Your job contains 1 sequence.
>004648
MASKKKLSFEESWALMEQGIAKLKKILKGLPEPPFASEECMTLYTIVYDLCSIELPSAQD
CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL
DRFYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV
DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR
AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR
TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG
DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV
LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV
VLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKF
YGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQL
NLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDR
REINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDL
INREFIERDSKDPTMFNYSA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004648
(740 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 2316 2.8e-240 1
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 2032 3.5e-210 1
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 1134 5.0e-115 1
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 773 8.6e-100 2
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 914 1.0e-91 1
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 899 4.0e-90 1
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 599 2.2e-85 2
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 842 4.4e-84 1
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 819 1.2e-81 1
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 772 2.5e-81 2
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 815 3.2e-81 1
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 815 3.2e-81 1
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 815 3.2e-81 1
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 815 3.2e-81 1
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 815 3.2e-81 1
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 791 6.5e-81 2
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 791 6.5e-81 2
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 791 6.5e-81 2
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 791 6.5e-81 2
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 791 6.5e-81 2
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 791 6.5e-81 2
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 808 1.8e-80 1
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 805 3.7e-80 1
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 779 1.2e-79 2
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 792 8.7e-79 1
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 792 8.7e-79 1
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 792 8.7e-79 1
TAIR|locus:2025881 - symbol:AT1G59790 species:3702 "Arabi... 792 8.7e-79 1
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 790 1.4e-78 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 786 3.8e-78 1
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 762 7.5e-78 2
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 546 1.4e-77 2
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 546 1.4e-77 2
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 736 4.1e-75 2
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 749 3.1e-74 1
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 735 9.6e-73 1
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 727 6.7e-72 1
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 717 7.7e-71 1
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 667 1.2e-69 2
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 435 1.8e-69 2
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 419 2.0e-69 2
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 572 8.7e-69 2
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 689 7.2e-68 1
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 686 1.5e-67 1
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 684 2.4e-67 1
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 684 2.4e-67 1
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 683 3.1e-67 1
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 681 5.1e-67 1
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 681 5.1e-67 1
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 681 5.1e-67 1
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 681 5.1e-67 1
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 680 6.5e-67 1
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 678 1.1e-66 1
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 678 1.1e-66 1
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 654 3.7e-64 1
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 652 6.0e-64 1
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 652 6.0e-64 1
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 652 6.0e-64 1
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 651 7.6e-64 1
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 307 2.2e-63 3
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 646 2.6e-63 1
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 644 4.2e-63 1
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 640 1.1e-62 1
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 624 5.5e-61 1
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 623 7.1e-61 1
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 622 9.0e-61 1
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 463 1.1e-59 2
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 561 6.1e-58 2
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 583 1.2e-56 1
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 581 2.0e-56 1
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 462 2.1e-56 2
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 573 1.4e-55 1
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 560 3.4e-54 1
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 560 8.1e-54 1
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 360 9.0e-53 3
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 360 9.0e-53 3
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 533 2.4e-51 1
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 518 2.1e-49 1
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 516 6.7e-48 1
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 516 6.7e-48 1
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 513 1.2e-47 1
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 428 3.6e-47 2
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 500 1.0e-46 1
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 416 3.3e-45 2
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 472 1.9e-44 1
TAIR|locus:2025941 - symbol:AT1G59800 species:3702 "Arabi... 459 5.3e-43 1
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 314 7.1e-43 2
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 410 3.0e-42 2
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 375 1.1e-38 2
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 352 1.3e-38 2
UNIPROTKB|Q93034 - symbol:CUL5 "Cullin-5" species:9606 "H... 352 1.5e-38 2
UNIPROTKB|I3LFR2 - symbol:CUL5 "Uncharacterized protein" ... 352 1.5e-38 2
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 350 2.1e-38 2
RGD|621742 - symbol:Cul5 "cullin 5" species:10116 "Rattus... 348 5.3e-38 2
UNIPROTKB|Q9JJ31 - symbol:Cul5 "Cullin-5" species:10116 "... 348 5.3e-38 2
MGI|MGI:1922967 - symbol:Cul5 "cullin 5" species:10090 "M... 350 8.3e-38 2
UNIPROTKB|F1SR60 - symbol:F1SR60 "Uncharacterized protein... 316 2.4e-35 2
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 295 8.3e-32 2
SGD|S000003235 - symbol:CUL3 "Ubiquitin-protein ligase" s... 347 2.6e-28 1
UNIPROTKB|F1RUC1 - symbol:CUL4B "Uncharacterized protein"... 344 4.7e-28 1
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 2316 (820.3 bits), Expect = 2.8e-240, P = 2.8e-240
Identities = 443/741 (59%), Positives = 558/741 (75%)
Query: 4 KKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQDCSY 63
+K + E+ W M+ EP F SE+ M LYT +Y++C+ + P Y
Sbjct: 3 RKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPH----DY 58
Query: 64 SQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRF 123
SQ+LY KY E FEE++ S VLP+ +K EFMLRE K+W N VM RWL RFF YLDR+
Sbjct: 59 SQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRY 118
Query: 124 YVRSQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIF 183
++ ++ L L EV + FRD VY +L V+ VIAL+D+EREGE+IDRAL+K +DI+
Sbjct: 119 FI-ARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIY 177
Query: 184 VGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVY 243
V IG+ M+ Y +DFE M+ D YY RKASSWI DSCP+YM+K+EECLKKER+R +
Sbjct: 178 VEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAH 237
Query: 244 YFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGL 303
Y H+ SE KL+EKVQHELLVV +QLLE E SGCRAL+ +K DDLSR++RLY + GL
Sbjct: 238 YLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGL 297
Query: 304 EPVAGIFKQYFIDQGKALVHQAEEDVRNKTAN----MEQNLVGKILELHDKFMAYVSICF 359
EPVA IFKQ+ +G ALV QAE+ N+ AN EQ L+ K++ELHDK+M YV+ CF
Sbjct: 298 EPVANIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECF 357
Query: 360 GDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVI 419
+H LF ALKEAFE+FCN+++ SSAE+LATFCDN+ K +EKLSDE +E T++KV+
Sbjct: 358 QNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVV 417
Query: 420 VLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITD 479
LL Y KDLFAEFYRKKLARRLLFD+ N D++++ L+KLKQ GG FT+KMEGM+TD
Sbjct: 418 KLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTD 477
Query: 480 VVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKK 539
+ LARENQ + +D+ SN P DL+V VLTTG WPSYK F +NLPSEM+K VE FK
Sbjct: 478 LTLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKG 537
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQ 599
FY TKTK RKLTWIYSLG CH+NGKF+ KAIELIVSTYQAA L+LFN D+LS++EIL Q
Sbjct: 538 FYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQ 597
Query: 600 LNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDD 659
LNL+ DL+R+LHSLSC+K+KIL KEPNTKT+SQ+D+FEFN+KFTDRMRRI+IPLPPVD+
Sbjct: 598 LNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDE 657
Query: 660 RREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDD 719
R+++ EDV KDRR+ IDAA+VRIMKSRKVLG+QQL+SECVE LS FKP+IKAIK R++D
Sbjct: 658 RKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMED 717
Query: 720 LINREFIERDSKDPTMFNYSA 740
LI R+++ERD ++P MF Y A
Sbjct: 718 LITRDYLERDKENPNMFRYLA 738
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 2032 (720.4 bits), Expect = 3.5e-210, P = 3.5e-210
Identities = 396/746 (53%), Positives = 535/746 (71%)
Query: 3 SKKKLSFEESWALMEQXXXXXXXXXXXXP-EPPFASEECMTLYTIVYDLCSIELPSAQDC 61
+KK E W++ME P EPPF + M LYT V++LC+ + P+
Sbjct: 2 AKKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPN---- 57
Query: 62 SYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLD 121
YSQ++Y +YG V+ ++ + VLP+ +K GE+MLRE VK+W N ++ RWL FFEYLD
Sbjct: 58 DYSQQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLD 117
Query: 122 RFYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
RFY R + +L V + FRD VY++L+ +D V+ALI +EREGE+IDRAL+K +D
Sbjct: 118 RFYTR-RGSHPTLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVID 176
Query: 182 IFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRA 241
++ G G+ ++ Y +DFE +++D+ YY R AS W +SCP+YMIKAEE L+ E++R
Sbjct: 177 VYCGNGMGELVKYEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERV 236
Query: 242 VYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRT 301
Y H+ +E KL+ KVQ+ELLVV QL+ENE SGCRAL+ +K DDL+R++RLY
Sbjct: 237 TNYLHSTTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQ 296
Query: 302 GLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTAN------MEQNLVGKILELHDKFMAYV 355
GL+PVA +FKQ+ +G AL+ QA E +K A+ +Q L+ ++++LHDKFM YV
Sbjct: 297 GLDPVADLFKQHITVEGSALIKQATEAATDKAASTSGLKVQDQVLIRQLIDLHDKFMVYV 356
Query: 356 SICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDA-EKLSDETVERT 414
CF H LF ALKEAFEVFCN+++ +SSAEILAT+CDN+ K EKL +E +E T
Sbjct: 357 DECFQKHSLFHKALKEAFEVFCNKTVAGVSSAEILATYCDNILKTGGGIEKLENEDLELT 416
Query: 415 MDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKME 474
++KV+ LL Y KDLFAEF+RKK ARRLLFD+ GN ++++ L+K K+ G FT+KME
Sbjct: 417 LEKVVKLLVYISDKDLFAEFFRKKQARRLLFDRNGNDYHERSLLTKFKELLGAQFTSKME 476
Query: 475 GMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGV 534
GM+TD+ LA+E+QT ++ S N +K D +V VLTTG WPSYK LNLP EMV V
Sbjct: 477 GMLTDMTLAKEHQTNFVEFLSVNKTKKLGMDFTVTVLTTGFWPSYKTTDLNLPIEMVNCV 536
Query: 535 ESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFS 594
E+FK +YGTKT +R+L+WIYSLG C + GKF+ K IE++V+TYQAA L+LFN+ +RLS++
Sbjct: 537 EAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNNTERLSYT 596
Query: 595 EILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL 654
EIL QLNL DL R+LHSLSC K+KIL KEP ++ IS +D+FEFN+KFTD+MRRIR+PL
Sbjct: 597 EILEQLNLGHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTFEFNSKFTDKMRRIRVPL 656
Query: 655 PPVDDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIK 714
PP+D+R++I EDV KDRR+ IDAALVRIMKSRKVLG+QQL+SECVE LS FKP+IK IK
Sbjct: 657 PPMDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEHLSKMFKPDIKMIK 716
Query: 715 SRIDDLINREFIERDSKDPTMFNYSA 740
RI+DLI+R+++ERD+ +P F Y A
Sbjct: 717 KRIEDLISRDYLERDTDNPNTFKYLA 742
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 233/486 (47%), Positives = 313/486 (64%)
Query: 4 KKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQDCSY 63
K+ + EE W++M+ EPPF + + LYTI+YD+C + P+ Y
Sbjct: 12 KELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPN----DY 67
Query: 64 SQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRF 123
SQ LY KY V + + + VLPS ++ GE+MLRE VK+W N ++ RWL RF YLDRF
Sbjct: 68 SQELYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDRF 127
Query: 124 YVRSQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIF 183
YV ++ GL +L +V F D VY++++ + +D ++ALI +EREGE+IDR LVK +D++
Sbjct: 128 YV-ARRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVY 186
Query: 184 VGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVY 243
G G+ M Y +DFE ++ D YY RKAS W DSCP+YM+KAEECLK E++R
Sbjct: 187 CGNGVGQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTN 246
Query: 244 YFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGL 303
Y H+ +E KL+EKVQ+ELLVV QL+ENE SGC AL+ +K DLSR++RLY GL
Sbjct: 247 YLHSTTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGL 306
Query: 304 EPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHK 363
EP+A +FKQ+ +G AL+ QA + N+ A+ Q LV K +ELHDK+M YV CF H
Sbjct: 307 EPIADLFKQHVTAEGNALIKQAADAATNQDASASQVLVRKEIELHDKYMVYVDECFQKHS 366
Query: 364 LFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKN-SDAEKLSDETVERTMDKVIVLL 422
LF LKEAFEVFCN+++ SSAEILAT+CDN+ K +EKLSDE E T++KV+ LL
Sbjct: 367 LFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVNLL 426
Query: 423 GYFKYKDLFAEFYRKKLARRLLFDKGG-NKDY-DKTFLSKLK----QHSGGHFTTKMEGM 476
Y KDLFAEFYRKK ARRLLFD+ G K+ D T +L+ + + TTK+
Sbjct: 427 VYISDKDLFAEFYRKKQARRLLFDRSGIMKEVTDITLARELQTNFVDYLSANMTTKLGID 486
Query: 477 ITDVVL 482
T VL
Sbjct: 487 FTVTVL 492
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 192/381 (50%), Positives = 257/381 (67%)
Query: 362 HKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVL 421
H +++ + E F+ S+ E FC+ + S E + D ++
Sbjct: 351 HDKYMVYVDECFQ---KHSLFHKLLKEAFEVFCNKTVAGAS----SAEILATYCDNILKT 403
Query: 422 LGYF-KYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTK-MEGMITD 479
G K D E +K+ L++ +KD F K KQ F + +TD
Sbjct: 404 RGGSEKLSDEATEITLEKVVNLLVYIS--DKDLFAEFYRK-KQARRLLFDRSGIMKEVTD 460
Query: 480 VVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKK 539
+ LARE QT D+ S+N+ K D +V VLTTG WPSYK LNLP+EMV VE+FK
Sbjct: 461 ITLARELQTNFVDYLSANMTTKLGIDFTVTVLTTGFWPSYKTTDLNLPTEMVNCVEAFKV 520
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQ 599
FYGTKT +R+L+WIYSLG CH+ GKFE K +EL+VSTYQAA L+LFN+A+RLS++EI Q
Sbjct: 521 FYGTKTNSRRLSWIYSLGTCHILGKFEKKTMELVVSTYQAAVLLLFNNAERLSYTEISEQ 580
Query: 600 LNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDD 659
LNL+ DL+R+LHSLSC K+KIL KEP ++TIS++D+FEFN+KFTD+MR+IR+PLPP+D+
Sbjct: 581 LNLSHEDLVRLLHSLSCLKYKILIKEPMSRTISKTDTFEFNSKFTDKMRKIRVPLPPMDE 640
Query: 660 RREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDD 719
R+++ EDV KDRR+ IDAALVRIMKSRKVL +QQL+SECVE LS FKP+IK IK RI+D
Sbjct: 641 RKKVVEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSECVEHLSKMFKPDIKMIKKRIED 700
Query: 720 LINREFIERDSKDPTMFNYSA 740
LINR+++ERD+++ F Y A
Sbjct: 701 LINRDYLERDTENANTFKYVA 721
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 773 (277.2 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 177/565 (31%), Positives = 310/565 (54%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY ++ ++H+++ V + + E L E W N + Y+DR YV+
Sbjct: 69 LYNNLKKMVDKHLKA-VAKTVSESIDEKFLLELNSSWINHKTSMLMIRDILMYMDRNYVK 127
Query: 127 SQAGLASLIEVPVVVFRDRVY--KDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFV 184
Q L+S+ ++ + +FRD V +K + +T+++++ +EREGE IDR L+K V + +
Sbjct: 128 -QNNLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLI 186
Query: 185 GIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
+G+ + Y +DFE+ ++ +Y ++ + I SCP+YM K E CLK+E +R +Y
Sbjct: 187 DLGVNSKNVYIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHY 246
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
+ SE KL E + +L+ H L++ E SG +++ +K +DL R++ L+ GL
Sbjct: 247 LDSSSEPKLKEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLN 306
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
+ + Y + G+ +V +E+ ++ Q+L L+L DK+ + + K
Sbjct: 307 LMKDVISSYVKEIGRGIV--MDEEKTKESGTYFQSL----LDLKDKYDNLLQNALYNDKQ 360
Query: 365 FLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGY 424
F+ ++++AFE F N + S E ++ F D K + +S+E V+ +DK+++L
Sbjct: 361 FIHSIQQAFEYFIN---LNPKSPEYISLFIDEKLKKG-LKGVSEEEVDIILDKILMLFRL 416
Query: 425 FKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLAR 484
+ KD+F ++Y++ LA+RLL + + D ++ ++KLK G FT+K+EGM TD+ L++
Sbjct: 417 IQEKDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQ 476
Query: 485 ENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTK 544
+ + + NL + DL+V VLTTG WP+ NLP E++ E+FK +Y +
Sbjct: 477 DTMSGFKTYIQ-NLKKALPIDLNVHVLTTGFWPTQNTANCNLPREILLCCEAFKSYYLSN 535
Query: 545 TKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNK 604
R L W ++G + F K+ EL VS+YQ L+LFND +L+F EI Q +
Sbjct: 536 HNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPT 595
Query: 605 GDLIRVLHSLSCSKHKILNKE-PNT 628
DL R L +L+ K+KIL++E P+T
Sbjct: 596 IDLKRNLLALTNPKNKILDRELPST 620
Score = 237 (88.5 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 51/133 (38%), Positives = 80/133 (60%)
Query: 613 SLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL-----PPVDDRREINEDV 667
S S S I P+ K+I +SD F FN KF ++ R+++ PV+++ E + V
Sbjct: 639 SPSSSSSSISTPTPS-KSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEK-ETRDKV 696
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
+DR+H I+A++VRIMK+RK L + L+SE ++ L F P +K RI+ LI RE++E
Sbjct: 697 DEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLE 756
Query: 728 RDSKDPTMFNYSA 740
R +D ++NY A
Sbjct: 757 RSKQDRKIYNYMA 769
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 223/690 (32%), Positives = 375/690 (54%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY + H++ + E +G L E K+W N + Y+DR
Sbjct: 64 FGEKLYTGFIATMTSHLK-EKSKLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYMDR 122
Query: 123 FYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVR--DTVIALIDEEREGEKIDRALVKKAV 180
Y+ S + + + ++RD V K R +T++ L+ +ER GE IDR L++ +
Sbjct: 123 TYIESTKK-THVHPMGLNLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRNVI 181
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+F+ +G Y++DFE+ +D + +Y ++ +I + C +Y+ K+E+ L +E +R
Sbjct: 182 KMFMDLG---ESVYQEDFEKPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIER 238
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
+Y +SE K+ V+ E++ H +L+ E SG ++ +K++DL R++ L+
Sbjct: 239 VAHYLDAKSEEKITSVVEKEMIANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVT 298
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL V + + + GK LV E ++K +E V ++L+ DK+ ++ FG
Sbjct: 299 NGLVTVRDVMTSHLREMGKQLVTDPE---KSKDP-VE--FVQRLLDERDKYDKIINTAFG 352
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ K F AL +FE F N + S E ++ F D+ + + ++D VE +DKV++
Sbjct: 353 NDKTFQNALNSSFEYFIN---LNARSPEFISLFVDDKLRKG-LKGITDVDVEVILDKVMM 408
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L Y + KD+F ++Y++ LA+RLL K + D +++ + KLK G FT+K+EGM TD+
Sbjct: 409 LFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDM 468
Query: 481 VLARENQTALDDWFSSN--LNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFK 538
+ ++ + ++ S+ L+E P L V VLTTGSWP+ NLP+E+ E F+
Sbjct: 469 ---KTSEDTMRGFYGSHPELSEGPT--LIVQVLTTGSWPTQPAVPCNLPAEVSVLCEKFR 523
Query: 539 KFY-GTKTKARKLTWIYSLGNCHVNGKF-ELKAIELIVSTYQAACLMLFNDADRLSFSEI 596
+Y GT T R+L+W ++G + F + + EL VST+Q LMLFN++DRLS+ EI
Sbjct: 524 SYYLGTHT-GRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEI 582
Query: 597 LTQLNLNKGDLIRVLHSLSCSKHK-ILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLP 655
+ DL R L SL+C K K ++ KEP +K I + D F N KFT + +++I
Sbjct: 583 EQATEIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDKFTSKFYKVKIGTV 642
Query: 656 PVD-----DRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEI 710
+++E + V +DR+ I+AA+VRIMKSRK+L + +I+E + L F
Sbjct: 643 VAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANP 702
Query: 711 KAIKSRIDDLINREFIERDSKDPTMFNYSA 740
IK RI+ LI R+F+ERDS D ++ Y A
Sbjct: 703 TEIKKRIESLIERDFLERDSTDRKLYRYLA 732
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
Identities = 223/689 (32%), Positives = 375/689 (54%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
Y +LY H++ ++ S E+ +G L ++W + N + + Y+DR
Sbjct: 64 YGDKLYTGLVTTMTFHLK-EICKSIEEAQGGAFLELLNRKWNDHNKALQMIRDILMYMDR 122
Query: 123 FYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVR--DTVIALIDEEREGEKIDRALVKKAV 180
YV S + E+ + ++RD V K R +T++ L+ +ER GE IDR L++ +
Sbjct: 123 TYV-STTKKTHVHELGLHLWRDNVVYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMRNVI 181
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+F+ +G Y+ DFE+ ++ + +Y ++ +I + C EY+ KAE+ L +E +R
Sbjct: 182 KMFMDLG---ESVYQDDFEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVER 238
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
V Y +SE+K+ V+ E++ H +L+ E SG ++ +K++D+ R++ L+
Sbjct: 239 VVNYLDAKSEAKITSVVEREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVA 298
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL V + + + GK LV E ++K +E V ++L+ DK+ +++ F
Sbjct: 299 NGLVTVRDVMTLHLREMGKQLVTDPE---KSKDP-VE--FVQRLLDERDKYDRIINMAFN 352
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ K F AL +FE F N + S E ++ F D+ + + + +E V+ +DKV++
Sbjct: 353 NDKTFQNALNSSFEYFVN---LNTRSPEFISLFVDDKLRKG-LKGVGEEDVDLILDKVMM 408
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L Y + KD+F ++Y++ LA+RLL K + D ++ + KLK G FT+K+EGM TD+
Sbjct: 409 LFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLEGMFTDM 468
Query: 481 VLARENQTALDDWFSS-NLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKK 539
+ + T L + S L+E P L V VLTTGSWP+ NLP+E+ E F+
Sbjct: 469 KTSHD--TLLGFYNSHPELSEGPT--LVVQVLTTGSWPTQPTIQCNLPAEVSVLCEKFRS 524
Query: 540 FY-GTKTKARKLTWIYSLGNCHVNGKF-ELKAIELIVSTYQAACLMLFNDADRLSFSEIL 597
+Y GT T R+L+W ++G + F + + EL VST+Q LMLFN++DRLS+ EI
Sbjct: 525 YYLGTHT-GRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIE 583
Query: 598 TQLNLNKGDLIRVLHSLSCSKHK-ILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPP 656
+ DL R L S++C K K +L KEP +K I++ D F N +F + +++I
Sbjct: 584 QATEIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVNDRFASKFYKVKIGTVV 643
Query: 657 VD-----DRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIK 711
+++E + V +DR+ I+AA+VRIMKSR+VL + +I+E + L F
Sbjct: 644 AQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQTRFLANPT 703
Query: 712 AIKSRIDDLINREFIERDSKDPTMFNYSA 740
IK RI+ LI R+F+ERD+ D ++ Y A
Sbjct: 704 EIKKRIESLIERDFLERDNTDRKLYRYLA 732
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 599 (215.9 bits), Expect = 2.2e-85, Sum P(2) = 2.2e-85
Identities = 142/514 (27%), Positives = 261/514 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ RLY EV EH++ V + L + + W + + Y+DR
Sbjct: 228 HGNRLYYGLREVVSEHLEHKVRADVLEALHSNFLPKLNQAWTDHQTSMVMIRDILMYMDR 287
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++++ +R+ ++ ++ EER GE I+ +K A
Sbjct: 288 VYVQ-QREVDNVYNLGLILFRDQVVRYSEIQKALREKLLGMVMEERHGEAINHLAIKNAC 346
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +GI Y +DFE+ + + +Y ++ +++ ++ Y+ K E + +E R
Sbjct: 347 SMLITLGINSRTVYEEDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSR 406
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
A Y +E +++ V+ EL+ H ++E E SG +I K +DL+ ++L+ +
Sbjct: 407 AALYLDKDTEPRIVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKLFSRLK 466
Query: 301 T-GLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICF 359
GL+ +A Y +QG+ LV + EE+ QNL L+L D+F ++ F
Sbjct: 467 EEGLKVIADTMSAYLREQGRMLVKE-EENGNTNPITFVQNL----LDLKDRFDQFLVHSF 521
Query: 360 GDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVI 419
+ ++F + FE F N + S E L+ F D+ K + +S++ +E +DK +
Sbjct: 522 ANDRIFKNVISSDFEHFLN---LNNKSPEYLSLFIDDKLKKG-GKGMSEQEIESILDKTM 577
Query: 420 VLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITD 479
VL + KD+F +Y+ LA+RLL +K + D++K +SKLK G FT+K+EGM D
Sbjct: 578 VLFRFLLEKDVFERYYKTHLAKRLLLNKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKD 637
Query: 480 VVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFF-GLNLPSEMVKGVESFK 538
+ ++ ++ ++N +L+V +LTTG WP+ N+P+ + + FK
Sbjct: 638 MSVSNTIMDEFKNFVNNNNLSLGGVELTVRILTTGFWPTQTATPNCNIPAAPREAFDIFK 697
Query: 539 KFYGTKTKARKLTWIYSLGNCHVNGKFE-LKAIE 571
FY K R+LT +G ++N F KA+E
Sbjct: 698 NFYLNKHSGRQLTLQPQMGTAYINAVFYGRKAVE 731
Score = 285 (105.4 bits), Expect = 2.2e-85, Sum P(2) = 2.2e-85
Identities = 66/178 (37%), Positives = 101/178 (56%)
Query: 572 LIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKIL--NKEPN 627
L VSTYQ L+LFN+ D L++ +I + ++ + +L+R L SLS K ++L N +
Sbjct: 757 LQVSTYQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVRNSKTK 816
Query: 628 TKTISQSDSFEFNAKFTDRMRRIRIPLPPVD-----DRREINEDVGKDRRHNIDAALVRI 682
TK I +D F N F + R++I +R+E V +DR+H I+AA+VRI
Sbjct: 817 TKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKVDEDRKHEIEAAIVRI 876
Query: 683 MKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
MK+RK L + L+S+ L F P IK RI+ LI RE+++R +D ++NY A
Sbjct: 877 MKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRIEGLIEREYLQRSPEDRKVYNYLA 934
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 188/557 (33%), Positives = 306/557 (54%)
Query: 188 ILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHT 247
+ D+ Y FEE+ +D Y ++ + PEY+ + L +E +R +Y +
Sbjct: 282 LCDLQIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLRHYLDS 341
Query: 248 RSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVA 307
++ LI V+ ELL H +L+ G +L+ + DL+ ++ L + G +
Sbjct: 342 STKHPLIYNVEKELLAEHLTSILQK---GLDSLLEDNRLSDLTLLYGLLSRVKNGTSELC 398
Query: 308 GIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLM 367
G F + +G+ +V E+D +++V +L+ DK V CF ++ F
Sbjct: 399 GNFNGFIKKKGRTIVIDPEKD---------KSMVQDLLDFKDKMDVIVRTCFEHNEKFTN 449
Query: 368 ALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKY 427
+L+EAFE F N+ + AE++A + D ++ + + +DE +E+T+DK++VL +
Sbjct: 450 SLREAFEFFINQRANK--PAELIAKYVDMKLRSGN-KGTTDEELEKTLDKIMVLFRFIHG 506
Query: 428 KDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQ 487
KD+F FY+K LA+RLL K + D +K+ LSKLKQ GG FT+K+EGM D+ L+R+
Sbjct: 507 KDVFEAFYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSRDIN 566
Query: 488 TALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKA 547
A SN + DL V +LT G WP+Y + +P + + + F KFY K
Sbjct: 567 IAFRGHALSNNRDVHNLDLCVSILTMGYWPTYAPTEVTMPPQFINPQQIFNKFYLEKHSG 626
Query: 548 RKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDL 607
RKL W +LGNC + +F+ EL+VS +QA L+LFND LS+ EIL + G+L
Sbjct: 627 RKLQWQPTLGNCMLRAQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGEL 686
Query: 608 IRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRI---PLPPVDDRREIN 664
R L SL+C + +++ K P + I D F+FN +FT+++ RI+I + ++ ++
Sbjct: 687 RRTLQSLACGRARVITKTPKGREILDGDQFDFNNEFTNKLFRIKINQIQMKETNEEQKAT 746
Query: 665 ED-VGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINR 723
E+ V +DR++ IDAA+VRIMK RK L + LI+E L+ KP +K RI+ LI+R
Sbjct: 747 EERVFQDRQYQIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKPA--DLKKRIESLIDR 804
Query: 724 EFIERDSKDPTMFNYSA 740
+++ERD + +NY A
Sbjct: 805 DYMERDKDNQNQYNYVA 821
Score = 249 (92.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 75/292 (25%), Positives = 139/292 (47%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDV-LPSFED-KRGEFMLREFV 100
LY V ++CS ++ AQ LY K E+ E+H++ ++ L + +L E +
Sbjct: 145 LYQAVVNMCSHKM-DAQ-------LYAKLKELTEQHVKRNIKLKELTGGSMDKLILLEKI 196
Query: 101 KQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDL---KRDVRD 156
W ++R F Y+DR YV + + S+ ++ + +FR ++ KR V D
Sbjct: 197 NHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTVHSIWDMGLDLFRIHFAQNSVVQKRTV-D 255
Query: 157 TVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASS 216
++ LI++ER+G +DR L+K V + + D+ Y FEE+ +D Y ++
Sbjct: 256 GLLTLIEKERQGSTVDRGLLKSLVRM-----LCDLQIYTSSFEEKFLDATNQLYKAESQR 310
Query: 217 WILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSG 276
+ PEY+ + L +E +R +Y + ++ LI V+ ELL H +L+ G
Sbjct: 311 KMQELEVPEYLQHVNKRLAEENERLRHYLDSSTKHPLIYNVEKELLAEHLTSILQK---G 367
Query: 277 CRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
+L+ + DL+ ++ L + G + G F + +G+ +V E+D
Sbjct: 368 LDSLLEDNRLSDLTLLYGLLSRVKNGTSELCGNFNGFIKKKGRTIVIDPEKD 419
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 184/555 (33%), Positives = 299/555 (53%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE + +++ Y + + PEY+ + L++E DR + Y +
Sbjct: 347 DLQIYQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQST 406
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DLS +++L+ R G++ +
Sbjct: 407 QKPLIATVEKQLLGEHLTAILQK---GLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQH 463
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + +CF ++ F+ A+
Sbjct: 464 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDVCFLKNEKFVNAM 514
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + KD
Sbjct: 515 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKD 571
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 572 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 631
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ N N +L+V +LT G WP+Y ++LP EMVK E FK FY K RK
Sbjct: 632 FKQQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRK 691
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+C + +F+ EL VS +Q L++FN+ + S EI + G+L R
Sbjct: 692 LQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRR 751
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K + D F N F ++ RI+I V+++ E
Sbjct: 752 TLQSLACGKARVLTKSPKGKDVEDGDKFTCNDDFRHKLFRIKINQIQMKETVEEQASTTE 811
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK L + L+SE L KP +K RI+ LI+R++
Sbjct: 812 RVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDY 869
Query: 726 IERDSKDPTMFNYSA 740
+ERD ++P +NY A
Sbjct: 870 MERDKENPNQYNYIA 884
Score = 273 (101.2 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 75/299 (25%), Positives = 145/299 (48%)
Query: 36 ASEECMTLYTIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFEDKRGE 93
A E +I Y+L + CSY S LY + ++ E+H+++ + ED
Sbjct: 193 AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDS 252
Query: 94 FM-LREFVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLK 151
+ L++ K W++ + ++R F +LDR YV + L S+ ++ + +FR + D K
Sbjct: 253 VLFLKKIDKCWQD-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRTHIISDQK 311
Query: 152 RDVR--DTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCY 209
+ D ++ LI+ ER GE IDR+L++ + + + D+ Y+ FE + +++
Sbjct: 312 VQNKTIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEHRFLEETNRL 366
Query: 210 YLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQL 269
Y + + PEY+ + L++E DR + Y ++ LI V+ +LL H +
Sbjct: 367 YAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEKQLLGEHLTAI 426
Query: 270 LENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ G L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 427 LQK---GLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKD 482
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 772 (276.8 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 210/710 (29%), Positives = 369/710 (51%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 86 LYKRLKDFLRSYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLDGICAYLNRHWVR 144
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +R+ +++ L + V + V+ L+++ER GE I+ LV V
Sbjct: 145 RECDEGRKGIYEIYSLALVTWRECLFRPLNKQVTNAVLKLVEKERNGETINTRLVSGVVQ 204
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 205 SYVELGLNEDDAFVKGPTLSVYKEYFEAQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 264
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 265 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 320
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L GL + + + + +QG A + + + N Q L++H K+
Sbjct: 321 YNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSALNDPKMYVQTT----LDVHKKYN 376
Query: 353 AYVSICFGDHKLFLMAL-KEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEK 405
A V F + F+ AL K A F N + V S E+LA +CD+L K S ++
Sbjct: 377 ALVMSAFNNDAGFVAALDKVACGRFINNNAVTRMAQSSSKSPELLARYCDSLLKKS-SKN 435
Query: 406 LSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS 465
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ
Sbjct: 436 PEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQAC 495
Query: 466 GGHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFG 523
G +T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 496 GFEYTSKLQRMFQDIGVSKD----LNEQFKKHLSNSEPLDLDFSIQVLSSGSWPFQQSCT 551
Query: 524 LNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTY 577
LPSE+ + + F FYG++ RKLTW+Y L NC N ++ L+A ST+
Sbjct: 552 FALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKN-RYTLQA-----STF 605
Query: 578 QAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSD 635
Q A L+ FN + S ++ + L++VL L SK +L E N + + D
Sbjct: 606 QMAILLQFNTENCYSVQQLADSTQIKTDILVQVLQILLKSKLLVLEDENANIDEMDFKPD 665
Query: 636 SF-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLG 690
+ + + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKVL
Sbjct: 666 TLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLK 725
Query: 691 YQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
+QQL++E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 726 HQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 775
Score = 63 (27.2 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 27/109 (24%), Positives = 52/109 (47%)
Query: 36 ASEECMTLYTIVYDLC-SIE------LPSAQDCSYS------QRLYVKYGEVFEEHMQS- 81
A M LYT VY+ C S+ +PS++ + Q + ++ + ++ ++S
Sbjct: 38 ARSRYMELYTHVYNYCTSVHQARPTGIPSSKPSKKTPTPGGAQFVGLELYKRLKDFLRSY 97
Query: 82 --DVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQ 128
++L ED E +L+ + +QWE+ + L YL+R +VR +
Sbjct: 98 LTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLDGICAYLNRHWVRRE 146
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 186/555 (33%), Positives = 299/555 (53%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE+Q + + Y + + PEY+ + L++E DR + Y +
Sbjct: 434 DLQIYQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 493
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G +L+ + + DLS +++L+ R G++ +
Sbjct: 494 QKSLIASVEKQLLGEHLTAILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 550
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + CF ++ F+ A+
Sbjct: 551 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDTCFLKNEKFINAM 601
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + KD
Sbjct: 602 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKD 658
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 659 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 718
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ N N +L+V +LT G WP+Y ++LP EMVK E FK FY K RK
Sbjct: 719 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRK 777
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+C + +F+ EL VS +Q L++FN+ + S EI + G+L R
Sbjct: 778 LQWQSTLGHCVLKAEFKEGKKELQVSLFQTMVLLMFNEGEEFSLEEIKHATGIEDGELRR 837
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K I D F N F ++ RI+I V+++ E
Sbjct: 838 TLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTE 897
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK L + L+SE L KP +K RI+ LI+R++
Sbjct: 898 RVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDY 955
Query: 726 IERDSKDPTMFNYSA 740
+ERD ++P +NY A
Sbjct: 956 MERDKENPNQYNYIA 970
Score = 282 (104.3 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 74/290 (25%), Positives = 144/290 (49%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFM-LREFVK 101
LY V +LCS ++ S LY + ++ E+H+++ + ED + L++ +
Sbjct: 297 LYQAVENLCSHKI--------SANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDR 348
Query: 102 QWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVR--DTV 158
W+N + ++R F +LDR YV + L S+ ++ + +FR + D K + D +
Sbjct: 349 CWQN-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQTKTIDGI 407
Query: 159 IALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWI 218
+ LI+ ER GE IDR+L++ + + + D+ Y+ FE+Q + + Y + +
Sbjct: 408 LLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQQFLQETNRLYAAEGQKLM 462
Query: 219 LNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCR 278
PEY+ + L++E DR + Y ++ LI V+ +LL H +L+ G
Sbjct: 463 QEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIASVEKQLLGEHLTAILQK---GLN 519
Query: 279 ALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
+L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 520 SLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKD 569
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 186/555 (33%), Positives = 300/555 (54%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE++ +++ Y + + PEY+ + L++E DR + Y +
Sbjct: 446 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 505
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DLS +++L+ R G++ +
