Your job contains 1 sequence.
>004663
MSANGTGCGKEEKGNEDMEEEPAPDVNMSDGETNVDVKDPPFSIPEKNQDDMSSDNIDLQ
TDNNDVMSVGLPSDNNGSVDNQTADDVKVNTNVDRLYGNHKDLKLESVDDEDKDSESVTG
TNAPVDVIAKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVS
ANELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKT
NGSLNQLECATADERPSEVKAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQL
EFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAK
NQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSN
LSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKEDLNLLKLWRAVIK
LGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPLHDGS
LTEPSRIESQAAGSQAFGSGRARRDAAARAMQGWHSKRLLGSGEVCQPIIKEKNSSCTTK
SDRQIKNIGLLKRKKPSTVEHSIQVANVKATNPQLDTMVIDIGPPADWVKINVQRTIDCF
EVYALVPGLLREEVHVQSDPAGRLVISGQPEHMDNPWGVTPFKKVVSLPSRIDPHQTSAV
VTLHGQLFVRVPFEQSDM
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004663
(738 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2827523 - symbol:AT2G17410 species:3702 "Arabi... 1053 1.9e-106 1
TAIR|locus:2037345 - symbol:AT1G20910 species:3702 "Arabi... 937 3.8e-94 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 190 8.2e-11 1
UNIPROTKB|F1SU48 - symbol:ARID5A "Uncharacterized protein... 156 1.2e-07 1
DICTYBASE|DDB_G0291444 - symbol:DDB_G0291444 species:4468... 151 2.6e-07 1
UNIPROTKB|Q3SWY1 - symbol:ARID5A "AT-rich interactive dom... 151 4.2e-07 1
UNIPROTKB|G3MY61 - symbol:ARID5A "AT-rich interactive dom... 151 4.7e-07 1
ZFIN|ZDB-GENE-081028-53 - symbol:ch1073-321c8.1 "ch1073-3... 154 5.4e-07 1
DICTYBASE|DDB_G0293562 - symbol:DDB_G0293562 species:4468... 148 7.4e-07 1
WB|WBGene00000476 - symbol:cfi-1 species:6239 "Caenorhabd... 147 7.8e-07 1
MGI|MGI:2137512 - symbol:Arid4b "AT rich interactive doma... 151 1.2e-06 1
UNIPROTKB|F1LRI4 - symbol:Arid5a "Protein Arid5a" species... 147 1.2e-06 1
UNIPROTKB|F1PXY8 - symbol:ARID5A "Uncharacterized protein... 145 1.9e-06 1
UNIPROTKB|Q4LE39 - symbol:ARID4B "AT-rich interactive dom... 147 3.2e-06 1
DICTYBASE|DDB_G0288285 - symbol:mybX "myb domain-containi... 147 4.1e-06 1
UNIPROTKB|F1SJW1 - symbol:F1SJW1 "Uncharacterized protein... 143 4.5e-06 1
UNIPROTKB|J9JHT7 - symbol:ARID4B "Uncharacterized protein... 145 4.9e-06 1
UNIPROTKB|F1RGW9 - symbol:ARID4B "Uncharacterized protein... 145 5.3e-06 1
UNIPROTKB|F1PYK7 - symbol:ARID4B "Uncharacterized protein... 145 5.3e-06 1
DICTYBASE|DDB_G0302588 - symbol:DDB_G0302588 "RanBP2-type... 149 6.0e-06 1
MGI|MGI:2443039 - symbol:Arid5a "AT rich interactive doma... 140 6.6e-06 1
UNIPROTKB|Q03989 - symbol:ARID5A "AT-rich interactive dom... 140 6.6e-06 1
GENEDB_PFALCIPARUM|PF14_0404 - symbol:PF14_0404 "hypothet... 132 7.0e-06 2
UNIPROTKB|Q8IL45 - symbol:TREP "TRAP-related protein" spe... 132 7.0e-06 2
UNIPROTKB|F1LMH4 - symbol:Arid4b "AT-rich interactive dom... 143 8.1e-06 1
RGD|619919 - symbol:Arid4b "AT rich interactive domain 4B... 143 8.1e-06 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 143 1.2e-05 1
GENEDB_PFALCIPARUM|PFL0465c - symbol:PFL0465c "Zinc finge... 142 1.3e-05 1
UNIPROTKB|Q7KQK4 - symbol:PFL0465c "Zinc finger transcrip... 142 1.3e-05 1
ZFIN|ZDB-GENE-020604-1 - symbol:myhz2 "myosin, heavy poly... 142 1.7e-05 1
TAIR|locus:2037863 - symbol:MBD10 "methyl-CPG-binding dom... 133 1.9e-05 1
GENEDB_PFALCIPARUM|PF14_0201 - symbol:PF14_0201 "surface ... 126 1.9e-05 2
UNIPROTKB|Q8ILP3 - symbol:Pf113 "Surface protein, Pf113" ... 126 1.9e-05 2
UNIPROTKB|H3BQ92 - symbol:ARID3B "AT-rich interactive dom... 111 2.1e-05 1
ZFIN|ZDB-GENE-060531-50 - symbol:myha "myosin, heavy chai... 141 2.2e-05 1
ZFIN|ZDB-GENE-030131-6206 - symbol:myhc4 "myosin heavy ch... 141 2.2e-05 1
UNIPROTKB|F1NIM8 - symbol:F1NIM8 "Uncharacterized protein... 138 2.4e-05 1
UNIPROTKB|F1NK39 - symbol:F1NK39 "Uncharacterized protein... 138 2.7e-05 1
ZFIN|ZDB-GENE-070705-74 - symbol:myhz1.3 "myosin, heavy p... 140 2.9e-05 1
UNIPROTKB|F1MNB5 - symbol:ARID4B "Uncharacterized protein... 138 3.0e-05 1
UNIPROTKB|F1NL47 - symbol:ARID3B "Uncharacterized protein... 119 3.5e-05 3
ZFIN|ZDB-GENE-070705-73 - symbol:myhz1.2 "myosin, heavy p... 139 3.7e-05 1
ZFIN|ZDB-GENE-000322-5 - symbol:myhz1.1 "myosin, heavy po... 139 3.7e-05 1
TAIR|locus:2098443 - symbol:AT3G28770 "AT3G28770" species... 139 4.0e-05 1
UNIPROTKB|E2R9X2 - symbol:ARID5B "AT-rich interactive dom... 136 4.4e-05 1
SGD|S000001800 - symbol:SRP40 "Nucleolar serine-rich prot... 130 4.4e-05 1
UNIPROTKB|J9NV13 - symbol:ARID5B "AT-rich interactive dom... 136 4.5e-05 1
CGD|CAL0002613 - symbol:orf19.808 species:5476 "Candida a... 137 4.5e-05 2
UNIPROTKB|Q5AHI8 - symbol:DEP1 "Putative uncharacterized ... 137 4.5e-05 2
DICTYBASE|DDB_G0281419 - symbol:ncapGa "putative non-SMC ... 136 5.9e-05 1
TAIR|locus:504955937 - symbol:AT2G22795 "AT2G22795" speci... 132 6.5e-05 1
TAIR|locus:2027513 - symbol:AT1G56660 "AT1G56660" species... 130 6.7e-05 1
UNIPROTKB|P12957 - symbol:CALD1 "Caldesmon" species:9031 ... 132 7.0e-05 1
UNIPROTKB|E2RFI5 - symbol:ARID3B "Uncharacterized protein... 129 9.5e-05 1
UNIPROTKB|P82970 - symbol:HMGN5 "High mobility group nucl... 124 9.6e-05 1
UNIPROTKB|G3X7C0 - symbol:SMC1A "Structural maintenance o... 133 9.7e-05 1
UNIPROTKB|O97593 - symbol:SMC1A "Structural maintenance o... 133 9.7e-05 1
UNIPROTKB|E2QV07 - symbol:SMC1A "Structural maintenance o... 133 9.7e-05 1
UNIPROTKB|Q14683 - symbol:SMC1A "Structural maintenance o... 133 9.7e-05 1
UNIPROTKB|F2Z5A8 - symbol:LOC100523938 "Structural mainte... 133 9.7e-05 1
MGI|MGI:1344345 - symbol:Smc1a "structural maintenance of... 133 9.7e-05 1
UNIPROTKB|I3LMC6 - symbol:LOC100523938 "Structural mainte... 133 9.7e-05 1
UNIPROTKB|F1NDC6 - symbol:MYH13 "Uncharacterized protein"... 145 0.00011 2
TAIR|locus:2183750 - symbol:AT5G10950 "AT5G10950" species... 126 0.00012 1
UNIPROTKB|A6NKF2 - symbol:ARID3C "AT-rich interactive dom... 126 0.00012 1
UNIPROTKB|F1RFC2 - symbol:ARID5B "Uncharacterized protein... 130 0.00015 1
UNIPROTKB|E2RGA0 - symbol:ARID3C "Uncharacterized protein... 125 0.00016 1
ZFIN|ZDB-GENE-070103-4 - symbol:nefmb "neurofilament, med... 128 0.00017 1
UNIPROTKB|E1C077 - symbol:CALD1 "Caldesmon" species:9031 ... 128 0.00018 1
UNIPROTKB|E1BVB9 - symbol:CALD1 "Caldesmon" species:9031 ... 128 0.00018 1
UNIPROTKB|F1NT51 - symbol:CALD1 "Caldesmon" species:9031 ... 128 0.00019 1
ASPGD|ASPL0000041042 - symbol:AN2905 species:162425 "Emer... 129 0.00020 1
MGI|MGI:3650624 - symbol:Arid3c "AT rich interactive doma... 124 0.00020 1
RGD|1560943 - symbol:Arid3c "AT rich interactive domain 3... 124 0.00020 1
UNIPROTKB|G5E585 - symbol:ARID5B "AT-rich interactive dom... 129 0.00024 1
UNIPROTKB|G3MWU0 - symbol:ARID3C "Uncharacterized protein... 123 0.00024 1
UNIPROTKB|E1BLP6 - symbol:ARID5B "AT-rich interactive dom... 129 0.00025 1
UNIPROTKB|Q14865 - symbol:ARID5B "AT-rich interactive dom... 129 0.00025 1
MGI|MGI:1930768 - symbol:Arid3b "AT rich interactive doma... 125 0.00026 1
UNIPROTKB|F1MGP2 - symbol:ARID3C "Uncharacterized protein... 123 0.00027 1
UNIPROTKB|K7EJ04 - symbol:ARID3A "AT-rich interactive dom... 114 0.00027 1
UNIPROTKB|I3L967 - symbol:ARID3B "Uncharacterized protein... 121 0.00030 1
TAIR|locus:2207230 - symbol:AT1G05320 "AT1G05320" species... 126 0.00032 1
DICTYBASE|DDB_G0271058 - symbol:vilC "villin-like protein... 129 0.00033 1
UNIPROTKB|Q8IVW6 - symbol:ARID3B "AT-rich interactive dom... 131 0.00040 2
RGD|1306335 - symbol:Arid3b "AT rich interactive domain 3... 123 0.00043 1
ZFIN|ZDB-GENE-070112-1882 - symbol:zgc:158706 "zgc:158706... 123 0.00048 1
UNIPROTKB|F1NAR1 - symbol:ARID5B "AT-rich interactive dom... 126 0.00048 1
ZFIN|ZDB-GENE-100525-3 - symbol:arid5a "AT rich interacti... 131 0.00048 2
ZFIN|ZDB-GENE-070209-182 - symbol:arid3b "AT rich interac... 122 0.00051 1
ZFIN|ZDB-GENE-090506-9 - symbol:smc1a "structural mainten... 126 0.00055 1
RGD|1308736 - symbol:Hmgn5b species:10116 "Rattus norvegi... 120 0.00060 1
UNIPROTKB|D4A2K3 - symbol:LOC680182 "RCG38177, isoform CR... 120 0.00060 1
ZFIN|ZDB-GENE-031112-4 - symbol:stm "starmaker" species:7... 122 0.00062 1
GENEDB_PFALCIPARUM|PF14_0563 - symbol:PF14_0563 "DEAD-box... 123 0.00062 1
UNIPROTKB|Q8IKP1 - symbol:PF14_0563 "DEAD box helicase, p... 123 0.00062 1
UNIPROTKB|E1BQV7 - symbol:E1BQV7 "Uncharacterized protein... 125 0.00069 1
RGD|61991 - symbol:Smc1a "structural maintenance of chrom... 125 0.00070 1
UNIPROTKB|Q9Z1M9 - symbol:Smc1a "Structural maintenance o... 125 0.00070 1
UNIPROTKB|F1PDC9 - symbol:ARID3A "Uncharacterized protein... 118 0.00071 2
WARNING: Descriptions of 11 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2827523 [details] [associations]
symbol:AT2G17410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
Pfam:PF00011 InterPro:IPR002068 GO:GO:0005634 EMBL:CP002685
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 InterPro:IPR008978
SUPFAM:SSF49764 PROSITE:PS01031 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:AY052359 EMBL:BT002633 EMBL:AK176382 EMBL:AK230281
IPI:IPI00548500 PIR:G84551 RefSeq:NP_179333.2 UniGene:At.12107
ProteinModelPortal:Q940Y3 SMR:Q940Y3 PRIDE:Q940Y3
EnsemblPlants:AT2G17410.1 GeneID:816247 KEGG:ath:AT2G17410
TAIR:At2g17410 eggNOG:NOG313221 HOGENOM:HOG000151156
InParanoid:Q940Y3 OMA:NDANNES PhylomeDB:Q940Y3
ProtClustDB:CLSN2680092 Genevestigator:Q940Y3 Uniprot:Q940Y3
Length = 786
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 253/565 (44%), Positives = 341/565 (60%)
Query: 191 GSHVH-PMNPECAAVNESSSEI-KAENNKMGEKLDGA-AVFYASAKKLSGSKTNGSLNQL 247
G H P NP+ V E++ I + E N + DG+ AV + K K
Sbjct: 243 GEHKEIPANPDTKVVEENNDRIDEGEANNLNLAGDGSGAVDHDYLTKTELDKVLEVPGSE 302
Query: 248 ECATADERPSEVKAQNDEKREK-LEDVSVDV-----SASKLYGTKNDGIESHVLTLNQLE 301
+ ++RPSE ++ EK LE +V++ S + G +V+++ L
Sbjct: 303 TISKLEDRPSEHLSETSMNVEKELEMPAVEILPDNDKNSDVLAVGVSGDSDNVVSV--LP 360
Query: 302 FAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKN 361
++ SSD ++G + D D K + D LV + +V+ + N H+ A
Sbjct: 361 ASQTSSD-----RDEGMITVDAEPTEDMKLDVPDSKLVTDTTVDS---TNNKDAHVEANT 412
Query: 362 QLESAAADERSLETKDEDDKRGD-KLNDGVADMELTLESEVKESKPEVDVG-YEVSKES- 418
+ + ++ +L D +++ K G ++SE + S +++ G +++ +
Sbjct: 413 ERQDNSS---ALVLNDANNESAPVKRVPGPYVASSNIKSEARGSG-DLNNGVHKIVRTPP 468
Query: 419 -------SNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKEDLNL 471
+ SFL + ++G+ESGTE++Q AF KE+++F+RERN++FK PKFY E LN
Sbjct: 469 VFDGTMRAKRSFLLDD-ASDGNESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNC 527
Query: 472 LKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHRMSN 531
LKLWRAV +LGGYD+VT KLWRQVGESF PPKTCTTVSWTFR FYEKALLEYE+H++S
Sbjct: 528 LKLWRAVTRLGGYDKVTGSKLWRQVGESFRPPKTCTTVSWTFRGFYEKALLEYERHKVSE 587
Query: 532 GELPLHDGSLTEPSRIESQAAGSQAFGSGXXXXXXXXXXMQGWHSKRLLGSGEVCQPIIK 591
GEL + EP I++QA+GS G MQGWHS+RL G+GEV P IK
Sbjct: 588 GELQIPLPLELEPMNIDNQASGS-----GRARRDAASRAMQGWHSQRLNGNGEVSDPAIK 642
Query: 592 EKNSSCTTKSDRQIKNI-GLLKRKKPSTVEHSIQVANVKATNPQLDTMVIDIGPPADWVK 650
+KN K ++QI GLLKRK+ + EH + A + + LD V+D+GPPADWVK
Sbjct: 643 DKNLVLHQKREKQIGTTPGLLKRKRAA--EHGAKNA-IHVSKSMLDVTVVDVGPPADWVK 699
Query: 651 INVQRTIDCFEVYALVPGLLREEVHVQSDPAGRLVISGQPEHMDNPWGVTPFKKVVSLPS 710
INVQRT DCFEVYALVPGL+REEV VQSDPAGRLVISG+PE+ NPWG TPFKKVVSLP+
Sbjct: 700 INVQRTQDCFEVYALVPGLVREEVRVQSDPAGRLVISGEPENPMNPWGATPFKKVVSLPT 759
Query: 711 RIDPHQTSAVVTLHGQLFVRVPFEQ 735
RIDPH TSAVVTL+GQLFVRVP EQ
Sbjct: 760 RIDPHHTSAVVTLNGQLFVRVPLEQ 784
>TAIR|locus:2037345 [details] [associations]
symbol:AT1G20910 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
InterPro:IPR002068 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031
Gene3D:1.10.150.60 SUPFAM:SSF46774 ProtClustDB:CLSN2680092
EMBL:AC007369 EMBL:AB493470 IPI:IPI00543271 PIR:G86341
RefSeq:NP_173515.2 UniGene:At.43690 ProteinModelPortal:C0SUW7
SMR:C0SUW7 PaxDb:C0SUW7 PRIDE:C0SUW7 EnsemblPlants:AT1G20910.1
GeneID:838684 KEGG:ath:AT1G20910 TAIR:At1g20910 eggNOG:NOG284320
HOGENOM:HOG000239411 OMA:ANNGHGM PhylomeDB:C0SUW7
Genevestigator:C0SUW7 Uniprot:C0SUW7
Length = 398
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 185/347 (53%), Positives = 241/347 (69%)
Query: 389 GVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEV 448
GV D V+ P+ + G K + +L + DE+GT EQVAF +EV
Sbjct: 61 GVVDHSERKTRRVQMLSPKTE-GENAKKRKT---WLLDSEAQGTDEAGTPVEQVAFLREV 116
Query: 449 ENFYRERNLEFKHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTT 508
E FY+E LEFK PKFY + LN+LKLWRAV+ LGGY+ VT+ KLWRQVGESFNPPKTCTT
Sbjct: 117 EAFYKESFLEFKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTT 176
Query: 509 VSWTFRIFYEKALLEYEKHRMSNGELPLHDGSLTEPSRIESQAAGSQAFGSGXXXXXXXX 568
VS+TFR FYEKALLEYEK +NGEL L +L S +E + + Q GSG
Sbjct: 177 VSYTFRNFYEKALLEYEKCLRNNGELNLPGSTLILSSSVEKEPSSHQGSGSGRARRDSAA 236
Query: 569 XXMQGWHSKRLLGSGEVCQPIIKEKNSSCTTKSDRQIKNIGLLKRKKPSTVEHSIQVANV 628
MQGWH++RL+GSGEV P +K+K T K +++K+IGL K K+ ++++H +
Sbjct: 237 RAMQGWHAQRLVGSGEVTAPAVKDKGLISTPKH-KKLKSIGLQKHKQQTSMDHVV----T 291
Query: 629 KATNPQLDTMVIDIGPPADWVKINVQRTIDCFEVYALVPGLLREEVHVQSDPAGRLVISG 688
+ QL V+D+GP ADWVKINV+ + D FE++ALVPGLLR+EV +QSDPAG++VI+G
Sbjct: 292 NEADKQLAAEVVDVGPVADWVKINVKESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITG 351
