Query 004651
Match_columns 739
No_of_seqs 303 out of 2318
Neff 4.6
Searched_HMMs 29240
Date Tue Mar 26 18:39:39 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004651.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1948-1951//hhsearch_pdb/004651hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 1.0 1 1 207.8 -0.3 201 439-694 27-236 (329)
2 1nlt_A Protein YDJ1, mitochond 1.0 1 1 160.2 1.1 133 545-694 30-166 (248)
3 3apo_A DNAJ homolog subfamily 1.0 1 1 144.6 0.4 69 440-510 21-89 (780)
4 2l6l_A DNAJ homolog subfamily 1.0 1 1 143.9 6.0 71 440-512 10-86 (155)
5 3apq_A DNAJ homolog subfamily 1.0 1 1 139.4 5.1 68 440-509 2-69 (210)
6 2ctq_A DNAJ homolog subfamily 1.0 1 1 138.9 8.5 69 440-510 20-88 (112)
7 2yua_A Williams-beuren syndrom 1.0 1 1 138.2 7.2 70 440-511 17-86 (99)
8 2ctw_A DNAJ homolog subfamily 1.0 1 1 135.6 8.3 69 440-510 17-85 (109)
9 1bq0_A DNAJ, HSP40; chaperone, 1.0 1 1 134.8 2.6 68 440-509 3-70 (103)
10 1wjz_A 1700030A21RIK protein; 1.0 1 1 133.9 4.4 69 439-509 15-89 (94)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=1.00 E-value=1 Score=207.78 Aligned_cols=201 Identities=18% Similarity=0.236 Sum_probs=118.4
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 78852113644689999799999999999983999999927999999999999997642113332005677766666542
Q 004651 439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFR 518 (739)
Q Consensus 439 ~~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~p~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~~e~~~d~F~ 518 (739)
.+|||+||||++ +|+.+|||+|||+||++||||+++. +.|+++|++|++||++|+||.+|+.||.++.... ...|.
T Consensus 27 ~~d~Y~vLgv~~--~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~-~~~~~ 102 (329)
T 3lz8_A 27 LKDYYAILGVQP--TDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRN-DPGFG 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC-CCCCC
T ss_conf 469799839699--9999999999999999878898998-4799999999999998541310023351112466-77756
Q ss_pred H-CC--C-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC-E
Q ss_conf 0-02--4-5557998777788999998877898874312125433464113441147666433623213245558982-4
Q 004651 519 R-FQ--S-ASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQECNDYHQAKDGDG-W 593 (739)
Q Consensus 519 ~-F~--g-~~~~~g~~GfFGggf~rseg~dEd~i~isr~V~C~kC~GsG~~~~t~r~~skar~C~~Ck~~H~AkdGsG-~ 593 (739)
. |. + .....++..+|...|+. .|.+ .. .. . +.+ |.- .
T Consensus 103 ~~~~~~~~~f~~~~f~diF~~~Fg~--------------------~g~~-----~~-~~----~-------~~~-g~Dl~ 144 (329)
T 3lz8_A 103 RQRQTHEQSYSQQDFDDIFSSMFGQ--------------------QAHQ-----RR-RQ----H-------AAR-GHDLE 144 (329)
T ss_dssp -----------------------------------------------------------------------CCC-CCCEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHCC--------------------CCCC-----CC-CC----C-------CCC-CCCEE
T ss_conf 6665556776777534556765067--------------------6778-----87-77----7-------678-87779
Q ss_pred EEEEECCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCE--ECCCEEEEEEEECCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 997621665213799871255556993177275652589970--0465028799864654689-9534467899999999
Q 004651 594 VEQSSEPLFFGIFQKVDVPCAYVCANSRIYNATDWYICQGMR--CPANTHKPSFHVNTSVTSK-HNTSKGTSSGQRGGRM 670 (739)
Q Consensus 594 Ve~~~q~~~pGm~qqi~~pC~y~C~GsGv~d~t~Ca~CqG~G--~v~~tk~vsV~IPaGv~d~-~~rikg~g~~~r~G~~ 670 (739)
++... . .-. ...|..+-..-....|.+.| .++..+.++|+||+|+.++ ..|++|.|..+.+|+.
T Consensus 145 ~~l~v-----------s-lee-a~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~ 211 (329)
T 3lz8_A 145 IEVAV-----------F-LEE-TLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGP 211 (329)
T ss_dssp EEECC-----------C-TTG-GGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CC
T ss_pred EEEEC-----------C-HHH-HHHCCCEEEEEEEEEECCCEEEEEECCEEEEEECCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 99842-----------3-454-5432552799987751487079996046999967999999978998552167879999
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHHHH
Q ss_conf 9984246-88846899999998662
Q 004651 671 PPPNLEE-TMTEDEFLEWLQNAVQA 694 (739)
Q Consensus 671 Pgdl~~~-~~~e~eff~wlq~~~~~ 694 (739)
|||+++. .+.+|++|++.-++|+.
