Query 004653
Match_columns 739
No_of_seqs 339 out of 625
Neff 5.2
Searched_HMMs 29240
Date Tue Mar 26 18:05:17 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004653.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1952-1956//hhsearch_pdb/004653hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fo5_A Thioesterase, adipose a 1.0 1 1 303.3 15.4 208 176-405 37-248 (258)
2 2pso_A STAR-related lipid tran 1.0 1 1 267.0 21.8 185 204-409 48-233 (237)
3 3p0l_A Steroidogenic acute reg 1.0 1 1 266.9 21.0 187 204-406 29-217 (221)
4 1jss_A Stard4, cholesterol-reg 1.0 1 1 263.5 21.1 182 205-403 42-223 (224)
5 2r55_A STAR-related lipid tran 1.0 1 1 262.0 24.6 186 205-404 42-229 (231)
6 1em2_A MLN64 protein; beta bar 1.0 1 1 258.8 21.4 186 204-405 40-227 (229)
7 2e3n_A Lipid-transfer protein 1.0 1 1 231.8 19.3 193 201-404 42-247 (255)
8 3qsz_A STAR-related lipid tran 1.0 1 1 225.9 22.7 179 204-404 1-180 (189)
9 1ln1_A PC-TP, phosphatidylchol 1.0 1 1 222.5 21.0 181 203-404 25-210 (214)
10 2w2x_D 1-phosphatidylinositol- 1.0 1 1 64.0 6.2 81 46-127 26-119 (124)
No 1
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=303.33 Aligned_cols=208 Identities=16% Similarity=0.185 Sum_probs=176.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHC
Q ss_conf 975237988889866767667852--241138998999980998999981488899650899999405589999999865
Q 004653 176 ETLLRQSSDLGGSVRGEGFFEGDI--GDAIEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLN 253 (739)
Q Consensus 176 ~~~~~~w~~~~~~~~~~ls~~~~~--~~~~a~sgWkl~~~~nGVrIy~~~~~~~~~~~~~~Ka~gvVdaspe~VFe~L~d 253 (739)
.-+|++||++||+ ||||+|++ +++++++||++..++||++||+++.. ....+|++++|++||+++|++|+|
T Consensus 37 ~p~~~~w~~~~~~---~l~~~n~~al~~l~~~~gW~~~~~~~gv~Vy~~~~~----~~l~~k~~~~v~~~~~~v~~~L~D 109 (258)
T 3fo5_A 37 VPLSVPWDPSNQV---YLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLEDD----KFLSFHMEMVVHVDAAQAFLLLSD 109 (258)
T ss_dssp SCSEEECCGGGHH---HHHHHHHHHHHHHHTCSCCEEEEEETTEEEEEEECS----SCEEEEEEEEESSCHHHHHHHHHC
T ss_pred CCCCCCCCCCCCE---ECCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECC----CCEEEEEEEEEECCHHHHHHHHHC
T ss_conf 9821165810112---001478878873216589889850799699999789----963999999990999999998849
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEEC-CCC-EEEEEEEECCCCCCCCCCC
Q ss_conf 79755243368887459998651926799999537777889889718999989983-798-0999984046899999999
Q 004653 254 LERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRG-QDG-TYTILQFPAVHKKRPPKSG 331 (739)
Q Consensus 254 ~~~~~R~eWD~~~~e~eVIE~IDe~tDIiY~~~kp~~lP~~vspRDFV~LRswRr~-~DG-sYVIa~~SV~Hp~~Pp~~G 331 (739)
... |++||+++.++++||++|++ +++|+...|.. ++++++||||++|+||+. .+| .|+|+.+||+||.+||++|
T Consensus 110 ~~~--R~~WD~~~~~~~vle~id~~-~ivY~~~~p~~-~~~v~~RDFV~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~g 185 (258)
T 3fo5_A 110 LRQ--RPEWDKHYRSVELVQQVDED-DAIYHVTSPAL-GGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPE 185 (258)
T ss_dssp GGG--GGGTCTTCCEEEEEEEEETT-EEEEEEEECCC-TTCSSCEEEEEEEEEECCSSTTCCEEEEEEEEECTTSCCCTT
T ss_pred CHH--HHHHHHHCCEEEEEEECCCC-EEEEEEECCCC-CCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 116--76760540479999990899-59999904876-678899779999999710689997999999632788999999
Q ss_pred EEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 16699824258998419999999990099999746258864443476542003258999999999997752199
Q 004653 332 YRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 405 (739)
Q Consensus 332 yVRAei~~sGylI~P~~~~~~~~~~~s~VT~I~qvDlKGwl~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~~ 405 (739)
||||+++++||+|+|+++ +.|+|+|+.|+|+ |.+ |.|...+.+ +...+.+...++++++....