Sbjct: 506 QKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 562
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + ICF ++ F+ A+
Sbjct: 563 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDICFLKNEKFINAM 613
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + KD
Sbjct: 614 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKD 670
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 671 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 730
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ N N +L+V +LT G WP+Y ++LP EMVK E FK FY K RK
Sbjct: 731 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRK 789
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+C + +F+ EL VS +Q L++FN+ + S EI + G+L R
Sbjct: 790 LQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRR 849
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K I D F N F ++ RI+I V+++ E
Sbjct: 850 TLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTE 909
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK L + L+SE L KP +K RI+ LI+R++
Sbjct: 910 RVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDY 967
Query: 726 IERDSKDPTMFNYSA 740
+ERD ++P +NY A
Sbjct: 968 MERDKENPNQYNYIA 982
Score = 281 (104.0 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 76/299 (25%), Positives = 146/299 (48%)
Query: 36 ASEECMTLYTIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFEDKRGE 93
A E +I Y+L + CSY S LY + ++ E+H+++ + ED
Sbjct: 292 AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDS 351
Query: 94 FM-LREFVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLK 151
+ L++ K W+N + ++R F +LDR YV + L S+ ++ + +FR + D K
Sbjct: 352 VLFLKKIDKCWQN-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQK 410
Query: 152 RDVR--DTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCY 209
+ D ++ LI+ ER GE IDR+L++ + + + D+ Y+ FE++ +++
Sbjct: 411 VQNKTIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRL 465
Query: 210 YLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQL 269
Y + + PEY+ + L++E DR + Y ++ LI V+ +LL H +
Sbjct: 466 YAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAI 525
Query: 270 LENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ G L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 526 LQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKD 581
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 186/555 (33%), Positives = 300/555 (54%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE++ +++ Y + + PEY+ + L++E DR + Y +
Sbjct: 364 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 423
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DLS +++L+ R G++ +
Sbjct: 424 QKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 480
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + ICF ++ F+ A+
Sbjct: 481 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDICFLKNEKFINAM 531
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + KD
Sbjct: 532 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKD 588
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 589 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 648
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ N N +L+V +LT G WP+Y ++LP EMVK E FK FY K RK
Sbjct: 649 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRK 707
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+C + +F+ EL VS +Q L++FN+ + S EI + G+L R
Sbjct: 708 LQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRR 767
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K I D F N F ++ RI+I V+++ E
Sbjct: 768 TLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTE 827
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK L + L+SE L KP +K RI+ LI+R++
Sbjct: 828 RVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDY 885
Query: 726 IERDSKDPTMFNYSA 740
+ERD ++P +NY A
Sbjct: 886 MERDKENPNQYNYIA 900
Score = 278 (102.9 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 75/299 (25%), Positives = 146/299 (48%)
Query: 36 ASEECMTLYTIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFEDKRGE 93
A E +I Y+L + CSY S LY + ++ E+H+++ + ED
Sbjct: 210 AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDS 269
Query: 94 FM-LREFVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLK 151
+ L++ + W+N + ++R F +LDR YV + L S+ ++ + +FR + D K
Sbjct: 270 VLFLKKIDRCWQN-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQK 328
Query: 152 RDVR--DTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCY 209
+ D ++ LI+ ER GE IDR+L++ + + + D+ Y+ FE++ +++
Sbjct: 329 VQNKTIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRL 383
Query: 210 YLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQL 269
Y + + PEY+ + L++E DR + Y ++ LI V+ +LL H +
Sbjct: 384 YAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAI 443
Query: 270 LENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ G L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 444 LQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKD 499
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 186/555 (33%), Positives = 300/555 (54%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE++ +++ Y + + PEY+ + L++E DR + Y +
Sbjct: 377 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 436
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DLS +++L+ R G++ +
Sbjct: 437 QKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 493
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + ICF ++ F+ A+
Sbjct: 494 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDICFLKNEKFINAM 544
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + KD
Sbjct: 545 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKD 601
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 602 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 661
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ N N +L+V +LT G WP+Y ++LP EMVK E FK FY K RK
Sbjct: 662 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRK 720
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+C + +F+ EL VS +Q L++FN+ + S EI + G+L R
Sbjct: 721 LQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRR 780
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K I D F N F ++ RI+I V+++ E
Sbjct: 781 TLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTE 840
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK L + L+SE L KP +K RI+ LI+R++
Sbjct: 841 RVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDY 898
Query: 726 IERDSKDPTMFNYSA 740
+ERD ++P +NY A
Sbjct: 899 MERDKENPNQYNYIA 913
Score = 278 (102.9 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 75/299 (25%), Positives = 146/299 (48%)
Query: 36 ASEECMTLYTIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFEDKRGE 93
A E +I Y+L + CSY S LY + ++ E+H+++ + ED
Sbjct: 223 AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDS 282
Query: 94 FM-LREFVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLK 151
+ L++ + W+N + ++R F +LDR YV + L S+ ++ + +FR + D K
Sbjct: 283 VLFLKKIDRCWQN-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQK 341
Query: 152 RDVR--DTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCY 209
+ D ++ LI+ ER GE IDR+L++ + + + D+ Y+ FE++ +++
Sbjct: 342 VQNKTIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRL 396
Query: 210 YLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQL 269
Y + + PEY+ + L++E DR + Y ++ LI V+ +LL H +
Sbjct: 397 YAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAI 456
Query: 270 LENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ G L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 457 LQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKD 512
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 186/555 (33%), Positives = 300/555 (54%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE++ +++ Y + + PEY+ + L++E DR + Y +
Sbjct: 429 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 488
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DLS +++L+ R G++ +
Sbjct: 489 QKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 545
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + ICF ++ F+ A+
Sbjct: 546 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDICFLKNEKFINAM 596
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + KD
Sbjct: 597 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKD 653
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 654 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 713
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ N N +L+V +LT G WP+Y ++LP EMVK E FK FY K RK
Sbjct: 714 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRK 772
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+C + +F+ EL VS +Q L++FN+ + S EI + G+L R
Sbjct: 773 LQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRR 832
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K I D F N F ++ RI+I V+++ E
Sbjct: 833 TLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTE 892
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK L + L+SE L KP +K RI+ LI+R++
Sbjct: 893 RVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDY 950
Query: 726 IERDSKDPTMFNYSA 740
+ERD ++P +NY A
Sbjct: 951 MERDKENPNQYNYIA 965
Score = 269 (99.8 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 74/299 (24%), Positives = 145/299 (48%)
Query: 36 ASEECMTLYTIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFEDKRGE 93
A E +I Y+L + CSY S LY + ++ E+H+++ + E
Sbjct: 275 AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREYSLDS 334
Query: 94 FM-LREFVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLK 151
+ L++ + W+N + ++R F +LDR YV + L S+ ++ + +FR + D K
Sbjct: 335 VLFLKKIDRCWQN-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQK 393
Query: 152 RDVR--DTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCY 209
+ D ++ LI+ ER GE IDR+L++ + + + D+ Y+ FE++ +++
Sbjct: 394 VQNKTIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRL 448
Query: 210 YLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQL 269
Y + + PEY+ + L++E DR + Y ++ LI V+ +LL H +
Sbjct: 449 YAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAI 508
Query: 270 LENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ G L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 509 LQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKD 564
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 791 (283.5 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 210/709 (29%), Positives = 369/709 (52%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 88 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 146
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +RD +++ L + V + V+ LI++ER GE I+ L+ V
Sbjct: 147 RECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQ 206
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 207 SYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 266
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 267 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 322
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L + GL + + + + +QG A + + E N Q +L++H K+
Sbjct: 323 YNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQT----VLDVHKKYN 378
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEKL 406
A V F + F+ AL +A F N + V S E+LA +CD+L K S ++
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKNP 437
Query: 407 SDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSG 466
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ G
Sbjct: 438 EEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACG 497
Query: 467 GHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFGL 524
+T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 498 FEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTF 553
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTYQ 578
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A ST+Q
Sbjct: 554 ALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQA-----STFQ 607
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSDS 636
A L+ +N D + ++ + L +VL L SK +L E N + + D+
Sbjct: 608 MAILLQYNTEDAYAVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDT 667
Query: 637 F-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLGY 691
+ + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKVL +
Sbjct: 668 LIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKH 727
Query: 692 QQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
QQL+ E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 728 QQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 40 (19.1 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 791 (283.5 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 210/709 (29%), Positives = 369/709 (52%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 88 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 146
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +RD +++ L + V + V+ LI++ER GE I+ L+ V
Sbjct: 147 RECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQ 206
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 207 SYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 266
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 267 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 322
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L + GL + + + + +QG A + + E N Q +L++H K+
Sbjct: 323 YNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQT----VLDVHKKYN 378
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEKL 406
A V F + F+ AL +A F N + V S E+LA +CD+L K S ++
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKNP 437
Query: 407 SDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSG 466
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ G
Sbjct: 438 EEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACG 497
Query: 467 GHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFGL 524
+T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 498 FEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTF 553
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTYQ 578
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A ST+Q
Sbjct: 554 ALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQA-----STFQ 607
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSDS 636
A L+ +N D + ++ + L +VL L SK +L E N + + D+
Sbjct: 608 MAILLQYNTEDAYAVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDT 667
Query: 637 F-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLGY 691
+ + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKVL +
Sbjct: 668 LIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKH 727
Query: 692 QQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
QQL+ E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 728 QQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 40 (19.1 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 791 (283.5 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 210/709 (29%), Positives = 369/709 (52%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 88 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 146
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +RD +++ L + V + V+ LI++ER GE I+ L+ V
Sbjct: 147 RECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQ 206
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 207 SYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 266
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 267 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 322
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L + GL + + + + +QG A + + E N Q +L++H K+
Sbjct: 323 YNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQT----VLDVHKKYN 378
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEKL 406
A V F + F+ AL +A F N + V S E+LA +CD+L K S ++
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKNP 437
Query: 407 SDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSG 466
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ G
Sbjct: 438 EEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACG 497
Query: 467 GHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFGL 524
+T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 498 FEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTF 553
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTYQ 578
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A ST+Q
Sbjct: 554 ALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQA-----STFQ 607
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSDS 636
A L+ +N D + ++ + L +VL L SK +L E N + + D+
Sbjct: 608 MAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDT 667
Query: 637 F-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLGY 691
+ + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKVL +
Sbjct: 668 LIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKH 727
Query: 692 QQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
QQL+ E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 728 QQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 40 (19.1 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 791 (283.5 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 210/709 (29%), Positives = 369/709 (52%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 88 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 146
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +RD +++ L + V + V+ LI++ER GE I+ L+ V
Sbjct: 147 RECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQ 206
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 207 SYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 266
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 267 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 322
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L + GL + + + + +QG A + + E N Q +L++H K+
Sbjct: 323 YNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQT----VLDVHKKYN 378
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEKL 406
A V F + F+ AL +A F N + V S E+LA +CD+L K S ++
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKNP 437
Query: 407 SDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSG 466
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ G
Sbjct: 438 EEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACG 497
Query: 467 GHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFGL 524
+T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 498 FEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTF 553
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTYQ 578
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A ST+Q
Sbjct: 554 ALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQA-----STFQ 607
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSDS 636
A L+ +N D + ++ + L +VL L SK +L E N + + D+
Sbjct: 608 MAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDT 667
Query: 637 F-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLGY 691
+ + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKVL +
Sbjct: 668 LIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKH 727
Query: 692 QQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
QQL+ E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 728 QQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 40 (19.1 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 791 (283.5 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 210/709 (29%), Positives = 369/709 (52%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 88 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 146
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +RD +++ L + V + V+ LI++ER GE I+ L+ V
Sbjct: 147 RECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQ 206
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 207 SYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 266
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 267 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 322
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L + GL + + + + +QG A + + E N Q +L++H K+
Sbjct: 323 YNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQT----VLDVHKKYN 378
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEKL 406
A V F + F+ AL +A F N + V S E+LA +CD+L K S ++
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKNP 437
Query: 407 SDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSG 466
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ G
Sbjct: 438 EEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACG 497
Query: 467 GHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFGL 524
+T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 498 FEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTF 553
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTYQ 578
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A ST+Q
Sbjct: 554 ALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQA-----STFQ 607
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSDS 636
A L+ +N D + ++ + L +VL L SK +L E N + + D+
Sbjct: 608 MAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDT 667
Query: 637 F-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLGY 691
+ + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKVL +
Sbjct: 668 LIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKH 727
Query: 692 QQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
QQL+ E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 728 QQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 40 (19.1 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 791 (283.5 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 210/709 (29%), Positives = 369/709 (52%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 88 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 146
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +RD +++ L + V + V+ LI++ER GE I+ L+ V
Sbjct: 147 RECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQ 206
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 207 SYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 266
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 267 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 322
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L + GL + + + + +QG A + + E N Q +L++H K+
Sbjct: 323 YNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQT----VLDVHKKYN 378
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEKL 406
A V F + F+ AL +A F N + V S E+LA +CD+L K S ++
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKNP 437
Query: 407 SDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSG 466
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ G
Sbjct: 438 EEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACG 497
Query: 467 GHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFGL 524
+T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 498 FEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTF 553
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTYQ 578
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A ST+Q
Sbjct: 554 ALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQA-----STFQ 607
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSDS 636
A L+ +N D + ++ + L +VL L SK +L E N + + D+
Sbjct: 608 MAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDT 667
Query: 637 F-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLGY 691
+ + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKVL +
Sbjct: 668 LIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKH 727
Query: 692 QQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
QQL+ E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 728 QQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 40 (19.1 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 179/555 (32%), Positives = 301/555 (54%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y++ FE++ +++ C Y + + PEY+ + L++E DR + Y +
Sbjct: 205 DLQVYKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEEGDRVITYLDHST 264
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DL++ ++L+ + G + +
Sbjct: 265 QKPLIACVEKQLLGEHLTAILQK---GLDNLLDENRISDLTQTYQLFSRVKGGQQILLQH 321
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y + G +V E+D +++V ++L+ DK + +CF ++ F+ +
Sbjct: 322 WSEYIKNFGTTIVVNPEKD---------KDMVQELLDFKDKVDHIIEVCFQKNEKFINLM 372
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KE+FE F N+ AE++A + D+ + + E +DE +ER +DK++++ + KD
Sbjct: 373 KESFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELERILDKIMIIFRFIHGKD 429
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 430 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQ 489
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ N ++ DL+V +LT G WP+Y ++L SEM+K E FK FY K RK
Sbjct: 490 FKQYMQ-NQSDPGNIDLTVNILTMGYWPTYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRK 548
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+ + +F+ E VS +Q L++FN+ D SF EI + +L R
Sbjct: 549 LQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDEFSFEEIKMATGIEDSELRR 608
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K + D F FN F ++ RI+I V+++ E
Sbjct: 609 TLQSLACGKARVLIKNPKGKDVEDGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTTE 668
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK LG+ L+SE L KP +K RI+ LI+R++
Sbjct: 669 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 726
Query: 726 IERDSKDPTMFNYSA 740
+ERD +P ++Y A
Sbjct: 727 MERDKDNPNQYHYVA 741
Score = 272 (100.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 72/292 (24%), Positives = 147/292 (50%)
Query: 45 TIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLP--SFEDKRGEFM-LREF 99
+I Y+L + CSY S LY + +V E+H+++ +L D + L++
Sbjct: 58 SIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEDHVKAQILQFRCCTDSLDSLLFLKKI 117
Query: 100 VKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRD 156
K W++ + ++R F +LDR YV + L S+ ++ + +FR+ V D ++ D
Sbjct: 118 NKCWQD-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHVISDKQVQNKTID 176
Query: 157 TVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASS 216
++ LI+ ER GE +DR+L++ + + + D+ Y++ FE++ +++ C Y +
Sbjct: 177 GILLLIERERSGEAVDRSLLRSLLSM-----LSDLQVYKESFEQRFLEETNCLYAAEGQR 231
Query: 217 WILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSG 276
+ PEY+ + L++E DR + Y ++ LI V+ +LL H +L+ G
Sbjct: 232 LMQEREVPEYLHHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK---G 288
Query: 277 CRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ + + DL++ ++L+ + G + + + +Y + G +V E+D
Sbjct: 289 LDNLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGTTIVVNPEKD 340
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 184/560 (32%), Positives = 302/560 (53%)
Query: 186 IGIL-DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
+G+L D+ Y+ FE + +++ C Y + + PEY+ + L++E DR + Y
Sbjct: 218 LGMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITY 277
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
++ LI V+ +LL H +L+ G L+ + + DL+++++L+ R G +
Sbjct: 278 LDHSTQKPLIACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLAQMYQLFSRVRGGQQ 334
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
+ + +Y G A+V E+D +++V +L+ DK + +CF ++
Sbjct: 335 ALLQHWSEYIKTFGTAIVINPEKD---------KDMVQDLLDFKDKVDHVIEVCFQKNER 385
Query: 365 FLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGY 424
F+ +KE+FE F N+ AE++A D+ + + E +DE +ERT+DK+++L +
Sbjct: 386 FVNLMKESFETFINKR--PNKPAELIAKHVDSKLRAGNKEA-TDEELERTLDKIMILFRF 442
Query: 425 FKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLAR 484
KD+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L++
Sbjct: 443 IHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSK 502
Query: 485 ENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTK 544
+ + + P DL+V +LT G WP+Y ++L EM+K E FK FY K
Sbjct: 503 DIMVHFKQHMQNQSDSGP-IDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKAFYLGK 561
Query: 545 TKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNK 604
RKL W +LG+ + +F+ E VS +Q L++FN+ D SF EI +
Sbjct: 562 HSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIED 621
Query: 605 GDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDR 660
+L R L SL+C K ++L K P K + D F FN +F ++ RI+I V+++
Sbjct: 622 SELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQ 681
Query: 661 REINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDL 720
E V +DR++ IDAA+VRIMK RK LG+ L+SE L KP +K RI+ L
Sbjct: 682 VSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESL 739
Query: 721 INREFIERDSKDPTMFNYSA 740
I+R+++ERD +P ++Y A
Sbjct: 740 IDRDYMERDKDNPNQYHYVA 759
Score = 280 (103.6 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 76/291 (26%), Positives = 146/291 (50%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFM-LREFVK 101
LY V +LCS ++ S LY + + E+H+Q+ +LP ED + L++
Sbjct: 86 LYQAVENLCSHKV--------SPMLYKQLRQACEDHVQAQILPFREDSLDSVLFLKKINT 137
Query: 102 QWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRDTV 158
W++ + ++R F +LDR YV + L S+ ++ + +FR + D ++ D +
Sbjct: 138 CWQD-HCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRTHIISDKMVQSKTIDGI 196
Query: 159 IALIDEEREGEKIDRALVKKAVDIFVGIGIL-DMDFYRQDFEEQMIDDAGCYYLRKASSW 217
+ LI+ ER GE +DR+L++ +G+L D+ Y+ FE + +++ C Y +
Sbjct: 197 LLLIERERSGEAVDRSLLRSL------LGMLSDLQVYKDSFELKFLEETNCLYAAEGQRL 250
Query: 218 ILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGC 277
+ PEY+ + L++E DR + Y ++ LI V+ +LL H +L+ G
Sbjct: 251 MQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK---GL 307
Query: 278 RALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ + + DL+++++L+ R G + + + +Y G A+V E+D
Sbjct: 308 DHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEYIKTFGTAIVINPEKD 358
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 779 (279.3 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 210/709 (29%), Positives = 371/709 (52%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 89 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 147
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G + + +V +R+ +++ L + V + V+ LI++ER GE I+ L+ V
Sbjct: 148 RECDEGRKGTYEIYSLALVTWRECLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQ 207
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 208 SYVELGLNEDDAFAKGPTLSVYKEYFETQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 267
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 268 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 323
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L GL + + + + +QG A + + E N Q IL++H K+
Sbjct: 324 YNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGESALNDPKMYVQT----ILDVHKKYN 379
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCNES----IVEISSA--EILATFCDNLFKNSDAEKL 406
A V F + F+ AL +A F N + +V+ SS E+LA +CD+L K S ++
Sbjct: 380 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMVQSSSKSPELLARYCDSLLKKS-SKNP 438
Query: 407 SDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSG 466
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ G
Sbjct: 439 EEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACG 498
Query: 467 GHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFGL 524
+T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 499 FEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTF 554
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTYQ 578
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A ST+Q
Sbjct: 555 ALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKN-RYTLQA-----STFQ 608
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSDS 636
A L+ +N D + ++ + L++VL L SK +L E N + + D+
Sbjct: 609 MAILLQYNTEDVYTVQQLTDSTQIKIDILVQVLQILLKSKLLVLEDENANVDEVEFKPDT 668
Query: 637 F-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLGY 691
+ + ++ R+ I +P ++++ E ++ +DR+ I AA+VR MK RKVL +
Sbjct: 669 LIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRTMKMRKVLKH 728
Query: 692 QQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
QQL++E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 729 QQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 777
Score = 40 (19.1 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 182/555 (32%), Positives = 294/555 (52%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE + +++ C Y + + + PEY+ + L++E DR + Y +
Sbjct: 223 DLQVYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHST 282
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DL+++++L+ + G +
Sbjct: 283 QKPLIACVEKQLLGEHLTAILQK---GLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQH 339
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D +++V +L+ DK V +CF ++ F+ +
Sbjct: 340 WSEYIKTFGTTIVINPEKD---------KDMVQDLLDFKDKVDHVVEVCFQRNERFINLM 390
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KE+FE F N+ AE++A D+ + + E +DE +ER +DK+++L + KD
Sbjct: 391 KESFETFINKR--PNKPAELIAKHVDSKLRAGNKEA-TDEELERILDKIMILFRFIHGKD 447
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 448 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVH 507
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ P DL+V +LT G WP+Y ++LP EMV+ E FK FY K RK
Sbjct: 508 FKQHMQNQSAPGP-IDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRK 566
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+ + F+ E VS +Q L++FN+ D SF EI + +L R
Sbjct: 567 LQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRR 626
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K + D F FNA F ++ RI+I V+++ E
Sbjct: 627 TLQSLACGKARVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTE 686
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK LG+ L+SE L KP +K RI+ LI+R++
Sbjct: 687 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 744
Query: 726 IERDSKDPTMFNYSA 740
+ERD P ++Y A
Sbjct: 745 MERDKDSPNQYHYVA 759
Score = 277 (102.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 73/290 (25%), Positives = 145/290 (50%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFM-LREFVK 101
LY V +LCS ++ S LY + +V E+H+Q+ +LP ED + L++
Sbjct: 86 LYQAVENLCSHKV--------SPTLYKQLRQVCEDHVQAQILPFREDSLDSVLFLKKINT 137
Query: 102 QWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRDTV 158
W++ + ++R F +LDR YV + L S+ ++ + +FR+ + D ++ D +
Sbjct: 138 CWQD-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGI 196
Query: 159 IALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWI 218
+ LI ER GE +DR+L++ + + + D+ Y+ FE + +++ C Y + +
Sbjct: 197 LLLIGRERSGEAVDRSLLRSLLSM-----LSDLQVYKDSFELKFLEETNCLYAAEGQRLM 251
Query: 219 LNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCR 278
+ PEY+ + L++E DR + Y ++ LI V+ +LL H +L+ G
Sbjct: 252 QDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK---GLE 308
Query: 279 ALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ + + DL+++++L+ + G + + +Y G +V E+D
Sbjct: 309 HLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIKTFGTTIVINPEKD 358
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 179/556 (32%), Positives = 300/556 (53%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE++ +++ Y + + PEY+ + L++E DR + Y +
Sbjct: 348 DLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQST 407
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DLS +++L+ R G++ +
Sbjct: 408 QKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQH 464
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + +CF ++ F+ +
Sbjct: 465 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDVCFMKNEKFVNGM 515
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGY-FKYK 428
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + ++ K
Sbjct: 516 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYEGK 572
Query: 429 DLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQT 488
D+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 573 DVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMV 632
Query: 489 ALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKAR 548
N +L+V +LT G WP+Y ++LP+EMV+ E FK FY K R
Sbjct: 633 QFKQHMQCQ-NIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFYLGKHSGR 691
Query: 549 KLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLI 608
KL W +LG+C + +F+ EL VS +Q L++FN+ + S +I + +L
Sbjct: 692 KLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIEDSELR 751
Query: 609 RVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREIN 664
R L SL+C K ++L K P +K + D F N F ++ RI+I V+++
Sbjct: 752 RTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQASTT 811
Query: 665 EDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINRE 724
E V +DR++ IDAA+VRIMK RK L + L+SE L KP +K RI+ LI+R+
Sbjct: 812 ERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRD 869
Query: 725 FIERDSKDPTMFNYSA 740
++ERD ++P +NY A
Sbjct: 870 YMERDKENPNQYNYVA 885
Score = 271 (100.5 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 74/290 (25%), Positives = 145/290 (50%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFM-LREFVK 101
LY V +LCS ++ S +LY + V E+H+++ + ED + L++ K
Sbjct: 211 LYQAVENLCSHKI--------SAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDK 262
Query: 102 QWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVR--DTV 158
W++ + ++R F +LDR YV + L S+ ++ + +FR + DLK + D +
Sbjct: 263 CWQD-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGI 321
Query: 159 IALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWI 218
+ LI+ ER GE +DR+L++ + + + D+ Y+ FE++ +++ Y + +
Sbjct: 322 LLLIERERSGEAVDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRLYAAEGQRLM 376
Query: 219 LNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCR 278
PEY+ + L++E DR + Y ++ LI V+ +LL H +L+ G
Sbjct: 377 QEREVPEYLHHVNKRLEEEADRVITYLDQSTQKSLIATVEKQLLGEHLTAILQK---GLN 433
Query: 279 ALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 434 NLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKD 483
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 182/560 (32%), Positives = 299/560 (53%)
Query: 186 IGIL-DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
+G+L D+ Y+ FE + +++ C Y + + PEY+ + L++E DR + Y
Sbjct: 179 LGMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLDHVSKRLEEEADRVITY 238
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
++ LI V+ +LL H +L+ G L+ + + DL+++++L+ R G +
Sbjct: 239 LDHSTQKPLIACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLTQMYQLFSRVRGGQQ 295
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
+ + Y G +V E+D +++V +L+ D+ + +CF +
Sbjct: 296 ALLQHWSDYIKTFGTTIVINPEKD---------KDMVQDLLDFKDRVDHVIDVCFQRSEK 346
Query: 365 FLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGY 424
F+ +KE+FE F N+ AE++A D+ + + E +DE +ER +DKV++L +
