BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004662
(738 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8T1P1|Y3453_DICDI Uncharacterized protein DDB_G0273453/DDB_G0273565 OS=Dictyostelium
discoideum GN=DDB_G0273453 PE=4 SV=2
Length = 839
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 251/433 (57%), Gaps = 55/433 (12%)
Query: 34 RYTRPVLQSTLQLMGCKARHAFKISQRVFKMIRTESPTSAHHQEGAEVFGSHCLKGNLEK 93
RY R L TL+ MGCK+ HA +IS VF+ + + + Q A + ++ K
Sbjct: 124 RYARFHLNLTLKFMGCKSIHARQISNTVFEQLE-KCRIEQNKQLTATNNNAIVTTDSITK 182
Query: 94 DDGCNPGSCFCKEEVSESGDRSKRIPFELYKRRTTVVISRETFIDVVCDALTEYKYVGHN 153
+ + + + + P +Y V I R F ++ L+ Y+Y
Sbjct: 183 TEQSTTTTTTTTTTTTTTTATTTTQP-PIY----CVSIQRNIFYYIIGHILSCYQYSKPQ 237
Query: 154 QRADLVLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFV 213
D ++C ++++K S T+LL GTSGCGKSTL+ALL SR+G T VISTD+IR ++R F+
Sbjct: 238 YIIDFPVSCEVQDKKHSFTILLGGTSGCGKSTLTALLASRIGFTAVISTDNIRQLLRKFI 297
Query: 214 DEKQNPLLWASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIR 273
+++P+LWASTYHAGE + SN S
Sbjct: 298 SRQESPILWASTYHAGEII-----------------------------SNPS-------- 320
Query: 274 PEVGSSAAELISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMG 333
+S K+ ++G++AQ+EM+ + LD LI +E+R ES++VEGVHL ++
Sbjct: 321 ----------LSHKEKILQGYEAQNEMIFNKLDILIGHYEKRKESLIVEGVHLDTKLILR 370
Query: 334 LMKKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRAD 393
L+KKHPS IPF++YI+NE KH ERFA+R+KYMTLDP +NKY KY +NIR I D+LC AD
Sbjct: 371 LVKKHPSCIPFLMYISNEAKHKERFAIRSKYMTLDPHQNKYTKYFKNIRIINDHLCHGAD 430
Query: 394 KHLVPKINNTNVDKSVAAIHATVFSCLRRR-EGGEQLYDPTTNTVTVIAEEYRNQCAAHS 452
+H++P+I+NT++D+S+A IH T+F+CL+R+ + GE Y+ T+ + ++ +Y Q
Sbjct: 431 EHMIPQIDNTSIDRSLATIHGTIFACLKRKVQCGESYYNHETDKMNMLYNQYE-QIQHQF 489
Query: 453 LSSKGMFQLIQRK 465
SSKGM +LIQ+K
Sbjct: 490 WSSKGMLRLIQKK 502
>sp|Q8TGY9|PGK2_METKA 2-phosphoglycerate kinase OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=pgk2 PE=3 SV=1
Length = 327
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 49/261 (18%)
Query: 160 LACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNP 219
L RI++R+E + VL+ G SG G ST+++ +G RLGIT VI TD+IR +MR + E+ P
Sbjct: 102 LWRRIKKREEPIIVLIGGASGVGTSTIASEVGHRLGITNVIGTDAIREVMRRVLAEELYP 161
Query: 220 LLWASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGSS 279
L+ SS T +R E
Sbjct: 162 TLY----------------------------------------ESSYTAWKRLRYEPAED 181
Query: 280 AAELISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLMKKHP 339
I GF SE V+ ++ ++ V+VEGVH+ + + +P
Sbjct: 182 PV---------ITGFLDHSEPVVVGIEGVVNRSINEGIHVIVEGVHIVPRLIKKEILNYP 232
Query: 340 SIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPK 399
++ FM+ + +E+ H RF R++ L +Y+KY IR I D+L + A++H +P
Sbjct: 233 NVFVFMLAVEDEEAHKWRFYARSRDTKLSRPAERYLKYFEEIRRIHDFLVEDAEEHDIPV 292
Query: 400 INNTNVDKSVAAIHATVFSCL 420
INN ++D++V I + + S L
Sbjct: 293 INNEHIDETVDQIVSYISSKL 313
>sp|Q58877|PGK2_METJA 2-phosphoglycerate kinase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pgk2 PE=3 SV=1
Length = 309
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 152 HNQRADLVLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRS 211
+++ A L R+ + + +L+ G SG G ST++ + SRLGI +VI TDSIR +MR
Sbjct: 74 YDEVAKKYLLWRMVLGRRPIVILIGGASGVGTSTIAFEIASRLGIPSVIGTDSIREVMRK 133