T Consensus 186 ~VR~~~~~sg~~I~P~~~------~~t~VtY~~q~dp-G~l---P~~~~n~~g-~s~~~~~t~~~~~~fl~~~~ 248 (258)
T 3fo5_A 186 YRRGETLCSGFCLWREGD------QLTKVSYYNQATP-GVL---NYVTTNVAG-LSSEFYTTFKACEQFLLDNR 248 (258)
T ss_dssp SEECCCSSEEEEEEEEET------TEEEEEEEESCCG-GGH---HHHHHHHHT-SCCHHHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCEEEEEECCC------CCEEEEEEEEECC-CCC---CCEEEECCC-CCHHHHHHHHHHHHHHHHCC
T ss_conf 798897176899998799------9889999994088-877---715783453-66679999999999998646
No 2
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=1.00 E-value=1 Score=267.01 Aligned_cols=185 Identities=18% Similarity=0.192 Sum_probs=160.0
Q ss_pred CCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
Q ss_conf 38998999980998999981488899650899999405589999999865797552433688874599986519267999
Q 004653 204 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVY 283 (739)
Q Consensus 204 a~sgWkl~~~~nGVrIy~~~~~~~~~~~~~~Ka~gvVdaspe~VFe~L~d~~~~~R~eWD~~~~e~eVIE~IDe~tDIiY 283 (739)
...+|++..+++|++||++..+ .++...++|++++|++++++++..++.. |++||+++.++++||++|++++|+|
T Consensus 48 ~~~gW~~~~~~~gi~V~~k~~~-~~~~~~~~K~~~~v~~~~~~v~~~ll~d----r~~Wd~~~~~~~vle~id~~~~I~y 122 (237)
T 2pso_A 48 KFKGWVTCSSTDNTDLAFKKVG-DGNPLKLWKASVEVEAPPSVVLNRVLRE----RHLWDEDFVQWKVVETLDRQTEIYQ 122 (237)
T ss_dssp HCCSCEEECCSSSCEEEEECCC-SSCCCCEEEEEEEESSCHHHHHHHHHHC----GGGTCTTBCCCEEEEEEETTEEEEE
T ss_pred CCCCCEEEECCCCEEEEEEECC-CCCCCEEEEEEEEECCCHHHHHHHHHHH----HHHHHHHHCEEEEEEECCCCCEEEE
T ss_conf 8899879723798699999868-9997179999999868939999999853----6668754235999998399939999
Q ss_pred EEECCCCCCCCCCCCEEEEEEEEEEC-CCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEEE
Q ss_conf 99537777889889718999989983-79809999840468999999991669982425899841999999999009999
Q 004653 284 GTYDPKYLTRWQSKRDFVFSRQWFRG-QDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQ 362 (739)
Q Consensus 284 ~~~kp~~lP~~vspRDFV~LRswRr~-~DGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~s~VT~ 362 (739)
+++++. +++++||||++|+|+++ ++|+|+|+++||+||++||+ |||||+++++||+|+|+++ ++|+|||
T Consensus 123 ~~~~~p---~p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~-g~VR~~~~~~g~~i~P~~~------~~t~vt~ 192 (237)
T 2pso_A 123 YVLNSM---APHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLL-GGVRAVVMDSQYLIEPCGS------GKSRLTH 192 (237)
T ss_dssp EEECCS---SSCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCC-SSEECCEEEEEEEEEECST------TCEEEEE
T ss_pred EEECCC---CCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCC-CCEEEEEECCEEEEEECCC------CCEEEEE
T ss_conf 980278---88677089999999998799979999981358888999-9698999556899997899------9789999
Q ss_pred EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 97462588644434765420032589999999999977521999988
Q 004653 363 MLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANPALKN 409 (739)
Q Consensus 363 I~qvDlKGwl~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~~~~~~ 409 (739)
++++||+||+ |.|++.+.... +..++.+||+.|++.....+
T Consensus 193 ~~~~Dp~G~i---P~~ln~~~~~~---~~~~l~~LR~~~~~~~~~~~ 233 (237)
T 2pso_A 193 ICRIDLKGHS---PEWYSKGFGHL---CAAEVARIRNSFQPLIAEGP 233 (237)
T ss_dssp EEEECCSSSC---TTTTTTHHHHH---HHHHHHHHHHTTSCC-----
T ss_pred EEEECCCCCC---HHHHHHHHHHH---HHHHHHHHHHHHHHHCCCCC
T ss_conf 9996799786---48999888799---99999999999986058998
No 3
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=1.00 E-value=1 Score=266.87 Aligned_cols=187 Identities=18% Similarity=0.271 Sum_probs=162.4