Sbjct: 347 FVNLMKESFETFINKR--PNKPAELIAKHVDSKLRAGNKEA-TDEELERMLDKVMILFRF 403
Query: 425 FKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLAR 484
KD+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L++
Sbjct: 404 IHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSK 463
Query: 485 ENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTK 544
+ + N ++ DL+V +LT G WP+Y ++L EM+K E FK FY K
Sbjct: 464 DIMVHFKQYMQ-NQSDPGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGK 522
Query: 545 TKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNK 604
RKL W +LG+ + +F+ E VS +Q L++FN+ D SF +I +
Sbjct: 523 HSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEDIRMATGIED 582
Query: 605 GDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDR 660
+L R L SL+C K ++L K P K + D F FNA+F ++ RI+I V+++
Sbjct: 583 SELRRTLQSLACGKARVLLKSPKGKEVEDGDKFLFNAEFKHKLFRIKINQIQMKETVEEQ 642
Query: 661 REINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDL 720
E V +DR++ IDAA+VRIMK RK LG+ L+SE L KP +K RI+ L
Sbjct: 643 VSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESL 700
Query: 721 INREFIERDSKDPTMFNYSA 740
I+R+++ERD P ++Y A
Sbjct: 701 IDRDYMERDKDSPNQYHYVA 720
Score = 256 (95.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 73/294 (24%), Positives = 142/294 (48%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVL----PSFEDKRGEFMLRE 98
LY V +LCS ++ S LY + + E H+Q+ +L P + L++
Sbjct: 44 LYQAVENLCSHKV--------SPTLYQQLRQACEGHVQAQILQFRQPCTDSLDSVLFLKK 95
Query: 99 FVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVR 155
W++ + ++R F +LDR YV + L S+ ++ + +FR+ + D ++
Sbjct: 96 MNTCWQD-HCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRNHIISDKMVQTKTI 154
Query: 156 DTVIALIDEEREGEKIDRALVKKAVDIFVGIGIL-DMDFYRQDFEEQMIDDAGCYYLRKA 214
D ++ LI+ ER GE +DR+L++ +G+L D+ Y+ FE + +++ C Y +
Sbjct: 155 DGILLLIERERSGEAVDRSLLRSL------LGMLSDLQVYKDSFELKFLEETNCLYAAEG 208
Query: 215 SSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEK 274
+ PEY+ + L++E DR + Y ++ LI V+ +LL H +L+
Sbjct: 209 QRLMQEREVPEYLDHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK-- 266
Query: 275 SGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
G L+ + + DL+++++L+ R G + + + Y G +V E+D
Sbjct: 267 -GLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSDYIKTFGTTIVINPEKD 319
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 165/366 (45%), Positives = 228/366 (62%)
Query: 1 MASKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQD 60
M+ +++ FEE W+ +++ PEP F EC LYTI+YD+C Q
Sbjct: 6 MSRPRQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMC------VQR 59
Query: 61 CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL 120
YSQ+LY KY +V E++ VLPS +K E MLRE VK+W N +M +WL +FF Y+
Sbjct: 60 SDYSQQLYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYI 119
Query: 121 DRFYVR-SQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKA 179
DR VR S+ + SL EV + F D VY +++ ++ VIALI +EREGE+IDRALVK
Sbjct: 120 DRHLVRRSKIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNV 179
Query: 180 VDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERD 239
+DI+V G+ ++ Y +DFE M+ D YY RKAS W DSCP+YMIK EECLK ER+
Sbjct: 180 LDIYVENGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERE 239
Query: 240 RAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDET 299
R +Y H+ +E KL+EK+Q+ELLV+ LENE SG AL+ +K +DLSRI+RLY
Sbjct: 240 RVTHYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLYLPI 299
Query: 300 RTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICF 359
L VA +FK++ ++G AL+ QA++ KT N ++ELH+KF+ YV CF
Sbjct: 300 PKRLGRVADLFKKHITEEGNALIKQADD----KTTNQ------LLIELHNKFIVYVIECF 349
Query: 360 GDHKLF 365
+H LF
Sbjct: 350 QNHTLF 355
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 181/560 (32%), Positives = 298/560 (53%)
Query: 186 IGIL-DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
+G+L D+ Y+ FE + +++ C Y + + PEY+ + L++E DR + Y
Sbjct: 220 LGMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITY 279
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
++ LI V+ +LL H +L+ G L+ + + DL+++++L+ R G +
Sbjct: 280 LDHSTQKPLIACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLTQMYQLFSRVRGGQQ 336
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
+ + +Y G +V E+D +++V +L+ D+ + +CF ++
Sbjct: 337 ALLQHWSEYIKTFGTTIVINPEKD---------KDMVQDLLDFKDRVDHVIDVCFQRNEK 387
Query: 365 FLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGY 424
F+ +KE+FE F N+ AE++A D+ + + E +DE +ER +DKV+++ +
Sbjct: 388 FINLMKESFEAFINKR--PNKPAELIAKHVDSKLRAGNKEA-TDEELERILDKVMIIFRF 444
Query: 425 FKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLAR 484
KD+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L++
Sbjct: 445 IHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSK 504
Query: 485 ENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTK 544
+ + N ++ DL+V +LT G WP+Y ++L EMVK E FK FY K
Sbjct: 505 DIMVHFKQYMQ-NQSDPGSIDLTVNILTMGYWPTYTPMDVHLTPEMVKLQEVFKTFYLGK 563
Query: 545 TKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNK 604
RKL W +LG+ + +F+ E VS +Q L++FN+ D F EI +
Sbjct: 564 HSGRKLQWQTALGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFGFEEIKAATGIED 623
Query: 605 GDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDR 660
+L R L SL+C K ++L K P K + D F FN F ++ RI+I V+++
Sbjct: 624 SELRRTLQSLACGKARVLIKSPKGKEVEDGDKFFFNGDFKHKLFRIKINQIQMKETVEEQ 683
Query: 661 REINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDL 720
E V +DR++ IDAA+VRIMK RK LG+ L+SE L KP +K RI+ L
Sbjct: 684 VSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESL 741
Query: 721 INREFIERDSKDPTMFNYSA 740
I+R+++ERD P ++Y A
Sbjct: 742 IDRDYMERDKDSPNQYHYVA 761
Score = 259 (96.2 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 75/291 (25%), Positives = 141/291 (48%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGE-FMLREFVK 101
LY V +LCS ++ + LY + E E H+Q+ +L D F L++
Sbjct: 88 LYQAVENLCSHKV--------APTLYQQLREACESHVQAQILQVCTDSLDSVFFLKKINT 139
Query: 102 QWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRDTV 158
W++ + ++R F +LDR YV + L S+ ++ + +FR V D ++ D +
Sbjct: 140 CWQD-HCRQMIMVRSIFLFLDRTYVLQNSLLPSIWDMGLELFRSHVISDRMVQTKTIDGI 198
Query: 159 IALIDEEREGEKIDRALVKKAVDIFVGIGIL-DMDFYRQDFEEQMIDDAGCYYLRKASSW 217
+ LI ER GE +DR+L++ +G+L D+ Y+ FE + +++ C Y +
Sbjct: 199 LLLIARERSGEAVDRSLLRGL------LGMLSDLQVYKDSFELKFLEETNCLYAAEGQRL 252
Query: 218 ILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGC 277
+ PEY+ + L++E DR + Y ++ LI V+ +LL H +L+ G
Sbjct: 253 MQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK---GL 309
Query: 278 RALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ + + DL+++++L+ R G + + + +Y G +V E+D
Sbjct: 310 DHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSEYIKTFGTTIVINPEKD 360
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 178/555 (32%), Positives = 297/555 (53%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE + +++ C Y + + PEY+ + L++E DR + Y +
Sbjct: 225 DLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHST 284
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L G L+ + + DL+++++L+ + G + +
Sbjct: 285 QKPLIACVEKQLLGEHLTAILHK---GLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQH 341
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D +++V +L+ D+ + +CF ++ F+ +
Sbjct: 342 WSEYIKTFGTTIVINPEKD---------KDMVQDLLDFKDRVDHVIEVCFQRNEKFINLM 392
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KE+FE F N+ AE++A D+ + + E +DE +ER +DKV+++ + KD
Sbjct: 393 KESFETFINKR--PNKPAELIAKHVDSKLRAGNKEA-TDEELERILDKVMIIFRFIHGKD 449
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L+++
Sbjct: 450 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQ 509
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARK 549
+ N ++ DL+V +LT G WP+Y ++L EM+K E FK FY K RK
Sbjct: 510 FKQYMQ-NQSDPGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRK 568
Query: 550 LTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
L W +LG+ + +F+ E VS +Q L++FN+ D SF EI + +L R
Sbjct: 569 LQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRR 628
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINE 665
L SL+C K ++L K P K + D+F FN +F ++ RI+I V+++ E
Sbjct: 629 TLQSLACGKARVLVKSPKGKEVEDGDTFMFNGEFKHKLFRIKINQIQMKETVEEQVSTTE 688
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V +DR++ IDAA+VRIMK RK LG+ L+SE L KP +K RI+ LI+R++
Sbjct: 689 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 746
Query: 726 IERDSKDPTMFNYSA 740
+ERD +P ++Y A
Sbjct: 747 MERDKDNPNQYHYVA 761
Score = 264 (98.0 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 72/290 (24%), Positives = 144/290 (49%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFM-LREFVK 101
LY V +LCS ++ S LY + +V E+H+Q+ +L ED + L++
Sbjct: 88 LYQAVENLCSHKV--------SPTLYKQLRQVCEDHVQAQILQFREDSLDSVLFLKKINT 139
Query: 102 QWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRDTV 158
W++ + ++R F +LDR YV + L S+ ++ + +FR+ + D ++ D +
Sbjct: 140 CWQD-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDKMVQSKSIDGI 198
Query: 159 IALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWI 218
+ LI+ ER GE +DR+L++ + + + D+ Y+ FE + +++ C Y + +
Sbjct: 199 LLLIERERNGEAVDRSLLRSLLSM-----LSDLQVYKDSFELKFLEETNCLYAAEGQRLM 253
Query: 219 LNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCR 278
PEY+ + L++E DR + Y ++ LI V+ +LL H +L G
Sbjct: 254 QEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILHK---GLD 310
Query: 279 ALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ + + DL+++++L+ + G + + + +Y G +V E+D
Sbjct: 311 HLLDENRVPDLTQMYQLFSRVKGGQQILLQHWSEYIKTFGTTIVINPEKD 360
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 762 (273.3 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 209/712 (29%), Positives = 368/712 (51%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 88 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 146
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +RD +++ L + V + V+ LI++ER GE I+ L+ V
Sbjct: 147 RECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQ 206
Query: 182 IFVGIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
+V +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 207 SYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEA 266
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRI 292
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R+
Sbjct: 267 RLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRM 322
Query: 293 FRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
+ L + GL + + + + +QG A + + E N Q +L++H K+
Sbjct: 323 YNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQT----VLDVHKKYN 378
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEKL 406
A V F + F+ AL +A F N + V S E+LA +CD+L K S ++
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKNP 437
Query: 407 SDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLS-KLKQHS 465
+ +E T+++V+V+ Y + KD+F +FY K LA+ L+ + D + + +S KLKQ
Sbjct: 438 EEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAK-LVHQNSASDDAEASMISNKLKQAC 496
Query: 466 GGHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP---QFDLSVMVLTTGSWPSYKF 521
G +T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 497 GFEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDSPVDFSIQVLSSGSWPFQQS 552
Query: 522 FGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVS 575
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A S
Sbjct: 553 CTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQA-----S 606
Query: 576 TYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-Q 633
T+Q A L+ +N D + ++ + L +VL L SK +L E N + +
Sbjct: 607 TFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELK 666
Query: 634 SDSF-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKV 688
D+ + + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKV
Sbjct: 667 PDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKV 726
Query: 689 LGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
L +QQL+ E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 727 LKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 778
Score = 40 (19.1 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 546 (197.3 bits), Expect = 1.4e-77, Sum P(2) = 1.4e-77
Identities = 138/514 (26%), Positives = 247/514 (48%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ +RLY +V ++HM S + E L + W + V + Y+DR
Sbjct: 66 HGERLYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDR 125
Query: 123 FYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV + + + + +R + + + +RD ++ LI +R+ +I+ +K A
Sbjct: 126 IYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNAC 185
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWIL--NDSCPEYMIKAEECLKKER 238
D+ + +GI Y +FE ++ + YY +W+ ND+C Y+ + E + E
Sbjct: 186 DMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEA 244
Query: 239 DRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLY-- 296
RA Y +E+K+++ + ++ H ++ + G + ++ +K +DL+RIFR++
Sbjct: 245 SRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKR 304
Query: 297 --DETRT---GLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKF 351
D GL+ + +Y + G +V E+ ++N N V ++L+L D F
Sbjct: 305 IGDSVTVPGGGLKALLKAVSEYLNETGSNIVKN-EDLLKNPV-----NFVNELLQLKDYF 358
Query: 352 MAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETV 411
+ ++ F D + F + FE F N + S E +A + D++ + S + +SD +
Sbjct: 359 SSLLTTAFADDRDFKNRFQHDFETFLNSNR---QSPEFVALYMDDMLR-SGLKCVSDAEM 414
Query: 412 ERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTT 471
+ +D V++L Y + KD+F +++++ LA+RLL DK + D +K L+KLK G FT
Sbjct: 415 DNKLDNVMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQ 474
Query: 472 KMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMV 531
K+E M D L T+ DW + K D+S+ VLT G WP+ + + LP E+
Sbjct: 475 KLENMFRDKELWLTLATSFRDWREAQPT-KMSIDISLRVLTAGVWPTVQCNPVVLPQELS 533
Query: 532 KGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKF 565
E F ++Y K RKLT LGN V F
Sbjct: 534 VAYEMFTQYYTEKHTGRKLTINTLLGNADVKATF 567
Score = 254 (94.5 bits), Expect = 1.4e-77, Sum P(2) = 1.4e-77
Identities = 62/177 (35%), Positives = 96/177 (54%)
Query: 572 LIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKIL-NKEPNT 628
L V+T+Q L+ FN +R+S +++ +L + + +L R L SL+ K +IL K
Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGK 660
Query: 629 KTISQSDSFEFNAKFTDRMRRIRIPLPP--VDDRREINED---VGKDRRHNIDAALVRIM 683
I SD F N F ++ R+++ + V+ EI E V DR+ ++AA+VRIM
Sbjct: 661 DAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIM 720
Query: 684 KSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K+RK L + L++E + L H F P IK RI+ LI RE++ RD D + Y A
Sbjct: 721 KARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 546 (197.3 bits), Expect = 1.4e-77, Sum P(2) = 1.4e-77
Identities = 138/514 (26%), Positives = 247/514 (48%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ +RLY +V ++HM S + E L + W + V + Y+DR
Sbjct: 66 HGERLYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDR 125
Query: 123 FYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV + + + + +R + + + +RD ++ LI +R+ +I+ +K A
Sbjct: 126 IYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNAC 185
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWIL--NDSCPEYMIKAEECLKKER 238
D+ + +GI Y +FE ++ + YY +W+ ND+C Y+ + E + E
Sbjct: 186 DMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEA 244
Query: 239 DRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLY-- 296
RA Y +E+K+++ + ++ H ++ + G + ++ +K +DL+RIFR++
Sbjct: 245 SRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKR 304
Query: 297 --DETRT---GLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKF 351
D GL+ + +Y + G +V E+ ++N N V ++L+L D F
Sbjct: 305 IGDSVTVPGGGLKALLKAVSEYLNETGSNIVKN-EDLLKNPV-----NFVNELLQLKDYF 358
Query: 352 MAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETV 411
+ ++ F D + F + FE F N + S E +A + D++ + S + +SD +
Sbjct: 359 SSLLTTAFADDRDFKNRFQHDFETFLNSNR---QSPEFVALYMDDMLR-SGLKCVSDAEM 414
Query: 412 ERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTT 471
+ +D V++L Y + KD+F +++++ LA+RLL DK + D +K L+KLK G FT
Sbjct: 415 DNKLDNVMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQ 474
Query: 472 KMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMV 531
K+E M D L T+ DW + K D+S+ VLT G WP+ + + LP E+
Sbjct: 475 KLENMFRDKELWLTLATSFRDWREAQPT-KMSIDISLRVLTAGVWPTVQCNPVVLPQELS 533
Query: 532 KGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKF 565
E F ++Y K RKLT LGN V F
Sbjct: 534 VAYEMFTQYYTEKHTGRKLTINTLLGNADVKATF 567
Score = 254 (94.5 bits), Expect = 1.4e-77, Sum P(2) = 1.4e-77
Identities = 62/177 (35%), Positives = 96/177 (54%)
Query: 572 LIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKIL-NKEPNT 628
L V+T+Q L+ FN +R+S +++ +L + + +L R L SL+ K +IL K
Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGK 660
Query: 629 KTISQSDSFEFNAKFTDRMRRIRIPLPP--VDDRREINED---VGKDRRHNIDAALVRIM 683
I SD F N F ++ R+++ + V+ EI E V DR+ ++AA+VRIM
Sbjct: 661 DAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIM 720
Query: 684 KSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K+RK L + L++E + L H F P IK RI+ LI RE++ RD D + Y A
Sbjct: 721 KARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 736 (264.1 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 202/710 (28%), Positives = 366/710 (51%)
Query: 67 LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR 126
LY + E + ++ +++L ED E +L+ + +QWE+ + L YL+R +VR
Sbjct: 88 LYKRLKEFLKNYL-TNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVR 146
Query: 127 SQA-----GLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD 181
+ G+ + + +V +RD +++ L + V++ + ++++ ++ L+ +
Sbjct: 147 RECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVQNKCLLKKKKKKKAMRMLSQLITFILL 206
Query: 182 IFV-GIGILDMD-F--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAE 231
+FV +G+ + D F Y++ FE Q + D +Y R+++ ++ + EYM KAE
Sbjct: 207 VFVVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAE 266
Query: 232 ECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSR 291
L +E+ R Y H ++ +L K + L+ H LE + + L+ +K +DL R
Sbjct: 267 ARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGR 322
Query: 292 IFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKF 351
++ L + GL + + + + +QG A + + E N Q +L++H K+
Sbjct: 323 MYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQT----VLDVHKKY 378
Query: 352 MAYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLFKNSDAEK 405
A V F + F+ AL +A F N + V S E+LA +CD+L K S ++
Sbjct: 379 NALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKN 437
Query: 406 LSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS 465
+ +E T+++V+V+ Y + KD+F +FY K LA+RL+ + D + + +SKLKQ
Sbjct: 438 PEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQAC 497
Query: 466 GGHFTTKMEGMITDVVLARENQTALDDWFSSNL-NEKP-QFDLSVMVLTTGSWPSYKFFG 523
G +T+K++ M D+ ++++ L++ F +L N +P D S+ VL++GSWP +
Sbjct: 498 GFEYTSKLQRMFQDIGVSKD----LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCT 553
Query: 524 LNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG------NCHVNGKFELKAIELIVSTY 577
LPSE+ + + F FY ++ RKLTW+Y L NC N ++ L+A ST+
Sbjct: 554 FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN-RYTLQA-----STF 607
Query: 578 QAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKE-PNTKTIS-QSD 635
Q A L+ +N D + ++ + L +VL L SK +L E N + + D
Sbjct: 608 QMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPD 667
Query: 636 SF-EFNAKFTDRMRRIRIPLPPVDDRREINE----DVGKDRRHNIDAALVRIMKSRKVLG 690
+ + + ++ R+ I +P ++++ E ++ +DR+ I AA+VRIMK RKVL
Sbjct: 668 TLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLK 727
Query: 691 YQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
+QQL+ E + LS FKP + IK ID LI +E++ER + ++Y A
Sbjct: 728 HQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 777
Score = 40 (19.1 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 36 ASEECMTLYTIVYDLCS 52
A M LYT VY+ C+
Sbjct: 38 AKSRYMELYTHVYNYCT 54
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 184/556 (33%), Positives = 292/556 (52%)
Query: 191 MDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSE 250
+ Y + FE+ ++ +Y + ++ PEY+ E L +E +R + Y +
Sbjct: 257 LGIYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEENERCILYIDAVTR 316
Query: 251 SKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIF 310
LI V+ +LL R+ L+ EK G L+ + +DL R+ L+ LE +
Sbjct: 317 KPLITTVERQLL--ERHILVVLEK-GFTTLMDGRRTEDLQRMQTLFSRVNA-LESLRQAL 372
Query: 311 KQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALK 370
Y G+ +V E+D +++V +L+ F ++ F +K
Sbjct: 373 SSYVRKTGQKIVMDEEKD---------KDMVQSLLDFKASLDIIWEESFYKNESFGNTIK 423
Query: 371 EAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDL 430
++FE N + + AE++A F D + + + S+E +E ++KV+VL + + KD+
Sbjct: 424 DSFEHLIN--LRQNRPAELIAKFLDEKLRAGN-KGTSEEELESVLEKVLVLFRFIQGKDV 480
Query: 431 FAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTAL 490
F FY+K LA+RLL K + D +K+ +SKLK G FT K+EGM D+ L++E +
Sbjct: 481 FEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF 540
Query: 491 DDWFSSNLNEK-PQ-FDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKAR 548
SS K P ++SV VLTTG WP+Y + LP E+ + FK+FY +K R
Sbjct: 541 KQ--SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGR 598
Query: 549 KLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLI 608
+L W SLG+C + F EL VS +QA LMLFNDA +LSF +I ++ +L
Sbjct: 599 RLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTSIEDKELR 658
Query: 609 RVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREIN 664
R L SL+C K ++L K P + + D FEFN +F + RI++ V++
Sbjct: 659 RTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMKETVEENTSTT 718
Query: 665 EDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINRE 724
E V +DR++ IDAA+VRIMK+RKVL + LI+E + L KP +K RI+ LI+RE
Sbjct: 719 ERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPA--DLKKRIESLIDRE 776
Query: 725 FIERDSKDPTMFNYSA 740
++ER+ +P ++NY A
Sbjct: 777 YLEREKSNPQIYNYLA 792
Score = 192 (72.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 70/291 (24%), Positives = 129/291 (44%)
Query: 42 TLYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEF--MLREF 99
+LY V +LC +L +LY + + EEH+ S L S + + L
Sbjct: 118 SLYQAVDNLCLHKLDG--------KLYDQIEKECEEHI-SAALQSLVGQNTDLTVFLSRV 168
Query: 100 VKQWENINVMGRWLLRFFEYLDRFYVRSQAGLASLIEVPVVVFRDRVY--KDLKRDVRDT 157
K W++ + LDR YV + SL E+ + +FR + ++++
Sbjct: 169 EKCWQDFCDQMLMIRSIALTLDRKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKG 228
Query: 158 VIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSW 217
++++I++ER E ++R L+ + +F +GI Y + FE+ ++ +Y + +
Sbjct: 229 LLSMIEKERLAEAVNRTLLSHLLKMFTALGI-----YMESFEKPFLEGTSEFYAAEGMKY 283
Query: 218 ILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGC 277
+ PEY+ E L +E +R + Y + LI V+ +LL R+ L+ EK G
Sbjct: 284 MQQSDVPEYLKHVEGRLHEENERCILYIDAVTRKPLITTVERQLL--ERHILVVLEK-GF 340
Query: 278 RALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ + +DL R+ L+ LE + Y G+ +V E+D
Sbjct: 341 TTLMDGRRTEDLQRMQTLFSRVNA-LESLRQALSSYVRKTGQKIVMDEEKD 390
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 207/711 (29%), Positives = 354/711 (49%)
Query: 59 QDCSYSQRLYVKYGEVFEEHMQSDVLPSF-EDKRGEFMLREFVKQWENINVMGRWLLRFF 117
+D + LY + E + H+ + LP ED +L+ + +QWE+ + L
Sbjct: 72 EDKTVGFELYKRIKEFLKNHLTN--LPKDGEDLMDIGILKFYTQQWEDYQFSSKVLNGIC 129
Query: 118 EYLDRFYVRS--QAG--LASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDR 173
L++ + S G + + + +V +RD +++ L + V + V+ LI++ER GE I+
Sbjct: 130 ARLNKHLLNSTNNEGHNVCEIYSLAMVTWRDCLFRPLNKQVTNAVLKLIEKERNGESINT 189
Query: 174 ALVKKAVDIFVGIGIL-DMDF--------YRQDFEEQMIDDAGCYYLRKASSWILNDSCP 224
L+ A+ ++ +G+ D F Y++ FE Q + D YY RK++ + +
Sbjct: 190 RLISGAIQSYLELGVNEDNQFEESPMLTVYKEAFESQFLADTERYYTRKSTELLQQNPVT 249
Query: 225 EYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQE 284
EYM K E L +ER RA Y H S+ KL K + L+ H L ++ L++
Sbjct: 250 EYMKKVEALLLEERRRARVYLHQSSKGKLARKCRQVLVEKHLEIFLTEFQN----LLNAN 305
Query: 285 KFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKI 344
K +DL R++RL + GL I + + +QG + + + E N + V +
Sbjct: 306 KSEDLGRMYRLIYRIKNGLGEFKKILETHIHNQGLSAIEECGEAALNDP----RMYVETV 361
Query: 345 LELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIV------EISSAEILATFCDNLF 398
L +H K+ A V F +H F+ AL +A F N + V S E+LA +CD+L
Sbjct: 362 LNIHKKYNALVISAFRNHADFVAALDKACSGFINNNAVTKMAQSSSKSPELLAQYCDSLL 421
Query: 399 KNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFL 458
K S ++ + +E T++ V+ + Y KD+ +FY K LA+RL+ + D + + +
Sbjct: 422 KKS-SKNPEEAELEDTLNHVMTVFKYMDDKDVVQKFYTKMLAKRLVHQNSASDDAEASMV 480
Query: 459 SKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDL--SVMVLTTGSW 516
SKLKQ G +T+K++ M D+ +++ AL+ F +L + DL S+ VL+ G W
Sbjct: 481 SKLKQACGFEYTSKLQRMFQDIGVSK----ALNAQFKKHLMDSEPLDLDFSIHVLSYGWW 536
Query: 517 PSYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVST 576
P + + LPSE+ F FY + RKL+W Y L + + L VST
Sbjct: 537 PFEESCTVLLPSELEPCYRRFTAFYASCYSDRKLSWAYQLSEGELVTNYFKNNYTLRVST 596
Query: 577 YQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKIL-NKEPNTKTIS-QS 634
+Q A L+ +N D + +++ + + +VL L K +L +K N + +
Sbjct: 597 FQMAILLQYNTEDAYTIQQLMDSTQIKMDIVAQVLQILLKFKLLVLEDKSANVDEVELKP 656
Query: 635 DSF-EFNAKFTDRMRRIRIPLP-PVDDRRE---INEDVGKDRRHNIDAALVRIMKSRKVL 689
D+ + + + + R+ I LP ++ +RE + +++ +DR+ I AA+VRIMK RKV+
Sbjct: 657 DTLIKLHFGYKSKKLRVNISLPMKIEQKREQETMYKNIEEDRKLLIQAAIVRIMKMRKVV 716
Query: 690 GYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
+QQL+ E LS FKP+I IK ID LI +E++ER + ++Y A
Sbjct: 717 KHQQLLGEVATQLSSVFKPQISVIKKCIDILIEKEYLERVGDEKDTYSYLA 767
Score = 180 (68.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 87/370 (23%), Positives = 165/370 (44%)
Query: 43 LYTIVYDLCSIELPSAQ-----------DCSYSQRLYVKYGEVFEEHMQSDVLPSF-EDK 90
LYT++Y+ C P AQ D + LY + E + H+ + LP ED
Sbjct: 45 LYTLLYNHCLYVSPQAQTQSKKGQKLREDKTVGFELYKRIKEFLKNHLTN--LPKDGEDL 102
Query: 91 RGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRS--QAG--LASLIEVPVVVFRDRV 146
+L+ + +QWE+ + L L++ + S G + + + +V +RD +
Sbjct: 103 MDIGILKFYTQQWEDYQFSSKVLNGICARLNKHLLNSTNNEGHNVCEIYSLAMVTWRDCL 162
Query: 147 YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDA 206
++ L + V + V+ LI++ER GE I+ L+ A+ ++ +G+ + D FEE +
Sbjct: 163 FRPLNKQVTNAVLKLIEKERNGESINTRLISGAIQSYLELGVNE-D---NQFEESPMLTV 218
Query: 207 GCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHR 266
Y S L D+ Y K+ E L++ V + + E+ L+E+ + + +H+
Sbjct: 219 ---YKEAFESQFLADTERYYTRKSTELLQQN---PVTEYMKKVEALLLEERRRARVYLHQ 272
Query: 267 NQLLENEKSGCRALISQEKFDD-LSRIFRLYDETRTGLEPVAGIFKQ-YFIDQG-----K 319
+ + + CR ++ ++ + L+ L + ++ E + +++ Y I G K
Sbjct: 273 SSKGKLARK-CRQVLVEKHLEIFLTEFQNLLNANKS--EDLGRMYRLIYRIKNGLGEFKK 329
Query: 320 AL---VHQ----AEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEA 372
L +H A E+ N + V +L +H K+ A V F +H F+ AL +A
Sbjct: 330 ILETHIHNQGLSAIEECGEAALNDPRMYVETVLNIHKKYNALVISAFRNHADFVAALDKA 389
Query: 373 FEVFCNESIV 382
F N + V
Sbjct: 390 CSGFINNNAV 399
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 201/712 (28%), Positives = 356/712 (50%)
Query: 58 AQDCSY-SQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRF 116
A +Y + LY + ++HM S +L E K E +L + +W+ +++
Sbjct: 71 ASGANYVGEDLYNRLNLFLKKHM-SQLLKLTETKMDEPLLNYYYTEWDRYTSAMKYINNI 129
Query: 117 FEYLDRFYVRSQA--GLASLIEV---PVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKI 171
F+Y++R++++ + G + E+ +V++RD ++ LK+ + ++++ +I+ ER G +I
Sbjct: 130 FQYMNRYWIKREIDDGKKEVYEIFILSLVIWRDCLFTPLKQRLTNSLLDIIESERNGYQI 189
Query: 172 DRALVKKAVDIFVGIGI-------LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCP 224
+ L+K ++ +V +G+ + Y+ FEE + YY +++ +I +S
Sbjct: 190 NTHLIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVA 249
Query: 225 EYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQE 284
+YM K E L +E R Y H +ES+LI K + L+ H +++ NE + L+ ++
Sbjct: 250 DYMKKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKHV-EVIWNE---FQTLLEKD 305
Query: 285 KFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKI 344
K DL+R++ L GLEP+ +++ + G QA + + + +
Sbjct: 306 KIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQNVGL----QAVSSIATNGVIEPKVYIETL 361
Query: 345 LELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEIS------SAEILATFCDNLF 398
L++ K+ V+ F F+ +L +A F NE+ V I+ S E+LA F D L
Sbjct: 362 LKVFKKYNELVTGAFRSDTGFVASLDKACRRFINENAVTIAAKSSSKSPELLARFTDFLL 421
Query: 399 KNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFL 458
K S E +E+ ++ V+++ Y + KD+F +FY K LA+RL+ ++D + T +
Sbjct: 422 KKSPNNPEESE-MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLIHGTSTSEDLEGTMI 480
Query: 459 SKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPS 518
KLK G +T+K++ M TD+ L+RE ++ D SV+VL TGSWP
Sbjct: 481 GKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFNNHIEQVERSSLNIDFSVLVLATGSWPL 540
Query: 519 YK-FFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKF---ELKAIELIV 574
++P E+ + F+KFY + RKL W++ L + K+ L
Sbjct: 541 QPPSTNFSIPKELQACEQLFQKFYQNQHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQC 600
Query: 575 STYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEP--NTKTIS 632
STYQ L+ FN + L+ EI L L L SL+ K KIL +P + + I+
Sbjct: 601 STYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSLA--KSKILLADPPLDDEEIA 658
Query: 633 QSDSFEFNAKFTDRMRRIRIPLPPVDDRRE----INEDVGKDRRHNIDAALVRIMKSRKV 688
++ F N +F ++ +I I +P + +E I++ V +DR+ I AA+VRIMK RK
Sbjct: 659 KTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDSIHKTVEEDRKLQIQAAIVRIMKMRKQ 718
Query: 689 LGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
L + L++E + L F P++ IK ID LI +E++ R ++Y A
Sbjct: 719 LAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMRVEGKKDHYSYVA 770
Score = 163 (62.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 44/203 (21%), Positives = 101/203 (49%)
Query: 3 SKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCS---------I 53
+K+ + ++ W +E+ F ++ + LYT VYD C+ +
Sbjct: 9 TKRSVKLDDIWPELEEGIYKIITDLNKG----FPKQKWIALYTHVYDYCAASQSKSSAKV 64
Query: 54 ELPSAQ--DCSY-SQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMG 110
+P Q +Y + LY + ++HM S +L E K E +L + +W+
Sbjct: 65 GMPKQQASGANYVGEDLYNRLNLFLKKHM-SQLLKLTETKMDEPLLNYYYTEWDRYTSAM 123
Query: 111 RWLLRFFEYLDRFYVRSQA--GLASLIEV---PVVVFRDRVYKDLKRDVRDTVIALIDEE 165
+++ F+Y++R++++ + G + E+ +V++RD ++ LK+ + ++++ +I+ E
Sbjct: 124 KYINNIFQYMNRYWIKREIDDGKKEVYEIFILSLVIWRDCLFTPLKQRLTNSLLDIIESE 183
Query: 166 REGEKIDRALVKKAVDIFVGIGI 188
R G +I+ L+K ++ +V +G+
Sbjct: 184 RNGYQINTHLIKGVINGYVSLGL 206
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 202/761 (26%), Positives = 369/761 (48%)
Query: 6 KLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQDCSYSQ 65
K EE+W +E E + M LYT V++ C+ + +Q
Sbjct: 11 KDDLEETWVFLENGINNVMVKL----EDGVDMKNYMALYTAVHNFCTSHKAVSGQAIQAQ 66
Query: 66 R--------LYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFF 117
R LY K GE H++ V E +L ++++W+ +++ F
Sbjct: 67 RGAHLLGEELYRKLGEYLSRHLEW-VHGESMGHTDEALLSFYIREWQRYTTAAKYINHLF 125
Query: 118 EYLDRFYVRSQA--GLASLIEV---PVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKID 172
YL+R +V+ + G ++ +V +V +++ + + V V+ L++++R GE I+
Sbjct: 126 RYLNRHWVKREIDEGKKNVYDVYTQHLVKWKEDFFLKVHEKVMGAVLKLVEKQRNGETIE 185
Query: 173 RALVKKAVDIFVGIGILDMD-------FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPE 225
++ +K VD FV +G+ + D YR F+ ++ YY ++ ++ ++S E
Sbjct: 186 QSRIKSIVDSFVSLGLDETDPTKSTLEIYRYYFQRPFLEATRIYYEDESRQFVADNSVVE 245
Query: 226 YMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEK 285
YM KAE L++E+ R Y + SK + ++LV ++LL +E + L+ E+
Sbjct: 246 YMKKAEIRLEEEKARVGLYLNN-DISKDLTSTCLDVLVTAHSELLRDE---FQPLLDNER 301
Query: 286 FDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNL-VGKI 344
DDL+R++RL + GL+P+ F+ + G + V E V + + E + V +
Sbjct: 302 QDDLARMYRLLSRIKDGLDPLRTKFEAHVRRAGLSAV----EKVAAEGDSFEPKMYVDAL 357
Query: 345 LELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIV----EISSAEILATFCDNLFKN 400
L +H ++ + V F F+ +L A F N + + + E+LA + D+L K
Sbjct: 358 LSVHTRYHSLVKEAFNGESEFVRSLDNACREFVNRNKICKSGSTKTPELLAKYTDSLLKR 417
Query: 401 SDAEKLSDET-VERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLS 459
K ++E+ +E + +++ + Y + KD+F +FY K LA+RL+ + D + + +S
Sbjct: 418 GS--KAAEESELEEMLVQIMTVFKYIEDKDVFQKFYSKMLAKRLVHVSSVSDDAETSMIS 475
Query: 460 KLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNL----NEKPQFDLSVMVLTTGS 515
KLK+ G +T K++ M D+ ++++ ++ DW + + K D +L TG
Sbjct: 476 KLKEACGFEYTNKLQRMFQDIQISKDLNSSYKDWLEKSFLDDDDRKKLVDSHFQILGTGF 535
Query: 516 WP-SYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSL--GNCHVNGKFELKA-IE 571
WP + P E+VK E F+KFY K RKLTW++ L G N K
Sbjct: 536 WPLTAPSTSFLAPPEIVKTSERFQKFYCDKHNGRKLTWLWQLCKGELKANYIKNTKVPYT 595
Query: 572 LIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTI 631
+VSTYQ L+LFN++D L++S+I L +++ S+ K K+LN P
Sbjct: 596 FLVSTYQMGILLLFNESDTLTYSDIQKATTLTP-EILDPNLSIFL-KAKVLNISPEGSKP 653
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGK----DRRHNIDAALVRIMKSRK 687
+F N F ++ ++ + + +++ +D K DR+ + +A+VRIMKSRK
Sbjct: 654 GPDSTFSLNYNFKNKKIKVNLNIQIRSEQKVETDDTHKTIEEDRKLLLQSAIVRIMKSRK 713
Query: 688 VLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIER 728
+ + QL+ E + + F P++ IK I+ L+ +++IER
Sbjct: 714 KMKHVQLVQEVIHQVKSRFPPQVPDIKKNIEALMEKDYIER 754
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 667 (239.9 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 174/633 (27%), Positives = 322/633 (50%)
Query: 139 VVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMD------ 192
+VV++ ++ DLK V D ++ LI ER G I+ + V+ V +G+ D +
Sbjct: 160 LVVWKRNLFNDLKDKVIDAMLELIRSERTGSMINSRYISGVVECLVELGVDDSETDAKKD 219
Query: 193 -------FYRQDFEEQMIDDAGCYYLRKASSWILND-SCPEYMIKAEECLKKERDRAVYY 244
Y++ FE + ++ +Y ++A++++ N + +YMIK E L +E DR Y
Sbjct: 220 AETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLY 279
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
++ +++ L + +L+ ++ L+ G L+ ++ DDLSR+F+L D GL+
Sbjct: 280 LNSSTKTPLATCCE-SVLISNQLDFLQRHFGG---LLVDKRDDDLSRMFKLCDRVPNGLD 335
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
+ + + +G HQA E V + A + V +LE+H+++ + V+ F +
Sbjct: 336 ELRKSLENHIAKEG----HQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPG 391
Query: 365 FLMALKEAFEVFCNESIVE---------ISSAEILATFCDNLFKNSDAEKLSDET-VERT 414
F+ +L +A F N + V SAE+LA +CD L + S K+ DE +E
Sbjct: 392 FMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSS--KMPDEAELEEL 449
Query: 415 MDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKME 474
K++V+ Y KD+F++FY K ++RL+ + + + + F++KLK G +T ++
Sbjct: 450 QTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLS 509
Query: 475 GMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGV 534
M+ D ++++ + + L +K + +V+VL++GSWP++ + LP ++ K +
Sbjct: 510 KMVNDTQVSKDLTADFKEKKADMLGQK-SVEFNVLVLSSGSWPTFPTTPITLPQQLSKTI 568
Query: 535 ESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFS 594
E F +FY K R+LTW+YS + K +T Q ++LFN+ D +
Sbjct: 569 EIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVE 628
Query: 595 EIL--TQLNLNKGDLI--RVLHSLSCSKHKILNKE---PNTKTISQSDSFEFNAKFTDRM 647
+I T+++ I ++ +L L KE P T T+S + ++ N K +
Sbjct: 629 QIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAY-MNKKVRVDL 687
Query: 648 RRIRIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFK 707
+ + V D + ++V +DR+ I A +VRIMK+RK + +QQL++E + LS FK
Sbjct: 688 SKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFK 747
Query: 708 PEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
P+++ IK I LI +E++ R ++ Y A
Sbjct: 748 PKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
Score = 204 (76.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 100/449 (22%), Positives = 194/449 (43%)
Query: 76 EEHMQSDVLPSFE---DKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQA--G 130
EE++++ V+ E + GE +L+ + +WEN + + + F YL+R ++R + G
Sbjct: 89 EEYVKAYVIAVCEKGAELSGEDLLKYYTTEWENFRISSKVMDGIFAYLNRHWIRRELDEG 148
Query: 131 LASLIEV---PVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIG 187
++ V +VV++ ++ DLK V D ++ LI ER G I+ + V+ V +G
Sbjct: 149 HENIYMVYTLALVVWKRNLFNDLKDKVIDAMLELIRSERTGSMINSRYISGVVECLVELG 208
Query: 188 ILDMDF-YRQDFEEQMIDDAGCYYLRK---ASSWILNDSCPEYMIKA---EECLKKERDR 240
+ D + ++D E + + ++ K A+ ++ + + K R
Sbjct: 209 VDDSETDAKKDAETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETR 268
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCR----ALISQEKFDDLSRIFRLY 296
+ R + L + L + L+ N+ + L+ ++ DDLSR+F+L
Sbjct: 269 -LNQEDDRCQLYLNSSTKTPLATCCESVLISNQLDFLQRHFGGLLVDKRDDDLSRMFKLC 327
Query: 297 DETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVS 356
D GL+ + + + +G HQA E V + A + V +LE+H+++ + V+
Sbjct: 328 DRVPNGLDELRKSLENHIAKEG----HQALERVAMEAATDAKLYVKTLLEVHERYQSLVN 383
Query: 357 ICFGDHKLFLMALKEAFEVFCNESIV--EISSAEILATFCDNLFKNSDA--EKLSDETVE 412
F + F+ +L +A F N + V L + L + D K S E
Sbjct: 384 RSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDE 443
Query: 413 RTMDKVIV-LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLK--QHSGGHF 469
++++ ++ FKY D + +F K K + K +S+L + +F
Sbjct: 444 AELEELQTKIMVVFKYID-----------DKDVFSKFYTKMFSKRLISELSASDEAEANF 492
Query: 470 TTKMEGMITDVVLARENQTALDDWFSSNL 498
TK++ M AR ++ D S +L
Sbjct: 493 ITKLKSMCGYEYTARLSKMVNDTQVSKDL 521
Score = 57 (25.1 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 36 ASEECMTLYTIVYDLC-SIELPSAQ 59
A ++ MTLYT VYD C SI L +++
Sbjct: 34 APKDYMTLYTSVYDYCTSITLSTSR 58
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 435 (158.2 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
Identities = 97/251 (38%), Positives = 140/251 (55%)
Query: 494 FSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWI 553
+ N N +L+V +LT G WP+Y ++LP EMVK E FK FY K RKL W
Sbjct: 506 YMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQ 565
Query: 554 YSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHS 613
+LG+C + +F+ EL VS +Q L++FN+ + S EI + G+L R L S
Sbjct: 566 STLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQS 625
Query: 614 LSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINEDVGK 669
L+C K ++L K P K I D F N F ++ RI+I V+++ E V +
Sbjct: 626 LACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQ 685
Query: 670 DRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERD 729
DR++ IDAA+VRIMK RK L + L+SE L KP +K RI+ LI+R+++ERD
Sbjct: 686 DRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERD 743
Query: 730 SKDPTMFNYSA 740
++P +NY A
Sbjct: 744 KENPNQYNYIA 754
Score = 341 (125.1 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
Identities = 79/273 (28%), Positives = 144/273 (52%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE++ + + Y + + PEY+ + L++E DR + Y +