Query: 212 FVDEKQNPLLWASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSD 271
+ P L+ S+Y A + L +D+ N
Sbjct: 134 VISRDLIPTLYESSYTAWKVL-------------------------RDDEGNKY------ 162
Query: 272 IRPEVGSSAAELISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFV 331
I+GF+ SE V+ ++ +I +SV++EG HL +
Sbjct: 163 -------------------IKGFERHSEAVLTGVEGVIDRCLVEGQSVIIEGTHLVPTLL 203
Query: 332 MGLMKKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQR 391
++ ++ M+ I NE+ H RF R + ++ P + +Y+KY + IR I DY+ +
Sbjct: 204 KDKYLENSHVVFIMLTIYNEELHKMRFYARGR-VSSRPTE-RYLKYFKIIRMINDYMVET 261
Query: 392 ADKHLVPKINNTNVDKSV 409
A K +P + N + ++V
Sbjct: 262 AKKKGIPVVENIKISETV 279
>sp|A9A9N2|PGK2_METM6 2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=pgk2 PE=3 SV=1
Length = 313
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 54/247 (21%)
Query: 167 RKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTY 226
+K S+ +L+ G+SG G ST++ L SRLGI +VI TDSIR +MR + + P+L+ S+Y
Sbjct: 92 KKHSIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISKDLVPMLYESSY 151
Query: 227 HAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGSSAAELISP 286
A A P DE
Sbjct: 152 TAW---------------------TALRRSPWDEQDT----------------------- 167
Query: 287 KQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLM--KKH--PSII 342
K+M + GF+ E V+ ++ +I SV++EG H+ V GLM K H P++I
Sbjct: 168 KEMHLLGFERHVEPVLLGIESIIDRSLTEGTSVILEGTHI----VPGLMGEKYHSMPNVI 223
Query: 343 PFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPKINN 402
+ +++E+ H +RF RAK D +Y++ I+ I Y+ +++ ++ VP I N
Sbjct: 224 FLNLTLSSEETHKKRFTARAK--VSDRPLERYLENFEIIKEINQYIVEKSKENNVPVIEN 281
Query: 403 TNVDKSV 409
++ ++V
Sbjct: 282 VSISETV 288
>sp|A6UQ76|PGK2_METVS 2-phosphoglycerate kinase OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=pgk2 PE=3 SV=1
Length = 313
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 54/258 (20%)
Query: 156 ADLVLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDE 215
A+ L R +K S+ +L+ G SG G ST++ L SRLGI +VI TDSIR +MR + +
Sbjct: 81 AEKYLLWRRVLKKHSIIILVGGASGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISK 140
Query: 216 KQNPLLWASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPE 275
P+L+ S+Y A KA +H
Sbjct: 141 DLVPMLYESSYTAW-----------KALRH------------------------------ 159
Query: 276 VGSSAAELISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLM 335
S+AE K+M + GF+ E V+ ++ +I SV++EG H+ V GL+
Sbjct: 160 ---SSAEEYDTKEMHLLGFERHVEPVLIGIESIIDRSLTEGMSVILEGTHI----VPGLL 212
Query: 336 --KKHP--SIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQR 391
K H ++I + +++E+ H +RF RAK D +Y+ I+ I +Y+ ++
Sbjct: 213 GEKYHSMQNVIILNLTLSSEEIHKQRFVARAK--VSDRPLERYLSNFEIIKEINEYIVKK 270
Query: 392 ADKHLVPKINNTNVDKSV 409
+ ++ VP I N ++ ++V
Sbjct: 271 SRENKVPVIENVSISETV 288
>sp|Q5JDW9|PGK2_PYRKO 2-phosphoglycerate kinase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pgk2 PE=3 SV=1
Length = 290
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 56/271 (20%)
Query: 151 GHNQRADLVLACR-IRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMM 209
G + A L R +R RK +TVLL G +G GKST++ L RLGI ++I TD+IR +M
Sbjct: 70 GLREEAKRYLFWRELRRRKVRLTVLLGGATGVGKSTIATELAFRLGIRSIIGTDTIREVM 129
Query: 210 RSFVDEKQNPLLWASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGK 269
