Query 004660
Match_columns 739
No_of_seqs 409 out of 2883
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 18:31:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004660.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1957-1961//hhsearch_pdb/004660hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 476.3 22.1 264 351-624 31-303 (311)
2 4fih_A Serine/threonine-protei 1.0 1 1 472.0 23.9 256 350-619 72-331 (346)
3 4fie_A Serine/threonine-protei 1.0 1 1 471.9 28.0 256 350-619 149-408 (423)
4 4b9d_A Serine/threonine-protei 1.0 1 1 471.5 24.5 258 351-618 23-283 (350)
5 3ubd_A Ribosomal protein S6 ki 1.0 1 1 461.1 18.1 261 351-622 23-292 (304)
6 3hyh_A Carbon catabolite-derep 1.0 1 1 460.4 23.3 257 351-617 12-268 (275)
7 3v5w_A G-protein coupled recep 1.0 1 1 458.9 22.7 267 349-623 186-461 (689)
8 3uto_A Twitchin; kinase, muscl 1.0 1 1 454.1 27.1 260 351-622 156-421 (573)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 448.2 23.4 251 350-618 56-329 (336)
10 4b99_A Mitogen-activated prote 1.0 1 1 447.0 27.3 259 350-619 52-352 (398)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=476.26 Aligned_cols=264 Identities=26% Similarity=0.500 Sum_probs=236.8
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEEE
Q ss_conf 99906813881249769999999799947999996318999550999999999999994169987575146212155589
Q 004660 351 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 430 (739)
Q Consensus 351 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~~l~ 430 (739)
.++|+++++||+|+||+||+|+++.+++.||||++..... ......+.+.+|+++|+.|+|||||+++++|++++.+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~y 108 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY 108 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC--CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 5236898898316484999999999998999999888887--79789999999999998679989891999997389899
Q ss_pred EEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCC--
Q ss_conf 999522798700243201466307889887775799999977299240447776648668993899302630101375--
Q 004660 431 IYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGL-- 508 (739)
Q Consensus 431 LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g~vKL~DFGLA~~~~~~-- 508 (739)
||||||.||+|.+++.+. +.++|..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+...
T Consensus 109 ivmEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 109 FGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp EEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC
T ss_conf 999648998999999874-9999999999999999999999988782687878996985898889987687502577877
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHH
Q ss_conf -5333457999998769999853039999899310356778999999619999999983689999860599999559999
Q 004660 509 -SYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTPPIPEMLSSE 587 (739)
Q Consensus 509 -~~~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~~~iP~~ls~e 587 (739)
....+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+.+..+.+.+|......+|..++++
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~-------~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~ 260 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTE-------KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK 260 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHH-------SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHH
T ss_pred CCCCCCCCCCCCCCCHHHHCC-------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 654367556803079989768-------9999689899899999999749899899799999999971999999656999
Q ss_pred HHHHHHHHCCCCCCCCCCHHH------HHCCCCCCCCCCCCCC
Q ss_conf 999999940019999999999------9809354345557888
Q 004660 588 GKDFLLRCFLRNPVERPSAVE------LLEHPFIRNANYQNLS 624 (739)
Q Consensus 588 l~dLI~kcL~~DP~kRpTa~e------iLqHpff~~~~~~~~~ 624 (739)
+++||.+||.+||.+|+|+.| +++||||+..+|..+.
T Consensus 261 ~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~ 303 (311)
T 4aw0_A 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 303 (311)
T ss_dssp HHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGG
T ss_pred HHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHC
T ss_conf 9999999762897578096797587798779875898989940
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=472.04 Aligned_cols=256 Identities=35% Similarity=0.580 Sum_probs=228.1
Q ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEE
Q ss_conf 89990681388124976999999979994799999631899955099999999999999416998757514621215558
Q 004660 350 KKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHL 429 (739)
Q Consensus 350 ~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~~l 429 (739)
....|++++.||+|+||+||+|+++.+|+.||||+++...... .+.+.+|+.+|+.++|||||++++++.+++.+
T Consensus 72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~ 146 (346)
T 4fih_A 72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGDEL 146 (346)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-----GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred HHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHH-----HHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 1575387079602728299999998999899999985276568-----99999999999867998999199999989999
Q ss_pred EEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCC-
Q ss_conf 9999522798700243201466307889887775799999977299240447776648668993899302630101375-
Q 004660 430 YIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGL- 508 (739)
Q Consensus 430 ~LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g~vKL~DFGLA~~~~~~- 508 (739)
|||||||+||+|.+++.. ..+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.+...
