BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004650
(740 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure
pdb|3IHY|B Chain B, Human Pik3c3 Crystal Structure
pdb|3IHY|C Chain C, Human Pik3c3 Crystal Structure
pdb|3IHY|D Chain D, Human Pik3c3 Crystal Structure
pdb|3IHY|E Chain E, Human Pik3c3 Crystal Structure
Length = 600
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/405 (47%), Positives = 256/405 (63%), Gaps = 2/405 (0%)
Query: 331 LSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGV-DGEDG 389
L FL+ R+ N LA++L WYV VE D +R THE+ M + + + G+
Sbjct: 196 LCTFLISRACKNSTLANYLYWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKS 255
Query: 390 YKLWQSLVR-QTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXXXXXXTYFEEPIRSP 448
++ +SL+ Q +L +M+ V GN +KK E+ E I P
Sbjct: 256 VRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLP 315
Query: 449 LAPNILITGIVPSESSIFKSALHPLRLTFRTASGGTCKMIFKKGDDIRQDQLVVQMVSLM 508
L P + I GI+P +++FKSAL P +L F+T GG +IFK GDD+RQDQL++Q++SLM
Sbjct: 316 LEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLM 375
Query: 509 DRLLKLENLDLHLTPYNVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPDEHGP 568
D+LL+ ENLDL LTPY VLAT G ++FI S +A++L SI ++ +K+ P E+GP
Sbjct: 376 DKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGP 435
Query: 569 FGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXXXXXXXXFHVDFGYILGRDPKPFP 628
GI+A ++T++KSCAGY VITYILG+G FH+DFGYILGRDPKP P
Sbjct: 436 NGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLP 495
Query: 629 PPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASD 688
PPMKL KEMVE MGG +S+ Y F+ C A+ LR+ SNLILNLF LM +NIPDIA +
Sbjct: 496 PPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALE 555
Query: 689 PEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIH 733
P+K + K+Q+KFRLDL DE VH+ Q LI+ESV ALF +VE IH
Sbjct: 556 PDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIH 600
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 94/127 (74%)
Query: 201 DRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDV 260
D DLKP+ A R + I+ YPPT+ L+ +E+ L+WKFR+ L ++++ALTKFL+ V W
Sbjct: 4 DHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLP 63
Query: 261 QEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQA 320
QEAKQALEL+G+W+ +DV D+LELLS + + VR YAV L +ADD++L YLLQLVQA
Sbjct: 64 QEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQA 123
Query: 321 LRFERSD 327
L++E D
Sbjct: 124 LKYENFD 130
>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
pdb|3LS8|B Chain B, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
Length = 614
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 191/405 (47%), Positives = 256/405 (63%), Gaps = 2/405 (0%)
Query: 331 LSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGV-DGEDG 389
L FL+ R+ N LA++L WYV VE D +R THE+ M + + + G+
Sbjct: 210 LCTFLISRACKNSTLANYLYWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKS 269
Query: 390 YKLWQSLVR-QTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXXXXXXTYFEEPIRSP 448
++ +SL+ Q +L +M+ V GN +KK E+ E I P
Sbjct: 270 VRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLP 329
Query: 449 LAPNILITGIVPSESSIFKSALHPLRLTFRTASGGTCKMIFKKGDDIRQDQLVVQMVSLM 508
L P + I GI+P +++FKSAL P +L F+T GG +IFK GDD+RQDQL++Q++SLM
Sbjct: 330 LEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLM 389
Query: 509 DRLLKLENLDLHLTPYNVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPDEHGP 568
D+LL+ ENLDL LTPY VLAT G ++FI S +A++L SI ++ +K+ P E+GP
Sbjct: 390 DKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGP 449
Query: 569 FGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXXXXXXXXFHVDFGYILGRDPKPFP 628
GI+A ++T++KSCAGY VITYILG+G FH+DFGYILGRDPKP P
Sbjct: 450 NGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLP 509
Query: 629 PPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASD 688
PPMKL KEMVE MGG +S+ Y F+ C A+ LR+ SNLILNLF LM +NIPDIA +
Sbjct: 510 PPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALE 569
Query: 689 PEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIH 733
P+K + K+Q+KFRLDL DE VH+ Q LI+ESV ALF +VE IH
Sbjct: 570 PDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIH 614
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 103/144 (71%)
Query: 184 SEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMS 243
S K KLARSL G D DLKP+ A R + I+ YPPT+ L+ +E+ L+WKFR+ L +
Sbjct: 1 SMSKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTN 60
Query: 244 EKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILE 303
+++ALTKFL+ V W QEAKQALEL+G+W+ +DV D+LELLS + + VR YAV L
Sbjct: 61 QEKALTKFLKCVNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLR 120
Query: 304 RADDDELQCYLLQLVQALRFERSD 327
+ADD++L YLLQLVQAL++E D
Sbjct: 121 QADDEDLLMYLLQLVQALKYENFD 144
>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6F|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6H|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6H|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6I|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6I|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6J|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6J|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6K|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
pdb|2X6K|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
Length = 696
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/432 (42%), Positives = 264/432 (61%), Gaps = 7/432 (1%)
Query: 315 LQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILE 374
L L + + F S + L FL+QR+ N LA++ WY+S+E + ++ +
Sbjct: 265 LMLAEGISFG-SVPANLCTFLIQRACTNATLANYFYWYLSIEVEEVESVRKQDERAHDMY 323
Query: 375 ESMMKLTPGVDGEDGYKL---WQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXX 431
++K+ V + L + +L +Q +L +++ V GN KK EK
Sbjct: 324 AMVLKMFLKVLENGNFNLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLL 383
Query: 432 XXXXXXXTYFE--EPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-SGGTCKMI 488
F EPI PL P I IT IVP +S+FKSAL P +LTF T+ + I