R + ++ P + S++ LA + PK+
Sbjct: 130 RKIIAKELLPDIHVSSF----------------------LAERVVKAPKN---------- 157
Query: 270 SDIRPEVGSSAAELISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLN 329
SD P I GF+ Q + V + ++ + ++EG+H+
Sbjct: 158 SD--------------P---LIYGFETQVKHVSVGIKAVLERARREGLNTLIEGIHV--- 197
Query: 330 FVMGLMKKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLC 389
V G ++ ++I + +D + F RA+Y D KYVK++ I IQDYL
Sbjct: 198 -VPGFVEPREDEFMYVIAVPKKDYLIAHFYERARYSQRDA--EKYVKHVDRIMRIQDYLV 254
Query: 390 QRADKHLVPKINNTNVDKSVAAIHATVFSCL 420
+RA +H +P I N ++ +V+ I A + L
Sbjct: 255 ERAREHGIPVIENVELESTVSTILADMMKKL 285
>sp|A4FW93|PGK2_METM5 2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pgk2 PE=3 SV=1
Length = 313
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 54/247 (21%)
Query: 167 RKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTY 226
+K S+ +L+ G+SG G ST++ L SRLGI +VI TDSIR +MR + + P+L+ S+Y
Sbjct: 92 KKHSIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISKDLVPMLYESSY 151
Query: 227 HAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGSSAAELISP 286
A A S + D
Sbjct: 152 TAW------------------------------TALRRSQWDEQD--------------T 167
Query: 287 KQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLM----KKHPSII 342
K+M + GF+ E V+ ++ +I SV++EG H+ V GLM + P++I
Sbjct: 168 KEMHLLGFERHVEPVLLGIESIIDRSLTEGTSVIIEGTHI----VPGLMGEKYQSMPNVI 223
Query: 343 PFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPKINN 402
+ +++E+ H +RF RAK D +Y++ I+ I Y+ +++ ++ VP I N
Sbjct: 224 FLNLTLSSEETHKKRFTARAK--VSDRPLERYLENFEIIKEINQYIVEKSKENKVPVIEN 281
Query: 403 TNVDKSV 409
++ ++V
Sbjct: 282 VSISETV 288
>sp|O27911|PGK2_METTH 2-phosphoglycerate kinase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pgk2 PE=3 SV=1
Length = 306
Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 47/254 (18%)
Query: 159 VLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQN 218
+L +IR+ KE + +L+ G SG G S+++ + +RLGI +ISTD IR +MR V +
Sbjct: 80 MLWRKIRQCKEPLIILIGGASGVGTSSIAFEVANRLGIRNMISTDMIREVMRKIVSRELL 139
Query: 219 PLLWASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGS 278
P ++ S+Y A + +L +P PE+
Sbjct: 140 PSIYESSYTAYQ----------------------SLRIPPP--------------PELDE 163
Query: 279 SAAELISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLMKKH 338
+ GF+ E V ++ +I S+V+EGVH+ F+ +
Sbjct: 164 -----------VLIGFRDHVESVSIGVEAVIERALTEGISIVIEGVHIVPGFIREDLVNK 212
Query: 339 PSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVP 398
++ F++ +++E+ H RF R + M +Y+ Y IR I Y+ +A KH VP
Sbjct: 213 ENVAMFVLTVSDENVHKGRFYSRCRQMWARRPLKRYISYFWAIRRIHRYIENQARKHGVP 272
Query: 399 KINNTNVDKSVAAI 412
I N +V ++ +I
Sbjct: 273 VIENIDVVTTIDSI 286
>sp|Q6LXC1|PGK2_METMP 2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain S2 /
LL) GN=pgk2 PE=3 SV=1
Length = 312
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 54/258 (20%)
Query: 156 ADLVLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDE 215
A+ L R +K S+ +L+ G+SG G ST++ L SRLGI +VI TDSIR +MR + +
Sbjct: 80 AEKYLLWRRILKKHSIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISK 139
Query: 216 KQNPLLWASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPE 275
P+L+ S+Y A L + E +
Sbjct: 140 DLVPMLYESSYTAWTALRKSSWEEQDS--------------------------------- 166