Q ss_pred CCCCCEEEE-EECCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHH-CCCCCCCCCCCCCCCCEEEEEEECCCEEE
Q ss_conf 389989999-8099899998148889965089999940558999999986-57975524336888745999865192679
Q 004653 204 EAHEWKCVR-TLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDV 281 (739)
Q Consensus 204 a~sgWkl~~-~~nGVrIy~~~~~~~~~~~~~~Ka~gvVdaspe~VFe~L~-d~~~~~R~eWD~~~~e~eVIE~IDe~tDI 281 (739)
+++||++.. +++|++||++..+. + +..+|++++|+++|+++|++|+ |.+. |++||+++.++++||++|++++|
T Consensus 29 ~~~gW~~~~~~~~gv~vy~~~~~~--~-g~~~k~~~~v~~~~~~v~~~l~~d~~~--r~~Wd~~~~~~~vle~~~~~t~I 103 (221)
T 3p0l_A 29 NQEGWKKESQQDNGDKVMSKVVPD--V-GKVFRLEVVVDQPMERLYEELVERMEA--MGEWNPNVKEIKVLQKIGKDTFI 103 (221)
T ss_dssp SCTTCEEEEECTTSCEEEEEECSS--S-CEEEEEEEEESSCHHHHHHHHTTTGGG--TTTSCTTCSEEEEEEECSSSEEE
T ss_pred CCCCCEEEEECCCCCEEEEEECCC--C-CEEEEEEEEECCCHHHHHHHHHHCCCH--HHHCCCCHHEEEEEEECCCCEEE
T ss_conf 878873926548996999987488--8-519999999919999999999856500--43327231238999943997699
Q ss_pred EEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEE
Q ss_conf 99995377778898897189999899837980999984046899999999166998242589984199999999900999
Q 004653 282 VYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVT 361 (739)
Q Consensus 282 iY~~~kp~~lP~~vspRDFV~LRswRr~~DGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~s~VT 361 (739)
+|++.++. +++++++||||++|+|++. +|.|+++.+|++||.+||++|||||+++++||+|+|+++ ++++|+||
T Consensus 104 ~y~~~~~~-~~~~v~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~----~~~~t~vt 177 (221)
T 3p0l_A 104 THELAAEA-AGNLVGPRDFVSVRCAKRR-GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAG----SPSKTKLT 177 (221)
T ss_dssp EEEEECC----CCSCCEEEEEEEEEEEC-SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETT----EEEEEEEE
T ss_pred EEEEECCC-CCCCCCCCEEEEEEEEEEC-CCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEECCC----CCCCEEEE
T ss_conf 99950555-6774488469999999971-993999997134888999998488760650899997799----99817999
Q ss_pred EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 997462588644434765420032589999999999977521999
Q 004653 362 QMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANPA 406 (739)
Q Consensus 362 ~I~qvDlKGwl~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~~~ 406 (739)
|++|+|||||+ |.|. +.+.+...|++++.+||+.++..++
T Consensus 178 ~~~~~Dp~G~i---P~~l--vn~~~~~~~~~~~~~Lr~~~~~~~~ 217 (221)
T 3p0l_A 178 WLLSIDLKGWL---PKSI--INQVLSQTQVDFANHLRKRLESHPA 217 (221)
T ss_dssp EEECEECCSSC---CHHH--HHHHHHHHHHHHHHHHHHHTC----
T ss_pred EEEEECCCCCC---CHHH--HHHHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 99996699987---7899--9988789999999999999853511
No 4
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=1.00 E-value=1 Score=263.49 Aligned_cols=182 Identities=18% Similarity=0.275 Sum_probs=160.0
Q ss_pred CCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEE
Q ss_conf 89989999809989999814888996508999994055899999998657975524336888745999865192679999
Q 004653 205 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYG 284 (739)
Q Consensus 205 ~sgWkl~~~~nGVrIy~~~~~~~~~~~~~~Ka~gvVdaspe~VFe~L~d~~~~~R~eWD~~~~e~eVIE~IDe~tDIiY~ 284 (739)
.++|++.++++|++||++... .+.+..+|++++|+++|+++|++++|... |++||+++.++++||++|++++|+|+
T Consensus 42 ~~~W~~~~~~~gv~vy~~~~~--~~~~~~~k~~~~v~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~id~~~~I~y~ 117 (224)
T 1jss_A 42 EDEWRVAKKAKDVTVWRKPSE--EFNGYLYKAQGVMDDVVNNVIDHIRPGPW--RLDWDRLMTSLDVLEHFEENCCVMRY 117 (224)
T ss_dssp GGGCEEEEEETTEEEEEEECS--SSSSEEEEEEEEESSCHHHHHHHHSSSTT--HHHHCSSEEEEEEEEECSTTEEEEEE
