Query 004650
Match_columns 740
No_of_seqs 259 out of 1469
Neff 6.8
Searched_HMMs 29240
Date Tue Mar 26 18:23:06 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004650.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1948-1951//hhsearch_pdb/004650hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhm_A Phosphatidylinositol-4, 1.0 1 1 1213.0 50.4 649 4-738 403-1088(1091)
2 2y3a_A Phosphatidylinositol-4, 1.0 1 1 1203.7 54.1 646 1-740 397-1091(1092)
3 2wxf_A Phosphatidylinositol-4, 1.0 1 1 1187.2 55.9 639 1-740 261-939 (940)
4 1e7u_A Phosphatidylinositol 3- 1.0 1 1 1173.8 63.4 641 1-738 263-953 (961)
5 2x6h_A GH13170P, VPS34, phosph 1.0 1 1 1144.9 55.7 567 172-740 2-695 (696)
6 3ls8_A Phosphatidylinositol 3- 1.0 1 1 1143.9 51.5 546 186-733 3-614 (614)
7 3l4c_A Dedicator of cytokinesi 1.0 1 1 37.4 7.3 65 3-68 88-157 (220)
8 1djx_A PLC-D1, phosphoinositid 1.0 1 1 33.3 6.4 10 425-434 271-280 (624)
9 2dmh_A Myoferlin; beta-sandwic 1.0 1 1 31.8 5.3 50 3-52 49-98 (140)
10 1wfm_A Synaptotagmin XIII; C2 1.0 1 1 31.6 5.1 50 3-53 70-119 (138)
No 1
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=1.00 E-value=1 Score=1213.04 Aligned_cols=649 Identities=28% Similarity=0.463 Sum_probs=557.3
Q ss_pred CCCCCCCEEECCCCCCCCCCCCEEEEEEEECCC----CCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 864223178014547878347257899950699----8732365799972126762232334677305998999999899
Q 004650 4 MYCWNEPITLSTKYRDLTAHSQLALTVWDVSCG----KDERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLPTST 79 (740)
Q Consensus 4 ~~~Wnewi~FpI~~~dLPr~a~L~~ti~~~~~~----~~~~~iG~~~~~LFd~~~~Lr~G~~~L~lw~~~~~d~~~~~~~ 79 (740)
...|||||+|||+|+||||+|+|||+||++..+ ++..++||+|++|||+++.|++|.+.|++||.. |+...
T Consensus 403 ~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW~~~--~~~~~--- 477 (1091)
T 3hhm_A 403 NPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWPVP--HGLED--- 477 (1091)
T ss_dssp SCEEEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECEECC--TTCCC---
T ss_pred CCCCCEEEEECCCCCCCCHHCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCEEEEEECCC--CCHHH---
T ss_conf 9878701780673216983247999999722766766666446885235685578187477688860587--65444---
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCC
Q ss_conf 99999872146799999985531033466621356748999998976310489972799999388895048516987777
Q 004650 80 PGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFL 159 (740)
Q Consensus 80 p~~~~~~~~~e~~rle~l~~~~~~g~~~~~~wlD~~t~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~pVv~~~~~~~~~ 159 (740)
+++ +.|++.+++ ..+ .+.+.|+++.+++||+||+.+....
T Consensus 478 -----------------~~~--p~g~~~~np--------------------~~~-~~~~~l~~~~~~~~v~fp~~~~~~~ 517 (1091)
T 3hhm_A 478 -----------------LLN--PIGVTGSNP--------------------NKE-TPCLELEFDWFSSVVKFPDMSVIEE 517 (1091)
T ss_dssp -----------------SCC--TTSCCSCCS--------------------CSS-SCEEEEEECCCSSCEECCCHHHHHH
T ss_pred -----------------HCC--CCCCCCCCC--------------------CCC-CCCEEEEEECCCCCEEECCCCHHHH
T ss_conf -----------------237--544567899--------------------877-7627999974899868478413444
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHC--CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 8988767875213138777789910689999974202--58776789999577999988842899999998889999972
Q 004650 160 LPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLT--RGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKF 237 (740)
Q Consensus 160 ~~~~~~~~~~~~~~~d~e~~~~n~~e~k~~~l~rs~~--~~~~d~~lkp~~~~~~~L~~i~~~~p~~~L~~~ek~llW~~ 237 (740)
. .. ...|++.+..++ ++ ++..+++.||+.+++++|+.|+.+||++.|+++||++||+|
T Consensus 518 ~-------~~--~~~~~e~~~~~~-----------~~~l~~~~~~~~k~~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~ 577 (1091)
T 3hhm_A 518 H-------AN--WSVSREAGFSYS-----------HAGLSNRLARDNELRENDKEQLKAISTRDPLSEITEQEKDFLWSH 577 (1091)
T ss_dssp H-------HH--HHHHHHTTSCSC-----------CSSSCCC-------CCCGGGGGGTTSSSCTTSCCCHHHHHHHHHT
T ss_pred H-------HH--HCCCCCCCCCCC-----------CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 4-------43--214632133443-----------201134444444667578999999964799888999999999987
Q ss_pred HHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH-HCCCCHHHHHHHHH
Q ss_conf 57631060268654224569998879999998237789997567450499999987999999997-21992479998999
Q 004650 238 RFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCIL-ERADDDELQCYLLQ 316 (740)
Q Consensus 238 R~~l~~~p~aL~kfL~sV~W~~~~ev~~a~~lL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L-~~~~d~~L~~yL~Q 316 (740)
|+++.++|+||||||+||+|+++.+++|+++||..|++++|++|||||++.|+|+.||+|||++| ++++||+|++||||
T Consensus 578 R~~l~~~p~aL~k~L~sV~W~~~~e~~e~~~LL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~~ddeLl~YLlQ 657 (1091)
T 3hhm_A 578 RHYCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYLTDDKLSQYLIQ 657 (1091)
T ss_dssp HHHHTTSGGGHHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHTTSTTCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 88864081688898632788998999999999855788998899985766689989999999998754888999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 99986315676038999999980038024889988765432586034542789999999998419999987405889999
Q 004650 317 LVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSL 396 (740)
Q Consensus 317 LVQaLkyE~~~~s~L~~fLi~ra~~n~~i~~~l~W~L~~e~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l 396 (740)
||||||||++++|+|++|||+||++|++|||+|||+|++|++++....|| ..++++++.. |+ +.++.+
T Consensus 658 LVQALKyE~~~ds~La~FLl~RAl~n~~igh~lfW~L~~E~~~~~~~~r~----~~lLe~~~~~----~~----~~~~~l 725 (1091)
T 3hhm_A 658 LVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEMHNKTVSQRF----GLLLESYCRA----CG----MYLKHL 725 (1091)
T ss_dssp HHHGGGGCSSSSCHHHHHHHHHHTTCHHHHHHHHHHHHTTTTCTTTHHHH----HHHHHHHHHH----SC----THHHHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCHHHHHH----HHHHHHHHHH----CH----HHHHHH
T ss_conf 99997014335548999999998609788888877701102583078999----9999999851----89----999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCC-C-CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEE
Q ss_conf 999999999999988722688-8-82789999999997110035656788335899936899883286432056761289
Q 004650 397 VRQTELTAQLCSIMRDVGNVR-G-NTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLR 474 (740)
Q Consensus 397 ~~Q~~~~~~L~~i~~~ik~~~-~-~~~~k~~~l~~~L~~~~~~l~~~~~~~~lP~~p~~~i~~i~~~~~~v~~S~~~P~~ 474 (740)
.+|++|+++|.+++..+|..+ + ++.+|.+.|++.|++.. ....+ .++++|++|+++|.+|.+++|+||+|+++|++
T Consensus 726 ~rQ~~~~~~L~~is~~ik~~~~~~~~~~k~~~L~~~L~~~~-~~~~~-~~~~lPl~P~~~I~~i~~~~~~V~~S~~~P~~ 803 (1091)
T 3hhm_A 726 NRQVEAMEKLINLTDILKQEKKDETQKVQMKFLVEQMRRPD-FMDAL-QGFLSPLNPAHQLGNLRLEECRIMSSAKRPLW 803 (1091)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTCCSCHHHHHHHHHHHHHSHH-HHHHS-SSEEETTEEEEEECSBCGGGCEECCSSSCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC-HHHCC-CCCCCCCCCCEEEEEEEECEEEEEECCCCCEE
T ss_conf 99999999999999998631444336889999999983511-01024-67889999500898986154798621058179
Q ss_pred EEEEECC--CCCE----EEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEC-CCCHHHH
Q ss_conf 9999659--9902----3699847863256999999999999985159984112427998218966465536-7668999
Q 004650 475 LTFRTAS--GGTC----KMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQI 547 (740)
Q Consensus 475 l~f~~~d--g~~~----~~i~K~gDDlRqD~lvlQli~lm~~ll~~~~ldl~l~~Y~vip~~~~~GlIE~V~-~~tl~~I 547 (740)
|+|+|+| |+.| .+|||+|||||||++++|+|++||++|+++++|++++||+|+|||+++|+||||+ +.|+++|
T Consensus 804 L~f~g~D~~G~~y~~~~~~i~K~gDDLRQD~~v~Qli~lmn~il~~~~~dL~l~~Y~Vip~s~~~GlIE~V~ns~Tl~~I 883 (1091)
T 3hhm_A 804 LNWENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQI 883 (1091)
T ss_dssp EEECCCSTTSTTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCEEEEETTEEEEECCSSEEEHHHH
T ss_pred EEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEECCCCHHHHHH
T ss_conf 99954788876113443279974863318899999999999999857998067622699846987643453872509999