Query: 689 QPEHMDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 735
QPE +DNPWG+TPFKK+V L +RIDP TSAV+++HG+LF+RVPFEQ
Sbjct: 352 QPEQLDNPWGITPFKKIVDLSARIDPLHTSAVMSMHGRLFIRVPFEQ 398
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 190 (71.9 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 103/465 (22%), Positives = 189/465 (40%)
Query: 29 SDGETNVDVKDPPFSIPEKNQDDMSSD-NIDLQTDNNDVM-SVGLPSDNNGSVDNQTADD 86
S+ +T+ + ++ E+ D+ S+ +++ + + DV S GL + + S + + +D
Sbjct: 909 SESKTDAHSEMGTYNRKEEESDEEESEGSVNERDETEDVEESDGLGNRRDKSEEVEDSDS 968
Query: 87 V---KVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVH 143
KV N D G+ N V + EN + +
Sbjct: 969 KTHDKVGENDDDSEGDEDDDTMIKDSSEEEESEEEKTVNDTVTKASSENEEREEE----E 1024
Query: 144 PLNQHEHVAAEERLTKIEAENGEKE-EKLDDDSVVGVSANELSGTRNDGSHVHPMNPECA 202
N E + +TK +E+ EKE E+ DS S +E +N G + +
Sbjct: 1025 KSNDSE---VNDTMTKHSSEDEEKEKEEKSSDSSNASSEDEEEEEKN-GDSAKASSEDEE 1080
Query: 203 AVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGS-LN--QLECATADERPSEV 259
+S S +KA + E+ + F AS+K+ SG N S +N + E + E ++
Sbjct: 1081 EEEKSGSSVKASSEDEEEEEENGDSFKASSKEESGDSANASNVNSEEEEQKSKSEATDDL 1140
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQL-EFAERSSDIKAKN----- 313
+++ +E E E+ + SAS + +D +S + E +E +S+ +++
Sbjct: 1141 ESEEEEDNEDNEEEKSETSASTEDESNDDEDKSETSQEEESGEESEGNSESRSERSEEDD 1200
Query: 314 -EEKGEKSDDHI---SKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAAD 369
+E+ EK + + ++ DE E + E + + K++ + + E D
Sbjct: 1201 EDEESEKEESEVESEAEEDETGENTSEEDDEEQESSSEDEEKSESEAEGEEEESEGDQED 1260
Query: 370 ERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
E ET D+D++ + N+ + E +E E +ES E + E ++E E
Sbjct: 1261 ESDEETSDKDEEEEESENEEEEEEESKVEEEEEESNEEEENEEEEAEEEEPGEDTEEAED 1320
Query: 430 AEGDESGT-EDEQVAFAKEVENFYRERNLEFKHPKFYKEDLNLLK 473
EG+E T E+EQ E E E E K K L K
Sbjct: 1321 EEGEEEDTQEEEQENGDDEEEEEEEEEEKEKTKTKREKASSRLQK 1365
>UNIPROTKB|F1SU48 [details] [associations]
symbol:ARID5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035066 "positive
regulation of histone acetylation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002062 "chondrocyte differentiation"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005730 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 OMA:GLMHFPP EMBL:FP102745
Ensembl:ENSSSCT00000008899 Uniprot:F1SU48
Length = 597
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 406 PEVDVGYEVSKESSNLSFLFEPPVAEGD--ESGTEDEQVAFAKEVENFYRERNLEFKH-P 462
P+ D G S+ L +PP A G+ E +E+ AF + F +ER+ + P
Sbjct: 24 PQPDGGQSRSQSPVQLE---DPPEAGGEREEEQEREEEQAFLVSLYKFMKERHTPIERVP 80
Query: 463 KFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALL 522
+ +NL K+++AV KLG Y+ VT +LW+ V + T+ + R YE+ +L
Sbjct: 81 HLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVL 140
Query: 523 EYEKHRMSNGELPLHDGSLTEPSRIESQAAG 553
Y +H + PL + ++ +A G
Sbjct: 141 PYVRHLKGEDDKPLPPSKPRKQYKMAKEAQG 171
>DICTYBASE|DDB_G0291444 [details] [associations]
symbol:DDB_G0291444 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0291444 Pfam:PF05022 EMBL:AAFI02000177
InterPro:IPR007718 RefSeq:XP_635213.1 STRING:Q54EM7
EnsemblProtists:DDB0183896 GeneID:8628159 KEGG:ddi:DDB_G0291444
eggNOG:NOG140707 InParanoid:Q54EM7 OMA:TICEESS Uniprot:Q54EM7
Length = 447
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 67/300 (22%), Positives = 139/300 (46%)
Query: 133 SSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGS 192
+ KS + PL++ E + ++ K+E ++ + + D +S S +E
Sbjct: 52 NENKSKDNKKRPLDEKEEEKSSKK-HKVEKDSSDSSDSSDSESDSSDSEDEKEKEMKVDK 110
Query: 193 HVHPMNPECAAVNESSSEIKAENNKMGEK-LDGAAVFYA---SAKKLSGSKTNGSLNQLE 248
+ + ESSS ++E+ K EK D ++ + S+ S S+++ S + E
Sbjct: 111 KTEDSSSSSESDTESSSSSESEDEKKKEKESDDSSSSESESDSSSSESESESSESSSSSE 170
Query: 249 CATADERPSEVKAQND-----EKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFA 303
+ DE+ E +D EK++K+E S D S+S+ + + ES ++E +
Sbjct: 171 SESEDEKKKESSDSSDSESEDEKKKKVE--SSDSSSSESESSDSSDSESEDEKKKKVESS 228
Query: 304 ERSS-DIKAKNEEKGEKSDDHISKN-DEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKN 361
+ SS + ++ + + SD S++ DEK++K++ + E S + +D K+
Sbjct: 229 DSSSSESESSSSSSSDSSDSSDSESEDEKKKKVEKSSDKETSSESESEDSDD-----EKD 283
Query: 362 QLESAAADERSLETKDEDDKRGDKLNDGVADMEL-TLESEVKESKPEVDVGYEVSKESSN 420
+ +S D++ + ++E K +K +D +D E+ +E K+ + V+K +SN
Sbjct: 284 KKKSKKEDKKENKKQEEKKKPIEKDSDEDSDDEMKVVEQPKKQEIKQQQQQQTVNKNNSN 343
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00064
Identities = 47/214 (21%), Positives = 96/214 (44%)
Query: 244 LNQLECATADERP-SEVKAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEF 302
+N+ + +RP E + + K+ K+E S D S S +++D +S +++
Sbjct: 51 INENKSKDNKKRPLDEKEEEKSSKKHKVEKDSSDSSDSS--DSESDSSDSEDEKEKEMKV 108
Query: 303 AERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQ 362
+++ D + +E E S S++++K+EK D S + S+++ + +
Sbjct: 109 DKKTEDSSSSSESDTESSSSSESEDEKKKEKESDDSSSSESESDSSSSESESESSESSSS 168
Query: 363 LESAAADERSLETKD------EDDKRGD-KLNDGVADMELTLESEVKESKPEVDVGYEVS 415
ES + DE+ E+ D ED+K+ + +D + + +S ES+ E E S
Sbjct: 169 SESESEDEKKKESSDSSDSESEDEKKKKVESSDSSSSESESSDSSDSESEDEKKKKVESS 228
Query: 416 KESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVE 449
SS+ S ++ +S + + K+VE
Sbjct: 229 DSSSSESESSSSSSSDSSDSSDSESEDEKKKKVE 262
>UNIPROTKB|Q3SWY1 [details] [associations]
symbol:ARID5A "AT-rich interactive domain-containing
protein 5A" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 EMBL:BC104604 IPI:IPI00705467
RefSeq:NP_001030426.1 UniGene:Bt.45843 ProteinModelPortal:Q3SWY1
SMR:Q3SWY1 PRIDE:Q3SWY1 Ensembl:ENSBTAT00000026200 GeneID:524118
KEGG:bta:524118 CTD:10865 eggNOG:NOG265834 HOGENOM:HOG000034050
HOVERGEN:HBG062210 InParanoid:Q3SWY1 OrthoDB:EOG4BCDMM
NextBio:20873893 Uniprot:Q3SWY1
Length = 592
Score = 151 (58.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 424 LFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLG 482
L EPP A + ++E+ AF + F +ER+ + P + +NL K+++AV KLG
Sbjct: 38 LEEPPEAGREREEEQEEEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLG 97
Query: 483 GYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
Y+ VT +LW+ V + T+ + R YE+ +L Y +H + PL
Sbjct: 98 AYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPL 151
>UNIPROTKB|G3MY61 [details] [associations]
symbol:ARID5A "AT-rich interactive domain-containing
protein 5A" species:9913 "Bos taurus" [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0035066 "positive regulation of histone
acetylation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0005730 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00510000046413
OMA:GLMHFPP EMBL:DAAA02030120 Ensembl:ENSBTAT00000064181
Uniprot:G3MY61
Length = 637
Score = 151 (58.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 424 LFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLG 482
L EPP A + ++E+ AF + F +ER+ + P + +NL K+++AV KLG
Sbjct: 38 LEEPPEAGREREEEQEEEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLG 97
Query: 483 GYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
Y+ VT +LW+ V + T+ + R YE+ +L Y +H + PL
Sbjct: 98 AYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPL 151
>ZFIN|ZDB-GENE-081028-53 [details] [associations]
symbol:ch1073-321c8.1 "ch1073-321c8.1" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00298 SMART:SM00501 InterPro:IPR002999
ZFIN:ZDB-GENE-081028-53 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 GeneTree:ENSGT00510000046413 EMBL:CU638703
EMBL:CU639406 EMBL:CU639467 EMBL:CU681839 IPI:IPI00629769
Ensembl:ENSDART00000128415 ArrayExpress:F1R2N8 Bgee:F1R2N8
Uniprot:F1R2N8
Length = 1249
Score = 154 (59.3 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 83/367 (22%), Positives = 149/367 (40%)
Query: 284 GTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK--SDDHISKNDEKREKLDDALVFE 341
G +++ I+ + + E E D + +NEE K + + ND+K+ ALV
Sbjct: 144 GRRSNPIQEEESSSSSSE--EEEGD-QQQNEELYGKVVCVEGVLTNDKKKSTWYPALVIS 200
Query: 342 VSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDKRGDKLNDGVAD-MELTLESE 400
++ K D + + + + + + DED + K + G+ ++ E +
Sbjct: 201 PDCHEDVTLKKDNVFVRSFKDGKFYTVLRKDIRELDED--KAPKADAGLKPALDAAWEFQ 258
Query: 401 VKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGT---EDEQVA-FAKEVENF----Y 452
+ P EV ESS+ E E +E + E+E+V F +E +NF Y
Sbjct: 259 RNGAVPNT-WRTEVKDESSSSEDEEEEEEEEQEEEASSEEEEEEVEPFPEEKDNFLQQLY 317
Query: 453 R---ERNLEF-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTT 508
+ +R K P ++LNL KL+R V KLGG+D + S +W+QV + P +
Sbjct: 318 KFMEDRGTPINKRPVLGYKNLNLFKLYRLVHKLGGFDNIESGSVWKQVYQDLGIPVLNSA 377
Query: 509 VSWTFRIFYEKALLEYEKHRMSNG-----ELPLHDGSLTEPSRIESQAAGSQAFGSGXXX 563
+ + Y K L +E + S G +LP G E + +++ + +G
Sbjct: 378 AGYNVKCAYRKYLYGFEDYCTSTGISFRMDLPYKTG---EKASCKTEVKAEEVISAGNTV 434
Query: 564 XXXXXXXMQGWHSKRLLGSGEVC-QPIIKEKNSSCTTKSDRQIKNIGLLKRKKPSTVEHS 622
H K + S C + ++KE+ + T + + G K + E +
Sbjct: 435 SLNTPEE----H-KSITESERSCTRHLLKEEKTETVTPCEEKADISGENKEDEKHAEEEN 489
Query: 623 IQVANVK 629
VK
Sbjct: 490 EMNEEVK 496
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 148 (57.2 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 76/319 (23%), Positives = 134/319 (42%)
Query: 129 AKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTR 188
+ ++ S+ SD S ++ E + + +I+ E E E + +S N+ GT+
Sbjct: 199 SSDSDSSDSDSSSSESESEDEKKKKDTKKVEIKKEESESESS-ESESEDENKDNKKVGTK 257
Query: 189 NDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLE 248
+ S + ++ +ES E K +NNK E A S+ S S++ S +
Sbjct: 258 KEESSD---SDSSSSESESEDEKKKKNNKKVE-----AKKEESSDSESESESESSSSSSS 309
Query: 249 CATADERPSEVKAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSD 308
++ E E K ++ +K E ++ S D S S +++ ++ + + + E ++ S
Sbjct: 310 SSSESESEDEKKKKDSKKVETKKEGSSD-SESSSESVEDEKMDIEKVEIKKEESSDSESS 368
Query: 309 IKAKNEEKGEKSDDHISKNDEKREKLDDALVF---EVSVNKLCDSKNDGIHMHAKNQLES 365
A +E K E+ D I K + K+E+ + E +K DS +D K + ES
Sbjct: 369 SPASSESKEEEKMD-IEKEETKKEESSSSSSESEEEQKKSKKEDSDSDESSEDEKKKEES 427
Query: 366 AAADERSLETKDED-DKRGD----KLNDGVADMELTLESEVKESKPEVDVGYEVSKESSN 420
+++ E E K ED D K D + E E K+ K E KES +
Sbjct: 428 SSSSESEDEKKKEDSDSESSEDEKKKEDSDSSSSSESEDEDKKKKDSSSSESESEKESDS 487
Query: 421 LSFLFEPPVAEGDESGTED 439
S +E D S + D
Sbjct: 488 SS-----SSSESDSSSSSD 501
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 62/266 (23%), Positives = 120/266 (45%)
Query: 205 NESSSEIKAENNKMGE--KLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQ 262
+ S E K ++NK E K++ V KK+ K S + + +D SE +++
Sbjct: 163 SSSEDEKKKKDNKKVETKKVETKKV---ETKKVETKKEESS--DSDSSDSDSSSSESESE 217
Query: 263 NDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDD 322
+++K++ + V + S+ ++++ + + E SSD + + E E D+
Sbjct: 218 DEKKKKDTKKVEIKKEESESESSESESEDENKDNKKVGTKKEESSDSDSSSSES-ESEDE 276
Query: 323 HISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDKR 382
KN++K E E S + +S+++ + + ES + DE+ K +D K+
Sbjct: 277 KKKKNNKKVEAKK-----EESSDSESESESESSSSSSSSSSESESEDEK----KKKDSKK 327
Query: 383 GDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQV 442
+ +G +D E + ES V++ K +++ E+ KE S+ S P +E E D +
Sbjct: 328 VETKKEGSSDSESSSES-VEDEKMDIEK-VEIKKEESSDSESSSPASSESKEEEKMDIEK 385
Query: 443 AFAKEVENFYRERNLEFKHPKFYKED 468
K+ E+ E + K KED
Sbjct: 386 EETKKEESSSSSSESEEEQKKSKKED 411
Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 77/389 (19%), Positives = 146/389 (37%)
Query: 35 VDVKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTADDVKVNTNVD 94
V+ K P + ++ D SD+ D +++ + V+ + + KV T +
Sbjct: 141 VETKKPIKKV--ESSDSSDSDSSDSSSEDEKKKKDNKKVETK-KVETKKVETKKVETKKE 197
Query: 95 RLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLNQHEHVAAE 154
+ V+ I KE S ++S S N+
Sbjct: 198 ESSDSDSSDSDSSSSESESEDEKKKKDTKKVE-IKKEESESESSESESEDENKDNKKVGT 256
Query: 155 ERLTKIEAENGEKEEKLDDDSVVGVSAN-ELSGTRNDGSHVHPMNPECAAVNESSSEIKA 213
++ ++++ E + +D+ + E + S + ++ + SSSE ++
Sbjct: 257 KKEESSDSDSSSSESESEDEKKKKNNKKVEAKKEESSDSESESESESSSSSSSSSSESES 316
Query: 214 ENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKREKLEDV 273
E+ K +K D V KK S + S +E D E+K + E
Sbjct: 317 EDEK--KKKDSKKV---ETKKEGSSDSESSSESVEDEKMDIEKVEIKKEESSDSESSSPA 371
Query: 274 SVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKNDEKREK 333
S S SK K D IE + + S+ + K +K + D S++++K+E+
Sbjct: 372 S---SESK-EEEKMD-IEKEETKKEESSSSSSESEEEQKKSKKEDSDSDESSEDEKKKEE 426
Query: 334 LDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDKRGDKLNDGVADM 393
+ E K DS ++ K + +++ S E++DED K+ D + ++
Sbjct: 427 SSSSSESEDEKKKE-DSDSESSEDEKKKEDSDSSS---SSESEDEDKKKKDSSS---SES 479
Query: 394 ELTLESEVKESKPEVDVGYEVSKESSNLS 422
E ES+ S E D +SS+ S
Sbjct: 480 ESEKESDSSSSSSESDSSSSSDSDSSSSS 508
Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00083
Identities = 66/324 (20%), Positives = 128/324 (39%)
Query: 129 AKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTR 188
+ E+ K D V + E E + + + E + D DS S +E +
Sbjct: 164 SSEDEKKKKDNKKVET-KKVETKKVETKKVETKKEESSDSDSSDSDSSSSESESEDEKKK 222
Query: 189 NDGSHVHPMNPECAAVN-ESSSEIK-AENNKMGEKLDGAAVFYASAKKLSGS-----KTN 241
D V E + + ES SE + +N K+G K + ++ +S+ + K N
Sbjct: 223 KDTKKVEIKKEESESESSESESEDENKDNKKVGTKKEESSDSDSSSSESESEDEKKKKNN 282
Query: 242 GSLNQLECATAD-ERPSEVKAQNDEKREKLEDVSVDVSA---SKLYGTKNDGIESHVLTL 297
+ + ++D E SE ++ + E S D SK TK +G +
Sbjct: 283 KKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSKKVETKKEGSSDSESSS 342
Query: 298 NQLEFAERSSD-IKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIH 356
+E + + ++ K EE + + ++ K E+ D E + S ++
Sbjct: 343 ESVEDEKMDIEKVEIKKEESSDSESSSPASSESKEEEKMDIEKEETKKEESSSSSSESEE 402
Query: 357 MHAKNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
K++ E + +DE S ED+K+ ++ + ++ E + E +S+ D +
Sbjct: 403 EQKKSKKEDSDSDESS-----EDEKKKEESSSS-SESEDEKKKEDSDSESSEDEKKKEDS 456
Query: 417 ESSNLSFLFEPPVAEGDESGTEDE 440
+SS+ S + + D S +E E
Sbjct: 457 DSSSSSESEDEDKKKKDSSSSESE 480
>WB|WBGene00000476 [details] [associations]
symbol:cfi-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0045165 "cell fate commitment" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0005634 GO:GO:0006355
GO:GO:0030182 GO:GO:0003677 GO:GO:0006351 GO:GO:0045165
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
eggNOG:NOG327790 InterPro:IPR023334 PROSITE:PS51486 HSSP:Q24573
EMBL:AF487547 EMBL:Z81128 EMBL:AL023824 EMBL:Z81033 PIR:T25159
RefSeq:NP_492644.2 UniGene:Cel.180 ProteinModelPortal:O02326
SMR:O02326 PaxDb:O02326 EnsemblMetazoa:T23D8.8 GeneID:188793
KEGG:cel:CELE_T23D8.8 UCSC:T23D8.8 CTD:188793 WormBase:T23D8.8
HOGENOM:HOG000017380 InParanoid:O02326 OMA:YDEENTN NextBio:940112
Uniprot:O02326
Length = 467
Score = 147 (56.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 49/174 (28%), Positives = 88/174 (50%)
Query: 379 DDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTE 438
DD + N G + +LTL KE+ + + E +S ++ +E + E +
Sbjct: 123 DDYDEENTNQGEPE-DLTLGGFRKETSVKSEEPSESGINASGPAWSYEEQFKQLYELSDD 181
Query: 439 DEQVAFAKEVENF-YRERNLEFKHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVG 497
++ + + NF +R + P K+ L+L +L+R V++ GG E+ + KLWR++
Sbjct: 182 VKRKEWLDDWLNFMHRIGKPVTRIPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREIT 241
Query: 498 ESFNPPKTCTTVSWTFRIFYEKALLEYE--KHRMSN-GELPLH-DGSLTE-PSR 546
+ N P + T+ ++T R Y+K L +YE K ++SN +L DG+ E P R
Sbjct: 242 KGLNLPSSITSAAFTLRTQYQKYLYDYECEKEKLSNQSDLQQAIDGNRREAPGR 295
>MGI|MGI:2137512 [details] [associations]
symbol:Arid4b "AT rich interactive domain 4B (RBP1-like)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0034773 "histone H4-K20 trimethylation"
evidence=IGI] [GO:0036124 "histone H3-K9 trimethylation"
evidence=IGI] InterPro:IPR000953 InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00298 SMART:SM00501 InterPro:IPR002999
MGI:MGI:2137512 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SMART:SM00333 GO:GO:0006349 Gene3D:1.10.150.60
SUPFAM:SSF46774 eggNOG:NOG248805 HOVERGEN:HBG058247
InterPro:IPR016197 InterPro:IPR012603 InterPro:IPR025995
Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160 CTD:51742 OMA:FRLVHKL
ChiTaRS:ARID4B EMBL:CT025604 EMBL:BC137783 EMBL:AK031062
EMBL:AK041414 IPI:IPI00380954 IPI:IPI00776412 RefSeq:NP_919238.1
RefSeq:NP_937755.1 UniGene:Mm.439784 ProteinModelPortal:A2CG63
SMR:A2CG63 IntAct:A2CG63 STRING:A2CG63 PhosphoSite:A2CG63
PaxDb:A2CG63 PRIDE:A2CG63 Ensembl:ENSMUST00000039538
Ensembl:ENSMUST00000110533 Ensembl:ENSMUST00000110534
Ensembl:ENSMUST00000110536 Ensembl:ENSMUST00000129488 GeneID:94246
KEGG:mmu:94246 UCSC:uc007pmz.1 UCSC:uc007pna.1
GeneTree:ENSGT00510000046413 InParanoid:B2RQ67 OrthoDB:EOG4GQQ47
NextBio:352259 Bgee:A2CG63 CleanEx:MM_ARID4B Genevestigator:A2CG63
GO:GO:0036124 GO:GO:0034773 Uniprot:A2CG63
Length = 1314
Score = 151 (58.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 67/257 (26%), Positives = 115/257 (44%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS +EE+ +++D+ + K D + A+ F V +C +D
Sbjct: 147 NHIPEEESSSSSSDDDEEERKQTDELLGKVVCVDYVSLEKKKAMWFPALV--VCPDCSDE 204
Query: 355 IHMHAKNQLESAAADER--SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPE-VDVG 411
I + N L + D + S+ KD + D + A ++ + ++ K +
Sbjct: 205 IAVKKDNILVRSFKDGKFTSVPRKDVHEITSDTVPKPDAVLKQAFDQALEFHKSRAIPAN 264
Query: 412 YEVS-KESSNLSFLFEPPVAEGDE------SGTEDEQVA-FAKEVENF----YR---ERN 456
++ KE S+ S E E DE S E+E++ F +E ENF Y+ +R
Sbjct: 265 WKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRG 324
Query: 457 LEF-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRI 515
K P +LNL KL+R V KLGG+D + S +W+QV + P + + +
Sbjct: 325 TPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKC 384
Query: 516 FYEKALLEYEKH-RMSN 531
Y+K L +E++ R +N
Sbjct: 385 AYKKYLYGFEEYCRSAN 401
>UNIPROTKB|F1LRI4 [details] [associations]
symbol:Arid5a "Protein Arid5a" species:10116 "Rattus
norvegicus" [GO:0002062 "chondrocyte differentiation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0035066 "positive
regulation of histone acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 RGD:1311041 GO:GO:0005730
GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774 IPI:IPI00777468
Ensembl:ENSRNOT00000059916 ArrayExpress:F1LRI4 Uniprot:F1LRI4
Length = 615
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 394 ELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYR 453
E + E +++E E SK S + L + P A G++ E+EQ AF + F +
Sbjct: 36 EQSEEGDLQEPPVSPKPQDEQSKSQSPIQ-LEDSPKAGGEQ---EEEQ-AFLVSLYKFMK 90
Query: 454 ERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWT 512
ER+ + P + +NL K+++AV KLG Y+ VT +LW+ V + T+ +
Sbjct: 91 ERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATC 150
Query: 513 FRIFYEKALLEYEKHRMSNGELPL 536
R YE+ +L Y +H + PL
Sbjct: 151 TRRHYERLVLPYVRHLKGEDDKPL 174
>UNIPROTKB|F1PXY8 [details] [associations]
symbol:ARID5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 CTD:10865 OMA:GLMHFPP
EMBL:AAEX03010895 EMBL:AAEX03010894 RefSeq:XP_540165.2
ProteinModelPortal:F1PXY8 Ensembl:ENSCAFT00000010557 GeneID:483050
KEGG:cfa:483050 Uniprot:F1PXY8
Length = 602
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 406 PEVDVGYEVSKESSNLSFLFEPPVAEGD--ESGTEDEQVAFAKEVENFYRERNLEFKH-P 462
P+ D G E S+ S + L + P A G+ E +E+ AF + F +ER+ + P
Sbjct: 24 PQPD-G-EQSRSQSPIH-LEDSPEAGGEREEDQEREEEQAFLVSLYKFMKERHTPIERVP 80
Query: 463 KFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALL 522
+ +NL K+++AV KLG Y+ VT +LW+ V + T+ + R YE+ +L
Sbjct: 81 HLGFKQINLWKIYKAVEKLGAYEMVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVL 140
Query: 523 EYEKHRMSNGELPL 536
Y +H + PL
Sbjct: 141 PYVRHLKGEDDKPL 154
>UNIPROTKB|Q4LE39 [details] [associations]
symbol:ARID4B "AT-rich interactive domain-containing
protein 4B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000953
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00298
SMART:SM00501 InterPro:IPR002999 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG248805
HOVERGEN:HBG058247 InterPro:IPR016197 InterPro:IPR012603
InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160
EMBL:AF214114 EMBL:AY220790 EMBL:AF208045 EMBL:AB030181
EMBL:AB210032 EMBL:AL391994 EMBL:AL133418 EMBL:BC048959
EMBL:BC062536 EMBL:BC104632 EMBL:BC130418 EMBL:BX648820
EMBL:AL133594 EMBL:AF227899 EMBL:AF083249 EMBL:AK023144
IPI:IPI00302917 IPI:IPI00328828 IPI:IPI00647132 IPI:IPI00647647
PIR:T43497 RefSeq:NP_001193723.1 RefSeq:NP_057458.4
RefSeq:NP_112739.2 UniGene:Hs.575782 HSSP:Q14865
ProteinModelPortal:Q4LE39 SMR:Q4LE39 IntAct:Q4LE39 STRING:Q4LE39
PhosphoSite:Q4LE39 DMDM:143955276 PaxDb:Q4LE39 PRIDE:Q4LE39
DNASU:51742 Ensembl:ENST00000264183 Ensembl:ENST00000349213
Ensembl:ENST00000366603 Ensembl:ENST00000418304
Ensembl:ENST00000421364 GeneID:51742 KEGG:hsa:51742 UCSC:uc001hwq.3
UCSC:uc001hwr.3 UCSC:uc001hwt.4 CTD:51742 GeneCards:GC01M235295
HGNC:HGNC:15550 HPA:HPA027333 MIM:609696 neXtProt:NX_Q4LE39
PharmGKB:PA134940494 InParanoid:Q4LE39 OMA:FRLVHKL PhylomeDB:Q4LE39
ChiTaRS:ARID4B GenomeRNAi:51742 NextBio:55820 ArrayExpress:Q4LE39
Bgee:Q4LE39 Genevestigator:Q4LE39 Uniprot:Q4LE39
Length = 1312
Score = 147 (56.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 69/262 (26%), Positives = 114/262 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS ++E+ ++ D+ + K D AL F V +C +D
Sbjct: 147 NHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKALWFPALV--VCPDCSDE 204
Query: 355 IHMHAKNQLESAAADER--SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPE-VDVG 411
I + N L + D + S+ KD + D A ++ E ++ K +
Sbjct: 205 IAVKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPAN 264
Query: 412 YEVS-KESSNLSFLFEPPVAEGDE------SGTEDEQVA-FAKEVENF----YR---ERN 456
++ KE S+ S E E DE S E+E++ F +E ENF Y+ +R
Sbjct: 265 WKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRG 324
Query: 457 LEF-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRI 515
K P +LNL KL+R V KLGG+D + S +W+QV + P + + +
Sbjct: 325 TPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKC 384
Query: 516 FYEKALLEYEKH-RMSNGELPL 536
Y+K L +E++ R +N E +
Sbjct: 385 AYKKYLYGFEEYCRSANIEFQM 406
>DICTYBASE|DDB_G0288285 [details] [associations]
symbol:mybX "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
dictyBase:DDB_G0288285 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GenomeReviews:CM000154_GR SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000109 RefSeq:XP_636792.1 HSSP:P32591
ProteinModelPortal:Q54J55 PRIDE:Q54J55 EnsemblProtists:DDB0220513
GeneID:8626549 KEGG:ddi:DDB_G0288285 eggNOG:COG5259 OMA:WDLINCF
Uniprot:Q54J55
Length = 1620
Score = 147 (56.8 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 68/302 (22%), Positives = 123/302 (40%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNE 206
+ E EE K E E EKEEK + + E N+ + + N+
Sbjct: 497 KEEKEEKEENEEKEEKEEKEKEEKEEKEKQEKEDDKEKQENENEQEKIEKKENK----ND 552
Query: 207 SSS-EIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDE 265
S + EIK ++K E D + + + T S N L ++ +E + E
Sbjct: 553 SQNKEIKENHDKKDETTDSN-----NTTTTTTTTTTTSTNTLVAESSSSSSTETDDNDKE 607
Query: 266 KREKLEDVSVDVSASKLYGTK-NDGIESHVLTLNQLEFAERSSDIKAK---NEEKGEKSD 321
+E+ + D + TK N+G+E+ T + E ++K + N EK + S+
Sbjct: 608 MKEQPVQENKDKEMMETDTTKENNGVETTETTNQTTDSIETDKEMKDQPIINLEKEKSSE 667
Query: 322 D-HISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDD 380
D I+ + + EK D E ++ N+ + +N+ E+ +E+ E ++E +
Sbjct: 668 DKEINDDHNENEKQDKDKENEKEKEDKTENGNEKEN-EKENEKENEKENEK--ENENEKE 724
Query: 381 KRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDE 440
+K N+ + E + E + +VD E+ KE N + E + EDE
Sbjct: 725 NENEKENENKKEKEKENKKENENENEKVDEKIEIDKEGINEDEKMDEEKEEKINNKKEDE 784
Query: 441 QV 442
+V
Sbjct: 785 EV 786
Score = 126 (49.4 bits), Expect = 0.00075, P = 0.00075
Identities = 76/317 (23%), Positives = 137/317 (43%)
Query: 146 NQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVN 205
N++E E++ K +++N E +E D S N + T + N A +
Sbjct: 537 NENEQEKIEKKENKNDSQNKEIKENHDKKDETTDSNNTTTTTTT--TTTTSTNTLVAESS 594
Query: 206 ESSSEIKAENNK------MGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEV 259
SSS +N+K + E D + + K+ +G +T + NQ + E E+
Sbjct: 595 SSSSTETDDNDKEMKEQPVQENKDKEMMETDTTKENNGVETTETTNQT--TDSIETDKEM 652
Query: 260 KAQ---NDEKREKLEDVSVDVSAS---KLYGTKNDGIESHVLTLNQLEFAERSSDIKAKN 313
K Q N EK + ED ++ + K K + E T N E E + + +N
Sbjct: 653 KDQPIINLEKEKSSEDKEINDDHNENEKQDKDKENEKEKEDKTENGNE-KENEKENEKEN 711
Query: 314 EEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSL 373
E++ EK +++ +N+ ++E ++ E K +++N+ + + E DE+
Sbjct: 712 EKENEKENENEKENENEKEN-ENKKEKEKENKKENENENEKVDEKIEIDKEGINEDEKMD 770
Query: 374 ETKDEDDKRGDKLNDGVADMELTLESEVKESK--PEVDVGYEVSKESSNLSFLFEPPVAE 431
E K+E K+N+ D E+ ESE+K+ K +V E+ E+ + E E
Sbjct: 771 EEKEE------KINNKKEDEEV--ESEIKKDKLKENEEVEGEIEGENDEGEVVEEDEDEE 822
Query: 432 GD-ESGTEDEQVAFAKE 447
+ E EDE+ +KE
Sbjct: 823 MEIEEDEEDEEDEKSKE 839
Score = 104 (41.7 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 57/336 (16%), Positives = 128/336 (38%)
Query: 46 EKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTADDVKVNTNVDRLYGNHXXXXX 105
EK +++ + I+ + + ND + + +N+ D +T D T
Sbjct: 533 EKQENENEQEKIEKKENKNDSQNKEI-KENHDKKD-ETTDSNNTTTTTTT-----TTTTS 585
Query: 106 XXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENG 165
T T+ + ++ D ++ E+ E T + +
Sbjct: 586 TNTLVAESSSSSSTETDDNDKEMKEQPVQENKDKEMMETDTTKENNGVETTETTNQTTDS 645
Query: 166 -EKEEKLDDDSVVGVSANELSGTR--NDGSHVHPMNPECAAVNESSSEIKAENN--KMGE 220
E ++++ D ++ + + S + ND H + NE E K EN K E
Sbjct: 646 IETDKEMKDQPIINLEKEKSSEDKEIND-DHNENEKQDKDKENEKEKEDKTENGNEKENE 704
Query: 221 KLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKREKLEDVSVDVSAS 280
K + + K+ K N N+ E E+ E K +N+ + EK+++ +++
Sbjct: 705 KENEKENEKENEKENENEKENE--NEKENENKKEKEKENKKENENENEKVDE-KIEIDKE 761
Query: 281 KLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVF 340
+ + E N+ E E S+IK ++ E+ + I +++ E +++
Sbjct: 762 GINEDEKMDEEKEEKINNKKEDEEVESEIKKDKLKENEEVEGEIEGENDEGEVVEEDEDE 821
Query: 341 EVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETK 376
E+ + + + + D K + +A+++ ++ K
Sbjct: 822 EMEIEEDEEDEEDEKSKEPKKLTTTKSANDQLIKKK 857
Score = 73 (30.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 30/126 (23%), Positives = 56/126 (44%)
Query: 344 VNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKE 403
+ ++ K+D + +L+ + E+ L+ KD+ +K +K D E + E KE
Sbjct: 1055 LERIQKEKDDKEKEDKEKELKEKESKEKELKEKDDKEKEKEKELKEREDKE---KEEDKE 1111
Query: 404 SKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKE-VENFYRERNLEFKHP 462
+K +VD E K+ + + E D+ +D++ KE E ++ + K
Sbjct: 1112 AKDKVDKEKEEDKQKQDKEKEEDKEKQEKDKEEDKDKEKEENKEDKEKEGTDKEGKDKED 1171
Query: 463 KFYKED 468
K KED