T Consensus 147 ~ivmEy~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp EEEECCCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred EEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCC
T ss_conf 999969899808999871--898999999999999999999998883556278899788799988990275753667887
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC---CCCCCCC
Q ss_conf 5333457999998769999853039999899310356778999999619999999983689999860599---9995599
Q 004660 509 SYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTP---PIPEMLS 585 (739)
Q Consensus 509 ~~~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~~---~iP~~ls 585 (739)
....+.+||+.|||||++. ...|+.++|||||||+||||++|++||.+.+..+.+..+..... +.+..++
T Consensus 225 ~~~~~~~GTp~YmAPEvl~-------~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s 297 (346)
T 4fih_A 225 PRRKSLVGTPYWMAPELIS-------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS 297 (346)
T ss_dssp CCBCCCCSCGGGCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSC
T ss_pred CCCCCCCCCCCCCCHHHHC-------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 7534656275827999977-------999996899999999999999787998985999999999717999887502299
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 9999999994001999999999998093543455
Q 004660 586 SEGKDFLLRCFLRNPVERPSAVELLEHPFIRNAN 619 (739)
Q Consensus 586 ~el~dLI~kcL~~DP~kRpTa~eiLqHpff~~~~ 619 (739)
+++++||.+||.+||++|+|+.|+|+||||+...
T Consensus 298 ~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 298 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 9999999998679956890999996098656899
No 3
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=471.88 Aligned_cols=256 Identities=34% Similarity=0.567 Sum_probs=228.3
Q ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEE
Q ss_conf 89990681388124976999999979994799999631899955099999999999999416998757514621215558
Q 004660 350 KKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHL 429 (739)
Q Consensus 350 ~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~~l 429 (739)
..+.|++++.||+|+||+||+|+++.+|+.||||++....... .+.+.+|+.+|+.|+|||||+++++|.+++.+
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~ 223 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGDEL 223 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-----GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred HHHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHH-----HHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 2684386169624818489999999999899999986255468-----99999999999857998987168999989999
Q ss_pred EEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCC-
Q ss_conf 9999522798700243201466307889887775799999977299240447776648668993899302630101375-
Q 004660 430 YIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGL- 508 (739)
Q Consensus 430 ~LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g~vKL~DFGLA~~~~~~- 508 (739)
|||||||+||+|.+++.. ..+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.+...
T Consensus 224 ~iVmEy~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp EEEEECCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred EEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCC
T ss_conf 999969899828988761--698999999999999999999998890446578777898589998980372654777887
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC---CCCCCCCC
Q ss_conf 533345799999876999985303999989931035677899999961999999998368999986059---99995599
Q 004660 509 SYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRT---PPIPEMLS 585 (739)
Q Consensus 509 ~~~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~---~~iP~~ls 585 (739)
....+.+||++|||||++. ...|+.++|||||||+||||++|+.||.+.+..+.+..+.... ...+..++
T Consensus 302 ~~~~~~~GTp~YmAPEvl~-------~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s 374 (423)
T 4fie_A 302 PRRKSLVGTPYWMAPELIS-------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS 374 (423)
T ss_dssp CCBCCCEECTTTCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSC
T ss_pred CCCCCCCCCCCCCCHHHHC-------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 6434666474727999977-------999996899999999999999787998986999999999727998876501299
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 9999999994001999999999998093543455
Q 004660 586 SEGKDFLLRCFLRNPVERPSAVELLEHPFIRNAN 619 (739)
Q Consensus 586 ~el~dLI~kcL~~DP~kRpTa~eiLqHpff~~~~ 619 (739)
+++++||.+||.+||++|+|+.|+|+||||+...