Q ss_pred HHHH----------HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEC
Q ss_conf 9732----------159999987699999997660889999998866899999876368989984237068988998702
Q 004650 548 LSEH----------RSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRLFHVDFG 617 (740)
Q Consensus 548 ~~~~----------~~l~~~l~~~~~~~~~~~~~~~~~~~~F~~S~A~ysv~tyiLgigDRH~dNIli~~~G~lfHIDFG 617 (740)
++++ +.+.+|+++.+++ .+| ..+++||++|||||||+||||||||||++||||+++|++||||||
T Consensus 884 ~~~~~~~~~~~f~~~~L~~~f~~~~~~--~~~---~~ar~nF~~S~A~ysvv~YiLgigDRH~~NILid~tG~v~HIDFG 958 (1091)
T 3hhm_A 884 QCKGGLKGALQFNSHTLHQWLKDKNKG--EIY---DAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKDDGQLFHIDFG 958 (1091)
T ss_dssp HHSCTTTCTTCCCTTHHHHHHHTTSCT--TSH---HHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEEEETTSCEEECCCC
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHCCCH--HHH---HHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEECCCCEEEEEEH
T ss_conf 986186510024746799999860876--899---999999999764242437887606888764699079998987025
Q ss_pred CCCCCCCCC-----CCCCCCCCHHHHHHHCC--CC---CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 223899888-----89985452999998289--76---512002089999999999718389999999970399998778
Q 004650 618 YILGRDPKP-----FPPPMKLCKEMVEAMGG--AE---SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIAS 687 (740)
Q Consensus 618 ~ilg~~~~~-----f~~PFrLT~~mv~~mgg--~~---s~~~~~F~~~c~~a~~~LR~~~~~i~~ll~lm~~~~ip~~~~ 687 (740)
++||++|++ +.+|||||++|+++||+ .+ ++.||.|+..|+.+|.+||+|++.|++++++|+++|+|||+.
T Consensus 959 ~~f~~~~~~~~~~~E~vPFrLT~~mv~vmg~G~~~~e~s~~fg~Fr~~c~~a~~~LR~~~~~il~LlelM~~s~lp~~~~ 1038 (1091)
T 3hhm_A 959 HFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQS 1038 (1091)
T ss_dssp CCSCC------------CCCCCHHHHHHSSCSSSCCSSSHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHGGGSCCTTCSS
T ss_pred HHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 45403876677776788843279999998257777655520778999999999999865678999999980699976576
Q ss_pred CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHH
Q ss_conf 9257899999970999999999999999999986-26357999999998741
Q 004650 688 DPEKGILKLQEKFRLDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQY 738 (740)
Q Consensus 688 ~~~~~i~~l~~~l~l~~s~~~a~~~~~~lI~~s~-~~~~t~~~~~~h~~a~~ 738 (740)
.+ ++.++++||++++||++|.++|.++|++|+ +++.|++++++|++||.
T Consensus 1039 ~~--~i~~lr~rf~l~lseeeA~~~f~~~i~~s~~~~~~t~~n~~~H~~a~~ 1088 (1091)
T 3hhm_A 1039 FD--DIAYIRKTLALDKTEQEALEYFMKQMNDARHGGWTTKMDWIFHTIKQH 1088 (1091)
T ss_dssp HH--HHHHHHHHSCCSSCHHHHHHHHHHHHHHCCCCCCCSSSCSSSCCC---
T ss_pred HH--HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCC
T ss_conf 57--999999974899899999999999999998538624335789986023
No 2
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=1.00 E-value=1 Score=1203.66 Aligned_cols=646 Identities=28% Similarity=0.465 Sum_probs=571.5
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEC----CC------------------CCCEEEEEEEEEEECCCCCCCC
Q ss_conf 9998642231780145478783472578999506----99------------------8732365799972126762232
Q 004650 1 MGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVS----CG------------------KDERLVGGTTILLFNSKMQLKT 58 (740)
Q Consensus 1 ~~~~~~Wnewi~FpI~~~dLPr~a~L~~ti~~~~----~~------------------~~~~~iG~~~~~LFd~~~~Lr~ 58 (740)
|++++.|||||+|||+|+||||+|+|||+||++. ++ +...++||+|++|||+++.|++
T Consensus 397 ~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~ 476 (1092)
T 2y3a_A 397 GKNDHIWNEQLEFDINICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRS 476 (1092)
T ss_dssp SSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC------------------------------CCEEEEESBCTTCBBCC
T ss_pred CCCCCCCCEEEEECCCCCCCCHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
T ss_conf 77887466069917702069941079999998447556665443344322110112446553267885523887582207
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 33467730599899999989999999872146799999985531033466621356748999998976310489972799
Q 004650 59 GKQKLRLWPGKEADGSLPTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYL 138 (740)
Q Consensus 59 G~~~L~lw~~~~~d~~~~~~~p~~~~~~~~~e~~rle~l~~~~~~g~~~~~~wlD~~t~~~i~~~~~~~~~~~~~~~~~L 138 (740)
|.+.|++||..++ +.....+|+ |.+.. +++.++++.|
T Consensus 477 G~~~l~lw~~~~~-~~~~~~~p~----------------------g~~~~--------------------~~~~~~~~~L 513 (1092)
T 2y3a_A 477 GDVILHSWSSFPD-ELEEMLNPM----------------------GTVQT--------------------NPYAENATAL 513 (1092)
T ss_dssp EEEECCCCTTCCC-SCCSSSCCS----------------------SCSSC--------------------CSCCTTSCCC
T ss_pred CCEEEEEEECCCC-CCCCCCCCC----------------------CCCCC--------------------CCCCCCCEEE
T ss_conf 7868997657765-655557888----------------------65578--------------------9897874699
Q ss_pred EEEECCCCC-EEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999388895-0485169877778988767875213138777789910689999974202587767899995779999888
Q 004650 139 VVDFGRLEH-RVVFQDSGANFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRI 217 (740)
Q Consensus 139 ~iefp~f~~-pVv~~~~~~~~~~~~~~~~~~~~~~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i 217 (740)
.|+||.|++ ||+|++. +++|.|++++.++ +..++++||+++++++|+.|
T Consensus 514 ~ief~~~~~~~V~~~~~---------------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~~i 563 (1092)
T 2y3a_A 514 HITFPENKKQPCYYPPF---------------------------DKIIEKAAELASG---DSANVSSRGGKKFLAVLKEI 563 (1092)
T ss_dssp EEEECCCSSSCCBCCCT---------------------------THHHHHHHHHC--------------CTTHHHHHHTT
T ss_pred EEEECCCCCCEEEECCC---------------------------CHHHHHHHHHCCC---CCCCCCCCCCHHHHHHHHHH
T ss_conf 99955568970880694---------------------------0566667775027---76533348998999999999
Q ss_pred HCCCCCCCCCHHHHHHHHHHHHHHHH-CCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHH
Q ss_conf 42899999998889999972576310-60268654224569998879999998237789997567450499999987999
Q 004650 218 LKYPPTRTLSGDEKQLLWKFRFSLMS-EKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRA 296 (740)
Q Consensus 218 ~~~~p~~~L~~~ek~llW~~R~~l~~-~p~aL~kfL~sV~W~~~~ev~~a~~lL~~W~~i~~~~ALeLL~~~f~d~~VR~ 296 (740)
+.+||++.|+++||++||++|+||.+ .|+||||||+||+|+++.++.|+++||..|++++|++|||||++.|+|+.||+
T Consensus 564 ~~~~p~~~L~~~ek~llW~~R~~~~~~~p~aL~k~l~sv~w~~~~e~~e~~~lL~~W~~i~p~~ALeLL~~~f~d~~VR~ 643 (1092)
T 2y3a_A 564 LDRDPLSQLCENEMDLIWTLRQDCRENFPQSLPKLLLSIKWNKLEDVAQLQALLQIWPKLPPREALELLDFNYPDQYVRE 643 (1092)
T ss_dssp TTSCTTSCCCHHHHHHHHHTHHHHHHHCGGGHHHHHHHSCTTCHHHHHHHHHHHHTSCCCCHHHHGGGGSTTCCCTTHHH
T ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHH
T ss_conf 84478778999999999971999875680788999841688998899999999705899999999986686589989999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999721992479998999999863156760389999999800380248899887654325860345427899999999
Q 004650 297 YAVCILERADDDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEES 376 (740)
Q Consensus 297 yAV~~L~~~~d~~L~~yL~QLVQaLkyE~~~~s~L~~fLi~ra~~n~~i~~~l~W~L~~e~~~~~~~~~~~~~~~~l~~~ 376 (740)
|||++|++++|++|++||||||||||||++++|+|++|||+||++|++|||+|||+|++|++++....|| ..++++
T Consensus 644 yAV~~L~~~~d~~l~~yLpQLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~L~~e~~~~~~~~r~----~~lle~ 719 (1092)
T 2y3a_A 644 YAVGCLRQMSDEELSQYLLQLVQVLKYEPFLDCALSRFLLERALDNRRIGQFLFWHLRSEVHTPAVSVQF----GVILEA 719 (1092)
T ss_dssp HHHHHHHSSCHHHHHHHHHHHHHHHHHCSSSSCHHHHHHHHHHTSCSSHHHHHHHHHHHHHTSHHHHHHH----HHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCHHHHHH----HHHHHH
T ss_conf 9999997399999999999999998606556567999999998648577899997712220691589999----999999
Q ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 9841999998740588999999999999999998872268--88827899999999971100356567883358999368
Q 004650 377 MMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNV--RGNTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNIL 454 (740)
Q Consensus 377 ~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~--~~~~~~k~~~l~~~L~~~~~~l~~~~~~~~lP~~p~~~ 454 (740)
++... + ..++.+.+|++|+++|.+|+..+|.. ++.++++.+.|++.|++.. ....+ .++++|++|.+.