T ss_pred CCCCEEEEECCCEEEEEEECC--CCCCEEEEEEEEEECCHHHHHHHHHCCCC--CCCCCCCEEEEEEEEECCCCEEEEEE
T ss_conf 799999997898899998426--89865999999991899999999867454--13415200268999984898599999
Q ss_pred EECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEEEEE
Q ss_conf 95377778898897189999899837980999984046899999999166998242589984199999999900999997
Q 004653 285 TYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQML 364 (739)
Q Consensus 285 ~~kp~~lP~~vspRDFV~LRswRr~~DGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~s~VT~I~ 364 (739)
++++.+ ++++++||||++|+|++.+|| |+++++||+||.+| +|||||+++++||+|+|+++ ++++|+|||++
T Consensus 118 ~~~~~~-~~~v~~RDfv~~r~~~~~~~~-~vi~~~Sv~hp~~~--~g~VR~~~~~~g~~i~p~~~----~~~~t~vt~~~ 189 (224)
T 1jss_A 118 TTAGQL-LNIISPREFVDFSYTVGYEEG-LLSCGVSVEWSETR--PEFVRGYNHPCGWFCVPLKD----SPSQSLLTGYI 189 (224)
T ss_dssp EECCBT-TTTBCCEEEEEEEEEEEETTE-EEEEEEECCCCCCC--TTSEECEECSEEEEEEEETT----EEEEEEEEEEE
T ss_pred ECCCCC-CCCCCCCEEEEEEEEEECCCE-EEEEEEEEECCCCC--CCCEEEEECCCEEEEEECCC----CCCCEEEEEEE
T ss_conf 815656-787899848999999986990-99999635569899--99789970255899997589----99955999999
Q ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 462588644434765420032589999999999977521
Q 004653 365 EIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGA 403 (739)
Q Consensus 365 qvDlKGwl~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a 403 (739)
|+|||||+ |.|. +...+...|+.++.+||+.++.
T Consensus 190 ~~Dp~G~i---P~~l--vn~~~~~~~~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 190 QTDLRGMI---PQSA--VDTAMASTLANFYSDLRKGLRK 223 (224)
T ss_dssp CEECCSCC---CHHH--HHHHHHHHHHHHHHHHHHHTC-
T ss_pred EECCCCCC---CHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86789876---1999--9998777599999999999850
No 5
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=262.01 Aligned_cols=186 Identities=21% Similarity=0.208 Sum_probs=163.2
Q ss_pred CCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHH--HCCCCCCCCCCCCCCCCEEEEEEECCCEEEE
Q ss_conf 89989999809989999814888996508999994055899999998--6579755243368887459998651926799
Q 004653 205 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVV--LNLERHQRYEWDMLTGDLELVDSYDGHYDVV 282 (739)
Q Consensus 205 ~sgWkl~~~~nGVrIy~~~~~~~~~~~~~~Ka~gvVdaspe~VFe~L--~d~~~~~R~eWD~~~~e~eVIE~IDe~tDIi 282 (739)
+.+|++..+++|++||++..+ .+.+.++|++++|+++|+++|++| +|.+. |++||.++.++++|+++|++++|+
T Consensus 42 ~~~W~~~~~~~gv~v~~~~~~--~~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~--r~~Wd~~~~~~~vle~i~~~~~i~ 117 (231)
T 2r55_A 42 TAGWKICREGNGVSVSWRPSV--EFPGNLYRGEGIVYGTLEEVWDCVKPAVGGL--RVKWDENVTGFEIIQSITDTLCVS 117 (231)
T ss_dssp CSSCEEEECCSSEEEEEEECS--SSSSEEEEEEEEESSCHHHHHHHHCC--CCS--HHHHCTTCSEEEEEEECSSSEEEE
T ss_pred CCCCEEEEECCCEEEEEECCC--CCCCCEEEEEEEECCCHHHHHHHHHHHCCCH--HHHHCCCCCEEEEEEECCCCEEEE
T ss_conf 999989883798799998257--7998489999998899999999987619414--544444653059999818987999
Q ss_pred EEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEEE
Q ss_conf 99953777788988971899998998379809999840468999999991669982425899841999999999009999
Q 004653 283 YGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQ 362 (739)
Q Consensus 283 Y~~~kp~~lP~~vspRDFV~LRswRr~~DGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~s~VT~ 362 (739)
|+...+ ++++++++||||++|+|++.++|+|+|+.+||+||.+||++|||||++.++||+|+|++++ +++|+|||
T Consensus 118 ~~~~~~-~~~~~v~~RDfv~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~----~~~t~vt~ 192 (231)