Query: 276 VGSSAAELISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLM 335
K+M + GF+ E V+ ++ +I SV++EG H+ V GLM
Sbjct: 167 -----------KEMHLLGFERHVEPVLLGIESIIDRSLTEGTSVIIEGTHI----VPGLM 211
Query: 336 ----KKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQR 391
++ P++I + +++E+ H +RF RAK D +Y++ I+ I Y+ ++
Sbjct: 212 AEKYQEMPNVIFLNLTLSSEETHKKRFIARAK--VSDRPLERYLENFEIIKEINQYIVEK 269
Query: 392 ADKHLVPKINNTNVDKSV 409
+ ++ +P I N ++ +V
Sbjct: 270 SKENNLPVIENVSISDTV 287
>sp|A6VH17|PGK2_METM7 2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=pgk2 PE=3 SV=1
Length = 312
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 54/247 (21%)
Query: 167 RKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTY 226
+K S+ +L+ G+SG G ST++ L SRLGI +VI TDSIR +MR + + P+L+ S+Y
Sbjct: 92 KKHSIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISKDLVPMLYESSY 151
Query: 227 HAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGSSAAELISP 286
A AL + E ++
Sbjct: 152 T----------------------AWTALRRSQWEEQDT---------------------- 167
Query: 287 KQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLM----KKHPSII 342
K M + GF+ E V+ ++ +I SV++EG H+ V GLM + P++I
Sbjct: 168 KGMHLLGFERHVEPVLLGIESIIDRSLTEGTSVIIEGTHI----VPGLMGEKYQSMPNVI 223
Query: 343 PFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPKINN 402
+ +++E+ H +RF RAK D +Y++ I+ I Y+ +++ ++ VP I N
Sbjct: 224 FLNLTLSSEEIHKKRFTARAK--VSDRPLERYLENFEIIKEINQYIVEKSKENNVPVIEN 281
Query: 403 TNVDKSV 409
++ ++V
Sbjct: 282 VSISETV 288
>sp|Q49156|PGK2_METFV 2-phosphoglycerate kinase OS=Methanothermus fervidus (strain ATCC
43054 / DSM 2088 / JCM 10308 / V24 S) GN=pgk2 PE=1 SV=1
Length = 304
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 47/250 (18%)
Query: 163 RIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLW 222
+IRE KE + +L+ G SG G S+++ + +RLGI +ISTD IR +MR + ++ P L
Sbjct: 84 KIREYKEPLILLIAGASGVGTSSIAFEVANRLGIRNMISTDMIREVMRKMISKELIPSLH 143
Query: 223 ASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGSSAAE 282
ST+ A + L A E DE
Sbjct: 144 ESTFTAYKSLRTPAPVEF------------------DEV--------------------- 164
Query: 283 LISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLMKKHPSII 342
+ GF+ +V ++ +I S+V+EG HL F+ + ++
Sbjct: 165 --------LVGFRDHVNVVTVGIEAVIERALTEGISIVIEGAHLVPGFIREELINKNNVA 216
Query: 343 PFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPKINN 402
F++ + +E H RF R + +Y+KY IR I DY+ +A KH +P I N
Sbjct: 217 MFVLTVPDEKMHRSRFYSRCRQKWARRPLERYLKYFWAIRRIHDYIEMQARKHNIPIIEN 276
Query: 403 TNVDKSVAAI 412
+V ++ +I
Sbjct: 277 IDVVTTIDSI 286
>sp|Q8U4K7|PGK2_PYRFU 2-phosphoglycerate kinase OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=pgk2 PE=3 SV=1
Length = 302
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 133/311 (42%), Gaps = 69/311 (22%)
Query: 130 VISRETFIDVVCDALTEYKYVGHNQRADLVLACRIRERKESVTVLLCGTSGCGKSTLSAL 189
V+++E ++ L E + +R + R R+ K + +LL G +G GKST++
Sbjct: 52 VVTKEEIRNITYQKLVEKGFKEEAKR--YLFWRRFRKLKIPLIILLGGPTGVGKSTIATE 109
Query: 190 LGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEFLDPDAVAEAKAKKHARKL 249
L RLGI +VI TD+IR +MR + + P T H FL A K R
Sbjct: 110 LAFRLGIRSVIGTDTIREVMRKIITPELLP-----TIHTSTFL---------AWKELR-- 153
Query: 250 AGAALSVPKDEASNSSATGKSDIRPEVGSSAAELISPKQMAIEGFKAQSEMVIDSLDRLI 309