Sbjct: 1172 KEIKED 1177
>UNIPROTKB|F1SJW1 [details] [associations]
symbol:F1SJW1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
GO:GO:0005524 GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
GeneTree:ENSGT00580000081569 EMBL:CU694738
Ensembl:ENSSSCT00000000018 OMA:KHESERD Uniprot:F1SJW1
Length = 773
Score = 143 (55.4 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 68/304 (22%), Positives = 128/304 (42%)
Query: 130 KENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRN 189
K+ K++ N+ +++AAE + K+E E E+ + L ++ + +L +
Sbjct: 135 KKRRLQKAEEDAQFNFNKKKNIAAERKHAKLEKEEAERYQNLLEELKINKIQLQLFQLYH 194
Query: 190 DGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLEC 249
+ +H +N E VNE S K E+ E + A +T L LE
Sbjct: 195 NERKIHFLNTELKRVNEDLSVTK-ESLSRHENIVKAKKKEHGMLSRQLQQTEKELKSLEA 253
Query: 250 ATADERPSEVKAQNDEKR--EKLEDVSVDVSASKLYGTKN-DGIESHVLTLNQLEFAERS 306
+RP +KA+ + +KL+ + S+ +K D I++ L L+ A RS
Sbjct: 254 LLNQKRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRS 313
Query: 307 SDIKAKNE--EKGEKSDDHISKNDEKREKLDDA----LVFEVSVNKL-CDSKNDGIHMHA 359
+ + + E KG + S+ D +E + + + KL + K D +
Sbjct: 314 FEKQIEEEILHKGRDIELEASQLDRYKELKEQVRKKVAIMTQQLEKLQWEQKADEERLAF 373
Query: 360 KNQLESAAADE-RSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKES 418
+ + A + + ++ + ED KR +KL + LE + ++ K VD E++K
Sbjct: 374 EKRRHGEAQENLKQVKEQIEDKKRFEKLEEYTKACMTCLEEKKQQEKTLVD---EIAKTK 430
Query: 419 SNLS 422
S +S
Sbjct: 431 SRMS 434
>UNIPROTKB|J9JHT7 [details] [associations]
symbol:ARID4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 InterPro:IPR002999
GO:GO:0003677 GO:GO:0005622 SMART:SM00333 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR012603 Pfam:PF08169
GeneTree:ENSGT00510000046413 EMBL:AAEX03002684 EMBL:AAEX03002683
Ensembl:ENSCAFT00000043863 Uniprot:J9JHT7
Length = 1226
Score = 145 (56.1 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 68/262 (25%), Positives = 114/262 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS ++E+ ++ D+ + K D AL F V +C +D
Sbjct: 145 NHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYVSLDKKKALWFPALV--VCPDCSDE 202
Query: 355 IHMHAKNQLESAAADER--SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPE-VDVG 411
I + N L + D + S+ KD + D A ++ + ++ K +
Sbjct: 203 IAVKKDNILVRSFKDGKFTSVPRKDVHEITSDTTPKPDAILKQAFDQALEFHKSRTIPAN 262
Query: 412 YEVS-KESSNLSFLFEPPVAEGDE------SGTEDEQVA-FAKEVENF----YR---ERN 456
++ KE S+ S E E DE S E+E++ F +E ENF Y+ +R
Sbjct: 263 WKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRG 322
Query: 457 LEF-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRI 515
K P +LNL KL+R V KLGG+D + S +W+QV + P + + +
Sbjct: 323 TPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKC 382
Query: 516 FYEKALLEYEKH-RMSNGELPL 536
Y+K L +E++ R +N E +
Sbjct: 383 AYKKYLYGFEEYCRSANIEFQM 404
>UNIPROTKB|F1RGW9 [details] [associations]
symbol:ARID4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 OMA:FRLVHKL GeneTree:ENSGT00510000046413
EMBL:CU407042 Ensembl:ENSSSCT00000011120 Uniprot:F1RGW9
Length = 1307
Score = 145 (56.1 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 68/262 (25%), Positives = 114/262 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS ++E+ ++ D+ + K D AL F V +C +D
Sbjct: 145 NHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYVSLDKKKALWFPALV--VCPDCSDE 202
Query: 355 IHMHAKNQLESAAADER--SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPE-VDVG 411
I + N L + D + S+ KD + D A ++ + ++ K +
Sbjct: 203 IAVKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFDQALEFHKSRTIPAN 262
Query: 412 YEVS-KESSNLSFLFEPPVAEGDE------SGTEDEQVA-FAKEVENF----YR---ERN 456
++ KE S+ S E E DE S E+E++ F +E ENF Y+ +R
Sbjct: 263 WKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRG 322
Query: 457 LEF-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRI 515
K P +LNL KL+R V KLGG+D + S +W+QV + P + + +
Sbjct: 323 TPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKC 382
Query: 516 FYEKALLEYEKH-RMSNGELPL 536
Y+K L +E++ R +N E +
Sbjct: 383 AYKKYLYGFEEYCRSANIEFQM 404
>UNIPROTKB|F1PYK7 [details] [associations]
symbol:ARID4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 CTD:51742 OMA:FRLVHKL GeneTree:ENSGT00510000046413
EMBL:AAEX03002684 EMBL:AAEX03002683 RefSeq:XP_546077.2
RefSeq:XP_856659.1 ProteinModelPortal:F1PYK7
Ensembl:ENSCAFT00000018209 GeneID:488959 KEGG:cfa:488959
Uniprot:F1PYK7
Length = 1312
Score = 145 (56.1 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 68/262 (25%), Positives = 114/262 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS ++E+ ++ D+ + K D AL F V +C +D
Sbjct: 147 NHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYVSLDKKKALWFPALV--VCPDCSDE 204
Query: 355 IHMHAKNQLESAAADER--SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPE-VDVG 411
I + N L + D + S+ KD + D A ++ + ++ K +
Sbjct: 205 IAVKKDNILVRSFKDGKFTSVPRKDVHEITSDTTPKPDAILKQAFDQALEFHKSRTIPAN 264
Query: 412 YEVS-KESSNLSFLFEPPVAEGDE------SGTEDEQVA-FAKEVENF----YR---ERN 456
++ KE S+ S E E DE S E+E++ F +E ENF Y+ +R
Sbjct: 265 WKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRG 324
Query: 457 LEF-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRI 515
K P +LNL KL+R V KLGG+D + S +W+QV + P + + +
Sbjct: 325 TPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKC 384
Query: 516 FYEKALLEYEKH-RMSNGELPL 536
Y+K L +E++ R +N E +
Sbjct: 385 AYKKYLYGFEEYCRSANIEFQM 406
>DICTYBASE|DDB_G0302588 [details] [associations]
symbol:DDB_G0302588 "RanBP2-type zinc finger"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001876 PROSITE:PS01358 SMART:SM00547
dictyBase:DDB_G0302588 GO:GO:0008270 EMBL:AAFI02000003
GO:GO:0005622 RefSeq:XP_002649209.1 EnsemblProtists:DDB0302589
GeneID:8616202 KEGG:ddi:DDB_G0302588 OMA:VKFESPA Uniprot:C7FZW3
Length = 3566
Score = 149 (57.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 74/322 (22%), Positives = 135/322 (41%)
Query: 157 LTKIEAENGE-KEEKLDDDSVVGVSANE--LSGTRNDGSHVHPMNPECAAVNESSSEIKA 213
L+K N E K++ S S + + V N E + + E+K
Sbjct: 2627 LSKPSLSNNENKDQTSSSPSKPSPSPSNPTFESINKEKESVEDKNQEKDELKDEKDELKD 2686
Query: 214 ENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVK---AQNDEKREK- 269
EN K E + +K + +E +E+ E Q+D+++EK
Sbjct: 2687 ENEKKDENEKKEETVESDKEKEKEETLEETKQSIESDKKEEKKEEKLEEIVQSDKEKEKE 2746
Query: 270 --LEDVSVDVSASKLYGTKNDGIESHVLTLNQ------LEFAERSSDIKAKNEEKGEKSD 321
LE+ + + K K + +E V + + LE ++S + K +EK EK +
Sbjct: 2747 ETLEETKQSIESDKKEDEKEEKLEEIVESDKEKEKEETLEETKQSIESDKKEDEKEEKLE 2806
Query: 322 DHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDK 381
+ I ++D+++EK + + S+ D K D + +++E TK+++++
Sbjct: 2807 E-IVQSDKEKEKEETLEEIKQSIESESDKKEDEMEK-VFSRIEETIKPN-FFSTKEDEEE 2863
Query: 382 RGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQ 441
+GD+L D + E +ES+ ++ K E E +K+S E E ++ T +E
Sbjct: 2864 KGDELKDEKDENENEIESDNEKEKEET---LEETKQS------IESDKKEDEKEETLEEI 2914
Query: 442 VAFAKEVENFYRERNLE-FKHP 462
V KE E +E LE K P
Sbjct: 2915 VQSDKEKE---KEETLEETKQP 2933
>MGI|MGI:2443039 [details] [associations]
symbol:Arid5a "AT rich interactive domain 5A (MRF1-like)"
species:10090 "Mus musculus" [GO:0002062 "chondrocyte
differentiation" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0035066 "positive regulation of histone
acetylation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
MGI:MGI:2443039 GO:GO:0005730 GO:GO:0003677 GO:GO:0045944
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0035066
GO:GO:0002062 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 CTD:10865 eggNOG:NOG265834
HOVERGEN:HBG062210 OrthoDB:EOG4BCDMM OMA:GLMHFPP EMBL:AK041344
EMBL:AK085015 EMBL:AK149839 EMBL:AK150170 EMBL:AK156376
EMBL:AK156622 EMBL:AK156934 EMBL:AK157607 EMBL:BC027152
IPI:IPI00221978 IPI:IPI00652494 IPI:IPI00653928 IPI:IPI00831073
IPI:IPI00831466 RefSeq:NP_001165676.1 RefSeq:NP_001165677.1
RefSeq:NP_666108.2 UniGene:Mm.34316 ProteinModelPortal:Q3U108
SMR:Q3U108 PhosphoSite:Q3U108 PRIDE:Q3U108
Ensembl:ENSMUST00000115029 Ensembl:ENSMUST00000115031
Ensembl:ENSMUST00000115032 Ensembl:ENSMUST00000137906 GeneID:214855
KEGG:mmu:214855 UCSC:uc007apu.2 UCSC:uc007apv.2 UCSC:uc007apx.2
UCSC:uc007apy.2 NextBio:374489 Bgee:Q3U108 CleanEx:MM_ARID5A
Genevestigator:Q3U108 Uniprot:Q3U108
Length = 590
Score = 140 (54.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 433 DESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCK 491
+ G ++E+ AF + F +ER+ + P + +NL K+++AV KLG Y+ VT +
Sbjct: 45 EAGGEQEEEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRR 104
Query: 492 LWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
LW+ V + T+ + R YE+ +L Y +H + PL
Sbjct: 105 LWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPL 149
>UNIPROTKB|Q03989 [details] [associations]
symbol:ARID5A "AT-rich interactive domain-containing
protein 5A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002062 "chondrocyte differentiation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0035066 "positive regulation of histone acetylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0045892 GO:GO:0005730 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q14865 CTD:10865
eggNOG:NOG265834 HOGENOM:HOG000034050 HOVERGEN:HBG062210
OrthoDB:EOG4BCDMM EMBL:M62324 IPI:IPI00012918 PIR:S27962
RefSeq:NP_997646.1 UniGene:Hs.920 ProteinModelPortal:Q03989
SMR:Q03989 IntAct:Q03989 MINT:MINT-2868767 STRING:Q03989
PhosphoSite:Q03989 DMDM:148840818 PRIDE:Q03989 DNASU:10865
Ensembl:ENST00000357485 GeneID:10865 KEGG:hsa:10865 UCSC:uc002swe.3
GeneCards:GC02P097203 HGNC:HGNC:17361 HPA:HPA023879 MIM:611583
neXtProt:NX_Q03989 PharmGKB:PA134937822 InParanoid:Q03989
OMA:GLMHFPP ChiTaRS:ARID5A GenomeRNAi:10865 NextBio:41253
ArrayExpress:Q03989 Bgee:Q03989 CleanEx:HS_ARID5A
Genevestigator:Q03989 Uniprot:Q03989
Length = 594
Score = 140 (54.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 424 LFEPPVAEGD--ESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIK 480
L + P A G+ E +E+ AF + F +ER+ + P + +NL K+++AV K
Sbjct: 39 LEDSPEAGGEREEEQEREEEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEK 98
Query: 481 LGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
LG Y+ VT +LW+ V + T+ + R YE+ +L Y +H + PL
Sbjct: 99 LGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPL 154
>GENEDB_PFALCIPARUM|PF14_0404 [details] [associations]
symbol:PF14_0404 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
GenomeReviews:AE014187_GR RefSeq:XP_001348578.2
ProteinModelPortal:Q8IL45 EnsemblProtists:PF14_0404:mRNA
GeneID:811986 KEGG:pfa:PF14_0404 EuPathDB:PlasmoDB:PF3D7_1442600
Uniprot:Q8IL45
Length = 3543
Score = 132 (51.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 67/279 (24%), Positives = 126/279 (45%)
Query: 207 SSSEIKAENNKMGEKLDGAAVFYASAKKLSGS--KTNGSLNQLECATADERPSE---VKA 261
+ EIK NK + + + + K K + N+ E +++ E K
Sbjct: 2714 NEKEIKEGRNKEIRERNDKEINEGNDKNFEKEIEKQSEEANEKEIKEGNDKIFEEGNYKE 2773
Query: 262 QNDEKREKLEDVS-VDVSASKLYGTKNDGIESHVLTLNQLEFAE-RSSDIKAKNEEKGEK 319
N+ K ++ E+ + DV N+G E + N+ E E +IK N++K E+
Sbjct: 2774 INEGKNKEFEEGNNKDVKEENEKEI-NEGNEEEINEGNEKEIKEGNEKEIKEGNDKKFEE 2832
Query: 320 SDD-HISKNDEKREKLDDALVFEVSVNKLCDSKNDG-IHMHAKNQLESAAADERSLETKD 377
+D I + ++K K D FE + K + ND I + ++E A D++ E D
Sbjct: 2833 GNDKEIKEGNDKEIKEGDYKKFEEEIEKQIEEGNDKEIEEEIEKKIEEAN-DKKFEEGND 2891
Query: 378 EDDKRGDK--LNDGVADMELTLESEVK----ESKPEVDVGYEVS-KESSNLSFL--FEPP 428
++ K G++ +N+G D E+ E E K E++ +++ G + KE F E
Sbjct: 2892 KEIKEGNEKEINEG-NDKEIK-EGEYKKFEEETEKQIEEGNDKEIKEGEYKKFEEETEKQ 2949
Query: 429 VAEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKE 467
+ EG++ E+E K++E E+ ++ ++ K ++E
Sbjct: 2950 IEEGNDKEIEEE---IEKKIEEA-NEKKIKEENDKKFEE 2984
Score = 120 (47.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 72/339 (21%), Positives = 146/339 (43%)
Query: 145 LNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGV-SANELSGTRN----DGSHVHPMNP 199
+N+ E+ + K E EKE K +D + + E++ +N +G++
Sbjct: 2734 INEGNDKNFEKEIEKQSEEANEKEIKEGNDKIFEEGNYKEINEGKNKEFEEGNNKDVKEE 2793
Query: 200 ECAAVNESSSE-IKAENNKMGEKLDGAAVFYASAKKLS-GS-KTNGSLNQLECATADERP 256
+NE + E I N K ++ + + + KK G+ K N E D +
Sbjct: 2794 NEKEINEGNEEEINEGNEKEIKEGNEKEIKEGNDKKFEEGNDKEIKEGNDKEIKEGDYKK 2853
Query: 257 --SEVKAQNDEKREKLEDVSVDVSASKLYGTK-NDGIESHVLTLNQLEFAE-RSSDIKAK 312
E++ Q +E +K + ++ + K +G + + N+ E E +IK
Sbjct: 2854 FEEEIEKQIEEGNDKEIEEEIEKKIEEANDKKFEEGNDKEIKEGNEKEINEGNDKEIKEG 2913
Query: 313 NEEK-GEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDG-IHMHAKNQLESAAADE 370
+K E+++ I + ++K K + FE K + ND I + ++E A +E
Sbjct: 2914 EYKKFEEETEKQIEEGNDKEIKEGEYKKFEEETEKQIEEGNDKEIEEEIEKKIEEA--NE 2971
Query: 371 RSLETKDEDDKRGDKLNDGVADMELTLESEVKESKP-EVDVGYEVSKESSNLSFLFEPPV 429
+ + K+E+DK+ ++ ND +++ + EVK+ E + G + E N + E
Sbjct: 2972 KKI--KEENDKKFEEGND--KEVKEENDKEVKKGNDKEFEEGNDKKFEEGNDKEIKEGNE 3027
Query: 430 AEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKED 468
E E ++ + KE++ E+ ++ + K ++ED
Sbjct: 3028 KEIKEGNEKEIKEGNEKEIKEG-NEKEIKEGNDKNFEED 3065
Score = 72 (30.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 31/170 (18%), Positives = 67/170 (39%)
Query: 25 DVNMSDGETNVDVKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTA 84
+ N+SD TN D ++ E + ++DNI+ ++D + NN ++