Sbjct: 246 DLQIYQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 305
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G +L+ + + DLS +++L+ R G++ +
Sbjct: 306 QKSLIASVEKQLLGEHLTAILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQH 362
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + CF ++ F+ A+
Sbjct: 363 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDTCFLKNEKFINAM 413
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + KD
Sbjct: 414 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKD 470
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLK 462
+F FY+K LA+RLL K + D +K+ LSKLK
Sbjct: 471 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 503
Score = 276 (102.2 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 75/300 (25%), Positives = 147/300 (49%)
Query: 36 ASEECMTLYTIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFED--KR 91
A E +I Y+L + CSY S LY + ++ E+H+++ + F+ K
Sbjct: 92 AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQI-HQFKTGFKD 150
Query: 92 GEFMLREFVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDL 150
L++ + W+N + ++R F +LDR YV + L S+ ++ + +FR + D
Sbjct: 151 TVLFLKKIDRCWQN-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQ 209
Query: 151 KRDVR--DTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGC 208
K + D ++ LI+ ER GE IDR+L++ +++ + D+ Y+ FE++ + +
Sbjct: 210 KVQTKTIDGILLLIERERNGEAIDRSLLRSLLNM-----LSDLQIYQDSFEQRFLQETNR 264
Query: 209 YYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQ 268
Y + + PEY+ + L++E DR + Y ++ LI V+ +LL H
Sbjct: 265 LYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIASVEKQLLGEHLTA 324
Query: 269 LLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
+L+ G +L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 325 ILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKD 381
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 419 (152.6 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 105/358 (29%), Positives = 185/358 (51%)
Query: 213 KASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLEN 272
++ ++ +S Y+ K E + +E +R ++ +E +++ V+ EL+ H ++E
Sbjct: 2 ESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEM 61
Query: 273 EKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNK 332
E SG ++ K +DL+ +++L+ GL+ + Y +QGKALV + E + +N
Sbjct: 62 ENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSE-EGEGKNP 120
Query: 333 TANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILAT 392
+ + +L+L +F ++ F + +LF + FE F N + S E L+
Sbjct: 121 V-----DYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSL 172
Query: 393 FCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKD 452
F D+ K + L+++ VE +DK +VL + + KD+F +Y++ LARRLL +K + D
Sbjct: 173 FIDDKLKKG-VKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDD 231
Query: 453 YDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQ----FDLSV 508
+K +SKLK G FT+K+EGM D+ ++ T +D+ F +L DL+V
Sbjct: 232 SEKNMISKLKTECGCQFTSKLEGMFRDMSISN---TTMDE-FRQHLQATGVSLGGVDLTV 287
Query: 509 MVLTTGSWPSYKFFG-LNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKF 565
VLTTG WP+ N+P E F++FY K R+LT + +G+ +N F
Sbjct: 288 RVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 345
Score = 316 (116.3 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 359 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 417
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 418 CGKPTQRVLTKEPKSKEIKNGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 477
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 478 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 537
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 538 RTPEDRKVYTYVA 550
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 572 (206.4 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 153/613 (24%), Positives = 303/613 (49%)
Query: 41 MTLYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFV 100
M LY VY LC AQ Y + LY + FE+H+ +L + K + E++
Sbjct: 36 MFLYEDVYKLCI-----AQPQPYCEPLYENIKKFFEQHVDQILLIILDTKSDT--ISEYL 88
Query: 101 KQWE----NINVMGRWLLRFFE--YLDRFYVRSQAGLA-SLIEVPVV---VFRDRVYKDL 150
KQW+ + + + R+ ++++ + + G + E+ ++ ++++R++ +
Sbjct: 89 KQWKLFFSGCELCNKVIFRYLNLNWINKKILDKKFGHPPDVYEIQILGLMIWKERLFFKI 148
Query: 151 KRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMD--FYRQDFEEQMIDDAGC 208
K V V LI ++R+GE + + + ++ + + +D D Y ++E +++
Sbjct: 149 KDRVLKCVEILIQKDRDGELVQHQFISQFMESLIKLDSVDKDRTLYLIEYEASYLENTRQ 208
Query: 209 YYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQ 268
+Y R++ ++I + YM KAE + +E R+ Y ++ S K+ ++ H +L+ +
Sbjct: 209 FYTRESVAFIASSGISSYMKKAETRIDEEEQRSQKYLNSSSHDKM-RRLLHSILIEKHKE 267
Query: 269 LLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
LL++E C + EK D++ +++L GL PV ++Y G + +
Sbjct: 268 LLQSE---CINYLKDEKLDEIYNMYKLLSRIEGGLAPVLETVQKYIQHVGIDAIKSIPD- 323
Query: 329 VRNKTANMEQNL-VGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVE---I 384
RN N + + V +L+++ +F + + F + F+ L A N++ +
Sbjct: 324 -RN---NPDPKIYVETLLKIYLQFSSIIKKSFNNDVSFITVLDLACHKIFNQNHITRNTT 379
Query: 385 SSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLL 444
S E+LA +CD L K + + E +E + ++IVL Y KD+F +FY K L+RRL+
Sbjct: 380 KSPELLAKYCDMLLKKGNKQHEEIE-LEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRLI 438
Query: 445 FDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQF 504
+ D +K ++ LKQ G +T+K + M D+ L+ E + N +
Sbjct: 439 NGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFNDITLSAETNEEFKNHLIKNSLSIGKI 498
Query: 505 DLSVMVLTTGSWPSY-KFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNG 563
D S++VLT+GSW + + +P E+ + +F+++Y T+ + RKL W++ L
Sbjct: 499 DFSILVLTSGSWSLHSQTSSFIVPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKS 558
Query: 564 KFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILN 623
F K+ + V+ +Q L++FN + +S EI NLN+ +L R L SL +K +++
Sbjct: 559 FFAKKSYDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSLIEAKI-LIS 617
Query: 624 KEPNTKTISQSDS 636
K+ + +I+ +++
Sbjct: 618 KKKDQNSINNNNN 630
Score = 144 (55.7 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 33/122 (27%), Positives = 67/122 (54%)
Query: 623 NKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINED----VGKDRRHNIDAA 678
N +P++ + S + + N+ ++++ ++++ + NE+ + +DR+ + A+
Sbjct: 651 NMQPSSSS-SSTQEYTVNSAYSNKRSKVKVSSSLQKETPLQNEETYKGIDEDRKLYLQAS 709
Query: 679 LVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNY 738
+VRIMK+RK + + LI E +E F+P I IK I+ LI +E+I R + + Y
Sbjct: 710 IVRIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLY 769
Query: 739 SA 740
+A
Sbjct: 770 AA 771
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 175/640 (27%), Positives = 319/640 (49%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 68 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 127
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 128 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 186
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 187 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 246
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 247 VIHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 306
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 307 NGLKTMCECMSSYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFN 360
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 361 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVESILDKAMV 416
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 417 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 476
Query: 481 VLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVESFKK 539
++ +S DL V VLTTG WP+ N+P E F++
Sbjct: 477 SISNTTMDEFRQHLTSTGVSLGGVDLIVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRR 536
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE-------------------LIVSTYQ 578
FY K R+LT + +G+ +N F +K + L VST+Q
Sbjct: 537 FYLAKHSGRQLTLQHHMGSADLNATFYGPIKKEDGSDMVGGAQVTGSNTRKHILQVSTFQ 596
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTISQSDS 636
LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 597 MTILMLFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHV 656
Query: 637 FEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT R+ R++I V ++ ++ K+ R +D
Sbjct: 657 FTVNDQFTSRLHRVKIQT--VAAKQGESDPERKETRQKVD 694
Score = 317 (116.6 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 72/193 (37%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 575 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVRALQSLA 633
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT R+ R++I +R+E + V
Sbjct: 634 CGKPTQRVLTKEPKSKEIENGHVFTVNDQFTSRLHRVKIQTVAAKQGESDPERKETRQKV 693
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 694 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLA 753
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 754 RTPEDRKVYTYVA 766
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 171/538 (31%), Positives = 278/538 (51%)
Query: 225 EYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQE 284
EY+ KAE+ ++E++R+ Y T+ S L+ V+ ELL H + LLEN+ +G ++I
Sbjct: 255 EYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDDLLENQSTGFFSMIDSS 314
Query: 285 KFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTA--NMEQNL-- 340
F+ L ++ + G++ + +Y GK + + + K A + N
Sbjct: 315 NFEGLQLVYESFSRVELGVKSLKKYLAKYVAHHGKLINETTSQALEGKMAVGRLSSNATM 374
Query: 341 ----VGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDN 396
V K+L L D+ +S + L +L +AF F + + E ++ F D+
Sbjct: 375 ATLWVQKVLALWDRLNTIISTTMDADRSILNSLSDAFVTFVDGYT---RAPEYISLFIDD 431
Query: 397 LFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKT 456
K DA K + ++E T+ + L + KD+F ++Y+ LA+RLL ++ + D +
Sbjct: 432 NLKK-DARKAIEGSIEATLQNSVTLFRFISEKDVFEKYYKTHLAKRLLNNRSISSDAELG 490
Query: 457 FLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDW-FSSNLNE-KPQFDLSVMVLTTG 514
+S+LKQ +G FT K+EGM D+ L++E L ++ +S L KP DL+V +L +
Sbjct: 491 MISRLKQEAGNVFTQKLEGMFNDMNLSQE---LLQEYKHNSALQSAKPALDLNVSILAST 547
Query: 515 SWP---SYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIE 571
WP S N P ++ ++ F FY +K RKL W S+G+ V F+ + +
Sbjct: 548 FWPIDLSPHKIKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMGSADVRVNFKDRKYD 607
Query: 572 LIVSTYQAACLMLFNDADR---LSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNT 628
L VST + L+LF D L F EIL + N+ GDL R L SL+C+K+KIL K+P
Sbjct: 608 LNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYKILLKDPKG 667
Query: 629 KTISQSDSFEFNAKFTDRMRRIRIPLPP---VDD---RREINEDVGKDRRHNIDAALVRI 682
+ ++ D F FN F + RI+I V+D R+ E V + R+H DA +VR+
Sbjct: 668 REVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRV 727
Query: 683 MKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
MK RKV + QL++E L+ F P IK RI+ LI RE+++R + + ++ Y A
Sbjct: 728 MKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 166/578 (28%), Positives = 285/578 (49%)
Query: 96 LREFVKQWENINVMGRWLLRFFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYK---DLKR 152
L V W++ V + + +YLD+ Y +S A + E + +FR+ V ++
Sbjct: 122 LSSLVNSWKDHIVSMQMISSVLKYLDKVYSKS-ADKVPVNENGIYIFREVVLLNSFEIGE 180
Query: 153 DVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMD--FYRQDFEEQMIDDAGCYY 210
+T++ L+ ER+G I+R L+ +D+ + + Y F + + +Y
Sbjct: 181 KCVETILILVYLERKGNTINRPLINDCLDMLNSLPSENKKETLYDVLFAPKFLSYTRNFY 240
Query: 211 LRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLL 270
++S+ I EY+ KAE+ ++E++R+ Y T+ S L+ V+ ELL H + LL
Sbjct: 241 EIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDDLL 300
Query: 271 ENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVR 330
EN+ +G ++I F+ L ++ + G++ + +Y GK + + +
Sbjct: 301 ENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAKYVAHHGKLINETTSQALE 360
Query: 331 NKTA--NMEQNL------VGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIV 382
K A + N V K+L L D+ +S + L +L +AF F +
Sbjct: 361 GKMAVGRLSSNATMATLWVQKVLALWDRLNTIISTTMDADRSILNSLSDAFVTFVDGYT- 419
Query: 383 EISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARR 442
+ E ++ F D+ K DA K + ++E T+ + L + KD+F ++Y+ LA+R
Sbjct: 420 --RAPEYISLFIDDNLKK-DARKAIEGSIEATLQNSVTLFRFISEKDVFEKYYKTHLAKR 476
Query: 443 LLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDW-FSSNLNE- 500
LL ++ + D + +S+LKQ +G FT K+EGM D+ L++E L ++ +S L
Sbjct: 477 LLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNLSQE---LLQEYKHNSALQSA 533
Query: 501 KPQFDLSVMVLTTGSWP---SYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLG 557
KP DL+V +L + WP S N P ++ ++ F FY +K RKL W S+G
Sbjct: 534 KPALDLNVSILASTFWPIDLSPHKIKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMG 593
Query: 558 NCHVNGKFELKAIELIVSTYQAACLMLFNDADR---LSFSEILTQLNLNKGDLIRVLHSL 614
+ V F+ + +L VST + L+LF D L F EIL + N+ GDL R L SL
Sbjct: 594 SADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSL 653
Query: 615 SCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRI 652
+C+K+KIL K+P + ++ D F FN F + RI+I
Sbjct: 654 ACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKI 691
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 178/645 (27%), Positives = 325/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 69 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 129 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 308 NGLKTMCECMSLYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFS 361
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 362 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVESILDKAMV 417
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 478 SISN---TTMDE-FRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFE 533
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 534 IFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQ 593
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ D+ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 594 VSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 653
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 654 ESGHMFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 696
Score = 321 (118.1 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 72/193 (37%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ D+ +F EI + ++ + +L+R L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLA 635
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 756 RTPEDRKVYTYVA 768
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 178/645 (27%), Positives = 324/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V L+ + W + + Y+DR
Sbjct: 67 HGEKLYTGLREVVTEHLINKVREDVLHSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 126
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 127 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 185
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE +D + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 186 QMLMVLGLKGRSVYEEDFEIPFLDMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 245
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 246 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFGRVP 305
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 306 NGLKTMCECMSWYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFN 359
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 360 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVESILDKAMV 415
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 416 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 475
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 476 SISN---TTMDE-FRHHLQTSQVSLCGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFE 531
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 532 VFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPIKKEDGSDVGVGGALLTGSNTRKHILQ 591
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 592 VSTFQMTILMLFNNREKFTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 651
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 652 ESGHVFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 694
Score = 310 (114.2 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 70/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G + G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 575 VGGALLTGSNTRKHI-LQVSTFQMTILMLFNNREKFTFEEIQQETDIPERELVRALQSLA 633
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 634 CGKPTQRVLTKEPKSKEIESGHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 693
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 694 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLA 753
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 754 RTPEDRKVYTYVA 766
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 174/641 (27%), Positives = 319/641 (49%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 47 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 106
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 107 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 165
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 166 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 225
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 226 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 285
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 286 NGLKTMCECMSSYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFN 339
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 340 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVETILDKAMV 395
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 396 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 455
Query: 481 VLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVESFKK 539
++ S DL+V VLTTG WP+ N+P E F++
Sbjct: 456 SISNTTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 515
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LIVSTY 577
FY K R+LT + +G+ +N F +K + L VST+
Sbjct: 516 FYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTF 575
Query: 578 QAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTISQSD 635
Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 576 QMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGH 635
Query: 636 SFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 636 IFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 674
Score = 316 (116.3 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 555 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 613
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 614 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 673
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 674 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 733
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 734 RTPEDRKVYTYVA 746
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 177/645 (27%), Positives = 325/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 69 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 129 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 308 NGLKTMCECMSLYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFS 361
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 362 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVESILDKAMV 417
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 478 SISN---TTMDE-FRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFE 533
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 534 IFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQVTGSNTRKHILQ 593
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 594 VSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 653
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 654 ESGHMFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 696
Score = 318 (117.0 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 75/209 (35%), Positives = 113/209 (54%)
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQ 599
FYG K +G V G K I L VST+Q LMLFN+ ++ +F EI +
Sbjct: 563 FYGAVKKEDGSE--VGVGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQE 619
Query: 600 LNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPV 657
++ + +L+R L SL+C K ++L KEP +K I F N +FT ++ R++I
Sbjct: 620 TDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAA 679
Query: 658 D------DRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIK 711
+R+E + V DR+H I+AA+VRIMKSRK + + L++E + L F P
Sbjct: 680 KQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPV 739
Query: 712 AIKSRIDDLINREFIERDSKDPTMFNYSA 740
IK RI+ LI RE++ R +D ++ Y A
Sbjct: 740 VIKKRIEGLIEREYLARTPEDRKVYTYVA 768
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 177/645 (27%), Positives = 325/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 69 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 129 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 308 NGLKTMCECMSSYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFN 361
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 362 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVETILDKAMV 417
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 478 SISN---TTMDE-FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFE 533
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 534 IFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQ 593
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 594 VSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 653
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 654 ENGHIFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 696
Score = 316 (116.3 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 177/645 (27%), Positives = 325/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 51 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 110
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 111 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 169
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 170 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 229
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 230 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 289
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 290 NGLKTMCECMSSYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFN 343
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 344 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVETILDKAMV 399
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 400 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 459
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 460 SISN---TTMDE-FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFE 515
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 516 IFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQ 575
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 576 VSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 635
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 636 ENGHIFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 678
Score = 316 (116.3 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 559 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 617
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 618 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 677
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 678 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 737
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 738 RTPEDRKVYTYVA 750
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 177/645 (27%), Positives = 325/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 69 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 129 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 308 NGLKTMCECMSSYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFN 361
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 362 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVETILDKAMV 417
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 478 SISN---TTMDE-FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFE 533
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 534 IFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQ 593
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 594 VSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 653
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 654 ESGHIFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 696
Score = 316 (116.3 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 177/645 (27%), Positives = 325/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 69 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 129 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 308 NGLKTMCECMSLYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFS 361
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 362 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVESILDKAMV 417
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 478 SISN---TTMDE-FRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFE 533
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 534 IFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQ 593
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 594 VSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 653
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 654 ESGHMFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 696
Score = 317 (116.6 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 177/645 (27%), Positives = 324/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 69 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 129 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL +++L+
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVP 307
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 308 NGLKTMCECMSSYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLLESFN 361
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 362 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVETILDKAMV 417
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 478 SISN---TTMDE-FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFE 533
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 534 IFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQ 593
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 594 VSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 653
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 654 ENGHIFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 696
Score = 316 (116.3 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 756 RTPEDRKVYTYVA 768
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 177/645 (27%), Positives = 325/645 (50%)
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
+ ++LY EV EH+ + V + L+ + W + + Y+DR
Sbjct: 69 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 123 FYVRSQAGLASLIEVPVVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
YV+ Q + ++ + +++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A
Sbjct: 129 VYVQ-QNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + +G+ Y +DFE ++ + ++ ++ ++ +S Y+ K E + +E +R
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 241 AVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR 300
++ +E +++ V+ EL+ H ++E E SG ++ K +DL+ +++L+
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 301 TGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFG 360
GL+ + Y +QGKALV + E + +N + + +L+L +F ++ F
Sbjct: 308 NGLKTMCECMSCYLREQGKALVSE-EGEGKNPV-----DYIQGLLDLKSRFDRFLQESFN 361
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
+ +LF + FE F N + S E L+ F D+ K + L+++ VE +DK +V
Sbjct: 362 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG-VKGLTEQEVETILDKAMV 417
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L + + KD+F +Y++ LARRLL +K + D +K +SKLK G FT+K+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 481 VLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVE 535
++ T +D+ F +L DL+V VLTTG WP+ N+P E
Sbjct: 478 SISN---TTMDE-FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFE 533
Query: 536 SFKKFYGTKTKARKLTWIYSLGNCHVNGKF--ELKAIE--------------------LI 573
F++FY K R+LT + +G+ +N F +K + L
Sbjct: 534 IFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQ 593
Query: 574 VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK--HKILNKEPNTKTI 631
VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+C K ++L KEP +K I
Sbjct: 594 VSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEI 653
Query: 632 SQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDRRHNID 676
F N +FT ++ R++I V ++ ++ K+ R +D
Sbjct: 654 ESGHIFTVNDQFTSKLHRVKIQT--VAAKQGESDPERKETRQKVD 696
Score = 316 (116.3 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 756 RTPEDRKVYTYVA 768
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 187/675 (27%), Positives = 333/675 (49%)
Query: 101 KQWENINVMGRWLLRFFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRDTV 158
K+W+++ + RW+ F YLD+ ++ + E+ + FR +Y D L+ +
Sbjct: 234 KEWQSMLITVRWI---FYYLDQSFLLHSKEHPVIREMGLQQFRQHIYSDPTLQEKILQGA 290
Query: 159 IALIDEEREGEK---IDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKAS 215
L+ +R E D +L++ A+++F + D Y FE ++ + ++ S
Sbjct: 291 CDLVSADRSDENGIVADSSLLRNAIELFHSL-----DVYVSGFEPVLVSGSKDFF----S 341
Query: 216 SWILNDSC---PEYMIKAEECLKKERDRAVYY-FHTRSESKLIEKVQHELLVVHRNQLLE 271
W ++ Y+ + +++E +R + F+ ++ KL E + + LV + +L
Sbjct: 342 LWAQQEATGYLASYVENSHRLIEREMNRCEQFSFNRTTKQKLSESLD-QTLVTDQESVLL 400
Query: 272 NEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRN 331
++K L K L +++ L + G + + G F Y +++G +V E
Sbjct: 401 SQKDVLGLLRIGNKIA-LGQLYTLLERRDLGAK-LKGAFSTYIVEEGTGIVFDESE---- 454
Query: 332 KTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSA---- 387
A+M L+ +L D + + F ++ AL+E+FE F N+ ++
Sbjct: 455 --ADMVVRLLSFKKQLDDIW----NESFRRNEGLGHALRESFESFMNKGRKSDATGGTDN 508
Query: 388 ----EILATFCDNLFKNS-------DAEK--LSDETVE--RTMDKVIVLLGYFKYKDLFA 432
E++A + D L + +AE L+DE E R +D+V+ L + K +F
Sbjct: 509 PKTGEMIAKYVDRLLRGGWRLAPTREAENMPLADEDAEINRQLDQVLDLFRFVHGKAVFE 568
Query: 433 EFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDD 492
FY+ LARRLL + + D +K+ L++LK G FT +E M D+ +AR+ +A +
Sbjct: 569 AFYKNDLARRLLMGRSASDDAEKSMLARLKTECGSSFTHNLESMFKDMEVARDEMSAYNS 628
Query: 493 WFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTW 552
P DL V VL+ +WP+Y + +P E+ + F+KFY TK RKL W
Sbjct: 629 IKRERQTPLP-VDLHVSVLSASAWPTYPDVQVRIPPEIATAISDFEKFYDTKYNGRKLAW 687
Query: 553 IYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADR---LSFSEILTQLNLNKGDLIR 609
+ L +C + +F EL+VS++QA L+LFN+ L++ +I L+ +L R
Sbjct: 688 KHQLAHCQLRARFPNGNKELVVSSFQAIVLLLFNELPEGGTLNYRQIQEATTLSDQELTR 747
Query: 610 VLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDRREIN----E 665
L SL+C+K+++L+K+P + +S +D F +NA FTD RI+I + + +E N E
Sbjct: 748 TLQSLACAKYRVLSKKPKGRDVSPTDEFSYNASFTDPKFRIKINQIQLKETKEENKTTHE 807
Query: 666 DVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREF 725
V DR + AA+VRIMKSRK + + +L++E ++ E IK I+ LI +++
Sbjct: 808 RVAADRHYETQAAIVRIMKSRKTITHAELVAEVIKATRSRGVLEPADIKKNIEKLIEKDY 867
Query: 726 IERDSKDPTMFNYSA 740
+ER+ D + Y A
Sbjct: 868 MERE--DGNRYQYVA 880
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 177/625 (28%), Positives = 311/625 (49%)
Query: 131 LASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI-- 188
L + E+ + ++R + + L+ + ++ I +R GE ++ ++ ++ FV +
Sbjct: 136 LMEIGELALDMWRKLMVEPLQTILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYK 195
Query: 189 --LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFH 246
+ FY++ FE + + G YY ++AS+ + +C +YM K LK E R Y H
Sbjct: 196 KKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLH 255
Query: 247 TRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPV 306
S +K+I + Q ++ H Q L E C +I QEK +D++ ++ L TGL +
Sbjct: 256 PSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHM 311
Query: 307 AGIFKQYFIDQG-KALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLF 365
+ + D+G +A + +E NM V +LE+H KF+ ++ + F
Sbjct: 312 IQELQNHIQDEGLRATSNLTQE-------NMPTLFVESVLEVHGKFVQLINTVLNGDQHF 364
Query: 366 LMALKEAFEVFCN--ESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLG 423
+ AL +A N E + E+LA +CDNL K S A+ +++ VE + I +
Sbjct: 365 MSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDKLTSFITVFK 423
Query: 424 YFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLA 483
Y KD+F +FY + LA+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++
Sbjct: 424 YIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVS 483
Query: 484 RENQTALDDWFSSNLNEKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESFKK 539
+ ++ F N + +S + VL G+WP + +P E+ K V+ F+
Sbjct: 484 ADLNNKFNN-FIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFEL 542
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQ 599
FY RKLTW++ L V + K +V+TYQ A L+ FN+++ +S+ E+
Sbjct: 543 FYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDS 602
Query: 600 LNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDD 659
+N+ +L + + SL K++N + + I SF N F+ + + +I D
Sbjct: 603 TQMNEKELTKTIKSLL--DVKMINHDSEKEDIDTESSFSLNMNFSSKRTKFKITTSMQKD 660
Query: 660 R-REINED---VGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKS 715
+E+ + V +DR+ + AA+VRIMK+RKVL + LI E + F P I IK
Sbjct: 661 TPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKK 720
Query: 716 RIDDLINREFIERDSKDPTMFNYSA 740
I+ LI++++IER ++Y A
Sbjct: 721 CIEVLIDKQYIERSQASADEYSYVA 745
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 177/625 (28%), Positives = 311/625 (49%)
Query: 131 LASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI-- 188
L + E+ + ++R + + L+ + ++ I +R GE ++ ++ ++ FV +
Sbjct: 136 LMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYK 195
Query: 189 --LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFH 246
+ FY++ FE + + G YY ++AS+ + +C +YM K LK E R Y H
Sbjct: 196 KKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLH 255
Query: 247 TRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPV 306
S +K+I + Q ++ H Q L E C +I QEK +D++ ++ L TGL +
Sbjct: 256 PSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHM 311
Query: 307 AGIFKQYFIDQG-KALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLF 365
+ + D+G +A + +E NM V +LE+H KF+ ++ + F
Sbjct: 312 IQELQNHIHDEGLRATSNLTQE-------NMPTLFVESVLEVHGKFVQLINTVLNGDQHF 364
Query: 366 LMALKEAFEVFCN--ESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLG 423
+ AL +A N E + E+LA +CDNL K S A+ +++ VE + I +
Sbjct: 365 MSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDRLTSFITVFK 423
Query: 424 YFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLA 483
Y KD+F +FY + LA+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++
Sbjct: 424 YIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVS 483
Query: 484 RENQTALDDWFSSNLNEKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESFKK 539
+ ++ F N + +S + VL G+WP + +P E+ K V+ F+
Sbjct: 484 ADLNNKFNN-FIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFEL 542
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQ 599
FY RKLTW++ L V + K +V+TYQ A L+ FN+++ +S+ E+
Sbjct: 543 FYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDS 602
Query: 600 LNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDD 659
+N+ +L + + SL K++N + + I SF N F+ + + +I D
Sbjct: 603 TQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKD 660
Query: 660 R-REINED---VGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKS 715
+E+ + V +DR+ + AA+VRIMK+RKVL + LI E + F P I IK
Sbjct: 661 TPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKK 720
Query: 716 RIDDLINREFIERDSKDPTMFNYSA 740
I+ LI++++IER ++Y A
Sbjct: 721 CIEVLIDKQYIERSQASADEYSYVA 745
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 177/625 (28%), Positives = 311/625 (49%)
Query: 131 LASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI-- 188
L + E+ + ++R + + L+ + ++ I +R GE ++ ++ ++ FV +
Sbjct: 79 LMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYK 138
Query: 189 --LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFH 246
+ FY++ FE + + G YY ++AS+ + +C +YM K LK E R Y H
Sbjct: 139 KKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLH 198
Query: 247 TRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPV 306
S +K+I + Q ++ H Q L E C +I QEK +D++ ++ L TGL +
Sbjct: 199 PSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHM 254
Query: 307 AGIFKQYFIDQG-KALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLF 365
+ + D+G +A + +E NM V +LE+H KF+ ++ + F
Sbjct: 255 IQELQNHIHDEGLRATSNLTQE-------NMPTLFVESVLEVHGKFVQLINTVLNGDQHF 307
Query: 366 LMALKEAFEVFCN--ESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLG 423
+ AL +A N E + E+LA +CDNL K S A+ +++ VE + I +
Sbjct: 308 MSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDRLTSFITVFK 366
Query: 424 YFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLA 483
Y KD+F +FY + LA+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++
Sbjct: 367 YIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVS 426
Query: 484 RENQTALDDWFSSNLNEKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESFKK 539
+ ++ F N + +S + VL G+WP + +P E+ K V+ F+
Sbjct: 427 ADLNNKFNN-FIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFEL 485
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQ 599
FY RKLTW++ L V + K +V+TYQ A L+ FN+++ +S+ E+
Sbjct: 486 FYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDS 545
Query: 600 LNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDD 659
+N+ +L + + SL K++N + + I SF N F+ + + +I D
Sbjct: 546 TQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKD 603
Query: 660 R-REINED---VGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKS 715
+E+ + V +DR+ + AA+VRIMK+RKVL + LI E + F P I IK
Sbjct: 604 TPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKK 663
Query: 716 RIDDLINREFIERDSKDPTMFNYSA 740
I+ LI++++IER ++Y A
Sbjct: 664 CIEVLIDKQYIERSQASADEYSYVA 688
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 177/625 (28%), Positives = 311/625 (49%)
Query: 131 LASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI-- 188
L + E+ + ++R + + L+ + ++ I +R GE ++ ++ ++ FV +
Sbjct: 136 LMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYK 195
Query: 189 --LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFH 246
+ FY++ FE + + G YY ++AS+ + +C +YM K LK E R Y H
Sbjct: 196 KKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLH 255
Query: 247 TRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPV 306
S +K+I + Q ++ H Q L E C +I QEK +D++ ++ L TGL +
Sbjct: 256 PSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHM 311
Query: 307 AGIFKQYFIDQG-KALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLF 365