+ TG SP I GF++Q V ++ +I
Sbjct: 154 --------------GTVTG----------------SP---IIAGFESQVNAVAVGVNAVI 180
Query: 310 TAWEERNESVVVEGVHLSLNFV-----MGLMKKHPSIIPFMIYITNEDKHMERFAVRAKY 364
+ + ++EG+HL F+ M M +MI + ++ RF R +Y
Sbjct: 181 QRAIKEGLNAIIEGIHLVPGFIKIDYEMAFM--------YMIVARSREELEARFYERTRY 232
Query: 365 MTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPKINNTNVDKSVAAIHATVFSC---LR 421
+ Y+ ++ I IQ+YL ++A ++ VP I N ++K+++ I + +
Sbjct: 233 S--KRSAQYYISHLDEIMEIQEYLIKKAREYRVPIIENVELEKTISTIMEDIMEKTVEIM 290
Query: 422 RREGGEQLYDP 432
+++G + L +P
Sbjct: 291 KKKGLDMLEEP 301
>sp|O57882|PGK2_PYRHO 2-phosphoglycerate kinase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pgk2 PE=3 SV=1
Length = 301
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 54/250 (21%)
Query: 163 RIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLW 222
R R+ K + +LL G +G GKST++ L RLGI +VI TDSIR ++R + + P +
Sbjct: 83 RFRKMKVPLIILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKIITPELLPTIH 142
Query: 223 ASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGSSAAE 282
ST+ A ++L G P
Sbjct: 143 TSTFLAW-----------------KELKGTVTDSP------------------------- 160
Query: 283 LISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLMKKHPSII 342
+ GF++Q V ++ +I + ++EG+H+ FV ++ + +
Sbjct: 161 -------IVAGFESQVSAVTVGINAIIERAVREGLNAIIEGIHVVPGFVK--VEGEMTFM 211
Query: 343 PFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPKINN 402
+I + ED RF R +Y + PA + Y+ ++ I IQDYL +RA K VP I N
Sbjct: 212 YMLIARSREDLE-ARFYERTRY-SKRPA-DYYISHLDEILEIQDYLIRRAKKFNVPVIEN 268
Query: 403 TNVDKSVAAI 412
++++V+ I
Sbjct: 269 VELEETVSKI 278
>sp|Q9V2C6|PGK2_PYRAB 2-phosphoglycerate kinase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pgk2 PE=3 SV=1
Length = 302
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 64/255 (25%)
Query: 163 RIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLW 222
R R+ K + +LL G +G GKST++ L RLGI +VI TDSIR ++R + + P
Sbjct: 83 RFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKVITPELLP--- 139
Query: 223 ASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGSSAAE 282
T H FL A E K G+++
Sbjct: 140 --TIHTSTFL---AWKEIK-----------------------------------GTTSG- 158
Query: 283 LISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFV-----MGLMKK 337
SP I GF++Q V ++ +I + + ++EG+H+ FV M M
Sbjct: 159 --SP---IIAGFESQVSAVAVGVNAIIERAKREGLNAIIEGIHVVPGFVDVKGEMTFM-- 211
Query: 338 HPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLV 397
+MI + + RF R +Y + N Y+ ++ I IQ YL +RA K V
Sbjct: 212 ------YMIVARSREDLEARFYERTRYS--KRSANYYISHLDEIMEIQRYLIERARKFGV 263
Query: 398 PKINNTNVDKSVAAI 412
P I N ++K++ AI
Sbjct: 264 PVIENIELEKTIRAI 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 272,386,153
Number of Sequences: 539616
Number of extensions: 11596682
Number of successful extensions: 54814
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 576
Number of HSP's that attempted gapping in prelim test: 44460
Number of HSP's gapped (non-prelim): 4859
length of query: 738
length of database: 191,569,459
effective HSP length: 125
effective length of query: 613
effective length of database: 124,117,459
effective search space: 76084002367
effective search space used: 76084002367
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)