Sbjct: 384 AEQDMFKVNFTNFEPIPFPLDPEIYITKIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAI 443
Query: 489 FKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIPSRSLAQIL 548
FK GDD+RQDQL++QM++LMD+LL+ ENLDL LTPY VLAT G L+++ S ++A++L
Sbjct: 444 FKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPYKVLATSSKHGFLQYVDSCTVAEVL 503
Query: 549 SEHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXXXXX 608
+ +I ++ +K HP ++GP+GI+A ++T+IKSCAGY VITY+LG+G
Sbjct: 504 AREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNLLLTTN 563
Query: 609 XXXFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSN 668
FH+DFGYILGRDPKP PPPMKL KEMVEAMGG S+++ F+ C AY LR+ +N
Sbjct: 564 GKLFHIDFGYILGRDPKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCYTAYLHLRRHAN 623
Query: 669 LILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQM 728
++LNLF LM + +PDIA +P+K + K++E +L L DE V Q L++ S++A+ P +
Sbjct: 624 VMLNLFSLMVDATVPDIALEPDKAVKKVEENLQLGLTDEEAVQHLQSLLDVSITAVMPAL 683
Query: 729 VETIHRWAQYWR 740
VE IHR+ QYWR
Sbjct: 684 VEQIHRFTQYWR 695
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 175 DPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRIL-KYPPTRTLSGDEKQL 233
D E+ N E K +LARS GI DRD KP+ + R + I+ +YPPT LS +E+ L
Sbjct: 5 DSEIQMENLVERKHHRLARSERSGISDRDAKPTASIRDQLHTIVYRYPPTYVLSSEEQDL 64
Query: 234 LWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEE 293
+WKFRF L S K+ALTKFL+ + W E QAL ++ W +DV DALELLSP F +
Sbjct: 65 VWKFRFYLSSHKKALTKFLKCINWKLEDEVTQALWMLANWAPMDVEDALELLSPTFTHPQ 124
Query: 294 VRAYAVCILERADDDE 309
VR YAV L +A D++
Sbjct: 125 VRKYAVSRLAQAPDED 140
>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Pik-39.
pdb|2WXG|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw13.
pdb|2WXH|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw14.
pdb|2WXI|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Sw30.
pdb|2WXJ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink654.
pdb|2WXK|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink666.
pdb|2WXL|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Zstk474.
pdb|2WXM|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Dl06.
pdb|2WXN|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Dl07.
pdb|2WXO|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As5.
pdb|2WXP|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Gdc-0941.
pdb|2WXQ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As15.
pdb|2WXR|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta.
pdb|2X38|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ic87114
Length = 940
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 277/600 (46%), Gaps = 54/600 (9%)
Query: 153 DSGANFLLPA------PITSTNELVIVWDPEVGK---INPSEHKQLKLARSLTRGIIDRD 203
D L PA P T + ++++ PEV P+ K L+L R RG I +
Sbjct: 343 DEKGELLNPAGTVRGNPNTESAAALVIYLPEVAPHPVYFPALEKILELGRHGERGRITEE 402
Query: 204 LKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSE-KRALTKFLRSVEWSDVQE 262
E+ ++ IL+ + L EK L+WK R + AL + L +W+ ++
Sbjct: 403 ------EQLQLREILERRGSGELYEHEKDLVWKMRHEVQEHFPEALARLLLVTKWNKHED 456
Query: 263 AKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
Q L L+ W + V ALELL F V ++A+ L + DDEL YLLQLVQ L+
Sbjct: 457 VAQMLYLLCSWPELPVLSALELLDFSFPDCYVGSFAIKSLRKLTDDELFQYLLQLVQVLK 516
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
+E L++FL+ R+ N ++ FL W++ E H P A RF I+E T
Sbjct: 517 YESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALRF---GLIMEAYCRGSTH 573
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIE-KXXXXXXXXXXXXTYF 441
+ + L++Q E ++L + D V+ ++QK + + TY
Sbjct: 574 HM---------KVLMKQGEALSKL-KALNDF--VKVSSQKTTKPQTKEMMHMCMRQETYM 621
Query: 442 E--EPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRT---ASGGTCKMIFKKGDDIR 496
E ++SPL P+ L+ + + + S + PL + + + S G +IFK GDD+R
Sbjct: 622 EALSHLQSPLDPSTLLEEVCVEQCTFMDSKMKPLWIMYSSEEAGSAGNVGIIFKNGDDLR 681
Query: 497 QDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIPSRSLAQILSEHRSIIS 556
QD L +QM+ LMD L K E LDL +TPY L TG GL+E + + ++S ++
Sbjct: 682 QDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIANIQLNKSNMA 741
Query: 557 YLQKFHPD-------EHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXXXXXX 609
F+ D P +E F SCAGY V TY+LGIG
Sbjct: 742 ATAAFNKDALLNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESG 801
Query: 610 XXFHVDFGYILGRDPKPFP-----PPMKLCKEMVEAMGGAE---SQYYTRFKSYCCEAYN 661
FH+DFG+ LG F P L + V + + S+ + RF+ YC AY
Sbjct: 802 QLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYT 861
Query: 662 ILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESV 721
ILR+ L L+LF LM + +P+++ K I L++ L +E + F+ NE++
Sbjct: 862 ILRRHGLLFLHLFALMRAAGLPELSCS--KDIQYLKDSLALGKTEEEALKHFRVKFNEAL 919
>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
pdb|4AJW|B Chain B, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
Length = 934
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 275/600 (45%), Gaps = 55/600 (9%)
Query: 153 DSGANFLLPA------PITSTNELVIVWDPEVGK---INPSEHKQLKLARSLTRGIIDRD 203
D L PA P T + ++++ PEV P+ K L+L R RG I
Sbjct: 338 DEKGELLNPAGTVRGNPNTESAAALVIYLPEVAPHPVYFPALEKILELGRHGERGRI--- 394
Query: 204 LKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSE-KRALTKFLRSVEWSDVQE 262
E ++ IL+ + L EK L+WK R + AL + L +W+ ++
Sbjct: 395 ----TEEELQLREILERRGSGELYEHEKDLVWKMRHEVQEHFPEALARLLLVTKWNKHED 450
Query: 263 AKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
Q L L+ W + V ALELL F V ++A+ L + DDEL YLLQLVQ L+
Sbjct: 451 VAQMLYLLCSWPELPVLSALELLDFSFPDCYVGSFAIKSLRKLTDDELFQYLLQLVQVLK 510
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
+E L++FL+ R+ N ++ FL W++ E H P A RF I+E T
Sbjct: 511 YESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALRF---GLIMEAYCRGSTH 567
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIE-KXXXXXXXXXXXXTYF 441
+ + L++Q E ++L + D V+ ++QK + + TY
Sbjct: 568 HM---------KVLMKQGEALSKL-KALNDF--VKVSSQKTTKPQTKEMMHMCMRQETYM 615
Query: 442 E--EPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRT---ASGGTCKMIFKKGDDIR 496
E ++SPL P+ L+ + + + S + PL + + + S G +IFK GDD+R