+ + D+G +A + +E NM V +LE+H KF+ ++ + F
Sbjct: 312 IQELQNHIHDEGLRATSNLTQE-------NMPTLFVESVLEVHGKFVQLINTVLNGDQHF 364
Query: 366 LMALKEAFEVFCN--ESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLG 423
+ AL +A N E + E+LA +CDNL K S A+ +++ VE + I +
Sbjct: 365 MSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDKLTSFITVFK 423
Query: 424 YFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLA 483
Y KD+F +FY + LA+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++
Sbjct: 424 YIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVS 483
Query: 484 RENQTALDDWFSSNLNEKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESFKK 539
+ ++ F N + +S + VL G+WP + +P E+ K V+ F+
Sbjct: 484 ADLNNKFNN-FIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFEL 542
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQ 599
FY RKLTW++ L V + K +V+TYQ A L+ FN+++ +S+ E+
Sbjct: 543 FYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDS 602
Query: 600 LNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDD 659
+N+ +L + + SL K++N + + I SF N F+ + + +I D
Sbjct: 603 TQMNEKELTKTIKSLL--DVKMINHDSEKEDIDVESSFSLNMNFSSKRTKFKITTSMQKD 660
Query: 660 R-REINED---VGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKS 715
+E+ + V +DR+ + AA+VRIMK+RKVL + LI E + F P I IK
Sbjct: 661 TPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKK 720
Query: 716 RIDDLINREFIERDSKDPTMFNYSA 740
I+ LI++++IER ++Y A
Sbjct: 721 CIEVLIDKQYIERSQASADEYSYVA 745
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 307 (113.1 bits), Expect = 2.2e-63, Sum P(3) = 2.2e-63
Identities = 93/288 (32%), Positives = 140/288 (48%)
Query: 316 DQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEV 375
D G+ + E+ V N+ + V IL L KF FG ++ A+ +F
Sbjct: 377 DAGQKKEKEKEKPV-NQVTSSAIKWVDDILALKKKFDGIWKDAFGSDQVLQSAITASFSS 435
Query: 376 FCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFY 435
F N + S+E L+ F D K K +D V+ ++ I LL Y K KD F +Y
Sbjct: 436 FLNSTP---RSSEFLSLFFDENLKKGVKGK-TDNEVDALLENGITLLRYIKDKDRFEAYY 491
Query: 436 RKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFS 495
+K L+RRLL + + D ++ +SK+K G FT ++E M D+ ++ E+ TA F
Sbjct: 492 KKHLSRRLLMKRSMSMDAERQMISKMKMEVGNQFTQRLEAMFRDMTIS-EDLTASYKQFV 550
Query: 496 SNLNE--KPQFDLSVMVLTTGSWP-----SYKFFGLNLPSEMVKGVE----SFKKFYGTK 544
+ K +F+L + VLT+ WP S + + LP + K VE SF+KFY K
Sbjct: 551 REQGDPDKKRFELDINVLTSTMWPMEIMSSSRDGQVELPCIIPKEVETVKQSFEKFYLDK 610
Query: 545 TKARKLTWIYSLGNCHVNGKF-----ELKAIELIVSTYQAACLMLFND 587
RKL+W S+G + F +++ EL VSTY L+LFND
Sbjct: 611 HSGRKLSWQPSMGTADIKATFHRSNGKVQRHELNVSTYAMFILLLFND 658
Score = 302 (111.4 bits), Expect = 2.2e-63, Sum P(3) = 2.2e-63
Identities = 74/191 (38%), Positives = 108/191 (56%)
Query: 562 NGKFELKAIELIVSTYQAACLMLFND---ADRLSFSEILTQLNLNKGDLIRVLHSLSCS- 617
NGK + EL VSTY L+LFND + L+F EI + + DLIR L SL+ +
Sbjct: 635 NGKVQRH--ELNVSTYAMFILLLFNDIPIGESLTFEEIQARTRIPDNDLIRNLQSLAVAP 692
Query: 618 KHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRI--------PLPPVDDRREINEDVGK 669
K ++L K P ++ + +D F FN F ++RI + D R+E E +
Sbjct: 693 KTRVLKKVPMSRDVKPTDKFYFNNDFQSPFMKVRIGVVSGGANKVESQDQRKETEEKMNN 752
Query: 670 DRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERD 729
+R +I+AA+VRIMK RK L + LISE + LS F P++ +K RI+ LI+RE++ER
Sbjct: 753 ERGGSIEAAIVRIMKQRKTLIHSNLISEVLSQLSARFVPDVNMVKRRIESLIDREYLERV 812
Query: 730 SKDPTMFNYSA 740
S+DP + Y A
Sbjct: 813 SEDPPTYGYVA 823
Score = 169 (64.5 bits), Expect = 2.2e-63, Sum P(3) = 2.2e-63
Identities = 59/261 (22%), Positives = 114/261 (43%)
Query: 79 MQSDVLPSFEDKR-GEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQAGLASLIEV 137
MQ + E + GE L + WE+ + + + Y+DR + S+
Sbjct: 103 MQDQFTEATERRETGERFLSALSEVWEDHQICMKMITDVLMYMDRVVALRKV---SIYAA 159
Query: 138 PVVVFRDRVYKD--------LKRDV-RDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI 188
+ +FRD V + + DV + TV+ +I ER G IDRAL+ + + G+
Sbjct: 160 AMALFRDHVLRSPVSSSNNAVVADVLKSTVLFMIQLERSGHMIDRALIHSCIKMLEGLYE 219
Query: 189 LDMD-----FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVY 243
+ + Y FE ++ + +Y + + + + +E++R Y
Sbjct: 220 TEAEEESSKLYLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQY 279
Query: 244 YFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRL---YDETR 300
SESK+ E V +EL+ + +++ E +G R ++ ++ D+LS+I+ L D +
Sbjct: 280 TISLLSESKIKEIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKK 339
Query: 301 TGLEPVAGIFKQYFIDQGKAL 321
T L A + K+ ++ G +
Sbjct: 340 THL--TAAVQKR-IVEMGNEI 357
Score = 43 (20.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 23/101 (22%), Positives = 42/101 (41%)
Query: 236 KERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRL 295
K++DR Y+ +L+ K + + Q++ K +Q L +FR
Sbjct: 482 KDKDRFEAYYKKHLSRRLLMK--RSMSMDAERQMISKMKMEVGNQFTQR----LEAMFR- 534
Query: 296 YDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANM 336
D T + E + +KQ+ +QG + E D+ T+ M
Sbjct: 535 -DMTIS--EDLTASYKQFVREQGDPDKKRFELDINVLTSTM 572
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 175/627 (27%), Positives = 314/627 (50%)
Query: 131 LASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI-- 188
L + E+ + ++R + + L+ + ++ I +R GE ++ ++ ++ FV +
Sbjct: 136 LMEIGELALDMWRKLMIEPLQAILIRMLLREIKNDRCGEDPNQKVIHGVINSFVHVEQYK 195
Query: 189 --LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFH 246
L + FY++ FE +++ G YY ++AS+ + +C +YM K LK E R Y H
Sbjct: 196 KKLPLKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLH 255
Query: 247 TRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPV 306
S K+I + Q ++ H Q L E C +I QEK +D++ ++ L +GL +
Sbjct: 256 PSSYGKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKRNDMANMYTLLRAVSSGLPHM 311
Query: 307 AGIFKQYFIDQG-KALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLF 365
+ + D+G +A + ++E NM V +LE+H KF+ ++ + F
Sbjct: 312 IQELQNHIHDEGLRATSNLSQE-------NMPTQFVESVLEVHSKFVQLINTVLNGDQHF 364
Query: 366 LMALKEAFEVFCN----ESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVL 421
+ AL +A N +SI + LA +CDNL K S A+ +++ VE + I +
Sbjct: 365 MSALDKALTSVVNYREPKSICKAPELLELAKYCDNLLKKS-AKGMTENEVEDKLTSFITV 423
Query: 422 LGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVV 481
Y KD+F +FY + LA+RL+ + D ++ ++KLKQ G FT+K+ M TD+
Sbjct: 424 FKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMS 483
Query: 482 LARENQTALDDWFSSNLNEKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESF 537
++ + ++ F N + +S + VL G+WP + +P E+ K V+ F
Sbjct: 484 VSADLNNKFNN-FIKNQDTIIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMF 542
Query: 538 KKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEIL 597
+ FY RKLTW++ L V + K +V+TYQ A L+ FN+++ +S+ E+
Sbjct: 543 ELFYSQHFSGRKLTWLHYLCTGEVKMNYLCKPYVAMVTTYQMAVLLAFNNSETVSYKELQ 602
Query: 598 TQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPV 657
+N+ +L + + SL K++N + + + + +F N F+ + + +I
Sbjct: 603 DSTQMNEKELTKTIKSLL--DVKMINHDSDKEDVEAESTFSLNMNFSSKRTKFKITTSMQ 660
Query: 658 DDR-REINED---VGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAI 713
D +E+ + V +DR+ + AA+VRIMK+RKVL + LI E + F P I I
Sbjct: 661 KDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMI 720
Query: 714 KSRIDDLINREFIERDSKDPTMFNYSA 740
K I+ LI++++IER ++Y A
Sbjct: 721 KKCIEVLIDKQYIERSQASADEYSYVA 747
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 192/729 (26%), Positives = 350/729 (48%)
Query: 44 YTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQW 103
++ +Y LC + P +RLY + E H++ E + E +L + + W
Sbjct: 39 FSDIYALC-VAYPEP----LGERLYAETKIFLESHVRHLYKRVLESE--EQVLVMYHRYW 91
Query: 104 ENINVMGRWLLRFFEYLDRFYVRS--------QAG---------LASLIEVPVVVFRDRV 146
E + ++ + YL+ Y++ Q G L + E+ + ++R +
Sbjct: 92 EEYSKGADYMDCLYRYLNTQYIKKNKLTEADIQYGYGGVDMNEPLMEIGELALDMWRKLM 151
Query: 147 YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI----LDMDFYRQDFEEQM 202
+ L+ + ++ I +R GE ++ ++ ++ FV + + FY+ F
Sbjct: 152 VEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQGIFVSPF 211
Query: 203 IDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELL 262
+ + G YY ++AS+ + +C +YM K LK E R Y H S +K+I + Q ++
Sbjct: 212 LTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMV 271
Query: 263 VVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQG-KAL 321
H Q L +E C ++I QE+ +D++ ++ L +GL + +++ D+G +A
Sbjct: 272 ADHL-QFLHSE---CHSIIQQERKNDMANMYVLLRAVSSGLPHMIEELQKHIHDEGLRAT 327
Query: 322 VHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCN--E 379
+ +E +M V +LE+H KF+ ++ + F+ AL +A N E
Sbjct: 328 SNLTQE-------HMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYRE 380
Query: 380 SIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKL 439
+ E+LA +CDNL K S A+ +++ VE + I + Y KD+F +FY + L
Sbjct: 381 PKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARML 439
Query: 440 ARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLN 499
A+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++ + ++ F N +
Sbjct: 440 AKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIRNQD 498
Query: 500 EKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESFKKFYGTKTKARKLTWIYS 555
+S + VL G+WP + +P E+ K V+ F+ FY RKLTW++
Sbjct: 499 TVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHY 558
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
L V + K +V+TYQ A L+ FN+++ +S+ E+ +N+ +L + + SL
Sbjct: 559 LCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLL 618
Query: 616 CSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDR-REINED---VGKDR 671
K++N + + I SF N F+ + + +I D +E+ + V +DR
Sbjct: 619 --DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDR 676
Query: 672 RHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSK 731
+ + AA+VRIMK+RKVL + LI E + F P I IK I+ LI++++IER
Sbjct: 677 KMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQA 736
Query: 732 DPTMFNYSA 740
++Y A
Sbjct: 737 SADEYSYVA 745
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 194/732 (26%), Positives = 352/732 (48%)
Query: 44 YTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQW 103
++ +Y LC + P ++LY + E H++ E + E +L + + W
Sbjct: 58 FSDIYALC-VAYPEP----LGEKLYTETKVFLENHVRQLFKRVLESE--EKVLVMYHRYW 110
Query: 104 ENINVMGRWLLRFFEYLDRFYVRS--------QAG---------LASLIEVPVVVFRDRV 146
E + ++ + YL+ +++ Q G L + E+ + ++R +
Sbjct: 111 EEYSKGAEYMDCLYRYLNTQFIKKNKLTEADLQYGYGGVDMNEPLMEIGELALDMWRKLM 170
Query: 147 YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI----LDMDFYRQDFEEQM 202
+ L+ + ++ I +R GE ++ ++ ++ FV + + FY++ FE
Sbjct: 171 IEPLQPMLIGKLLKEIKNDRCGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFEGPF 230
Query: 203 IDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELL 262
+ G YY ++AS+ + +C +YM K LK E R Y H S SK+I + Q ++
Sbjct: 231 LTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEVRCRKYLHPSSYSKVIHECQQRMV 290
Query: 263 VVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQG-KAL 321
H Q L E C+ +I QEK DD++ ++ L +GL + + + D+G +A
Sbjct: 291 ADHL-QFLHGE---CQNIIRQEKRDDMANMYTLLRAVSSGLPHMIQELQVHIHDEGIRAT 346
Query: 322 VHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCN--E 379
++ ++E NM V +LE+H KF+ ++ + F+ AL +A N E
Sbjct: 347 INLSQE-------NMPTLFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYRE 399
Query: 380 SIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKL 439
+ E+LA +CDNL K S A+ +++ VE + I + Y KD+F + Y + L
Sbjct: 400 PKSICKAPELLAKYCDNLLKKS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKIYARML 458
Query: 440 ARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLN 499
A+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++ T L++ F++ +
Sbjct: 459 AKRLIHGLSLSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVS----TDLNNKFNNFIK 514
Query: 500 -EKPQFDLSVM----VLTTGSWP--SYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTW 552
++ DL + VL G+WP +P E+ K V+ F+ FY RKLTW
Sbjct: 515 TQETVVDLGISFQIYVLQAGAWPLTHVPSSTFAIPQELEKSVQMFELFYNQHFSGRKLTW 574
Query: 553 IYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLH 612
++ L V + K +V+TYQ A L+ FN+++ +S+ E+ +N+ +L + +
Sbjct: 575 LHYLCTGEVKMNYLSKPYVAVVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELQKTIK 634
Query: 613 SLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDR-REINED---VG 668
SL K+++ + + I +F FT + + +I D +E+ + V
Sbjct: 635 SLL--DVKMISHDLQKEEIEPESTFSLIMSFTSKRTKFKITTSMQKDTPQELEQTRSAVD 692
Query: 669 KDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIER 728
+DR+ + AA+VRIMK+RKVL + LI E + F P I IK I+ LI++++IER
Sbjct: 693 EDRKMYLQAAIVRIMKARKVLRHNALIQEVINQSKARFNPSISMIKKCIEVLIDKQYIER 752
Query: 729 DSKDPTMFNYSA 740
++Y A
Sbjct: 753 SQSSADEYSYVA 764
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 170/670 (25%), Positives = 327/670 (48%)
Query: 93 EFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR-----SQAGLASLIEVPVVVFRDRVY 147
E L + K W R++ F YL+R++V+ ++ + + + +V + V+
Sbjct: 108 EEQLAAYAKYWTRFTTSARFINHLFGYLNRYWVKLKNRFTETLVYDIYTLCLVSWHHHVF 167
Query: 148 KDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI--LDM-----DFYRQDFEE 200
++ + ++ + ++R E D V+ VD + DM Y+ FE
Sbjct: 168 SHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVDSITSLSFDKTDMTKPNLSSYKTFFET 227
Query: 201 QMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHE 260
I++ +Y +++S ++ + S +Y+ KAE L +E + Y H + L+E + +
Sbjct: 228 NFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLEATE-D 286
Query: 261 LLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKA 320
+L+ ++L N+ + ++ Q +D+ R++RL T GL+P+ F+++ G A
Sbjct: 287 VLIAQHEEVLHNDFA---RMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRSGFA 343
Query: 321 LVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNES 380
V + V + + + +L + V+ F F +L AF N +
Sbjct: 344 AVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDTAFRELVNRN 403
Query: 381 IV-EISSA---EILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYR 436
+V + SS+ E+LA + D++ + S+ + + + VE + +I++ Y + KD+F FY
Sbjct: 404 VVCQRSSSRSPELLAKYADSILRKSN-KNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFYT 462
Query: 437 KKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSS 496
K LA+RL+ ++D + + LSKLK+ G +T+K++ M D+ L++E A W
Sbjct: 463 KLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAF--WQLP 520
Query: 497 NLNEKPQFDLSVMVLTTGSWP-SYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYS 555
+ D S +VL T WP S +LP E+V E F+ +Y + RKL+W++
Sbjct: 521 Q-SRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFH 579
Query: 556 LGNCHVNGKFELKA-IELI--VSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLH 612
L + + + + + VSTYQ L+L+N D ++ E+ L+ L +L+
Sbjct: 580 LSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILN 639
Query: 613 SLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLP-PVDDRR-----EINED 666
K K+L N K + +++ N F RM++IR+ L P+ + E ++
Sbjct: 640 IFL--KAKVLLLGDNDKLGDPNSTYKINENF--RMKKIRVQLNLPIRSEQKQESLETHKT 695
Query: 667 VGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFI 726
+ +DR+ + +A+VRIMK+R+ L + L+ E ++ + F P++ IK ID LI +E++
Sbjct: 696 IEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYL 755
Query: 727 ERDSKDPTMF 736
ER +D ++
Sbjct: 756 ERQGRDEYIY 765
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 70/370 (18%), Positives = 146/370 (39%)
Query: 41 MTLYTIVYDLCS-----IELPSAQDCSYS---QRLYVKYGEVFEEHMQSDVLPSFEDKRG 92
M LYT +++ C+ I + + D + + + LY EE++
Sbjct: 48 MELYTAIHNYCADASKTITVDNFNDQTANVLGEALYNNLVLYLEEYLARLRKECISQTNH 107
Query: 93 EFMLREFVKQWENINVMGRWLLRFFEYLDRFYVR-----SQAGLASLIEVPVVVFRDRVY 147
E L + K W R++ F YL+R++V+ ++ + + + +V + V+
Sbjct: 108 EEQLAAYAKYWTRFTTSARFINHLFGYLNRYWVKLKNRFTETLVYDIYTLCLVSWHHHVF 167
Query: 148 KDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAG 207
++ + ++ + ++R E D V+ VD I + F + D + +
Sbjct: 168 SHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVD-----SITSLSFDKTDMTKPNLSSYK 222
Query: 208 CYY----LRKASSWILNDSCPEYMIKAE--ECLKKERDRAVYYFHTRSESKLIEKVQHE- 260
++ + ++ +S EY+ + LKK R E +L+ HE
Sbjct: 223 TFFETNFIENTKNFYAKESS-EYLASHSITDYLKKAEIRLA------EEEELVRLYLHES 275
Query: 261 ----LLVVHRNQLL-ENEK---SGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQ 312
LL + L+ ++E+ + ++ Q +D+ R++RL T GL+P+ F++
Sbjct: 276 TLKPLLEATEDVLIAQHEEVLHNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEE 335
Query: 313 YFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEA 372
+ G A V + V + + + +L + V+ F F +L A
Sbjct: 336 FVKRSGFAAVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDTA 395
Query: 373 FEVFCNESIV 382
F N ++V
Sbjct: 396 FRELVNRNVV 405
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 166/573 (28%), Positives = 287/573 (50%)
Query: 191 MDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRA--------V 242
+ Y+Q+FE + I D +Y +++ +++ ++ EY+ E L++E R +
Sbjct: 216 LSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNGL 275
Query: 243 YYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTG 302
Y H + + +++ E+L+ ++ E L++ ++ DDL R++ L +
Sbjct: 276 SYLH-ETTADVLKSTCEEVLIEKHLKIFHTEFQN---LLNADRNDDLKRMYSLVALSSKN 331
Query: 303 LEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDH 362
L + I + + + QG + + AN + V IL++H K+ A V F +
Sbjct: 332 LTDLKSILENHILHQGTEAIAKC---CTTDAANDPKTYVQTILDVHKKYNALVLTAFNND 388
Query: 363 KLFLMALKEAFEVFCNESIVEIS-----SAEILATFCDNLFKNSDAEKLSDETVERTMDK 417
F+ AL +A F N ++V I+ S E+LA +CD L K S ++ D+ +E +++
Sbjct: 389 NGFVAALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKS-SKNPEDKELEDNLNQ 447
Query: 418 VIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMI 477
V+V+ Y + KD+F ++Y K LA+RL+ + D + +SKLKQ G +T K++ M
Sbjct: 448 VMVVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMF 507
Query: 478 TDVVLARENQTALDDWFSSNLNEKP---QFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGV 534
D+ ++++ L+ +F L EK + D + VL++GSWP LPSE+ + V
Sbjct: 508 QDIGVSKD----LNSYFKQYLAEKNLTMEIDFGIEVLSSGSWPFQLSNNFLLPSELERSV 563
Query: 535 ESFKKFYGTKTKARKLTWIYSL--GNCHVN-GKFELKAIELIVSTYQAACLMLFNDADRL 591
F +FY + RKL W+Y + G +N + L ST+Q + L+ FND
Sbjct: 564 RQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSF 623
Query: 592 SFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIR 651
+ ++ + +LI+VL L K K+L N +++ + E + ++ RRI
Sbjct: 624 TVQQLQDNTQTQQENLIQVLQILL--KAKVLTSSDNENSLTPESTVELFLDYKNKKRRIN 681
Query: 652 IPLPPVDDRREINEDVGK----DRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFK 707
I P + + E V K DR+ I AA+VRIMK RK L + LISE + LS FK
Sbjct: 682 INQPLKTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFK 741
Query: 708 PEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
P++ IK ID LI +E++ER ++Y A
Sbjct: 742 PKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 180/678 (26%), Positives = 328/678 (48%)
Query: 32 EPPFASEECMTLYTIVYDLC-SIEL-PSAQDCSYS-------QRLYVKYGEVFEEHMQSD 82
E + M YT VYD C S+ PS + + ++LY + + + ++ S+
Sbjct: 34 EKSLTRSQYMRFYTHVYDYCTSVSAAPSGRSSGKTGGAQLVGKKLYDRLEQFLKSYL-SE 92
Query: 83 VLPSFEDKRGE-FMLREFVKQWENINVMGRWLLRFFEYLDRFYVR-----SQAGLASLIE 136
+L F+ GE +L + KQW++ L YL+R +V+ Q G+ +
Sbjct: 93 LLTKFKAISGEEVLLSRYTKQWKSYQFSSTVLDGICNYLNRNWVKRECEEGQKGIYKIYR 152
Query: 137 VPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMD---- 192
+ +V ++ +++ L V V+ I+EER+G+ I+R+LV+ ++ +V + + D
Sbjct: 153 LALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLINRSLVRDVIECYVELSFNEEDTDAE 212
Query: 193 -----FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHT 247
Y+Q+FE + I D +Y +++ +++ ++ EY+ E L++E R V F++
Sbjct: 213 QQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQR-VRGFNS 271
Query: 248 RSE-SKLIEKVQHELLVVHRNQLLENE----KSGCRALISQEKFDDLSRIFRLYDETRTG 302
++ S L E L L+E + + L++ ++ DDL R++ L +
Sbjct: 272 KNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLNADRNDDLKRMYSLVALSSKN 331
Query: 303 LEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDH 362
L + I + + + QG + + AN + V IL++H K+ A V F +
Sbjct: 332 LTDLKSILENHILHQGTEAIAKC---CTTDAANDPKTYVQTILDVHKKYNALVLTAFNND 388
Query: 363 KLFLMALKEAFEVFCNESIVEIS-----SAEILATFCDNLFKNSDAEKLSDETVERTMDK 417
F+ AL +A F N ++V I+ S E+LA +CD L K S ++ D+ +E +++
Sbjct: 389 NGFVAALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKS-SKNPEDKELEDNLNQ 447
Query: 418 VIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMI 477
V+V+ Y + KD+F ++Y K LA+RL+ + D + +SKLKQ G +T K++ M
Sbjct: 448 VMVVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMF 507
Query: 478 TDVVLARENQTALDDWFSSNLNEKP---QFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGV 534
D+ ++++ L+ +F L EK + D + VL++GSWP LPSE+ + V
Sbjct: 508 QDIGVSKD----LNSYFKQYLAEKNLTMEIDFGIEVLSSGSWPFQLSNNFLLPSELERSV 563
Query: 535 ESFKKFYGTKTKARKLTWIYSL--GNCHVN-GKFELKAIELIVSTYQAACLMLFNDADRL 591
F +FY + RKL W+Y + G +N + L ST+Q + L+ FND
Sbjct: 564 RQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSF 623
Query: 592 SFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIR 651
+ ++ + +LI+VL L K K+L N +++ + E + ++ RRI
Sbjct: 624 TVQQLQDNTQTQQENLIQVLQILL--KAKVLTSSDNENSLTPESTVELFLDYKNKKRRIN 681
Query: 652 IPLPPVDDRREINEDVGK 669
I P + + E V K
Sbjct: 682 INQPLKTELKVEQETVHK 699
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 141/447 (31%), Positives = 238/447 (53%)
Query: 186 IGIL-DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
+G+L D+ Y+ FE++ + + Y + + PEY+ L++E DR + Y
Sbjct: 203 LGMLSDLQVYKDSFEQRFLSETTRLYAAEGQRLMQERDVPEYLHHVARRLEEENDRVISY 262
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
++ LI V+ +LL H +L+ G R L+ + + +L+ ++ L+ + + GL
Sbjct: 263 LDQSTQKPLIATVEKQLLGEHMTTILQK---GLRTLLDENRVCELTLLYELFSKVKGGLT 319
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
+ +++Y G V E D + +V ++L+ D+ + CF ++
Sbjct: 320 ALLQSWREYIKSVGAETVCSPERD---------REMVQELLDFKDQMDSVTQSCFQRNES 370
Query: 365 FLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGY 424
F+ A+KEAFE F N+ AE++A + D+ + + E ++E +ER +DK++++ +
Sbjct: 371 FINAMKEAFENFINQR--PNKPAELIAKYVDSKLRAGNKEA-TEEELERILDKIMIIFRF 427
Query: 425 FKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLAR 484
KD+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+EGM D+ L++
Sbjct: 428 IHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSK 487
Query: 485 ENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTK 544
+ + N E +L+V +LT G WPSY ++LP+EMVK E FK FY K
Sbjct: 488 DIMIQFKQYMQ-NQTEPSNIELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVFKLFYLGK 546
Query: 545 TKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNK 604
RKL W +LG+ + +F+ EL VS +Q L++FN++D S EI + +
Sbjct: 547 HSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMFNESDECSVEEIRVATGIEE 606
Query: 605 GDLIRVLHSLSCSKHKILNKEPNTKTI 631
G+L R L SL+C K ++LNK P K +
Sbjct: 607 GELKRTLQSLACGKARVLNKTPRGKEV 633
Score = 298 (110.0 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 84/341 (24%), Positives = 159/341 (46%)
Query: 45 TIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFEDKRGEF-MLREFVK 101
+I Y+L + CSY S LY + +V EEH+Q+ + E+ L+ +
Sbjct: 63 SIQYNLEELYQAVENLCSYKVSPMLYKQLRQVCEEHVQAQIHQFREESLDSLSFLKRMNR 122
Query: 102 QWENINVMGRWLLRFFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVRDT--VI 159
W++ + F +LDR YV + L S+ + + +FR + D R ++
Sbjct: 123 CWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVSDAAVQSRTVQGIL 182
Query: 160 ALIDEEREGEKIDRALVKKAVDIFVGIGIL-DMDFYRQDFEEQMIDDAGCYYLRKASSWI 218
++ ER GE +DR+L++ +G+L D+ Y+ FE++ + + Y + +
Sbjct: 183 EQVERERSGETVDRSLLRSL------LGMLSDLQVYKDSFEQRFLSETTRLYAAEGQRLM 236
Query: 219 LNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCR 278
PEY+ L++E DR + Y ++ LI V+ +LL H +L+ G R
Sbjct: 237 QERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLIATVEKQLLGEHMTTILQK---GLR 293
Query: 279 ALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQ 338
L+ + + +L+ ++ L+ + + GL + +++Y G V E D +
Sbjct: 294 TLLDENRVCELTLLYELFSKVKGGLTALLQSWREYIKSVGAETVCSPERD---------R 344
Query: 339 NLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNE 379
+V ++L+ D+ + CF ++ F+ A+KEAFE F N+
Sbjct: 345 EMVQELLDFKDQMDSVTQSCFQRNESFINAMKEAFENFINQ 385
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 463 (168.0 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 128/450 (28%), Positives = 227/450 (50%)
Query: 191 MDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSE 250
++ Y + FE + I + +Y + +S I P Y+ E L +E +R + Y ++
Sbjct: 235 LNIYTK-FEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTK 293
Query: 251 SKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIF 310
+L+ + +L+ H + +LE G A+++ ++ +DL ++++L + ++ + +
Sbjct: 294 KQLMAVLDRQLIERHVDVILEK---GFNAMVNGDRLEDLGKLYQLLNSVGE-IKKIKESW 349
Query: 311 KQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALK 370
+ Y G +++ E+ E L+ +L+ D+ +S F ++L ALK
Sbjct: 350 QSYIKQTGIQMLNDKEK---------EATLIQDLLDYKDRLDRILSQSFSKNELLTYALK 400
Query: 371 EAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDL 430
E+FE F N + AE++A F D+ K +++S+E +E ++K ++L Y + KD+
Sbjct: 401 ESFEYFINTK--QNKPAELVARFIDSKLKVG-GKRMSEEELETVLNKSLILFRYIQGKDV 457
Query: 431 FAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTAL 490
F FY++ L++RLL DK + D +K+ +SKLK G FT K+E M D+ L+ + +
Sbjct: 458 FEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTECGTTFTAKLEEMFKDIELSNDIMNSF 517
Query: 491 DDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARKL 550
D S ++++ VLT+G+WP LP E ++ E F KFY +K + L
Sbjct: 518 RD--SPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLPKEFLEYQEVFNKFYLSKHNGKTL 575
Query: 551 TWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDA-D--RLSFSEILTQLNLNKGDL 607
W +L C + F EL VS +Q L LFND D LSF +I L +L
Sbjct: 576 KWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFNDVIDGGELSFRDIQANTGLAIPEL 635
Query: 608 IRVLHSLSCSKHKIL-NKEPNTKTISQSDS 636
+ L SL SK IL K+ +T + + S++
Sbjct: 636 KKNLLSLCSSKSDILIQKKSSTSSNTSSNT 665
Score = 218 (81.8 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 45/117 (38%), Positives = 79/117 (67%)
Query: 628 TKTISQSDSFEFNAKFTDRMRRIRIPL----PPVDDRREINEDVGKDRRHNIDAALVRIM 683
TK I ++D+F FN+KF+ ++ +I++ V++ ++ NE++ DR++ +DAA+VRIM
Sbjct: 688 TKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIM 747
Query: 684 KSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K+RK L + LISE V +L F+P+ +K RI+ LI +E++ RD ++ ++NY A
Sbjct: 748 KTRKTLAHNLLISELVSLLK--FQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
Score = 165 (63.1 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 63/291 (21%), Positives = 133/291 (45%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGE--FMLREFV 100
LY +V +LC D + LY K E+H+ + + L+
Sbjct: 94 LYKMVENLCF-------DKILASNLYNKISVQIEKHITLTIKHLVLTMSSDPIIFLKSIN 146
Query: 101 KQWENINVMGRWLLRFFEYLDRFYVRSQAG-LASLIEVPVVVFRDRVYK--DLKRDVRDT 157
W++ + F YLDR YV + + S+ ++ + F + + + +L+R D+
Sbjct: 147 SIWKDHTNQMIMIRSIFLYLDRTYVIQNSNTVKSIWDLGLFYFGNNLSQQSNLERKTIDS 206
Query: 158 VIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSW 217
++ I EREG++IDR L+ V + + I Y + FE + I + +Y + +S
Sbjct: 207 LLYSIRCEREGDEIDRDLIHSLVKMLSSLNI-----YTK-FEIEFIKETNRFYDMEGNSK 260
Query: 218 ILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGC 277
I P Y+ E L +E +R + Y ++ +L+ + +L+ H + +LE G
Sbjct: 261 INEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEK---GF 317
Query: 278 RALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
A+++ ++ +DL ++++L + ++ + ++ Y G +++ E++
Sbjct: 318 NAMVNGDRLEDLGKLYQLLNSVGE-IKKIKESWQSYIKQTGIQMLNDKEKE 367
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 561 (202.5 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 162/569 (28%), Positives = 284/569 (49%)
Query: 191 MDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSE 250
+ Y++ FE M++ +G YY +A+ + S EYM + L+ E RA + H S
Sbjct: 212 LKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQKFLHVSSL 271
Query: 251 SKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIF 310
KL ++ + + + N L S CR ++S+E+ DL ++ + L+P+
Sbjct: 272 PKLRKECEEKFI----NDRLGFIYSECREMVSEERRQDLRNMYVV-------LKPIPDNL 320
Query: 311 KQYFIDQGKALVHQAEEDVRNKTANMEQNL----VGKILELHDKFMAYVSICFGDHKLFL 366
K I L H E ++ +A +N+ V +L++H K+ ++ F + LFL
Sbjct: 321 KSELITT--FLDHIKSEGLQTVSALKGENIHIAFVENMLKVHHKYQELIADVFENDSLFL 378
Query: 367 MALKEAFEVFCNESIVE---ISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLG 423
AL +A N E SAE +A +CD L K S K + +++ + I +
Sbjct: 379 SALDKACASVINRRPTERQPCRSAEYVAKYCDTLLKKS---KTCEAEIDQKLTNNITIFK 435
Query: 424 YFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLA 483
Y + KD++ +FY + LA+RL+ ++ + D ++ +++LKQ G FT K+ M TD+ ++
Sbjct: 436 YIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLHRMFTDISVS 495
Query: 484 RENQTALDDWFSSNLNEKPQ---FDLSVMVLTTGSWP--SYKFFGLNLPSEMVKGVESFK 538
+ L++ F+++L + +L++ VL G+WP S + +P E K ++ F+
Sbjct: 496 VD----LNNKFNTHLKDSNVDLGINLAIKVLQAGAWPLGSTQVIPFAVPQEFEKSIKMFE 551
Query: 539 KFYGTKTKARKLTWIYSLGNCHVNGKFE-LKAIELI-VSTYQAACLMLFNDADRLSFSEI 596
+Y RKLTW++ + CH K LK ++ + TYQ A ++LF D LS EI
Sbjct: 552 DYYHKLFSGRKLTWLHHM--CHGELKLSHLKKSYIVTMQTYQMAIILLFETCDSLSCREI 609
Query: 597 LTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLP- 655
L LN + H + K+LN +++ ++ E N +T++ + +I
Sbjct: 610 QNTLQLNDETFQK--HMQPIIESKLLNA--SSENLAGETRIELNLDYTNKRTKFKISSAL 665
Query: 656 ----PVDDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIK 711
P + IN V +DR+ + AA+VRIMK+RKVL + LI E + + SF P I
Sbjct: 666 QKETPQEVEHTINS-VDEDRKLFLQAAIVRIMKARKVLKHNALIQEVLSLSKVSFTPNIA 724
Query: 712 AIKSRIDDLINREFIERDSKDPTMFNYSA 740
IK ++ LI++++IER + ++Y A
Sbjct: 725 MIKKCVESLIDKQYIERTANSGDEYSYMA 753
Score = 52 (23.4 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 42 TLYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQS----DVLPSFE---DKRGEF 94
T ++ VY LC AQ + RLY + E+H+Q VL E G
Sbjct: 37 TSFSDVYTLCV-----AQPEPMADRLYGETKHFLEQHVQEMLAKKVLIEGECSHSNGGPD 91
Query: 95 MLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQ 128
+L+ + W + ++L + + YL++ +++ Q
Sbjct: 92 LLQRYYITWMEYSQGIKYLHQLYIYLNQQHIKKQ 125
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 127/330 (38%), Positives = 188/330 (56%)
Query: 415 MDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKME 474
+DK++++ + KD+F FY+K LA+RLL K + D +K+ LSKLK G FT+K+E
Sbjct: 2 LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLE 61
Query: 475 GMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGV 534
GM D+ L+++ + N N +L+V +LT G WP+Y ++LP EMVK
Sbjct: 62 GMFKDMELSKDIMIQFKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQ 120
Query: 535 ESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFS 594
E FK FY K RKL W +LG+C + +F+ EL VS +Q L++FN+ + S
Sbjct: 121 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLE 180
Query: 595 EILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPL 654
EI + G+L R L SL+C K ++L K P K I D F N F ++ RI+I
Sbjct: 181 EIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQ 240
Query: 655 ----PPVDDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEI 710
V+++ E V +DR++ IDAA+VRIMK RK L + L+SE L KP
Sbjct: 241 IQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA- 299
Query: 711 KAIKSRIDDLINREFIERDSKDPTMFNYSA 740
+K RI+ LI+R+++ERD ++P +NY A
Sbjct: 300 -DLKKRIESLIDRDYMERDKENPNQYNYIA 328
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 183/729 (25%), Positives = 340/729 (46%)
Query: 41 MTLYTIVYDLCSIE-LPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDK----RGEFM 95
M LY VY++C+ L ++ + S Y ++ E ++++ V+ + D+ G+ +
Sbjct: 29 MMLYDAVYNICTTTTLANSNNNSPEFASEFLYKQL-ENYIRTYVI-AIRDRISACSGDEL 86
Query: 96 LREFVKQWENINVMGRWLLRFFEYLDRFYVRSQA----G-LASLIEVPVVVFRDRVYKDL 150
L + +W+N R F+YL+R +V + G + + ++ + +++ + +
Sbjct: 87 LGKCTIEWDNFKFSTRICNCIFQYLNRNFVSKKVEDKNGEIVEIYKLALDIWKAEFFDNF 146
Query: 151 KRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYY 210
K D ++ LI ER G I+ + V+ + ++D Y+ FE Q +D +Y
Sbjct: 147 KVKTIDAILELILLERCGSTINSTHISSVVEC-----LTELDIYKVSFEPQFLDATKLFY 201
Query: 211 LRKASSWILN--DSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQ 268
++ +LN ++ EYMI E L +E R+ Y + LI+ + +L+ R +
Sbjct: 202 KQE----VLNSKETVIEYMITVENRLFQEEYRSRRYLGPSTNDLLIDSCE-SILISDRLK 256
Query: 269 LLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L +E L+ K + L+R++ L GLE + ++ + +G + + +D
Sbjct: 257 FLHSE---FERLLEARKDEHLTRMYSLCRRVTHGLEDLRVYLEKRILKEGHETLQRLAKD 313
Query: 329 VRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEI---- 384
KT E + K+LE+H+ + ++ F + LF+ +L +A + F + V +
Sbjct: 314 SGLKTTPKEY--ITKLLEVHEIYFNLINKAFDRNALFMQSLDKASKDFIEANAVTMLAPE 371
Query: 385 -----SSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKL 439
SA+ LA +CD L K + K+ DET +DK + +L Y KD+F +Y+
Sbjct: 372 KHRSTRSADYLARYCDQLLKKNS--KVQDETA---LDKALTVLKYISEKDVFQLYYQNWF 426
Query: 440 ARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLN 499
+ R++ + + D ++ F++ L G +T + M+ D ++++ T D +
Sbjct: 427 SERIINNSSASDDAEEKFITNLTATEGLEYTRNLVKMVEDAKISKDLTTEFKD-----IK 481
Query: 500 EKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNC 559
+ D +V++ TTG+WPS + LP E+ ++ F FY R+L W YS
Sbjct: 482 TEKSIDFNVILQTTGAWPSLDQIKIILPRELSTILKEFDTFYNASHNGRRLNWAYSQCRG 541
Query: 560 HVNGK-FELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSK 618
VN K FE K + IV+ Q L LFN+ D + +I + + ++ SL+
Sbjct: 542 EVNSKAFEKKYV-FIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVI 600
Query: 619 HKILNKEP-NTKTISQSDSF-EFNAKFTDRMRRIRIPLP---PVDDRRE--INEDVGKDR 671
+L + N K D+ N K+ ++ R+ + DR + V DR
Sbjct: 601 DPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDR 660
Query: 672 RHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSK 731
++ I A +VRIMK+RK L + LI+E + L F P ++ IK I+ LI + +I R
Sbjct: 661 KYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSEN 720
Query: 732 DPTMFNYSA 740
+ ++ Y A
Sbjct: 721 EHNVYEYLA 729
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 462 (167.7 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 126/431 (29%), Positives = 214/431 (49%)
Query: 323 HQAEEDVRNKTANMEQN-----LVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFC 377
H +E +R T+N+ Q V +LE+H KF+ ++ + F+ AL +
Sbjct: 318 HIHDEGLR-ATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDK------ 370
Query: 378 NESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRK 437
LA +CDNL K S A+ +++ VE + I + Y KD+F +FY +
Sbjct: 371 ------------LAKYCDNLLKKS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYAR 417
Query: 438 KLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSN 497
LA+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++ + ++ F N
Sbjct: 418 MLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIRN 476
Query: 498 LNEKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESFKKFYGTKTKARKLTWI 553
+ +S + VL G+WP + +P E+ K V+ F+ FY RKLTW+
Sbjct: 477 QDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWL 536
Query: 554 YSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHS 613
+ L V + K +V+TYQ A L+ FN+++ +S+ E+ +N+ +L + + S
Sbjct: 537 HYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 596
Query: 614 LSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDR-REINED---VGK 669
L K++N + + I SF N F+ + + +I D +E+ + V +
Sbjct: 597 LL--DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDE 654
Query: 670 DRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERD 729
DR+ + AA+VRIMK+RKVL + LI E + F P I IK I+ LI++++IER
Sbjct: 655 DRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERS 714
Query: 730 SKDPTMFNYSA 740
++Y A
Sbjct: 715 QASADEYSYVA 725
Score = 183 (69.5 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 58/253 (22%), Positives = 122/253 (48%)
Query: 131 LASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI-- 188
L + E+ + ++R + + L+ + ++ I +R GE ++ ++ ++ FV +
Sbjct: 136 LMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYK 195
Query: 189 --LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFH 246
+ FY+ F + + G YY ++AS+ + +C +YM K LK E R Y H
Sbjct: 196 KKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLH 255
Query: 247 TRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPV 306
S +K+I + Q ++ H Q L +E C ++I E+ +D++ ++ L +GL +
Sbjct: 256 PSSYTKVIHECQQRMVADHL-QFLHSE---CHSIIRHERKNDMANMYVLLRAVSSGLPHM 311
Query: 307 AGIFKQYFIDQG-KALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLF 365
+++ D+G +A + +E +M V +LE+H KF+ ++ + F
Sbjct: 312 IEELQRHIHDEGLRATSNLTQE-------HMPTLFVESVLEVHGKFVQLINTVLNGDQHF 364
Query: 366 LMALKEAFEVFCN 378
+ AL + + +C+
Sbjct: 365 MSALDKLAK-YCD 376
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 154/518 (29%), Positives = 258/518 (49%)
Query: 234 LKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIF 293
LK E R Y H S +K+I + Q ++ H Q L E C +I QEK +D++ ++
Sbjct: 8 LKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMY 63
Query: 294 RLYDETRTGLEPVAGIFKQYFIDQG-KALVHQAEEDVRNKTANMEQNLVGKILELHDKFM 352
L TGL + + + D+G +A + +E NM V +LE+H KF+
Sbjct: 64 VLLRAVSTGLPHMIQELQNHIHDEGLRATSNLTQE-------NMPTLFVESVLEVHGKFV 116
Query: 353 AYVSICFGDHKLFLMALKEAFEVFCN--ESIVEISSAEILATFCDNLFKNSDAEKLSDET 410
++ + F+ AL +A N E + E+LA +CDNL K S A+ +++
Sbjct: 117 QLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENE 175
Query: 411 VERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFT 470
VE + I + Y KD+F +FY + LA+RL+ + D ++ ++KLKQ G FT
Sbjct: 176 VEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFT 235
Query: 471 TKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLS--VMVLTTGSWPSYKFFGLN--L 526
+K+ M TD+ ++ + ++ F N + +S + VL G+WP + +
Sbjct: 236 SKLHRMYTDMSVSADLNNKFNN-FIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAI 294
Query: 527 PSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFN 586
P E+ K V+ F+ FY RKLTW++ L V + K +V+TYQ A L+ FN
Sbjct: 295 PQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFN 354
Query: 587 DADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDR 646
+++ +S+ E+ +N+ +L + + SL K++N + + I SF N F+ +
Sbjct: 355 NSETVSYKELQDSTQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSK 412
Query: 647 MRRIRIPLPPVDDR-REINED---VGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEML 702
+ +I D +E+ + V +DR+ + AA+VRIMK+RKVL + LI E +
Sbjct: 413 RTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQS 472
Query: 703 SHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
F P I IK I+ LI++++IER ++Y A
Sbjct: 473 RARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 510
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 180/768 (23%), Positives = 360/768 (46%)
Query: 6 KLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQDCSYSQ 65
+++ +E WA EQ + + + M +YT +Y+ CS SA + +
Sbjct: 4 QITVDELWAECEQTFEDLFLNL----KKGLSRKRYMEIYTKIYNYCS----SANEKALID 55
Query: 66 RLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYV 125
Y+ +V +++ E + +L F QW + L +++ +
Sbjct: 56 -FYIPKVKVLVAQKAVEIMSRSESYPNDALLLFFRNQWNEWKMSSNVLKNLLSPVNKIHS 114
Query: 126 RSQAGLASLI-EVPVVVF-------RDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVK 177