T Consensus 212 ~GDL~v~I~v~~h~~F~R~G~DL~~ 236 (329)
T 3lz8_A 212 NGDLWLVIHIAPHPLFDIVGHNLEI 236 (329)
T ss_dssp CCCEEEEECCCCCSSCEEETTEEEE
T ss_pred CCCEEEEEEEECCCCCEECCCCEEE
T ss_conf 8768999999517750772881899
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=1.00 E-value=1 Score=160.22 Aligned_cols=133 Identities=17% Similarity=0.275 Sum_probs=108.9
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEC
Q ss_conf 89887431212543346411344114766643362321324555898249976216652137998712555569931772
Q 004651 545 DDPFGESRRIACKKCNNFHVWIETKKSKASARWCQECNDYHQAKDGDGWVEQSSEPLFFGIFQKVDVPCAYVCANSRIYN 624 (739)
Q Consensus 545 Ed~i~isr~V~C~kC~GsG~~~~t~r~~skar~C~~Ck~~H~AkdGsG~Ve~~~q~~~pGm~qqi~~pC~y~C~GsGv~d 624 (739)
++.+.+.+.+.|+.|+|+| +.++. ...|+.|+ |+|++.... ++++ |+++++++|+ .|.|.|.++
T Consensus 30 ~k~i~~~r~~~C~~C~G~G-----~~~g~-~~~C~~C~-------G~G~~~~~~-~~g~-~~~~~~~~C~-~C~G~G~~i 93 (248)
T 1nlt_A 30 TAKLALNKQILCKECEGRG-----GKKGA-VKKCTSCN-------GQGIKFVTR-QMGP-MIQRFQTECD-VCHGTGDII 93 (248)
T ss_dssp EEEEEEEEEEECTTTTTCS-----BSTTT-CCCCTTSS-------SSSCEEEEE-ESSS-EEEEEECSCT-TCSSSSSCC
T ss_pred EEEEEEEEEEECCCCCCCC-----CCCCC-CCCCCCCC-------CCCEEEEEE-ECCC-EEEEEEECCC-CCCCCCEEE
T ss_conf 6898744777689971745-----77898-75588878-------974797999-6274-4878887288-877768780
Q ss_pred --CCCCCCCCCCEECCCEEEEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Q ss_conf --756525899700465028799864654689-95344678999999999984246-88846899999998662
Q 004651 625 --ATDWYICQGMRCPANTHKPSFHVNTSVTSK-HNTSKGTSSGQRGGRMPPPNLEE-TMTEDEFLEWLQNAVQA 694 (739)
Q Consensus 625 --~t~Ca~CqG~G~v~~tk~vsV~IPaGv~d~-~~rikg~g~~~r~G~~Pgdl~~~-~~~e~eff~wlq~~~~~ 694 (739)
.++|..|+|.|++.+++.++|+||+|+.++ ..+++|.|+... ++.||||++. .+.+|++|++.-+||+.
T Consensus 94 ~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL~~ 166 (248)
T 1nlt_A 94 DPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLVY 166 (248)
T ss_dssp CTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEEEE
T ss_pred CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCC-CCCCCEEEEEEEEECCCCCEEECCEEEE
T ss_conf 467777556898408664789999799961897999921035789-9875219999998038653113897889
No 3
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=1.00 E-value=1 Score=144.60 Aligned_cols=69 Identities=38% Similarity=0.568 Sum_probs=65.3
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 88521136446899997999999999999839999999279999999999999976421133320056777
Q 004651 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRR 510 (739)
Q Consensus 440 ~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~p~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~~ 510 (739)
.|||+||||++ +|+.++||+|||+|++++||||+++++.+.++|++|++||++|+||.+|+.||.++..
T Consensus 21 ~~~y~~lg~~~--~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~ 89 (780)
T 3apo_A 21 QNFYSLLGVSK--TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK 89 (780)
T ss_dssp --CHHHHTCCT--TCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC---
T ss_pred CCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
T ss_conf 99899809899--9999999999999999878698999757999999999999997176888988764112
No 4
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=143.91 Aligned_cols=71 Identities=28% Similarity=0.531 Sum_probs=64.1
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 8852113644689999799999999999983999999927------999999999999997642113332005677766
Q 004651 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE------KAVEAFKKLQNAYEVLFDSFKRKAYDDELRREE 512 (739)
Q Consensus 440 ~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~p------~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~~e~ 512 (739)
.|||+||||++ +++.++||+|||+|++++||||++.++ .|.+.|++|++||++|+||.+|+.||..+...+
T Consensus 10 ~~~y~iLgv~~--~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~ 86 (155)
T 2l6l_A 10 KDWYSILGADP--SANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDD 86 (155)
T ss_dssp SHHHHHHTCCT--TCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHH
T ss_pred CCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH
T ss_conf 98257538999--979999999999999987819898887556789999999999999998479899999999735312
No 5
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=1.00 E-value=1 Score=139.39 Aligned_cols=68 Identities=38% Similarity=0.563 Sum_probs=64.7
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 8852113644689999799999999999983999999927999999999999997642113332005677
Q 004651 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR 509 (739)
Q Consensus 440 ~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~p~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~ 509 (739)
.|||+||||++ +|+.++||+|||+|++++||||+++++.+.++|++|++||++|+||.+|+.||.++.