T Consensus 720 ~~~~~----~----~~~~~l~~Q~~~~~~L~~is~~ik~~~~~~~r~k~~e~L~~~l~~~~-~~~~~-~~~~lP~~P~v~ 789 (1092)
T 2y3a_A 720 YCRGS----V----GHMKVLSKQVEALNKLKTLNSLIKLNAVKLSRAKGKEAMHTCLKQSA-YREAL-SDLQSPLNPCVI 789 (1092)
T ss_dssp HHHHT----T----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHSTT-HHHHT-SSSCCSSCSSBC
T ss_pred HHHHC----H----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-HHHCC-CCCCCCCCCCEE
T ss_conf 98426----7----88999999999999999999998524654437889999999860421-12137-898789997547
Q ss_pred EEEEECCCCEEECCCCCEEEEEEEECC--CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
Q ss_conf 998832864320567612899999659--990236998478632569999999999999851599841124279982189
Q 004650 455 ITGIVPSESSIFKSALHPLRLTFRTAS--GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQD 532 (740)
Q Consensus 455 i~~i~~~~~~v~~S~~~P~~l~f~~~d--g~~~~~i~K~gDDlRqD~lvlQli~lm~~ll~~~~ldl~l~~Y~vip~~~~ 532 (740)
|.+|.+++|+||+|+++|++|+|+|+| |+.|++|||+|||||||++++|++++||.+|+++++||+++||+|+|+|++
T Consensus 790 I~~~~~~~~~V~~S~~~P~rL~~~gsD~~G~~y~~L~K~gDDLRQD~rv~Ql~~lmn~ll~~~~~~L~i~~Y~Vipls~~ 869 (1092)
T 2y3a_A 790 LSELYVEKCKYMDSKMKPLWLVYSSRAFGEDSVGVIFKNGDDLRQDMLTLQMLRLMDLLWKEAGLDLRMLPYGCLATGDR 869 (1092)
T ss_dssp CCCCCGGGCEECSSTTCCEEEEEECTTTSSSEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCEECCSSS
T ss_pred EEEEECCCEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCC
T ss_conf 88884472388031128569999933778861457984483211248999999999999984898818863348984598
Q ss_pred CCEEEEEC-CCCHHHHHHHH-----------HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 66465536-76689999732-----------1599999876999999976608899999988668999998763689899
Q 004650 533 EGLLEFIP-SRSLAQILSEH-----------RSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRHL 600 (740)
Q Consensus 533 ~GlIE~V~-~~tl~~I~~~~-----------~~l~~~l~~~~~~~~~~~~~~~~~~~~F~~S~A~ysv~tyiLgigDRH~ 600 (740)
+|+||||+ +.|+++|+++. ..+.+|+.+.+++ .+ +..+++||++|||+|||+||||||||||+
T Consensus 870 ~GLIE~V~ns~TL~~I~~~~~~~~~~~~f~~~~L~~~~~~~~~~--~~---~~~ar~nF~~SlA~ySvv~YILGlGDRH~ 944 (1092)
T 2y3a_A 870 SGLIEVVSTSETIADIQLNSSNVAATAAFNKDALLNWLKEYNSG--DD---LDRAIEEFTLSCAGYCVASYVLGIGDRHS 944 (1092)
T ss_dssp CCEEECCTTCCBHHHHHSSSCTTTTTSCSSTTHHHHHHHHHCCT--HH---HHHHHHHHHHHHHHHHHHHHHTTCCCCCT
T ss_pred CCEEEECCCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCH--HH---HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 88575579974599999863562022104846799999976988--88---99999999999999999999811778997
Q ss_pred CCEEEECCCCEEEEEECCCCCCCCC-----CCCCCCCCCHHHHHHHC-C--CCCCCCCCHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 8423706898899870222389988-----88998545299999828-9--76512002089999999999718389999
Q 004650 601 DNLLLRDDGRLFHVDFGYILGRDPK-----PFPPPMKLCKEMVEAMG-G--AESQYYTRFKSYCCEAYNILRKSSNLILN 672 (740)
Q Consensus 601 dNIli~~~G~lfHIDFG~ilg~~~~-----~f~~PFrLT~~mv~~mg-g--~~s~~~~~F~~~c~~a~~~LR~~~~~i~~ 672 (740)
+||||+++|++||||||++||+.++ |+.||||||++|+++|| | ..++.||.|+..|+.+|.+||+|++.|++
T Consensus 945 ~NILid~tG~v~HIDFG~~f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~~fg~Fr~~c~~a~~~LR~~~~~Il~ 1024 (1092)
T 2y3a_A 945 DNIMVKKTGQLFHIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQCCEDAYLILRRHGNLFIT 1024 (1092)
T ss_dssp TTEEECTTSCEEECCCSCCSSCCCCGGGCCCCCCCCCCCHHHHHHHHTTCSSCSSSTTHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CCEEEECCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 63789357878998423344037766888888898047799999970687777754225999999999999868899999
Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHCC
Q ss_conf 9999703999987789257899999970999999999999999999986-2635799999999874109
Q 004650 673 LFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQYWR 740 (740)
Q Consensus 673 ll~lm~~~~ip~~~~~~~~~i~~l~~~l~l~~s~~~a~~~~~~lI~~s~-~~~~t~~~~~~h~~a~~~r 740 (740)
++++|+++++|||+..+ ++.++++||++++||++|.++|.++|++|+ +++.|++++++|++||+-|
T Consensus 1025 ll~lml~~~Lp~~~~~~--~i~~lr~rf~l~~seeeA~~~~~~~I~~s~~~~~~t~~n~~~H~~~~~~~ 1091 (1092)
T 2y3a_A 1025 LFALMLTAGLPELTSVK--DIQYLKDSLALGKSEEEALKQFKQKFDEALRESWTTKVNWMAHTVRKDYR 1091 (1092)
T ss_dssp HHHHTSTTCCSSCSSHH--HHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHSCC------
T ss_pred HHHHHHCCCCCCCCCHH--HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCC
T ss_conf 99999479995335365--79999986189999999999999999998743730013678898605578
No 3
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=1.00 E-value=1 Score=1187.22 Aligned_cols=639 Identities=29% Similarity=0.488 Sum_probs=559.7
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCC--C----------CCEEEEEEEEEEECCCCCCCCCCEEEEEECC
Q ss_conf 999864223178014547878347257899950699--8----------7323657999721267622323346773059
Q 004650 1 MGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCG--K----------DERLVGGTTILLFNSKMQLKTGKQKLRLWPG 68 (740)
Q Consensus 1 ~~~~~~Wnewi~FpI~~~dLPr~a~L~~ti~~~~~~--~----------~~~~iG~~~~~LFd~~~~Lr~G~~~L~lw~~ 68 (740)
|.+++.|||||+|||+|+||||+|+|||+||++..+ + +..++||+|++|||+++.|++|.+.|++||.
