++I+ + A I + +V ++ YA+CG
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 372 RMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGK---RRNTVSWNALIS 428
+ A +F M + + TWN MI GY A+++FEEM K + N V++ ++IS
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 429 GFLQNEFHLDALKIFVLMTQ 448
+ LK F +M +
Sbjct: 548 ACSHSGLVEAGLKCFYMMKE 567
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 161/312 (51%), Gaps = 44/312 (14%)
Query: 307 RIAKLDEARRLLDQM----PYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNV 362
R + L E R++L + Y+ QT ++S + + +DEA ++F+ I + V ++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 363 MIKGYAQCGRMDEAINLFRQMVNKDI------VTWNTMIAG------------------- 397
M+KG+A+ +D+A+ F +M D+ T+ + G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 398 --------------YAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIF 443
YA+ RQ+++A K+F+ M R+ VSWN +++G+ QN AL++
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRM-PERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 444 VLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKC 503
M +E K T+ L A + L + +G++IH A++SG+ + + + +L+ MYAKC
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKC 284
Query: 504 GRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVL 563
G ++ A LF +V+SWNS+I Y N N EA+ +F++M+ EGV P V+ +G L
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 564 SACSHVGLVDGG 575
AC+ +G ++ G
Sbjct: 345 HACADLGDLERG 356
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 163/373 (43%), Gaps = 45/373 (12%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMF----R 105
+++ YAK G + AR+LF+ M +RN+VSWNSMI Y+ N+ KEA +F KM +
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 106 PDLFSWALMITCYTRKGELEKARELFDL---LPNKEDTACWNAMVAGYAKIGNYNEAKKL 162
P S + G+LE+ R + L L + + N++++ Y K + A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 163 LDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEER----DVVSWNLMLDGYVELDDL 218
+ S+ +VSWN+M+ G+ +NG A +F M R D ++ ++ EL
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 219 DSA-W---KFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAY 274
A W + ++NV ++ YA+ G ++ AR +FD M R+V WNAMI Y
Sbjct: 455 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514
Query: 275 VQRGQIEEAARLFIEMP----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQT 330
G + A LF EM + N V++ ++I ++ + M
Sbjct: 515 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK-------- 566
Query: 331 AMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVT 390
Y MD + D +G + GR++EA + QM K V
Sbjct: 567 ---ENYSIELSMDHYGAMVDLLG---------------RAGRLNEAWDFIMQMPVKPAVN 608
Query: 391 WNTMIAGYAQIRQ 403
+ G QI +
Sbjct: 609 VYGAMLGACQIHK 621
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 17/269 (6%)
Query: 44 KNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM 103
+N NS+IS Y K V+ A +F ++ R LVSWN+MI G+ N + +A F +M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 104 ----FRPDLFSWALMITCYTRKGELEKARELFDLLPNK---EDTACWNAMVAGYAKIGNY 156
+PD F++ +IT A+ + ++ ++ A+V YAK G
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 157 NEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV----VSWNLMLDGY 212
A+ + D M +++ +WN+M+ GY +G A + FE M++ + V++ ++
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 213 VELDDLDSAWKFFQKIPEQNVVS-----WVTMLSGYARNGRMLEARRLFDQMPIRNVV-A 266
+++ K F + E + + M+ R GR+ EA QMP++ V
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609
Query: 267 WNAMIAAYVQRGQIEEAARLFIEMPERNP 295
+ AM+ A + A + + E NP
Sbjct: 610 YGAMLGACQIHKNVNFAEKAAERLFELNP 638
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 27/266 (10%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNL- 77
N I+ K V+ A +F ++ + V++N+MI +A+NGR DA F QM R +
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 78 ---VSWNSMIAGYLHNDKVKEARELFDKMFRP----DLFSWALMITCYTRKGELEKAREL 130
++ S+I A+ + + R ++F ++ Y + G + AR +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 131 FDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNI----VSWNSMLSGYTKNGE 186
FD++ + T WNAM+ GY G A +L + M I V++ S++S + +G
Sbjct: 496 FDMMSERHVTT-WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 187 MHLASKFFEAMEERDVVSWNLMLDGYVELDD-------LDSAWKFFQKIPEQNVVSWVTM 239
+ K F M+E S L +D Y + D L+ AW F ++P + V+
Sbjct: 555 VEAGLKCFYMMKEN--YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 240 LSGYA---RNGRMLE--ARRLFDQMP 260
+ G +N E A RLF+ P
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNP 638
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMP- 73
VF + K G + A IF MS+++ T+N+MI Y +G A +LFE+M
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 74 ---QRNLVSWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELE 125
+ N V++ S+I+ H+ V+ + F M + + M+ R G L
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 592
Query: 126 KARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKK 161
+A + +P K + AM+ N N A+K
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 628
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 459 ACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADP 518
A L C+ L L RQI L K+G + F L++++ + G + A +F+ D
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 519 VDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSAC 566
+ +++++ G+A + +A++ F M + V P F +L C
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC 145
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 249/822 (30%), Positives = 381/822 (46%), Gaps = 143/822 (17%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGY--------------------LH 89
N++IS Y+K G + AR++F++MP R+LVSWNS++A Y L
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 90 NDKVKEARELFDKMFRPDLFS---WA---------------------LMITCYTRKGELE 125
D V +R M + L S WA ++ Y + G+++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 126 KARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKN--------------- 170
+ + LF+ +P + D WN M+ Y ++G EA L A S
Sbjct: 198 EGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARIS 256
Query: 171 -----------------------IVSWNSMLSGYTKNGEMHLASKFFEAMEERDV----V 203
I+ N LS Y +G+ K F M E DV V
Sbjct: 257 GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQV 316
Query: 204 SWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVT----MLSGYARNGRMLEARRLFDQM 259
++ LML V++D L + + + +T +++ Y + + AR +FD M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 260 PIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPE--RNPVSWTTMIDGYVRIAKLDEARRL 317
R++++WN++IA Q G EA LF+++ P +T M + L E L
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT-MTSVLKAASSLPEGLSL 435
Query: 318 LDQMPYKNIA--------AQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQ 369
Q+ I TA+I Y +N+ M EA +F++ D+V WN M+ GY Q
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQ 494
Query: 370 CGRMDEAINLFRQM------------------------VNK-------------DIVTW- 391
+ + LF M +N+ D+ W
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 392 -NTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEG 450
+ ++ Y + M A F+ + + V+W +ISG ++N A +F M G
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSI-PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 451 KKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAE 510
D T+A A + L AL+ GRQIH A+K ND FVG SL+ MYAKCG I +A
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 511 LLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVG 570
LFK + +++ +WN+++ G A +G E ++LF++M G+ PD VTFIGVLSACSH G
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 571 LVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTL 630
LV K M Y I+P +EHY+C+ D L RAG + +A +++ M ++ +A ++ TL
Sbjct: 734 LVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 631 LGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQ 690
L ACR+ + + G+ KL ELEP +S Y LLSNM+A A +WDE++ R M+G +
Sbjct: 794 LAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVK 853
Query: 691 KQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
K PG SWIEVKN+IH F+ D +T I +K + I+
Sbjct: 854 KDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIK 895
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 471 LQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAG 530
L LG+ H + + F+ N+LI+MY+KCG + A +F D++SWNS++A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 531 YA-----INGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLV 572
YA + N +A LF + + V +T +L C H G V
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNL---- 77
+ K G +++A +F ++ N +N+M+ A++G + +LF+QM +
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK 719
Query: 78 VSWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKARELFD 132
V++ +++ H+ V EA + M +P++ ++ + R G +++A L +
Sbjct: 720 VTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIE 779
Query: 133 LLPNKEDTACWNAMVAGYAKIGNYNEAKKL------LDAMPSKNIVSWNSMLSGYTKNGE 186
+ + + + ++A G+ K++ L+ + S V ++M + +K E
Sbjct: 780 SMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDE 839
Query: 187 MHLA 190
M LA
Sbjct: 840 MKLA 843
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 226/766 (29%), Positives = 377/766 (49%), Gaps = 86/766 (11%)
Query: 26 GKSGRVEEAIKIFSQMS-----QKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSW 80
GK +E KI +S + + V +I+ YA G +D+R +F+ + +NL W
Sbjct: 95 GKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQW 154
Query: 81 NSMIAGYLHNDKVKEARELFDKMFR-----PDLFSWALMITCYTRKGELEKARELFDLLP 135
N++I+ Y N+ E E F +M PD F++ +I ++ + L+
Sbjct: 155 NAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVV 214
Query: 136 NK---EDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASK 192
ED NA+V+ Y G +A +L D MP +N+VSWNSM+ ++ NG + +
Sbjct: 215 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG---FSEE 271
Query: 193 FF----EAMEER-------DVVSWNLML-----DGYVELDDLDSAWKFFQKIPEQNVVSW 236
F E MEE DV + +L + + L W ++ ++ V++
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN- 330
Query: 237 VTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIE---EAARLFIEMPER 293
++ Y++ G + A+ +F +NVV+WN M+ + G + R + E
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 294 NPVSWTTMI--------DGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEA 345
T++ + ++ K L + Y + A A ++ Y + + A
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN-AFVASYAKCGSLSYA 449
Query: 346 NQIFDKIGTHDVVCWNVMIKGYAQCG---------------------------------- 371
++F I + V WN +I G+AQ
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 372 ---RMDEAINLF--RQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNAL 426
R+ + ++ F R + +D+ + ++++ Y ++ +F+ M + ++ VSWN +
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTV 568
Query: 427 ISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGY 486
I+G+LQN F AL +F M G + ++ AC+ L +L+LGR+ H A+K
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 487 VNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEE 546
+D F+ SLI MYAK G I + +F SWN++I GY I+G A EAIKLFEE
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 547 MVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAG 606
M G PD +TF+GVL+AC+H GL+ GL+ + M + ++P ++HYAC+ID+L RAG
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 607 RLDEAFEMV-KGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLS 665
+LD+A +V + M + + GIW +LL +CR+HQN+++G KL ELEP+K Y LLS
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 808
Query: 666 NMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGD 711
N++A G+W++V KVR M +K GCSWIE+ ++ +F+ G+
Sbjct: 809 NLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 854
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 152/619 (24%), Positives = 281/619 (45%), Gaps = 92/619 (14%)
Query: 112 ALMITCYTRKGELEKARELFDLLPN----KEDTACWNAMVAGYAKIGNYNEAKKLLDAMP 167
L++ ++ ++E R++ L+ + D ++ YA G+ ++++ + DA+
Sbjct: 88 GLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 147
Query: 168 SKNIVSWNSMLSGYTKNGEMH--LASKFFEAMEERDVV----SWNLMLDGYVELDDLDSA 221
SKN+ WN+++S Y++N E++ + F E + D++ ++ ++ + D+
Sbjct: 148 SKNLFQWNAVISSYSRN-ELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 222 WKFFQKIPEQNVVSWV----TMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQR 277
+ + +V V ++S Y +G + +A +LFD MP RN+V+WN+MI +
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 278 GQIEEAARLFIEMPERNP--------VSWTTMIDGYVRIAKLDEARRL--------LDQM 321
G EE+ L EM E N + T++ R ++ + + LD
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD-- 324
Query: 322 PYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFR 381
K + A++ Y + + A IF +VV WN M+ G++ G ++ R
Sbjct: 325 --KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 382 QM------VNKDIVTW-----------------------------------NTMIAGYAQ 400
QM V D VT N +A YA+
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 401 IRQMDDAVKIFEEMGKRRNTV-SWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLA 459
+ A ++F G R TV SWNALI G Q+ +L + M G D T+
Sbjct: 443 CGSLSYAQRVFH--GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 460 CALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPV 519
LSAC+ L +L+LG+++H I++ DLFV S++++Y CG + + LF +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 520 DVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLF 579
++SWN++I GY NG A+ +F +MV+ G+ ++ + V ACS + + G +
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-- 618
Query: 580 ECMTEVYAIEPLVE---HYAC-MIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACR 635
YA++ L+E AC +ID+ ++ G + ++ ++ G+K K A W ++
Sbjct: 619 ---AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYG 674
Query: 636 MHQNIKLGRIAVEKLSELE 654
+H L + A++ E++
Sbjct: 675 IH---GLAKEAIKLFEEMQ 690
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWN 81
I K+G + ++ K+F+ + +K+T ++N+MI Y +G +A KLFE+M + +
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 82 SMIAGYL----HNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKA-RELF 131
G L H+ + E D+M +P+L +A +I R G+L+KA R +
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 132 DLLPNKEDTACWNAMVAGYAKIGNYNE-----AKKLLDAMPSK--NIVSWNSMLSGYTK 183
+ + + D W ++++ +I E A KL + P K N V +++ +G K
Sbjct: 759 EEMSEEADVGIWKSLLSS-CRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGK 816
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 326/627 (51%), Gaps = 88/627 (14%)
Query: 150 YAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLML 209
YA G+ A+KL + MP +++S+N ++ Y + G H A F M V +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV---KCVP 115
Query: 210 DGYV---------ELDDLDSAWKFFQKIPEQNVVSWV--------TMLSGYARNGRMLEA 252
DGY EL + +I + SW +L+ Y G++ A
Sbjct: 116 DGYTYPFVAKAAGELKSMKLGLVVHGRI----LRSWFGRDKYVQNALLAMYMNFGKVEMA 171
Query: 253 RRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLF-------IEMPERNPVSWTTMIDGY 305
R +FD M R+V++WN MI+ Y + G + +A +F +++ VS + G+
Sbjct: 172 RDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP-VCGH 230
Query: 306 VR-------IAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVV 358
++ + KL E +RL D++ KN A+++ Y++ RMDEA +FD++ DV+
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKN-----ALVNMYLKCGRMDEARFVFDRMERRDVI 285
Query: 359 CWNVMIKGYAQCGRMDEAINL--------------------------------------- 379
W MI GY + G ++ A+ L
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
Query: 380 FRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDA 439
RQ V DI+ ++I+ YA+ +++D ++F K +T W+A+I+G +QNE DA
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKY-HTGPWSAIIAGCVQNELVSDA 404
Query: 440 LKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITM 499
L +F M +E + + +TL L A A LA L+ IH K+G+++ L L+ +
Sbjct: 405 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHV 464
Query: 500 YAKCGRIQNAELLF----KDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPD 555
Y+KCG +++A +F + DV+ W +LI+GY ++G+ A+++F EMV GV P+
Sbjct: 465 YSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPN 524
Query: 556 PVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMV 615
+TF L+ACSH GLV+ GL LF M E Y HY C++DLL RAGRLDEA+ ++
Sbjct: 525 EITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLI 584
Query: 616 KGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWD 675
+ +P + +WG LL AC H+N++LG +A KL ELEP+ T Y LL+N++A GRW
Sbjct: 585 TTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWK 644
Query: 676 EVEKVRVSMEGSGAQKQPGCSWIEVKN 702
++EKVR ME G +K+PG S IE+++
Sbjct: 645 DMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 149/571 (26%), Positives = 260/571 (45%), Gaps = 87/571 (15%)
Query: 55 AYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFR------PDL 108
YA G + ARKLFE+MPQ +L+S+N +I Y+ +A +F +M PD
Sbjct: 58 TYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDG 117
Query: 109 FSWALMITCYTRKGELEKARELFDLLPNK-------EDTACWNAMVAGYAKIGNYNEAKK 161
+++ + GEL K+ +L ++ + D NA++A Y G A+
Sbjct: 118 YTYPFVAKA---AGEL-KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARD 173