Sbjct: 616 EALSHLQSPLDPSTLLEEVCVEQCTFMDSKMKPLWIMYSSEEAGSAGNVGIIFKNGDDLR 675
Query: 497 QDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIPSRSLAQILSEHRSIIS 556
QD L +QM+ LMD L K E LDL +TPY L TG GL+E + + ++S ++
Sbjct: 676 QDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIANIQLNKSNMA 735
Query: 557 YLQKFHPD-------EHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXXXXXX 609
F+ D P +E F SCAGY V TY+LGIG
Sbjct: 736 ATAAFNKDALLNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESG 795
Query: 610 XXFHVDFGYILGRDPKPFP-----PPMKLCKEMVEAMGGAE---SQYYTRFKSYCCEAYN 661
FH+DFG+ LG F P L + V + + S+ + RF+ YC AY
Sbjct: 796 QLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYT 855
Query: 662 ILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESV 721
ILR+ L L+LF LM + +P+++ K I L++ L +E + F+ NE++
Sbjct: 856 ILRRHGLLFLHLFALMRAAGLPELSCS--KDIQYLKDSLALGKTEEEALKHFRVKFNEAL 913
>pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 257/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 411 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 470
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 471 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 530
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 531 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 586
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 587 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 640
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 641 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 700
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 701 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 760
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 761 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 816
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 817 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 875
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P++ S ++ I +++ + ++E +F D
Sbjct: 876 VKAYLALRHHTNLLIILFSMMLMTGMPELTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 933
Query: 717 I 717
I
Sbjct: 934 I 934
>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8Z|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|2A4Z|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As604850
pdb|2A5U|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As605240
pdb|2CHW|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110 Alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-39
pdb|2CHX|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-90
pdb|2CHZ|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-93
pdb|3DPD|A Chain A, Achieving Multi-Isoform Pi3k Inhibition In A Series Of
Substituted 3,4-Dihydro-2h-Benzo[1,4]oxazines
pdb|2V4L|A Chain A, Complex Of Human Phosphoinositide 3-kinase Catalytic
Subunit Gamma (p110 Gamma) With Pik-284
pdb|3IBE|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Bound
To Pi3 Kinase Gamma
pdb|3LJ3|A Chain A, Pi3-Kinase-Gamma With A Pyrrolopyridine-Benzofuran
Inhibitor
pdb|3ML8|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3ML9|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3MJW|A Chain A, Pi3 Kinase Gamma With A Benzofuranone Inhibitor
pdb|3P2B|A Chain A, Crystal Structure Of Pi3k Gamma With
3-(2-Morpholino-6-(Pyridin-3-
Ylamino)pyrimidin-4-Yl)phenol
pdb|3SD5|A Chain A, Crystal Structure Of Pi3k Gamma With
5-(2,4-Dimorpholinopyrimidin-6-
Yl)-4-(Trifluoromethyl)pyridin-2-Amine
pdb|3TJP|A Chain A, Crystal Structure Of Pi3k Gamma With
N6-(3,4-Dimethoxyphenyl)-2-
Morpholino-[4,5'-Bipyrimidine]-2',6-Diamine
pdb|4FUL|A Chain A, Pi3 Kinase Gamma Bound To A Pyrmidine Inhibitor
Length = 966
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 407 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 466
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 467 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 526
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 527 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 582
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 583 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 636
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 637 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 696
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 697 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 756
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 757 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 812
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 813 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 871
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 872 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 929
Query: 717 I 717
I
Sbjct: 930 I 930
>pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor
Length = 959
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 406 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 465
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 466 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 525
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 526 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 581
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 582 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 635
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 636 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 695
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 696 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 755
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 756 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 811
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 812 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 870
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 871 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 928
Query: 717 I 717
I
Sbjct: 929 I 929
>pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors.