T 2r55_A 118 RTSTPS-AAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGE----PTKTNLVT 192 (231)
T ss_dssp EEECCC-BTTTTBCCEEEEEEEEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC------CCCEEEEE
T ss_pred EEEECC-CCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCC----CCCEEEEE
T ss_conf 998356-5689657876799999999399989999986568889999997879987238999983799----98189999
Q ss_pred EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 974625886444347654200325899999999999775219
Q 004653 363 MLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGAN 404 (739)
Q Consensus 363 I~qvDlKGwl~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~ 404 (739)
+.++||+||+ |.|. +...+...|+..+++||+.++.-
T Consensus 193 ~~~~Dp~G~i---P~~l--vn~~~~~~~~~~~~~Lr~~~~~~ 229 (231)
T 2r55_A 193 FFHTDLSGYL---PQNV--VDSFFPRSMTRFYANLQKAVKQF 229 (231)
T ss_dssp EECEECCSSC---CHHH--HHHHHHHHHHHHHHHHHHHHHGG
T ss_pred EEEECCCCCC---CHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9982789876---3999--99887675999999999999870
No 6
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=1.00 E-value=1 Score=258.78 Aligned_cols=186 Identities=18% Similarity=0.238 Sum_probs=160.1
Q ss_pred CCCCCEEEEEE-CCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHH-HHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEE
Q ss_conf 38998999980-9989999814888996508999994055899999-998657975524336888745999865192679
Q 004653 204 EAHEWKCVRTL-NGVRIFEDVADSKSGRGVLVKAVGVIDASADTVF-EVVLNLERHQRYEWDMLTGDLELVDSYDGHYDV 281 (739)
Q Consensus 204 a~sgWkl~~~~-nGVrIy~~~~~~~~~~~~~~Ka~gvVdaspe~VF-e~L~d~~~~~R~eWD~~~~e~eVIE~IDe~tDI 281 (739)
+.++|++.... ||++||++..+ ..+..+|++++++++|+++| +++.|... |++||+++.++++|+++|++++|
T Consensus 40 ~~~~W~~~~~~~~g~~vy~~~~~---~~g~~~k~~~~v~~~~~~v~~~~~~d~~~--r~~Wd~~~~~~~vle~~~~~t~I 114 (229)
T 1em2_A 40 QEENWKFEKNNEYGDTVYTIEVP---FHGKTFILKTFLPCPAELVYQEVILQPER--MVLWNKTVTACQILQRVEDNTLI 114 (229)
T ss_dssp TGGGCEEEEECTTCCEEEEEEET---TTEEEEEEEEEESSCHHHHHHHTTTCHHH--HTTTCTTEEEEEEEEEETTTEEE
T ss_pred CCCCCEEEEECCCCCEEEEEECC---CCCCEEEEEEEECCCHHHHHHHHHHCCCC--HHHCCCCCCEEEEEEECCCCEEE
T ss_conf 97898797864899789998617---89835999998538899999998848620--11016566127998962898599
Q ss_pred EEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEE
Q ss_conf 99995377778898897189999899837980999984046899999999166998242589984199999999900999
Q 004653 282 VYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVT 361 (739)
Q Consensus 282 iY~~~kp~~lP~~vspRDFV~LRswRr~~DGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~s~VT 361 (739)
+|+..+|. +++++++||||++|+|++.+ +.|+++.+||.||.+||++|||||+++++||+|+|+++ ++++|+||
T Consensus 115 ~~~~~~p~-~~~~~~~RDfv~~r~~~~~~-~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~----~~~~t~vt 188 (229)
T 1em2_A 115 SYDVSAGA-AGGVVSPRDFVNVRRIERRR-DRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSAS----NPRVCTFV 188 (229)
T ss_dssp EEEEECCB-TTTTBCCEEEEEEEEEEECS-SEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSS----CTTCEEEE
T ss_pred EEEEECCC-CCCCCCCCEEEEEEEEEECC-CEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCC----CCCCEEEE
T ss_conf 99986676-78876897069999999749-97999973235888899999886660231899995599----99968999
Q ss_pred EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99746258864443476542003258999999999997752199
Q 004653 362 QMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 405 (739)
Q Consensus 362 ~I~qvDlKGwl~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~~ 405 (739)
|++++||+||+ |.|. +...+...|+.++.+||++++...