Query: 162 LLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV----VSWNLMLDGYVELDD 217
+ D M +++++SWN+M+SGY +NG M+ A F+ M V + ML L D
Sbjct: 174 VFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKD 233
Query: 218 LDSAWKFFQKIPEQNVVSWV----TMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAA 273
L+ + + E+ + + +++ Y + GRM EAR +FD+M R+V+ W MI
Sbjct: 234 LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMING 293
Query: 274 YVQRGQIEEAARLF----IEMPERNPVSWTTMIDGYVRIAKLDEARRL----LDQMPYKN 325
Y + G +E A L E N V+ +++ K+++ + L + Q Y +
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSD 353
Query: 326 IAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM-- 383
I +T++IS Y + KR+D ++F + W+ +I G Q + +A+ LF++M
Sbjct: 354 IIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Query: 384 --VNKDIVTWNTMIAGY---AQIRQ--------------------------------MDD 406
V +I T N+++ Y A +RQ ++
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLES 473
Query: 407 AVKIF---EEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALS 463
A KIF +E K ++ V W ALISG+ + +AL++F+ M + G + T AL+
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALN 533
Query: 464 ACAHLAALQLGRQIHHLAIKSGYVNDLFVGN---SLITMYAKCGRIQNAELLFKDA--DP 518
AC+H ++ G + ++ + L N ++ + + GR+ A L +P
Sbjct: 534 ACSHSGLVEEGLTLFRFMLE--HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Query: 519 VDVISWNSLIAGYAINGNA----TEAIKLFE 545
+ W +L+A + N A KLFE
Sbjct: 592 TSTV-WGALLAACVTHENVQLGEMAANKLFE 621
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 184/380 (48%), Gaps = 19/380 (5%)
Query: 299 TTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVV 358
+T+ Y + AR+L ++MP ++ + +I YV+ +A +F ++ + V
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 359 C------WNVMIKGYAQCGRMDEAI----NLFRQMVNKDIVTWNTMIAGYAQIRQMDDAV 408
C + + K + M + + R +D N ++A Y +++ A
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 409 KIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHL 468
+F+ M K R+ +SWN +ISG+ +N + DAL +F M E DH+T+ L C HL
Sbjct: 173 DVFDVM-KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHL 231
Query: 469 AALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLI 528
L++GR +H L + + + V N+L+ MY KCGR+ A +F + DVI+W +I
Sbjct: 232 KDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMI 291
Query: 529 AGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGG--LKLFECMTEVY 586
GY +G+ A++L M EGV P+ VT ++S C V+ G L + +VY
Sbjct: 292 NGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 587 AIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIK--LGR 644
+ + ++E +I + ++ R+D F + G K + G W ++ C ++ + LG
Sbjct: 352 S-DIIIE--TSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGCVQNELVSDALGL 407
Query: 645 IAVEKLSELEPQKTSCYALL 664
+ ++EP + +LL
Sbjct: 408 FKRMRREDVEPNIATLNSLL 427
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 213/452 (47%), Gaps = 54/452 (11%)
Query: 238 TMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEM------- 290
T+ YA G + AR+LF++MP +++++N +I YV+ G +A +FI M
Sbjct: 54 TLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKC 113
Query: 291 -PERNPVSWTTMIDGYVRIAKLDEA--RRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQ 347
P+ + G ++ KL R+L ++ Q A+++ Y+ +++ A
Sbjct: 114 VPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARD 173
Query: 348 IFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKD-------------------- 387
+FD + DV+ WN MI GY + G M++A+ +F MVN+
Sbjct: 174 VFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKD 233
Query: 388 -------------------IVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALIS 428
I N ++ Y + +MD+A +F+ M +RR+ ++W +I+
Sbjct: 234 LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM-ERRDVITWTCMIN 292
Query: 429 GFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVN 488
G+ ++ +AL++ LM EG + + T+A +S C + G+ +H A++ +
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS 352
Query: 489 DLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMV 548
D+ + SLI+MYAKC R+ +F A W+++IAG N ++A+ LF+ M
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMR 412
Query: 549 MEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRL 608
E V P+ T +L A + + + + + +T+ + L + ++ + S+ G L
Sbjct: 413 REDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL-DAATGLVHVYSKCGTL 471
Query: 609 DEAFEMVKGMKIKPNAG---IWGTLLGACRMH 637
+ A ++ G++ K + +WG L+ MH
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 229/509 (44%), Gaps = 86/509 (16%)
Query: 29 GRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ-------------- 74
G + A K+F +M Q + ++YN +I Y + G +DA +F +M
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 75 -------------------RNLVSW--------NSMIAGYLHNDKVKEARELFDKMFRPD 107
R L SW N+++A Y++ KV+ AR++FD M D
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 108 LFSWALMITCYTRKGELEKARELFDLLPNKE---DTACWNAM--VAGYAK-------IGN 155
+ SW MI+ Y R G + A +FD + N+ D A +M V G+ K +
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 156 YNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVEL 215
E K+L D + K N++++ Y K G M A F+ ME RDV++W M++GY E
Sbjct: 243 LVEEKRLGDKIEVK-----NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 216 DDLDSAWKF-----FQKI-PEQNVVSWVTMLSGYA---RNGRMLEARRLFDQMPIRNVVA 266
D+++A + F+ + P ++ + + G A +G+ L + Q+ +++
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV-YSDIII 356
Query: 267 WNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYK-- 324
++I+ Y + +++ R+F + + W+ +I G V+ + +A L +M +
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 325 --NIAAQTAMISGYVQNKRMDEANQI---FDKIG-THDVVCWNVMIKGYAQCGRMDEAIN 378
NIA +++ Y + +A I K G + ++ Y++CG ++ A
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 379 LF----RQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEM---GKRRNTVSWNALISGFL 431
+F + +KD+V W +I+GY +A+++F EM G N +++ + ++
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 432 QNEFHLDALKIFVLMTQEGK---KADHST 457
+ + L +F M + K +++H T
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 228/504 (45%), Gaps = 55/504 (10%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRP--- 106
N++++ Y G+V AR +F+ M R+++SWN+MI+GY N + +A +FD M
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 107 -DLFSWALMITCYTRKGELEKARELFDLLPNK---EDTACWNAMVAGYAKIGNYNEAKKL 162
D + M+ +LE R + L+ K + NA+V Y K G +EA+ +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 163 LDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVEL--DDLD- 219
D M +++++W M++GYT++G++ A + M+ V + + V + D L
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 220 ------SAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAA 273
W Q++ +++ +++S YA+ R+ R+F + W+A+IA
Sbjct: 336 NDGKCLHGWAVRQQV-YSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Query: 274 YVQRGQIEEAARLFIEMP----ERNPVSWTTMIDGYVRIAKLDEARRL---LDQMPY-KN 325
VQ + +A LF M E N + +++ Y +A L +A + L + + +
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS 454
Query: 326 IAAQTAMISGYVQNKRMDEANQIFDKI----GTHDVVCWNVMIKGYAQCGRMDEAINLFR 381
+ A T ++ Y + ++ A++IF+ I + DVV W +I GY G A+ +F
Sbjct: 455 LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFM 514
Query: 382 QMVNKDI----VTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWN---ALISGFLQNE 434
+MV + +T+ + + + +++ + +F M + T++ + I L
Sbjct: 515 EMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRA 574
Query: 435 FHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLF--- 491
LD + + L+T + + L+AC +QLG N LF
Sbjct: 575 GRLD--EAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA---------ANKLFELE 623
Query: 492 ---VGNSLI--TMYAKCGRIQNAE 510
GN ++ +YA GR ++ E
Sbjct: 624 PENTGNYVLLANIYAALGRWKDME 647
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 181/446 (40%), Gaps = 100/446 (22%)
Query: 5 LKSIGNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVND 64
L+S + YV QN + G+VE A +F M ++ +++N+MIS Y +NG +ND
Sbjct: 144 LRSWFGRDKYV--QNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 65 ARKLFEQM-------PQRNLVSW--------------------------------NSMIA 85
A +F+ M +VS N+++
Sbjct: 202 ALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 86 GYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLL------PNK-- 137
YL ++ EAR +FD+M R D+ +W MI YT G++E A EL L+ PN
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 138 --------------EDTAC---W-------------NAMVAGYAKIGNYNEAKKLLDAMP 167
D C W ++++ YAK + ++
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 168 SKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV----VSWNLMLDGYVELDDLDSAWK 223
+ W+++++G +N + A F+ M DV + N +L Y L DL A
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 224 FFQKIPEQNVVSWVTMLSG----YARNGRMLEARRLF----DQMPIRNVVAWNAMIAAYV 275
+ + +S + +G Y++ G + A ++F ++ ++VV W A+I+ Y
Sbjct: 442 IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 276 QRGQIEEAARLFIEMPER----NPVSWTTMIDGYVRIAKLDEARRLLDQM--PYKNIAAQ 329
G A ++F+EM N +++T+ ++ ++E L M YK +A
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARS 561
Query: 330 ---TAMISGYVQNKRMDEANQIFDKI 352
T ++ + R+DEA + I
Sbjct: 562 NHYTCIVDLLGRAGRLDEAYNLITTI 587
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 104/259 (40%), Gaps = 42/259 (16%)
Query: 467 HLAALQL---GRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVIS 523
H AA Q + +H I G V+ + ++L YA CG I A LF++ ++S
Sbjct: 24 HFAATQSISKTKALHCHVITGGRVSGHIL-STLSVTYALCGHITYARKLFEEMPQSSLLS 82
Query: 524 WNSLIAGYAINGNATEAIKLFEEMVMEGV--APDPVTFIGVLSACSH-----VGLVDGGL 576
+N +I Y G +AI +F MV EGV PD T+ V A +GLV G
Sbjct: 83 YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGR 142
Query: 577 KL-----------------------FECMTEVYAI--EPLVEHYACMIDLLSRAGRLDEA 611
L E +V+ + V + MI R G +++A
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDA 202
Query: 612 FEMVKGM---KIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELE--PQKTSCYALLSN 666
M M + + ++L C +++++GR V KL E + K L N
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR-NVHKLVEEKRLGDKIEVKNALVN 261
Query: 667 MHAEAGRWDEVEKVRVSME 685
M+ + GR DE V ME
Sbjct: 262 MYLKCGRMDEARFVFDRME 280
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 214/746 (28%), Positives = 358/746 (47%), Gaps = 122/746 (16%)
Query: 73 PQRNLVSWNSMIAGYLHNDKVKEARELFDKM----FRPDLFSWALMITCYTRKGELEKAR 128
P +N+ WNS+I + N EA E + K+ PD +++ +I +
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVI---------KACA 117
Query: 129 ELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMH 188
LFD A++G+ +++LD ++ N+++ Y++ G +
Sbjct: 118 GLFD------------------AEMGDL-VYEQILDMGFESDLFVGNALVDMYSRMGLLT 158
Query: 189 LASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQK------IPEQNVVSWV----- 237
A + F+ M RD+VSWN ++ GY + A + + + +P+ VS V
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218
Query: 238 ----------------------------TMLSGYARNGRMLEARRLFDQMPIRNVVAWNA 269
+++ Y + R +ARR+FD+M +R+ V++N
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNT 278
Query: 270 MIAAYVQRGQIEEAARLFIE-----MPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYK 324
MI Y++ +EE+ R+F+E P+ VS G++R L A+ + + M
Sbjct: 279 MICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLR--DLSLAKYIYNYMLKA 336
Query: 325 NIAAQTA----MISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLF 380
++ +I Y + M A +F+ + D V WN +I GY Q G + EA+ LF
Sbjct: 337 GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 381 RQMV----NKDIVTW-----------------------------------NTMIAGYAQI 401
+ M+ D +T+ N +I YA+
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKC 456
Query: 402 RQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACA 461
++ D++KIF MG +TV+WN +IS ++ L++ M + D +T
Sbjct: 457 GEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 462 LSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDV 521
L CA LAA +LG++IH ++ GY ++L +GN+LI MY+KCG ++N+ +F+ DV
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575
Query: 522 ISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFEC 581
++W +I Y + G +A++ F +M G+ PD V FI ++ ACSH GLVD GL FE
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK 635
Query: 582 MTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIK 641
M Y I+P++EHYAC++DLLSR+ ++ +A E ++ M IKP+A IW ++L ACR +++
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDME 695
Query: 642 LGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVK 701
++ EL P L SN +A +WD+V +R S++ K PG SWIEV
Sbjct: 696 TAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVG 755
Query: 702 NQIHTFLSGDPKQCRTAEICNTLKTL 727
+H F SGD ++ I +L+ L
Sbjct: 756 KNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 207/466 (44%), Gaps = 63/466 (13%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
S +F N + + G + A ++F +M ++ V++NS+IS Y+ +G +A +++ ++
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 73 ------PQRNLVS---------------------------------WNSMIAGYLHNDKV 93
P VS N ++A YL +
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 94 KEARELFDKMFRPDLFSWALMITCYTRKGELEKARELF--DLLPNKEDTACWNAMVAGYA 151
+AR +FD+M D S+ MI Y + +E++ +F +L K D ++++
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACG 318
Query: 152 KIGNYNEAKKLLDAMPSKNIV----SWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNL 207
+ + + AK + + M V N ++ Y K G+M A F +ME +D VSWN
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 208 MLDGYVELDDLDSAWKFFQKI----PEQNVVSWVTMLSGYAR-----NGRMLEARRLFDQ 258
++ GY++ DL A K F+ + + + ++++ ++S R G+ L + +
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 259 MPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLL 318
+ I V+ NA+I Y + G++ ++ ++F M + V+W T+I VR ++
Sbjct: 439 ICIDLSVS-NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 319 DQMPYKNIAAQTA-------MISGYVQNKRMDEANQIFDKIGTH-DVVCWNVMIKGYAQC 370
QM + A M + + E + + G ++ N +I+ Y++C
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 371 GRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGK 416
G ++ + +F +M +D+VTW MI Y + + A++ F +M K
Sbjct: 558 GCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 301/553 (54%), Gaps = 21/553 (3%)
Query: 178 LSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVE-LDDLDSAWKFFQKIPEQ----N 232
++ + + A K F+ + + + +WN ++ Y D + S W F + E N
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 233 VVSWVTMLSGYARNGRMLEARRLFDQMPIR-----NVVAWNAMIAAYVQRGQIEEAARLF 287
++ ++ A + + L M ++ +V N++I Y G ++ A ++F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHG-MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 288 IEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQ----TAMISGYVQNKRMD 343
+ E++ VSW +MI+G+V+ D+A L +M +++ A ++S + + ++
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 344 EANQIFDKIGTHDV----VCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYA 399
Q+ I + V N M+ Y +CG +++A LF M KD VTW TM+ GYA
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 400 QIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIF-VLMTQEGKKADHSTL 458
+ A ++ M +++ V+WNALIS + QN +AL +F L Q+ K + TL
Sbjct: 310 ISEDYEAAREVLNSM-PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 459 ACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADP 518
LSACA + AL+LGR IH K G + V ++LI MY+KCG ++ + +F +
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 519 VDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKL 578
DV W+++I G A++G EA+ +F +M V P+ VTF V ACSH GLVD L
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
Query: 579 FECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQ 638
F M Y I P +HYAC++D+L R+G L++A + ++ M I P+ +WG LLGAC++H
Sbjct: 489 FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
Query: 639 NIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWI 698
N+ L +A +L ELEP+ + LLSN++A+ G+W+ V ++R M +G +K+PGCS I
Sbjct: 549 NLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
Query: 699 EVKNQIHTFLSGD 711
E+ IH FLSGD
Sbjct: 609 EIDGMIHEFLSGD 621
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 187/410 (45%), Gaps = 60/410 (14%)
Query: 65 ARKLFEQMPQRNLVSWNSMIAGYLHN-DKVKEARELFDKMFR----PDLFSWALMITCYT 119
ARK+F+++P+ N +WN++I Y D V D + P+ +++ +I
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 120 RKGELEKARELFDLLPNK---EDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNS 176
L + L + D N+++ Y G+ + A K+ + K++VSWNS
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 177 MLSGYTKNGEMHLASKFFEAMEERDV---------------------------------- 202
M++G+ + G A + F+ ME DV
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 203 VSWNL-----MLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFD 257
V+ NL MLD Y + ++ A + F + E++ V+W TML GYA + AR + +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 258 QMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMP-----ERNPVSWTTMIDGYVRIAKLD 312
MP +++VAWNA+I+AY Q G+ EA +F E+ + N ++ + + ++ L+