T Consensus 261 ~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~~ 340 (940)
T 2wxf_A 261 VCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMWPS 340 (940)
T ss_dssp SCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECEEC
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEC
T ss_conf 77776444179816613159813579999997047766753212245566513788856578875721067779998417
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC-
Q ss_conf 9899999989999999872146799999985531033466621356748999998976310489972799999388895-
Q 004650 69 KEADGSLPTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEH- 147 (740)
Q Consensus 69 ~~~d~~~~~~~p~~~~~~~~~e~~rle~l~~~~~~g~~~~~~wlD~~t~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~- 147 (740)
.++ +.....+|+ |.+.+ +++.+.++.|.|+||.|+.
T Consensus 341 ~~~-~~~~~~~p~----------------------g~~~~--------------------~~~~~~~~~L~ief~~~~~~ 377 (940)
T 2wxf_A 341 VPD-EKGELLNPA----------------------GTVRG--------------------NPNTESAAALVIYLPEVAPH 377 (940)
T ss_dssp C-------CCCTT----------------------SCSSC--------------------CSCTTTSCEEEEEECCCCC-
T ss_pred CCC-CCCCCCCCC----------------------CCCCC--------------------CCCCCCCEEEEEEECCCCCC
T ss_conf 765-654457888----------------------65578--------------------98877765999996456898
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 04851698777789887678752131387777899106899999742025877678999957799998884289999999
Q 004650 148 RVVFQDSGANFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLS 227 (740)
Q Consensus 148 pVv~~~~~~~~~~~~~~~~~~~~~~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~L~ 227 (740)
||+|++.+. ..+++.+.++++++ ++++++|+.|+.+||++.|+
T Consensus 378 pV~~~~~~~----------------------~~~~~~~~~~~~l~---------------~~~~~~l~~i~~~~p~~~L~ 420 (940)
T 2wxf_A 378 PVYFPALEK----------------------ILELGRHGERGRIT---------------EEEQLQLREILERRGSGELY 420 (940)
T ss_dssp -CBCCCHHH----------------------HHHC-------------------------------CHHHHCC----CCC
T ss_pred CEECCCCCH----------------------HHHCCCCCCCCCCC---------------HHHHHHHHHHHCCCCCCCCC
T ss_conf 578578432----------------------22063324665689---------------89999999997059854599
Q ss_pred HHHHHHHHHHHHHHHH-CCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 8889999972576310-602686542245699988799999982377899975674504999999879999999972199
Q 004650 228 GDEKQLLWKFRFSLMS-EKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERAD 306 (740)
Q Consensus 228 ~~ek~llW~~R~~l~~-~p~aL~kfL~sV~W~~~~ev~~a~~lL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~ 306 (740)
++||++||++|+||.+ .|+||||||+||+|+++.++.|+++||..|++++|++|||||++.|+|+.||+|||++|++++
T Consensus 421 ~~ek~llW~~R~~~~~~~p~aL~~~l~sv~w~~~~~~~~~~~ll~~W~~~~~~~ALeLL~~~f~d~~Vr~yAv~~L~~~~ 500 (940)
T 2wxf_A 421 EHEKDLVWKMRHEVQEHFPEALARLLLVTKWNKHEDVAQMLYLLCSWPELPVLSALELLDFSFPDCYVGSFAIKSLRKLT 500 (940)
T ss_dssp HHHHHHHHHTHHHHHHHCGGGHHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHHTSTTCCCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 89999999879998755816888988014789989999999997057899999999865875899899999999987299
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 24799989999998631567603899999998003802488998876543258603454278999999999841999998
Q 004650 307 DDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDG 386 (740)
Q Consensus 307 d~~L~~yL~QLVQaLkyE~~~~s~L~~fLi~ra~~n~~i~~~l~W~L~~e~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 386 (740)
|++|++||||||||||||++++|+|++|||+||++|++|||+|||+|++|++++....| +..++++++.. ++
T Consensus 501 d~~l~~yL~QLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~~~~r----~~~ile~~~~~----~~ 572 (940)
T 2wxf_A 501 DDELFQYLLQLVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALR----FGLIMEAYCRG----ST 572 (940)
T ss_dssp HHHHHHHHHHHHHHGGGCSSSSCHHHHHHHHHHHHCHHHHHHHHHHHHTTTTCHHHHHH----HHHHHHHHHHH----CH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCHHHHH----HHHHHHHHHHH----CH
T ss_conf 89999999999999860544655899999999875757789999883103169069999----99999999842----67
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCE
Q ss_conf 740588999999999999999998872268--888278999999999711003565678833589993689988328643
Q 004650 387 EDGYKLWQSLVRQTELTAQLCSIMRDVGNV--RGNTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESS 464 (740)
Q Consensus 387 ~~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~--~~~~~~k~~~l~~~L~~~~~~l~~~~~~~~lP~~p~~~i~~i~~~~~~ 464 (740)
..++.+.+|++|+++|.+|+..+|.. ++.++++.+.|++.|++.. ....+ .++++|++|.+.|.+|.+++|+
T Consensus 573 ----~~~~~l~~q~~~~~~L~~i~~~ik~~~~~~~r~k~~~~L~~~l~~~~-~~~~~-~~~~lP~~P~~~I~~~~~~~~~ 646 (940)
T 2wxf_A 573 ----HHMKVLMKQGEALSKLKALNDFVKVSSQKTTKPQTKEMMHMCMRQET-YMEAL-SHLQSPLDPSTLLEEVCVEQCT 646 (940)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHTSHH-HHHHH-SSEEETTEEEEEECEECGGGCE
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-HHHCC-CCCCCCCCCCEEEEEECCCCEE
T ss_conf ----88999999999999999999998524653317899999999871411-23306-8987899986257776067148
Q ss_pred EECCCCCEEEEEEEECC---CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEC-
Q ss_conf 20567612899999659---99023699847863256999999999999985159984112427998218966465536-
Q 004650 465 IFKSALHPLRLTFRTAS---GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP- 540 (740)
Q Consensus 465 v~~S~~~P~~l~f~~~d---g~~~~~i~K~gDDlRqD~lvlQli~lm~~ll~~~~ldl~l~~Y~vip~~~~~GlIE~V~- 540 (740)
||+|+++|++|+|+|+| |+.|++|||+|||||||++++|++++||.+|+++++||+++||+|+|+|+++|+||||+
T Consensus 647 V~~S~~~P~~l~~~gsD~~~G~~~~~i~K~gDDLRqD~rv~Ql~~lmn~il~~~~~~L~i~~Y~Vipls~~~GlIE~V~n 726 (940)
T 2wxf_A 647 FMDSKMKPLWIMYSSEEAGSAGNVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLH 726 (940)
T ss_dssp ECSSTTCCEEEEEECTTTGGGGCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEETTEEEEECCSS
T ss_pred ECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEECCC
T ss_conf 83311287499998347677863237983375433128999999999999983899718995149982377886867799
Q ss_pred CCCHHHHHHH-----------HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
Q ss_conf 7668999973-----------21599999876999999976608899999988668999998763689899842370689
Q 004650 541 SRSLAQILSE-----------HRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDG 609 (740)
Q Consensus 541 ~~tl~~I~~~-----------~~~l~~~l~~~~~~~~~~~~~~~~~~~~F~~S~A~ysv~tyiLgigDRH~dNIli~~~G 609 (740)
+.|+++|+++ ...+.+|+.+.+++ .+ +..+++||++|||+|||+||||||||||++||||+++|
T Consensus 727 s~tl~~I~~~~~~~~~~~~f~~~~l~~~~~~~~~~--~~---~~~a~~~F~~S~A~~Svv~YILGlgDRH~~NILid~tG 801 (940)
T 2wxf_A 727 SDTIANIQLNKSNMAATAAFNKDALLNWLKSKNPG--EA---LDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESG 801 (940)
T ss_dssp EEEHHHHHTCCSSSTTCCSSGGGHHHHHHHHHSCT--TH---HHHHHHHHHHHHHHHHHHHHHHTCCCCCGGGEEEETTS
T ss_pred CCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCH--HH---HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
T ss_conf 73699999861663022025855699999975988--88---99999999998899999999800678984437995588
Q ss_pred CEEEEEECCCCCCCCC-----CCCCCCCCCHHHHHHHCC---CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC
Q ss_conf 8899870222389988-----889985452999998289---76512002089999999999718389999999970399
Q 004650 610 RLFHVDFGYILGRDPK-----PFPPPMKLCKEMVEAMGG---AESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSN 681 (740)
Q Consensus 610 ~lfHIDFG~ilg~~~~-----~f~~PFrLT~~mv~~mgg---~~s~~~~~F~~~c~~a~~~LR~~~~~i~~ll~lm~~~~ 681 (740)
++||||||++||+.++ |+.||||||++|+++||+ ..++.||.|+..|+.+|.+||+|++.|++++++|++++
T Consensus 802 ~v~HIDFG~~f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~~~g~Fr~~c~~~~~~LR~~~~~ll~ll~lml~~~ 881 (940)
T 2wxf_A 802 QLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFLHLFALMRAAG 881 (940)
T ss_dssp CEEECCCCCCTTCC---------CCCCCCCHHHHHHHTTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHGGGC
T ss_pred CEEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 78988413333045665688888898147799999970787777743456999999999999867899999999995799
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHCC
Q ss_conf 9987789257899999970999999999999999999986-2635799999999874109
Q 004650 682 IPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQYWR 740 (740)
Q Consensus 682 ip~~~~~~~~~i~~l~~~l~l~~s~~~a~~~~~~lI~~s~-~~~~t~~~~~~h~~a~~~r 740 (740)
+|||+..+ ++.+++++|++++||++|.++|.++|++|+ +++.|++++++|++||+-|
T Consensus 882 lp~~~~~~--~i~~l~~r~~l~~se~ea~~~~~~~i~~s~~~~~~t~~n~~~H~~~~~~~ 939 (940)
T 2wxf_A 882 LPELSCSK--DIQYLKDSLALGKTEEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDNR 939 (940)
T ss_dssp CTTSCSHH--HHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHCC----------------
T ss_pred CCCCCCHH--HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCC
T ss_conf 95457667--99999997189989999999999999999734721112678898605568
No 4
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=1.00 E-value=1 Score=1173.79 Aligned_cols=641 Identities=28% Similarity=0.497 Sum_probs=558.5
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCC----------------CCEEEEEEEEEEECCCCCCCCCCEEEE
Q ss_conf 9998642231780145478783472578999506998----------------732365799972126762232334677
Q 004650 1 MGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGK----------------DERLVGGTTILLFNSKMQLKTGKQKLR 64 (740)
Q Consensus 1 ~~~~~~Wnewi~FpI~~~dLPr~a~L~~ti~~~~~~~----------------~~~~iG~~~~~LFd~~~~Lr~G~~~L~ 64 (740)
|++++.|||||+|||+|+||||+|+|||+||++..++ +..++||+|++|||+++.|++|.+.|+
T Consensus 263 ~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~l~~G~~~L~ 342 (961)
T 1e7u_A 263 FTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFLLRHGEYVLH 342 (961)
T ss_dssp CCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------CEEEEEEEESBCTTSBBCCEEEEEE
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEE
T ss_conf 67776556047706502059801379999995046755555654443322346631578884666547882225788998
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf 30599899999989999999872146799999985531033466621356748999998976310489972799999388
Q 004650 65 LWPGKEADGSLPTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGR 144 (740)
Q Consensus 65 lw~~~~~d~~~~~~~p~~~~~~~~~e~~rle~l~~~~~~g~~~~~~wlD~~t~~~i~~~~~~~~~~~~~~~~~L~iefp~ 144 (740)
+||..++++....-.+. .|...+ ++..++++.|.|+||.
T Consensus 343 lw~~~~~~~~~~~~~~~---------------------~~~~~~--------------------~p~~~~~~~l~ie~~~ 381 (961)
T 1e7u_A 343 MWQLSGKGEDQGSFNAD---------------------KLTSAT--------------------NPDKENSMSISILLDN 381 (961)
T ss_dssp CEECCSCC-----CCGG---------------------GGCCCC--------------------CSCTTTSCEEEEEECC
T ss_pred EEECCCCCCCCCCCCCC---------------------CCCCCC--------------------CCCCCCCEEEEEEECC
T ss_conf 75476554533433555---------------------676768--------------------9887777489999647
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 89504851698777789887678752131387777899106899999742025877678999957799998884289999
Q 004650 145 LEHRVVFQDSGANFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTR 224 (740)
Q Consensus 145 f~~pVv~~~~~~~~~~~~~~~~~~~~~~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~ 224 (740)
|++||+||+.+ ...|++.. ..+++++++++++|+.|+.+||++
T Consensus 382 ~~~~v~~p~~~----------------~~~~~~~~---------------------~~~~~~~~~~~~~l~~i~~~~p~~ 424 (961)
T 1e7u_A 382 YCHPIALPKHR----------------PTPDPEGD---------------------RVRAEMPNQLRKQLEAIIATDPLN 424 (961)
T ss_dssp SSCBBCCCCCC----------------CC-----C---------------------CCCCCCCHHHHHHHHHHHTSCTTS
T ss_pred CCCCEEECCCC----------------CCCCCCCC---------------------CCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 88865636765----------------55661113---------------------455678989999999997157667
Q ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCC---C--CCCCHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 999888999997257631060268654224569998879999998237---7--89997567450499999987999999
Q 004650 225 TLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGR---W--EMIDVCDALELLSPVFESEEVRAYAV 299 (740)
Q Consensus 225 ~L~~~ek~llW~~R~~l~~~p~aL~kfL~sV~W~~~~ev~~a~~lL~~---W--~~i~~~~ALeLL~~~f~d~~VR~yAV 299 (740)
.|+++||++||+||+||.++|+||||||+||+|++++++.||+.||.. | ++++|++|||||++.|+|+.||+|||
T Consensus 425 ~L~~~ek~llW~~R~~~~~~p~aL~k~l~sv~w~~~~~v~e~~~lL~~~~~W~~~~~~~~~ALeLL~~~f~d~~VR~yAV 504 (961)
T 1e7u_A 425 PLTAEDKELLWHFRYESLKDPKAYPKLFSSVKWGQQEIVAKTYQLLAKREVWDQSALDVGLTMQLLDCNFSDENVRAIAV 504 (961)
T ss_dssp CCCHHHHHHHHHTHHHHTTCGGGHHHHHTSSCTTCHHHHHHHHHHHHCCHHHHHSCCCHHHHHHTTSTTCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 89999999999879987338478878754567899899999999873367777889899999985687689978999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHH
Q ss_conf 99721992479998999999863156760389999999800380248899887654325-86034542789999999998
Q 004650 300 CILERADDDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFH-DPVHAKRFYSTHEILEESMM 378 (740)
Q Consensus 300 ~~L~~~~d~~L~~yL~QLVQaLkyE~~~~s~L~~fLi~ra~~n~~i~~~l~W~L~~e~~-~~~~~~~~~~~~~~l~~~~~ 378 (740)
++|++++|++|++||||||||||||++++|+|++|||+||++|++|||+|||+|++|++ ++.+..| +..+++.++
T Consensus 505 ~~L~~~~d~~l~~YL~QLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~~~~~r----~~~ll~~~l 580 (961)
T 1e7u_A 505 QKLESLEDDDVLHYLLQLVQAVKFEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQR----FAVILEAYL 580 (961)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHGGGCSSSSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCTTTHHH----HHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH----HHHHHHHHH
T ss_conf 9998299999999999999998533346776999999998618377899998855231578668999----999999998
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 41999998740588999999999999999998872268888----27899999999971100356567883358999368
Q 004650 379 KLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGN----TQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNIL 454 (740)
Q Consensus 379 ~~l~~~~~~~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~~~~----~~~k~~~l~~~L~~~~~~l~~~~~~~~lP~~p~~~ 454 (740)
. + + +..+++.+.+|++++++|.+++..+|..+.. ..++.+.+++.|++. ... +++..+.+|++|+++
T Consensus 581 ~---~-~---~~~~~~~~~~q~~~~~~L~~i~~~ik~~~~~~~~~~~~~~~~l~~~L~~l-~~i-~vP~~~~lP~dP~v~ 651 (961)