T Consensus 189 ~~~~~Dp~G~i---P~~l--~n~~~~~~~~~~~~~Lr~~~~~~~ 227 (229)
T 1em2_A 189 WILNTDLKGRL---PRYL--IHQSLAATMFEFAFHLRQRISELG 227 (229)
T ss_dssp EEECEECCSSS---CHHH--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCC---CHHH--HHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99997789987---8999--998877889999999999999850
No 7
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=1.00 E-value=1 Score=231.75 Aligned_cols=193 Identities=15% Similarity=0.249 Sum_probs=154.2
Q ss_pred CCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEC-CCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCE
Q ss_conf 41138998999980998999981488899650899999405-58999999986579755243368887459998651926
Q 004653 201 DAIEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVID-ASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY 279 (739)
Q Consensus 201 ~~~a~sgWkl~~~~nGVrIy~~~~~~~~~~~~~~Ka~gvVd-aspe~VFe~L~d~~~~~R~eWD~~~~e~eVIE~IDe~t 279 (739)
.+.+..+|+++.+++|++||++..+..+..-+.+|+.+++. ++|+++|++++|.+. |++||+++.++++||++|+++
T Consensus 42 ~~~~~~~W~~~~~~~gv~vy~~~~~~~g~~~~~~K~~~~~~~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~i~~~~ 119 (255)
T 2e3n_A 42 DVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDV--RNDWETTIENFHVVETLADNA 119 (255)
T ss_dssp CCTTCTTEEEEEEETTEEEEEECCEETTEECCCEEEEEEEETCCHHHHHHHHHCGGG--HHHHCCSEEEEEEEEEEETTE
T ss_pred HCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCH--HHHHHHHCCEEEEEEECCCCC
T ss_conf 237899958999689879999776999831012799999868999999999829531--754654315068999948997
Q ss_pred EEEEEEECCCCCCCCCCCCEEEEEEEEEEC----CC--CEEEEEEEECCCCCCCCCCCEEEEE---ECCEEEEEEECCCC
Q ss_conf 799999537777889889718999989983----79--8099998404689999999916699---82425899841999
Q 004653 280 DVVYGTYDPKYLTRWQSKRDFVFSRQWFRG----QD--GTYTILQFPAVHKKRPPKSGYRRTK---INPSTWEIRSLNLP 350 (739)
Q Consensus 280 DIiY~~~kp~~lP~~vspRDFV~LRswRr~----~D--GsYVIa~~SV~Hp~~Pp~~GyVRAe---i~~sGylI~P~~~~ 350 (739)
+|+|++++.. +++++||||++|+|++. ++ +.|+++.+|+.||.+|+++|+|||+ .+++||+|+|..+.
T Consensus 120 ~i~y~~~~~p---~p~s~RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~ 196 (255)
T 2e3n_A 120 IIIYQTHKRV---WPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGN 196 (255)
T ss_dssp EEEEEEECCC---TTSCCEEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CC
T ss_pred EEEEEEEECC---CCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCC
T ss_conf 8999995268---8758851499999995266556899889999864579988888997899988321332685047887
Q ss_pred C--CCCCCCEEEEEEEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9--9999900999997462588644434765-4200325899999999999775219
Q 004653 351 M--GSNGAKCLVTQMLEIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGAN 404 (739)
Q Consensus 351 ~--~~~~~~s~VT~I~qvDlKGwl~w~p~~~-s~~~~~i~~~mL~~Va~LRe~~~a~ 404 (739)
- ..++++|+|||++++||+||+ |.|. +.+.+. .+...+.+||+++..+
T Consensus 197 ~~l~~~~~~t~vt~~~~~Dp~G~i---P~~lvn~~~~~---~~~~~l~~L~k~v~~~ 247 (255)
T 2e3n_A 197 QEISRDNILCKITYVANVNPGGWA---PASVLRAVAKR---EYPKFLKRFTSYVQEK 247 (255)
T ss_dssp CCCCGGGEEEEEEEEEEEECSSCC---CHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEEEECCCCCC---CHHHHHHHHHC---CCCHHHHHHHHHHHHH
T ss_conf 533568985899999986789756---79999999862---5509999999999986
No 8
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=1.00 E-value=1 Score=225.91 Aligned_cols=179 Identities=15% Similarity=0.170 Sum_probs=153.8