T Consensus 375 ~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 375 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 9999999998678956890999996098756899
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=471.51 Aligned_cols=258 Identities=29% Similarity=0.506 Sum_probs=231.4
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEEE
Q ss_conf 99906813881249769999999799947999996318999550999999999999994169987575146212155589
Q 004660 351 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 430 (739)
Q Consensus 351 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~~l~ 430 (739)
.++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.|+|||||++++++.+++.+|
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~y 99 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM---SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC---CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEE
T ss_conf 1255884797027793999999889998999999865878---9799999999999998779989891999999899999
Q ss_pred EEEEECCCCCCCHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCCC
Q ss_conf 999522798700243201-4663078898877757999999772992404477766486689938993026301013755
Q 004660 431 IYLEYVHPGSINRYVREH-CRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGLS 509 (739)
Q Consensus 431 LVmEy~~gGsL~~~L~~~-~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g~vKL~DFGLA~~~~~~~ 509 (739)
||||||+||+|.++|... ...++|..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.+....
T Consensus 100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCCC
T ss_conf 99948899839999997389999789999999999999999998991513597899798789998976465214406885
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCHH
Q ss_conf -33345799999876999985303999989931035677899999961999999998368999986059-9999559999
Q 004660 510 -YELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRT-PPIPEMLSSE 587 (739)
Q Consensus 510 -~~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~-~~iP~~ls~e 587 (739)
...+.+||+.|||||++. +..|+.++|||||||+||||++|+.||.+.+..+.+.++.... ++++..++.+
T Consensus 180 ~~~~~~~GT~~YmAPE~l~-------~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~ 252 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICE-------NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYD 252 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHT-------TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHH
T ss_pred CCCCCCCCCCCCCCHHHHC-------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 4101457883603999987-------999895999999999999999787998996999999999808999997557999
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 9999999400199999999999809354345
Q 004660 588 GKDFLLRCFLRNPVERPSAVELLEHPFIRNA 618 (739)
Q Consensus 588 l~dLI~kcL~~DP~kRpTa~eiLqHpff~~~ 618 (739)
+++||.+||.+||++|||+.|+|+||||+..
T Consensus 253 ~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 253 LRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 9999999855896679089999639976167
No 5
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=461.08 Aligned_cols=261 Identities=28% Similarity=0.448 Sum_probs=231.7
Q ss_pred CCCCEEEEEEEECCCEEEEEEEEC---CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECC
Q ss_conf 999068138812497699999997---99947999996318999550999999999999994169987575146212155
Q 004660 351 KSQWQKGKLIGRGTFGSVYIGTNR---ETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDD 427 (739)
Q Consensus 351 ~~~Y~i~k~LG~GsfG~Vy~a~~k---~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~ 427 (739)
.++|++++.||+|+||+||+|++. .+++.||||+++........ ..++.+|+.+|+.++|||||++++++.+++
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~---~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD---RVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE---CC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHH---HHHHHHHHHHHHHCCCCCCCEEEEEEEECC
T ss_conf 55658988972188839999998558878979999998157768478---999999999998779979990999999899
Q ss_pred EEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCC
Q ss_conf 58999952279870024320146630788988777579999997729924044777664866899389930263010137
Q 004660 428 HLYIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTG 507 (739)
Q Consensus 428 ~l~LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g~vKL~DFGLA~~~~~ 507 (739)
.+|||||||+||+|.+++.+. +.+++.+++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCC
T ss_conf 999999757998889999755-9999999999999999999999977995888878995786899887623663433268
Q ss_pred -CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCH
Q ss_conf -5533345799999876999985303999989931035677899999961999999998368999986059999955999
Q 004660 508 -LSYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTPPIPEMLSS 586 (739)
Q Consensus 508 -~~~~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~~~iP~~ls~ 586 (739)
.....+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+.+..+.+..+......+|..+++
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~-------~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~ 251 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNR-------RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 251 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHT-------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCH
T ss_pred CCCCCCCCCCCCCCCCHHHHCC-------CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCH
T ss_conf 8763045441815079999656-------887877763611999999985989989849999999997189999876899
Q ss_pred HHHHHHHHHCCCCCCCCCC-----HHHHHCCCCCCCCCCCC
Q ss_conf 9999999940019999999-----99998093543455578
Q 004660 587 EGKDFLLRCFLRNPVERPS-----AVELLEHPFIRNANYQN 622 (739)
Q Consensus 587 el~dLI~kcL~~DP~kRpT-----a~eiLqHpff~~~~~~~ 622 (739)
++++||.+||.+||++|+| ++|+++||||+..+|..