pdb|4ANW|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 411 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 470
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 471 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 530
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 531 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 586
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 587 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 640
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 641 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 700
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 701 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 760
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 761 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 816
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 817 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 875
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 876 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 933
Query: 717 I 717
I
Sbjct: 934 I 934
>pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941
pdb|3L13|A Chain A, Crystal Structures Of Pan-Pi3-Kinase And Dual
Pan-Pi3-KinaseMTOR Inhibitors
pdb|4AOF|A Chain A, Selective Small Molecule Inhibitor Discovered By
Chemoproteomic Assay Platform Reveals Regulation Of Th17
Cell Differentiation By Pi3kgamma
Length = 960
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 407 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 466
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 467 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 526
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 527 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 582
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 583 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 636
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 637 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 696
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 697 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 756
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 757 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 812
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 813 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 871
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 872 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 929
Query: 717 I 717
I
Sbjct: 930 I 930
>pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor E5e2
pdb|3CSF|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor Dw2
pdb|3L16|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L17|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L08|A Chain A, Structure Of Pi3k Gamma With A Potent Inhibitor:
Gsk2126458
pdb|3OAW|A Chain A, 4-Methylpteridineones As Orally Active And Selective
Pi3kMTOR DUAL Inhibitors
pdb|3PRE|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PRZ|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PS6|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3R7Q|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3- Kinase
pdb|3R7R|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3-Kinase
pdb|3ZVV|A Chain A, Fragment Bound To Pi3kinase Gamma
pdb|3ZW3|A Chain A, Fragment Based Discovery Of A Novel And Selective Pi3
Kinase Inhibitor
pdb|3TL5|A Chain A, Discovery Of Gdc-0980: A Potent, Selective, And Orally
Available Class I Phosphatidylinositol 3-Kinase
(Pi3k)MAMMALIAN TARGET OF RAPAMYCIN (Mtor) Kinase
Inhibitor For The Treatment Of Cancer
pdb|3T8M|A Chain A, Rational Design Of Pi3k-Alpha Inhibitors That Exhibit
Selectivity Over The Pi3k-Beta Isoform
pdb|4GB9|A Chain A, Potent And Highly Selective Benzimidazole Inhibitors Of
Pi3k-Delta
pdb|4G11|A Chain A, X-Ray Structure Of Pi3k-Gamma Bound To A
4-(Morpholin-4-Yl)- (6-Oxo-1,
6-Dihydropyrimidin-2-Yl)amide Inhibitor
pdb|4HLE|A Chain A, Compound 21 (1-alkyl-substituted 1,2,4-triazoles)
Length = 966
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 407 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 466
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 467 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 526
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 527 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 582
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 583 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 636
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 637 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 696
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 697 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 756
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 757 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 812
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 813 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 871
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 872 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 929
Query: 717 I 717
I
Sbjct: 930 I 930
>pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine Inhibitor
Length = 959
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 406 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 465
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 466 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 525
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 526 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 581
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 582 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 635
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 636 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 695
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 696 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 755
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 756 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 811
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 812 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 870
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 871 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 928
Query: 717 I 717
I
Sbjct: 929 I 929
>pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex
Length = 965
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 406 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 465
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 466 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 525
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 526 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 581
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 582 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 635
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 636 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 695
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 696 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 755