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 313 EARRLLDQMPYK----NIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYA 368
R + + N +A+I Y + ++++ ++F+ + DV W+ MI G A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 369 QCGRMDEAINLFRQM----VNKDIVTWNTMIAGYAQIRQMDDAVKIFEEM 414
G +EA+++F +M V + VT+ + + +D+A +F +M
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 202/482 (41%), Gaps = 95/482 (19%)
Query: 147 VAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLAS-KFFEAMEE------ 199
+A + + A+K+ D +P N +WN+++ Y + L+ F + + E
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 200 ---------------------------------RDVVSWNLMLDGYVELDDLDSAWKFFQ 226
DV N ++ Y DLDSA K F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 227 KIPEQNVVSWVTMLSGYARNGRMLEARRLFDQM--------------------PIR---- 262
I E++VVSW +M++G+ + G +A LF +M IR
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 263 ---------------NVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVR 307
N+ NAM+ Y + G IE+A RLF M E++ V+WTTM+DGY
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 308 IAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWN--VMIK 365
+ AR +L+ MP K+I A A+IS Y QN + +EA +F ++ + N ++
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 366 GYAQCGRMDEAINLFR---QMVNKDIVTWN-----TMIAGYAQIRQMDDAVKIFEEMGKR 417
+ C ++ A+ L R + K + N +I Y++ ++ + ++F + ++
Sbjct: 371 TLSACAQVG-ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EK 428
Query: 418 RNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQI 477
R+ W+A+I G + +A+ +F M + K + T AC+H + +
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
Query: 478 -HHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVIS--WNSLIAGYAIN 534
H + G V + ++ + + G ++ A + F +A P+ + W +L+ I+
Sbjct: 489 FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA-VKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 535 GN 536
N
Sbjct: 548 AN 549
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 208/486 (42%), Gaps = 84/486 (17%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDL- 108
NS+I Y G ++ A K+F + ++++VSWNSMI G++ +A ELF KM D+
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 109 ---FSWALMITCYTRKGELEKARELFDLLPNKE---DTACWNAMVAGYAKIGNYNEAKKL 162
+ +++ + LE R++ + + NAM+ Y K G+ +AK+L
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 163 LDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAW 222
DAM K+ V+W +ML GY + + A + +M ++D+V+WN ++ Y + + A
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 223 KFFQKIPEQ-----NVVSWVTMLSGYARNGRMLEARRLFDQMP---IR-NVVAWNAMIAA 273
F ++ Q N ++ V+ LS A+ G + R + + IR N +A+I
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 274 YVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMI 333
Y + G +E++ +F + +R+ W+ MI G +EA M YK
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV----DMFYK--------- 456
Query: 334 SGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM-VNKDIVT-- 390
M EAN + + +V C + G +DEA +LF QM N IV
Sbjct: 457 --------MQEANVKPNGVTFTNVFC------ACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 391 --WNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQ 448
+ ++ + ++ AVK E M +T W AL L A KI
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGAL----------LGACKI------ 546
Query: 449 EGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQN 508
H+ L A AC L L+ H+ L +YAK G+ +N
Sbjct: 547 ------HANLNLAEMACTRLLELEPRNDGAHVL--------------LSNIYAKLGKWEN 586
Query: 509 AELLFK 514
L K
Sbjct: 587 VSELRK 592
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 161/331 (48%), Gaps = 22/331 (6%)
Query: 12 GSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQ 71
GS VF N I G ++ A K+F+ + +K+ V++NSMI+ + + G + A +LF++
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 72 MPQRNLVSWNSMIAGYLHN----DKVKEARELF----DKMFRPDLFSWALMITCYTRKGE 123
M ++ + + + G L ++ R++ + +L M+ YT+ G
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 124 LEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTK 183
+E A+ LFD + K D W M+ GYA +Y A+++L++MP K+IV+WN+++S Y +
Sbjct: 283 IEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 184 NGEMHLASKFFEAMEERDVVSWNLM-----LDGYVELDDLDSAWKFFQKIPEQ----NVV 234
NG+ + A F ++ + + N + L ++ L+ I + N
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 235 SWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPE-- 292
++ Y++ G + ++R +F+ + R+V W+AMI G EA +F +M E
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 293 --RNPVSWTTMIDGYVRIAKLDEARRLLDQM 321
N V++T + +DEA L QM
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 153/326 (46%), Gaps = 25/326 (7%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLV 78
N + K G +E+A ++F M +K+ VT+ +M+ YA + AR++ MPQ+++V
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 79 SWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKARELFDL 133
+WN++I+ Y N K EA +F ++ + + + ++ + G LE R +
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 134 LPN---KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLA 190
+ + + +A++ Y+K G+ +++++ +++ +++ W++M+ G +G + A
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 191 SKFFEAMEERDV----VSWNLMLDGYVELDDLDSAWKFFQK-------IPEQNVVSWVTM 239
F M+E +V V++ + +D A F + +PE+ + +
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 240 LSGYARNGRMLEARRLFDQMPI-RNVVAWNAMIAA---YVQRGQIEEAARLFIEMPERNP 295
+ G R+G + +A + + MPI + W A++ A + E A +E+ RN
Sbjct: 511 VLG--RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 296 VSWTTMIDGYVRIAKLDEARRLLDQM 321
+ + + Y ++ K + L M
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHM 594
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 149/317 (47%), Gaps = 25/317 (7%)
Query: 45 NTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMF 104
N N+M+ Y K G + DA++LF+ M +++ V+W +M+ GY ++ + ARE+ + M
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 105 RPDLFSWALMITCYTRKGELEKARELFDLLP----NKEDTACWNAMVAGYAKIGNYNEAK 160
+ D+ +W +I+ Y + G+ +A +F L K + + ++ A++G E
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL-ELG 384
Query: 161 KLLDAMPSKNIVSWN-----SMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVEL 215
+ + + K+ + N +++ Y+K G++ + + F ++E+RDV W+ M+ G
Sbjct: 385 RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 216 DDLDSAWKFFQKIPEQNV----VSWVTMLSGYARNGRMLEARRLFDQMP-----IRNVVA 266
+ A F K+ E NV V++ + + G + EA LF QM +
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 267 WNAMIAAYVQRGQIEEAARLFIEMPERNPVS-WTTMIDGYVRIAKLDEAR----RLLDQM 321
+ ++ + G +E+A + MP S W ++ A L+ A RLL+
Sbjct: 505 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Query: 322 PYKNIAAQTAMISGYVQ 338
P +N A + + Y +
Sbjct: 565 P-RNDGAHVLLSNIYAK 580
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 328/622 (52%), Gaps = 42/622 (6%)
Query: 146 MVAGYAKIGNYNEAKKLLDAMPS---KNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV 202
+++ YA++G +A+ + + + ++ WNS+L +G A + + M +R +
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 203 VSWNLMLDGYVELDDLDSAWKFFQKIP--------------EQNVVSWVTMLSGYARNGR 248
DGY+ L + A ++ + ++N+ +L+ Y + GR
Sbjct: 155 TG-----DGYI-LPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGR 208
Query: 249 MLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLF--IEMPERNP--VSWTTMIDG 304
M +A LF +MP+RN ++WN MI + Q E A ++F ++ E P V+WT+++
Sbjct: 209 MGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 305 YVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDV------- 357
+ + K ++ + M A ++ + EA I +K+ + +
Sbjct: 269 HSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY 328
Query: 358 -VCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGK 416
N +I Y + G++ +A +LFRQ+ NK I +WN++I + ++D+A+ +F E+ +
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 417 -------RRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLA 469
+ N V+W ++I G D+L+ F M A+ T+ C LS CA L
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 470 ALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIA 529
AL LGR+IH I++ ++ V N+L+ MYAKCG + L+F+ D+ISWNS+I
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIK 508
Query: 530 GYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIE 589
GY ++G A +A+ +F+ M+ G PD + + VLSACSH GLV+ G ++F M++ + +E
Sbjct: 509 GYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLE 568
Query: 590 PLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEK 649
P EHYAC++DLL R G L EA E+VK M ++P + G LL +CRMH+N+ + +
Sbjct: 569 PQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQ 628
Query: 650 LSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLS 709
LS LEP++T Y LLSN+++ GRW+E VR + +K G SWIEVK + + F S
Sbjct: 629 LSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSS 688
Query: 710 GDPKQCRTAEICNTLKTLAAQI 731
G Q I L+ L + +
Sbjct: 689 GSIVQSEFETIYPVLEDLVSHM 710
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 183/403 (45%), Gaps = 56/403 (13%)
Query: 43 QKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDK 102
++N N +++ Y K GR+ DA LF +MP RN +SWN MI G+ + A ++F+
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 103 M----FRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYA------- 151
M F+PD +W +++C+++ G+ E + F L+ + A+ ++
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 152 -----KIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWN 206
K+ Y + +PS+ N+++ Y K G++ A F + + + SWN
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSR-----NALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 207 LMLDGYVELDDLDSAWKFFQKIPEQ--------NVVSWVTMLSGYARNGRMLEARRLFDQ 258
++ +V+ LD A F ++ E NVV+W +++ G GR ++ F Q
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 259 MPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLL 318
M V+A + I + + E+P N I G+V + E
Sbjct: 425 MQFSKVLANSVTICCILS---------ICAELPALN---LGREIHGHVIRTSMSE----- 467
Query: 319 DQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAIN 378
NI Q A+++ Y + + E + +F+ I D++ WN +IKGY G ++A++
Sbjct: 468 ------NILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALS 521
Query: 379 LFRQMVNK----DIVTWNTMIAGYAQIRQMDDAVKIFEEMGKR 417
+F +M++ D + +++ + ++ +IF M KR
Sbjct: 522 MFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 203/498 (40%), Gaps = 101/498 (20%)
Query: 51 SMISAYAKNGRVNDARKLFEQMP---QRNLVSWNSMIAGYLHNDKVKEARELFDKM---- 103
++IS YA+ G + DAR +FE + +L WNS++ + + + A EL+ M
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 104 FRPDLFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGNYNEAK 160
D + L++ G R + KE+ N ++ Y K G +A
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 161 KLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEER----DVVSWNLMLDGYVELD 216
L MP +N +SWN M+ G+++ + A K FE M+ D V+W +L + +
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 217 DLDSAWKFFQKIP---------------------------------------EQNVVSWV 237
+ K+F + E+ + S
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN 333
Query: 238 TMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNP-- 295
++ Y + G++ +A LF Q+ + + +WN++I ++V G+++EA LF E+ E N
Sbjct: 334 ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC 393
Query: 296 ------VSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQ--------NKR 341
V+WT++I G + D++ QM + + A + I + N
Sbjct: 394 NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLG 453
Query: 342 MDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQI 401
+ + + +++ N ++ YA+CG + E +F + +KD+++WN++I GY
Sbjct: 454 REIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYG-- 511
Query: 402 RQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACA 461
+ GF + AL +F M G D L
Sbjct: 512 -------------------------MHGFAEK-----ALSMFDRMISSGFHPDGIALVAV 541
Query: 462 LSACAHLAALQLGRQIHH 479
LSAC+H ++ GR+I +
Sbjct: 542 LSACSHAGLVEKGREIFY 559
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 164/390 (42%), Gaps = 72/390 (18%)
Query: 9 GNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKL 68
G Y+ ++N I GK G+V++A +F Q+ K ++NS+I+++ G++++A L
Sbjct: 323 GGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSL 382
Query: 69 FEQMPQ--------RNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCY-- 118
F ++ + N+V+W S+I G + ++ E F +M + + ++ I C
Sbjct: 383 FSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILS 442
Query: 119 --TRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVS 173
L RE+ + E+ NA+V YAK G +E + +A+ K+++S
Sbjct: 443 ICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLIS 502
Query: 174 WNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNV 233
WNS++ GY +G A F+ M +S DG
Sbjct: 503 WNSIIKGYGMHGFAEKALSMFDRM-----ISSGFHPDG---------------------- 535
Query: 234 VSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER 293
++ V +LS + G + + R +F M R F P++
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKR------------------------FGLEPQQ 571
Query: 294 NPVSWTTMIDGYVRIAKLDEARRLLDQMPYK-NIAAQTAMISGYVQNKRMDEANQIFDKI 352
+ ++D R+ L EA ++ MP + + A+++ +K +D A I ++
Sbjct: 572 E--HYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQL 629
Query: 353 GTHD---VVCWNVMIKGYAQCGRMDEAINL 379
+ + ++ Y+ GR +E+ N+
Sbjct: 630 SVLEPERTGSYMLLSNIYSAGGRWEESANV 659
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 268/445 (60%), Gaps = 5/445 (1%)
Query: 268 NAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPY--KN 325
N +I Y++ G + + ++F MP+R+ VS+ +MIDGYV+ + AR L D MP KN
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 326 IAAQTAMISGYVQNKR-MDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMV 384
+ + +MISGY Q +D A+++F + D++ WN MI GY + GR+++A LF M
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 279
Query: 385 NKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFV 444
+D+VTW TMI GYA++ + A +F++M R+ V++N++++G++QN++H++AL+IF
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTLFDQM-PHRDVVAYNSMMAGYVQNKYHMEALEIFS 338
Query: 445 LMTQEGKK-ADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKC 503
M +E D +TL L A A L L +H ++ + +G +LI MY+KC
Sbjct: 339 DMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKC 398
Query: 504 GRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVL 563
G IQ+A L+F+ + + WN++I G AI+G A + ++ + PD +TF+GVL
Sbjct: 399 GSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVL 458
Query: 564 SACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPN 623
+ACSH GLV GL FE M + IEP ++HY CM+D+LSR+G ++ A +++ M ++PN
Sbjct: 459 NACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPN 518
Query: 624 AGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVS 683
IW T L AC H+ + G + + L S Y LLSNM+A G W +V +VR
Sbjct: 519 DVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTM 578
Query: 684 MEGSGAQKQPGCSWIEVKNQIHTFL 708
M+ +K PGCSWIE+ ++H F
Sbjct: 579 MKERKIEKIPGCSWIELDGRVHEFF 603
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 239/475 (50%), Gaps = 61/475 (12%)
Query: 80 WNSMIAGYLHNDKVKEARELF----DKMFRPDLFSWALMITCYTRKGELEKARELFDLLP 135
WN++I + H ++A L + D FS +L++ +R G ++ ++ L
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL- 147
Query: 136 NKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFE 195
+ T W+ ++ N ++ Y K G + L+ + F+
Sbjct: 148 --KKTGLWS-------------------------DLFLQNCLIGLYLKCGCLGLSRQMFD 180
Query: 196 AMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQ--NVVSWVTMLSGYARNGRMLE-A 252
M +RD VS+N M+DGYV+ + SA + F +P + N++SW +M+SGYA+ ++ A
Sbjct: 181 RMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIA 240
Query: 253 RRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLD 312
+LF MP +++++WN+MI YV+ G+IE+A LF MP R+ V+W TMIDGY ++ +
Sbjct: 241 SKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVH 300
Query: 313 EARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKI--GTH---DVVCWNVMIKGY 367
A+ L DQMP++++ A +M++GYVQNK EA +IF + +H D +++
Sbjct: 301 HAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 360
Query: 368 AQCGRMDEAINLFRQMVNKDIVTWN----TMIAGYAQIRQMDDAVKIFEEMGKRRNTVSW 423
AQ GR+ +AI++ +V K +I Y++ + A+ +FE + + ++ W
Sbjct: 361 AQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI-ENKSIDHW 419
Query: 424 NALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAH-------LAALQLGRQ 476
NA+I G + A + + + + K D T L+AC+H L +L R+
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 479
Query: 477 IHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKD--ADPVDVISWNSLIA 529
H + + + ++ + ++ G I+ A+ L ++ +P DVI W + +
Sbjct: 480 KHKIEPRLQHY------GCMVDILSRSGSIELAKNLIEEMPVEPNDVI-WRTFLT 527
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 157/290 (54%), Gaps = 13/290 (4%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
S +F QN I K G + + ++F +M ++++V+YNSMI Y K G + AR+LF+ M
Sbjct: 154 SDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM 213
Query: 73 P--QRNLVSWNSMIAGYLH-NDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARE 129
P +NL+SWNSMI+GY +D V A +LF M DL SW MI Y + G +E A+