T Consensus 252 ~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~ 292 (304)
T 3ubd_A 252 EAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNK 292 (304)
T ss_dssp HHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHH
T ss_pred HHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHH
T ss_conf 99999999864698787999867899997690403789999
No 6
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=460.41 Aligned_cols=257 Identities=28% Similarity=0.486 Sum_probs=232.9
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEEE
Q ss_conf 99906813881249769999999799947999996318999550999999999999994169987575146212155589
Q 004660 351 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 430 (739)
Q Consensus 351 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~~l~ 430 (739)
.++|++++.||+|+||+||+|+++.+|+.||||++..... ........+.+|+.+|+.++|||||++++++.+++.+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ 89 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL--AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII 89 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred EECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC--CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 3386899998217681999999999998999999837886--78789999999999998779989992999999899899
Q ss_pred EEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCCCC
Q ss_conf 99952279870024320146630788988777579999997729924044777664866899389930263010137553
Q 004660 431 IYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGLSY 510 (739)
Q Consensus 431 LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g~vKL~DFGLA~~~~~~~~ 510 (739)
|||||| +|+|.+++.+. +.+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus 90 ivmEy~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 90 MVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EEEECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EEEECC-CCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC
T ss_conf 999278-99789999874-9999999999999999999999988930666875876887999899945477726678874
Q ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 33457999998769999853039999899310356778999999619999999983689999860599999559999999
Q 004660 511 ELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTPPIPEMLSSEGKD 590 (739)
Q Consensus 511 ~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~~~iP~~ls~el~d 590 (739)
..+.+||+.|||||++.+ ..+++.++|||||||++|||++|+.||.+.+..+.+..+......+|..+++++++
T Consensus 168 ~~~~~GT~~Y~APE~~~~------~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISG------KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSS------SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHH
T ss_pred CCCEEECCCCCCHHHHCC------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 677028935277455068------98889836568789999999988799899899999999974999998779999999
Q ss_pred HHHHHCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 999940019999999999980935434
Q 004660 591 FLLRCFLRNPVERPSAVELLEHPFIRN 617 (739)
Q Consensus 591 LI~kcL~~DP~kRpTa~eiLqHpff~~ 617 (739)
||.+||..||++|||+.|+|+||||+.
T Consensus 242 li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred HHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 999986589668919999971920065
No 7
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=458.91 Aligned_cols=267 Identities=25% Similarity=0.383 Sum_probs=230.1
Q ss_pred CCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCC-CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECC
Q ss_conf 7899906813881249769999999799947999996318999-550999999999999994169987575146212155
Q 004660 349 PKKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDD-PKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDD 427 (739)
Q Consensus 349 ~~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~-~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~ 427 (739)
...++|+++++||+|+||+||+|+++.+|+.||||++...... ............++.+++.++|||||+++++|.+++
T Consensus 186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~ 265 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 265 (689)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC
T ss_conf 95689288889831648399999999999899999975788252556899999999999996489998717999999899
Q ss_pred EEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCC
Q ss_conf 58999952279870024320146630788988777579999997729924044777664866899389930263010137
Q 004660 428 HLYIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTG 507 (739)
Q Consensus 428 ~l~LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g~vKL~DFGLA~~~~~ 507 (739)
.+|||||||.||+|.++|.+. +.+++..++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+.+..