Q ss_pred CCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
Q ss_conf 38998999980998999981488899650899999405589999999865797552433688874599986519267999
Q 004653 204 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVY 283 (739)
Q Consensus 204 a~sgWkl~~~~nGVrIy~~~~~~~~~~~~~~Ka~gvVdaspe~VFe~L~d~~~~~R~eWD~~~~e~eVIE~IDe~tDIiY 283 (739)
++++|++..+++|++||++..+ .+....+|++++|+++|+++|+++.|.+. |++||+.+.++++|++ +++++|+|
T Consensus 1 ~~~~W~~~~~~~gv~v~~~~~~--~~~~~~~k~~~~v~~s~~~v~~~l~D~~~--~~~W~~~~~~~~vle~-~~~~~i~y 75 (189)
T 3qsz_A 1 MQDGWSLAKDAEGIKVYVRNVE--GSPLREFRGEVRLKAAADDVVKVLRDANA--FRQWMPDVAASELLKA-TDTEQYHY 75 (189)
T ss_dssp --CCCEEEEEETTEEEEEECCT--TCSSCEEEEEEEESSCHHHHHHHHHCGGG--GGGTSTTEEEEEEEEE-CSSEEEEE
T ss_pred CCCCCEEEECCCCEEEEEEECC--CCCEEEEEEEEEEECCHHHHHHHHHHHHH--HHHHHHHCCEEEEEEE-CCCCEEEE
T ss_conf 9987789873799899998579--99827999999997999999999976877--6667875488999700-49941999
Q ss_pred EEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf 99537777889889718999989983798099998404689999999916699824258998419999999990099999
Q 004653 284 GTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQM 363 (739)
Q Consensus 284 ~~~kp~~lP~~vspRDFV~LRswRr~~DGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~s~VT~I 363 (739)
+.++.. +++++||||++++|+++.+|.+++...| .|+.+|+++|+||+++..|||+|+| ++ ++|+|+|+
T Consensus 76 ~~~~~p---~p~~~RD~v~~~~~~~~~~g~~~i~~~~-~~~~~P~~~~~VR~~~~~~~~~i~p-~~------~~t~vt~~ 144 (189)
T 3qsz_A 76 LDNSAP---WPVSNRDGVYHFTYEKAGDGAITVRVEA-VPDYLPLRKGKVRIPRAKGQWTLVP-DA------DGVDVTYQ 144 (189)
T ss_dssp EEECCS---SSCCCEEEEEEEEEEECTTSCEEEEEEE-CTTSSCCCTTSEECCCEEEEEEEEE-CS------SSEEEEEE
T ss_pred EEEECC---CCCCCCCEEEEEEEEECCCCEEEEEEEC-CCCCCCCCCCEEEEEEEEEEEEEEE-CC------CEEEEEEE
T ss_conf 992169---8728810699999999899849999872-8976578999598068447899998-99------93999999
Q ss_pred EEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 7462588644434765-4200325899999999999775219
Q 004653 364 LEIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGAN 404 (739)
Q Consensus 364 ~qvDlKGwl~w~p~~~-s~~~~~i~~~mL~~Va~LRe~~~a~ 404 (739)
+++||+||+ |.|. +.+.+ ..+...+.+||+..+.-
T Consensus 145 ~~~dp~G~i---P~~lvn~~~~---~~~~~~l~~L~k~~~~~ 180 (189)
T 3qsz_A 145 MHASPGGSI---PSWLANQTVV---ETPFGTLKALRSHLRQA 180 (189)
T ss_dssp EEECSCSSS---CHHHHHHTTT---HHHHHHHHHHHHHHTC-
T ss_pred EEECCCCCC---CHHHHHHHHH---HHHHHHHHHHHHHHHHC
T ss_conf 994899999---8899989999---87999999999986202
No 9
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=1.00 E-value=1 Score=222.52 Aligned_cols=181 Identities=19% Similarity=0.195 Sum_probs=151.5
Q ss_pred CCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEEE-CCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEE
Q ss_conf 13899899998099899998148889965089999940-55899999998657975524336888745999865192679
Q 004653 203 IEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVI-DASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDV 281 (739)
Q Consensus 203 ~a~sgWkl~~~~nGVrIy~~~~~~~~~~~~~~Ka~gvV-daspe~VFe~L~d~~~~~R~eWD~~~~e~eVIE~IDe~tDI 281 (739)
.+..+|+++.+++|++||++..+ .+..+.+|++++| +++|++++++|+|.+. |++||+.+.++++++. ++ ++|
T Consensus 25 ~~~~~W~~~~~~~~v~v~~~~~~--~~~~~~~k~~~~i~~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~-~~-~~i 98 (214)
T 1ln1_A 25 LAGADWQLLVETSGISIYRLLDK--KTGLYEYKVFGVLEDCSPTLLADIYMDSDY--RKQWDQYVKELYEQEC-NG-ETV 98 (214)