Sbjct: 214 PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKG 273
Query: 130 LFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHL 189
LFD++P + D W M+ GYAK+G + AK L D MP +++V++NSM++GY +N
Sbjct: 274 LFDVMP-RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHME 332
Query: 190 ASKFFEAMEER-----DVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVV----SWVTML 240
A + F ME+ D + ++L +L L A I E+ V ++
Sbjct: 333 ALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALI 392
Query: 241 SGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEM 290
Y++ G + A +F+ + +++ WNAMI G E A + +++
Sbjct: 393 DMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQI 442
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 145/267 (54%), Gaps = 13/267 (4%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFD--KMFRPD 107
N +I Y K G + +R++F++MP+R+ VS+NSMI GY+ + ARELFD M +
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 108 LFSWALMITCYTRKGE-LEKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAM 166
L SW MI+ Y + + ++ A +LF +P K D WN+M+ GY K G +AK L D M
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEK-DLISWNSMIDGYVKHGRIEDAKGLFDVM 278
Query: 167 PSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQ 226
P +++V+W +M+ GY K G +H A F+ M RDVV++N M+ GYV+ A + F
Sbjct: 279 PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFS 338
Query: 227 KIPEQNVV-----SWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWN----AMIAAYVQR 277
+ +++ + + V +L A+ GR+ +A + + + A+I Y +
Sbjct: 339 DMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKC 398
Query: 278 GQIEEAARLFIEMPERNPVSWTTMIDG 304
G I+ A +F + ++ W MI G
Sbjct: 399 GSIQHAMLVFEGIENKSIDHWNAMIGG 425
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 24/296 (8%)
Query: 28 SGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGY 87
S V+ A K+F+ M +K+ +++NSMI Y K+GR+ DA+ LF+ MP+R++V+W +MI GY
Sbjct: 234 SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGY 293
Query: 88 LHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFD-------LLPNKEDT 140
V A+ LFD+M D+ ++ M+ Y + +A E+F LLP D
Sbjct: 294 AKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLP---DD 350
Query: 141 ACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWN----SMLSGYTKNGEMHLASKFFEA 196
++ A++G ++A + + K +++ Y+K G + A FE
Sbjct: 351 TTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEG 410
Query: 197 MEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNV----VSWVTMLSGYARNGRMLEA 252
+E + + WN M+ G +SA+ +I ++ +++V +L+ + +G + E
Sbjct: 411 IENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 253 RRLFDQMPIRNVVA-----WNAMIAAYVQRGQIEEAARLFIEMP-ERNPVSWTTMI 302
F+ M ++ + + M+ + G IE A L EMP E N V W T +
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFL 526
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 9/218 (4%)
Query: 415 GKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLG 474
G+ + WNA+I + AL + LM + G D +L+ L AC+ L ++ G
Sbjct: 81 GEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGG 140
Query: 475 RQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAIN 534
QIH K+G +DLF+ N LI +Y KCG + + +F D +S+NS+I GY
Sbjct: 141 MQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKC 200
Query: 535 GNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVG-LVDGGLKLFECMTEVYAIEPLVE 593
G A +LF+ M ME + +++ ++S + VD KLF M E I
Sbjct: 201 GLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS---- 254
Query: 594 HYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLL 631
+ MID + GR+++A + M + + W T++
Sbjct: 255 -WNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 290
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 456 STLACALSACAH-LAALQLG---RQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAEL 511
ST+ C++S+ H L + + QIH IK+G + + + ++ +A R A+
Sbjct: 6 STMECSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADF 65
Query: 512 L-----------FKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFI 560
F + D WN++I ++ + +A+ L M+ GV+ D +
Sbjct: 66 ARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLS 125
Query: 561 GVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGM 618
VL ACS +G V GG+++ + + L C+I L + G L + +M M
Sbjct: 126 LVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQ-NCLIGLYLKCGCLGLSRQMFDRM 182
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 332 bits (850), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 194/615 (31%), Positives = 310/615 (50%), Gaps = 81/615 (13%)
Query: 196 AMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRL 255
A+ + +N ++ Y + A + F +IP+ N+ SW +L Y++ G + E
Sbjct: 35 ALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 256 FDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEM-----PERNPVSWTTMI-----DGY 305
F+++P R+ V WN +I Y G + A + + M V+ TM+ +G+
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 306 VRIAK------------------------------LDEARRLLDQMPYKNIAAQTAMISG 335
V + K + +A+++ + +N +++ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 336 YVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM------------ 383
+ +++A Q+F + D V W MIKG AQ G EAI FR+M
Sbjct: 215 LLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 384 ---------------------------VNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGK 416
I + +I Y + + + A +F+ M K
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM-K 332
Query: 417 RRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQ 476
++N VSW A++ G+ Q +A+KIF+ M + G DH TL A+SACA++++L+ G Q
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 477 IHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGN 536
H AI SG ++ + V NSL+T+Y KCG I ++ LF + + D +SW ++++ YA G
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 537 ATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYA 596
A E I+LF++MV G+ PD VT GV+SACS GLV+ G + F+ MT Y I P + HY+
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 597 CMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQ 656
CMIDL SR+GRL+EA + GM P+A W TLL ACR N+++G+ A E L EL+P
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH 572
Query: 657 KTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCR 716
+ Y LLS+++A G+WD V ++R M +K+PG SWI+ K ++H+F + D
Sbjct: 573 HPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPY 632
Query: 717 TAEICNTLKTLAAQI 731
+I L+ L +I
Sbjct: 633 LDQIYAKLEELNNKI 647
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/526 (23%), Positives = 241/526 (45%), Gaps = 28/526 (5%)
Query: 37 IFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEA 96
I + T YN+++ AYA AR++F+++PQ NL SWN+++ Y + E
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 97 RELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNY 156
F+K+ D +W ++I Y+ G + A + ++ + + K+ +
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 157 NEAKKLLDAMPSKNI--------VSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLM 208
N L + + I + + +L Y G + A K F +++R+ V +N +
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 209 LDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNV---- 264
+ G + ++ A + F+ + E++ VSW M+ G A+NG EA F +M ++ +
Sbjct: 212 MGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 265 VAWNAMIAAYVQRGQIEEAARLFIEMPERN----PVSWTTMIDGYVRIAKLDEARRLLDQ 320
+ +++ A G I E ++ + N + +ID Y + L A+ + D+
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 321 MPYKNIAAQTAMISGYVQNKRMDEANQIF---DKIGTH-DVVCWNVMIKGYAQCGRMDEA 376
M KN+ + TAM+ GY Q R +EA +IF + G D I A ++E
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 377 INLFRQMVNKDIVTW----NTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQ 432
+ + ++ + N+++ Y + +DD+ ++F EM R+ VSW A++S + Q
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQ 449
Query: 433 NEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKS-GYVNDLF 491
++ +++F M Q G K D TL +SAC+ ++ G++ L G V +
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 492 VGNSLITMYAKCGRIQNAELLFKDAD-PVDVISWNSLIAGYAINGN 536
+ +I ++++ GR++ A P D I W +L++ GN
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 185/404 (45%), Gaps = 47/404 (11%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
SY+ + + G + +A K+F + +NTV YNS++ G + DA +LF M
Sbjct: 172 SYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM 231
Query: 73 PQRNLVSWNSMIAGYLHNDKVKEARELFDKM----FRPDLFSWALMITCYTRKGELEKAR 128
+++ VSW +MI G N KEA E F +M + D + + ++ G + + +
Sbjct: 232 -EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGK 290
Query: 129 ELFDLL--PNKED-TACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNG 185
++ + N +D +A++ Y K + AK + D M KN+VSW +M+ GY + G
Sbjct: 291 QIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG 350
Query: 186 EMHLASKFFEAME----ERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVT--- 238
A K F M+ + D + + + L+ +F K ++ +VT
Sbjct: 351 RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSN 410
Query: 239 -MLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER---- 293
+++ Y + G + ++ RLF++M +R+ V+W AM++AY Q G+ E +LF +M +
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP 470
Query: 294 NPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIG 353
+ V+ T +I R +++ +R K M I IG
Sbjct: 471 DGVTLTGVISACSRAGLVEKGQRYF---------------------KLMTSEYGIVPSIG 509
Query: 354 THDVVCWNVMIKGYAQCGRMDEAINLFRQM-VNKDIVTWNTMIA 396
++ MI +++ GR++EA+ M D + W T+++
Sbjct: 510 H-----YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 225/494 (45%), Gaps = 38/494 (7%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQ 74
+F+ N + K+G + E F ++ ++ VT+N +I Y+ +G V A K + M +
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 75 ---RNL--VSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWAL----MITCYTRKGELE 125
NL V+ +M+ N V +++ ++ + S+ L ++ Y G +
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 126 KARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNG 185
A+++F L ++ +T +N+++ G G +A +L M K+ VSW +M+ G +NG
Sbjct: 192 DAKKVFYGLDDR-NTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNG 249
Query: 186 EMHLASKFFEAME----ERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWV---- 237
A + F M+ + D + +L L ++ + I N +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 238 TMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER--NP 295
++ Y + + A+ +FD+M +NVV+W AM+ Y Q G+ EEA ++F++M +P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 296 VSWT--TMIDGYVRIAKLDEARRLLDQMPYKN----IAAQTAMISGYVQNKRMDEANQIF 349
+T I ++ L+E + + + ++++ Y + +D++ ++F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 350 DKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNK----DIVTWNTMIAGYAQIRQMD 405
+++ D V W M+ YAQ GR E I LF +MV D VT +I+ ++ ++
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 406 DAVKIFEEMGKRRNTVS----WNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACA 461
+ F+ M V ++ +I F ++ +A++ M +TL
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL--- 546
Query: 462 LSACAHLAALQLGR 475
LSAC + L++G+
Sbjct: 547 LSACRNKGNLEIGK 560
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 165/411 (40%), Gaps = 107/411 (26%)
Query: 288 IEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQ 347
I + RN + MI G ++ +PY ++ Y K A +
Sbjct: 14 IGLGARNQSRYVKMIHG-----------NIIRALPYPETFLYNNIVHAYALMKSSTYARR 62
Query: 348 IFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDA 407
+FD+I ++ WN ++ Y++ G + E + F ++ ++D VTWN +I GY+ + A
Sbjct: 63 VFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 122
Query: 408 VKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAH 467
VK ++N ++ F N + + + L + G
Sbjct: 123 VK------------AYNTMMRDFSANLTRVTLMTMLKLSSSNGH---------------- 154
Query: 468 LAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAK------------------------- 502
+ LG+QIH IK G+ + L VG+ L+ MYA
Sbjct: 155 ---VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 503 ------CGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDP 556
CG I++A LF+ + D +SW ++I G A NG A EAI+ F EM ++G+ D
Sbjct: 212 MGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 557 VTFIGVLSACSHVGLVDGGLKLFECMT------EVYAIEPLVE--------HYA------ 596
F VL AC +G ++ G ++ C+ +Y L++ HYA
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 597 ----------CMIDLLSRAGRLDEAFEMVKGMK---IKPNAGIWGTLLGAC 634
M+ + GR +EA ++ M+ I P+ G + AC
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 112/263 (42%), Gaps = 51/263 (19%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQKN------------------------------------ 45
+ G++GR EEA+KIF M +
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
Query: 46 ---TVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDK 102
NS+++ Y K G ++D+ +LF +M R+ VSW +M++ Y + E +LFDK
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDK 462
Query: 103 M----FRPDLFSWALMITCYTRKGELEKARELFDLLPNK----EDTACWNAMVAGYAKIG 154
M +PD + +I+ +R G +EK + F L+ ++ ++ M+ +++ G
Sbjct: 463 MVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Query: 155 NYNEAKKLLDAMP-SKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERD---VVSWNLMLD 210
EA + ++ MP + + W ++LS G + + E++ E D + L+
Sbjct: 523 RLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSS 582
Query: 211 GYVELDDLDSAWKFFQKIPEQNV 233
Y DS + + + E+NV
Sbjct: 583 IYASKGKWDSVAQLRRGMREKNV 605
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 25/242 (10%)
Query: 14 YVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMP 73
YV N +T GK G ++++ ++F++M+ ++ V++ +M+SAYA+ GR + +LF++M
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 74 QRNL----VSWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGEL 124
Q L V+ +I+ V++ + F M P + ++ MI ++R G L
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 125 EKARELFDLLPNKEDTACWNAMVAGYAKIGNYN----EAKKLLDAMPSKNIVSWNSMLSG 180
E+A + +P D W +++ GN A+ L++ P + + + S
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP-HHPAGYTLLSSI 583
Query: 181 YTKNGEMHLASKFFEAMEERDV--------VSWNLMLDGYVELDDLDSAW--KFFQKIPE 230
Y G+ ++ M E++V + W L + DD S + + + K+ E
Sbjct: 584 YASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSF-SADDESSPYLDQIYAKLEE 642
Query: 231 QN 232
N
Sbjct: 643 LN 644
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 312/580 (53%), Gaps = 25/580 (4%)
Query: 169 KNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKI 228
K V W S L G+ A K F + E DVV WN M+ G+ ++D + + +
Sbjct: 71 KLFVFWCSRLGGHVS-----YAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM 125
Query: 229 PEQNVV----SWVTMLSGYARNGRMLEARRLFDQMPIR-----NVVAWNAMIAAYVQRGQ 279
++ V ++ +L+G R+G L + ++ N+ NA++ Y G
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL 185
Query: 280 IEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAM-----IS 334
++ A +F + + SW MI GY R+ + +E+ LL +M +N+ + T++ +S
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME-RNLVSPTSVTLLLVLS 244
Query: 335 GYVQNKRMDEANQIFDKIGT----HDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVT 390
+ K D ++ + + + N ++ YA CG MD A+ +FR M +D+++
Sbjct: 245 ACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS 304
Query: 391 WNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEG 450
W +++ GY + + A F++M R+ +SW +I G+L+ ++L+IF M G
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQM-PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG 363
Query: 451 KKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAE 510
D T+ L+ACAHL +L++G I K+ ND+ VGN+LI MY KCG + A+
Sbjct: 364 MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 511 LLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVG 570
+F D D D +W +++ G A NG EAIK+F +M + PD +T++GVLSAC+H G
Sbjct: 424 KVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSG 483
Query: 571 LVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTL 630
+VD K F M + IEP + HY CM+D+L RAG + EA+E+++ M + PN+ +WG L
Sbjct: 484 MVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Query: 631 LGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQ 690
LGA R+H + + +A +K+ ELEP + YALL N++A RW ++ +VR + +
Sbjct: 544 LGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIK 603
Query: 691 KQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQ 730
K PG S IEV H F++GD ++ EI L+ LA +
Sbjct: 604 KTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQE 643
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 187/416 (44%), Gaps = 63/416 (15%)
Query: 60 GRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFR----PDLFSWALMI 115
G V+ A KLF ++P+ ++V WN+MI G+ D E L+ M + PD ++ ++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 116 T----------------CYTRK--------------------GELEKARELFDLLPNKED 139
C+ K G ++ AR +FD KED
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD-RRCKED 200
Query: 140 TACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNS-----MLSGYTKNGEMHLASKFF 194
WN M++GY ++ Y E+ +LL M +N+VS S +LS +K + L +