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 756 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 811
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 812 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 870
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 871 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 928
Query: 717 I 717
I
Sbjct: 929 I 929
>pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 1
pdb|3QAR|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 32
pdb|3QJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 1
pdb|3QK0|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 82
pdb|3S2A|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With A
Quinoline Inhibitor
pdb|4FHJ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Imidazopyridine 2
pdb|4F1S|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine-Sulfonamide Inhibitor
pdb|4FLH|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Amg511
pdb|4FJY|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Quinoline-Indoline Inhibitor 24f
pdb|4FJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Pyrrolo-Pyridine Inhibitor 63
Length = 960
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 407 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 466
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 467 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 526
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 527 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 582
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 583 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 636
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 637 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 696
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 697 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 756
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 757 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 812
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 813 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 871
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 872 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 929
Query: 717 I 717
I
Sbjct: 930 I 930
>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase
Enzymatic Mechanism And Signalling
pdb|1E90|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E7V|A Chain A, Structure Determinants Of Phosphoinositide 3-kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8W|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + + +A K SV+W + +
Sbjct: 408 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKDPKAYPKLFSSVKWGQQEIVAKTY 467
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ + E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 468 QLLAKREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 527
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 528 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 583
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXXXXXXTYFE 442
G + +Q ++ L + D+ ++ +
Sbjct: 584 ------GTAMLHDFTQQVQVIDMLQKVTIDIKSLSAEKYDVSSQVISQLKQKLENLQNLN 637
Query: 443 EP--IRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
P R P P + +V + + S PL L F+ A S T +IFK GDD+
Sbjct: 638 LPQSFRVPYDPGLKAGALVIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 697
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILSEHRSI 554
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I +S
Sbjct: 698 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKI---QQST 754
Query: 555 ISYLQKFHPDEHGPFGITATC---------LETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ F DE + C +E F+ SCAGY V T++LGIG
Sbjct: 755 VGNTGAFK-DEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 813
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 814 SETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVC 872
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + +E +F D
Sbjct: 873 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKSEEDAKKYFLDQ 930
Query: 717 I 717
I
Sbjct: 931 I 931
>pdb|1E7U|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + + +A K SV+W + +
Sbjct: 408 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKDPKAYPKLFSSVKWGQQEIVAKTY 467
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ + E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 468 QLLAKREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 527
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 528 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 583
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXXXXXXTYFE 442
G + +Q ++ L + D+ ++ +
Sbjct: 584 ------GTAMLHDFTQQVQVIDMLQKVTIDIKSLSAEKYDVSSQVISQLKQKLENLQNLN 637
Query: 443 EP--IRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
P R P P + +V + + S PL L F+ A S T +IFK GDD+
Sbjct: 638 LPQSFRVPYDPGLKAGALVIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 697
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILSEHRSI 554
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I +S
Sbjct: 698 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKI---QQST 754
Query: 555 ISYLQKFHPDEHGPFGITATC---------LETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ F DE + C +E F+ SCAGY V T++LGIG
Sbjct: 755 VGNTGAFK-DEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 813
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 814 SETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVC 872
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + +E +F D
Sbjct: 873 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKSEEDAKKYFLDQ 930
Query: 717 I 717
I
Sbjct: 931 I 931
>pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
pdb|3NZU|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
Length = 954
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 403 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 462
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 463 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 522
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 523 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 578
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 579 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 632
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 633 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 692
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 693 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 752
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 753 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 808
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 809 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 867
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 868 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 925
Query: 717 I 717
I
Sbjct: 926 I 926
>pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5132799
pdb|3APD|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5108134
pdb|3APF|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5039699
Length = 966