Sbjct: 1701 EYNISDINTNKDQEEV-----ESKRIFETNDNINKHISSSDNNKINKMKQNNILINESQD 1755
Query: 85 DDVKVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPV---DVIAKENSSTKSDGSL 141
++ V+ +D++ N + + I +E + K+D ++
Sbjct: 1756 KNIDVHNKLDKILKNEHVTSDESLEKIKEENGNTRKNKGSINNEEKIEEEKENVKNDETI 1815
Query: 142 VHPLNQHEHVAAEE-RLTKIEAENGEKEEKLDDDSVVGVSANELSGTRND 190
+ + E+ +++ ++ KI EN K D+ S N GT +
Sbjct: 1816 IG--KKEENTESDDLKIQKISNENINKNILYTDNYNKDKSYNAQGGTHGE 1863
>UNIPROTKB|Q8IL45 [details] [associations]
symbol:TREP "TRAP-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
GenomeReviews:AE014187_GR RefSeq:XP_001348578.2
ProteinModelPortal:Q8IL45 EnsemblProtists:PF14_0404:mRNA
GeneID:811986 KEGG:pfa:PF14_0404 EuPathDB:PlasmoDB:PF3D7_1442600
Uniprot:Q8IL45
Length = 3543
Score = 132 (51.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 67/279 (24%), Positives = 126/279 (45%)
Query: 207 SSSEIKAENNKMGEKLDGAAVFYASAKKLSGS--KTNGSLNQLECATADERPSE---VKA 261
+ EIK NK + + + + K K + N+ E +++ E K
Sbjct: 2714 NEKEIKEGRNKEIRERNDKEINEGNDKNFEKEIEKQSEEANEKEIKEGNDKIFEEGNYKE 2773
Query: 262 QNDEKREKLEDVS-VDVSASKLYGTKNDGIESHVLTLNQLEFAE-RSSDIKAKNEEKGEK 319
N+ K ++ E+ + DV N+G E + N+ E E +IK N++K E+
Sbjct: 2774 INEGKNKEFEEGNNKDVKEENEKEI-NEGNEEEINEGNEKEIKEGNEKEIKEGNDKKFEE 2832
Query: 320 SDD-HISKNDEKREKLDDALVFEVSVNKLCDSKNDG-IHMHAKNQLESAAADERSLETKD 377
+D I + ++K K D FE + K + ND I + ++E A D++ E D
Sbjct: 2833 GNDKEIKEGNDKEIKEGDYKKFEEEIEKQIEEGNDKEIEEEIEKKIEEAN-DKKFEEGND 2891
Query: 378 EDDKRGDK--LNDGVADMELTLESEVK----ESKPEVDVGYEVS-KESSNLSFL--FEPP 428
++ K G++ +N+G D E+ E E K E++ +++ G + KE F E
Sbjct: 2892 KEIKEGNEKEINEG-NDKEIK-EGEYKKFEEETEKQIEEGNDKEIKEGEYKKFEEETEKQ 2949
Query: 429 VAEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKE 467
+ EG++ E+E K++E E+ ++ ++ K ++E
Sbjct: 2950 IEEGNDKEIEEE---IEKKIEEA-NEKKIKEENDKKFEE 2984
Score = 120 (47.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 72/339 (21%), Positives = 146/339 (43%)
Query: 145 LNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGV-SANELSGTRN----DGSHVHPMNP 199
+N+ E+ + K E EKE K +D + + E++ +N +G++
Sbjct: 2734 INEGNDKNFEKEIEKQSEEANEKEIKEGNDKIFEEGNYKEINEGKNKEFEEGNNKDVKEE 2793
Query: 200 ECAAVNESSSE-IKAENNKMGEKLDGAAVFYASAKKLS-GS-KTNGSLNQLECATADERP 256
+NE + E I N K ++ + + + KK G+ K N E D +
Sbjct: 2794 NEKEINEGNEEEINEGNEKEIKEGNEKEIKEGNDKKFEEGNDKEIKEGNDKEIKEGDYKK 2853
Query: 257 --SEVKAQNDEKREKLEDVSVDVSASKLYGTK-NDGIESHVLTLNQLEFAE-RSSDIKAK 312
E++ Q +E +K + ++ + K +G + + N+ E E +IK
Sbjct: 2854 FEEEIEKQIEEGNDKEIEEEIEKKIEEANDKKFEEGNDKEIKEGNEKEINEGNDKEIKEG 2913
Query: 313 NEEK-GEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDG-IHMHAKNQLESAAADE 370
+K E+++ I + ++K K + FE K + ND I + ++E A +E
Sbjct: 2914 EYKKFEEETEKQIEEGNDKEIKEGEYKKFEEETEKQIEEGNDKEIEEEIEKKIEEA--NE 2971
Query: 371 RSLETKDEDDKRGDKLNDGVADMELTLESEVKESKP-EVDVGYEVSKESSNLSFLFEPPV 429
+ + K+E+DK+ ++ ND +++ + EVK+ E + G + E N + E
Sbjct: 2972 KKI--KEENDKKFEEGND--KEVKEENDKEVKKGNDKEFEEGNDKKFEEGNDKEIKEGNE 3027
Query: 430 AEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKED 468
E E ++ + KE++ E+ ++ + K ++ED
Sbjct: 3028 KEIKEGNEKEIKEGNEKEIKEG-NEKEIKEGNDKNFEED 3065
Score = 72 (30.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 31/170 (18%), Positives = 67/170 (39%)
Query: 25 DVNMSDGETNVDVKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTA 84
+ N+SD TN D ++ E + ++DNI+ ++D + NN ++
Sbjct: 1701 EYNISDINTNKDQEEV-----ESKRIFETNDNINKHISSSDNNKINKMKQNNILINESQD 1755
Query: 85 DDVKVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPV---DVIAKENSSTKSDGSL 141
++ V+ +D++ N + + I +E + K+D ++
Sbjct: 1756 KNIDVHNKLDKILKNEHVTSDESLEKIKEENGNTRKNKGSINNEEKIEEEKENVKNDETI 1815
Query: 142 VHPLNQHEHVAAEE-RLTKIEAENGEKEEKLDDDSVVGVSANELSGTRND 190
+ + E+ +++ ++ KI EN K D+ S N GT +
Sbjct: 1816 IG--KKEENTESDDLKIQKISNENINKNILYTDNYNKDKSYNAQGGTHGE 1863
>UNIPROTKB|F1LMH4 [details] [associations]
symbol:Arid4b "AT-rich interactive domain-containing
protein 4B" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
InterPro:IPR002999 RGD:619919 GO:GO:0003677 GO:GO:0005622
SMART:SM00333 Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR012603
Pfam:PF08169 GeneTree:ENSGT00510000046413 IPI:IPI00202459
EMBL:AC131129 Ensembl:ENSRNOT00000022445 ArrayExpress:F1LMH4
Uniprot:F1LMH4
Length = 1226
Score = 143 (55.4 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 67/257 (26%), Positives = 112/257 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS +E+ +++D+ + K D AL F V +C +D
Sbjct: 146 NHIPEEESSSSSSDDDEDDRKQTDELLGKVVCVDYISLDKKKALWFPALV--VCPDCSDE 203
Query: 355 IHMHAKNQLESAAADER--SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPE-VDVG 411
I + N L + D + S+ KD + D A ++ + ++ K +
Sbjct: 204 IAVKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFDQALEFHKSRTIPAN 263
Query: 412 YEVS-KESSNLSFLFEPPVAEGDE------SGTEDEQVA-FAKEVENF----YR---ERN 456
++ KE S+ S E E DE S E+E++ F +E ENF Y+ +R
Sbjct: 264 WKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRG 323
Query: 457 LEF-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRI 515
K P +LNL KL+R V KLGG+D + S +W+QV + P + + +
Sbjct: 324 TPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKC 383
Query: 516 FYEKALLEYEKH-RMSN 531
Y+K L +E++ R +N
Sbjct: 384 AYKKYLYGFEEYCRSAN 400
Score = 133 (51.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 433 DESGTEDEQVA-FAKEVENF----YR---ERNLEF-KHPKFYKEDLNLLKLWRAVIKLGG 483
D S E+E++ F +E ENF Y+ +R K P +LNL KL+R V KLGG
Sbjct: 292 DNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGG 351
Query: 484 YDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKH-RMSN--GELPLHDGS 540
+D + S +W+QV + P + + + Y+K L +E++ R +N ++ L +
Sbjct: 352 FDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIDFQMALPEKV 411
Query: 541 LTEPSR 546
L +P +
Sbjct: 412 LNKPCK 417
>RGD|619919 [details] [associations]
symbol:Arid4b "AT rich interactive domain 4B (Rbp1 like)"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0034773 "histone H4-K20 trimethylation"
evidence=ISO] [GO:0036124 "histone H3-K9 trimethylation"
evidence=ISO] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 InterPro:IPR002999 RGD:619919 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG248805
HOGENOM:HOG000015398 HOVERGEN:HBG058247 InterPro:IPR012603
Pfam:PF08169 HSSP:Q14865 CTD:51742 EMBL:AF245512 IPI:IPI00202459
RefSeq:NP_445873.1 UniGene:Rn.47249 ProteinModelPortal:Q9JKB5
STRING:Q9JKB5 PRIDE:Q9JKB5 GeneID:84481 KEGG:rno:84481
UCSC:RGD:619919 NextBio:617002 ArrayExpress:Q9JKB5
Genevestigator:Q9JKB5 Uniprot:Q9JKB5
Length = 1228
Score = 143 (55.4 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 67/257 (26%), Positives = 112/257 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS +E+ +++D+ + K D AL F V +C +D
Sbjct: 147 NHIPEEESSSSSSDDDEDDRKQTDELLGKVVCVDYISLDKKKALWFPALV--VCPDCSDE 204
Query: 355 IHMHAKNQLESAAADER--SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPE-VDVG 411
I + N L + D + S+ KD + D A ++ + ++ K +
Sbjct: 205 IAVKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFDQALEFHKSRTIPAN 264
Query: 412 YEVS-KESSNLSFLFEPPVAEGDE------SGTEDEQVA-FAKEVENF----YR---ERN 456
++ KE S+ S E E DE S E+E++ F +E ENF Y+ +R
Sbjct: 265 WKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRG 324
Query: 457 LEF-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRI 515
K P +LNL KL+R V KLGG+D + S +W+QV + P + + +
Sbjct: 325 TPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKC 384
Query: 516 FYEKALLEYEKH-RMSN 531
Y+K L +E++ R +N
Sbjct: 385 AYKKYLYGFEEYCRSAN 401
Score = 133 (51.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 433 DESGTEDEQVA-FAKEVENF----YR---ERNLEF-KHPKFYKEDLNLLKLWRAVIKLGG 483
D S E+E++ F +E ENF Y+ +R K P +LNL KL+R V KLGG
Sbjct: 293 DNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGG 352
Query: 484 YDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKH-RMSN--GELPLHDGS 540
+D + S +W+QV + P + + + Y+K L +E++ R +N ++ L +
Sbjct: 353 FDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIDFQMALPEKV 412
Query: 541 LTEPSR 546
L +P +
Sbjct: 413 LNKPCK 418
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 143 (55.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 92/429 (21%), Positives = 166/429 (38%)
Query: 46 EKNQDDMSSDNIDLQTDNNDVMSVGLPSDNN---GSVDNQTADDVKVNTNVDRLYGNHXX 102
EK DD D +T+ + SV DN+ G DN D+ + + G
Sbjct: 1076 EKMDDDDDEDVKGHETEREEKESVAEEEDNSEGCGKKDNAFEDEPEGESENAPKGGEDSE 1135
Query: 103 XXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLNQHEHVAAEERLTKI-E 161
G + + S G + E EE T+ +
Sbjct: 1136 EEEGEEEESDAVGQEENGDDGGKSSEIEGEKSKGGSGDMAESEEVEESEGQEEGETEDKD 1195
Query: 162 AENGEKE-EKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGE 220
AE+ E+E E D+DS + E + +G + PE S SE ++N++ E
Sbjct: 1196 AEDEEEERESEDEDSERQIEDEEKTDAE-EGESSNEGEPE-----RSESEDVSKNDRSDE 1249
Query: 221 KLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKREKLEDVSVDVSAS 280
+ +G + S ++ G + E DE E + +N K E+ E+ + ++
Sbjct: 1250 E-EGESEENGSEREEEEDVLEGEQEESEVGNEDEENQEEEEENQTKEEEEEENNEEMKEE 1308
Query: 281 KLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVF 340
++++G ES V + E E + ++G D+ I + DE+ EK
Sbjct: 1309 N--SSEDEGEES-VREKEEQEVEEEKLSEEGSERQEG---DEQIEEEDEEGEKEGKMKSS 1362
Query: 341 EVSVNKLCDSKNDGIHMHAKNQLESAAA--DERSLETKDEDDKRGDK-----LNDGVADM 393
EV K +++ D + +N + + + +E ET+ ++++ G K +G +
Sbjct: 1363 EV---KFREAETDDEENNEENTEDKSGSGEEEDDDETEKQEERHGRKDRETEEEEGGEEE 1419
Query: 394 ELTLE----SEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVE 449
E E SE +E E + E ++++S + E E+ E+E+ A+ E
Sbjct: 1420 EEEAEQKDTSEEEEQAEESEEEEEETEQNSGKTRETSEEEEEQQENEEEEEEEEEAEWKE 1479
Query: 450 NFYRERNLE 458
RE N E
Sbjct: 1480 KKQRESNEE 1488
>GENEDB_PFALCIPARUM|PFL0465c [details] [associations]
symbol:PFL0465c "Zinc finger transcription
factor (krox1)" species:5833 "Plasmodium falciparum" [GO:0003677
"DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.160.60 EMBL:AE014188 RefSeq:XP_001350502.1
ProteinModelPortal:Q7KQK4 IntAct:Q7KQK4 MINT:MINT-1574904
EnsemblProtists:PFL0465c:mRNA GeneID:811146 KEGG:pfa:PFL0465c
EuPathDB:PlasmoDB:PF3D7_1209300 OMA:DKRSEGD ProtClustDB:CLSZ2515385
Uniprot:Q7KQK4
Length = 1461
Score = 142 (55.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 100/451 (22%), Positives = 185/451 (41%)
Query: 39 DPPFSIPEKNQD--DMSSDNI-DLQTDNNDV-MSVGLPSDN-NGSVDNQTADDVKVNTNV 93
D P + EKN+D + SSD D+Q N+D+ + VG N + DD +N+
Sbjct: 561 DYP-KLDEKNEDNYEQSSDEYHDIQKVNDDINVQVGSNHINLKEKYKGEIGDDYGINSEN 619
Query: 94 DRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLNQHEHVAA 153
+R G++ +N + + S +S+G ++
Sbjct: 620 ER--GSYSDSRSASYRSESYRSE----SNRRSESDGRSESDGRSEGDRRSESDRRSE--G 671
Query: 154 EERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNESSSEIKA 213
++R + G+K + D S S+N+ NDG+ E + V+E SS + +
Sbjct: 672 DKRSEGDKRSEGDKRSESDKKSESDKSSNDDDKRSNDGN---TSESERSEVSEKSSYVSS 728
Query: 214 ENNKMG----EKLDGAAV-FYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKRE 268
E K E + F+ KK K N + ++ + + R SE + +++ +R
Sbjct: 729 EKPKKRPYFYENVSSKITGFFFQVKK----KINKNNDEDDDYSESRRSSESRQRSESRRS 784
Query: 269 KLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKND 328
+ S DVS K+D S ++ A R SD+ +K ++ KSD SK D
Sbjct: 785 NVSRRS-DVSKKDDMSVKSDA--SRRSDASRRSDASRRSDV-SKKDDISAKSD--ASKKD 838
Query: 329 EKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAA----ADERS-LETKDEDDKRG 383
+ K D + +VS ++D ++ A+ A RS + KD+ +
Sbjct: 839 DISAKSDVSRRSDVSRRSDASRRSDASRRSDASRRSDASRRSDASRRSDVSKKDDISAKS 898
Query: 384 D--KLNDGVADMELTLESEVK-----ESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESG 436
D K +D A +++ S+V ++ +V EVS+ S+ + L + + +E+
Sbjct: 899 DASKKDDISAKSDVSRRSDVSIRNDISARSDVSRKSEVSRRSNVTNKLSDRENEKNEETK 958
Query: 437 TEDEQVAFAKEVENFYRE-RNLEFKHPKFYK 466
+ V +V + +++ N E + K K
Sbjct: 959 LSEIDVT---QVNDIHKDITNKEEDNEKIIK 986
>UNIPROTKB|Q7KQK4 [details] [associations]
symbol:PFL0465c "Zinc finger transcription factor (Krox1)"
species:36329 "Plasmodium falciparum 3D7" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.160.60 EMBL:AE014188 RefSeq:XP_001350502.1
ProteinModelPortal:Q7KQK4 IntAct:Q7KQK4 MINT:MINT-1574904
EnsemblProtists:PFL0465c:mRNA GeneID:811146 KEGG:pfa:PFL0465c
EuPathDB:PlasmoDB:PF3D7_1209300 OMA:DKRSEGD ProtClustDB:CLSZ2515385
Uniprot:Q7KQK4
Length = 1461
Score = 142 (55.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 100/451 (22%), Positives = 185/451 (41%)
Query: 39 DPPFSIPEKNQD--DMSSDNI-DLQTDNNDV-MSVGLPSDN-NGSVDNQTADDVKVNTNV 93
D P + EKN+D + SSD D+Q N+D+ + VG N + DD +N+
Sbjct: 561 DYP-KLDEKNEDNYEQSSDEYHDIQKVNDDINVQVGSNHINLKEKYKGEIGDDYGINSEN 619
Query: 94 DRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLNQHEHVAA 153
+R G++ +N + + S +S+G ++
Sbjct: 620 ER--GSYSDSRSASYRSESYRSE----SNRRSESDGRSESDGRSEGDRRSESDRRSE--G 671
Query: 154 EERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNESSSEIKA 213
++R + G+K + D S S+N+ NDG+ E + V+E SS + +
Sbjct: 672 DKRSEGDKRSEGDKRSESDKKSESDKSSNDDDKRSNDGN---TSESERSEVSEKSSYVSS 728
Query: 214 ENNKMG----EKLDGAAV-FYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKRE 268
E K E + F+ KK K N + ++ + + R SE + +++ +R
Sbjct: 729 EKPKKRPYFYENVSSKITGFFFQVKK----KINKNNDEDDDYSESRRSSESRQRSESRRS 784
Query: 269 KLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKND 328