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 195 EAME----ERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRML 250
E + E + N +++ Y ++D A + F+ + ++V+SW +++ GY G +
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 251 EARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPV-SWTTMIDGYVRIA 309
AR FDQMP+R+ ++W MI Y++ G E+ +F EM + TM+ A
Sbjct: 320 LARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 310 KLDE------ARRLLDQMPYKN-IAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNV 362
L + +D+ KN + A+I Y + ++A ++F + D W
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 363 MIKGYAQCGRMDEAINLFRQM----VNKDIVTWNTMIAGYAQIRQMDDAVKIFEEM 414
M+ G A G+ EAI +F QM + D +T+ +++ +D A K F +M
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 188/378 (49%), Gaps = 25/378 (6%)
Query: 45 NTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMF 104
N N+++ Y+ G ++ AR +F++ + ++ SWN MI+GY + +E+ EL +M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 105 R----PDLFSWALMITCYTR---KGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYN 157
R P + L+++ ++ K ++ E + NA+V YA G +
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 288
Query: 158 EAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDD 217
A ++ +M +++++SW S++ GY + G + LA +F+ M RD +SW +M+DGY+
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 218 LDSAWKFFQKIPEQNVV----SWVTMLSGYARNGRMLEA---RRLFDQMPIRN-VVAWNA 269
+ + + F+++ ++ + V++L+ A G + + D+ I+N VV NA
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA 408
Query: 270 MIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQ 329
+I Y + G E+A ++F +M +R+ +WT M+ G + EA ++ QM +I
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPD 468
Query: 330 T----AMISGYVQNKRMDEANQIFDKIGTH-----DVVCWNVMIKGYAQCGRMDEAINLF 380
++S + +D+A + F K+ + +V + M+ + G + EA +
Sbjct: 469 DITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEIL 528
Query: 381 RQM-VNKDIVTWNTMIAG 397
R+M +N + + W ++
Sbjct: 529 RKMPMNPNSIVWGALLGA 546
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 148/322 (45%), Gaps = 23/322 (7%)
Query: 18 QNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNL 77
+N + G ++ A++IF M ++ +++ S++ Y + G + AR F+QMP R+
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 78 VSWNSMIAGYLHNDKVKEARELFDKM----FRPDLFSWALMITCYTRKGELEKA---REL 130
+SW MI GYL E+ E+F +M PD F+ ++T G LE +
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY 393
Query: 131 FDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLA 190
D K D NA++ Y K G +A+K+ M ++ +W +M+ G NG+ A
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 191 SKFFEAMEERDVVSWNLMLDGYVELDD----LDSAWKFFQKIP-----EQNVVSWVTMLS 241
K F M++ + ++ G + + +D A KFF K+ E ++V + M+
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 242 GYARNGRMLEARRLFDQMPIR-NVVAWNAMIAA---YVQRGQIEEAARLFIEMPERNPVS 297
R G + EA + +MP+ N + W A++ A + E AA+ +E+ N
Sbjct: 514 MLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV 573
Query: 298 WTTMIDGYV---RIAKLDEARR 316
+ + + Y R L E RR
Sbjct: 574 YALLCNIYAGCKRWKDLREVRR 595
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 16 FNQNKKITQLGKSGRVEEAIKIFSQMS----QKNTVTYNSMISAYAKNGRVNDARKLFEQ 71
F + L +G+ +EAIK+F QM Q + +TY ++SA +G V+ ARK F +
Sbjct: 435 FTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAK 494
Query: 72 MPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELF 131
M D P L + M+ R G +++A E+
Sbjct: 495 MRS--------------------------DHRIEPSLVHYGCMVDMLGRAGLVKEAYEIL 528
Query: 132 DLLPNKEDTACWNAMVAGYAKIGNYNE-----AKKLLDAMPSKNIV 172
+P ++ W A++ G +++ N AKK+L+ P V
Sbjct: 529 RKMPMNPNSIVWGALL-GASRLHNDEPMAELAAKKILELEPDNGAV 573
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 329 bits (844), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 208/682 (30%), Positives = 347/682 (50%), Gaps = 78/682 (11%)
Query: 120 RKGELEKAREL-FDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAM---PSKNIVSWN 175
R G+L AR + FD+ P D+ +N++++ Y+K G+ +A+ + + M +++VSW+
Sbjct: 79 RLGKLVHARLIEFDIEP---DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWS 135
Query: 176 SMLSGYTKNG-EMHLASKFFEAMEE-------------RDVVSWNLMLDGYVELDDLDSA 221
+M++ Y NG E+ F E +E R + + + G V L L
Sbjct: 136 AMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKT 195
Query: 222 WKFFQKIPEQNVVSWVTMLSGYARNGRMLE-ARRLFDQMPIRNVVAWNAMIAAYVQRGQI 280
F E +V +++ + + E A ++FD+M NVV W MI +Q G
Sbjct: 196 GHF-----ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 281 EEAARLFIEMP----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIA--AQTAMIS 334
EA R F++M E + + +++ + L ++L + + +++
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVD 310
Query: 335 GYVQ---NKRMDEANQIFDKIGTHDVVCWNVMIKGYAQ-CGRMDEAINLFRQMVNKDIV- 389
Y + + +D+ ++FD++ H V+ W +I GY + C EAINLF +M+ + V
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370
Query: 390 ---------------------------------------TWNTMIAGYAQIRQMDDAVKI 410
N++I+ + + +M+DA +
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRA 430
Query: 411 FEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAA 470
FE + ++ N VS+N + G +N A K+ +T+ T A LS A++ +
Sbjct: 431 FESLSEK-NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGS 489
Query: 471 LQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAG 530
++ G QIH +K G + V N+LI+MY+KCG I A +F + +VISW S+I G
Sbjct: 490 IRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITG 549
Query: 531 YAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEP 590
+A +G A ++ F +M+ EGV P+ VT++ +LSACSHVGLV G + F M E + I+P
Sbjct: 550 FAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609
Query: 591 LVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKL 650
+EHYACM+DLL RAG L +AFE + M + + +W T LGACR+H N +LG++A K+
Sbjct: 610 KMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKI 669
Query: 651 SELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFLSG 710
EL+P + + Y LSN++A AG+W+E ++R M+ K+ GCSWIEV ++IH F G
Sbjct: 670 LELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVG 729
Query: 711 DPKQCRTAEICNTLKTLAAQIR 732
D +I + L L +I+
Sbjct: 730 DTAHPNAHQIYDELDRLITEIK 751
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/591 (21%), Positives = 263/591 (44%), Gaps = 76/591 (12%)
Query: 43 QKNTVTYNSMISAYAKNGRVNDARKLFEQM---PQRNLVSWNSMIAGYLHN----DKVKE 95
+ ++V YNS+IS Y+K+G A +FE M +R++VSW++M+A Y +N D +K
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 96 ARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPN----KEDTACWNAMVAGYA 151
E + P+ + + +I + + R L + D +++ +
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 152 KIGN-YNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----ERDVVSWN 206
K N + A K+ D M N+V+W M++ + G A +FF M E D + +
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 207 LMLDGYVELDDLD-----SAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPI 261
+ EL++L +W + + S V M + + +G + + R++FD+M
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 262 RNVVAWNAMIAAYVQRGQI-EEAARLFIEM-----PERNPVSWTTMIDGYVRIAKLDEAR 315
+V++W A+I Y++ + EA LF EM E N ++++ ++ +
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 316 RLLDQMPYKNIAAQT----AMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCG 371
++L Q + +A+ + ++IS +V++ RM++A + F+ + ++V +N + G +
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 372 RMDEAINLFRQMVNKDI---------------------------------------VTWN 392
++A L ++ +++ N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 393 TMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKK 452
+I+ Y++ +D A ++F M + RN +SW ++I+GF ++ F + L+ F M +EG K
Sbjct: 514 ALISMYSKCGSIDTASRVFNFM-ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 453 ADHSTLACALSACAHLAALQLG-RQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAEL 511
+ T LSAC+H+ + G R + + + ++ + + G + +A
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA-F 631
Query: 512 LFKDADP--VDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFI 560
F + P DV+ W + + ++ N TE KL ++E +P +I
Sbjct: 632 EFINTMPFQADVLVWRTFLGACRVHSN-TELGKLAARKILELDPNEPAAYI 681
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 163/345 (47%), Gaps = 31/345 (8%)
Query: 38 FSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEAR 97
F + N+ NS+IS + K+ R+ DA++ FE + ++NLVS+N+ + G N ++A
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 98 ELFDKMFRPDL----FSWALMITCYTRKGELEKARELFDLLPNKEDTAC----WNAMVAG 149
+L ++ +L F++A +++ G + K ++ + K +C NA+++
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVCNALISM 518
Query: 150 YAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV----VSW 205
Y+K G+ + A ++ + M ++N++SW SM++G+ K+G + F M E V V++
Sbjct: 519 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578
Query: 206 NLMLDGYVELDDLDSAWKFFQKIPEQNVVS-----WVTMLSGYARNGRMLEARRLFDQMP 260
+L + + W+ F + E + + + M+ R G + +A + MP
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 261 IR-NVVAWNAMIAAYVQRGQIE---EAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARR 316
+ +V+ W + A E AAR +E+ P ++ + + Y K +E+
Sbjct: 639 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 698
Query: 317 LLDQMPYKNIAAQTA---------MISGYVQNKRMDEANQIFDKI 352
+ +M +N+ + + YV + A+QI+D++
Sbjct: 699 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 439 ALKIFVLMTQEG-KKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLI 497
A+ LM ++G + D T + L +C +LG+ +H I+ D + NSLI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 498 TMYAKCGRIQNAELLFKDADPV---DVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAP 554
++Y+K G AE +F+ DV+SW++++A Y NG +AIK+F E + G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 555 DPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRA-GRLDEAFE 613
+ + V+ ACS+ V G + + E V +ID+ + + A++
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 614 MVKGMKIKPNAGIWGTLLGAC 634
+ M + N W ++ C
Sbjct: 225 VFDKMS-ELNVVTWTLMITRC 244
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 328 bits (842), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 216/753 (28%), Positives = 366/753 (48%), Gaps = 80/753 (10%)
Query: 28 SGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGY 87
SG+V + M + +T N ++ Y + G + ARK+F++M R++ SWN+ +
Sbjct: 24 SGKVIHGFIVRMGM-KSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 88 LHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFD------LLPNKED-- 139
+ EA E+FD M D+ SW MI+ RKG EKA ++ LP++
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 140 ---TACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEM-HLASKFFE 195
+AC + + + K LD KNI N++LS Y K G + + FE
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLD----KNIFVGNALLSMYAKCGFIVDYGVRVFE 198
Query: 196 AMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQ----------NVVSWV-------- 237
++ + + VS+ ++ G + + A + F+ + E+ N++S
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS 258
Query: 238 ------------------------------TMLSGYARNGRMLEARRLFDQMPIRNVVAW 267
++L YA+N M A +F +MP NVV+W
Sbjct: 259 LSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 268 NAMIAAYVQRGQIEEAARLFIEMPER----NPVSWTTMIDGYVRIAKLDEARRLLDQMPY 323
N MI + Q + +++ M + N V+ +++ R ++ RR+ +P
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ 378
Query: 324 KNIAAQTAMISGYVQNKRMDEANQIFDKIGTH----DVVCWNVMIKGYAQC-----GRMD 374
+++A AM+SGY + +EA F ++ D +V++ A+ G+
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Query: 375 EAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNE 434
+ + R ++K+ + +IA Y++ +M+ + IF++ + WN++ISGF N
Sbjct: 439 HGV-VIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNM 497
Query: 435 FHLDALKIFVLMTQEGKKA-DHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVG 493
AL +F M Q + ++ A LS+C+ L +L GRQ H L +KSGYV+D FV
Sbjct: 498 LDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE 557
Query: 494 NSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVA 553
+L MY KCG I +A F + + WN +I GY NG EA+ L+ +M+ G
Sbjct: 558 TALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEK 617
Query: 554 PDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFE 613
PD +TF+ VL+ACSH GLV+ GL++ M ++ IEP ++HY C++D L RAGRL++A +
Sbjct: 618 PDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEK 677
Query: 614 MVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGR 673
+ + K ++ +W LL +CR+H ++ L R EKL L+PQ ++ Y LLSN ++ +
Sbjct: 678 LAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQ 737
Query: 674 WDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHT 706
WD+ ++ M + K PG SW N + +
Sbjct: 738 WDDSAALQGLMNKNRVHKTPGQSWTTYGNDLDS 770
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 334/650 (51%), Gaps = 63/650 (9%)
Query: 144 NAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----E 199
N ++ Y K G A L D MP ++ VSWN+M+SGYT G++ A F M+ +
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 200 RDVVSWNLMLDGYVELDDLDSAWKFFQKIP----EQNVVSWVTMLSGYARNGRMLEARRL 255
D S++ +L G + D + + E NV +++ YA+ R+ +A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 256 FDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVS--------WTTMIDG--Y 305
F ++ N V+WNA+IA +VQ I+ A L M + V+ T++D +
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 306 VRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIG-THDVVCWNVMI 364
+ K A+ L + ++ I AMIS Y + +A ++FD +G + D++ WN MI
Sbjct: 219 CNLLKQVHAKVLKLGLQHE-ITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 365 KGYAQCGRMDEAINLFRQM----VNKDIVTW----------------------------- 391
G+++ + A LF QM V DI T+
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 392 ------NTMIAGYAQIRQ--MDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIF 443
N +I+ Y Q M+DA+ +FE + K ++ +SWN++I+GF Q DA+K F
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESL-KSKDLISWNSIITGFAQKGLSEDAVKFF 396
Query: 444 VLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKC 503
+ K D + L +C+ LA LQLG+QIH LA KSG+V++ FV +SLI MY+KC
Sbjct: 397 SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKC 456
Query: 504 GRIQNAELLFKD-ADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGV 562
G I++A F+ + ++WN++I GYA +G ++ LF +M + V D VTF +
Sbjct: 457 GIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAI 516
Query: 563 LSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKP 622
L+ACSH GL+ GL+L M VY I+P +EHYA +DLL RAG +++A E+++ M + P
Sbjct: 517 LTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNP 576
Query: 623 NAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRV 682
+ + T LG CR I++ L E+EP+ Y LS+M+++ +W+E V+
Sbjct: 577 DPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKK 636
Query: 683 SMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
M+ G +K PG SWIE++NQ+ F + D +I +K L +++
Sbjct: 637 MMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/589 (23%), Positives = 266/589 (45%), Gaps = 102/589 (17%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRP--- 106
N ++ +Y K G + A LF++MP+R+ VSWN+MI+GY K+++A LF M R
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 107 -DLFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGNYNEAKKL 162
D +S++ ++ + ++ L+ + + +++V YAK +A +
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 163 LDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWN--------LMLDGYVE 214
+ N VSWN++++G+ + ++ A ME + V+ + +LD +
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 215 LDDLDSAWKFFQKIPEQNVVSWV-TMLSGYARNGRMLEARRLFDQM-PIRNVVAWNAMIA 272
+ L K+ Q+ ++ M+S YA G + +A+R+FD + +++++WN+MIA
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 273 AYVQRGQIEEAARLFIEMP----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNI-- 326
+ + E A LFI+M E + ++T ++ + L + K +
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ 338
Query: 327 --AAQTAMISGYVQ--NKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQ 382
+A A+IS Y+Q M++A +F+ + + D++ WN +I G+AQ G ++A+ F
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSY 398
Query: 383 MVNKDI---------------------------------------VTWNTMIAGYAQIRQ 403
+ + +I +++I Y++
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 404 MDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALS 463
++ A K F+++ + +TV+WNA+I G+ Q+ +L +F M + K DH T L+
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 518
Query: 464 ACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVIS 523
AC+H +Q G ++ +L + +Y R+++ A VD++
Sbjct: 519 ACSHTGLIQEGLELLNL---------------MEPVYKIQPRMEHY------AAAVDLLG 557
Query: 524 WNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPV---TFIGVLSACSHV 569
L+ +A +L E M + PDP+ TF+GV AC +
Sbjct: 558 RAGLV---------NKAKELIESMPLN---PDPMVLKTFLGVCRACGEI 594
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 153/316 (48%), Gaps = 40/316 (12%)
Query: 261 IRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQ 320
I ++ N ++ +Y++ G + A LF EMP+R+ VSW TMI GY KL++A L
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 321 MPYKNIAAQ----TAMISGYVQNKRMDEANQIFDKI--GTHD--VVCWNVMIKGYAQCGR 372