+ +S + VV+ R+ + LK + +++ +I +R G + ++
Sbjct: 115 SDKKTTSSSANQNESVVYSDTLNSWRETAFNPLKNKLSVSLLQIIKNDRTGFSTNLQVLS 174
Query: 178 KAVDIFVGIGILD--MDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLK 235
+++ +V +G ++ Y+ FE+Q + + +Y +++ +I + EYM ++
Sbjct: 175 DSLECYVQLGPEKNKLEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIE 234
Query: 236 KERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRL 295
+E +R Y + KL + + + L+ ++ Q S ++ ++K DL ++ L
Sbjct: 235 QETNRVNQYMPISTLEKLTKILNNVLISNYKEQFA----SKFLDILIEDKSSDLVMMYSL 290
Query: 296 YDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYV 355
L P+ IF + +G + + E +++ + Q L+ +L+++ +F +
Sbjct: 291 LSRVNH-LTPLKNIFSDFIKSEG---LKEIESNLK-EAQEKPQVLISILLKIYSRFNIMI 345
Query: 356 SICFGDHKLFLMALKEAFEVFCNESIV-------EISSAEILATFCDNLFKNSDAEKLSD 408
C+G+ F A+ ++F + NE+ E + +L+ FCD + + +SD
Sbjct: 346 KECYGNDTDFTTAMDKSFSILVNENPASYDPKKKESNIPVVLSKFCDQILRKGP-HHISD 404
Query: 409 ET-VERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGG 467
E +E+ + + + L Y KD+F Y+K L++RL+ D ++D + ++KLK + G
Sbjct: 405 EAELEKKLTEAVCLFKYLPDKDIFMLNYQKMLSKRLVEDLSASEDAETLMINKLKNYQGF 464
Query: 468 HFTTKMEGMITDVVLARENQTALDDWFSSNLNEKP---QFDLSVMVLTTGSWP---SYKF 521
+ TK+ MITD+ L ++ ++ F ++LNEK + + VLT GSW
Sbjct: 465 DYCTKLTRMITDMRLCKD----ININFQNHLNEKSLTLPYQFNFYVLTNGSWTLTNKQTA 520
Query: 522 FGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGK-FELKAIELIVSTYQAA 580
PSEM+ + F+ FY + R LT++Y V+ + + K +L + YQ A
Sbjct: 521 TPFKPPSEMLSSITYFESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMA 580
Query: 581 CLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILN-KEPNTKTISQSDSFEF 639
L++FN AD+++ I + L++ IR L L+ K I+ EP+ K + F
Sbjct: 581 ILLMFNGADKITRFLINDTIGLDETS-IR-LPLLALIKTGIIECSEPSFKNWNNDTEFTV 638
Query: 640 NAKFTDRMRRIRIPLP-PVDDRRE------INE-DVGKDRRHNIDAALVRIMKSRKVLGY 691
N+KF+ + ++ + + + ++ ++E ++ K+R + AA+VRIMKS+K + +
Sbjct: 639 NSKFSSKKMKVSCNIAVQIGETKQSEGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTH 698
Query: 692 QQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKD-PTMFNY 738
L E +S F P+I AIK I+ LI++E+I R + D P+ Y
Sbjct: 699 NDLTVETTTQVSKWFTPKITAIKKAIEYLIDQEYIRRTTDDNPSARKY 746
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 560 (202.2 bits), Expect = 8.1e-54, P = 8.1e-54
Identities = 175/695 (25%), Positives = 332/695 (47%)
Query: 67 LYVKYGEVFEEHMQS-DVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYV 125
+ V++ + +E + + + +P ED ++ L +F + W+ V + F +LDR +
Sbjct: 168 IVVQFAKSLKESLNAVEQVPLAEDNCEQY-LEKFGQIWQAYPVKINLIRNIFLHLDRIAL 226
Query: 126 -RSQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFV 184
+ + L E + +F+ + ++ ++ + T + + + R V + V
Sbjct: 227 GATDTEILPLWECFMQIFQKTFFPNIFKEFKATKLFNALYMAMQKIMQRYPVDSPLRSLV 286
Query: 185 GIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
+ L ++F + +I +Y + + +C +YM E+ + +
Sbjct: 287 DM--LQTVHVSEEFAKFLISQLREHYNNERIDKVPKMNCNDYMEYCEDQINRYSQLVKVN 344
Query: 245 FHTRSESKLIEKVQHELLVVHR-NQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGL 303
F S K ++ L+ ++L ++ LI + D+ R+F L + G
Sbjct: 345 FDEPSALKDVQATVTNCLIQQAIPEILTHDFDD---LIDSDNISDIGRMFNLCRQCVGGE 401
Query: 304 EPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICF---G 360
+ V F +Y +G+ L+ ++ +LV ++L K ++ F
Sbjct: 402 DEVRTQFSKYLKKRGEKLIATCPDE----------DLVSELLAFKKKVDFIMTGSFKSAN 451
Query: 361 DHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIV 420
D L +AFE F N+ + SAE+++ L +S+ D T+++ +D+ IV
Sbjct: 452 DPVKMRQCLSDAFESFVNKQVDR--SAELISKHFHTLLHSSNKNVSDDTTLDQMVDEAIV 509
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDV 480
L Y + KD+F +Y++ LA+RL ++ + D +K L KLK G FT K+EGM D+
Sbjct: 510 LFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDM 569
Query: 481 VLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKF 540
A EN L + + ++N K + + + V+T WP+Y + +N+P EM + ++ F
Sbjct: 570 D-ASENYGRLFNQYLEHMN-KEKANFTARVITPEYWPTYDTYEINIPKEMRDTLTDYQDF 627
Query: 541 YGTKTKARKLTWIYSLGNCHVNGKFELKAI-ELIVSTYQAACLMLFNDADRLSFSEILTQ 599
Y + R + W + L + ++ F ELI + YQ L+LFN + + +EI+
Sbjct: 628 YRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVEH 687
Query: 600 LNLNKGDLIR-VLHSLSC-SKHKILNK------EPNTKTIS--QSDSFEFNAKFTDRMRR 649
+ + ++++ VL L K K+L + E T+ +++ F N+KFT++ R
Sbjct: 688 TKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKRCR 747
Query: 650 IRIPL----PPVDDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHS 705
+RI V++ +E+ E+V DR++ IDAA+VRIMK+RK L +Q L++E ++ L
Sbjct: 748 VRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQLR-- 805
Query: 706 FKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
F IK R++ LI RE+I RD ++ + +NY A
Sbjct: 806 FPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 360 (131.8 bits), Expect = 9.0e-53, Sum P(3) = 9.0e-53
Identities = 99/331 (29%), Positives = 159/331 (48%)
Query: 193 FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESK 252
FY++ FE+ ++ D YY A + + SC EYM + L++E RA Y H S K
Sbjct: 294 FYQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEK 353
Query: 253 LIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQ 312
+I Q ++ H+++L + C LI+ E+ DL ++RL + GL + F++
Sbjct: 354 VITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEE 409
Query: 313 YFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEA 372
Y +G V + + N+ Q V +L +++KF + F D F L +A
Sbjct: 410 YVKKKGLEAVSRLTGE------NVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKA 463
Query: 373 FEVFCN--ESIVEISSA-EILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
+ N E + A E LA + D L K S + LS+ +E +D IV+ Y + KD
Sbjct: 464 LQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIEDKD 522
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F +FY K LA RL+ + D ++ ++KLKQ G FT+K+ M TD+ L++E
Sbjct: 523 IFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNN 582
Query: 490 LDDWFSSNLNEKPQFDL---SVMVLTTGSWP 517
D + +P M+L GSWP
Sbjct: 583 FDKHIADIKTVQPDVKFVPTQTMILQAGSWP 613
Score = 229 (85.7 bits), Expect = 9.0e-53, Sum P(3) = 9.0e-53
Identities = 58/215 (26%), Positives = 109/215 (50%)
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLML 584
+LP + ++ F+KFY K RKLTW++++ V + K + YQ A L+
Sbjct: 635 HLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLC 694
Query: 585 FNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSF-EFNAKF 643
F D + +I ++ ++ L++ + ++ +L + T +DS N
Sbjct: 695 FERRDAILVKDIGEEIGVSGDYLLKTIRTIL--DVTLLTCDDQNLT---ADSLVRLNMSM 749
Query: 644 TDRMRRIRIPLPPVD-----DRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISEC 698
T + + R+ P V+ ++ + V +DR++ ++ A+VRIMK+RKVL + L++E
Sbjct: 750 TSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEI 809
Query: 699 VEMLSHSFKPEIKAIKSRIDDLINREFIER-DSKD 732
++ F P++ IK I+DLI + +I+R D D
Sbjct: 810 MDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQND 844
Score = 83 (34.3 bits), Expect = 9.0e-53, Sum P(3) = 9.0e-53
Identities = 21/85 (24%), Positives = 44/85 (51%)
Query: 44 YTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQW 103
++ VYD+C + +P+ S+RLY + +EH++ D + +L+E+ K W
Sbjct: 116 FSDVYDIC-VSIPTP----LSERLYNEVKACIQEHVRQK-RQDIVDVDPDLLLQEYHKMW 169
Query: 104 ENINVMGRWLLRFFEYLDRFYVRSQ 128
+ ++ R F YL++ +V+ +
Sbjct: 170 RVFHEGAIFIHRLFGYLNKQFVKQK 194
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 360 (131.8 bits), Expect = 9.0e-53, Sum P(3) = 9.0e-53
Identities = 99/331 (29%), Positives = 159/331 (48%)
Query: 193 FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESK 252
FY++ FE+ ++ D YY A + + SC EYM + L++E RA Y H S K
Sbjct: 294 FYQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEK 353
Query: 253 LIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQ 312
+I Q ++ H+++L + C LI+ E+ DL ++RL + GL + F++
Sbjct: 354 VITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEE 409
Query: 313 YFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEA 372
Y +G V + + N+ Q V +L +++KF + F D F L +A
Sbjct: 410 YVKKKGLEAVSRLTGE------NVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKA 463
Query: 373 FEVFCN--ESIVEISSA-EILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
+ N E + A E LA + D L K S + LS+ +E +D IV+ Y + KD
Sbjct: 464 LQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIEDKD 522
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
+F +FY K LA RL+ + D ++ ++KLKQ G FT+K+ M TD+ L++E
Sbjct: 523 IFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNN 582
Query: 490 LDDWFSSNLNEKPQFDL---SVMVLTTGSWP 517
D + +P M+L GSWP
Sbjct: 583 FDKHIADIKTVQPDVKFVPTQTMILQAGSWP 613
Score = 229 (85.7 bits), Expect = 9.0e-53, Sum P(3) = 9.0e-53
Identities = 58/215 (26%), Positives = 109/215 (50%)
Query: 525 NLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLML 584
+LP + ++ F+KFY K RKLTW++++ V + K + YQ A L+
Sbjct: 635 HLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLC 694
Query: 585 FNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSF-EFNAKF 643
F D + +I ++ ++ L++ + ++ +L + T +DS N
Sbjct: 695 FERRDAILVKDIGEEIGVSGDYLLKTIRTIL--DVTLLTCDDQNLT---ADSLVRLNMSM 749
Query: 644 TDRMRRIRIPLPPVD-----DRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISEC 698
T + + R+ P V+ ++ + V +DR++ ++ A+VRIMK+RKVL + L++E
Sbjct: 750 TSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEI 809
Query: 699 VEMLSHSFKPEIKAIKSRIDDLINREFIER-DSKD 732
++ F P++ IK I+DLI + +I+R D D
Sbjct: 810 MDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQND 844
Score = 83 (34.3 bits), Expect = 9.0e-53, Sum P(3) = 9.0e-53
Identities = 21/85 (24%), Positives = 44/85 (51%)
Query: 44 YTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQW 103
++ VYD+C + +P+ S+RLY + +EH++ D + +L+E+ K W
Sbjct: 116 FSDVYDIC-VSIPTP----LSERLYNEVKACIQEHVRQK-RQDIVDVDPDLLLQEYHKMW 169
Query: 104 ENINVMGRWLLRFFEYLDRFYVRSQ 128
+ ++ R F YL++ +V+ +
Sbjct: 170 RVFHEGAIFIHRLFGYLNKQFVKQK 194
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 154/577 (26%), Positives = 281/577 (48%)
Query: 131 LASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI-- 188
L + E+ + ++R + + L+ + ++ I +R GE ++ ++ ++ FV +
Sbjct: 136 LMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYK 195
Query: 189 --LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFH 246
+ FY++ FE + + G YY ++AS+ + +C +YM K LK E R Y H
Sbjct: 196 KKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLH 255
Query: 247 TRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPV 306
S +K+I + Q ++ H Q L E C +I QEK +D++ ++ L TGL +
Sbjct: 256 PSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHM 311
Query: 307 AGIFKQYFIDQG-KALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLF 365
+ + D+G +A + +E NM V +LE+H KF+ ++ + F
Sbjct: 312 IQELQNHIHDEGLRATSNLTQE-------NMPTLFVESVLEVHGKFVQLINTVLNGDQHF 364
Query: 366 LMALKEAFEVFCN--ESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLG 423
+ AL +A N E + E+LA +CDNL K S A+ +++ VE + I +
Sbjct: 365 MSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDRLTSFITVFK 423
Query: 424 YFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLA 483
Y KD+F +FY + LA+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++
Sbjct: 424 YIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVS 483
Query: 484 RENQTALDDWFSSNLNEKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESFKK 539
+ ++ F N + +S + VL G+WP + +P E+ K V+ F+
Sbjct: 484 ADLNNKFNN-FIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFEL 542
Query: 540 FYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQ 599
FY RKLTW++ L V + K +V+TYQ A L+ FN+++ +S+ E+
Sbjct: 543 FYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDS 602
Query: 600 LNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDD 659
+N+ +L + + SL K++N + + I SF N F+ + + +I D
Sbjct: 603 TQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKD 660
Query: 660 RREINEDVGKDR-RHNIDAALVRIMKSRKVLGYQQLI 695
++ + + R R N ++++ K +VL +Q I
Sbjct: 661 TPQV---ISQSRARFNPSISMIK--KCIEVLIDKQYI 692
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 518 (187.4 bits), Expect = 2.1e-49, P = 2.1e-49
Identities = 168/681 (24%), Positives = 319/681 (46%)
Query: 44 YTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQW 103
++ +Y LC + P +RLY + E H++ E + E +L + + W
Sbjct: 39 FSDIYALC-VAYPEP----LGERLYAETKIFLENHVRHLYKRVLESE--EQVLVMYHRYW 91
Query: 104 ENINVMGRWLLRFFEYLDRFYVRS--------QAG---------LASLIEVPVVVFRDRV 146
E + ++ + YL+ Y++ Q G L + E+ + ++R +
Sbjct: 92 EEYSKGADYMDCLYRYLNTQYIKKNKLTEADLQYGYGGVDMNEPLMEIGELALDMWRKLM 151
Query: 147 YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGI----LDMDFYRQDFEEQM 202
+ L+ + ++ I +R GE ++ ++ ++ FV + + FY+ F
Sbjct: 152 VEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQGIFVSPF 211
Query: 203 IDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELL 262
+ + G YY ++AS+ + +C +YM K LK E R Y H S +K+I + Q ++
Sbjct: 212 LTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMV 271
Query: 263 VVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQG-KAL 321
H Q L +E C ++I E+ +D++ ++ L +GL + +++ D+G +A
Sbjct: 272 ADHL-QFLHSE---CHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRHIHDEGLRAT 327
Query: 322 VHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCN--E 379
+ +E +M V +LE+H KF+ ++ + F+ AL +A N E
Sbjct: 328 SNLTQE-------HMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYRE 380
Query: 380 SIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKL 439
+ E+LA +CDNL K S A+ +++ VE + I + Y KD+F +FY + L
Sbjct: 381 PKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARML 439
Query: 440 ARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLN 499
A+RL+ + D ++ ++KLKQ G FT+K+ M TD+ ++ + ++ F N +
Sbjct: 440 AKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIRNQD 498
Query: 500 EKPQFDLS--VMVLTTGSWPSYKFFGLN--LPSEMVKGVESFKKFYGTKTKARKLTWIYS 555
+S + VL G+WP + +P E+ K V+ F+ FY RKLTW++
Sbjct: 499 TVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHY 558
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
L V + K +V+TYQ A L+ FN+++ +S+ E+ +N+ +L + + SL
Sbjct: 559 LCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLL 618
Query: 616 CSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVGKDR-RHN 674
K++N + + I SF N F+ + + +I D ++ + + R R N
Sbjct: 619 --DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQV---ISQSRARFN 673
Query: 675 IDAALVRIMKSRKVLGYQQLI 695
++++ K +VL +Q I
Sbjct: 674 PSISMIK--KCIEVLIDKQYI 692
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 516 (186.7 bits), Expect = 6.7e-48, P = 6.7e-48
Identities = 160/731 (21%), Positives = 340/731 (46%)
Query: 41 MTLYTIVYDLCSIE-----LPSAQDCSYSQRLYVKYG-EVFE--EHMQSDVLPSFEDKRG 92
M YT VY+ C + P + + Y G E+++ E ++ + + +
Sbjct: 40 MNCYTAVYNYCVNKSRRGTTPVSISNNSDNNSYSLAGAEIYKKLEEYLTEFIKNLKRLPN 99
Query: 93 EFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQA--GLASLIEVPVVVF---RDRVY 147
E L +V++W + ++ F+Y++R++V+ + G + +V + F +D ++
Sbjct: 100 ESFLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKERSDGRKDVYDVNTLSFIKWKDEMF 159
Query: 148 KDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD--IFVGIGILDMD-----FYRQDFEE 200
K + + + ++ I ++R+ +D L+ A+ +F+ I I D+ Y FE
Sbjct: 160 KPNSKLLIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDIQDLKKPNLIIYVNSFEI 219
Query: 201 QMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHE 260
++ YY +++++++ + + +YM K E + +E R+ Y R++ L+E +
Sbjct: 220 PFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKPLLEVLNAA 279
Query: 261 LLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKA 320
L+ H N++ + L+ Q + D + R+++L + L+P+A + Y + A
Sbjct: 280 LIEKHANEMYDQ----FLVLLEQNQIDHIQRMYKLLARVQKTLDPLANTLELYIKKEAAA 335
Query: 321 LVHQAEEDVRNKTAN---MEQNL-VGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVF 376
+ + + N A +E + V ++ ++++F V F F+ +L A F
Sbjct: 336 ALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKSLDNACRHF 395
Query: 377 CNESIVEIS-------SAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
N + + + E+LA + D K++ + E D ++++ + +D
Sbjct: 396 VNNNPIATPKPRSPCRTPELLARYADGFLKSNSKDN------EMNADNLMIVFKFIAERD 449
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
F E YR+ LA+RL+ +++ +++ + +L++ + +T+KM M TD+ + +
Sbjct: 450 SFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKASDD---- 505
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWP---SYKFFGLNLPSEMVKGVESFKKFYGTKTK 546
L F +N FD S MVL +WP S + L L E+ ++SFK Y + K
Sbjct: 506 LKIKFKDGMNVL--FDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYLQQGK 563
Query: 547 ARKLTWIYSLGNCHVNGKFEL----KAIELIVSTYQAACLMLFNDADRLSFSEILTQLNL 602
+++ W+++ G + K IVS Q L+ +N + + +++ + +
Sbjct: 564 GKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKTYTLDDLVKIVGI 623
Query: 603 NKGDLIRVLHSLSCSKHKILNKEPNTKTI-SQSDSFEFNAKFTDRMRRIRIPLPPVDDRR 661
K +L++ H K+K+L +E + I S + F + + + +D
Sbjct: 624 KK-ELLQN-HVTPFVKYKLLKEEGDQLVIVDHYPSKKNKVSFIGAITKTK-----EEDVE 676
Query: 662 EINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLI 721
EI ++V + R ++A++VRIMKS+K + L++E V + F + +K ID LI
Sbjct: 677 EITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNIDVKRAIDSLI 736
Query: 722 NREFIERDSKD 732
++E+++R+ D
Sbjct: 737 DKEYLKRNGDD 747
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 516 (186.7 bits), Expect = 6.7e-48, P = 6.7e-48
Identities = 160/731 (21%), Positives = 340/731 (46%)
Query: 41 MTLYTIVYDLCSIE-----LPSAQDCSYSQRLYVKYG-EVFE--EHMQSDVLPSFEDKRG 92
M YT VY+ C + P + + Y G E+++ E ++ + + +
Sbjct: 40 MNCYTAVYNYCVNKSRRGTTPVSISNNSDNNSYSLAGAEIYKKLEEYLTEFIKNLKRLPN 99
Query: 93 EFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQA--GLASLIEVPVVVF---RDRVY 147
E L +V++W + ++ F+Y++R++V+ + G + +V + F +D ++
Sbjct: 100 ESFLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKERSDGRKDVYDVNTLSFIKWKDEMF 159
Query: 148 KDLKRDVRDTVIALIDEEREGEKIDRALVKKAVD--IFVGIGILDMD-----FYRQDFEE 200
K + + + ++ I ++R+ +D L+ A+ +F+ I I D+ Y FE
Sbjct: 160 KPNSKLLIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDIQDLKKPNLIIYVNSFEI 219
Query: 201 QMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHE 260
++ YY +++++++ + + +YM K E + +E R+ Y R++ L+E +
Sbjct: 220 PFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKPLLEVLNAA 279
Query: 261 LLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKA 320
L+ H N++ + L+ Q + D + R+++L + L+P+A + Y + A
Sbjct: 280 LIEKHANEMYDQ----FLVLLEQNQIDHIQRMYKLLARVQKTLDPLANTLELYIKKEAAA 335
Query: 321 LVHQAEEDVRNKTAN---MEQNL-VGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVF 376
+ + + N A +E + V ++ ++++F V F F+ +L A F
Sbjct: 336 ALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKSLDNACRHF 395
Query: 377 CNESIVEIS-------SAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
N + + + E+LA + D K++ + E D ++++ + +D
Sbjct: 396 VNNNPIATPKPRSPCRTPELLARYADGFLKSNSKDN------EMNADNLMIVFKFIAERD 449
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTA 489
F E YR+ LA+RL+ +++ +++ + +L++ + +T+KM M TD+ + +
Sbjct: 450 SFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKASDD---- 505
Query: 490 LDDWFSSNLNEKPQFDLSVMVLTTGSWP---SYKFFGLNLPSEMVKGVESFKKFYGTKTK 546
L F +N FD S MVL +WP S + L L E+ ++SFK Y + K
Sbjct: 506 LKIKFKDGMNVL--FDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYLQQGK 563
Query: 547 ARKLTWIYSLGNCHVNGKFEL----KAIELIVSTYQAACLMLFNDADRLSFSEILTQLNL 602
+++ W+++ G + K IVS Q L+ +N + + +++ + +
Sbjct: 564 GKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKTYTLDDLVKIVGI 623
Query: 603 NKGDLIRVLHSLSCSKHKILNKEPNTKTI-SQSDSFEFNAKFTDRMRRIRIPLPPVDDRR 661
K +L++ H K+K+L +E + I S + F + + + +D
Sbjct: 624 KK-ELLQN-HVTPFVKYKLLKEEGDQLVIVDHYPSKKNKVSFIGAITKTK-----EEDVE 676
Query: 662 EINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLI 721
EI ++V + R ++A++VRIMKS+K + L++E V + F + +K ID LI
Sbjct: 677 EITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNIDVKRAIDSLI 736
Query: 722 NREFIERDSKD 732
++E+++R+ D
Sbjct: 737 DKEYLKRNGDD 747
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 513 (185.6 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 146/538 (27%), Positives = 259/538 (48%)
Query: 209 YYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFH-TRSESKLIEKVQHELLVVHRN 267
+Y ++S I EY+ A L++E D V F R + + E VQ L+ H +
Sbjct: 214 FYDTESSQKIQELPLEEYLEYAMSSLERE-DAYVEKFDIVRDKKSIRETVQRCLITSHLD 272
Query: 268 QLLENEKSGCRALISQEKFDDLSRIFRLYD---ETRTGLEPVAGIFKQYFIDQGKALVHQ 324
L + G I + ++ L ET ++P + +D G LV+
Sbjct: 273 TLTK----GISQFIEKRDAHSCKLLYALLQFNHETEYLIQP----WSDCLVDVGFKLVND 324
Query: 325 AEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCN--ESIV 382
+D LV ++L H V F + A+++AFE F N +
Sbjct: 325 ESKD---------DTLVQELLSFHKFLQVVVDESFLHDETLSYAMRKAFETFINGAKGSQ 375
Query: 383 EISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARR 442
+ A ++A + D L + + + + ++ +++ L Y KD+F +Y+ +A+R
Sbjct: 376 REAPARLIAKYIDYLLRVGE-QASGGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKR 434
Query: 443 LLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTAL-DDWFSSNLNEK 501
LL +K + + L LK+ G FT +EGM DV +++E ++ + NL+
Sbjct: 435 LLLNKSASAQNELMLLDMLKKTCGSQFTHSLEGMFRDVNISKEFTSSFRHSKAAHNLHR- 493
Query: 502 PQFDLSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHV 561
DL V VL+ WPSY + LP +M + ++ F+KFY +K +K++W SLG+C V
Sbjct: 494 ---DLYVNVLSQAYWPSYPESHIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIV 550
Query: 562 NGKFELKAIELIVSTYQAACLMLFNDA---DRLSFSEILTQLNLNKGDLIRVLHSLSCSK 618
+F L EL +S +QA L+ FN+ + +S+ ++ L+ DL R L SLSC++
Sbjct: 551 KARFPLGNKELSISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCAR 610
Query: 619 HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDRREINEDVG----KDRRHN 674
+ L P +K S F N KFTD++ R++I + + R+ N DV +DR+
Sbjct: 611 IRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQIYLKEERQENSDVQEQVVRDRQFE 670
Query: 675 IDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKD 732
+ A++VR+MK ++ + + L+ + + P + +K+ I+ L+ +E++ER+ D
Sbjct: 671 LQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLEREDND 728
Score = 178 (67.7 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 89/431 (20%), Positives = 178/431 (41%)
Query: 74 VFEEHMQSDVLPSFEDKRGEFMLREFVKQWEN-----INVMGRWLLR------FFEYLDR 122
+ + HM S + +D F+ E + N + +WL R F Y+D+
Sbjct: 72 ILQHHMSSGI-QLLKDSAESFIQLEGTETDTNACTVVVGCWNKWLERVEIVQNIFYYMDK 130
Query: 123 FYVRSQAGLASLIEVPVVVFRDRVY--KDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
++ ++ E+ + +FR+++ K+++ ++++ + + D A ++ A+
Sbjct: 131 TFLSHHPDYPTIEELSLSLFREKLMAVKNIQIPFLNSLLQSFENLHSSKSTDHAYLQDAM 190
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
+ + + Y F + +Y ++S I EY+ A L++E D
Sbjct: 191 -----LMLHRTEMYSSVFVPMYLVMLSRFYDTESSQKIQELPLEEYLEYAMSSLERE-DA 244
Query: 241 AVYYFH-TRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYD-- 297
V F R + + E VQ L+ H + L + G I + ++ L
Sbjct: 245 YVEKFDIVRDKKSIRETVQRCLITSHLDTLTK----GISQFIEKRDAHSCKLLYALLQFN 300
Query: 298 -ETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILEL--HDKFMAY 354
ET ++P + +D G LV+ +D T E K L++ + F+
Sbjct: 301 HETEYLIQP----WSDCLVDVGFKLVNDESKD---DTLVQELLSFHKFLQVVVDESFLHD 353
Query: 355 VSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERT 414
++ + K F E F S E + A ++A + D L + + + + ++
Sbjct: 354 ETLSYAMRKAF-----ETFINGAKGSQRE-APARLIAKYIDYLLRVGE-QASGGKPLKEV 406
Query: 415 MDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKME 474
+++ L Y KD+F +Y+ +A+RLL +K + + L LK+ G FT +E
Sbjct: 407 FSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHSLE 466
Query: 475 GMITDVVLARE 485
GM DV +++E
Sbjct: 467 GMFRDVNISKE 477
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 428 (155.7 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 132/552 (23%), Positives = 256/552 (46%)
Query: 75 FEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQ-AGLAS 133
F + Q+ VL S +D +L+ ++ +W L + F L+ + Q + S
Sbjct: 68 FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGSNKKS 124
Query: 134 LIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIG 187
+E +V + + ++ ++K ++D+ + L+ ER GE D LV + +V +
Sbjct: 125 NVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLC 184
Query: 188 ILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
D YR +FE+ +D +Y +A S++ + YM A+ LK+E RA+ Y
Sbjct: 185 SNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRY 244
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
TR E +E + + E + C+ +I + + + L +F L D+ G+E
Sbjct: 245 LETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIE 304
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
P+ +++ + G A + A E + T + E+ V ++L L ++F V F D
Sbjct: 305 PMLKDLEEHIVSAGLADMVAAAETI---TTDSEK-YVEQLLTLFNRFSKLVKEAFQDDPR 360
Query: 365 FLMALKEAFEVFCNESIV------------------EISSAEILATFCDNLFKNSD-AEK 405
FL A +A++ N++ + E E+LA +CD L + + ++K
Sbjct: 361 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 420
Query: 406 LSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS 465
L+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L++
Sbjct: 421 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 480
Query: 466 -GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--SYKFF 522
+ K+ M D+ ++ + A + +N P +++ +L G+W S K F
Sbjct: 481 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 540
Query: 523 GLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACL 582
++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q A L
Sbjct: 541 -VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVL 599
Query: 583 MLFNDADRLSFS 594
+N R S
Sbjct: 600 FAWNQRPREKIS 611
Score = 269 (99.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 79/314 (25%), Positives = 150/314 (47%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 360 RFLTARDK--AYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP 416
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 417 LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 476
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + A + +N P +++ +L G+W S
Sbjct: 477 REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS 536
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 537 EKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 595
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L EP K
Sbjct: 596 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKD 655
Query: 631 ISQSDSFEFNAKFT 644
++ F N +F+
Sbjct: 656 FTEGTLFSVNQEFS 669
Score = 138 (53.6 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 41/114 (35%), Positives = 60/114 (52%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+++Q S NAK R + I R+ L R E NE + + R A+++IMK R
Sbjct: 663 SVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 722
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +I+ LI ++I RD D F Y A
Sbjct: 723 KKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 776
Score = 40 (19.1 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 316 DQGKALVHQA-EEDV 329
D+G A +HQA +ED+
Sbjct: 51 DKGPAKIHQALKEDI 65
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 500 (181.1 bits), Expect = 1.0e-46, P = 1.0e-46
Identities = 132/464 (28%), Positives = 234/464 (50%)
Query: 162 IDEEREGEKIDRALVKKAVDIFVGIGI----LDMDFYRQDFEEQMIDDAGCYYLRKASSW 217
++ +R GE ++ ++ ++ FV + L + FY++ FE +++ G YY ++AS+
Sbjct: 195 LEFDRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEASNL 254
Query: 218 ILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGC 277
+ +C +YM K LK E R Y H S K+I + Q ++ H Q L E C
Sbjct: 255 LQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQRMVADHL-QFLHAE---C 310
Query: 278 RALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQG-KALVHQAEEDVRNKTANM 336
+I QEK +D++ ++ L +GL + + + D+G +A + ++E NM
Sbjct: 311 HNIIRQEKRNDMANMYTLLRAVSSGLPHMIQELQNHIHDEGLRATSNLSQE-------NM 363
Query: 337 EQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCN--ESIVEISSAEILATFC 394
V +LE+H KF+ ++ + F+ AL +A N E + E+LA +C
Sbjct: 364 PTQFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELLAKYC 423
Query: 395 DNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYD 454
DNL K S A+ +++ VE + I + Y KD+F +FY + LA+RL+ + D +
Sbjct: 424 DNLLKKS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSE 482
Query: 455 KTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLS--VMVLT 512
+ ++KLKQ G FT+K+ M TD+ ++ + ++ F N + +S + VL
Sbjct: 483 EAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIKNQDTIIDLGISFQIYVLQ 541
Query: 513 TGSWPSYKFFGLN--LPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAI 570
G+WP + +P E+ K V+ F+ FY RKLTW++ L V + K
Sbjct: 542 AGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLCKPY 601
Query: 571 ELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSL 614
+V+TYQ A L+ FN+++ +S+ E+ +N+ +L + + SL
Sbjct: 602 VAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL 645
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 416 (151.5 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 131/552 (23%), Positives = 252/552 (45%)
Query: 75 FEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQ-AGLAS 133
F + Q+ VL S +D +L+ ++ +W L + F L+ + Q + S
Sbjct: 72 FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGSSKKS 128
Query: 134 LIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIG 187
+E +V + + ++ ++K ++D+ + L+ ER GE D LV + +V +
Sbjct: 129 NVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLC 188
Query: 188 ILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
D YR +FE+ +D +Y +A S++ + YM A+ L++E RA+ Y
Sbjct: 189 SNPEDKLQIYRDNFEKSYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLREEEKRALRY 248
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
TR E ++ + + E + C +I + + D L +F L D+ G+E
Sbjct: 249 LETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLMDKVPNGIE 308
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
P+ +++ I G A + A E + T + E+ V ++L L ++F V F D
Sbjct: 309 PMLKDLEEHIISAGLADMVAAAETI---TTDSEK-YVEQLLTLFNRFSKLVKEAFQDDPR 364
Query: 365 FLMALKEAFEVFCNESIV------------------EISSAEILATFCDNLFKNSD-AEK 405
FL A +A++ N++ + E E+LA +CD L + + ++K
Sbjct: 365 FLTARDKAYKAVVNDATIFKLELPMKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 424
Query: 406 LSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS 465
L+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L++
Sbjct: 425 LTSEDIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 484
Query: 466 -GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--SYKFF 522
+ K+ M D+ ++ + + N P +++ +L G+W S K F
Sbjct: 485 MPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSSEKVF 544
Query: 523 GLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACL 582
++LP+E+ + + FY RKL W + + N + K E+ +L V+T+Q A L
Sbjct: 545 -VSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVL 603
Query: 583 MLFNDADRLSFS 594
+N R S
Sbjct: 604 FAWNQRPREKIS 615
Score = 260 (96.6 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 79/314 (25%), Positives = 147/314 (46%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 364 RFLTARDK--AYKAVV-NDATIFKLELPMKQKGVGLKTQPESKCPELLANYCDMLLRKTP 420
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 421 LSKKLTSEDIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 480
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + + N P +++ +L G+W S
Sbjct: 481 REVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS 540
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + + FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 541 EKVF-VSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 599
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L EP K
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVSSPKD 659
Query: 631 ISQSDSFEFNAKFT 644
+ S F N +F+
Sbjct: 660 FTDSTLFFVNQEFS 673
Score = 133 (51.9 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 651 RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEI 710
R+ L R E NE + + R A+++IMK RK + QL +E VE+L + F P+
Sbjct: 691 RLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQK 750
Query: 711 KAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K IK +I+ LI ++I+RD D F Y A
Sbjct: 751 KMIKEQIEWLIEHKYIKRDETDINTFIYMA 780
Score = 40 (19.1 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 316 DQGKALVHQA-EEDV 329
D+G A +HQA +ED+
Sbjct: 55 DKGPAKIHQALKEDI 69
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 472 (171.2 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 106/279 (37%), Positives = 155/279 (55%)
Query: 466 GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLN 525
G FT+K+EGM D+ L+++ + N N +L+V +LT G WP+Y ++
Sbjct: 3 GAAFTSKLEGMFKDMELSKDIMIQFKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH 61
Query: 526 LPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLF 585
LP EMVK E FK FY K RKL W +LG+C + +F+ EL VS +Q L++F
Sbjct: 62 LPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMF 121
Query: 586 NDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTD 645
N+ + S EI + G+L R L SL+C K ++L K P K I D F N F
Sbjct: 122 NEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKH 181
Query: 646 RMRRIRIPL----PPVDDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEM 701
++ RI+I V+++ E V +DR++ IDAA+VRIMK RK L + L+SE
Sbjct: 182 KLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQ 241
Query: 702 LSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
L KP +K RI+ LI+R+++ERD ++P +NY A
Sbjct: 242 LKFPVKPA--DLKKRIESLIDRDYMERDKENPNQYNYIA 278
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 459 (166.6 bits), Expect = 5.3e-43, P = 5.3e-43
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 1 MASKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQD 60
M + ++ FE W+ ++Q EP F E M ++T Y +C+ + P
Sbjct: 1 MVAPTEIKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICAYKNP---- 56
Query: 61 CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL 120
Q+LY KY E+ E + VLPS +K E MLRE K+W ++ R R YL
Sbjct: 57 ----QQLYDKYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYL 112
Query: 121 DRFYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAV 180
D ++ S+ GL SL EV + FRD+VY++++ + ++ALI +EREGE+IDR LV+ +
Sbjct: 113 DDSFL-SKKGLPSLREVGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRNVI 171
Query: 181 DIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDR 240
D+FV G+ + Y +DFE M+ D YY KAS WI +SC +Y +K ++CL++ER+R
Sbjct: 172 DVFVENGMGTLKKYEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERER 231
Query: 241 AVYYFHTRSESKLIEKVQHELLV 263
+Y H +E KL E V++ +++
Sbjct: 232 VTHYLHPTTEPKLFE-VRYGIII 253
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 314 (115.6 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 79/181 (43%), Positives = 109/181 (60%)
Query: 571 ELIVSTYQAACLMLFN---DADRLSFSEILTQLNLNKGDLIRVLHSLSCS-KHKILNKEP 626
EL VSTY LMLFN D + LSF +I + ++ DL R L SLS + K ++L K+P
Sbjct: 652 ELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALASLSINPKARVLLKDP 711
Query: 627 NTKTISQSDSFEFNAKFTDRMRRIRIPL----PPV--DDRREINEDVGKD-RRHNIDAAL 679
TKTI D F FNA F + +I+ P+ V D+ R+ ED + RRH IDAA+
Sbjct: 712 ATKTIRPGDKFSFNAGFVSKAIKIKAPVINSQSKVEGDEERQRTEDKNDETRRHMIDAAI 771
Query: 680 VRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYS 739
VRIMKSRK L + L++E + L F+P++ IK+RI+DLI RE++ER D + + Y
Sbjct: 772 VRIMKSRKELAHNALLAEVIGQLVSRFQPDVAMIKTRIEDLIAREYLER--LDDSGYKYM 829
Query: 740 A 740
A
Sbjct: 830 A 830
Score = 223 (83.6 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 79/297 (26%), Positives = 138/297 (46%)
Query: 247 TRS-ESKLIEKVQHELLVVHRN---QLLENEKSGCRALISQ--EKFDD---------LSR 291
TR+ E++LI ++ L + N Q+L++++ A++ Q + D L+R
Sbjct: 287 TRAVEAELISAHLNDFLALENNGLRQMLDDDRVEDLAILYQLVARVDPSKDLLKKGVLNR 346
Query: 292 IFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANME-QNLVGKILELHD- 349
I L E L + + + QG A + A E +++ + + Q I +HD
Sbjct: 347 ILALGAEIEKNLSTI-----DFSVAQGDAAENPAAEKPKSQALSQQAQQTAAAIKWVHDV 401
Query: 350 -----KFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSDAE 404
KF F + + F F ++ S+E ++ + D K
Sbjct: 402 LDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIHQFG---RSSEFVSLYIDENLKRGIRG 458
Query: 405 KLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQH 464
K SD V +D+ IV++ Y K KDLF +Y+K L RRLL + +++ +K ++ ++
Sbjct: 459 K-SDLEVTAILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQLITMMQLE 517
Query: 465 SGGHFTTKMEGMITDVVLARENQTALDDWFSS----NLNEKPQFDLSVMVLTTGSWP 517
G HFT+K EGM D+ ++ E T + S +++ KP DL++ VLT+ SWP
Sbjct: 518 LGKHFTSKFEGMFKDITISEELSTKYGEHIRSLGDVDVHHKP-IDLAISVLTSNSWP 573
Score = 213 (80.0 bits), Expect = 9.4e-32, Sum P(2) = 9.4e-32
Identities = 70/204 (34%), Positives = 100/204 (49%)
Query: 497 NLNEKPQFDLSVMVLTTGSWPSYKF-----FG---------LNLPSEMVKGVESFKKFYG 542
+++ KP DL++ VLT+ SWP G N P E+ + +SF KFY
Sbjct: 554 DVHHKP-IDLAISVLTSNSWPPDVMGRPAQVGRGDGPPAVDCNYPPEIKRLQDSFFKFYL 612
Query: 543 TKTKARKLTWIYSLGNCHVNGKFE-LKAI----------ELIVSTYQAACLMLFN---DA 588
R LTWI S G+ + F +K + EL VSTY LMLFN D
Sbjct: 613 KDRSGRVLTWIGSAGSADIKCVFPPVKGMSGPLSRERRYELNVSTYGMVVLMLFNSLEDG 672
Query: 589 DRLSFSEILTQLNLNKGDLIRVLHSLSCS-KHKILNKEPNTKTISQSDSFEFNAKFTDRM 647
+ LSF +I + ++ DL R L SLS + K ++L K+P TKTI D F FNA F +
Sbjct: 673 ETLSFEDIQAETSIPPKDLSRALASLSINPKARVLLKDPATKTIRPGDKFSFNAGFVSKA 732
Query: 648 RRIRIPLPPVDDRREINEDVGKDR 671
I+I P ++ + ++ D + R
Sbjct: 733 --IKIKAPVINSQSKVEGDEERQR 754
Score = 177 (67.4 bits), Expect = 4.8e-38, Sum P(2) = 4.8e-38
Identities = 60/254 (23%), Positives = 117/254 (46%)
Query: 92 GEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLK 151
G+ ++ + WEN + + YLD+ +++ G S+ + +FRD +
Sbjct: 110 GDTFMKGLKEAWENHRMSMNMVADILMYLDKGFLKESRG-TSIFVTTIGLFRDHLVNPNT 168
Query: 152 -----R-----DVRDTVIA-LIDEEREGEKIDRALVKKAV----DIFVGIGILDMD-FYR 195
R D+ TVI ID EREG+ I+R+L+ V D++ +D D Y
Sbjct: 169 VVGHDRTFSLFDILSTVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYL 228
Query: 196 QDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIE 255
FE +++ + +Y +A + N ++ + L +E DR T S K+
Sbjct: 229 VRFEPHLLEASRTFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTR 288
Query: 256 KVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFI 315
V+ EL+ H N L E +G R ++ ++ +DL+ +++L ++P + K+ +
Sbjct: 289 AVEAELISAHLNDFLALENNGLRQMLDDDRVEDLAILYQLVAR----VDPSKDLLKKGVL 344
Query: 316 DQGKALVHQAEEDV 329
++ AL + E+++
Sbjct: 345 NRILALGAEIEKNL 358
Score = 37 (18.1 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 QDCSYSQRLYVKYGE 73
+D + S+ L KYGE
Sbjct: 531 KDITISEELSTKYGE 545
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 410 (149.4 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
Identities = 142/545 (26%), Positives = 258/545 (47%)
Query: 133 SLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGI----GI 188
S+ V + + + ++ ++ + + L+ EER+G ID V + FV + G
Sbjct: 118 SIRTVMLEKWNEIIFMNISEQLLVEALRLVKEERDGNIIDAQNVIGIRESFVALNDRAGE 177