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 256/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 413 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 472
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 473 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 532
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 533 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 588
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 589 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 642
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 643 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 702
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 703 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 762
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 763 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 818
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 819 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 877
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 878 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 935
Query: 717 I 717
I
Sbjct: 936 I 936
>pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor
Length = 966
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 255/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 407 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 466
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 467 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 526
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 527 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 582
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXXXXXXTYFE 442
G + +Q ++ L + D+ ++ +
Sbjct: 583 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNLN 636
Query: 443 EP--IRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
P R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 637 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 696
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 697 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 756
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 757 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 812
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+ILG + K F P L + + MG + S ++ +F+ C
Sbjct: 813 TETGNLFHIDFGHILG-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDVC 871
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 872 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 929
Query: 717 I 717
I
Sbjct: 930 I 930
>pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 255/541 (47%), Gaps = 48/541 (8%)
Query: 208 NAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQAL 267
N RK ++ I+ P L+ ++K+LLW FR+ + +A K SV+W + +
Sbjct: 411 NQLRKQLEAIIATDPLNPLTAEDKELLWHFRYESLKHPKAYPKLFSSVKWGQQEIVAKTY 470
Query: 268 ELMGRWEM-----IDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 322
+L+ R E+ +DV ++LL F E VRA AV LE +DD++ YLLQLVQA++
Sbjct: 471 QLLARREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQAVK 530
Query: 323 FERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTP 382
FE S L++FL++R N + FL W++ E H ++ ++ ILE +
Sbjct: 531 FEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAV--ILEAYLRGC-- 586
Query: 383 GVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXX--XXXXTY 440
G + +Q ++ L + D+ ++ + +
Sbjct: 587 ------GTAMLHDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNSQ 640
Query: 441 FEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTA-----SGGTCKMIFKKGDDI 495
E R P P + + + + S PL L F+ A S T +IFK GDD+
Sbjct: 641 LPESFRVPYDPGLKAGALAIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDL 700
Query: 496 RQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILS----- 549
RQD L++Q++ +M+ + + E+LDL L PY ++TG G++E + + ++A+I
Sbjct: 701 RQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN 760
Query: 550 ----EHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXX 605
+ + +L++ P E +E F+ SCAGY V T++LGIG
Sbjct: 761 TGAFKDEVLNHWLKEKSPTEEK----FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMI 816
Query: 606 XXXXXXFHVDFGYILGRDPKPF------PPPMKLCKEMVEAMGGA---ESQYYTRFKSYC 656
FH+DFG+I G + K F P L + + MG + S ++ +F+ C
Sbjct: 817 TETGNLFHIDFGHING-NYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDIC 875
Query: 657 CEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDL 716
+AY LR +NL++ LF +M + +P + S ++ I +++ + ++E +F D
Sbjct: 876 VKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKNEEDAKKYFLDQ 933
Query: 717 I 717
I
Sbjct: 934 I 934
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/533 (29%), Positives = 247/533 (46%), Gaps = 46/533 (8%)
Query: 214 IQRILKYPPTRTLSGDEKQLLWKFRFSLMSE-KRALTKFLRSVEWSDVQEAKQALELMGR 272
++ IL P L +E L+W R ++L K L S++W+ +++ Q L+
Sbjct: 560 LKEILDRDPLSQLCENEMDLIWTLRQDCRENFPQSLPKLLLSIKWNKLEDVAQLQALLQI 619
Query: 273 WEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFERSDKSRLS 332
W + +ALELL + + VR YAV L + D+EL YLLQLVQ L++E LS
Sbjct: 620 WPKLPPREALELLDFNYPDQYVREYAVGCLRQMSDEELSQYLLQLVQVLKYEPFLDCALS 679
Query: 333 QFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEES----MMKLTPGVDGED 388
+FL++R+ N + FL W++ E H P + +F E M L+ V+ +
Sbjct: 680 RFLLERALDNRRIGQFLFWHLRSEVHTPAVSVQFGVILEAYCRGSVGHMKVLSKQVEALN 739
Query: 389 GYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKXXXXXXXXXXXXTYFE--EPIR 446
K SL++ + + R G +T K Y E ++
Sbjct: 740 KLKTLNSLIKLNAV-----KLSRAKGKEAMHTCLK-------------QSAYREALSDLQ 781
Query: 447 SPLAPNILITGIVPSESSIFKSALHPLRLTFRTASGG--TCKMIFKKGDDIRQDQLVVQM 504
SPL P ++++ + + S + PL L + + + G + +IFK GDD+RQD L +QM
Sbjct: 782 SPLNPCVILSELYVEKCKYMDSKMKPLWLVYSSRAFGEDSVGVIFKNGDDLRQDMLTLQM 841
Query: 505 VSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPD 564
+ LMD L K LDL + PY LATG GL+E + + + + S ++ F+ D
Sbjct: 842 LRLMDLLWKEAGLDLRMLPYGCLATGDRSGLIEVVSTSETIADIQLNSSNVAATAAFNKD 901
Query: 565 -------EHGPFGITATCLETFIKSCAGYSVITYILGIGXXXXXXXXXXXXXXXFHVDFG 617
E+ +E F SCAGY V +Y+LGIG FH+DFG
Sbjct: 902 ALLNWLKEYNSGDDLDRAIEEFTLSCAGYCVASYVLGIGDRHSDNIMVKKTGQLFHIDFG 961
Query: 618 YILG---------RDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSN 668
+ILG R+ PF + + G ++ + RF+ C +AY ILR+ N
Sbjct: 962 HILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTG-NTEKFGRFRQCCEDAYLILRRHGN 1020
Query: 669 LILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESV 721
L + LF LM + +P++ S K I L++ L +E + F+ +E++
Sbjct: 1021 LFITLFALMLTAGLPELTS--VKDIQYLKDSLALGKSEEEALKQFKQKFDEAL 1071
>pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 1096
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 188/746 (25%), Positives = 318/746 (42%), Gaps = 114/746 (15%)
Query: 7 WNEPITLSTKYRDLTAHSQLALTVWDVSCGKDER-----LVGGTTILLFNSKMQLKTGKQ 61
WNE + DL ++L L++ V K + L G I LF+ L +GK
Sbjct: 411 WNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGN-INLFDYTDTLVSGKM 469
Query: 62 KLRLWPGKEADGSL--PTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLT-FK 118
L LWP L P G P E LE LE DW + F
Sbjct: 470 ALNLWPVPHGLEDLLNPIGVTGSNPNKETPCLE-LE-------------FDWFSSVVKFP 515
Query: 119 ALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFLLPAPITSTNELVIVWDPEV 178