M + ++ G KR D Q+ + G ++ V + ++ YA+C R
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 373 MDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQ 432
+++A F+++ + V+WN +IAG+ Q+R + T W + G ++
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDI--------------KTAFW---LLGLME 194
Query: 433 NEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFV 492
+K V M D T A L+ L +Q+H +K G +++ +
Sbjct: 195 -------MKAAVTM-------DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITI 240
Query: 493 GNSLITMYAKCGRIQNAELLFKD-ADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEG 551
N++I+ YA CG + +A+ +F D+ISWNS+IAG++ + A +LF +M
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 552 VAPDPVTFIGVLSACS 567
V D T+ G+LSACS
Sbjct: 301 VETDIYTYTGLLSACS 316
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 196/412 (47%), Gaps = 52/412 (12%)
Query: 45 NTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM- 103
N +S++ YAK RV DA + F+++ + N VSWN++IAG++ +K A L M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 104 ----FRPDLFSWALMIT-------CYTRKGELEKARELFDLLPNKEDTACWNAMVAGYAK 152
D ++A ++T C K + ++ L E T C NAM++ YA
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLK---QVHAKVLKLGLQHEITIC-NAMISSYAD 250
Query: 153 IGNYNEAKKLLDAM-PSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----ERDVVSWNL 207
G+ ++AK++ D + SK+++SWNSM++G++K+ A + F M+ E D+ ++
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 208 MLDGYV----ELDDLDSAWKFFQKIPEQNVVSWVTMLSGYAR--NGRMLEARRLFDQMPI 261
+L ++ +K EQ + ++S Y + G M +A LF+ +
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS 370
Query: 262 RNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQM 321
+++++WN++I + Q+G E+A + F + S +D Y A L L
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLR-----SSEIKVDDYAFSALLRSCSDLATLQ 425
Query: 322 PYKNIAAQTAMISGYVQNKR--------------MDEANQIFDKIGT-HDVVCWNVMIKG 366
+ I A A SG+V N+ ++ A + F +I + H V WN MI G
Sbjct: 426 LGQQIHA-LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILG 484
Query: 367 YAQCGRMDEAINLFRQMVNKDI----VTWNTMIAGYAQIRQMDDAVKIFEEM 414
YAQ G +++LF QM N+++ VT+ ++ + + + +++ M
Sbjct: 485 YAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLM 536
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 478 HHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNA 537
H AIK G ++D++V N ++ Y K G + A +LF + D +SWN++I+GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 538 TEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKL--------FECMTEVYAIE 589
+A LF M G D +F +L + V D G ++ +EC VY
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC--NVYVGS 140
Query: 590 PLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIK 641
LV+ YA + R+++AFE K + +PN+ W L+ ++IK
Sbjct: 141 SLVDMYA-------KCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIK 184
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 140/315 (44%), Gaps = 42/315 (13%)
Query: 28 SGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGY 87
+G +E+A+ +F + K+ +++NS+I+ +A+ G DA K F + + + +
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 88 LHNDKVKEARELFDKM--------FRPDLFSWALMITCYTRKGELEKARELFDLLPNKED 139
L + +L ++ F + F + +I Y++ G +E AR+ F + +K
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 140 TACWNAMVAGYAKIGNYNEAKKLLDAMPSKNI----VSWNSMLSGYTKNGEMHLASKFFE 195
T WNAM+ GYA+ G + L M ++N+ V++ ++L+ + G
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTG---------- 524
Query: 196 AMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRL 255
L+ +G L+ ++ +K ++ ++ + V +L R G + +A+ L
Sbjct: 525 -----------LIQEGLELLNLMEPVYKIQPRM--EHYAAAVDLL---GRAGLVNKAKEL 568
Query: 256 FDQMPIR-NVVAWNAMIAAYVQRGQIEEAARL---FIEMPERNPVSWTTMIDGYVRIAKL 311
+ MP+ + + + G+IE A ++ +E+ + ++ ++ Y + K
Sbjct: 569 IESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKW 628
Query: 312 DEARRLLDQMPYKNI 326
+E + M + +
Sbjct: 629 EEKASVKKMMKERGV 643
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 205/692 (29%), Positives = 336/692 (48%), Gaps = 104/692 (15%)
Query: 146 MVAGYAKIGNYNEAKKLLDAMPSKN--IVSWNSMLSGYTKNGEMHLASKFFEAMEE---- 199
+++ Y +G + A LL P + + WNS++ Y NG + F M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 200 RDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWV----TMLSGYARNGRMLEARRL 255
D ++ + E+ + +S V +++ Y+R + +AR++
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 256 FDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEM-------PE---------------- 292
FD+M + +VV+WN++I +Y + G+ + A +F M P+
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 293 -----------------RNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISG 335
+N ++D Y + +DEA + M K++ + AM++G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 336 YVQNKRMDEANQIFDKIGTH----DVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDI--- 388
Y Q R ++A ++F+K+ DVV W+ I GYAQ G EA+ + RQM++ I
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 389 -VTWNTMIAG------------------------------------------YAQIRQMD 405
VT ++++G YA+ +++D
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 406 DAVKIFEEMG-KRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEG--KKADHSTLACAL 462
A +F+ + K R+ V+W +I G+ Q+ AL++ M +E + + T++CAL
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 463 SACAHLAALQLGRQIHHLAIKSGY-VNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDV 521
ACA LAAL++G+QIH A+++ LFV N LI MYAKCG I +A L+F + +
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 522 ISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFEC 581
++W SL+ GY ++G EA+ +F+EM G D VT + VL ACSH G++D G++ F
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 582 MTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIK 641
M V+ + P EHYAC++DLL RAGRL+ A +++ M ++P +W L CR+H ++
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 642 LGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVK 701
LG A EK++EL Y LLSN++A AGRW +V ++R M G +K+PGCSW+E
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGI 724
Query: 702 NQIHTFLSGDPKQCRTAEICNTLKTLAAQIRN 733
TF GD EI L +I++
Sbjct: 725 KGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKD 756
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 166/666 (24%), Positives = 290/666 (43%), Gaps = 120/666 (18%)
Query: 14 YVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMP 73
+VF +I+ + + G A+ + + N N++++ Y++ ++DARK+F++M
Sbjct: 132 FVFKACGEISSV-RCGESAHALSLVTGFIS-NVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 74 QRNLVSWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKAR 128
++VSWNS+I Y K K A E+F +M RPD + ++ G +
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 129 ELFDLLPNKE---DTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNG 185
+L E + N +V YAK G +EA + M K++VSWN+M++GY++ G
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 186 EMHLASKFFEAMEER----DVVSWNLMLDGYVE----LDDLDSAWKFFQKIPEQNVVSWV 237
A + FE M+E DVV+W+ + GY + + L + + N V+ +
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 238 TMLSGYARNGRMLEARRLFD---QMPI---------RNVVAWNAMIAAYVQRGQIEEAAR 285
++LSG A G ++ + + + PI N+V N +I Y + +++ A
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKVDTARA 428
Query: 286 LF--IEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYKNIAAQ-------TAMIS-- 334
+F + ER+ V+WT MI GY + ++A LL +M ++ + A+++
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 335 --GYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWN 392
++ + A + ++ + N +I YA+CG + +A +F M+ K+ VTW
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 393 TMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKK 452
+++ GY ++A+ IF+EM RR G K
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEM--RR------------------------------IGFK 576
Query: 453 ADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELL 512
D TL L AC+H + G + N + T++ ++ L
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYF---------------NRMKTVFGVSPGPEHYACL 621
Query: 513 FKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLV 572
VD++ G A G A++L EEM ME P PV ++ LS C G V
Sbjct: 622 ------VDLL-------GRA--GRLNAALRLIEEMPME---PPPVVWVAFLSCCRIHGKV 663
Query: 573 DGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMV-----KGMKIKPNA--- 624
+ G E +TE+ + Y + +L + AGR + + KG+K +P
Sbjct: 664 ELGEYAAEKITELASNHD--GSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Query: 625 -GIWGT 629
GI GT
Sbjct: 722 EGIKGT 727
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 215/498 (43%), Gaps = 84/498 (16%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
S VF N + + + +A K+F +MS + V++NS+I +YAK G+ A ++F +M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 73 PQ----------------------------------------RNLVSWNSMIAGYLHNDK 92
+N+ N ++ Y
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGM 279
Query: 93 VKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAG 149
+ EA +F M D+ SW M+ Y++ G E A LF+ + K D W+A ++G
Sbjct: 280 MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 150 YAKIGNYNEA----KKLLDAMPSKNIVSWNSMLSGYTKNG------EMHL-ASKFFEAM- 197
YA+ G EA +++L + N V+ S+LSG G E+H A K+ +
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLR 399
Query: 198 -----EERDVVSWNLMLDGYVELDDLDSAWKFFQKIP--EQNVVSWVTMLSGYARNGRML 250
+E V+ N ++D Y + +D+A F + E++VV+W M+ GY+++G
Sbjct: 400 KNGHGDENMVI--NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 251 EARRLFDQM--------PIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSW---T 299
+A L +M P ++ + A + +I + + ++N V
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 300 TMIDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFD---KIGTH- 355
+ID Y + + +AR + D M KN T++++GY + +EA IFD +IG
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 356 DVVCWNVMIKGYAQCGRMDEAINLFRQM-----VNKDIVTWNTMIAGYAQIRQMDDAVKI 410
D V V++ + G +D+ + F +M V+ + ++ + +++ A+++
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 411 FEEMGKRRNTVSWNALIS 428
EEM V W A +S
Sbjct: 638 IEEMPMEPPPVVWVAFLS 655
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 326 bits (836), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 222/714 (31%), Positives = 353/714 (49%), Gaps = 74/714 (10%)
Query: 47 VTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMF-- 104
V +++I ++KN R DA K+F N+ WN++IAG L N +LF +M
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 105 --RPDLFSWA-LMITCYT----RKGELEKARELFDLLPNKEDTACWNAMVAGYAKIGNYN 157
+PD ++++ ++ C + R G++ +AR + ED A+V YAK G+
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVI---KCGAEDVFVCTAIVDLYAKCGHMA 302
Query: 158 EAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDD 217
EA ++ +P+ ++VSW MLSGYTK+ + A + F+ M V N + +
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 218 LDS---------AWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLF---DQMPIRNVV 265
S AW F + V+ ++S Y+++G + + ++F D + +N+V
Sbjct: 363 RPSMVCEASQVHAWVFKSGFYLDSSVA-AALISMYSKSGDIDLSEQVFEDLDDIQRQNIV 421
Query: 266 AWNAMIAAYVQRGQIEEAARLFIEM-------PERNPVSWTTMIDGYVRIAKLDEARRLL 318
N MI ++ Q + +A RLF M E + S +++D + + K L
Sbjct: 422 --NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC-LNLGKQVHGYTLK 478
Query: 319 DQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAIN 378
+ ++ +++ + Y + ++E+ ++F I D CW MI G+ + G + EAI
Sbjct: 479 SGLVL-DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIG 537
Query: 379 LFRQMVNKDIVTWNTMIA-------------------GYAQIRQMDDA-------VKIFE 412
LF +M++ + +A GY +D V ++
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYS 597
Query: 413 EMGKRR------------NTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLAC 460
+ G + + VS ++LISG+ Q+ D +F M G D ++
Sbjct: 598 KCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISS 657
Query: 461 ALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVD 520
L A A LG Q+H K G + VG+SL+TMY+K G I + F + D
Sbjct: 658 ILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 521 VISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFE 580
+I+W +LIA YA +G A EA++++ M +G PD VTF+GVLSACSH GLV+
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 581 CMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNI 640
M + Y IEP HY CM+D L R+GRL EA + M IKP+A +WGTLL AC++H +
Sbjct: 778 SMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEV 837
Query: 641 KLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPG 694
+LG++A +K ELEP Y LSN+ AE G WDEVE+ R M+G+G QK+PG
Sbjct: 838 ELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 163/716 (22%), Positives = 321/716 (44%), Gaps = 103/716 (14%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMP- 73
VF ++ SG + +A K+F + Q + V+ N MIS Y ++ ++ + F +M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 74 ---QRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKAREL 130
+ N +S+ S+I+ + LFS ++ C+T ++
Sbjct: 144 LGFEANEISYGSVISAC--------------SALQAPLFSE--LVCCHT----IKMGYFF 183
Query: 131 FDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLA 190
++++ +A++ ++K + +A K+ S N+ WN++++G +N
Sbjct: 184 YEVVE--------SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 191 SKFFEAM----EERDVVSWNLMLDGYVELDDLDSAWKFFQ----KIPEQNVVSWVTMLSG 242
F M ++ D +++ +L L+ L K Q K ++V ++
Sbjct: 236 FDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG-KVVQARVIKCGAEDVFVCTAIVDL 294
Query: 243 YARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEM----PERNPVSW 298
YA+ G M EA +F ++P +VV+W M++ Y + A +F EM E N +
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 299 TTMIDGYVRIAKLDEARR----LLDQMPYKNIAAQTAMISGYVQNKRMDEANQIF---DK 351
T++I R + + EA + + Y + + A+IS Y ++ +D + Q+F D
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 352 IGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNK------------------------- 386
I ++V NVMI ++Q + +AI LF +M+ +
Sbjct: 415 IQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQV 472
Query: 387 -----------DIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEF 435
D+ +++ Y++ ++++ K+F+ + + N W ++ISGF + +
Sbjct: 473 HGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC-WASMISGFNEYGY 531
Query: 436 HLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNS 495
+A+ +F M +G D STLA L+ C+ +L G++IH +++G + +G++
Sbjct: 532 LREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSA 591
Query: 496 LITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPD 555
L+ MY+KCG ++ A ++ +D +S +SLI+GY+ +G + LF +MVM G D
Sbjct: 592 LVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMD 651
Query: 556 PVTFIGVLSACSHVGLVDGGLKLFECMTEV-YAIEPLVEHYACMIDLLSRAGRLDE---A 611
+L A + G ++ +T++ EP V + ++ + S+ G +D+ A
Sbjct: 652 SFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSKFGSIDDCCKA 709
Query: 612 FEMVKGMKIKPNAGIWGTLLGACRMH--QNIKLGRIAVEKLSELEPQKTSCYALLS 665
F + G P+ W L+ + H N L + K +P K + +LS
Sbjct: 710 FSQING----PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/593 (25%), Positives = 263/593 (44%), Gaps = 139/593 (23%)
Query: 163 LDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAW 222
D +K+++SW Y+ +G M A+K F+ + + DVVS N+M+ GY + + +
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 223 KFFQKIP----EQNVVSWVTMLSG-----------------------------------Y 243
+FF K+ E N +S+ +++S +
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 244 ARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEM----PERNPVSWT 299
++N R +A ++F NV WN +IA ++ LF EM + + +++
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 300 TMIDGY-----VRIAKLDEARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGT 354
+++ +R K+ +AR + + +++ TA++ Y + M EA ++F +I
Sbjct: 256 SVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 355 HDVVCWNVMIKGYAQCGRMDEAINLFRQM------VNKDIVT------------------ 390
VV W VM+ GY + A+ +F++M +N VT
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 391 --W-------------NTMIAGYAQIRQMDDAVKIFEEMG--KRRNTVSWNALISGFLQN 433
W +I+ Y++ +D + ++FE++ +R+N V N +I+ F Q+
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQS 431
Query: 434 EFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVG 493
+ A+++F M QEG + D ++ LS L L LG+Q+H +KSG V DL VG
Sbjct: 432 KKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVG 488
Query: 494 NSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVA 553
+SL T+Y+KCG ++ + LF+ D W S+I+G+ G EAI LF EM+ +G +
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 554 PDPVTFIGVLSAC-SHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAF 612
PD T VL+ C SH L G K T I+ ++ + ++++ S+ G L
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRG--KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL---- 602
Query: 613 EMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLS 665
KL R ++L EL+P SC +L+S
Sbjct: 603 ----------------------------KLARQVYDRLPELDP--VSCSSLIS 625
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 141/700 (20%), Positives = 277/700 (39%), Gaps = 173/700 (24%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM----PQRNL 77