T 1e7u_A 581 R---G-C---GTAMLHDFTQQVQVIDMLQKVTIDIKSLSAEKYDVSSQVISQLKQKLENL-QNL-NLPQSFRVPYDPGLK 651 (961)
T ss_dssp T---T-S---CHHHHHHHHHHHHHHHHHHHHHHHSGGGGCCSSCCCHHHHHHHHHHHHHH-HHT-TSCSCEEETTEEEEE
T ss_pred H---H-C---CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH-HCC-CCCCCCCCCCCCCEE
T ss_conf 6---4-4---29899999999999999999999987640000231166799999999864-207-589876579999548
Q ss_pred EEEEECCCCEEECCCCCEEEEEEEECCCC-----CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf 99883286432056761289999965999-----0236998478632569999999999999851599841124279982
Q 004650 455 ITGIVPSESSIFKSALHPLRLTFRTASGG-----TCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLAT 529 (740)
Q Consensus 455 i~~i~~~~~~v~~S~~~P~~l~f~~~dg~-----~~~~i~K~gDDlRqD~lvlQli~lm~~ll~~~~ldl~l~~Y~vip~ 529 (740)
|.+|.+++|+||+|+++|++|+|+|+||. .|++|||+|||||||++++|++++||.+|+++++||+++||+|+|+
T Consensus 652 i~~i~~~~~~V~~S~~~P~~l~~~g~Dg~~~~~~~~~~i~K~gDDLRQD~~v~Ql~~lmn~il~~~~~~L~i~~Y~Vipl 731 (961)
T 1e7u_A 652 AGALVIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCIST 731 (961)
T ss_dssp EEEECGGGCEECSSTTCCEEEEEEESCTTCSCCCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCEEEE
T ss_pred EEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEC
T ss_conf 98763343798502579569999726877566775238984585443436499999999999863588828883049987
Q ss_pred CCCCCEEEEEC-CCCHHHHHHHHH---------HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 18966465536-766899997321---------59999987699999997660889999998866899999876368989
Q 004650 530 GQDEGLLEFIP-SRSLAQILSEHR---------SIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRH 599 (740)
Q Consensus 530 ~~~~GlIE~V~-~~tl~~I~~~~~---------~l~~~l~~~~~~~~~~~~~~~~~~~~F~~S~A~ysv~tyiLgigDRH 599 (740)
|+++|+||||+ +.|+++|++.++ .+.+|+.+.+++++.+ ..+++||++|||+|||+||||||||||
T Consensus 732 s~~~GlIE~V~ns~tl~~I~~~~~g~~~~f~~~~L~~w~~~~~~~~~~~----~~ar~~F~~S~A~ySvv~YILGigDRH 807 (961)
T 1e7u_A 732 GDKIGMIEIVKDATTIAKIQQSTVGNTGAFKDEVLSHWLKEKCPIEEKF----QAAVERFVYSCAGYCVATFVLGIGDRH 807 (961)
T ss_dssp ETTEEEEECCSSEEEHHHHHHHHSCSSSCCCSSHHHHHHHHHCCSHHHH----HHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHH----HHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 7887757765997469999985367522244168999999859986899----999999999889998998970055788
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCC-----CCCCCCCCCHHHHHHHCCCC---CCCCCCHHHHHHHHHHHHHHCHHHHH
Q ss_conf 98423706898899870222389988-----88998545299999828976---51200208999999999971838999
Q 004650 600 LDNLLLRDDGRLFHVDFGYILGRDPK-----PFPPPMKLCKEMVEAMGGAE---SQYYTRFKSYCCEAYNILRKSSNLIL 671 (740)
Q Consensus 600 ~dNIli~~~G~lfHIDFG~ilg~~~~-----~f~~PFrLT~~mv~~mgg~~---s~~~~~F~~~c~~a~~~LR~~~~~i~ 671 (740)
++||||+++|++||||||++||+.+. |+.||||||++|+++||+.| |+.||.|+..|+.+|.+||+|++.|+
T Consensus 808 ~~NILid~tG~v~HIDFG~~f~~~~~~l~~~pE~vPFRLT~~mv~~mG~~g~e~s~~fg~F~~~c~~~~~~LR~~~~~l~ 887 (961)
T 1e7u_A 808 NDNIMISETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLI 887 (961)
T ss_dssp GGGEEEETTCCEEECCCCCC----------CCCCCSSCCCHHHHHHTTCCSSCCCHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CCCEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76568835777898853343246865567788889842479999985656776645278999999999999997589999
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
Q ss_conf 9999970399998778925789999997099999999999999999998626-357999999998741
Q 004650 672 NLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSA-LFPQMVETIHRWAQY 738 (740)
Q Consensus 672 ~ll~lm~~~~ip~~~~~~~~~i~~l~~~l~l~~s~~~a~~~~~~lI~~s~~~-~~t~~~~~~h~~a~~ 738 (740)
+++++|+.+++|||+..+ ++.+++++|++++||++|.++|.++|++|.++ +.|+++.++|.+++.
T Consensus 888 ~ll~lm~~~~lp~~~~~~--~i~~lr~rf~l~~se~eA~~~~~~lI~~s~~~~~t~~~n~~~h~~~gi 953 (961)
T 1e7u_A 888 ILFSMMLMTGMPQLTSKE--DIEYIRDALTVGKSEEDAKKYFLDQIEVCRDKGWTVQFNWFLHLVLGI 953 (961)
T ss_dssp HHHHHHHHHSCSSCCCHH--HHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTTCC
T ss_pred HHHHHHHCCCCCCCCCHH--HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
T ss_conf 999998469997658658--999999974799999999999999999997268758743599998751
No 5
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=1.00 E-value=1 Score=1144.93 Aligned_cols=567 Identities=47% Similarity=0.816 Sum_probs=535.0
Q ss_pred EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 313877778991068999997420258776789999577999988842-8999999988899999725763106026865
Q 004650 172 IVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILK-YPPTRTLSGDEKQLLWKFRFSLMSEKRALTK 250 (740)
Q Consensus 172 ~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~-~~p~~~L~~~ek~llW~~R~~l~~~p~aL~k 250 (740)
.++|||++.+||+|.||++|+||+++|..|+++||+++++++|+.|+. +||++.|+++||++||+||+||+++|+||||
T Consensus 2 ~~~d~~~~~~n~~e~k~~~l~r~~~~~~~d~~lkP~~~~r~~L~~i~~r~~p~~~Lt~eek~llWk~R~~l~~~~~aL~k 81 (696)
T 2x6h_A 2 SHMDSEIQMENLVERKHHRLARSERSGISDRDAKPTASIRDQLHTIVYRYPPTYVLSSEEQDLVWKFRFYLSSHKKALTK 81 (696)
T ss_dssp ------------------------------------CTTHHHHHHHHHHSCSSCCCCSSHHHHHHHHHTTCCCCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 97870116788589999997653015888756797989999999999608997769999999999729998418068889
Q ss_pred HHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-----
Q ss_conf 422456999887999999823778999756745049999998799999999721992479998999999863156-----
Q 004650 251 FLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFER----- 325 (740)
Q Consensus 251 fL~sV~W~~~~ev~~a~~lL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~d~~L~~yL~QLVQaLkyE~----- 325 (740)
||+||+|+++.|++||++||..|+|++|+||||||++.|+|+.||+|||++|++++|++|++||||||||||||.
T Consensus 82 fL~sv~W~~~~e~~~a~~lL~~W~~~~~~dALeLL~~~f~~~~VR~yAV~~L~~~~de~L~~YLlQLVQALKyE~~~~~~ 161 (696)
T 2x6h_A 82 FLKCINWKLEDEVTQALWMLANWAPMDVEDALELLSPTFTHPQVRKYAVSRLAQAPDEDLLLYLLQLVQALKYEDPRHIV 161 (696)
T ss_dssp HGGGTTTSCHHHHHHHHHHHHHSCCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHGGGSCHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHC
T ss_conf 99437899989999999998468899999999870643799899999999997189689999999999999704522211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 004650 326 -------------------------------------------------------------------------------- 325 (740)
Q Consensus 326 -------------------------------------------------------------------------------- 325 (740)
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (696)
T 2x6h_A 162 HLHGCIFPERDVVRSILDDNGSLLDQSSLSDLSATSSGLHASVIPANQRAASVLAAIKSDKSVSPGSAGGSGSGGQGSVA 241 (696)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23332000000000112221000001111233322334332233210001111012233222334445554444323234
Q ss_pred --------------------------CC-------CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC-CCHH---HHHHH
Q ss_conf --------------------------76-------03899999998003802488998876543258-6034---54278
Q 004650 326 --------------------------SD-------KSRLSQFLVQRSSHNIELASFLRWYVSVEFHD-PVHA---KRFYS 368 (740)
Q Consensus 326 --------------------------~~-------~s~L~~fLi~ra~~n~~i~~~l~W~L~~e~~~-~~~~---~~~~~ 368 (740)
++ +|+|++|||+||++|++|||+|||+|++|+++ +... ..+..