+ I+E N+ V +++G ++
Sbjct: 516 DMSVIEEHANWS-------------------VSREAGFSY-----------------SHT 539
Query: 179 GKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFR 238
G N +LAR D +L+ ++ E+ ++ + P ++ EK LW R
Sbjct: 540 GLSN-------RLAR-------DNELRENDKEQ--LRALCTRDPLSEITEQEKDFLWSHR 583
Query: 239 FSLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYA 298
++ L K L SV+W+ E Q L+ W I A+ELL + VR++A
Sbjct: 584 HYCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRSFA 643
Query: 299 V-CILERADDDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEF 357
V C+ + DD+L YL+QLVQ L++E+ + L +FL++++ N + F W++ E
Sbjct: 644 VRCLEKYLTDDKLSQYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEM 703
Query: 358 HDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVR 417
H+ ++RF +L ES + G L + L RQ E +L ++ + +
Sbjct: 704 HNKTVSQRF----GLLLESYCRAC-------GMYL-KHLNRQVEAMEKLINLTDILKQEK 751
Query: 418 GNTQKKIEKXXXXXXXXXXXXTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTF 477
+ +K++ + SPL P + + E I SA PL L +
Sbjct: 752 KDETQKVQMKFLVEQMRQPDFMDALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNW 811
Query: 478 RTAS------GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQ 531
++IFK GDD+RQD L +Q++ +M+ + + + LDL + PY L+ G
Sbjct: 812 ENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGD 871
Query: 532 DEGLLEFI-PSRSLAQILSEH--RSIISY----LQKFHPDEHGPFGITATCLETFIKSCA 584
GL+E + S ++ QI + + + + L ++ D++ I ++ F +SCA
Sbjct: 872 CVGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNKG-EIYDAAIDLFTRSCA 930
Query: 585 GYSVITYILGIGXXXXXXXXXXXXXXXFHVDFGYILGRDPKPFP-----PPMKLCKEMVE 639
GY V T+ILGIG FH+DFG+ L K F P L ++ +
Sbjct: 931 GYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLI 990
Query: 640 AMGGAESQY-----YTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGIL 694
+ +Y + RF+ C +AY +R+ +NL +NLF +M GS +P++ S + I
Sbjct: 991 VISKGAQEYTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDD--IA 1048
Query: 695 KLQEKFRLDLDDEACVHFFQDLINES 720
+++ LD ++ + +F +N++
Sbjct: 1049 YIRKTLALDKTEQEALEYFTKQMNDA 1074
>pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha And The Drug Wortmannin
Length = 1091
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 191/746 (25%), Positives = 320/746 (42%), Gaps = 114/746 (15%)
Query: 7 WNEPITLSTKYRDLTAHSQLALTVWDVSCGKDER-----LVGGTTILLFNSKMQLKTGKQ 61
WNE + DL ++L L++ V K + L G I LF+ L +GK
Sbjct: 406 WNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGN-INLFDYTDTLVSGKM 464
Query: 62 KLRLWPGKEADGSL--PTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLT-FK 118
L LWP L P G P E LE LE DW + F
Sbjct: 465 ALNLWPVPHGLEDLLNPIGVTGSNPNKETPCLE-LE-------------FDWFSSVVKFP 510
Query: 119 ALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFLLPAPITSTNELVIVWDPEV 178
+ I+E N+ V +++G ++
Sbjct: 511 DMSVIEEHANWS-------------------VSREAGFSY-----------------SHA 534
Query: 179 GKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFR 238
G N +LAR D +L+ ++ E+ ++ I P ++ EK LW R
Sbjct: 535 GLSN-------RLAR-------DNELRENDKEQ--LKAISTRDPLSEITEQEKDFLWSHR 578
Query: 239 FSLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYA 298
++ L K L SV+W+ E Q L+ W I A+ELL + VR +A
Sbjct: 579 HYCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFA 638
Query: 299 V-CILERADDDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEF 357
V C+ + DD+L YL+QLVQ L++E+ + L +FL++++ N + F W++ E
Sbjct: 639 VRCLEKYLTDDKLSQYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEM 698
Query: 358 HDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVR 417
H+ ++RF +L ES + G L + L RQ E +L ++ + +
Sbjct: 699 HNKTVSQRF----GLLLESYCRAC-------GMYL-KHLNRQVEAMEKLINLTDILKQEK 746
Query: 418 GNTQKKIEKXXXXXXXXXXXXTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTF 477
+ +K++ + SPL P + + E I SA PL L +
Sbjct: 747 KDETQKVQMKFLVEQMRRPDFMDALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNW 806
Query: 478 RTAS------GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQ 531
++IFK GDD+RQD L +Q++ +M+ + + + LDL + PY L+ G
Sbjct: 807 ENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGD 866
Query: 532 DEGLLEFI-PSRSLAQILSEH--RSIISY----LQKFHPDEHGPFGITATCLETFIKSCA 584
GL+E + S ++ QI + + + + L ++ D++ I ++ F +SCA
Sbjct: 867 CVGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNKG-EIYDAAIDLFTRSCA 925
Query: 585 GYSVITYILGIGXXXXXXXXXXXXXXXFHVDFGYILGRDPKPFP-----PPMKLCKE--M 637
GY V T+ILGIG FH+DFG+ L K F P L ++ +
Sbjct: 926 GYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLI 985
Query: 638 VEAMGGAE---SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGIL 694
V + G E ++ + RF+ C +AY +R+ +NL +NLF +M GS +P++ S + I
Sbjct: 986 VISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDD--IA 1043
Query: 695 KLQEKFRLDLDDEACVHFFQDLINES 720
+++ LD ++ + +F +N++
Sbjct: 1044 YIRKTLALDKTEQEALEYFMKQMNDA 1069
>pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted
Covalent Inhibitor Of The Lipid Kinase Pi3kalpha
Length = 940
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 190/745 (25%), Positives = 320/745 (42%), Gaps = 112/745 (15%)
Query: 7 WNEPITLSTKYRDLTAHSQLALTVWDVSC---GKDERL-VGGTTILLFNSKMQLKTGKQK 62
WNE + DL ++L L++ V K+E + I LF+ L +GK
Sbjct: 277 WNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMA 336
Query: 63 LRLWPGKEADGSL--PTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLT-FKA 119
L LWP L P G P E LE LE DW + F
Sbjct: 337 LNLWPVPHGLEDLLNPIGVTGSNPNKETPCLE-LE-------------FDWFSSVVKFPD 382
Query: 120 LEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFLLPAPITSTNELVIVWDPEVG 179
+ I+E N+ V +++G ++ G
Sbjct: 383 MSVIEEHANWS-------------------VSREAGFSY-----------------SHAG 406
Query: 180 KINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRF 239
N +LAR D +L+ ++ E+ ++ I P ++ EK LW R
Sbjct: 407 LSN-------RLAR-------DNELRENDKEQ--LKAISTRDPLSEITEQEKDFLWSHRH 450
Query: 240 SLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAV 299
++ L K L SV+W+ E Q L+ W I A+ELL + VR +AV
Sbjct: 451 YCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAV 510
Query: 300 -CILERADDDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFH 358
C+ + DD+L YL+QLVQ L++E+ + L +FL++++ N + F W++ E H
Sbjct: 511 RCLEKYLTDDKLSQYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEMH 570
Query: 359 DPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRG 418
+ ++RF +L ES + G L + L RQ E +L ++ + +
Sbjct: 571 NKTVSQRF----GLLLESYCRAC-------GMYL-KHLNRQVEAMEKLINLTDILKQEKK 618
Query: 419 NTQKKIEKXXXXXXXXXXXXTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFR 478
+ +K++ + SPL P + + E I SA PL L +
Sbjct: 619 DETQKVQMKFLVEQMRRPDFMDALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWE 678
Query: 479 TAS------GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQD 532
++IFK GDD+RQD L +Q++ +M+ + + + LDL + PY L+ G
Sbjct: 679 NPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDC 738
Query: 533 EGLLEFI-PSRSLAQILSEH--RSIISY----LQKFHPDEHGPFGITATCLETFIKSCAG 585
GL+E + S ++ QI + + + + L ++ D++ I ++ F +SCAG
Sbjct: 739 VGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNKG-EIYDAAIDLFTRSCAG 797
Query: 586 YSVITYILGIGXXXXXXXXXXXXXXXFHVDFGYILGRDPKPFP-----PPMKLCKE--MV 638