I K+ R E+A K+F N +N++I+ +N LF +M + +
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDS 251
Query: 78 VSWNSMIAGY-----LHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFD 132
+++S++A L KV +AR + K D+F ++ Y + G + +A E+F
Sbjct: 252 YTYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 133 LLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAM---------------------PS--- 168
+PN W M++GY K + A ++ M PS
Sbjct: 310 RIPNPS-VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 169 --KNIVSW-------------NSMLSGYTKNGEMHLASKFFEAMEE---RDVVSWNLMLD 210
+ +W +++S Y+K+G++ L+ + FE +++ +++V N+M+
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 211 GYVELDDLDSAWKFFQKIPEQNV----------------------VSWVTMLSG------ 242
+ + A + F ++ ++ + V T+ SG
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLT 486
Query: 243 --------YARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEM---- 290
Y++ G + E+ +LF +P ++ W +MI+ + + G + EA LF EM
Sbjct: 487 VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG 546
Query: 291 --PERNPVSWTTM-------------IDGYVRIAKLDEARRLLDQMPYKNIAAQTAMISG 335
P+ + ++ I GY A +D+ L +A+++
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL-----------GSALVNM 595
Query: 336 YVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIV------ 389
Y + + A Q++D++ D V + +I GY+Q G + + LFR MV
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 390 ---------------------------------TWNTMIAGYAQIRQMDDAVKIFEEMGK 416
++++ Y++ +DD K F ++
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING 715
Query: 417 RRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAH-----LAAL 471
+ ++W ALI+ + Q+ +AL+++ LM ++G K D T LSAC+H +
Sbjct: 716 -PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF 774
Query: 472 QLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDAD-PVDVISWNSLIAG 530
L + I+ N +V ++ + GR++ AE + D + W +L+A
Sbjct: 775 HLNSMVKDYGIEPE--NRHYV--CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Query: 531 YAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVG 570
I+G E K+ + +E D +I + + + VG
Sbjct: 831 CKIHGE-VELGKVAAKKAIELEPSDAGAYISLSNILAEVG 869
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 50 NSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM----FR 105
+S+++ Y+K G ++D K F Q+ +L++W ++IA Y + K EA ++++ M F+
Sbjct: 691 SSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFK 750
Query: 106 PDLFSWALMITCYTRKGELEKAR-------ELFDLLPNKEDTACWNAMVAGYAKIGNYNE 158
PD ++ +++ + G +E++ + + + P C MV + G E
Sbjct: 751 PDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVC---MVDALGRSGRLRE 807
Query: 159 AKKLLDAMPSK-NIVSWNSMLSGYTKNGEMHL---ASKFFEAMEERDV---VSWNLMLDG 211
A+ ++ M K + + W ++L+ +GE+ L A+K +E D +S + +L
Sbjct: 808 AESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAE 867
Query: 212 YVELDDLDSAWKFFQKIPEQNVVSWVTM 239
E D+++ K + Q W ++
Sbjct: 868 VGEWDEVEETRKLMKGTGVQKEPGWSSV 895
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 291/510 (57%), Gaps = 15/510 (2%)
Query: 237 VTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN-- 294
V ++ YA + AR++FD++P RNV+ N MI +YV G E ++F M N
Sbjct: 78 VKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137
Query: 295 PVSWT--TMIDGYVRIAKLDEARRLLDQMPYKNIAAQ----TAMISGYVQNKRMDEANQI 348
P +T ++ + R++ +++ ++S Y + + EA +
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 349 FDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQM----VNKDIVTWNTMIAGYAQIRQM 404
D++ DVV WN ++ GYAQ R D+A+ + R+M ++ D T +++ +
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE 257
Query: 405 DDAV--KIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACAL 462
+ +F +MGK+ + VSWN +I +++N ++A++++ M +G + D ++ L
Sbjct: 258 NVMYVKDMFFKMGKK-SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 463 SACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVI 522
AC +AL LG++IH + + +L + N+LI MYAKCG ++ A +F++ DV+
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 523 SWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECM 582
SW ++I+ Y +G +A+ LF ++ G+ PD + F+ L+ACSH GL++ G F+ M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Query: 583 TEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKL 642
T+ Y I P +EH ACM+DLL RAG++ EA+ ++ M ++PN +WG LLGACR+H + +
Sbjct: 437 TDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 643 GRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKN 702
G +A +KL +L P+++ Y LLSN++A+AGRW+EV +R M+ G +K PG S +EV
Sbjct: 497 GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
Query: 703 QIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
IHTFL GD ++ EI L L +++
Sbjct: 557 IIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 179/383 (46%), Gaps = 46/383 (12%)
Query: 52 MISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM----FRPD 107
++ AYA V ARK+F+++P+RN++ N MI Y++N E ++F M RPD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 108 LFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMVAGYAKIGNYNEAKKLLD 164
+++ ++ + G + R++ N +V+ Y K G +EA+ +LD
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 165 AMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEE-RDVVSWNLMLDGYVELDDLDSAWK 223
M +++VSWNS++ GY +N +F +A+E R++ S + D + S
Sbjct: 200 EMSRRDVVSWNSLVVGYAQN------QRFDDALEVCREMESVKISHDA----GTMASLLP 249
Query: 224 FFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEA 283
+NV+ Y ++ +F +M +++V+WN MI Y++ EA
Sbjct: 250 AVSNTTTENVM--------YVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 284 ARLFIEMP----ERNPVSWTTMIDGYVRIAKLDEARRLLDQMPYK----NIAAQTAMISG 335
L+ M E + VS T+++ + L +++ + K N+ + A+I
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353
Query: 336 YVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNK----DIVTW 391
Y + +++A +F+ + + DVV W MI Y GR +A+ LF ++ + D + +
Sbjct: 354 YAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 392 NTMIAGYAQIRQMDDAVKIFEEM 414
T +A + +++ F+ M
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLM 436
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 149/347 (42%), Gaps = 80/347 (23%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDA------- 65
S +F N ++ GK G + EA + +MS+++ V++NS++ YA+N R +DA
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 66 ------------------------------RKLFEQMPQRNLVSWNSMIAGYLHNDKVKE 95
+ +F +M +++LVSWN MI Y+ N E
Sbjct: 233 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 96 ARELFDKM----FRPDLFSWALMITCYTRKGELEKARELFDLLPNKEDTACWNAMVAGYA 151
A EL+ +M F PD A+ IT +LP DT+ A+ G
Sbjct: 293 AVELYSRMEADGFEPD----AVSIT---------------SVLPACGDTS---ALSLG-K 329
Query: 152 KIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDG 211
KI Y E KKL+ N++ N+++ Y K G + A FE M+ RDVVSW M+
Sbjct: 330 KIHGYIERKKLI-----PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 212 YVELDDLDSAWKFFQKIPEQNVV----SWVTMLSGYARNGRMLEARRLFDQMPIRNVVA- 266
Y A F K+ + +V ++VT L+ + G + E R F M +
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 267 ----WNAMIAAYVQRGQIEEAARLFIEMP-ERNPVSWTTMIDGYVRI 308
M+ + G+++EA R +M E N W ++ G R+
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL-GACRV 490
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 180/423 (42%), Gaps = 53/423 (12%)
Query: 31 VEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHN 90
V A K+F ++ ++N + N MI +Y NG + K+F M N+
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV------------- 136
Query: 91 DKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKARELFDLLPN---KEDTACWNAMV 147
RPD +++ ++ + G + R++ N +V
Sbjct: 137 --------------RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLV 182
Query: 148 AGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAME----ERDVV 203
+ Y K G +EA+ +LD M +++VSWNS++ GY +N A + ME D
Sbjct: 183 SMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242
Query: 204 SWNLMLDGY--VELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPI 261
+ +L +++ F K+ ++++VSW M+ Y +N +EA L+ +M
Sbjct: 243 TMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA 302
Query: 262 R----NVVAWNAMIAAYVQRGQIEEAARL--FIEMPERNP--VSWTTMIDGYVRIAKLDE 313
+ V+ +++ A + ++ +IE + P + +ID Y + L++
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 314 ARRLLDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIG----THDVVCWNVMIKGYAQ 369
AR + + M +++ + TAMIS Y + R +A +F K+ D + + + +
Sbjct: 363 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSH 422
Query: 370 CGRMDEAINLFRQMVNKDIVT-----WNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWN 424
G ++E + F+ M + +T M+ + ++ +A + ++M N W
Sbjct: 423 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWG 482
Query: 425 ALI 427
AL+
Sbjct: 483 ALL 485
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 49/219 (22%)
Query: 45 NTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKM- 103
N + N++I YAK G + AR +FE M R++VSW +MI+ Y + + +A LF K+
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 104 ---FRPDLFSWALMITCYTRKGELEKARELFDLL-------PNKEDTACWNAMVAGYAKI 153
PD ++ + + G LE+ R F L+ P E AC MV +
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC---MVDLLGRA 459
Query: 154 GNYNEAKKLLDAM---PSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLD 210
G EA + + M P++ + W ++L + + +
Sbjct: 460 GKVKEAYRFIQDMSMEPNERV--WGALLGACRVHSDTDIG-------------------- 497
Query: 211 GYVELDDLDSAWKFFQKIPEQNVVSWVTMLSG-YARNGR 248
L +A K FQ PEQ+ + +LS YA+ GR
Sbjct: 498 -------LLAADKLFQLAPEQS--GYYVLLSNIYAKAGR 527
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 475 RQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAIN 534
R +H I + +G L+ YA + +A +F + +VI N +I Y N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 535 GNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEV------YAI 588
G E +K+F M V PD TF VL ACS G + G K+ T+V +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 589 EPLVEHYA-C--------MIDLLSRAG---------------RLDEAFEMVKGM---KIK 621
LV Y C ++D +SR R D+A E+ + M KI
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 622 PNAGIWGTLLGA 633
+AG +LL A
Sbjct: 239 HDAGTMASLLPA 250
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 26/214 (12%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQK----NTVTYNSMISAYAKNGRVNDARKLFEQMPQR-- 75
I+ G SGR +A+ +FS++ +++ + + ++A + G + + R F+ M
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 441
Query: 76 ---NLVSWNSMIAGYLHNDKVKEA-RELFDKMFRPDLFSW-ALMITCYTRKGE---LEKA 127
L M+ KVKEA R + D P+ W AL+ C L A
Sbjct: 442 ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAA 501
Query: 128 RELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNI--------VSWNSMLS 179
+LF L P E + + + YAK G + E + + M SK + V N ++
Sbjct: 502 DKLFQLAP--EQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 180 GYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYV 213
+ H S E E DV+ + GYV
Sbjct: 560 TFLVGDRSHPQSD--EIYRELDVLVKKMKELGYV 591
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 325 bits (832), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 293/504 (58%), Gaps = 12/504 (2%)
Query: 239 MLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSW 298
++ Y + G+ ++A ++FDQM +RN+ +WN M++ YV+ G + A +F MPER+ VSW
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 299 TTMIDGYVRIAKLDEARRLLDQMPYKNIA----AQTAMISGYVQNKRMDEANQIFDKIGT 354
TM+ GY + L EA + I + +++ V+++++ Q ++
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 355 ----HDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQIRQMDDAVKI 410
+VV +I YA+CG+M+ A F +M KDI W T+I+GYA++ M+ A K+
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 411 FEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAA 470
F EM ++ N VSW ALI+G+++ AL +F M G K + T + L A A +A+
Sbjct: 268 FCEMPEK-NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIAS 326
Query: 471 LQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELLFKDAD-PVDVISWNSLIA 529
L+ G++IH I++ + V +SLI MY+K G ++ +E +F+ D D + WN++I+
Sbjct: 327 LRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMIS 386
Query: 530 GYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIE 589
A +G +A+++ ++M+ V P+ T + +L+ACSH GLV+ GL+ FE MT + I
Sbjct: 387 ALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIV 446
Query: 590 PLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEK 649
P EHYAC+IDLL RAG E ++ M +P+ IW +LG CR+H N +LG+ A ++
Sbjct: 447 PDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADE 506
Query: 650 LSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQIHTFL- 708
L +L+P+ ++ Y LLS+++A+ G+W+ VEK+R M+ K+ SWIE++ ++ F
Sbjct: 507 LIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTV 566
Query: 709 -SGDPKQCRTAEICNTLKTLAAQI 731
G R EI L LAA I
Sbjct: 567 SDGSHAHARKEEIYFILHNLAAVI 590
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 215/475 (45%), Gaps = 93/475 (19%)
Query: 137 KEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEA 196
+ +T N ++ Y K G +A K+ D M +N+ SWN+M+SGY K+G + A F++
Sbjct: 79 RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDS 138
Query: 197 MEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQ------------------------- 231
M ERDVVSWN M+ GY + +L A F+++
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLN 198
Query: 232 --------------NVVSWVTMLSGYARNGRMLEARRLFDQMPIRNVVAWNAMIAAYVQR 277
NVV +++ YA+ G+M A+R FD+M ++++ W +I+ Y +
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKL 258
Query: 278 GQIEEAARLFIEMPERNPVSWTTMIDGYVRIAK----LDEARRLL------DQMPYKNIA 327
G +E A +LF EMPE+NPVSWT +I GYVR LD R+++ +Q + +
Sbjct: 259 GDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL 318
Query: 328 AQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNK- 386
+A I+ K + I + + +V + +I Y++ G ++ + +FR +K
Sbjct: 319 CASASIASLRHGKEI-HGYMIRTNVRPNAIVI-SSLIDMYSKSGSLEASERVFRICDDKH 376
Query: 387 DIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLM 446
D V WNTMI+ AQ A+++ ++M K R
Sbjct: 377 DCVFWNTMISALAQHGLGHKALRMLDDMIKFR---------------------------- 408
Query: 447 TQEGKKADHSTLACALSACAHLAALQLG-RQIHHLAIKSGYVNDLFVGNSLITMYAKCGR 505
+ + +TL L+AC+H ++ G R + ++ G V D LI + + G
Sbjct: 409 ----VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 506 IQNAELLFKDAD-PV--DVISWNSLIAGYAINGNATEAIKLFEEMVM---EGVAP 554
+ EL+ K + P D WN+++ I+GN K +E++ E AP
Sbjct: 465 FK--ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAP 517
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 165/337 (48%), Gaps = 24/337 (7%)
Query: 5 LKSIGNKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVND 64
LK G K N I K G+ +A K+F QM +N ++N+M+S Y K+G +
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVR 131
Query: 65 ARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDL----FSWALMITCYTR 120
AR +F+ MP+R++VSWN+M+ GY + + EA + + R + FS+A ++T +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 121 KGELEKARE-----LFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNIVSWN 175
+L+ R+ L + +C +++ YAK G AK+ D M K+I W
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSC--SIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 176 SMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKI------P 229
+++SGY K G+M A K F M E++ VSW ++ GYV + A F+K+ P
Sbjct: 250 TLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Query: 230 EQNVVSWVTMLSGYARNGRMLEARRLFDQMPIRNV----VAWNAMIAAYVQRGQIEEAAR 285
EQ S + L A + + + M NV + +++I Y + G +E + R
Sbjct: 310 EQFTFS--SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 286 LF-IEMPERNPVSWTTMIDGYVRIAKLDEARRLLDQM 321
+F I + + V W TMI + +A R+LD M
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 446 MTQEGKKADHSTLACALSACAHLAALQLGRQIH-HLAIKSGYVNDLFVGNSLITMYAKCG 504
+TQ+G + LA L C +L+ G+ IH HL I + + N LI MY KCG
Sbjct: 37 LTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCG 96
Query: 505 R-------------------------------IQNAELLFKDADPVDVISWNSLIAGYAI 533
+ + A ++F DV+SWN+++ GYA
Sbjct: 97 KPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ 156
Query: 534 NGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVE 593
+GN EA+ ++E G+ + +F G+L+AC + + + + +V
Sbjct: 157 DGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV- 215
Query: 594 HYAC-MIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRI-AVEKLS 651
+C +ID ++ G+++ A M +K + IW TL+ KLG + A EKL
Sbjct: 216 -LSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTTLISG-----YAKLGDMEAAEKLF 268
Query: 652 ELEPQK 657
P+K
Sbjct: 269 CEMPEK 274
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 22 ITQLGKSGRVEEAIKIFSQMSQK-NTVTYNSMISAYAKNGRVNDARKLFEQM----PQRN 76
I KSG +E + ++F K + V +N+MISA A++G + A ++ + M Q N
Sbjct: 353 IDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPN 412
Query: 77 LVSWNSMIAGYLHNDKVKEARELFDKM-----FRPDLFSWALMITCYTRKGELEKARELF 131
+ ++ H+ V+E F+ M PD +A +I R G ++
Sbjct: 413 RTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKI 472
Query: 132 DLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLD---AMPSKNIVSWNSMLSGYTKNGEMH 188