T Consensus 242 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLl~rA~~n~~i~h~l~W~L~~e~~~~~~~~~~~~~~~~ 321 (696)
T 2x6h_A 242 LPNPSAPATPGSSSLPCDSNSNALMLAEGISFGSVPANLCTFLIQRACTNATLANYFYWYLSIEVEEVESVRKQDERAHD 321 (696)
T ss_dssp -------------------------------------CHHHHHHHHHTTCHHHHHHHHHHHHHHHCC-----CCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 66544433334445664433322232100135556777999999998528666899998757123476311211306899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH---HCCCCCCCCCC
Q ss_conf 999999999841999998740588999999999999999998872268888278999999999711---00356567883
Q 004650 369 THEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKLRQLLSGL---LSELTYFEEPI 445 (740)
Q Consensus 369 ~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~~~~~~~k~~~l~~~L~~~---~~~l~~~~~~~ 445 (740)
+|..+++.++..+.+++ ..+.++++.+.+|++|+++|.+|++.+|..+.++.+++++|++.|++. ..++..++ ++
T Consensus 322 ~~~~il~~~l~~l~~g~-~~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~~~~~~~k~e~L~~~L~~~~~~~~~l~~~~-~~ 399 (696)
T 2x6h_A 322 MYAMVLKMFLKVLENGN-FNLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMFKVNFTNFE-PI 399 (696)
T ss_dssp HHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHSTTSSSSCTTSCC-CE
T ss_pred HHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCC-CC
T ss_conf 99999999999863347-53189999999999999999999998711686378899999998532111000102378-75
Q ss_pred CCCCCCCEEEEEEECCCCEEECCCCCEEEEEEEECC-CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 358999368998832864320567612899999659-9902369984786325699999999999998515998411242
Q 004650 446 RSPLAPNILITGIVPSESSIFKSALHPLRLTFRTAS-GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPY 524 (740)
Q Consensus 446 ~lP~~p~~~i~~i~~~~~~v~~S~~~P~~l~f~~~d-g~~~~~i~K~gDDlRqD~lvlQli~lm~~ll~~~~ldl~l~~Y 524 (740)
++|++|++.|.+|.+++|+||+|+++|++|+|+|+| |+.|.+|||+|||||||++++|+|++||.+|++++++++++||
T Consensus 400 ~lP~~p~v~I~~~~~~~~~V~~S~~~P~~l~~~gsD~G~~y~~i~K~gDDLRQD~rv~Ql~~lmn~il~~~~~~L~i~~Y 479 (696)
T 2x6h_A 400 PFPLDPEIYITKIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPY 479 (696)
T ss_dssp ECSSCTTSEEEEECGGGCEECSSSSCCEEEEEEETTTTCEEEEEEECSSCTHHHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred CCCCCCCEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECC
T ss_conf 67999876999994371798330469748999963788704578743765421689999999999999847998377530
Q ss_pred EEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 79982189664655367668999973215999998769999999766088999999886689999987636898998423
Q 004650 525 NVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLL 604 (740)
Q Consensus 525 ~vip~~~~~GlIE~V~~~tl~~I~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~F~~S~A~ysv~tyiLgigDRH~dNIl 604 (740)
+|+|+|+++|+||||++.|+++|+++++++.+|+.+.+|++..++++..++++||++|||+|||+||||||||||++|||
T Consensus 480 ~Vipls~~~GLIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGlGDRH~~NIL 559 (696)
T 2x6h_A 480 KVLATSSKHGFLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNLL 559 (696)
T ss_dssp CEEESSTTCEEEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEE
T ss_pred EEEECCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 79963677872345797559999870670999999878896201242799999999999999999998348889976568
Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC
Q ss_conf 70689889987022238998888998545299999828976512002089999999999718389999999970399998
Q 004650 605 LRDDGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPD 684 (740)
Q Consensus 605 i~~~G~lfHIDFG~ilg~~~~~f~~PFrLT~~mv~~mgg~~s~~~~~F~~~c~~a~~~LR~~~~~i~~ll~lm~~~~ip~ 684 (740)
|+++|++||||||++||++|+||+||||||++|+++|||.++++|+.|+..|+.+|.+||+|++.|++++++|+++++||
T Consensus 560 id~tG~v~HIDFG~~f~~~p~pe~VPFRLT~~mv~~mG~~g~eg~~~Fr~~c~~~~~~LR~~~~~il~ll~lml~~~lp~ 639 (696)
T 2x6h_A 560 LTTNGKLFHIDFGYILGRDPKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLNLFSLMVDATVPD 639 (696)
T ss_dssp ECTTSCEEECCCCSCTTCCSSSCCCSSCCCHHHHHHTTSSSSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTCCCTT
T ss_pred EECCCCEEEEEEHHHHCCCCCCCCCCEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
T ss_conf 80789989885345536688776798631799999838977610899999999999999867899999999997589975
Q ss_pred CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
Q ss_conf 77892578999999709999999999999999999862635799999999874109
Q 004650 685 IASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 740 (740)
Q Consensus 685 ~~~~~~~~i~~l~~~l~l~~s~~~a~~~~~~lI~~s~~~~~t~~~~~~h~~a~~~r 740 (740)
|+..++.++.++++||++++||++|.++|.++|++|+++++|+++|++|.||||||
T Consensus 640 ~~~~~~~~i~~l~~rf~l~lseeea~~~~~~lI~~S~~s~~t~~~d~~h~~aq~~r 695 (696)
T 2x6h_A 640 IALEPDKAVKKVEENLQLGLTDEEAVQHLQSLLDVSITAVMPALVEQIHRFTQYWR 695 (696)
T ss_dssp TTSSGGGHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 46687899999999837999999999999999999985344889999999999963
No 6
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=1.00 E-value=1 Score=1143.86 Aligned_cols=546 Identities=51% Similarity=0.840 Sum_probs=513.2
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHH
Q ss_conf 89999974202587767899995779999888428999999988899999725763106026865422456999887999
Q 004650 186 HKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQ 265 (740)
Q Consensus 186 ~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~L~~~ek~llW~~R~~l~~~p~aL~kfL~sV~W~~~~ev~~ 265 (740)
.||++|+||+++|..|+|+|||+++|++|+.|+.+||++.|+++||++||+|||||.++|+||||||+||+|+++.|++|
T Consensus 3 ~k~~~l~rs~~~~~~d~~lkP~~~~r~~L~~I~~~~p~~~Lt~~ek~llWk~R~~l~~~~~aL~kfL~sV~W~~~~e~~~ 82 (614)
T 3ls8_A 3 SKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQ 82 (614)
T ss_dssp --------------CGGGCCCCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHTHHHHTTCGGGHHHHHTTCCTTSHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHH
T ss_conf 78888987333789987889598999999999648999889999999999999998438267888852289999899999
Q ss_pred HHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC-----------------
Q ss_conf 999823778999756745049999998799999999721992479998999999863156760-----------------
Q 004650 266 ALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFERSDK----------------- 328 (740)
Q Consensus 266 a~~lL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~d~~L~~yL~QLVQaLkyE~~~~----------------- 328 (740)
|++||..|+|++|++|||||++.|+|+.||+|||+||++++|++|++||||||||||||++++
T Consensus 83 a~~LL~~W~~i~~~dALELL~~~f~d~~VR~yAV~~L~~~~D~eL~lYLlQLVQALKyE~~~~~~~~~~~~~~~~~~~~~ 162 (614)
T 3ls8_A 83 ALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDSQSSVS 162 (614)
T ss_dssp HHHHHHHSCCCCHHHHGGGGSTTCCCHHHHHHHHHHHTTSCHHHHHHTHHHHHHHGGGSCHHHHHHTC------------
T ss_pred HHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99998507889988998747666898899999999997289689999999877764203323211012321112234432
Q ss_pred ---------------------------------------------HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf ---------------------------------------------38999999980038024889988765432586034
Q 004650 329 ---------------------------------------------SRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHA 363 (740)
Q Consensus 329 ---------------------------------------------s~L~~fLi~ra~~n~~i~~~l~W~L~~e~~~~~~~ 363 (740)
|+|++|||+||++|++|||+|||||++|++++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLi~RAl~n~~ig~~lyW~L~~E~~~~~~~ 242 (614)
T 3ls8_A 163 ENVSNSGINSAEIDSSQIITSPLPSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQ 242 (614)
T ss_dssp ------------CCGGGSTTCCCCC-------------------CCCHHHHHHHHHHTCHHHHHHHHHHHHHHHHCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCC
T ss_conf 22344433222233221112333333345521012222224446783899999987348888877776602323575322
Q ss_pred ---HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-CCCC
Q ss_conf ---542789999999998419999987405889999999999999999988722688882789999999997110-0356
Q 004650 364 ---KRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKLRQLLSGLL-SELT 439 (740)
Q Consensus 364 ---~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~~~~~~~k~~~l~~~L~~~~-~~l~ 439 (740)
..+..+|..+++.++..+..+++. ...+++.+.+|.+|+++|.++++.++..++++.+|.++|++.|++.. .++.