T ss_dssp CTTTTCEEEEEETTEEEEEEEET--TTTEEEEEEEEEETTSCHHHHHHHHHCHHH--HHHHCTTEEEEEEEEE-TT-EEE
T ss_pred CCCCCCEEEEECCCEEEEEECCC--CCCCEEEEEEEEECCCCHHHHHHHHCCHHH--HHHHHHHHHHEEEECC-CC-CEE
T ss_conf 78998689997798599996469--998479999999879999999999819889--9999998852898546-99-889
Q ss_pred EEEEECCCCCCCCCCCCEEEEEEEEEEC-CCC--EEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCE
Q ss_conf 9999537777889889718999989983-798--0999984046899999999166998242589984199999999900
Q 004653 282 VYGTYDPKYLTRWQSKRDFVFSRQWFRG-QDG--TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKC 358 (739)
Q Consensus 282 iY~~~kp~~lP~~vspRDFV~LRswRr~-~DG--sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~s 358 (739)
+|++++.. +++++||||++|+|++. ++| .|+++.+|+.||.+|+++|+||+++..+||+|+|+++ ++|
T Consensus 99 ~~~~~~~p---~p~~~RD~v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~------~~t 169 (214)
T 1ln1_A 99 VYWEVKYP---FPMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGK------KGS 169 (214)
T ss_dssp EEEEECCC---TTSCCEEEEEEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSS------SSE
T ss_pred EEEEEECC---CCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCC------CCE
T ss_conf 99998758---888994289999877405699849999983534899987799589999899999963999------965
Q ss_pred EEEEEEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999997462588644434765-4200325899999999999775219
Q 004653 359 LVTQMLEIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGAN 404 (739)
Q Consensus 359 ~VT~I~qvDlKGwl~w~p~~~-s~~~~~i~~~mL~~Va~LRe~~~a~ 404 (739)
+++|+.++||+||+ |.|. +.+.+.. +...+.+||+....-
T Consensus 170 ~v~~~~~~Dp~G~i---P~~l~n~~~~~~---~~~~l~~l~k~~~~y 210 (214)
T 1ln1_A 170 KVFMYYFDNPGGQI---PSWLINWAAKNG---VPNFLKDMARACQNY 210 (214)
T ss_dssp EEEEEEEECCSSCC---CHHHHHHHHHTH---HHHHHHHHHHHHHTC
T ss_pred EEEEEEEECCCCCC---CHHHHHHHHHHH---HHHHHHHHHHHHHHC
T ss_conf 99999997899822---389999999877---589999999999726
No 10
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=1.00 E-value=1 Score=64.03 Aligned_cols=81 Identities=12% Similarity=0.145 Sum_probs=62.6
Q ss_pred CCCCEEEEEECCCCCCCCC-------------CCCCCCCCCCEEEEECCCEEEECCEEEEEEEEECCCCCCCCEECCCCH
Q ss_conf 7652149997188543223-------------331221167325752342255074399999982367576301001598
Q 004653 46 ANMSRCISVILMKIPALYK-------------PIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNRLDESKKGEIACATA 112 (739)
Q Consensus 46 ~~~~~~~~vl~~~~~~~y~-------------pir~~~i~~~~~v~d~gr~~~~~~~~~v~~~yn~~~~~~~~~~~a~~~ 112 (739)
-+.-++||||.++.|.||. +...|+||-+..+.+...+.. ..--|+|.|++...+++...|+|.|.
T Consensus 26 k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~-~~k~~~F~I~~~~~~~~~~~~~A~s~ 104 (124)
T 2w2x_D 26 QKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGK-NQKSFVFILEPKQQGDPPVEFATDKV 104 (124)
T ss_dssp TEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCB-TTBSEEEEEEECC--CCCEEEEECCC
T ss_pred CCCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCC-CCCCEEEEEECCCCCCCEEEEEECCH
T ss_conf 98567699997999999803545555655567765308977878899725776-78987999978989973699997999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 899999999999999
Q 004653 113 GEARKWMEAFDQAKQ 127 (739)
Q Consensus 113 eea~~W~~~~~~a~~ 127 (739)
||+..||+||+.|+.
T Consensus 105 ee~~~Wi~ai~~a~~ 119 (124)
T 2w2x_D 105 EELFEWFQSIREITW 119 (124)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999998
Done!