T Consensus 2 ~~~y~~l~~~~--~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~ 69 (210)
T 3apq_A 2 QNFYSLLGVSK--TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE 69 (210)
T ss_dssp CCHHHHHTCCT--TCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
T ss_conf 78799869999--989999999999999987959899975899999999999999679999999987523
No 6
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=138.87 Aligned_cols=69 Identities=39% Similarity=0.536 Sum_probs=65.4
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 88521136446899997999999999999839999999279999999999999976421133320056777
Q 004651 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRR 510 (739)
Q Consensus 440 ~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~p~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~~ 510 (739)
.|||+||||++ +++.++||+|||+|++++|||++++++.+.+.|++|++||++|+||.+|+.||..+..
T Consensus 20 ~d~Y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 88 (112)
T 2ctq_A 20 EDYYTLLGCDE--LSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS 88 (112)
T ss_dssp CCHHHHTTCCT--TSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred CCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999849999--9899999999999999888398999679999999999999998898899999986311
No 7
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=138.23 Aligned_cols=70 Identities=33% Similarity=0.574 Sum_probs=65.6
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 885211364468999979999999999998399999992799999999999999764211333200567776
Q 004651 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRRE 511 (739)
Q Consensus 440 ~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~p~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~~e 511 (739)
.|||+||||++ +++.++||+|||+|++++|||+++.++.+.+.|++|++||++|+||.+|+.||..+...
T Consensus 17 ~~~Y~vLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~ 86 (99)
T 2yua_A 17 TALYDLLGVPS--TATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSD 86 (99)
T ss_dssp SHHHHHHTCCT--TCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCH
T ss_pred CCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
T ss_conf 69988829999--98999999999999999883989997899999999999999987989999999863220
No 8
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=1.00 E-value=1 Score=135.64 Aligned_cols=69 Identities=39% Similarity=0.576 Sum_probs=65.2
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 88521136446899997999999999999839999999279999999999999976421133320056777
Q 004651 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRR 510 (739)
Q Consensus 440 ~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~p~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~~ 510 (739)
.|||+||||++ +++.++||++||+|++++|||+++.++.+.+.|++|++||++|+||.+|+.||.++..
T Consensus 17 ~~~Y~vLgv~~--~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 17 ESLYHVLGLDK--NATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp CCHHHHHTCCT--TCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
T ss_conf 79999919699--9999999999999999988397888679999999999999998597799999873651
No 9
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=1.00 E-value=1 Score=134.84 Aligned_cols=68 Identities=41% Similarity=0.687 Sum_probs=64.3
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 8852113644689999799999999999983999999927999999999999997642113332005677
Q 004651 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR 509 (739)
Q Consensus 440 ~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~p~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~ 509 (739)
.|||+||||++ +++.++||++||+|++++|||+++.++.+.+.|++|++||++|+||.+|+.||..+.
T Consensus 3 ~~~y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 70 (103)
T 1bq0_A 3 QDYYEILGVSK--TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH 70 (103)
T ss_dssp CCSTTTTSSCS--SCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTT
T ss_pred CCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99899929699--989999999999999998849788857999999999999999889889999998754
No 10
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=1.00 E-value=1 Score=133.92 Aligned_cols=69 Identities=32% Similarity=0.539 Sum_probs=63.4
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 7885211364468999979999999999998399999992------7999999999999997642113332005677
Q 004651 439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN------EKAVEAFKKLQNAYEVLFDSFKRKAYDDELR 509 (739)
Q Consensus 439 ~~d~YeILGV~~~~~as~~eIKKAYRkLAlk~HPDKn~~~------p~A~e~Fk~I~~AYevLsDp~kR~~YD~~~~ 509 (739)
..|||+||||++ +++.++||+|||+|++++|||+++.+ +.+.+.|++|++||++|+||.+|+.||..+.
T Consensus 15 ~~~~y~iLgv~~--~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 15 KKDWYSILGADP--SANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSCHHHHTTCCT--TCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCHHHHCCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
T ss_conf 998578709999--979999999999999988809897778714369999999999999999889999999998751
Done!