+ S DVS K+D S ++ A R SD+ +K ++ KSD SK D
Sbjct: 785 NVSRRS-DVSKKDDMSVKSDA--SRRSDASRRSDASRRSDV-SKKDDISAKSD--ASKKD 838
Query: 329 EKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAA----ADERS-LETKDEDDKRG 383
+ K D + +VS ++D ++ A+ A RS + KD+ +
Sbjct: 839 DISAKSDVSRRSDVSRRSDASRRSDASRRSDASRRSDASRRSDASRRSDVSKKDDISAKS 898
Query: 384 D--KLNDGVADMELTLESEVK-----ESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESG 436
D K +D A +++ S+V ++ +V EVS+ S+ + L + + +E+
Sbjct: 899 DASKKDDISAKSDVSRRSDVSIRNDISARSDVSRKSEVSRRSNVTNKLSDRENEKNEETK 958
Query: 437 TEDEQVAFAKEVENFYRE-RNLEFKHPKFYK 466
+ V +V + +++ N E + K K
Sbjct: 959 LSEIDVT---QVNDIHKDITNKEEDNEKIIK 986
>ZFIN|ZDB-GENE-020604-1 [details] [associations]
symbol:myhz2 "myosin, heavy polypeptide 2, fast
muscle specific" species:7955 "Danio rerio" [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006950 "response to
stress" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-020604-1 GO:GO:0005524 GO:GO:0006950 GO:GO:0003774
GO:GO:0016459 HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959 HSSP:P24733
GeneTree:ENSGT00680000099788 UniGene:Dr.121240 EMBL:BX511237
EMBL:BC071279 IPI:IPI00933204 RefSeq:NP_694514.2 SMR:Q6IQX1
STRING:Q6IQX1 Ensembl:ENSDART00000051361 Ensembl:ENSDART00000126873
GeneID:246275 KEGG:dre:246275 CTD:246275 InParanoid:Q6IQX1
NextBio:20797215 Uniprot:Q6IQX1
Length = 1935
Score = 142 (55.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 73/332 (21%), Positives = 145/332 (43%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVN 205
+ + V +E L K EA+ E EEK+ + N+L ++ ++ C +
Sbjct: 855 KEDFVKCKEALAKAEAKKKELEEKM---VALLQEKNDLQLAVASESENLSDAEERCEGLI 911
Query: 206 ESSSEIKAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEV 259
+S +++A+ + E+L+ A A +KL S+ ++ LE A +
Sbjct: 912 KSKIQLEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKH 971
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK 319
+N K E S D S +KL K E+H TL+ L+ E + K++ K E+
Sbjct: 972 ATENKVKNLTEEMASQDESIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKSKTKLEQ 1031
Query: 320 SDDHI--SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADE 370
D + S EK+ ++D +++ + D +ND ++ +++ +
Sbjct: 1032 QVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLEND--KQQSEEKIKKKDFET 1089
Query: 371 RSLETKDEDDKR-GDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
L +K ED++ G +L + +++ +E +E + E +V K+ ++LS E
Sbjct: 1090 AQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEIS 1149
Query: 430 AEGDESG-TEDEQVAFAKEVENFYRE--RNLE 458
+E+G Q+ K+ E +++ R+LE
Sbjct: 1150 ERLEEAGGATAAQIEMNKKREAEFQKLRRDLE 1181
>TAIR|locus:2037863 [details] [associations]
symbol:MBD10 "methyl-CPG-binding domain 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008327 "methyl-CpG binding"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001739 InterPro:IPR016177 Pfam:PF01429 PROSITE:PS50982
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 EMBL:AC007591 SUPFAM:SSF54171
Gene3D:3.30.890.10 GO:GO:0008327 EMBL:AY094439 EMBL:BT020367
EMBL:AK230256 IPI:IPI00519005 IPI:IPI00785822 PIR:G86287
RefSeq:NP_001185003.1 RefSeq:NP_563971.1 UniGene:At.27594
UniGene:At.70811 ProteinModelPortal:Q9XI36 SMR:Q9XI36 STRING:Q9XI36
PaxDb:Q9XI36 PRIDE:Q9XI36 ProMEX:Q9XI36 EnsemblPlants:AT1G15340.1
GeneID:838103 KEGG:ath:AT1G15340 TAIR:At1g15340 eggNOG:NOG328305
HOGENOM:HOG000120681 InParanoid:Q9XI36 OMA:KKESMEV
ProtClustDB:CLSN2917009 Genevestigator:Q9XI36 Uniprot:Q9XI36
Length = 384
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/275 (22%), Positives = 112/275 (40%)
Query: 127 VIAKENSS-TKSDGSLVHPLNQHEHVAAEERLTKI-EAENGEKEEKLDDDSVVGVSANEL 184
++ K SS TK D N+ V + K + EN E E++ + + V ++ E
Sbjct: 97 LLKKRRSSLTKKDNKEAAEKNEEAAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEK 156
Query: 185 SGTRNDGSHVHPMNPE---CAAVNESSSEI-KAENNKMGEKLDGA---AVFYASAKKLSG 237
+ + +N E A E +EI +AE K GEK + A K+
Sbjct: 157 ENNEGEKTEAEKVNKEGEKTEAGKEGQTEIAEAEKEKEGEKAEAENKEAEVVRDKKESME 216
Query: 238 SKTNGSLNQLECATADERPSEVKAQNDEKREKLEDVSVDVSASKLYG---TKNDG-IESH 293
T+ + E PS+V+ D + ++ ++V + K T+N G + +
Sbjct: 217 VDTSELEKKAGSGEGAEEPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTE 276
Query: 294 VLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKNDE-KREKLDDALVFEVSVNKLCDSKN 352
+ E + D A+ +KG++S ++ K E + K +D + + +K
Sbjct: 277 ANGEQNVTLGEPNLDADAE-ADKGKESKEYDEKTTEAEANKENDTQESDEKKTEAAANKE 335
Query: 353 DGIHMHAKNQLESAAADERSLETKDEDDKRGDKLN 387
+ + E+A A+E+S + K ED R + N
Sbjct: 336 NETQESDVKKTEAAVAEEKSNDMKAEDTNRSLEAN 370
>GENEDB_PFALCIPARUM|PF14_0201 [details] [associations]
symbol:PF14_0201 "surface protein, putative,
Pf113" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014187 GenomeReviews:AE014187_GR
RefSeq:XP_001348374.1 ProteinModelPortal:Q8ILP3 IntAct:Q8ILP3
MINT:MINT-1573265 PRIDE:Q8ILP3 EnsemblProtists:PF14_0201:mRNA
GeneID:811782 KEGG:pfa:PF14_0201 EuPathDB:PlasmoDB:PF3D7_1420700
HOGENOM:HOG000281296 ProtClustDB:CLSZ2446712 Uniprot:Q8ILP3
Length = 969
Score = 126 (49.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 59/256 (23%), Positives = 114/256 (44%)
Query: 161 EAENGEKEEKL---DDDSVVGVSANE-LSGTRNDGSHVHPMN-----PECAAVNESSSEI 211
E E +++++L ++D V+ S NE T +D +H P ++S E
Sbjct: 704 EQEQPKQDDQLLNNNNDDVLSESNNENKEKTSDDATHKETQEKSDQEPSQNIQEDNSDEK 763
Query: 212 KAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKREKLE 271
AEN + E+++ + +S + + + ++ T DE E++ QNDE E L
Sbjct: 764 HAENEENVEQIE-------TDSNVSEEANDENKDNMQ-TTTDEGTEELQ-QNDEDAESLT 814
Query: 272 DVSVDVSASKLYGTKN-DGIESHVLTLNQLEFAERSSDIKAKNEEKGE-KSDDHISKNDE 329
+ SK +N D ++ + ++E E+ D + K+E+K + + +D +N
Sbjct: 815 KEN-----SKSEEQENEDSTDAEAIDKEEVETEEKGKDEQKKDEQKEQDEEEDGEKENKH 869
Query: 330 KREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDKRGD-KLND 388
K + + V ++ NK + K + H+ Q A+ + ETK+ +DK ND
Sbjct: 870 KSSETTNETVTDIEENKN-EVKGEE-HLQGSEQSIEASESSQKDETKETEDKEEYVNAND 927
Query: 389 GVADMELTLESEVKES 404
+ E T +E ++
Sbjct: 928 DESSEEDTTPNETNKT 943
Score = 62 (26.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 48 NQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTADDVKVNTNVDRLYGN 99
N ++ ++D+ D Q ++ DV S +++N +++ +++DV N N D L N
Sbjct: 276 NNNNNNNDDQDEQGNDGDVTSSMNKNEDNKDLEHGSSNDV--NNNTDTLVNN 325
Score = 51 (23.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 49 QDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTADDVKVNTN 92
QD S++ + + + +D N + DN++ DDV N N
Sbjct: 236 QDSTSNEQDENVKGMSSSQEMNSNNDENKNQDNESDDDVNNNNN 279
>UNIPROTKB|Q8ILP3 [details] [associations]
symbol:Pf113 "Surface protein, Pf113" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014187 GenomeReviews:AE014187_GR RefSeq:XP_001348374.1
ProteinModelPortal:Q8ILP3 IntAct:Q8ILP3 MINT:MINT-1573265
PRIDE:Q8ILP3 EnsemblProtists:PF14_0201:mRNA GeneID:811782
KEGG:pfa:PF14_0201 EuPathDB:PlasmoDB:PF3D7_1420700
HOGENOM:HOG000281296 ProtClustDB:CLSZ2446712 Uniprot:Q8ILP3
Length = 969
Score = 126 (49.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 59/256 (23%), Positives = 114/256 (44%)
Query: 161 EAENGEKEEKL---DDDSVVGVSANE-LSGTRNDGSHVHPMN-----PECAAVNESSSEI 211
E E +++++L ++D V+ S NE T +D +H P ++S E
Sbjct: 704 EQEQPKQDDQLLNNNNDDVLSESNNENKEKTSDDATHKETQEKSDQEPSQNIQEDNSDEK 763
Query: 212 KAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKREKLE 271
AEN + E+++ + +S + + + ++ T DE E++ QNDE E L
Sbjct: 764 HAENEENVEQIE-------TDSNVSEEANDENKDNMQ-TTTDEGTEELQ-QNDEDAESLT 814
Query: 272 DVSVDVSASKLYGTKN-DGIESHVLTLNQLEFAERSSDIKAKNEEKGE-KSDDHISKNDE 329
+ SK +N D ++ + ++E E+ D + K+E+K + + +D +N
Sbjct: 815 KEN-----SKSEEQENEDSTDAEAIDKEEVETEEKGKDEQKKDEQKEQDEEEDGEKENKH 869
Query: 330 KREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDKRGD-KLND 388
K + + V ++ NK + K + H+ Q A+ + ETK+ +DK ND
Sbjct: 870 KSSETTNETVTDIEENKN-EVKGEE-HLQGSEQSIEASESSQKDETKETEDKEEYVNAND 927
Query: 389 GVADMELTLESEVKES 404
+ E T +E ++
Sbjct: 928 DESSEEDTTPNETNKT 943
Score = 62 (26.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 48 NQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTADDVKVNTNVDRLYGN 99
N ++ ++D+ D Q ++ DV S +++N +++ +++DV N N D L N
Sbjct: 276 NNNNNNNDDQDEQGNDGDVTSSMNKNEDNKDLEHGSSNDV--NNNTDTLVNN 325
Score = 51 (23.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 49 QDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTADDVKVNTN 92
QD S++ + + + +D N + DN++ DDV N N
Sbjct: 236 QDSTSNEQDENVKGMSSSQEMNSNNDENKNQDNESDDDVNNNNN 279
>UNIPROTKB|H3BQ92 [details] [associations]
symbol:ARID3B "AT-rich interactive domain-containing
protein 3B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC100835
HGNC:HGNC:14350 Ensembl:ENST00000566147 Bgee:H3BQ92 Uniprot:H3BQ92
Length = 138
Score = 111 (44.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/143 (30%), Positives = 67/143 (46%)
Query: 466 KEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE 525
K+ L+L L++ V + GG E+ + K+WR++ + N P + T+ ++T R Y K L YE
Sbjct: 3 KQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYE 62
Query: 526 --KHRMSN-GELPLH-DGSLTEPSRIESQAAGSQAFGSGXXXXXXXXXXMQGWHSKRLLG 581
K +S+ EL DG+ E R + S FG G + LL
Sbjct: 63 CEKKALSSPAELQAAIDGNRREGRR---PSYSSSLFGYSPAAATAAAAA--G--APALLS 115
Query: 582 SGEVCQPIIKEKNSSCT-TKSDR 603
++ PI+ +SS T T S R
Sbjct: 116 PPKIRFPILGLGSSSGTNTSSPR 138
>ZFIN|ZDB-GENE-060531-50 [details] [associations]
symbol:myha "myosin, heavy chain a" species:7955
"Danio rerio" [GO:0016459 "myosin complex" evidence=IEA]
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-060531-50 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099788 EMBL:BX510649 EMBL:BX511237
IPI:IPI00500057 RefSeq:XP_001924009.1 Ensembl:ENSDART00000139917
GeneID:100149148 KEGG:dre:100149148 OMA:DYNVSGW NextBio:20792773
ArrayExpress:F1R6C7 Uniprot:F1R6C7
Length = 1933
Score = 141 (54.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 73/332 (21%), Positives = 145/332 (43%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVN 205
+ + V +E L K EA+ E EEK+ + N+L ++ ++ C +
Sbjct: 853 KEDFVKCKEDLVKAEAKKKELEEKM---VALLQEKNDLQLAVASEAENLSDAEERCEGLI 909
Query: 206 ESSSEIKAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEV 259
+S +++A+ + E+L+ A A +KL S+ ++ LE A +
Sbjct: 910 KSKIQLEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKH 969
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK 319
+N K E S D S +KL K E+H TL+ L+ E + K++ K E+
Sbjct: 970 ATENKVKNLTEEMASQDESIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKSKTKLEQ 1029
Query: 320 SDDHI--SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADE 370
D + S EK+ ++D +++ + D +ND ++ +++ +
Sbjct: 1030 QVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLEND--KQQSEEKIKKKDFET 1087
Query: 371 RSLETKDEDDKR-GDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
L +K ED++ G +L + +++ +E +E + E +V K+ ++LS E
Sbjct: 1088 SQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEIS 1147
Query: 430 AEGDESG-TEDEQVAFAKEVENFYRE--RNLE 458
+E+G Q+ K+ E +++ R+LE
Sbjct: 1148 ERLEEAGGATAAQIEMNKKREAEFQKLRRDLE 1179
>ZFIN|ZDB-GENE-030131-6206 [details] [associations]
symbol:myhc4 "myosin heavy chain 4" species:7955
"Danio rerio" [GO:0016459 "myosin complex" evidence=IEA]
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-030131-6206 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099788 EMBL:BX511237 IPI:IPI00934435
Ensembl:ENSDART00000051362 Bgee:F1Q5K4 Uniprot:F1Q5K4
Length = 1937
Score = 141 (54.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 73/332 (21%), Positives = 145/332 (43%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVN 205
+ + V +E L K EA+ E EEK+ + N+L ++ ++ C +
Sbjct: 857 KEDFVKCKEDLVKAEAKKKELEEKM---VALLQEKNDLQLAVASEAENLSDAEERCEGLI 913
Query: 206 ESSSEIKAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEV 259
+S +++A+ + E+L+ A A +KL S+ ++ LE A +
Sbjct: 914 KSKIQLEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKH 973
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK 319
+N K E S D S +KL K E+H TL+ L+ E + K++ K E+
Sbjct: 974 ATENKVKNLTEEMASQDESIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKSKTKLEQ 1033
Query: 320 SDDHI--SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADE 370
D + S EK+ ++D +++ + D +ND ++ +++ +
Sbjct: 1034 QVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLEND--KQQSEEKIKKKDFET 1091
Query: 371 RSLETKDEDDKR-GDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
L +K ED++ G +L + +++ +E +E + E +V K+ ++LS E
Sbjct: 1092 AQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEIS 1151
Query: 430 AEGDESG-TEDEQVAFAKEVENFYRE--RNLE 458
+E+G Q+ K+ E +++ R+LE
Sbjct: 1152 ERLEEAGGATAAQIEMNKKREAEFQKLRRDLE 1183
>UNIPROTKB|F1NIM8 [details] [associations]
symbol:F1NIM8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR012603 Pfam:PF08169
GeneTree:ENSGT00510000046413 EMBL:AADN02051930 EMBL:AADN02051931
EMBL:AADN02051932 EMBL:AADN02051933 EMBL:AADN02051934
EMBL:AADN02051935 IPI:IPI00814389 Ensembl:ENSGALT00000023152
ArrayExpress:F1NIM8 Uniprot:F1NIM8
Length = 1101
Score = 138 (53.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 67/250 (26%), Positives = 109/250 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS ++E+ ++SD+ + K D L F V +C +D