T Consensus 243 ~~~~~~~~~Y~~vl~~~l~~l~~g~~~-~~~~r~~L~~Q~~~~~~L~~l~~~v~~~~~~~~kk~e~L~~~L~~~~~~~l~ 321 (614)
T 3ls8_A 243 QRDPKTHEMYLNVMRRFSQALLKGDKS-VRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLS 321 (614)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHCHHHHCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCCC
T ss_conf 112278899999999999998726814-6899999999999999999999999850243688999999997150010124
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 56788335899936899883286432056761289999965999023699847863256999999999999985159984
Q 004650 440 YFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTASGGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDL 519 (740)
Q Consensus 440 ~~~~~~~lP~~p~~~i~~i~~~~~~v~~S~~~P~~l~f~~~dg~~~~~i~K~gDDlRqD~lvlQli~lm~~ll~~~~ldl 519 (740)
.+ .++++|++|.++|.+|.+++|+||+|+++|++|+|+|+||+.|.+|||+|||||||++++|++++||++|+++++|+
T Consensus 322 ~~-~~~~lPl~P~v~I~~i~p~~~~V~~Sk~~P~~l~~~gsDG~~y~~i~K~gDDLRQD~~~~Ql~~l~n~il~~~~ldL 400 (614)
T 3ls8_A 322 DV-ELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDL 400 (614)
T ss_dssp SC-SSEEETTEEEEEEEEECGGGCEECSSTTCCEEEEEEETTSCEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CC-CCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 57-88789999866999996580688511468279999926998877887438851398999999999999999669984
Q ss_pred CCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 11242799821896646553676689999732159999987699999997660889999998866899999876368989
Q 004650 520 HLTPYNVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRH 599 (740)
Q Consensus 520 ~l~~Y~vip~~~~~GlIE~V~~~tl~~I~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~F~~S~A~ysv~tyiLgigDRH 599 (740)
+++||+|+|||+++|+||||+++|+.+|+.+.+.+.+|+.+.+|++.+++++..++++||++|||||||+||||||||||
T Consensus 401 ~i~~Y~Vipls~~~GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGigDRH 480 (614)
T 3ls8_A 401 KLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRH 480 (614)
T ss_dssp CCCCCCEEESSSSEEEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred EEECCEEEEECCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCC
T ss_conf 45410799945987658871786589998705869999998588866654455999999999877776751032346888
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCC
Q ss_conf 98423706898899870222389988889985452999998289765120020899999999997183899999999703
Q 004650 600 LDNLLLRDDGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAG 679 (740)
Q Consensus 600 ~dNIli~~~G~lfHIDFG~ilg~~~~~f~~PFrLT~~mv~~mgg~~s~~~~~F~~~c~~a~~~LR~~~~~i~~ll~lm~~ 679 (740)
|+||||+++|++||||||++||++|+|++||||||++|+++|||.+++.|+.|+..|+.+|.+||+|++.|++++++|++
T Consensus 481 ~~NILld~tG~v~HIDFG~~f~~~p~pe~vPFRLT~~mv~~mG~~~~e~f~~Fr~~c~~~~~~LR~~~~~il~l~~lM~~ 560 (614)
T 3ls8_A 481 LDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVD 560 (614)
T ss_dssp TTSEEECTTSCEEECCCSSCTTCCSSSSCCSSCCCHHHHHHTTCTTSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTTT
T ss_pred CCCEEECCCCCEEEEEHHHHHCCCCCCCCCCEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
T ss_conf 76666737898866411776535887788874348999998399887218899999999999998777899999999705
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 999987789257899999970999999999999999999986263579999999
Q 004650 680 SNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIH 733 (740)
Q Consensus 680 ~~ip~~~~~~~~~i~~l~~~l~l~~s~~~a~~~~~~lI~~s~~~~~t~~~~~~h 733 (740)
+|+||++..++.++.++++||++++||++|.++|.++|++|+++++|+++|.+|
T Consensus 561 s~lp~~~~~~~~~i~~l~~rf~l~lse~ea~~~~~~lI~~S~~s~~~~~~d~~h 614 (614)
T 3ls8_A 561 ANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIH 614 (614)
T ss_dssp SCCHHHHTSGGGHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHC--------
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999744557589999999973899999999999999999988504998888519
No 7
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=1.00 E-value=1 Score=37.44 Aligned_cols=65 Identities=20% Similarity=0.318 Sum_probs=54.0
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCC----CCCEEEEEEEEEEECCCCC-CCCCCEEEEEECC
Q ss_conf 9864223178014547878347257899950699----8732365799972126762-2323346773059
Q 004650 3 PMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCG----KDERLVGGTTILLFNSKMQ-LKTGKQKLRLWPG 68 (740)
Q Consensus 3 ~~~~Wnewi~FpI~~~dLPr~a~L~~ti~~~~~~----~~~~~iG~~~~~LFd~~~~-Lr~G~~~L~lw~~ 68 (740)
+.+.|+|.|...|...+. ..+-|.|+++-+... +.+.++|.+-+||++..|. |+.|.+.|.++..
T Consensus 88 k~P~w~EtIKi~LP~~~~-~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~dG~~L~DG~H~L~vyk~ 157 (220)
T 3l4c_A 88 KQPRWFETVKVAIPIEDV-NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYDGTTLRDGEHDLIVYKA 157 (220)
T ss_dssp SSCCCCEEEEEEECTTSS-TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTTSCBCCSEEEEEEEEEC
T ss_pred CCCCCEEEEEEEECHHHC-CCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEECCCCEEEEEEEC
T ss_conf 999850759995070126-7817999999730453455667802899997325788587549888889974
No 8
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=1.00 E-value=1 Score=33.32 Aligned_cols=10 Identities=30% Similarity=0.597 Sum_probs=4.7
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999711
Q 004650 425 EKLRQLLSGL 434 (740)
Q Consensus 425 ~~l~~~L~~~ 434 (740)
+.+++.+.+.
T Consensus 271 ~~~~~~~gd~ 280 (624)
T 1djx_A 271 RHLRAILGPI 280 (624)
T ss_dssp HHHHHHHGGG
T ss_pred HHHHHHHHHH
T ss_conf 9999997655
No 9
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=31.80 Aligned_cols=50 Identities=24% Similarity=0.290 Sum_probs=42.5
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECC
Q ss_conf 98642231780145478783472578999506998732365799972126
Q 004650 3 PMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 52 (740)
Q Consensus 3 ~~~~Wnewi~FpI~~~dLPr~a~L~~ti~~~~~~~~~~~iG~~~~~LFd~ 52 (740)
.++.|||...|++.-.++...+.|.|.||+.........+|.+.++|-+-
T Consensus 49 ~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l 98 (140)
T 2dmh_A 49 LNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDL 98 (140)
T ss_dssp SSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGT
T ss_pred CCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHH
T ss_conf 89961757999831656577888999999798777995689999998994
No 10
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=1.00 E-value=1 Score=31.57 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=37.7
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCC
Q ss_conf 986422317801454787834725789995069987323657999721267
Q 004650 3 PMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNSK 53 (740)
Q Consensus 3 ~~~~Wnewi~FpI~~~dLPr~a~L~~ti~~~~~~~~~~~iG~~~~~LFd~~ 53 (740)
.+|.|||...|+|...+++ +..|.|+||+.........+|.+.++|-+..
T Consensus 70 lnP~wnE~f~f~v~~~~l~-~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~ 119 (138)
T 1wfm_A 70 LHTTWEEGLVLPLAEEELP-TATLTLTLRTCDRFSRHSVAGELRLGLDGTS 119 (138)
T ss_dssp SSEECSSCEEEECCTTSST-TCEEEEEEEECCSSCTTSCSEEEEEESSSSS
T ss_pred CCCCCCCEEEEEECHHHCC-CCEEEEEEEECCCCCCCCEEEEEEEECCCCC
T ss_conf 9981885599986499938-7889999998998888957899999743246
Done!