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECCC
T ss_conf 889999468998299999866-9999999999999999999999978854168866875980899889645655666378
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC---CHHHHHHHHHCCCCCCCCC
Q ss_conf 5533345799999876999985303999989931035677899999961999999998---3689999860599999559
Q 004660 508 LSYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFE---GPQAMFKVLNRTPPIPEML 584 (739)
Q Consensus 508 ~~~~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~---~~~~~~~i~~~~~~iP~~l 584 (739)
. ...+.+||+.|||||++.+ +..|+.++|||||||+||||++|++||.+.. ..+....+......+|..+
T Consensus 345 ~-~~~t~~GTp~YmAPEvl~~------~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~ 417 (689)
T 3v5w_A 345 K-KPHASVGTHGYMAPEVLQK------GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417 (689)
T ss_dssp C-CCCSCCSCGGGCCHHHHST------TCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTS
T ss_pred C-CCCCCCCCCCCCCHHHHHC------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9-8777657867318899847------99999599999999999999868799999986779999985057988887669
Q ss_pred CHHHHHHHHHHCCCCCCCCCC-----HHHHHCCCCCCCCCCCCC
Q ss_conf 999999999940019999999-----999980935434555788
Q 004660 585 SSEGKDFLLRCFLRNPVERPS-----AVELLEHPFIRNANYQNL 623 (739)
Q Consensus 585 s~el~dLI~kcL~~DP~kRpT-----a~eiLqHpff~~~~~~~~ 623 (739)
++++++||.+||.+||.+|++ +.|+++||||+..+|..+
T Consensus 418 S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l 461 (689)
T 3v5w_A 418 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV 461 (689)
T ss_dssp CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHH
T ss_pred CHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHH
T ss_conf 99999999997608986879998889999966915047898899
No 8
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=454.07 Aligned_cols=260 Identities=25% Similarity=0.416 Sum_probs=233.3
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEEE
Q ss_conf 99906813881249769999999799947999996318999550999999999999994169987575146212155589
Q 004660 351 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 430 (739)
Q Consensus 351 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~~l~ 430 (739)
.++|++++.||+|+||+||+|+++.+|+.||+|++... .......+.+|+.+|+.|+|||||+++++|.+++.+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP-----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE
T ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECC-----CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 53618988996164849999999889989999999152-----4205999999999998689989894999999899889
Q ss_pred EEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCC--CCEEEEECCCCHHCCCC
Q ss_conf 9995227987002432014663078898877757999999772992404477766486689--93899302630101375
Q 004660 431 IYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDAS--GVVKLADFGMAKHLTGL 508 (739)
Q Consensus 431 LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~--g~vKL~DFGLA~~~~~~ 508 (739)
||||||.||+|.++|......+++.+++.|+.||+.||.|||++||+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECCCC
T ss_conf 99860699959999998679999999999999999999999988923056876551214788897899406630685699
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC----CCC
Q ss_conf 5333457999998769999853039999899310356778999999619999999983689999860599999----559
Q 004660 509 SYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTPPIP----EML 584 (739)
Q Consensus 509 ~~~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~~~iP----~~l 584 (739)
....+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+.+..+.+..+......++ ..+
T Consensus 311 ~~~~~~~GT~~y~APEv~~~-------~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 383 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEG-------KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 383 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTT-------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTS
T ss_pred CCEEEEEECCCCCCHHHHCC-------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 82323477945149999689-------99896999999999999999787997986999999999848999895324689
Q ss_pred CHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 99999999994001999999999998093543455578
Q 004660 585 SSEGKDFLLRCFLRNPVERPSAVELLEHPFIRNANYQN 622 (739)
Q Consensus 585 s~el~dLI~kcL~~DP~kRpTa~eiLqHpff~~~~~~~ 622 (739)
+.++++||.+||..||.+|+|+.|+|+||||+...+..
T Consensus 384 s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~ 421 (573)
T 3uto_A 384 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 421 (573)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred CHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCC
T ss_conf 99999999988648956892999995395748798987
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=448.15 Aligned_cols=251 Identities=28% Similarity=0.472 Sum_probs=220.6
Q ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCEE
Q ss_conf 89990681388124976999999979994799999631899955099999999999999416998757514621215558
Q 004660 350 KKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHL 429 (739)
Q Consensus 350 ~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~~~~l 429 (739)
....|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.+|+.|+|||||++++++.+++.+
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~~~ 125 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGPWV 125 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETTEE
T ss_pred CHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH----------HHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 53351768685138780999999889998999999788886----------99999999857998999399999989999
Q ss_pred EEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCC-CEEEEECCCCHHCCCC
Q ss_conf 999952279870024320146630788988777579999997729924044777664866899-3899302630101375
Q 004660 430 YIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASG-VVKLADFGMAKHLTGL 508 (739)
Q Consensus 430 ~LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g-~vKL~DFGLA~~~~~~ 508 (739)
|||||||+||+|.+++++. +.+++..++.|+.||+.||.|||++||+||||||+||||+.+| .+||+|||+|+.+...