Sbjct: 56 NHIPEEESSSSSSDEDEDDRKQSDELLGKVVCVDCFSVDKKKTLWFPALV--VCPDCSDD 113
Query: 355 IHMHAKNQLESAAADER--SLETKD--EDDKRGDKLNDGVADMELTLESEVKESKPEVDV 410
I + N L + D + S+ KD E + K D + E +++K V
Sbjct: 114 IAVKKDNILVRSFKDGKFVSVPRKDVREISETSPK-PDALLKQAFDQALEFRKNKT-VPS 171
Query: 411 GYEVS-KESSNLSFLFEPPVAEG---DESGTEDEQVA-FAKEVENF----YR---ERNLE 458
++ KE S+ S E E D S E+E++ F +E ENF Y+ +R
Sbjct: 172 NWKTELKEDSSSSEAEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTP 231
Query: 459 F-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFY 517
K P +LNL KL+R V KLGG+D + S +W+QV + P + + + Y
Sbjct: 232 INKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAY 291
Query: 518 EKALLEYEKH 527
+K L +E++
Sbjct: 292 KKYLYGFEEY 301
>UNIPROTKB|F1NK39 [details] [associations]
symbol:F1NK39 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR016197 InterPro:IPR012603 InterPro:IPR025995
Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160 OMA:FRLVHKL
GeneTree:ENSGT00510000046413 EMBL:AADN02051930 EMBL:AADN02051931
EMBL:AADN02051932 EMBL:AADN02051933 EMBL:AADN02051934
EMBL:AADN02051935 IPI:IPI00595162 Ensembl:ENSGALT00000000385
ArrayExpress:F1NK39 Uniprot:F1NK39
Length = 1184
Score = 138 (53.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 67/250 (26%), Positives = 109/250 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS ++E+ ++SD+ + K D L F V +C +D
Sbjct: 56 NHIPEEESSSSSSDEDEDDRKQSDELLGKVVCVDCFSVDKKKTLWFPALV--VCPDCSDD 113
Query: 355 IHMHAKNQLESAAADER--SLETKD--EDDKRGDKLNDGVADMELTLESEVKESKPEVDV 410
I + N L + D + S+ KD E + K D + E +++K V
Sbjct: 114 IAVKKDNILVRSFKDGKFVSVPRKDVREISETSPK-PDALLKQAFDQALEFRKNKT-VPS 171
Query: 411 GYEVS-KESSNLSFLFEPPVAEG---DESGTEDEQVA-FAKEVENF----YR---ERNLE 458
++ KE S+ S E E D S E+E++ F +E ENF Y+ +R
Sbjct: 172 NWKTELKEDSSSSEAEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTP 231
Query: 459 F-KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFY 517
K P +LNL KL+R V KLGG+D + S +W+QV + P + + + Y
Sbjct: 232 INKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAY 291
Query: 518 EKALLEYEKH 527
+K L +E++
Sbjct: 292 KKYLYGFEEY 301
>ZFIN|ZDB-GENE-070705-74 [details] [associations]
symbol:myhz1.3 "myosin, heavy polypeptide 1.3,
skeletal muscle" species:7955 "Danio rerio" [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-070705-74 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
HOVERGEN:HBG004704 InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099788 EMBL:BX510649 UniGene:Dr.121240
IPI:IPI00858466 RefSeq:XP_001924014.2 UniGene:Dr.75130
STRING:B8A569 Ensembl:ENSDART00000122889 GeneID:100008070
KEGG:dre:100008070 CTD:100008070 OMA:ANIQHET NextBio:20787735
Uniprot:B8A569
Length = 1937
Score = 140 (54.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 73/332 (21%), Positives = 144/332 (43%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVN 205
+ + V +E L K EA+ E EEK+ + N+L ++ ++ C +
Sbjct: 855 KEDFVKCKEALAKAEAKKKELEEKM---VALLQEKNDLQLAVASESENLSDAEERCEGLI 911
Query: 206 ESSSEIKAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEV 259
+S +++A+ + E+L+ A A +KL S+ ++ LE A +
Sbjct: 912 KSKIQLEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKH 971
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK 319
+N K E + D S KL K E+H TL+ L+ E + K++ K E+
Sbjct: 972 ATENKVKNLTEEMAAQDESIGKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKSKTKLEQ 1031
Query: 320 SDDHI--SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADE 370
D + S EK+ ++D +++ + D +ND ++ +L+ +
Sbjct: 1032 QVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLEND--KQQSEEKLKKKDFET 1089
Query: 371 RSLETKDEDDKR-GDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
L +K ED++ G +L + +++ +E +E + E +V K+ ++LS E
Sbjct: 1090 SQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEIS 1149
Query: 430 AEGDESG-TEDEQVAFAKEVENFYRE--RNLE 458
+E+G Q+ K+ E +++ R+LE
Sbjct: 1150 ERLEEAGGATAAQIEMNKKREAEFQKLRRDLE 1181
>UNIPROTKB|F1MNB5 [details] [associations]
symbol:ARID4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 OMA:FRLVHKL GeneTree:ENSGT00510000046413
EMBL:DAAA02061466 EMBL:DAAA02061464 EMBL:DAAA02061465
IPI:IPI00705177 Ensembl:ENSBTAT00000061477 Uniprot:F1MNB5
Length = 1319
Score = 138 (53.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 64/253 (25%), Positives = 111/253 (43%)
Query: 298 NQLEFAERSSDIKAKNEEKGEKSDDHISKN---DEKREKLDDALVFEVSVNKLCDSKNDG 354
N + E SS ++E+ ++ D+ + K D AL F V +C +D
Sbjct: 147 NHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKALWFPALV--VCPDCSDE 204
Query: 355 IHMHAKNQLESAAADER--SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPE-VDVG 411
I + N L + D + S+ KD + D + A ++ + ++ K +
Sbjct: 205 IAVKKDNILVRSFKDGKFTSVPRKDVHEITSDTVPKPDAVLKQAFDQALEFHKSRTIPAN 264
Query: 412 YEVS-KESSNLSFLFEPPVAEGDE------SGTEDEQVA-FAKEVENFYRE--RNLEF-- 459
++ KE S+ S E E DE S E+E++ F +E ENF ++ + +E
Sbjct: 265 WKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRV 324
Query: 460 -----KHPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFR 514
K P +LNL KL+R V KLGG+D + S +W+QV + P + + +
Sbjct: 325 GTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVK 384
Query: 515 IFYEKALLEYEKH 527
Y+K L +E++
Sbjct: 385 CAYKKYLYGFEEY 397
Score = 129 (50.5 bits), Expect = 0.00028, P = 0.00028
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 433 DESGTEDEQVA-FAKEVENFYRE--RNLEF-------KHPKFYKEDLNLLKLWRAVIKLG 482
D S E+E++ F +E ENF ++ + +E K P +LNL KL+R V KLG
Sbjct: 293 DNSSEEEEEIEPFPEERENFLQQLYKFMEDRVGTPINKRPVLGYRNLNLFKLFRLVHKLG 352
Query: 483 GYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKH-RMSNGELPL 536
G+D + S +W+QV + P + + + Y+K L +E++ R +N E +
Sbjct: 353 GFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQM 407
>UNIPROTKB|F1NL47 [details] [associations]
symbol:ARID3B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
InterPro:IPR023334 PROSITE:PS51486 EMBL:AADN02051006
EMBL:AADN02051007 IPI:IPI00585316 Ensembl:ENSGALT00000002097
OMA:IRINGRX Uniprot:F1NL47
Length = 559
Score = 119 (46.9 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 434 ESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKL 492
E ++ E+ F ++ F ++R P K+ L+L L++ V + GG E+ + K+
Sbjct: 219 ELDSDPERKEFLDDLFIFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI 278
Query: 493 WRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE---KHRMSNGELPLH-DGSLTEPSR 546
WR++ + N P + T+ ++T R Y K L YE K S EL DG+ E R
Sbjct: 279 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKSLSSPAELQAAIDGNRREGRR 336
Score = 57 (25.1 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 23/137 (16%), Positives = 52/137 (37%)
Query: 205 NESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQND 264
+E E E + + D SA K + NQ +T++ P+ +
Sbjct: 100 DEEEEEAGLEGGDLEDAADVTGKESCSALKYFHAPKVAHHNQRVASTSNPLPASGHQRGQ 159
Query: 265 E-KREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDH 323
+ K E+ +D + A G +N ++ + + +++ + + +
Sbjct: 160 QGKEEQGKDTTKQPYAGSPSGRQNWRLDEQLKQNGNVTWSDEGDGCRGREISRDFAKLYE 219
Query: 324 ISKNDEKREKLDDALVF 340
+ + E++E LDD +F
Sbjct: 220 LDSDPERKEFLDDLFIF 236
Score = 45 (20.9 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 133 SSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDD 174
S + GS V PL + A R + N E EE+ ++D
Sbjct: 53 SGRAAGGSAVGPLARGPPAAGATRAFDQSSMNSEPEEEEEED 94
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 161 EAENGEKEEKLDDDSVVGVSANEL 184
E E E+EE+ +++ G+ +L
Sbjct: 90 EEEEDEEEEEDEEEEEAGLEGGDL 113
>ZFIN|ZDB-GENE-070705-73 [details] [associations]
symbol:myhz1.2 "myosin, heavy polypeptide 1.2,
skeletal muscle" species:7955 "Danio rerio" [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-070705-73 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
HOVERGEN:HBG004704 InterPro:IPR015650 PANTHER:PTHR13140:SF22
HOGENOM:HOG000173959 OrthoDB:EOG43N7BR GeneTree:ENSGT00680000099788
EMBL:BX510649 IPI:IPI00773363 UniGene:Dr.104477 UniGene:Dr.121240
Ensembl:ENSDART00000098067 Ensembl:ENSDART00000131983 OMA:VTRINEM
Uniprot:B8A561
Length = 1937
Score = 139 (54.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 73/332 (21%), Positives = 144/332 (43%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVN 205
+ + V +E L K EA+ E EEK+ + N+L ++ ++ C +
Sbjct: 855 KEDFVKCKEDLAKAEAKKKELEEKM---VALLQEKNDLQLAVASESENLSDAEERCEGLI 911
Query: 206 ESSSEIKAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEV 259
+S +++A+ + E+L+ A A +KL S+ ++ LE A +
Sbjct: 912 KSKIQLEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKH 971
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK 319
+N K E + D S KL K E+H TL+ L+ E + K++ K E+
Sbjct: 972 ATENKVKNLTEEMAAQDESIGKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKSKTKLEQ 1031
Query: 320 SDDHI--SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADE 370
D + S EK+ ++D +++ + D +ND ++ +L+ +
Sbjct: 1032 QVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLEND--KQQSEEKLKKKDFET 1089
Query: 371 RSLETKDEDDKR-GDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
L +K ED++ G +L + +++ +E +E + E +V K+ ++LS E
Sbjct: 1090 SQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEIS 1149
Query: 430 AEGDESG-TEDEQVAFAKEVENFYRE--RNLE 458
+E+G Q+ K+ E +++ R+LE
Sbjct: 1150 ERLEEAGGATAAQIEMNKKREAEFQKLRRDLE 1181
>ZFIN|ZDB-GENE-000322-5 [details] [associations]
symbol:myhz1.1 "myosin, heavy polypeptide 1.1,
skeletal muscle" species:7955 "Danio rerio" [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-000322-5 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GO:GO:0001757 InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099788 EMBL:BX510649 IPI:IPI00932699
Ensembl:ENSDART00000109263 Uniprot:F1Q4R7
Length = 1938
Score = 139 (54.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 73/332 (21%), Positives = 144/332 (43%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVN 205
+ + V +E L K EA+ E EEK+ + N+L ++ ++ C +
Sbjct: 856 KEDFVKCKEDLAKAEAKKKELEEKM---VALLQEKNDLQLAVASESENLSDAEERCEGLI 912
Query: 206 ESSSEIKAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEV 259
+S +++A+ + E+L+ A A +KL S+ ++ LE A +
Sbjct: 913 KSKIQLEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKH 972
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK 319
+N K E + D S KL K E+H TL+ L+ E + K++ K E+
Sbjct: 973 ATENKVKNLTEEMAAQDESIGKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKSKTKLEQ 1032
Query: 320 SDDHI--SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADE 370
D + S EK+ ++D +++ + D +ND ++ +L+ +
Sbjct: 1033 QVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLEND--KQQSEEKLKKKDFET 1090
Query: 371 RSLETKDEDDKR-GDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
L +K ED++ G +L + +++ +E +E + E +V K+ ++LS E
Sbjct: 1091 SQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEIS 1150
Query: 430 AEGDESG-TEDEQVAFAKEVENFYRE--RNLE 458
+E+G Q+ K+ E +++ R+LE
Sbjct: 1151 ERLEEAGGATAAQIEMNKKREAEFQKLRRDLE 1182
>TAIR|locus:2098443 [details] [associations]
symbol:AT3G28770 "AT3G28770" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR HSSP:P01096 eggNOG:NOG12793
EMBL:AP002057 InterPro:IPR009605 Pfam:PF06746 IPI:IPI00529324
RefSeq:NP_189519.1 UniGene:At.42736 ProteinModelPortal:Q9LH98
PaxDb:Q9LH98 PRIDE:Q9LH98 EnsemblPlants:AT3G28770.1 GeneID:822509
KEGG:ath:AT3G28770 TAIR:At3g28770 OMA:SKNEILM
ProtClustDB:CLSN2912834 Genevestigator:Q9LH98 Uniprot:Q9LH98
Length = 2081
Score = 139 (54.0 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 88/439 (20%), Positives = 170/439 (38%)
Query: 46 EKNQDDMSS---DNIDLQTDNNDVMSVGLPSDNNGSVDNQTADDVKVNTNVDRLYGNHXX 102
E N+D M +N + QTD+ D SV + ++ DD V +
Sbjct: 700 ENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENK 759
Query: 103 XXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEA 162
G + + K D V ++ +++ E + +
Sbjct: 760 KTKTNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVET-KDNKKLSSTENRDEAKE 818
Query: 163 ENGE--KEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGE 220
+GE KE+K + V A E + N G + N E + + ++ + NK E
Sbjct: 819 RSGEDNKEDKEESKDYQSVEAKEKN--ENGGVDTNVGNKEDSKDLKDDRSVEVKANKE-E 875
Query: 221 KLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKREKLEDVSVDVSAS 280
+ K S + N ++ VK + DEK+E ++ + D +
Sbjct: 876 SMKKKREEVQRNDKSSTKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGNKEENKDTINT 935
Query: 281 KLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKN-DEKRE--KLDDA 337
+K G + + + ++S++K K E+K E ++ + K D K+E K +++
Sbjct: 936 S---SKQKGKDK-----KKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENS 987
Query: 338 LVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTL 397
+ E NK K + +KN+ E +E+ +TK+E K K D + + +
Sbjct: 988 KLKEE--NKDNKEKKESEDSASKNR-EKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSE 1044
Query: 398 ESEVKESKPEV-DVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQ-VAFAKEVENFYRER 455
E + K+ K E D+ + +E + E ++ E E E + KE + +++
Sbjct: 1045 ERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKK 1104
Query: 456 NLEFKHPKFYKEDLNLLKL 474
+ E K K ++ ++ KL
Sbjct: 1105 HEESKSRKKEEDKKDMEKL 1123
Score = 138 (53.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 83/455 (18%), Positives = 177/455 (38%)
Query: 25 DVNMSDGETNVDVKDPPFSIPEKNQDDMSSDNIDLQTDNNDVM---SVGLPSDNNGSVDN 81