Query: 189 LDMDFYRQDFEEQMIDDAGCYYLRKASSWILND-SCPEYMIKAEECLKKERDRAVYYFHT 247
+ YRQ FE Q I+ YY +K +LN+ EYM+ A++ L++E+ RA Y
Sbjct: 178 DPLLVYRQSFERQFIEQTTEYY-KKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEM 236
Query: 248 RSES--KLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEP 305
S + K +EK L+ + +L C LI+ + + L R++RL TR+G++
Sbjct: 237 NSPTSGKHMEKAVIALVESFEDTILAE----CSKLIASKDVERLQRLYRLIRRTRSGIDT 292
Query: 306 VAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLF 365
V + +G ++ + N + + E+ V ++L + DKF + V F D
Sbjct: 293 VLKCIDTHIRTEG---LNDMRNNAENLSTDPER-YVQQLLLMFDKFSSLVREGFCDDARL 348
Query: 366 LMALKEAFEVFCNESI---------------VEISSAEILATFCDNLFKNSD-AEKLSDE 409
L A +AF N+S VE AE+LA +CD L + + ++KL+ E
Sbjct: 349 LTARDKAFRAVVNDSSIFKTEMMNKKGRTLSVESKCAELLANYCDLLLRKTQLSKKLTSE 408
Query: 410 TVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS-GGH 468
++ +++V+++L Y + KD+F F+R L+RRL+ + +++ ++ ++KL++
Sbjct: 409 EIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLRECGMPSD 468
Query: 469 FTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFD-LSVMVLTTGSWP--SYKFFGLN 525
K+ M+ D+ L ++ ++ + N K D +++ VL G+W + +
Sbjct: 469 AVNKLSRMLQDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGSERIRFS 528
Query: 526 LPSEMVKGVESFKKFYGTKTKARKLTWIY--SLGNCHVNGKFELKAIELIVSTYQAACLM 583
LP E+ V + FY + RKL W++ S G V G +L +T+Q A L
Sbjct: 529 LPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTM-VFGTANGGRFDLECTTFQMAVLF 587
Query: 584 LFNDA--DRLSFSEILTQLNLNKGDLIRVLHSLSC---SKHKILNKEPNTKTISQSDSFE 638
FND D++S + L +L R L SL +++IL + + T++ D F
Sbjct: 588 CFNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARD-FT 646
Query: 639 FNAKF 643
+ KF
Sbjct: 647 DSTKF 651
Score = 111 (44.1 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 664 NEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINR 723
+E + R + +V+I+K+RK QL E VE+L F P K IK +ID LI
Sbjct: 689 HESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIEN 748
Query: 724 EFIERDSKDPTMFNY 738
+++ER + D F Y
Sbjct: 749 KYMERRADDINTFVY 763
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 375 (137.1 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 130/530 (24%), Positives = 244/530 (46%)
Query: 146 VYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIG--ILD-MDFYRQDFEEQM 202
++ D+K ++++ + ++ ER G+ D LV + +V + D ++ YR++FE
Sbjct: 225 IFHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSSNAEDKLEIYRENFEMAY 284
Query: 203 IDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELL 262
+ +Y K++ + YM A+ L++E RA Y S S L + + L+
Sbjct: 285 LKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSSFSILTYTLVNVLI 344
Query: 263 VVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETR--TGLEPVAGIFKQYFIDQGKA 320
V H N ++ C ALI + + L+ +FRL D G+EP+ G +++ + G A
Sbjct: 345 VDHLNSIIAE----CPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDLQRHIMSAGLA 400
Query: 321 LVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNES 380
+ A E + T + E+ V ++LEL +KF V F D FL A AF+ N++
Sbjct: 401 DMLSASEVI---TQDSEK-YVERLLELFNKFSDLVRNAFNDDPRFLTARDIAFKTVVNDT 456
Query: 381 IV---EISSA----------------EILATFCDNLFKNSDAEK-LSDETVERTMDKVIV 420
V E+ ++ E+LA +CD L + + K L+ E ++ + V++
Sbjct: 457 SVFKMELPTSIANRGVKYTAPESKCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLL 516
Query: 421 LLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS-GGHFTTKMEGMITD 479
+L Y KD+F +++ L RRL+ + + ++ + L++ + ++ M D
Sbjct: 517 VLKYVNNKDVFMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVNRLARMFQD 576
Query: 480 VVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSY-KFFGLNLPSEMVKGVESFK 538
+ ++ + L+ F ++++ +++ +L G+W + ++LP E+ + +
Sbjct: 577 IKVSED----LNTQFRTSISRHDA--INIKILNAGAWARCSERVSVSLPIELEDYIPDVE 630
Query: 539 KFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDA--DRLSFSEI 596
+FY K RKL W + + N + +L V+T+Q A L +N D++S+ +
Sbjct: 631 EFYKKKHSGRKLQWYHHMSNGTITFVNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENL 690
Query: 597 LTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNTKTISQSDSFEFNAKF 643
L +L R L SL K +IL EP IS F N F
Sbjct: 691 RLATELPDPELRRTLWSLVAFPKIKKQILLMEP--AAISSPKDFAENTMF 738
Score = 118 (46.6 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 651 RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEI 710
R+ L ++E N+ + + R A+++IMK RK + L E +++L + F P
Sbjct: 763 RLQLSTERSQQEDNQSIVQLRILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSK 822
Query: 711 KAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K IK +++ LI +++ RD D MF Y A
Sbjct: 823 KMIKEQLEWLIENKYMRRDDDDINMFIYVA 852
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 352 (129.0 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 109/472 (23%), Positives = 217/472 (45%)
Query: 75 FEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQ-AGLAS 133
F + Q+ VL S +D +L+ ++ +W L + F L+ + Q + S
Sbjct: 51 FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGSNKKS 107
Query: 134 LIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIG 187
+E +V + + ++ ++K ++D+ + L+ ER GE D LV + +V +
Sbjct: 108 TVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLC 167
Query: 188 ILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
D YR +FE+ +D +Y +A S++ + YM A+ LK+E RA+ Y
Sbjct: 168 SNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRY 227
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
TR E +E + + E + C+ +I + + + L +F L D+ G+E
Sbjct: 228 LETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIE 287
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
P+ +++ I G A + A E + T + E+ V ++L L ++F V F D
Sbjct: 288 PMLKDLEEHIISAGLADMVAAAETI---TTDSEK-YVEQLLTLFNRFSKLVKEAFQDDPR 343
Query: 365 FLMALKEAFEVFCNESIV------------------EISSAEILATFCDNLFKNSD-AEK 405
FL A +A++ N++ + E E+LA +CD L + + ++K
Sbjct: 344 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 403
Query: 406 LSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS 465
L+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L++
Sbjct: 404 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 463
Query: 466 -GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSW 516
+ K+ M D+ ++ + A + +N P +++ +L G+W
Sbjct: 464 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAW 515
Score = 269 (99.8 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 79/314 (25%), Positives = 150/314 (47%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 343 RFLTARDK--AYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP 399
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 400 LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 459
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + A + +N P +++ +L G+W S
Sbjct: 460 REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS 519
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 520 EKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 578
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L EP K
Sbjct: 579 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKD 638
Query: 631 ISQSDSFEFNAKFT 644
++ F N +F+
Sbjct: 639 FTEGTLFSVNQEFS 652
Score = 140 (54.3 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 41/114 (35%), Positives = 60/114 (52%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+++Q S NAK R + I R+ L R E NE + + R A+++IMK R
Sbjct: 646 SVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 705
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +I+ LI ++I RD D F Y A
Sbjct: 706 KKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 759
Score = 40 (19.1 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 316 DQGKALVHQA-EEDV 329
D+G A +HQA +ED+
Sbjct: 34 DKGPAKIHQALKEDI 48
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 352 (129.0 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 121/546 (22%), Positives = 240/546 (43%)
Query: 1 MASKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQD 60
+ +K L FE+ W M + ++ L++ V+ +C +
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWD--DKGP 58
Query: 61 CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL 120
Q L E F + Q+ VL S +D +L+ ++ +W L + F L
Sbjct: 59 AKIHQALKEDILE-FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQL 114
Query: 121 DRFYVRSQ-AGLASLIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDR 173
+ + Q + S +E +V + + ++ ++K ++D+ + L+ ER GE D
Sbjct: 115 EITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS 174
Query: 174 ALVKKAVDIFVGIGILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKA 230
LV + +V + D YR +FE+ +D +Y +A S++ + YM A
Sbjct: 175 QLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYA 234
Query: 231 EECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLS 290
+ LK+E RA+ Y TR E +E + + E + C+ +I + + + L
Sbjct: 235 DAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLH 294
Query: 291 RIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDK 350
+F L D+ G+EP+ +++ I G A + A E + T + E+ V ++L L ++
Sbjct: 295 LMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETI---TTDSEK-YVEQLLTLFNR 350
Query: 351 FMAYVSICFGDHKLFLMALKEAFEVFCNESIV------------------EISSAEILAT 392
F V F D FL A +A++ N++ + E E+LA
Sbjct: 351 FSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLAN 410
Query: 393 FCDNLFKNSD-AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNK 451
+CD L + + ++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D +
Sbjct: 411 YCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADS 470
Query: 452 DYDKTFLSKLKQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMV 510
+ ++ + L++ + K+ M D+ ++ + A + +N P +++ +
Sbjct: 471 EIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKI 530
Query: 511 LTTGSW 516
L G+W
Sbjct: 531 LNAGAW 536
Score = 269 (99.8 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 79/314 (25%), Positives = 150/314 (47%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 364 RFLTARDK--AYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP 420
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 421 LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 480
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + A + +N P +++ +L G+W S
Sbjct: 481 REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS 540
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 541 EKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 599
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L EP K
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKD 659
Query: 631 ISQSDSFEFNAKFT 644
++ F N +F+
Sbjct: 660 FTEGTLFSVNQEFS 673
Score = 140 (54.3 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 41/114 (35%), Positives = 60/114 (52%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+++Q S NAK R + I R+ L R E NE + + R A+++IMK R
Sbjct: 667 SVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 726
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +I+ LI ++I RD D F Y A
Sbjct: 727 KKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 352 (129.0 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 121/546 (22%), Positives = 240/546 (43%)
Query: 1 MASKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQD 60
+ +K L FE+ W M + ++ L++ V+ +C +
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWD--DKGP 58
Query: 61 CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL 120
Q L E F + Q+ VL S +D +L+ ++ +W L + F L
Sbjct: 59 AKIHQALKEDILE-FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQL 114
Query: 121 DRFYVRSQ-AGLASLIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDR 173
+ + Q + S +E +V + + ++ ++K ++D+ + L+ ER GE D
Sbjct: 115 EITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS 174
Query: 174 ALVKKAVDIFVGIGILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKA 230
LV + +V + D YR +FE+ +D +Y +A S++ + YM A
Sbjct: 175 QLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYA 234
Query: 231 EECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLS 290
+ LK+E RA+ Y TR E +E + + E + C+ +I + + + L
Sbjct: 235 DAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLH 294
Query: 291 RIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDK 350
+F L D+ G+EP+ +++ I G A + A E + T + E+ V ++L L ++
Sbjct: 295 LMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETI---TTDSEK-YVEQLLTLFNR 350
Query: 351 FMAYVSICFGDHKLFLMALKEAFEVFCNESIV------------------EISSAEILAT 392
F V F D FL A +A++ N++ + E E+LA
Sbjct: 351 FSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLAN 410
Query: 393 FCDNLFKNSD-AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNK 451
+CD L + + ++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D +
Sbjct: 411 YCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADS 470
Query: 452 DYDKTFLSKLKQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMV 510
+ ++ + L++ + K+ M D+ ++ + A + +N P +++ +
Sbjct: 471 EIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKI 530
Query: 511 LTTGSW 516
L G+W
Sbjct: 531 LNAGAW 536
Score = 269 (99.8 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 79/314 (25%), Positives = 150/314 (47%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 364 RFLTARDK--AYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP 420
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 421 LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 480
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + A + +N P +++ +L G+W S
Sbjct: 481 REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS 540
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 541 EKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 599
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L EP K
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKD 659
Query: 631 ISQSDSFEFNAKFT 644
++ F N +F+
Sbjct: 660 FTEGTLFSVNQEFS 673
Score = 140 (54.3 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 41/114 (35%), Positives = 60/114 (52%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+++Q S NAK R + I R+ L R E NE + + R A+++IMK R
Sbjct: 667 SVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 726
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +I+ LI ++I RD D F Y A
Sbjct: 727 KKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 350 (128.3 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 109/472 (23%), Positives = 217/472 (45%)
Query: 75 FEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQ-AGLAS 133
F + Q+ VL S +D +L+ ++ +W L + F L+ + Q + S
Sbjct: 51 FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGSNKKS 107
Query: 134 LIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIG 187
+E +V + + ++ ++K ++D+ + L+ ER GE D LV + +V +
Sbjct: 108 NVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLC 167
Query: 188 ILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYY 244
D YR +FE+ +D +Y +A S++ + YM A+ LK+E RA+ Y
Sbjct: 168 SNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRY 227
Query: 245 FHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLE 304
TR E +E + + E + C+ +I + + + L +F L D+ G+E
Sbjct: 228 LETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIE 287
Query: 305 PVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKL 364
P+ +++ I G A + A E + T + E+ V ++L L ++F V F D
Sbjct: 288 PMLKDLEEHIISAGLADMVAAAETI---TTDSEK-YVEQLLTLFNRFSKLVKEAFQDDPR 343
Query: 365 FLMALKEAFEVFCNESIV------------------EISSAEILATFCDNLFKNSD-AEK 405
FL A +A++ N++ + E E+LA +CD L + + ++K
Sbjct: 344 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 403
Query: 406 LSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS 465
L+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L++
Sbjct: 404 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 463
Query: 466 -GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSW 516
+ K+ M D+ ++ + A + +N P +++ +L G+W
Sbjct: 464 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAW 515
Score = 269 (99.8 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 79/314 (25%), Positives = 150/314 (47%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 343 RFLTARDK--AYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP 399
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 400 LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 459
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + A + +N P +++ +L G+W S
Sbjct: 460 REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS 519
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 520 EKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 578
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L EP K
Sbjct: 579 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKD 638
Query: 631 ISQSDSFEFNAKFT 644
++ F N +F+
Sbjct: 639 FTEGTLFSVNQEFS 652
Score = 140 (54.3 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 41/114 (35%), Positives = 60/114 (52%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+++Q S NAK R + I R+ L R E NE + + R A+++IMK R
Sbjct: 646 SVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 705
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +I+ LI ++I RD D F Y A
Sbjct: 706 KKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 759
Score = 40 (19.1 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 316 DQGKALVHQA-EEDV 329
D+G A +HQA +ED+
Sbjct: 34 DKGPAKIHQALKEDI 48
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 348 (127.6 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 121/546 (22%), Positives = 241/546 (44%)
Query: 1 MASKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQD 60
+ +K L FE+ W M + ++ L++ V+ +C + +
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWDDKGSS- 59
Query: 61 CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL 120
Q L E F + Q+ VL S +D +L+ ++ +W L + F L
Sbjct: 60 -KIHQALKEDILE-FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQL 114
Query: 121 DRFYVRSQAG-LASLIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDR 173
+ + Q+ S +E +V + + ++ ++K ++D+ + L+ ER GE D
Sbjct: 115 EVTLLGKQSSNKKSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS 174
Query: 174 ALVKKAVDIFVGIGILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKA 230
LV + +V + D YR +FE+ +D +Y +A S++ + YM A
Sbjct: 175 QLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYA 234
Query: 231 EECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLS 290
+ LK+E RA+ Y TR E +E + + E + C+ +I + + + L
Sbjct: 235 DAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLH 294
Query: 291 RIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDK 350
+F L D+ G+EP+ +++ I G A + A E + T + E+ V ++L L ++
Sbjct: 295 LMFSLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETI---TTDSEK-YVEQLLTLFNR 350
Query: 351 FMAYVSICFGDHKLFLMALKEAFEVFCNESIV------------------EISSAEILAT 392
F V F D FL A +A++ N++ + E E+LA
Sbjct: 351 FSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLAN 410
Query: 393 FCDNLFKNSD-AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNK 451
+CD L + + ++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D +
Sbjct: 411 YCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADS 470
Query: 452 DYDKTFLSKLKQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMV 510
+ ++ + L++ + K+ M D+ ++ + A + +N P +++ +
Sbjct: 471 EIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKI 530
Query: 511 LTTGSW 516
L G+W
Sbjct: 531 LNAGAW 536
Score = 264 (98.0 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 78/314 (24%), Positives = 149/314 (47%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 364 RFLTARDK--AYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP 420
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 421 LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 480
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + A + +N P +++ +L G+W S
Sbjct: 481 REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS 540
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 541 EKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 599
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L +P K
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKD 659
Query: 631 ISQSDSFEFNAKFT 644
++ F N F+
Sbjct: 660 FTEGTLFSVNQDFS 673
Score = 139 (54.0 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 41/114 (35%), Positives = 60/114 (52%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+++Q S NAK R + I R+ L R E NE + + R A+++IMK R
Sbjct: 667 SVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 726
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +I+ LI ++I RD D F Y A
Sbjct: 727 KKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 348 (127.6 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 121/546 (22%), Positives = 241/546 (44%)
Query: 1 MASKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQD 60
+ +K L FE+ W M + ++ L++ V+ +C + +
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWDDKGSS- 59
Query: 61 CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL 120
Q L E F + Q+ VL S +D +L+ ++ +W L + F L
Sbjct: 60 -KIHQALKEDILE-FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQL 114
Query: 121 DRFYVRSQAG-LASLIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDR 173
+ + Q+ S +E +V + + ++ ++K ++D+ + L+ ER GE D
Sbjct: 115 EVTLLGKQSSNKKSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS 174
Query: 174 ALVKKAVDIFVGIGILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKA 230
LV + +V + D YR +FE+ +D +Y +A S++ + YM A
Sbjct: 175 QLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYA 234
Query: 231 EECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLS 290
+ LK+E RA+ Y TR E +E + + E + C+ +I + + + L
Sbjct: 235 DAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLH 294
Query: 291 RIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDK 350
+F L D+ G+EP+ +++ I G A + A E + T + E+ V ++L L ++
Sbjct: 295 LMFSLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETI---TTDSEK-YVEQLLTLFNR 350
Query: 351 FMAYVSICFGDHKLFLMALKEAFEVFCNESIV------------------EISSAEILAT 392
F V F D FL A +A++ N++ + E E+LA
Sbjct: 351 FSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLAN 410
Query: 393 FCDNLFKNSD-AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNK 451
+CD L + + ++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D +
Sbjct: 411 YCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADS 470
Query: 452 DYDKTFLSKLKQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMV 510
+ ++ + L++ + K+ M D+ ++ + A + +N P +++ +
Sbjct: 471 EIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKI 530
Query: 511 LTTGSW 516
L G+W
Sbjct: 531 LNAGAW 536
Score = 264 (98.0 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 78/314 (24%), Positives = 149/314 (47%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 364 RFLTARDK--AYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP 420
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 421 LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 480
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + A + +N P +++ +L G+W S
Sbjct: 481 REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS 540
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 541 EKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 599
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L +P K
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKD 659
Query: 631 ISQSDSFEFNAKFT 644
++ F N F+
Sbjct: 660 FTEGTLFSVNQDFS 673
Score = 139 (54.0 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 41/114 (35%), Positives = 60/114 (52%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+++Q S NAK R + I R+ L R E NE + + R A+++IMK R
Sbjct: 667 SVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 726
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +I+ LI ++I RD D F Y A
Sbjct: 727 KKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 350 (128.3 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 121/546 (22%), Positives = 241/546 (44%)
Query: 1 MASKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQD 60
+ +K L FE+ W M + ++ L++ V+ +C + +
Sbjct: 7 LKNKGSLQFEDKWDFMHPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWDDKGSS- 59
Query: 61 CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL 120
Q L E F + Q+ VL S +D +L+ ++ +W L + F L
Sbjct: 60 -KIHQALKEDILE-FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQL 114
Query: 121 DRFYVRSQAG-LASLIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDR 173
+ + Q+ S +E +V + + ++ ++K ++D+ + L+ ER GE D
Sbjct: 115 EVTLLGKQSSNKKSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS 174
Query: 174 ALVKKAVDIFVGIGILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKA 230
LV + +V + D YR +FE+ +D +Y +A S++ + YM A
Sbjct: 175 QLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYA 234
Query: 231 EECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLS 290
+ LK+E RA+ Y TR E +E + + E + C+ +I + + + L
Sbjct: 235 DAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLH 294
Query: 291 RIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDK 350
+F L D+ G+EP+ +++ I G A + A E + T + E+ V ++L L ++
Sbjct: 295 LMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETI---TTDSEK-YVEQLLTLFNR 350
Query: 351 FMAYVSICFGDHKLFLMALKEAFEVFCNESIV------------------EISSAEILAT 392
F V F D FL A +A++ N++ + E E+LA
Sbjct: 351 FSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLAN 410
Query: 393 FCDNLFKNSD-AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNK 451
+CD L + + ++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D +
Sbjct: 411 YCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADS 470
Query: 452 DYDKTFLSKLKQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMV 510
+ ++ + L++ + K+ M D+ ++ + A + +N P +++ +
Sbjct: 471 EIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKI 530
Query: 511 LTTGSW 516
L G+W
Sbjct: 531 LNAGAW 536
Score = 264 (98.0 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 78/314 (24%), Positives = 149/314 (47%)
Query: 343 KILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD 402
+ L DK AY ++ D +F + L + ++ E E+LA +CD L + +
Sbjct: 364 RFLTARDK--AYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP 420
Query: 403 -AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D + + ++ + L
Sbjct: 421 LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL 480
Query: 462 KQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--S 518
++ + K+ M D+ ++ + A + +N P +++ +L G+W S
Sbjct: 481 REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS 540
Query: 519 YKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQ 578
K F ++LP+E+ + ++FY RKL W + + N + K E+ +L V+T+Q
Sbjct: 541 EKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQ 599
Query: 579 AACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNT---KT 630
A L +N R +SF + L +L R L SL K ++L +P K
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKD 659
Query: 631 ISQSDSFEFNAKFT 644
++ F N F+
Sbjct: 660 FTEGTLFSVNQDFS 673
Score = 135 (52.6 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 40/114 (35%), Positives = 59/114 (51%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+++Q S NAK R + I R+ L R E NE + + R A+++IMK R
Sbjct: 667 SVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 726
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +++ LI +I RD D F Y A
Sbjct: 727 KKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFIYMA 780
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 316 (116.3 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLS 615
+G V G K I L VST+Q LMLFN+ ++ +F EI + ++ + +L+R L SL+
Sbjct: 117 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 175
Query: 616 CSK--HKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVD------DRREINEDV 667
C K ++L KEP +K I F N +FT ++ R++I +R+E + V
Sbjct: 176 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 235
Query: 668 GKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIE 727
DR+H I+AA+VRIMKSRK + + L++E + L F P IK RI+ LI RE++
Sbjct: 236 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 295
Query: 728 RDSKDPTMFNYSA 740
R +D ++ Y A
Sbjct: 296 RTPEDRKVYTYVA 308
Score = 100 (40.3 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 505 DLSVMVLTTGSWPSYKFFG-LNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNG 563
DL+V VLTTG WP+ N+P E F++FY K R+LT + +G+ +N
Sbjct: 42 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNA 101
Query: 564 KF 565
F
Sbjct: 102 TF 103
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 295 (108.9 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 101/412 (24%), Positives = 194/412 (47%)
Query: 263 VVHRNQLLENE---KSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGK 319
++ RN+ E+E SG + S E L +F L D+ +G+EP+ + + + G
Sbjct: 284 MIKRNET-ESEYGRSSGTKGSASSE----LHLMFSLMDKVPSGIEPMLKDLEDHIMSAGL 338
Query: 320 A-LVHQAEEDVRNKTANMEQ-----NLVGKILE--LHD--KFM-----AYVSICFGDHKL 364
A +V AE + +EQ N K+++ D +F+ AY ++ D +
Sbjct: 339 ADMVASAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTSRDKAYKAVV-NDATI 397
Query: 365 FLMALKEAFEVFCNESIVEISSAEILATFCDNLFKNSD-AEKLSDETVERTMDKVIVLLG 423
F + L + ++ E E+LA +CD L + + ++KL+ E +E + +V+++L
Sbjct: 398 FKLELPLKQKGVSLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLK 457
Query: 424 YFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHS-GGHFTTKMEGMITDVVL 482
Y + KD+F +++ L RRL+ D + + ++ + L++ + K+ M D+ +
Sbjct: 458 YVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKV 517
Query: 483 ARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP--SYKFFGLNLPSEMVKGVESFKKF 540
+ + + + N P +++ +L G+W S K F ++LP+E+ + + F
Sbjct: 518 SEDLNQSFKEMHKHNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEDF 576
Query: 541 YGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDA--DRLSFSEILT 598
Y RKL W + + N + K E+ +L V+T+Q A L +N +R+SF +
Sbjct: 577 YKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKL 636
Query: 599 QLNLNKGDLIRVLHSLSCS---KHKILNKEP---NTKTISQSDSFEFNAKFT 644
L +L R L SL K ++L+ EP + K ++ F N +F+
Sbjct: 637 ATELPDAELRRTLWSLVAFPKLKRQVLSYEPVVGSPKDFAEGTVFSINQEFS 688
Score = 187 (70.9 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 89/407 (21%), Positives = 174/407 (42%)
Query: 1 MASKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQD 60
+ +K L FE+ W LM + ++ L++ V+ +C +
Sbjct: 7 LKNKGSLQFEDKWDLMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWD--DKGP 58
Query: 61 CSYSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYL 120
Q L + F + Q+ VL S +D +L+ ++ +W L + F L
Sbjct: 59 AKIHQALKEDILD-FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFSKL 114
Query: 121 DRFYVRSQ-AGLASLIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDR 173
+ + +Q + S +E +V + + ++ ++K ++D+ + L+ ER GE D
Sbjct: 115 EITLLGNQGSNKKSNVEDSIVRKLMLDTWNESIFCNIKSRLQDSAMKLVHAERLGEAFDS 174
Query: 174 ALVKKAVDIFVGI-GILD--MDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKA 230
LV + +V + D + YR++FE+ +D +Y +A S++ + YM A
Sbjct: 175 QLVIGVRESYVNLCSNTDDKLQIYRENFEKSYLDSTERFYKTQAPSYLQQNGVQNYMKYA 234
Query: 231 EECLKKERDRAVYYFHTRSESK----LIEKVQHELLVVHRNQLL--------ENEKSGCR 278
+ L++E RA+ Y TR E L+E + L+ + +L NE
Sbjct: 235 DGKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILTECPGMIKRNETESEY 294
Query: 279 ALISQEK---FDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTAN 335
S K +L +F L D+ +G+EP+ + + + G A + + E + T +
Sbjct: 295 GRSSGTKGSASSELHLMFSLMDKVPSGIEPMLKDLEDHIMSAGLADMVASAETI---TTD 351
Query: 336 MEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIV 382
E+ V ++L L ++F V F D FL + +A++ N++ +
Sbjct: 352 SEK-YVEQLLTLFNRFSKLVKEAFQDDPRFLTSRDKAYKAVVNDATI 397
Score = 137 (53.3 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 41/114 (35%), Positives = 61/114 (53%)
Query: 630 TISQSDSFEFNAKFTDR--MRRI-RIPLPPVDDRREINEDVGKDRRHNIDAALVRIMKSR 686
+I+Q S N+K R + I R+ L R E NE + + R A+++IMK R
Sbjct: 682 SINQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMR 741
Query: 687 KVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
K + QL +E VE+L + F P+ K IK +I+ LI ++I+RD D F Y A
Sbjct: 742 KRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA 795
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 347 (127.2 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 158/653 (24%), Positives = 290/653 (44%)
Query: 119 YLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIALIDEEREGEKIDR---AL 175
Y+D+ Y + + + ++ + +FR + + + +I+ I+ R +D +L
Sbjct: 118 YMDKVYCKPNRCM-EVYDMCLDLFRIEILQKCSSSLISALISDIERIRNLGSVDSEHTSL 176
Query: 176 VKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLK 235
K + + + F+ DFE +I YY + +L E + K + +
Sbjct: 177 WKVLIGMMETLHDNRDSFFLTDFEPVLISATEEYYNKAIDIELLTPI--ESLEKIRKLRQ 234
Query: 236 KERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRL 295
E + + S +KL +++ L+ + ++E+ +IS K L I+ L
Sbjct: 235 FESMLDSSFLNVDSHNKLKTVLENVLIWGKLSDIIEDLTHEAM-VISNGKL--LQEIYDL 291
Query: 296 YDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYV 355
E + + + I K Y I++ A+ E R K N +I+EL+ +++
Sbjct: 292 SSEEKYRVTVIESI-KSY-INKN-AINIPFNEGNRKKGQNAI-TWSSEIVELYRSQHSFL 347
Query: 356 -SICFGDHKLFLMA-------LKEAFEV-FCNESIVEISSAEILATFCDNLFKNS---DA 403
SI FG +L + L + F + F E + +E L+T+ D+ K + DA
Sbjct: 348 ESIDFGSVRLNNLTGDVSNAILGDVFSMYFSKEGALP---SEYLSTYVDHCMKRTKEKDA 404
Query: 404 E--KLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
E K+ + ++ T L+G KD+F + Y+K+L+RRLL + + +K + +
Sbjct: 405 EIVKIKQDLLDSTK-----LIGLLTEKDIFEKIYKKQLSRRLLQQRS-LVEIEKWMVQMI 458
Query: 462 KQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKF 521
K+ G FT+K+E M+ D+ L+ E A S +N + VLT SWP
Sbjct: 459 KKVLGTFFTSKLEIMLRDISLSSEMYQAFQH---STINSIEYLSFAPQVLTRTSWPFQST 515
Query: 522 F----GLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTY 577
G++LP M + + F+ +Y K K R L W + L + +F E+ S Y
Sbjct: 516 NPIDEGISLPPRMSQILAGFEGYYSLKYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVY 575
Query: 578 QAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSC-SKHKILNKEPNTKTISQSDS 636
+LF D + L+ EI ++ D+ ++ S+S + KIL K ++ +
Sbjct: 576 AGVIFLLFEDYEELTLGEIYELTHIPIDDVKSLVMSMSTIPRCKILKKSSSSGNMK---- 631
Query: 637 FEFNAKFTDRMRRIRIPLP--PVDDRREINEDVGK--DRRHN-----IDAALVRIMKSRK 687
F N F+ R++++P+ P+ ++ N D N + A +VRIMK+
Sbjct: 632 FSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEG 691
Query: 688 VLGYQQLISECVEMLSH--SFKPEIKAIKSRIDDLINREFIERDSKDPTMFNY 738
L +QQL+ + S P I +K I LI +E+I+R++ DP+ ++Y
Sbjct: 692 KLSHQQLLERTTKRTQSRLSLTPSI--LKRSIQLLIEKEYIQRNADDPSYYHY 742
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 344 (126.2 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 80/273 (29%), Positives = 145/273 (53%)
Query: 190 DMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRS 249
D+ Y+ FE++ +++ Y + + PEY+ + L++E DR + Y +
Sbjct: 430 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 489
Query: 250 ESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGI 309
+ LI V+ +LL H +L+ G L+ + + DLS +++L+ R G++ +
Sbjct: 490 QKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 546
Query: 310 FKQYFIDQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ +Y G +V E+D KT +V ++L+ DK + ICF ++ F+ A+
Sbjct: 547 WIEYIKAFGSTIVINPEKD---KT------MVQELLDFKDKVDHIIDICFLKNEKFINAM 597
Query: 370 KEAFEVFCNESIVEISSAEILATFCDNLFKNSDAEKLSDETVERTMDKVIVLLGYFKYKD 429
KEAFE F N+ AE++A + D+ + + E +DE +E+ +DK++++ + KD
Sbjct: 598 KEAFETFINKR--PNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKD 654
Query: 430 LFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLK 462
+F FY+K LA+RLL K + D +K+ LSKLK
Sbjct: 655 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 687
Score = 269 (99.8 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 74/299 (24%), Positives = 145/299 (48%)
Query: 36 ASEECMTLYTIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFEDKRGE 93
A E +I Y+L + CSY S LY + ++ E+H+++ + E
Sbjct: 276 AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREYSLDS 335
Query: 94 FM-LREFVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLK 151
+ L++ + W+N + ++R F +LDR YV + L S+ ++ + +FR + D K
Sbjct: 336 VLFLKKIDRCWQN-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQK 394
Query: 152 RDVR--DTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCY 209
+ D ++ LI+ ER GE IDR+L++ + + + D+ Y+ FE++ +++
Sbjct: 395 VQNKTIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRL 449
Query: 210 YLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQL 269
Y + + PEY+ + L++E DR + Y ++ LI V+ +LL H +
Sbjct: 450 YAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAI 509
Query: 270 LENEKSGCRALISQEKFDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEED 328
L+ G L+ + + DLS +++L+ R G++ + + +Y G +V E+D
Sbjct: 510 LQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKD 565
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 245 (91.3 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 99/401 (24%), Positives = 181/401 (45%)
Query: 254 IEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDE--TRTGLEPVAGIFK 311
IEK+++E +V+ + +E S ALI ++ F + R+ +++ +TG ++ +
Sbjct: 292 IEKLENEFVVLLDARDIEKITS-LYALIRRD-FTLIPRMASVFENYVKKTGENEISSLLA 349
Query: 312 QYFIDQGKALVHQAEEDVRNKTANM--EQNLVGKILELHDKFMAYVSICFGDHKLFLMAL 369
+ + K + + + TA+ ++ + K+LE+HD F + F D AL
Sbjct: 350 MHKHNIMKN-ENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKIFNESFPDDIPLAKAL 408
Query: 370 KEAFEVFCN--ESIVEISS--------AEILATFCDNLFKNSDAEKLSDETVERTMDKVI 419
A F N E + S +E+LA + D L K + +++ + + + +I
Sbjct: 409 DNACGAFININEFALPAGSPKSATSKTSEMLAKYSDILLKKATKPEVASDMSD---EDII 465
Query: 420 VLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITD 479
+ Y KD F YR+ A+RL+ + + ++ + +L+ + +T K+ M D
Sbjct: 466 TIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRLQAANSMEYTGKITKMFQD 525
Query: 480 VVLARENQTALDDWFSSNLNEKPQF------DLSVMVLTTGSWP-SYKFFGLNLPSEMVK 532
+ L++ L+D F+ L +P + DL VL WP SY+ LP E+V
Sbjct: 526 IRLSK----ILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMWPFSYQEVEFKLPKELVP 581
Query: 533 GVESFKKFYGTKTKARKLTWIYSL--GNCHVN-GKFELKAIELIVSTYQAACLMLFNDAD 589
E K+ Y K R L W++ L G + GK V+ +Q A L+L+NDAD
Sbjct: 582 SHEKLKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTLFQMAILLLYNDAD 641
Query: 590 RLSFSEILTQLNLNKGDLIRVLHSLSCS----KHKILNKEP 626
+LT N+ +G + + H + K K++ + P
Sbjct: 642 ------VLTLENIQEGTSLTIQHIAAAMVPFIKFKLIQQVP 676
Score = 207 (77.9 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 75/337 (22%), Positives = 158/337 (46%)
Query: 73 EVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQA--G 130
E + ++++ +L +F+ E L+ +VK+W+ + +L F+Y++R++V+ + G
Sbjct: 88 EKLKNYLKNYIL-NFKQSNSETFLQFYVKRWKRFTIGAIFLNHAFDYMNRYWVQKERSDG 146
Query: 131 LASLIEVPVVVFRDRVYKDLKRDV-RDTVI-ALIDEE---REGEKIDRALVKKAVDIFVG 185