T Consensus 126 ~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp EEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred EEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCC
T ss_conf 9999665998699999876-999999999999999999999998890426167788799589997999627877685678
Q ss_pred CC------CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC---C
Q ss_conf 53------33457999998769999853039999899310356778999999619999999983689999860599---9
Q 004660 509 SY------ELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTP---P 579 (739)
Q Consensus 509 ~~------~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~~---~ 579 (739)
.. ..+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+....+.+.++....+ .
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~-------~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 277 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMG-------KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIRE 277 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTT-------CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGG
T ss_pred CCCCCEECCCCCCCCCCCCCHHHHCC-------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHH
T ss_conf 76540221785455802008999889-------99890899999999999999786998998999999999808998002
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH-------------CCCCCCCC
Q ss_conf 9955999999999994001999999999998-------------09354345
Q 004660 580 IPEMLSSEGKDFLLRCFLRNPVERPSAVELL-------------EHPFIRNA 618 (739)
Q Consensus 580 iP~~ls~el~dLI~kcL~~DP~kRpTa~eiL-------------qHpff~~~ 618 (739)
+|..+++++++||.+||.+||.+|||+.|++ +|||+...
T Consensus 278 ~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 278 IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 5866799999999997628976895999999999999754432169876777
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=447.00 Aligned_cols=259 Identities=27% Similarity=0.414 Sum_probs=221.8
Q ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEE----
Q ss_conf 8999068138812497699999997999479999963189995509999999999999941699875751462121----
Q 004660 350 KKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVV---- 425 (739)
Q Consensus 350 ~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~~~~l~~Ei~iL~~L~HPNIVkl~~~~~~---- 425 (739)
..++|++++.||+|+||+||+|+++.+|+.||||+++... ......+.+.+|+++|+.|+|||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 128 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF---DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY 128 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC---CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
T ss_conf 7897489889842608499999998999899999987400---3468899999999999866799954176555203554
Q ss_pred --CCEEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCH
Q ss_conf --555899995227987002432014663078898877757999999772992404477766486689938993026301
Q 004660 426 --DDHLYIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAK 503 (739)
Q Consensus 426 --~~~l~LVmEy~~gGsL~~~L~~~~~~Lse~~i~~i~~QIl~gL~yLHs~GIvHRDIKPeNILId~~g~vKL~DFGLA~ 503 (739)
.+.+|||||||+ |+|.+++... +.+++..++.|++||+.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus 129 ~~~~~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 129 GEFKSVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred CCCCEEEEEEECCC-CCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEE
T ss_conf 66887999983799-9889999865-999999999999999999999998867678737133542788877872214342
Q ss_pred HCCCC-----CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 01375-----5333457999998769999853039999899310356778999999619999999983689999860599
Q 004660 504 HLTGL-----SYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTP 578 (739)
Q Consensus 504 ~~~~~-----~~~~s~~GT~~Y~APEiL~~~~~~~g~~~~t~asDVWSLGvILyELLtGk~PF~~~~~~~~~~~i~~~~~ 578 (739)
.+... ....+.+||++|||||++.+ ..+|+.++||||+||++|||++|++||.+.+..+.+..|+....
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~------~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g 280 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLS------LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTT------CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHC
T ss_pred ECCCCCCCCCCCCCCCEECHHHCCHHHHCC------CCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 134675456666566255867648787627------88899722211168999999978899898898999999997038
Q ss_pred CC-------------------------------CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 99-------------------------------955999999999994001999999999998093543455
Q 004660 579 PI-------------------------------PEMLSSEGKDFLLRCFLRNPVERPSAVELLEHPFIRNAN 619 (739)
Q Consensus 579 ~i-------------------------------P~~ls~el~dLI~kcL~~DP~kRpTa~eiLqHpff~~~~ 619 (739)
.. ...+++++++||.+||..||.+|+|+.|+|+||||+...
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 998677633100234555530787688788985879999999999997749955791899996597238688
Done!