+ +P + D WNA++ GN KK D + ++ + + S Y +G+
Sbjct: 473 EEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWE 532
Query: 189 LASKFFEAMEERDV-----VSW 205
L K M++R V VSW
Sbjct: 533 LVEKLRGVMKKRRVNKEKAVSW 554
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 221/771 (28%), Positives = 375/771 (48%), Gaps = 92/771 (11%)
Query: 46 TVTYNSMISAYAKNGRVNDARKLFEQMPQRNLVSWNSMIAGYLHNDKVKEARELFDKMFR 105
T + S +S ++G AR+LF+ +P+ V WN++I G++ N+ EA + +M +
Sbjct: 39 TPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKK 98
Query: 106 PDLFSWALMITCYTRKGELEKARELFDLLPNK------------EDTACWNAMVAGYAKI 153
F+ YT L+ E +L K N+++ Y
Sbjct: 99 TAPFTNC---DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC 155
Query: 154 GN------YNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDV----V 203
N Y+ +K+ D M KN+V+WN+++S Y K G A + F M +V V
Sbjct: 156 LNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPV 215
Query: 204 SWNLMLDGYVELDDLDSAWKFF--------QKIPEQNVVSWVTMLSGYARNGRMLEARRL 255
S+ + + A F+ + + + VVS + +S YA G + +RR+
Sbjct: 216 SFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVS--SAISMYAELGDIESSRRV 273
Query: 256 FDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPER-----NPVSWTTMIDGYVRIAK 310
FD RN+ WN MI YVQ + E+ LF+E + V++ + +
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ 333
Query: 311 LDEARRL-------LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVM 363
++ R+ ++P I +++ Y + + ++ +F + DVV WN M
Sbjct: 334 VELGRQFHGFVSKNFRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTM 390
Query: 364 IKGYAQCGRMDEAINLFRQMVNK----DIVTWNTMIAGYAQIRQMDD------------- 406
I + Q G DE + L +M + D +T +++ + +R +
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI 450
Query: 407 ---------------------AVKIFEEMG-KRRNTVSWNALISGFLQNEFHLDALKIFV 444
+ K+FE G R+ +WN++ISG+ QN +F
Sbjct: 451 QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 445 LMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCG 504
M ++ + + T+A L AC+ + ++ LG+Q+H +I+ ++FV ++L+ MY+K G
Sbjct: 511 KMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAG 570
Query: 505 RIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLS 564
I+ AE +F + +++ ++I GY +G AI LF M G+ PD +TF+ VLS
Sbjct: 571 AIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
Query: 565 ACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPN- 623
ACS+ GL+D GLK+FE M EVY I+P EHY C+ D+L R GR++EA+E VKG+ + N
Sbjct: 631 ACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNI 690
Query: 624 AGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKT-SCY-ALLSNMHAEAGRWDEVEKVR 681
A +WG+LLG+C++H ++L E+L++ + K S Y LLSNM+AE +W V+KVR
Sbjct: 691 AELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVR 750
Query: 682 VSMEGSGAQKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTLAAQIR 732
M G +K+ G S IE+ ++ F+S D + ++EI + + LA +R
Sbjct: 751 RGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 210/499 (42%), Gaps = 88/499 (17%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLF-EQMP 73
+F + I+ + G +E + ++F ++N +N+MI Y +N + ++ +LF E +
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG 310
Query: 74 QRNLVS-------WNSMIAGYLHNDKVKEARELFDKMFR--PDLFSWALMITCYTRKGEL 124
+ +VS S ++ + ++ K FR P + +LM+ Y+R G +
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVM-YSRCGSV 369
Query: 125 EKARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSK----NIVSWNSMLSG 180
K+ +F L + D WN M++ + + G +E L+ M + + ++ ++LS
Sbjct: 370 HKSFGVF-LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA 428
Query: 181 ----------------------------------YTKNGEMHLASKFFE--AMEERDVVS 204
Y+K+G + ++ K FE ERD +
Sbjct: 429 ASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQAT 488
Query: 205 WNLMLDGYVELDDLDSAWKFFQKIPEQNV----VSWVTMLSGYARNGRM--------LEA 252
WN M+ GY + + + F+K+ EQN+ V+ ++L ++ G +
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 253 RRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERNPVSWTTMIDGYVRIAKLD 312
R+ DQ NV +A++ Y + G I+ A +F + ERN V++TTMI GY + +
Sbjct: 549 RQYLDQ----NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGE 604
Query: 313 EARRLLDQMPYKNIAAQ----TAMISGYVQNKRMDEANQIFDKI--------GTHDVVCW 360
A L M I A++S + +DE +IF+++ + C
Sbjct: 605 RAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCI 664
Query: 361 NVMIKGYAQCGRMDEAINLFRQMVNKDIVT--WNTMIAGYAQIRQMDDAVKIFEEMG--- 415
M+ + GR++EA + + + + W +++ +++ A + E +
Sbjct: 665 TDML---GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFD 721
Query: 416 KRRNTVSWNALISGFLQNE 434
K +N + L+S E
Sbjct: 722 KGKNFSGYEVLLSNMYAEE 740
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 215/776 (27%), Positives = 384/776 (49%), Gaps = 78/776 (10%)
Query: 21 KITQLGKSGRVEEAIKIFSQMSQKN----TVTYNSMISAYAKNGRVNDARKLFEQMPQ-- 74
+++ L K+G ++EA+ + ++M +N Y ++ ++ +++ ++ +
Sbjct: 41 RVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG 100
Query: 75 ----RNLVSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELEKA--- 127
RN ++ Y D ++ A LF K+ ++FSWA +I R G E A
Sbjct: 101 DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMG 160
Query: 128 ------RELFD---LLPNKEDTAC----WNAMVAG-----------------------YA 151
E+F ++PN AC W+ G Y
Sbjct: 161 FVEMLENEIFPDNFVVPNV-CKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 152 KIGNYNEAKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEERDVVSWNLMLD- 210
K G ++A K+ D +P +N V+WN+++ GY +NG+ A + F M ++ V + +
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 211 --------GYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIR 262
G VE A + N++ ++L+ Y + G + A +FD+M +
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 263 NVVAWNAMIAAYVQRGQIEEAARLF----IEMPERNPVSWTTMIDGYVRIAKLDEARRL- 317
+VV WN +I+ YVQ+G +E+A + +E + + V+ T++ R L + +
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 318 ---LDQMPYKNIAAQTAMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMD 374
+ +I + ++ Y + + +A ++FD D++ WN ++ YA+ G
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 375 EAINLFRQM----VNKDIVTWNTMIAGYAQIRQMDDAVKIFEEM---GKRRNTVSWNALI 427
EA+ LF M V +++TWN +I + Q+D+A +F +M G N +SW ++
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 428 SGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYV 487
+G +QN +A+ M + G + + ++ ALSACAHLA+L +GR IH I++
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 488 NDLF-VGNSLITMYAKCGRIQNAELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEE 546
+ L + SL+ MYAKCG I AE +F ++ N++I+ YA+ GN EAI L+
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 547 MVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAG 606
+ G+ PD +T VLSAC+H G ++ +++F + +++P +EHY M+DLL+ AG
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 607 RLDEAFEMVKGMKIKPNAGIWGTLLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSN 666
++A +++ M KP+A + +L+ +C + +L KL E EP+ + Y +SN
Sbjct: 699 ETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 667 MHAEAGRWDEVEKVRVSMEGSGAQKQPGCSWIEVKNQ--IHTFLSGDPKQCRTAEI 720
+A G WDEV K+R M+ G +K+PGCSWI++ + +H F++ D R EI
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 141/588 (23%), Positives = 267/588 (45%), Gaps = 56/588 (9%)
Query: 15 VFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM-- 72
VF + GK G +++A K+F ++ +N V +N+++ Y +NG+ +A +LF M
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 73 ----PQRNLVSW---NSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELE 125
P R VS S G + K A + + M ++ +L+ Y + G +E
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLL-NFYCKVGLIE 326
Query: 126 KARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMPSKNI----VSWNSMLSGY 181
A +FD + K D WN +++GY + G +A + M + + V+ +++S
Sbjct: 327 YAEMVFDRMFEK-DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 182 TKNGEMHLASKF----FEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWV 237
+ + L + E D+V + ++D Y + + A K F E++++ W
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWN 445
Query: 238 TMLSGYARNGRMLEARRLFDQMPIR----NVVAWNAMIAAYVQRGQIEEAARLFIEMPER 293
T+L+ YA +G EA RLF M + NV+ WN +I + ++ GQ++EA +F++M
Sbjct: 446 TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS 505
Query: 294 ----NPVSWTTMIDGYVRIAKLDEARRLLDQMPYK----NIAAQTAMISGYVQNKRMDEA 345
N +SWTTM++G V+ +EA L +M N + T +S +
Sbjct: 506 GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIG 565
Query: 346 NQIFDKI-----GTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVTWNTMIAGYAQ 400
I I + V ++ YA+CG +++A +F + ++ N MI+ YA
Sbjct: 566 RTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYAL 625
Query: 401 IRQMDDAVKIF---EEMGKRRNTVSWNALISGFLQNEFHLDALKIFV-LMTQEGKKA--D 454
+ +A+ ++ E +G + + ++ ++S A++IF ++++ K +
Sbjct: 626 YGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLE 685
Query: 455 HSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNAELL-- 512
H L L A A L R I + K D + SL+ A C + + EL+
Sbjct: 686 HYGLMVDLLASAGETEKAL-RLIEEMPFKP----DARMIQSLV---ASCNKQRKTELVDY 737
Query: 513 ----FKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDP 556
+++P + ++ ++ YA+ G+ E +K+ E M +G+ P
Sbjct: 738 LSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKP 785
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 4/225 (1%)
Query: 409 KIFEEMGKRRNTVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHL 468
K +E ++ S+ +S +N +AL + M + L C +
Sbjct: 24 KHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYE 83
Query: 469 AALQLGRQIHHLAIKSG--YVNDLFVGNSLITMYAKCGRIQNAELLFKDADPVDVISWNS 526
L G+QIH +K+G Y + ++ L+ YAKC ++ AE+LF +V SW +
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143
Query: 527 LIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVY 586
+I G A+ F EM+ + PD V AC + G + + +
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVK-S 202
Query: 587 AIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGTLL 631
+E V + + D+ + G LD+A ++ + + NA W L+
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR-NAVAWNALM 246
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 13 SYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQM 72
S V + + K G + +A K+F N+MISAYA G + +A L+ +
Sbjct: 580 SLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Query: 73 PQRNLVSWNSMIAGYL----HNDKVKEARELF-----DKMFRPDLFSWALMITCYTRKGE 123
L N I L H + +A E+F + +P L + LM+ GE
Sbjct: 640 EGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGE 699
Query: 124 LEKARELFDLLPNKEDTACWNAMVAGYAK-----IGNYNEAKKLLDAMPSKNIVSWNSML 178
EKA L + +P K D ++VA K + +Y ++KLL++ P +N ++ ++
Sbjct: 700 TEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDY-LSRKLLESEP-ENSGNYVTIS 757
Query: 179 SGYTKNGEMHLASKFFEAMEER 200
+ Y G K E M+ +
Sbjct: 758 NAYAVEGSWDEVVKMREMMKAK 779
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 284/518 (54%), Gaps = 42/518 (8%)
Query: 252 ARRLFDQMPIRNVVAWNAMIAAYVQRGQIEEAARLFIEMPERN--------PV------- 296
A R+F+Q+ NV N++I A+ Q Q +A +F EM P
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 297 -SW-----------------------TTMIDGYVRIAKLD--EARRLLDQMPYKNIAAQT 330
SW +ID Y R L +A +L ++M ++ +
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 331 AMISGYVQNKRMDEANQIFDKIGTHDVVCWNVMIKGYAQCGRMDEAINLFRQMVNKDIVT 390
+M+ G V+ + +A ++FD++ D++ WN M+ GYA+C M +A LF +M ++ V+
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
Query: 391 WNTMIAGYAQIRQMDDAVKIFEEMG-KRRNTVSWNALISGFLQNEFHLDALKIFVLMTQE 449
W+TM+ GY++ M+ A +F++M +N V+W +I+G+ + +A ++ M
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 450 GKKADHSTLACALSACAHLAALQLGRQIHHLAIKSGYVNDLFVGNSLITMYAKCGRIQNA 509
G K D + + L+AC L LG +IH + +S ++ +V N+L+ MYAKCG ++ A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 510 ELLFKDADPVDVISWNSLIAGYAINGNATEAIKLFEEMVMEGVAPDPVTFIGVLSACSHV 569
+F D D++SWN+++ G ++G+ EAI+LF M EG+ PD VTFI VL +C+H
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 570 GLVDGGLKLFECMTEVYAIEPLVEHYACMIDLLSRAGRLDEAFEMVKGMKIKPNAGIWGT 629
GL+D G+ F M +VY + P VEHY C++DLL R GRL EA ++V+ M ++PN IWG
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 630 LLGACRMHQNIKLGRIAVEKLSELEPQKTSCYALLSNMHAEAGRWDEVEKVRVSMEGSGA 689
LLGACRMH + + + ++ L +L+P Y+LLSN++A A W+ V +R M+ G
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 690 QKQPGCSWIEVKNQIHTFLSGDPKQCRTAEICNTLKTL 727
+K G S +E+++ IH F D ++ +I L +L
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 215/429 (50%), Gaps = 27/429 (6%)
Query: 20 KKITQLGKSGRVEEAIKIFSQMSQKNTV----TYNSMISAYAKNGRVNDARKLFEQMPQR 75
+++ L K + + ++ +Q+ ++N +ISA + + N A ++F Q+ +
Sbjct: 21 ERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEP 80
Query: 76 NLVSWNSMIAGYLHNDKVKEARELFDKMFR----PDLFSWALMITCYTRKGELEKARELF 131
N+ NS+I + N + +A +F +M R D F++ ++ + + L + +
Sbjct: 81 NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 132 DLLPN---KEDTACWNAMVAGYAKIGNYN--EAKKLLDAMPSKNIVSWNSMLSGYTKNGE 186
+ + D NA++ Y++ G +A KL + M ++ VSWNSML G K GE
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 187 MHLASKFFEAMEERDVVSWNLMLDGYVELDDLDSAWKFFQKIPEQNVVSWVTMLSGYARN 246
+ A + F+ M +RD++SWN MLDGY ++ A++ F+K+PE+N VSW TM+ GY++
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 247 GRMLEARRLFDQMPI--RNVVAWNAMIAAYVQRGQIEEAARLFIEMPER----NPVSWTT 300
G M AR +FD+MP+ +NVV W +IA Y ++G ++EA RL +M + + +
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 301 MIDGYVRIAKLDEARRLLDQMPYKNIAAQT----AMISGYVQNKRMDEANQIFDKIGTHD 356
++ L R+ + N+ + A++ Y + + +A +F+ I D
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 357 VVCWNVMIKGYAQCGRMDEAINLFRQM----VNKDIVTWNTMIAGYAQIRQMDDAVKIFE 412
+V WN M+ G G EAI LF +M + D VT+ ++ +D+ + F
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 413 EMGKRRNTV 421
M K + V
Sbjct: 441 SMEKVYDLV 449
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 160/329 (48%), Gaps = 54/329 (16%)
Query: 19 NKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLFEQMPQRNLV 78
N + L K+G + +A ++F +M Q++ +++N+M+ YA+ ++ A +LFE+MP+RN V
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 79 SWNSMIAGYLHNDKVKEARELFDKMFRP--DLFSWALMITCYTRKGELEKARELFDLLPN 136
SW++M+ GY ++ AR +FDKM P ++ +W ++I Y KG L++A L D +
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 137 ---KEDTAC-----------------------------------WNAMVAGYAKIGNYNE 158
K D A NA++ YAK GN +
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 159 AKKLLDAMPSKNIVSWNSMLSGYTKNGEMHLASKFFEAMEER----DVVSWNLML----- 209
A + + +P K++VSWN+ML G +G A + F M D V++ +L
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428
Query: 210 DGYVE--LDDLDSAWKFFQKIPEQNVVSWVTMLSGYARNGRMLEARRLFDQMPIR-NVVA 266
G ++ +D S K + +P+ V + ++ R GR+ EA ++ MP+ NVV
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQ--VEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVI 486
Query: 267 WNAMIAAYVQRGQIEEAARLFIEMPERNP 295
W A++ A +++ A + + + +P
Sbjct: 487 WGALLGACRMHNEVDIAKEVLDNLVKLDP 515
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 17/277 (6%)
Query: 364 IKGYAQCGRMDEAINLFRQMVNK----DIVTWNTMIAGYAQIRQMDDAVKIFEEMGKRRN 419
++ +C +++ L Q++ + D+ +I+ + RQ + AV++F ++ + N
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV-QEPN 81
Query: 420 TVSWNALISGFLQNEFHLDALKIFVLMTQEGKKADHSTLACALSACAHLAALQLGRQIHH 479
N+LI QN A +F M + G AD+ T L AC+ + L + + +H+
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 480 LAIKSGYVNDLFVGNSLITMYAKCG--RIQNAELLFKDADPVDVISWNSLIAGYAINGNA 537
K G +D++V N+LI Y++CG +++A LF+ D +SWNS++ G G
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 538 TEAIKLFEEMVMEGVAPDPVTFIGVLSACSHVGLVDGGLKLFECMTEVYAIEPLVEHYAC 597
+A +LF+EM D +++ +L + + +LFE M E + ++
Sbjct: 202 RDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVS-----WST 252
Query: 598 MIDLLSRAGRLDEAFEMVKGMKIKP-NAGIWGTLLGA 633
M+ S+AG ++ A M M + N W ++
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 10 NKGSYVFNQNKKITQLGKSGRVEEAIKIFSQMSQKNTVTYNSMISAYAKNGRVNDARKLF 69
N GS + N + K G +++A +F+ + +K+ V++N+M+ +G +A +LF
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 70 EQMPQRNL----VSWNSMIAGYLHNDKVKEARELFDKMFRPDLFSWALMITCYTRKGELE 125
+M + + V++ +++ H + E + F M
Sbjct: 405 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM---------------------- 442
Query: 126 KARELFDLLPNKEDTACWNAMVAGYAKIGNYNEAKKLLDAMP-SKNIVSWNSMLSGYTKN 184
+++DL+P E C +V ++G EA K++ MP N+V W ++L +
Sbjct: 443 --EKVYDLVPQVEHYGC---LVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMH 497
Query: 185 GEMHLASKFFEAMEERD 201
E+ +A + + + + D
Sbjct: 498 NEVDIAKEVLDNLVKLD 514
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 267,480,784
Number of Sequences: 539616
Number of extensions: 10962152
Number of successful extensions: 45563
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 26621
Number of HSP's gapped (non-prelim): 3334
length of query: 740
length of database: 191,569,459
effective HSP length: 125
effective length of query: 615
effective length of database: 124,117,459
effective search space: 76332237285
effective search space used: 76332237285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)