Y V T+ILGIG FH+DFG+ L K F P L ++ +V
Sbjct: 798 YCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIV 857
Query: 639 EAMGGAE---SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILK 695
+ G E ++ + RF+ C +AY +R+ +NL +NLF +M GS +P++ S + I
Sbjct: 858 ISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDD--IAY 915
Query: 696 LQEKFRLDLDDEACVHFFQDLINES 720
+++ LD ++ + +F +N++
Sbjct: 916 IRKTLALDKTEQEALEYFMKQMNDA 940
>pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha
Length = 1096
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 191/746 (25%), Positives = 320/746 (42%), Gaps = 114/746 (15%)
Query: 7 WNEPITLSTKYRDLTAHSQLALTVWDVSCGKDER-----LVGGTTILLFNSKMQLKTGKQ 61
WNE + DL ++L L++ V K + L G I LF+ L +GK
Sbjct: 411 WNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGN-INLFDYTDTLVSGKM 469
Query: 62 KLRLWPGKEADGSL--PTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLT-FK 118
L LWP L P G P E LE LE DW + F
Sbjct: 470 ALNLWPVPHGLEDLLNPIGVTGSNPNKETPCLE-LE-------------FDWFSSVVKFP 515
Query: 119 ALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFLLPAPITSTNELVIVWDPEV 178
+ I+E N+ V +++G ++
Sbjct: 516 DMSVIEEHANWS-------------------VSREAGFSY-----------------SHA 539
Query: 179 GKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFR 238
G N +LAR D +L+ ++ E+ ++ I P ++ EK LW R
Sbjct: 540 GLSN-------RLAR-------DNELRENDKEQ--LKAISTRDPLSEITEQEKDFLWSHR 583
Query: 239 FSLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYA 298
++ L K L SV+W+ E Q L+ W I A+ELL + VR +A
Sbjct: 584 HYCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFA 643
Query: 299 V-CILERADDDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEF 357
V C+ + DD+L YL+QLVQ L++E+ + L +FL++++ N + F W++ E
Sbjct: 644 VRCLEKYLTDDKLSQYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEM 703
Query: 358 HDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVR 417
H+ ++RF +L ES + G L + L RQ E +L ++ + +
Sbjct: 704 HNKTVSQRF----GLLLESYCRAC-------GMYL-KHLNRQVEAMEKLINLTDILKQEK 751
Query: 418 GNTQKKIEKXXXXXXXXXXXXTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTF 477
+ +K++ + SPL P + + E I SA PL L +
Sbjct: 752 KDETQKVQMKFLVEQMRRPDFMDALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNW 811
Query: 478 RTAS------GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQ 531
++IFK GDD+RQD L +Q++ +M+ + + + LDL + PY L+ G
Sbjct: 812 ENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGD 871
Query: 532 DEGLLEFI-PSRSLAQILSEH--RSIISY----LQKFHPDEHGPFGITATCLETFIKSCA 584
GL+E + S ++ QI + + + + L ++ D++ I ++ F +SCA
Sbjct: 872 CVGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNKG-EIYDAAIDLFTRSCA 930
Query: 585 GYSVITYILGIGXXXXXXXXXXXXXXXFHVDFGYILGRDPKPFP-----PPMKLCKE--M 637
GY V T+ILGIG FH+DFG+ L K F P L ++ +
Sbjct: 931 GYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLI 990
Query: 638 VEAMGGAE---SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGIL 694
V + G E ++ + RF+ C +AY +R+ +NL +NLF +M GS +P++ S + I
Sbjct: 991 VISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDD--IA 1048
Query: 695 KLQEKFRLDLDDEACVHFFQDLINES 720
+++ LD ++ + +F +N++
Sbjct: 1049 YIRKTLALDKTEQEALEYFMKQMNDA 1074
>pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex
Length = 1096
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 190/749 (25%), Positives = 318/749 (42%), Gaps = 120/749 (16%)
Query: 7 WNEPITLSTKYRDLTAHSQLALTVWDVSC---GKDERL-VGGTTILLFNSKMQLKTGKQK 62
WNE + DL ++L L++ V K+E + I LF+ L +GK
Sbjct: 411 WNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMA 470
Query: 63 LRLWPGKEADGSL--PTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLT-FKA 119
L LWP L P G P E LE LE DW + F
Sbjct: 471 LNLWPVPHGLEDLLNPIGVTGSNPNKETPCLE-LE-------------FDWFSSVVKFPD 516
Query: 120 LEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFLLPAPITSTNELVIVWDPEVG 179
+ I+E N+ V +++G ++ G
Sbjct: 517 MSVIEEHANWS-------------------VSREAGFSY-----------------SHAG 540
Query: 180 KINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRF 239
N +LAR D +L+ ++ E+ ++ I P ++ EK LW R
Sbjct: 541 LSN-------RLAR-------DNELRENDKEQ--LKAISTRDPLSEITEQEKDFLWSHRH 584
Query: 240 SLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAV 299
++ L K L SV+W+ E Q L+ W I A+ELL + VR +AV
Sbjct: 585 YCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAV 644
Query: 300 -CILERADDDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFH 358
C+ + DD+L YL+QLVQ L++E+ + L +FL++++ N + F W++ E H
Sbjct: 645 RCLEKYLTDDKLSQYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEMH 704
Query: 359 DPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRG 418
+ ++RF +L ES + G L + L RQ E +L ++ + +
Sbjct: 705 NKTVSQRF----GLLLESYCRAC-------GMYL-KHLNRQVEAMEKLINLTDILKQEKK 752
Query: 419 NTQKKIEKXXXXXXXXXXXXTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFR 478
+ +K++ + SPL P + + E I SA PL L +
Sbjct: 753 DETQKVQMKFLVEQMRRPDFMDALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWE 812
Query: 479 TAS------GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQD 532
++IFK GDD+RQD L +Q++ +M+ + + + LDL + PY L+ G
Sbjct: 813 NPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDC 872
Query: 533 EGLLEFI-PSRSLAQILSE----------HRSIISYLQKFHPDEHGPFGITATCLETFIK 581
GL+E + S ++ QI + ++ +L+ + E I ++ F +
Sbjct: 873 VGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNKGE-----IYDAAIDLFTR 927
Query: 582 SCAGYSVITYILGIGXXXXXXXXXXXXXXXFHVDFGYILGRDPKPFP-----PPMKLCKE 636
SCAGY V T+ILGIG FH+DFG+ L K F P L ++
Sbjct: 928 SCAGYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQD 987
Query: 637 --MVEAMGGAE---SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEK 691
+V + G E ++ + RF+ C +AY +R+ +NL +NLF +M GS +P++ S +
Sbjct: 988 FLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDD- 1046
Query: 692 GILKLQEKFRLDLDDEACVHFFQDLINES 720
I +++ LD ++ + +F +N++
Sbjct: 1047 -IAYIRKTLALDKTEQEALEYFMKQMNDA 1074
>pdb|1K8I|B Chain B, Crystal Structure Of Mouse H2-Dm
Length = 191
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 145 LEHRVVFQDSGANFLLPAPITSTNELVIVWDPEVGKINPSE 185
+E V D+G ++ +L+ WDP+VGKI P E
Sbjct: 6 VESTCVLNDAGTPQDFTYCVSFNKDLLACWDPDVGKIVPCE 46
>pdb|3NIV|A Chain A, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|B Chain B, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|C Chain C, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|D Chain D, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
Length = 222
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 537 EFIPSRSL-AQILSEHRSIISYLQKFHPD 564
E +PS + QILS+ +II YL++ HP+
Sbjct: 54 ELVPSLDINGQILSQSXAIIDYLEEIHPE 82
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,250,841
Number of Sequences: 62578
Number of extensions: 844613
Number of successful extensions: 2262
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2108
Number of HSP's gapped (non-prelim): 67
length of query: 740
length of database: 14,973,337
effective HSP length: 106
effective length of query: 634
effective length of database: 8,340,069
effective search space: 5287603746
effective search space used: 5287603746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)