+ +V + +K++ D +D +I L+D+ REG+ I R+ + A+ V
Sbjct: 147 KRHIFDVNTLCLM--TWKEVMFDPSKDVLINELLDQVTLGREGQIIQRSNISTAIKSLVA 204
Query: 186 IGI-------LDMDFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKER 238
+GI L+++ Y Q FE+ + YY + + ++ S EY+ +A E +K+E
Sbjct: 205 LGIDPQDLKKLNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREE 264
Query: 239 DRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKFDDLSRIFRLYDE 298
Y+ ++ K + +++L+ + LENE L+ + ++ ++ L
Sbjct: 265 KAMTIYWDDHTK-KPLSMALNKVLITDHIEKLENEFV---VLLDARDIEKITSLYALIRR 320
Query: 299 TRTGLEPVAGIFKQYFIDQGK----ALVHQAEEDV-RNKTANMEQ------------NLV 341
T + +A +F+ Y G+ +L+ + ++ +N+ AN ++ + +
Sbjct: 321 DFTLIPRMASVFENYVKKTGENEISSLLAMHKHNIMKNENANPKKLALMTAHSLSPKDYI 380
Query: 342 GKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCN 378
K+LE+HD F + F D AL A F N
Sbjct: 381 KKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFIN 417
Score = 116 (45.9 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 24/83 (28%), Positives = 48/83 (57%)
Query: 658 DDRREINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRI 717
+D R I +++ +R+ ++A +VRIMK+++ L + L++EC+ F ++ +K I
Sbjct: 735 EDER-IEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAI 793
Query: 718 DDLINREFIERDSKDPTMFNYSA 740
D LI + +++R D + Y A
Sbjct: 794 DSLIQKGYLQRGD-DGESYAYLA 815
Score = 43 (20.2 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 609 RVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDD 659
R++H S S ++E + + ++S E+ K T + IR+ DD
Sbjct: 488 RLIHGTSTSAE---DEENIIQRLQAANSMEYTGKITKMFQDIRLSKILEDD 535
Score = 37 (18.1 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 593 FSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFE 638
+ + T +N G +L SLS H + K +++ + E
Sbjct: 695 YKALKTNINFASGVKNDILQSLSGGGHDNHGNKLGNKRLTEDERIE 740
>FB|FBgn0036332 [details] [associations]
symbol:CG11261 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00884 EMBL:AE014296 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HSSP:Q9JLV5 EMBL:AY069566 RefSeq:NP_648620.1 UniGene:Dm.950
SMR:Q9VU33 EnsemblMetazoa:FBtr0075899 GeneID:39474
KEGG:dme:Dmel_CG11261 UCSC:CG11261-RA FlyBase:FBgn0036332
InParanoid:Q9VU33 OMA:IVRIMER OrthoDB:EOG4DZ09D GenomeRNAi:39474
NextBio:813830 Uniprot:Q9VU33
Length = 670
Score = 299 (110.3 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 112/402 (27%), Positives = 182/402 (45%)
Query: 349 DKFMAYVSICFGDHKLFLM---ALKEAFEVFCNESIVE----ISSAEILATFCDNLF-KN 400
D A++ +C G + L L E + C E I I +L T+ + L K
Sbjct: 283 DYIQAFLGLCRGPLQRALRDHTKLAEVVDAVCKEEINRKGQIIDPTRLLVTYANELMTKR 342
Query: 401 SDAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSK 460
++E+ + ++R + K + L +YK F + Y K L R + + + + S
Sbjct: 343 QESEEAIIDELKRIV-KCVEFLSD-EYK--FIDMYLKALRIRQINETSTSDGVESIMYSL 398
Query: 461 LKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYK 520
L + T + + DV R + D +S K FD S++
Sbjct: 399 LNKKMANFVTRCIYVQLRDVDKLRTLKKEFQDHLNSK-GIKLGFDFRPKCFKNDG--SFE 455
Query: 521 FFGLNLPSEMVKGVESFKKFY-GTKTKARKLTWI---YSLGN--CHVNGKFELKAIELIV 574
F L LP E+ + + F+ FY K +++ + + S G CH+N + L V
Sbjct: 456 NFNLTLPDELQQAWKEFRIFYEARKLQSKAIIQLNNELSSGEITCHLNQSVYI----LEV 511
Query: 575 STYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQS 634
ST Q A LMLFN +R + E++T L + L L + + +NK
Sbjct: 512 STLQMAVLMLFNRHERFTEQELVTALGVELETLQEALKQIKFLVYIEVNKV--------- 562
Query: 635 DSFEFNAKFTDRMRRI--RIPLP----PVDDRREINEDVGKDRRHNIDAALVRIMKSRKV 688
+ E N FT+R RR+ PLP ++++ EI + +D++ +DAA+VRIMK +K
Sbjct: 563 NYIEINMDFTNRKRRLFCNEPLPRKMRKIEEKSEIELKIRRDKQ--VDAAIVRIMKGQKQ 620
Query: 689 LGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFIERDS 730
L Y +LIS E L KP++ IK R+D L+ RE++ERD+
Sbjct: 621 LEYSELISLVYEELKDRVKPQVSFIKKRLDYLVEREYLERDN 662
Score = 44 (20.5 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 13/73 (17%), Positives = 35/73 (47%)
Query: 35 FASEECMTLYTIVYDLCSIELPSAQDCSYSQR-LYVKYGEVFEEHMQSD--VLPS-FEDK 90
F ++ M LY ++Y C+ E + R LY+ + + +++ V+ + +D
Sbjct: 35 FDGQKLMHLYHLIYKQCAAERNWNNPAQKNGRSLYIVLSDCLMKRLKNIAWVMENQLDDN 94
Query: 91 RGEFMLREFVKQW 103
+ ++ ++++ W
Sbjct: 95 KPIRLIAKYLEHW 107
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 297 (109.6 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 96/386 (24%), Positives = 182/386 (47%)
Query: 286 FDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKA-LVHQAEEDVRNKTANMEQ-----N 339
F +L +F L D+ G+EP+ +++ I G A +V AE + +EQ N
Sbjct: 300 FSELHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFN 359
Query: 340 LVGKILE--LHD--KFM-----AYVSICFGDHKLFLMALKEAFEVFCNESIVEISSAEIL 390
K+++ D +F+ AY ++ D +F + L + ++ E E+L
Sbjct: 360 RFSKLVKEAFQDDPRFLTARDKAYKAVV-NDATIFKLELPLKQKGVGLKTQPESKCPELL 418
Query: 391 ATFCDNLFKNSD-AEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGG 449
A +CD L + + ++KL+ E +E + +V+++L Y + KD+F +++ L RRL+ D
Sbjct: 419 ANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISA 478
Query: 450 NKDYDKTFLSKLKQHS-GGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSV 508
+ + ++ + L++ + K+ M D+ ++ + A + +N P +++
Sbjct: 479 DSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNI 538
Query: 509 MVLTTGSWP--SYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFE 566
+L G+W S K F ++LP+E+ + ++FY RKL W + + N + K E
Sbjct: 539 KILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNE 597
Query: 567 LKAIELIVSTYQAACLMLFNDADR--LSFSEILTQLNLNKGDLIRVLHSLSCS---KHKI 621
+ +L V+T+Q A L +N R +SF + L +L R L SL K ++
Sbjct: 598 VGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQV 657
Query: 622 LNKEPNT---KTISQSDSFEFNAKFT 644
L EP K ++ F N +F+
Sbjct: 658 LLYEPQVNSPKDFTEGTLFSVNQEFS 683
Score = 207 (77.9 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 90/405 (22%), Positives = 169/405 (41%)
Query: 3 SKKKLSFEESWALMEQXXXXXXXXXXXXPEPPFASEECMTLYTIVYDLCSIELPSAQDCS 62
+K L FE+ W M + ++ L++ V+ +C +
Sbjct: 4 NKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWD--DKGPAK 55
Query: 63 YSQRLYVKYGEVFEEHMQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDR 122
Q L E F + Q+ VL S +D +L+ ++ +W L + F L+
Sbjct: 56 IHQALKEDILE-FIKQAQARVL-SHQDDTA--LLKAYIVEWRKFFTQCDILPKPFCQLEI 111
Query: 123 FYVRSQ-AGLASLIEVPVV------VFRDRVYKDLKRDVRDTVIALIDEEREGEKIDRAL 175
+ Q + S +E +V + + ++ ++K ++D+ + L+ ER GE D L
Sbjct: 112 TLMGKQGSNKKSTVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQL 171
Query: 176 VKKAVDIFVGIGILDMD---FYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEE 232
V + +V + D YR +FE+ +D +Y +A S++ + YM A+
Sbjct: 172 VIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADA 231
Query: 233 CLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEK------- 285
LK+E RA+ Y TR E +E + + E + C+ +I + +
Sbjct: 232 KLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETESRYQY 291
Query: 286 --------FDDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANME 337
F +L +F L D+ G+EP+ +++ I G A + A E + T + E
Sbjct: 292 LCVEDGSGFSELHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETI---TTDSE 348
Query: 338 QNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIV 382
+ V ++L L ++F V F D FL A +A++ N++ +
Sbjct: 349 K-YVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATI 392
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 182 (69.1 bits), Expect = 8.2e-22, Sum P(3) = 8.2e-22
Identities = 40/140 (28%), Positives = 81/140 (57%)
Query: 601 NLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRIPLPPVDDR 660
++NK D+ ++ K+ + + S + S ++K T++ ++
Sbjct: 723 DVNKNDVFKLNAKFKSPSVKVKVLTVSASSSSSASSSSSSSKNTNKSVA---KTEQEEEL 779
Query: 661 REINEDVGKDRRHNIDAALVRIMKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDL 720
E+N ++ + R+ ++AA+VRI+KSR+ + + LI E ++ LS+ F+P I IK RI+DL
Sbjct: 780 EEVNANIMEGRKIEVNAAIVRILKSRQSIKHNDLIEELLKQLSNRFQPSIILIKQRIEDL 839
Query: 721 INREFIERDSKDPTMFNYSA 740
I++E+++RD+ D +++Y A
Sbjct: 840 IDKEYLKRDTDDRNLYHYIA 859
Score = 119 (46.9 bits), Expect = 8.2e-22, Sum P(3) = 8.2e-22
Identities = 54/233 (23%), Positives = 97/233 (41%)
Query: 316 DQGKALVHQAEEDVRNKTANMEQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEV 375
D ++ + + + N + + IL+ D+ M F ++ + A
Sbjct: 361 DYVRSSIENSGKKQSNNSPAFATKWIETILKYRDQLMQVWKNSFDENLMIEQTFTFAMRD 420
Query: 376 FCNESI----VEISSAEILATFCD----NLFKNSDAEK-LSDETVERTMDKV---IVLLG 423
F N S +++ E+L+ + D L K S + K +S ++ ++T D + I L
Sbjct: 421 FINGSNKRGPASVNAPELLSVYMDYFIKQLTKGSSSNKDISLKSGDQTEDLISNSIQFLR 480
Query: 424 YFKYKDLFAEFYRKKLARRLLFDKGGN-----KDYDKTFLSKLKQHSGGHFTTKMEGMIT 478
+ K KD F Y A+R L K GN KD ++ L+KL + G K+ M
Sbjct: 481 FIKDKDAFEANYANHFAKRFLNSKTGNSPSSNKDIEEIILAKLSEEMGTSSLDKVIKMNR 540
Query: 479 DVVLARENQTALDDWFSSNLNEKPQ----FDLSVMVLTTGSWPS-----YKFF 522
DV R ++ +DW LN++ + ++ + + WP YK+F
Sbjct: 541 DV---RSSKDTTNDW-KRYLNKQSKSTDLVEMELKICNVTDWPKSMTKDYKWF 589
Score = 110 (43.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 52/223 (23%), Positives = 93/223 (41%)
Query: 446 DKGGNKDYDKTFLSKLKQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNLNEKPQFD 505
D +KD + L + S +ME I +V ++ T WFS NE+ F
Sbjct: 541 DVRSSKDTTNDWKRYLNKQSKSTDLVEMELKICNVTDWPKSMTKDYKWFSRTENEETPF- 599
Query: 506 LSVMVLTTGSWPSYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKF 565
WP +K + F G K + L W G+ + +
Sbjct: 600 ---------KWPRQL-------RNTIKQFDEFWS-NGKKNDNKSLYWSPKFGSMDLRITY 642
Query: 566 ELKAIELIVSTYQAACLMLF----NDAD-----------RLSFSEILTQLNLNKGDLIRV 610
+ E+ +ST+ A ++LF +AD L++ EIL + + +L R
Sbjct: 643 PSRTYEINLSTFAAIIMLLFAPQSTNADGSTVSAFDEMKELTYEEILELTGIPEPELKRH 702
Query: 611 LHSLSCS-KHKILNKEPNTKTISQSDSFEFNAKFTDRMRRIRI 652
L S++ + K ++L K P +K ++++D F+ NAKF ++++
Sbjct: 703 LQSIAVAPKSRLLVKVPMSKDVNKNDVFKLNAKFKSPSVKVKV 745
Score = 88 (36.0 bits), Expect = 8.2e-22, Sum P(3) = 8.2e-22
Identities = 42/230 (18%), Positives = 104/230 (45%)
Query: 63 YSQRLYVKYGEVFEEHM--QSDVLPSFEDKRGEFMLREFVKQW-ENINVMGRWLLRFFEY 119
+ +LY V + H+ + + L S FM + +++W E++ M +++ Y
Sbjct: 75 FGGKLYDNVANVIKTHLLTRREKLLSVSANHDLFM-QSILQEWSEHLQAM-KFISDVLMY 132
Query: 120 LDRFYVRSQAGLASLIEVPVVVFRDRVYKDLKRDVRDTVIAL-IDE---EREGEKIDRAL 175
L++ YV L + ++ + +F+D V K +V ++ + IDE R G I ++
Sbjct: 133 LNKVYVAEHKKLL-IYDLGIQLFKDYVIKYNNDEVGSKIVNMVIDEIAKSRTGVVITSSM 191
Query: 176 -VKKAVDIFVGI----GILDM----DFYRQDFEEQMIDDAGCYYLRKASSWILNDSCPEY 226
+ K +++ + G D+ +Y+ FE + + + + ++ ++ +Y
Sbjct: 192 YITKIINMMELLVEPSGSSDILFGDSYYQIKFEPKFLKSSEESLYNLSQEFVSHNLGTKY 251
Query: 227 MIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSG 276
+ + +K E +R +Y + KL+E + + ++ ++++ + G
Sbjct: 252 LQLTTQFIKDEDNRVRFYLPPSTYPKLVELMNNIMIKDKIDKMILSSNQG 301
Score = 39 (18.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 152 RDVRDTVIALIDEEREGEKIDRALVKKAVDI 182
+D+ + ++A + EE +D+ ++K D+
Sbjct: 513 KDIEEIILAKLSEEMGTSSLDK-VIKMNRDV 542
>GENEDB_PFALCIPARUM|PFF1445c [details] [associations]
symbol:PFF1445c "cullin-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0051726 "regulation of
cell cycle" evidence=ISS] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL844505
RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3 PRIDE:C6KTD3
EnsemblProtists:PFF1445c:mRNA GeneID:3885751 KEGG:pfa:PFF1445c
EuPathDB:PlasmoDB:PF3D7_0629800 HOGENOM:HOG000281645
ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 122 (48.0 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 415 MDKVIVLLGYFKY---KDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTT 471
M+ + V+L F+Y K+ F ++YR + +RL+ D N D LK+ G FT
Sbjct: 698 MNMITVILSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGAQFTK 757
Query: 472 KMEGMITDVVLARENQTALDDWFSSNLNE-KPQFDLSVMVLTTGSWPSYKFFGLNLPSEM 530
K+E ++ D+ + +N+N + +V ++ SW + M
Sbjct: 758 KIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESWEYVNTENNVIYPPM 817
Query: 531 VKGV-ESFKKFYGTKTKARKLTWIYSLGNCHVNGKFE 566
+K E+F FY K++ + ++ LG C + F+
Sbjct: 818 IKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRVHFK 854
Score = 113 (44.8 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 59/234 (25%), Positives = 102/234 (43%)
Query: 177 KKAVD--IFVGIGILD-MDFYRQDFEEQMIDDAGCYYLRKASSWILN------DSCP-EY 226
KK D + + I I D ++ Y DFE ++ +Y K + + + C ++
Sbjct: 313 KKINDKVLSLSIKISDILNLY-DDFERIYKNETYTFYKEKIEKYKKDMETLGYEECNFDF 371
Query: 227 MIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKF 286
I E L E+ R+ + +E ++ ++ LLV +R+ L ++ S + I +EK+
Sbjct: 372 PIIVENYLCHEQIRSRKFLKEHTEITILNMLKDLLLVKNRDVLFKD--SYIKYCIIKEKY 429
Query: 287 DDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANME--QNLVGKI 344
D L ++ LY LE + IF + G LV+ DV NK N N + K+
Sbjct: 430 DPLRSVY-LYSLNLDDLENFSNIFFNVVDNIGTELVN----DVINKRNNSSLLNNAIIKL 484
Query: 345 LELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESI-VEISSAEILATFCDNL 397
+ + + F F+ +E FE F N+ I E IL+ + +NL
Sbjct: 485 INFKLNVDRIIIMSFRYSSYFMKKWREVFEHFINKGIQAETYMPIILSMYLNNL 538
Score = 105 (42.0 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 42/164 (25%), Positives = 79/164 (48%)
Query: 568 KAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSL-SCSKHKILNKEP 626
K I + V+ QA L+LFN + +EI ++ ++IR L ++ + + IL +
Sbjct: 960 KKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILIYDK 1019
Query: 627 NTKTISQSDSFEFNAKFTD-RMRRI--RIPLPPVDDRREINEDVG-KDRRHNIDAALVRI 682
+ + + SF KF + + + P +NED +D+ +IDAA+V+
Sbjct: 1020 ANEILKLNFSFRSKKKFLIVNYNDVLYKDDMGPTTSL--LNEDNEIEDKTLHIDAAIVKF 1077
Query: 683 MKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFI 726
+K+ +++ S + + S +IK +RI L++REFI
Sbjct: 1078 LKTNGKSSERKICSFIKDKMDISSNEQIK---NRISSLLSREFI 1118
Score = 37 (18.1 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 658 DDRREINEDVGKDRRHN 674
D++R+ N D +D +N
Sbjct: 920 DEKRDENNDKKRDENNN 936
>UNIPROTKB|C6KTD3 [details] [associations]
symbol:PFF1445c "Cullin-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AL844505 RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3
PRIDE:C6KTD3 EnsemblProtists:PFF1445c:mRNA GeneID:3885751
KEGG:pfa:PFF1445c EuPathDB:PlasmoDB:PF3D7_0629800
HOGENOM:HOG000281645 ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 122 (48.0 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 415 MDKVIVLLGYFKY---KDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTT 471
M+ + V+L F+Y K+ F ++YR + +RL+ D N D LK+ G FT
Sbjct: 698 MNMITVILSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGAQFTK 757
Query: 472 KMEGMITDVVLARENQTALDDWFSSNLNE-KPQFDLSVMVLTTGSWPSYKFFGLNLPSEM 530
K+E ++ D+ + +N+N + +V ++ SW + M
Sbjct: 758 KIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESWEYVNTENNVIYPPM 817
Query: 531 VKGV-ESFKKFYGTKTKARKLTWIYSLGNCHVNGKFE 566
+K E+F FY K++ + ++ LG C + F+
Sbjct: 818 IKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRVHFK 854
Score = 113 (44.8 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 59/234 (25%), Positives = 102/234 (43%)
Query: 177 KKAVD--IFVGIGILD-MDFYRQDFEEQMIDDAGCYYLRKASSWILN------DSCP-EY 226
KK D + + I I D ++ Y DFE ++ +Y K + + + C ++
Sbjct: 313 KKINDKVLSLSIKISDILNLY-DDFERIYKNETYTFYKEKIEKYKKDMETLGYEECNFDF 371
Query: 227 MIKAEECLKKERDRAVYYFHTRSESKLIEKVQHELLVVHRNQLLENEKSGCRALISQEKF 286
I E L E+ R+ + +E ++ ++ LLV +R+ L ++ S + I +EK+
Sbjct: 372 PIIVENYLCHEQIRSRKFLKEHTEITILNMLKDLLLVKNRDVLFKD--SYIKYCIIKEKY 429
Query: 287 DDLSRIFRLYDETRTGLEPVAGIFKQYFIDQGKALVHQAEEDVRNKTANME--QNLVGKI 344
D L ++ LY LE + IF + G LV+ DV NK N N + K+
Sbjct: 430 DPLRSVY-LYSLNLDDLENFSNIFFNVVDNIGTELVN----DVINKRNNSSLLNNAIIKL 484
Query: 345 LELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESI-VEISSAEILATFCDNL 397
+ + + F F+ +E FE F N+ I E IL+ + +NL
Sbjct: 485 INFKLNVDRIIIMSFRYSSYFMKKWREVFEHFINKGIQAETYMPIILSMYLNNL 538
Score = 105 (42.0 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 42/164 (25%), Positives = 79/164 (48%)
Query: 568 KAIELIVSTYQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSL-SCSKHKILNKEP 626
K I + V+ QA L+LFN + +EI ++ ++IR L ++ + + IL +
Sbjct: 960 KKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILIYDK 1019
Query: 627 NTKTISQSDSFEFNAKFTD-RMRRI--RIPLPPVDDRREINEDVG-KDRRHNIDAALVRI 682
+ + + SF KF + + + P +NED +D+ +IDAA+V+
Sbjct: 1020 ANEILKLNFSFRSKKKFLIVNYNDVLYKDDMGPTTSL--LNEDNEIEDKTLHIDAAIVKF 1077
Query: 683 MKSRKVLGYQQLISECVEMLSHSFKPEIKAIKSRIDDLINREFI 726
+K+ +++ S + + S +IK +RI L++REFI
Sbjct: 1078 LKTNGKSSERKICSFIKDKMDISSNEQIK---NRISSLLSREFI 1118
Score = 37 (18.1 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 658 DDRREINEDVGKDRRHN 674
D++R+ N D +D +N
Sbjct: 920 DEKRDENNDKKRDENNN 936
>UNIPROTKB|I3L5Y8 [details] [associations]
symbol:I3L5Y8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:DECMLRE Ensembl:ENSSSCT00000029748
Uniprot:I3L5Y8
Length = 225
Score = 209 (78.6 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 48/209 (22%), Positives = 106/209 (50%)
Query: 79 MQSDVLPSFEDKRGEFMLREFVKQWENINVMGRWLLRFFEYLDRFYVRSQAGLASLIEVP 138
++ DVL S + L+ + W + + Y+DR YV+ Q + ++ +
Sbjct: 17 VREDVLNSLNNN----FLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQ-QNNVENVYNLG 71
Query: 139 VVVFRDRV--YKDLKRDVRDTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQ 196
+++FRD+V Y ++ +R T++ +I ER+GE +DR ++ A + + +G+ Y +
Sbjct: 72 LIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEE 131
Query: 197 DFEEQMIDDAGCYYLRKASSWILNDSCPEYMIKAEECLKKERDRAVYYFHTRSESKLIEK 256
DFE ++ + ++ ++ ++ +S Y+ K E + +E +R ++ +E +++
Sbjct: 132 DFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKV 191
Query: 257 VQHELLVVHRNQLLENEKSGCRALISQEK 285
V+ EL+ H ++E E SG ++ K
Sbjct: 192 VERELISKHMKTIVEMENSGLVHMLKNGK 220
>UNIPROTKB|A6NE76 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002476
EMBL:AL451005 HGNC:HGNC:2555 IPI:IPI00644450
ProteinModelPortal:A6NE76 SMR:A6NE76 STRING:A6NE76 PRIDE:A6NE76
Ensembl:ENST00000371323 HOGENOM:HOG000006909 HOVERGEN:HBG084579
ArrayExpress:A6NE76 Bgee:A6NE76 Uniprot:A6NE76
Length = 234
Score = 195 (73.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 54/213 (25%), Positives = 105/213 (49%)
Query: 36 ASEECMTLYTIVYDLCSIELPSAQDCSY--SQRLYVKYGEVFEEHMQSDVLPSFEDKRGE 93
A E +I Y+L + CSY S LY + ++ E+H+++ + ED
Sbjct: 27 AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDS 86
Query: 94 FM-LREFVKQWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKDLK 151
+ L++ + W+N + ++R F +LDR YV + L S+ ++ + +FR + D K
Sbjct: 87 VLFLKKIDRCWQN-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQK 145
Query: 152 RDVR--DTVIALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCY 209
+ D ++ LI+ ER GE IDR+L++ + + + D+ Y+ FE++ +++
Sbjct: 146 VQNKTIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRL 200
Query: 210 YLRKASSWILNDSCPEYMIKAEECLKKERDRAV 242
Y + + PEY+ + L++E DR +
Sbjct: 201 YAAEGQKLMQEREVPEYLHHVNKRLEEEADRLI 233
>UNIPROTKB|F1NLT0 [details] [associations]
symbol:ANAPC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IEA] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0005680
OMA:MLRGVLF GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 EMBL:AADN02026919 IPI:IPI00604035
Ensembl:ENSGALT00000014053 Uniprot:F1NLT0
Length = 820
Score = 186 (70.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 64/239 (26%), Positives = 111/239 (46%)
Query: 402 DAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLL--FDKGGNKDYDKTFLS 459
DA+ + R+ D + +L+ + KDLF YR LA RLL F+ ++ L
Sbjct: 484 DADPGKSSSKRRSSDIISLLVSIYGSKDLFINEYRTLLADRLLHQFNYSAEREIRNVELL 543
Query: 460 KLK-QHSGGHFTTKMEGMITDVVLARE-NQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP 517
KL+ + H+ E M+ D+ +R N D+ E+P F L ++L++ WP
Sbjct: 544 KLRFGEAQMHYC---EVMLKDMADSRRINANIRDEEEKLPEEERPPFSLVAVILSSEFWP 600
Query: 518 SYKFFGLNLPSEMVKGVESFKKFYGTKTKA-RKLTWIYSLGNCHVNGKFELKAIELIVST 576
K L LP ++ + +E++ K Y K KA R L W Y LG ++ + + + L VS
Sbjct: 601 PLKEEKLELPEQVKEAMEAYSKKY-EKLKAMRTLNWKYHLGLVSLDVELADRTLSLSVSP 659
Query: 577 YQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSD 635
AA ++ F + +E+ L + L R + +L + + + P T T+ + +
Sbjct: 660 VHAAIILHFQTKSTWTLAELSEVLKVPVTSLKRKM-TLWLQQGVLREEPPGTFTVIEEE 717
>RGD|1305546 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005680
"anaphase-promoting complex" evidence=ISO] [GO:0031915 "positive
regulation of synaptic plasticity" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
[GO:0070979 "protein K11-linked ubiquitination" evidence=ISO]
[GO:0090129 "positive regulation of synapse maturation"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 RGD:1305546 GO:GO:0005634
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773
GO:GO:0006511 GO:GO:0005680 HOVERGEN:HBG045327 GO:GO:0090129
GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 EMBL:BC107471 IPI:IPI00373399
UniGene:Rn.20099 STRING:Q3B7T7 PhosphoSite:Q3B7T7 UCSC:RGD:1305546
InParanoid:Q3B7T7 ArrayExpress:Q3B7T7 Genevestigator:Q3B7T7
Uniprot:Q3B7T7
Length = 539
Score = 168 (64.2 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 58/239 (24%), Positives = 112/239 (46%)
Query: 402 DAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLL--FDKGGNKDYDKTFLS 459
DA+ + R+ D + +L+ + KDLF YR LA RLL F ++ L
Sbjct: 203 DADPAKSSSKRRSSDIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELL 262
Query: 460 KLK-QHSGGHFTTKMEGMITDVVLARE-NQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP 517
KL+ + HF E M+ D+ +R N ++ + E+P F + ++L++ WP
Sbjct: 263 KLRFGEAPMHFC---EVMLKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWP 319
Query: 518 SYKFFGLNLPSEMVKGVESFKKFYGTKTKA-RKLTWIYSLGNCHVNGKFELKAIELIVST 576
+K L +P ++ ++ + K Y K KA R L+W ++LG ++ + + + + V+
Sbjct: 320 PFKDEKLEVPEDIRAALDVYCKKY-EKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTP 378
Query: 577 YQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSD 635
QA L+ F D + E+ + + L+R S+ + + + P T ++ + +
Sbjct: 379 VQAVVLLYFQDQASWTLEELSKVVKMPVA-LLRRRMSVWLQQGVLREEPPGTFSVIEEE 436
>RGD|1563853 [details] [associations]
symbol:Cul4a "cullin 4A" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0051246 "regulation of
protein metabolic process" evidence=ISO] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISO] InterPro:IPR001373
Pfam:PF00888 RGD:1563853 GO:GO:0006511 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 IPI:IPI00952377
Ensembl:ENSRNOT00000066778 UCSC:RGD:1563853 ArrayExpress:D3ZL69
Uniprot:D3ZL69
Length = 255
Score = 159 (61.0 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 46/172 (26%), Positives = 88/172 (51%)
Query: 43 LYTIVYDLCSIELPSAQDCSYSQRLYVKYGEVFEEHMQSDVLPSFEDK-RGEFMLREFVK 101
LY V +LCS ++ S LY + +V E+H+Q+ +LP E L++
Sbjct: 86 LYQAVENLCSHKV--------SPTLYKQLRQVCEDHVQAQILPFREYPFLALLFLQKINT 137
Query: 102 QWENINVMGRWLLR-FFEYLDRFYVRSQAGLASLIEVPVVVFRDRVYKD--LKRDVRDTV 158
W++ + ++R F +LDR YV + L S+ ++ + +FR+ + D ++ D +
Sbjct: 138 CWQD-HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGI 196
Query: 159 IALIDEEREGEKIDRALVKKAVDIFVGIGILDMDFYRQDFEEQMIDDAGCYY 210
+ LI ER GE +DR+L++ + + + D+ Y+ FE + +++ C Y
Sbjct: 197 LLLIGRERSGEAVDRSLLRSLLSM-----LSDLQVYKDSFELKFLEETNCLY 243
>UNIPROTKB|Q9UJX6 [details] [associations]
symbol:ANAPC2 "Anaphase-promoting complex subunit 2"
species:9606 "Homo sapiens" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=IDA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=ISS] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0000079 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007067 GO:GO:0007094
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0051436
GO:GO:0045773 GO:GO:0004842 GO:GO:0005680 EMBL:AF191337
EMBL:AL929554 EMBL:BC032503 EMBL:BC001579 EMBL:BC009487
EMBL:AB037827 IPI:IPI00002549 IPI:IPI00375832 RefSeq:NP_037498.1
UniGene:Hs.533262 ProteinModelPortal:Q9UJX6 SMR:Q9UJX6
DIP:DIP-32957N IntAct:Q9UJX6 MINT:MINT-1196367 STRING:Q9UJX6
PhosphoSite:Q9UJX6 DMDM:37537863 PaxDb:Q9UJX6 PRIDE:Q9UJX6
DNASU:29882 Ensembl:ENST00000323927 GeneID:29882 KEGG:hsa:29882
UCSC:uc004clq.1 UCSC:uc004clr.1 CTD:29882 GeneCards:GC09M140069
HGNC:HGNC:19989 HPA:CAB018692 MIM:606946 neXtProt:NX_Q9UJX6
PharmGKB:PA134884359 eggNOG:COG5647 HOGENOM:HOG000033936
HOVERGEN:HBG045327 InParanoid:Q9UJX6 KO:K03349 OMA:MLRGVLF
OrthoDB:EOG4T1HM4 PhylomeDB:Q9UJX6 Reactome:REACT_8017
GenomeRNAi:29882 NextBio:52411 ArrayExpress:Q9UJX6 Bgee:Q9UJX6
CleanEx:HS_ANAPC2 CleanEx:HS_APC2 Genevestigator:Q9UJX6
GermOnline:ENSG00000176248 GO:GO:0031145 GO:GO:0008054
GO:GO:0090129 GO:GO:0031915 GO:GO:0051437 GO:GO:0070979
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
Uniprot:Q9UJX6
Length = 822
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 56/238 (23%), Positives = 109/238 (45%)
Query: 402 DAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLL--FDKGGNKDYDKTFLS 459
DA+ + R+ D + +L+ + KDLF YR LA RLL F ++ L
Sbjct: 486 DADPGKSSSKRRSSDIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELL 545
Query: 460 KLK-QHSGGHFTTKMEGMITDVVLARE-NQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP 517
KL+ + HF E M+ D+ +R N ++ E+P F + ++L++ WP
Sbjct: 546 KLRFGEAPMHFC---EVMLKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWP 602
Query: 518 SYKFFGLNLPSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTY 577
+K L +P ++ +E++ K Y R L+W ++LG ++ + + + + V+
Sbjct: 603 PFKDEKLEVPEDIRAALEAYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPV 662
Query: 578 QAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSD 635
QA L+ F D + E+ + + L+R S+ + + + P T ++ + +
Sbjct: 663 QAVILLYFQDQASWTLEELSKAVKMPVA-LLRRRMSVWLQQGVLREEPPGTFSVIEEE 719
>UNIPROTKB|F1PYP1 [details] [associations]
symbol:TMEM210 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 OMA:MLRGVLF
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00390000008939 EMBL:AAEX03006734
Ensembl:ENSCAFT00000030976 Uniprot:F1PYP1
Length = 885
Score = 166 (63.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 54/200 (27%), Positives = 96/200 (48%)
Query: 402 DAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLL--FDKGGNKDYDKTFLS 459
DA+ + R+ D + +L+ + KDLF YR LA RLL F ++ L
Sbjct: 482 DADPGKSSSKRRSSDIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELL 541
Query: 460 KLK-QHSGGHFTTKMEGMITDVVLARE-NQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP 517
KL+ + HF E M+ D+ +R N ++ E+P F + ++L++ WP
Sbjct: 542 KLRFGEAPMHFC---EVMLKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWP 598
Query: 518 SYKFFGLNLPSEMVKGVESFKKFYGTKTKA-RKLTWIYSLGNCHVNGKFELKAIELIVST 576
+K L +P ++ + +E + K Y K KA R L+W ++LG ++ + + + + V+
Sbjct: 599 PFKDEKLEVPEDIREALEVYCKKY-EKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTP 657
Query: 577 YQAACLMLFNDADRLSFSEI 596
QA L+ F D + E+
Sbjct: 658 VQAVVLLYFQDQATWTLEEL 677
>MGI|MGI:2139135 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0005680 "anaphase-promoting complex" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0045773 "positive regulation of axon extension"
evidence=ISO] [GO:0050775 "positive regulation of dendrite
morphogenesis" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISO] [GO:0090129 "positive regulation of synapse
maturation" evidence=IDA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 UniPathway:UPA00143
MGI:MGI:2139135 GO:GO:0051301 GO:GO:0007067 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773 GO:GO:0006511
GO:GO:0005680 CTD:29882 eggNOG:COG5647 HOVERGEN:HBG045327 KO:K03349
OMA:MLRGVLF OrthoDB:EOG4T1HM4 GO:GO:0090129 GO:GO:0031915
GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 EMBL:AK033784 EMBL:AK170676 EMBL:AL732309
EMBL:BC027351 EMBL:BC137583 IPI:IPI00227654 RefSeq:NP_780509.2
UniGene:Mm.291624 ProteinModelPortal:Q8BZQ7 SMR:Q8BZQ7
STRING:Q8BZQ7 PhosphoSite:Q8BZQ7 PaxDb:Q8BZQ7 PRIDE:Q8BZQ7
Ensembl:ENSMUST00000028341 GeneID:99152 KEGG:mmu:99152
GeneTree:ENSGT00390000016127 InParanoid:Q3TCK5 NextBio:353811
Bgee:Q8BZQ7 CleanEx:MM_ANAPC2 Genevestigator:Q8BZQ7
GermOnline:ENSMUSG00000026965 Uniprot:Q8BZQ7
Length = 837
Score = 165 (63.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/239 (23%), Positives = 113/239 (47%)
Query: 402 DAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLL--FDKGGNKDYDKTFLS 459
DA+ + + R+ D + +L+ + KDLF YR LA RLL F ++ L
Sbjct: 501 DADPVKSSSKRRSSDIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELL 560
Query: 460 KLK-QHSGGHFTTKMEGMITDVVLARE-NQTALDDWFSSNLNEKPQFDLSVMVLTTGSWP 517
KL+ + HF E M+ D+ +R N ++ + E+P F + ++L++ WP
Sbjct: 561 KLRFGEAPMHFC---EVMLKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWP 617
Query: 518 SYKFFGLNLPSEMVKGVESFKKFYGTKTKA-RKLTWIYSLGNCHVNGKFELKAIELIVST 576
+K L +P ++ ++ + K Y K KA R L+W ++LG ++ + + + + V+
Sbjct: 618 PFKDEKLEVPEDIRAALDVYCKKY-EKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTP 676
Query: 577 YQAACLMLFNDADRLSFSEILTQLNLNKGDLIRVLHSLSCSKHKILNKEPNTKTISQSD 635
QA L+ F + + E+ + + L+R S+ + + + P T ++ + +
Sbjct: 677 VQAVVLLYFQNQASWTLEELSKVVKMPVA-LLRRRMSVWLQQGVLREEPPGTFSVIEEE 734
>ASPGD|ASPL0000051025 [details] [associations]
symbol:AN10258 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GO:GO:0031461
EnsemblFungi:CADANIAT00008784 OMA:TWQATVI Uniprot:C8VLZ0
Length = 918
Score = 164 (62.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 57/228 (25%), Positives = 101/228 (44%)
Query: 408 DETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGG 467
D ++ D + L+ F K+ F R LA RLL K + + + L LK G
Sbjct: 566 DYRKSKSSDVIGSLISIFDSKETFVRELRDMLADRLL-QKRAEFEQEMSVLELLKLRFGD 624
Query: 468 HFTTKMEGMITDVVLARENQTAL-DDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNL 526
+ E M+ D+ +R T + +D +N ++ +L +L+ WP K +
Sbjct: 625 NALQACEVMLRDIFDSRRVDTVVRNDQGMTNSQDQETPELHAKILSHFFWPELKGHQFKV 684
Query: 527 PSEMVKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFN 586
PSE+ + + + + + + ++RKLTW+ G V E + VST+QA + FN
Sbjct: 685 PSEITELQQRYAEGFESLKQSRKLTWLNGFGQVTVELDLEDRVFVEEVSTWQATVIYAFN 744
Query: 587 D--ADRLSFSEILTQLNLNKGDLIRVLHSLSCS---KHKILNKEPNTK 629
A+ S S+ + +L+ D+ L +C +IL + P +
Sbjct: 745 SGTAESESVSKTIPELSAQL-DMSAALVRSACLFWVSRRILTEVPGQR 791
Score = 37 (18.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 138 PVVVFRDRVYKDLKRDVRD---TVIALI 162
P V DR+ + ++R +RD TV A++
Sbjct: 479 PKGVLLDRIARPIRRYLRDRDDTVNAIV 506
>ZFIN|ZDB-GENE-081104-256 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit
2" species:7955 "Danio rerio" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 ZFIN:ZDB-GENE-081104-256
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 CTD:29882
eggNOG:COG5647 HOGENOM:HOG000033936 HOVERGEN:HBG045327 KO:K03349
OrthoDB:EOG4T1HM4 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:CU468929 IPI:IPI00920305 RefSeq:NP_001243675.1
UniGene:Dr.105374 Ensembl:ENSDART00000133722 GeneID:100318335
KEGG:dre:100318335 Uniprot:B8JLK0
Length = 802
Score = 158 (60.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 56/211 (26%), Positives = 98/211 (46%)
Query: 404 EKLSDET--VERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
+ L+D+T R+ D + +L+ + K++F Y+ LA RLL N + + L
Sbjct: 463 DALTDKTGSKRRSSDIISLLVSIYGSKEIFVNEYKTVLADRLLHQLNYNTAREIRNVELL 522
Query: 462 KQHSGGHFTTKMEGMITDVVLARE-NQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYK 520
K G E M+ DV +R N ++ E+P LS M++++ WP K
Sbjct: 523 KLRFGESHMHYCEVMLKDVADSRRINSNIHEEERRLPAEEQPTLPLSAMIISSEFWPQLK 582
Query: 521 FFGLNLPSEMVKGVESFKKFYGTKTKA-RKLTWIYSLGNCHVNGKFELKAI-ELIVSTYQ 578
+ LP+ K +E + + K KA R L W LG+ ++ + E + I +L VS
Sbjct: 583 EEKMELPAVASKAMEDYTHRF-EKLKAMRTLRWKPQLGSVTLDLELEDRTITDLTVSPIH 641
Query: 579 AACLMLFNDADRLSFSEILTQLNLNKGDLIR 609
AA ++ F D + E+ L + + +++R
Sbjct: 642 AAIILHFQDKGTWTLEELSGVLGVPQ-EMVR 671
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 246 HTRSESKLIEKVQHELLVVHRNQLLE 271
H S +L+E+V E + +QL+E
Sbjct: 214 HILSRLQLLERVSSEAVTSILHQLIE 239
>FB|FBgn0002791 [details] [associations]
symbol:mr "morula" species:7227 "Drosophila melanogaster"
[GO:0000090 "mitotic anaphase" evidence=NAS] [GO:0005680
"anaphase-promoting complex" evidence=NAS;TAS;IPI] [GO:0051726
"regulation of cell cycle" evidence=TAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0045886 "negative
regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IMP] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 EMBL:AE013599 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0045886 GO:GO:0006511
GO:GO:0005680 KO:K03349 OMA:MLRGVLF InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GeneTree:ENSGT00390000016127
GO:GO:0050804 FlyBase:FBgn0002791 EMBL:AY129297 EMBL:BT031326
RefSeq:NP_611862.1 UniGene:Dm.759 SMR:Q9W1E5 IntAct:Q9W1E5
MINT:MINT-292405 STRING:Q9W1E5 EnsemblMetazoa:FBtr0072156
GeneID:45906 KEGG:dme:Dmel_CG3060 UCSC:CG3060-RA InParanoid:Q9W1E5
GenomeRNAi:45906 NextBio:838467 Uniprot:Q9W1E5
Length = 802
Score = 144 (55.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 42/184 (22%), Positives = 78/184 (42%)
Query: 413 RTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTK 472
R+ D + +++ + K+LF YR +A RLL N + + L LK G
Sbjct: 482 RSADIISMVVDIYGSKELFMTEYRNLMADRLLAQLDFNSEKEIRNLELLKIRFGESLLHS 541
Query: 473 MEGMITDVVLARENQTALDDWFSSNLNEKPQFDLSVMVLTTGSWPSYKFFGLNLPSEMVK 532
E M+ DV ++ + + E FD+S ++++ WPS+ L LP E+
Sbjct: 542 CEVMLKDVTDSKRINAHIHS--DGDRTENQLFDISSLIVSAQFWPSFNKESLQLPEEIEN 599
Query: 533 GVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLS 592
+ + K Y R L W G ++ + + +E++VS A + F + +
Sbjct: 600 EFKKYTKAYEAYKGNRTLNWRTVTGRVNIEIEIGDRTMEMVVSPILAVIIYHFQTKNEWT 659
Query: 593 FSEI 596
++
Sbjct: 660 IEDL 663
Score = 49 (22.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 24/112 (21%), Positives = 49/112 (43%)
Query: 328 DVRNKTANM---EQNLVGKILELHDKFMAYVSICFGDHKLFLMALKEAFEVFCNESIVEI 384
D+ NKT NM E NL+ ++ A + + +H +F + ++
Sbjct: 220 DMVNKT-NMKLFEMNLIDRLTG--SALTALIKLKIKEH-----ISDTCMGIFDRSHLKQL 271
Query: 385 SS--AEILATFCDNLFKN-SDAEKLSDETVERTMDKVIVLLGYFKYKDLFAE 433
+ ++++ ++ N+F + +SD V ++ V L YF Y + FA+
Sbjct: 272 ETWLSDVIMSWLTNIFTEWKSKDSISDIEVPESVKSFKVKLTYFMY-ETFAQ 322
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 144 (55.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 402 DAEKLSDETVERTMDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKL 461
+A+ L +R +D + +L+ K+ YR LA +LL + D + + L
Sbjct: 524 EADPLKGSLSQRKVDILGMLVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELL 583
Query: 462 KQHSGGHFTTKMEGMITDVVLARENQTALDDWFSSNL----NEKPQFDLSVMVLTTGSWP 517
K H G + E M+ D++ ++ T + + NE L+ +L+T WP
Sbjct: 584 KIHFGEASMQRCEIMLNDLIDSKRVNTNIKKASQTGAELRENELSVDTLTSTILSTNFWP 643
Query: 518 SYKFFGLNLPSEMVKGVESF-KKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVST 576
+ L LP + K + + +++ KT RKL W +LG + +FE +A++ VS
Sbjct: 644 PIQDEPLELPGPVDKLLSDYANRYHEIKTP-RKLLWKKNLGTVKLELQFEDRAMQFTVSP 702
Query: 577 YQAACLMLFNDADRLSFSEI 596
AA +M F + ++ ++
Sbjct: 703 THAAIIMQFQEKKSWTYKDL 722
>WB|WBGene00000143 [details] [associations]
symbol:apc-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 GO:GO:0009792 GO:GO:0007126 GO:GO:0006898
GO:GO:0051301 GO:GO:0007067 GO:GO:0040035 GO:GO:0040039
GO:GO:0006511 KO:K03349 InterPro:IPR014786 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:FO080533 PIR:S44845 PIR:S44846 RefSeq:NP_498762.2
ProteinModelPortal:P34514 SMR:P34514 IntAct:P34514
MINT:MINT-1054240 STRING:P34514 PaxDb:P34514 EnsemblMetazoa:K06H7.6
GeneID:176139 KEGG:cel:CELE_K06H7.6 UCSC:K06H7.6 CTD:176139
WormBase:K06H7.6 eggNOG:NOG306201 HOGENOM:HOG000022396
InParanoid:P34514 OMA:HEINAEL NextBio:891294 Uniprot:P34514
Length = 731
Score = 132 (51.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 39/193 (20%), Positives = 88/193 (45%)
Query: 415 MDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKME 474
+D +L+ + K+LF + YR LA RL + +++K +L LK E
Sbjct: 399 VDVFNMLVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCE 458
Query: 475 GMITDVVLARENQTALDDWF--SSNLNEKPQFDLSVMVLTTGSWPSYKFFGLN--LPSEM 530
M+ DV+ + + +D S+ + P +S ++++ WP + +P +
Sbjct: 459 VMLRDVIHSLDIDKKFEDMSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPL 518
Query: 531 VKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADR 590
++ +++ Y + RKL W+ S+G V+ + ++ + A L LF + +
Sbjct: 519 QAAMDVYQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKET 578
Query: 591 LSFSEILTQLNLN 603
+ +E++ ++ ++
Sbjct: 579 WTTAEVVEKMGMS 591
>UNIPROTKB|P34514 [details] [associations]
symbol:apc-2 "Anaphase-promoting complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 GO:GO:0009792
GO:GO:0007126 GO:GO:0006898 GO:GO:0051301 GO:GO:0007067
GO:GO:0040035 GO:GO:0040039 GO:GO:0006511 KO:K03349
InterPro:IPR014786 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 GO:GO:0031461 EMBL:FO080533 PIR:S44845
PIR:S44846 RefSeq:NP_498762.2 ProteinModelPortal:P34514 SMR:P34514
IntAct:P34514 MINT:MINT-1054240 STRING:P34514 PaxDb:P34514
EnsemblMetazoa:K06H7.6 GeneID:176139 KEGG:cel:CELE_K06H7.6
UCSC:K06H7.6 CTD:176139 WormBase:K06H7.6 eggNOG:NOG306201
HOGENOM:HOG000022396 InParanoid:P34514 OMA:HEINAEL NextBio:891294
Uniprot:P34514
Length = 731
Score = 132 (51.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 39/193 (20%), Positives = 88/193 (45%)
Query: 415 MDKVIVLLGYFKYKDLFAEFYRKKLARRLLFDKGGNKDYDKTFLSKLKQHSGGHFTTKME 474
+D +L+ + K+LF + YR LA RL + +++K +L LK E
Sbjct: 399 VDVFNMLVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCE 458
Query: 475 GMITDVVLARENQTALDDWF--SSNLNEKPQFDLSVMVLTTGSWPSYKFFGLN--LPSEM 530
M+ DV+ + + +D S+ + P +S ++++ WP + +P +
Sbjct: 459 VMLRDVIHSLDIDKKFEDMSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPL 518
Query: 531 VKGVESFKKFYGTKTKARKLTWIYSLGNCHVNGKFELKAIELIVSTYQAACLMLFNDADR 590
++ +++ Y + RKL W+ S+G V+ + ++ + A L LF + +
Sbjct: 519 QAAMDVYQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKET 578
Query: 591 LSFSEILTQLNLN 603
+ +E++ ++ ++
Sbjct: 579 WTTAEVVEKMGMS 591
>UNIPROTKB|H7C399 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
EMBL:AC073052 EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3
ProteinModelPortal:H7C399 SMR:H7C399 Ensembl:ENST00000451538
Uniprot:H7C399
Length = 111
Score = 74 (31.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 697 ECVEMLSHSFKPEIKAIKSRIDDLINREFIERDSKDPTMFNYSA 740
E + L F P IK RI+ LI RE++ R +D ++ Y A
Sbjct: 68 EVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 111
Score = 70 (29.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 556 LGNCHVNGKFELKAIELIVSTYQAACLMLFNDADRLSFSEILTQL 600
+G V G K I L VST+Q LMLFN+ ++ +F E+ QL
Sbjct: 31 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTF-EVTQQL 73
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 740 728 0.00086 121 3 11 22 0.36 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 624 (66 KB)
Total size of DFA: 384 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.67u 0.11s 63.78t Elapsed: 00:00:04
Total cpu time: 63.72u 0.11s 63.83t Elapsed: 00:00:04
Start: Tue May 21 07:43:46 2013 End: Tue May 21 07:43:50 2013
WARNINGS ISSUED: 1