+V +DG+ + ++ N + + ++N++ + D ++ SVG ++N S++
Sbjct: 573 EVTTNDGDHTKEKRE---ETQGNNGESVKNENLENKEDKKELKDDESVGAKTNNETSLEE 629
Query: 82 -----QTADDVKVNTN-VDRLYGNHXXXXXXXXXXXXXXXX----XXTGTNAPVDVIAKE 131
Q D +N+ VD GN T + V+V +
Sbjct: 630 KREQTQKGHDNSINSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESKEDTKSEVEVKKND 689
Query: 132 NSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEK-EEKLDDDSVVGVSANELSGTRND 190
SS K + + + E E + ++ ++++ + ++K ++ + G + +
Sbjct: 690 GSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAK 749
Query: 191 GSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECA 250
G + NE+ K E N G K + V K+ +K+ + + + +
Sbjct: 750 GKKKESKENKKTKTNENRVRNK-EENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLS 808
Query: 251 TADERPSEVKAQNDEKREKLEDVSVDV-SASKLYGTKNDGIESHVLTLNQLEFA--ERSS 307
+ + R E K ++ E ++ ++ S D S +N G++++V + +RS
Sbjct: 809 STENR-DEAKERSGEDNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSV 867
Query: 308 DIKAKNEEKGEKSDDHISKNDEK--REKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLES 365
++KA EE +K + + +ND+ +E D A ++ V K + + + E
Sbjct: 868 EVKANKEESMKKKREEVQRNDKSSTKEVRDFANNMDIDVQK---GSGESVKYKKDEKKEG 924
Query: 366 AAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLF 425
+ + K DK ++ + +E K E V E+ K+ N
Sbjct: 925 NKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKK-EEDKKEY-VNNELKKQEDNKK--- 979
Query: 426 EPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFK 460
E +E + E++ KE E+ +N E K
Sbjct: 980 ETTKSENSKLKEENKDNKEKKESEDS-ASKNREKK 1013
>UNIPROTKB|E2R9X2 [details] [associations]
symbol:ARID5B "AT-rich interactive domain-containing
protein 5B" species:9615 "Canis lupus familiaris" [GO:0045444 "fat
cell differentiation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0030325 "adrenal gland
development" evidence=IEA] [GO:0010761 "fibroblast migration"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008585 "female gonad development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0001822
"kidney development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060612 "adipose tissue
development" evidence=ISS] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0060325 "face
morphogenesis" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048008 "platelet-derived growth factor receptor signaling
pathway" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0005634 GO:GO:0051091
GO:GO:0030325 GO:GO:0008585 GO:GO:0048644 GO:GO:0060612
GO:GO:0006351 GO:GO:0008584 GO:GO:0044212 GO:GO:0048008
GO:GO:0003713 GO:GO:0009791 GO:GO:0001822 GO:GO:0035264
GO:GO:0045444 GO:GO:0060021 GO:GO:0060325 GO:GO:0048705
Gene3D:1.10.150.60 SUPFAM:SSF46774 ProteinModelPortal:E2R9X2
GO:GO:0048468 GO:GO:0060613 GO:GO:0010761 Uniprot:E2R9X2
Length = 1187
Score = 136 (52.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/157 (27%), Positives = 76/157 (48%)
Query: 381 KRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDE 440
K + +DG A ++ E+ SKP+ + + K+ SN +P VA G+E DE
Sbjct: 269 KDSNNNSDGKAVAKVKCEARSALSKPKNN--HNNCKKVSNEE---KPKVAIGEECRA-DE 322
Query: 441 QVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGES 499
Q AF + + +ER + P + +NL +++A KLGGY+ +T+ + W+ + +
Sbjct: 323 Q-AFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 381
Query: 500 FNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
T+ + R YE+ +L YE+ + PL
Sbjct: 382 LGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPL 418
>SGD|S000001800 [details] [associations]
symbol:SRP40 "Nucleolar serine-rich protein" species:4932
"Saccharomyces cerevisiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] SGD:S000001800
Pfam:PF05022 GO:GO:0005730 GO:GO:0006913 EMBL:BK006944 EMBL:X73541
GeneTree:ENSGT00700000104548 eggNOG:NOG318801 InterPro:IPR007718
RefSeq:NP_013018.3 GeneID:853967 KEGG:sce:YKR092C KO:K02927
RefSeq:NP_013020.3 GeneID:853969 KEGG:sce:YKR094C EMBL:L11275
EMBL:Z28317 PIR:S38170 ProteinModelPortal:P32583 DIP:DIP-2115N
IntAct:P32583 MINT:MINT-472548 STRING:P32583 PaxDb:P32583
EnsemblFungi:YKR092C CYGD:YKR092c OMA:DAXESAR OrthoDB:EOG4M68TB
NextBio:975404 Genevestigator:P32583 GermOnline:YKR092C
Uniprot:P32583
Length = 406
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 58/294 (19%), Positives = 122/294 (41%)
Query: 155 ERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNESSSEIKAE 214
+ + K+ + E EEK S S++ S + + S + ++ + SSS +
Sbjct: 9 DEVPKLSVKEKEIEEKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSS 68
Query: 215 NNKMGEKLDGAAVFYASAKKLSGSKTN--------GSLNQLECATADERPSEVKAQNDEK 266
++ E ++ +S+ S S+++ GS + +++DE SE +++++ K
Sbjct: 69 DSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSS-SSSSSDESSSESESEDETK 127
Query: 267 REKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISK 326
+ E + D +K T+ + S + + + SS+ ++ +E + S S
Sbjct: 128 KRARESDNEDAKETKKAKTEPESSSS---SESSSSGSSSSSESESGSESDSDSSSSSSSS 184
Query: 327 NDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDED-DKRGDK 385
+D + + D+ S + S +D + + +S+++ S D D D D
Sbjct: 185 SDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDS 244
Query: 386 LNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTED 439
+ G +D + +S ES + +S + S L E A DES E+
Sbjct: 245 DSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSEL-ETKEATADESKAEE 297
>UNIPROTKB|J9NV13 [details] [associations]
symbol:ARID5B "AT-rich interactive domain-containing
protein 5B" species:9615 "Canis lupus familiaris" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 GeneTree:ENSGT00510000046413 CTD:84159 OMA:ILPYERF
EMBL:AAEX03002750 EMBL:AAEX03002749 RefSeq:XP_849593.1
Ensembl:ENSCAFT00000048488 GeneID:479217 KEGG:cfa:479217
Uniprot:J9NV13
Length = 1201
Score = 136 (52.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 43/157 (27%), Positives = 76/157 (48%)
Query: 381 KRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDE 440
K + +DG A ++ E+ SKP+ + + K+ SN +P VA G+E DE
Sbjct: 269 KDSNNNSDGKAVAKVKCEARSALSKPKNN--HNNCKKVSNEE---KPKVAIGEECRA-DE 322
Query: 441 QVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGES 499
Q AF + + +ER + P + +NL +++A KLGGY+ +T+ + W+ + +
Sbjct: 323 Q-AFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 381
Query: 500 FNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
T+ + R YE+ +L YE+ + PL
Sbjct: 382 LGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPL 418
>CGD|CAL0002613 [details] [associations]
symbol:orf19.808 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:1900471
"negative regulation of inositol biosynthetic process by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:1900472 "positive regulation of
phosphatidylcholine biosynthetic process by positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:1900473 "negative regulation of phosphatidylcholine
biosynthetic process by negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0031939 "negative regulation of chromatin silencing at
telomere" evidence=IEA] [GO:1900526 "negative regulation of
phosphatidylserine biosynthetic process by negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:1900375
"positive regulation of inositol biosynthetic process by positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:1900525 "positive regulation of
phosphatidylserine biosynthetic process by positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
CGD:CAL0002613 Pfam:PF08598 InterPro:IPR013907 EMBL:AACQ01000019
RefSeq:XP_720932.1 GeneID:3637334 KEGG:cal:CaO19.808
eggNOG:NOG310592 Uniprot:Q5AHI8
Length = 610
Score = 137 (53.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 104/404 (25%), Positives = 178/404 (44%)
Query: 28 MSDGETNVD----VKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQT 83
MS +T V+ V++P F+ P K +D +S+ + DL + N V + L ++ + + T
Sbjct: 1 MSQAQTEVNNIESVENPSFTTPLK-RDSISNGDGDLDSTTNQVANTTLGRES--PLSDIT 57
Query: 84 ADDVKVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKS-DGSLV 142
A V + ++ G P+D + N++TKS +GS
Sbjct: 58 ASPVSFDLSLREADGE--------IQSTIDNIEKFLEEREPIDE-NRNNTNTKSKEGS-- 106
Query: 143 HPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSG--TRNDGSHVHPMNPE 200
+ A +E L +IE E KE LD D V +N +G +N S+ + E
Sbjct: 107 ----EEADDAVQEVLKEIETEFA-KE--LDHDDKVPKDSNITTGDDVKNRDSYE---SSE 156
Query: 201 CAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNG--SLNQLECATADERPSE 258
+ ++E+ SE AE +KM + LD + S ++NG L L T R +
Sbjct: 157 LSDLDENQSE--AETDKM-DFLDEIGT--VQDEDGSNGQSNGLSDLQNLSQLTELARLKD 211
Query: 259 VKAQ--NDEKREKLEDVSVDVSASKLY--GTKNDGI----ESHVLTLNQLEFAERSSDIK 310
V + +DE ++L + ++ + +KL G + + H T +L+ A SD+K
Sbjct: 212 VDSDFGDDEDEDELNNSNLHSNGNKLAINGESHKRTLEIDDEHEQTTKKLKAATPVSDLK 271
Query: 311 AKNEEKGEKSDD--HISKNDEKREKLD-DALVFEVSVNKLCDSKNDGIHMHAKNQLESAA 367
K +E+ +K I +ND+K+ KLD D E+ V K D + A++ A
Sbjct: 272 DKAQEEEQKDTPTVEIVENDKKKNKLDNDQQKIELIVLK------DDQEISAEDN--GAE 323
Query: 368 ADERSLETKDEDDKRGDKLNDGVADMELTLESE-VKESKPEVDV 410
A+ E + ED+ G+ N + E SE V+++K + V
Sbjct: 324 AEP---EDEGEDNDNGN--NTDAPNAEEVANSEAVQKNKEDAVV 362
Score = 42 (19.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 624 QVANVKATNPQLDTMVIDIGPPADWVKINVQRTIDCFEVYAL 665
+VAN +A + V+ D V +N QR + E+ A+
Sbjct: 346 EVANSEAVQKNKEDAVVIENEERDDVDLNKQRNLAIQELIAI 387
>UNIPROTKB|Q5AHI8 [details] [associations]
symbol:DEP1 "Putative uncharacterized protein DEP1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0002613 Pfam:PF08598
InterPro:IPR013907 EMBL:AACQ01000019 RefSeq:XP_720932.1
GeneID:3637334 KEGG:cal:CaO19.808 eggNOG:NOG310592 Uniprot:Q5AHI8
Length = 610
Score = 137 (53.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 104/404 (25%), Positives = 178/404 (44%)
Query: 28 MSDGETNVD----VKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQT 83
MS +T V+ V++P F+ P K +D +S+ + DL + N V + L ++ + + T
Sbjct: 1 MSQAQTEVNNIESVENPSFTTPLK-RDSISNGDGDLDSTTNQVANTTLGRES--PLSDIT 57
Query: 84 ADDVKVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKS-DGSLV 142
A V + ++ G P+D + N++TKS +GS
Sbjct: 58 ASPVSFDLSLREADGE--------IQSTIDNIEKFLEEREPIDE-NRNNTNTKSKEGS-- 106
Query: 143 HPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSG--TRNDGSHVHPMNPE 200
+ A +E L +IE E KE LD D V +N +G +N S+ + E
Sbjct: 107 ----EEADDAVQEVLKEIETEFA-KE--LDHDDKVPKDSNITTGDDVKNRDSYE---SSE 156
Query: 201 CAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNG--SLNQLECATADERPSE 258
+ ++E+ SE AE +KM + LD + S ++NG L L T R +
Sbjct: 157 LSDLDENQSE--AETDKM-DFLDEIGT--VQDEDGSNGQSNGLSDLQNLSQLTELARLKD 211
Query: 259 VKAQ--NDEKREKLEDVSVDVSASKLY--GTKNDGI----ESHVLTLNQLEFAERSSDIK 310
V + +DE ++L + ++ + +KL G + + H T +L+ A SD+K
Sbjct: 212 VDSDFGDDEDEDELNNSNLHSNGNKLAINGESHKRTLEIDDEHEQTTKKLKAATPVSDLK 271
Query: 311 AKNEEKGEKSDD--HISKNDEKREKLD-DALVFEVSVNKLCDSKNDGIHMHAKNQLESAA 367
K +E+ +K I +ND+K+ KLD D E+ V K D + A++ A
Sbjct: 272 DKAQEEEQKDTPTVEIVENDKKKNKLDNDQQKIELIVLK------DDQEISAEDN--GAE 323
Query: 368 ADERSLETKDEDDKRGDKLNDGVADMELTLESE-VKESKPEVDV 410
A+ E + ED+ G+ N + E SE V+++K + V
Sbjct: 324 AEP---EDEGEDNDNGN--NTDAPNAEEVANSEAVQKNKEDAVV 362
Score = 42 (19.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 624 QVANVKATNPQLDTMVIDIGPPADWVKINVQRTIDCFEVYAL 665
+VAN +A + V+ D V +N QR + E+ A+
Sbjct: 346 EVANSEAVQKNKEDAVVIENEERDDVDLNKQRNLAIQELIAI 387
>DICTYBASE|DDB_G0281419 [details] [associations]
symbol:ncapGa "putative non-SMC condensin I complex,
subunit Ga" species:44689 "Dictyostelium discoideum" [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
InterPro:IPR027165 dictyBase:DDB_G0281419 SUPFAM:SSF48371
EMBL:AAFI02000041 eggNOG:COG5218 KO:K06678 PANTHER:PTHR14418
RefSeq:XP_640663.1 EnsemblProtists:DDB0305110 GeneID:8623047
KEGG:ddi:DDB_G0281419 InParanoid:Q54TZ8 OMA:YLDFSDE Uniprot:Q54TZ8
Length = 1536
Score = 136 (52.9 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 64/310 (20%), Positives = 140/310 (45%)
Query: 151 VAAEERLTKIEAENGEKEEKLD-DDSVVGVSANELSGTRNDGSHVHPMNPECAAVNESSS 209
++ EE K + +N +K + ++ DD ++ +E + + + N N+ S
Sbjct: 1229 ISEEEVEIKKKKKNKKKRKSIENDDEIINEEISESNYKKKNKDKKKKKNKNKRKSNDESE 1288
Query: 210 --EIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKA-QNDEK 266
EI+++ + E + + KK K N + N+ + ++DE E+++ Q +++
Sbjct: 1289 DQEIQSDQEVVYEVISEEEI---KKKK---KKKNKNKNKNKRKSSDESDQEIQSDQKEQE 1342
Query: 267 REKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISK 326
E E++S + K KN + + E SD K + +E+ E ++ IS+
Sbjct: 1343 EEYYEEISEE-EIKKKKKKKNKNKNKNKKKSSDESDQEIQSDQKEQEQEEHEDYEE-ISE 1400
Query: 327 NDEKREKLDDALVFEVSVNKLCDSKNDG-IHMHAKNQLESAAADERSLETKDEDDKRGDK 385
+ K++K + S K +D I +++E ++ ++ +++ + K
Sbjct: 1401 EEIKKKKKNKNKNKRKSSKKEKSQHDDNEILSEEISEIEDKKKNKNKRKSIEKEKPKKKK 1460
Query: 386 LNDGVADMELTLESEVKESKPEVD-VGYEVSKESSNLSFLFEP--PVAEGDESGTEDEQV 442
+DG + E E E ++ + E+D V ++ S E +L+ ++ G E E+EQ
Sbjct: 1461 KSDG--EQE---EEEAEQEEEEIDNVSFDSSIEKPDLNTSMRDYLNISSGTEPELEEEQS 1515
Query: 443 AFAKEVENFY 452
+++V NF+
Sbjct: 1516 DGSEDVSNFF 1525
>TAIR|locus:504955937 [details] [associations]
symbol:AT2G22795 "AT2G22795" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] GO:GO:0005794 EMBL:CP002685
GO:GO:0005768 GO:GO:0005802 IPI:IPI00534353 RefSeq:NP_850032.1
UniGene:At.45724 UniGene:At.74141 PRIDE:F4IKG5
EnsemblPlants:AT2G22795.1 GeneID:816810 KEGG:ath:AT2G22795
OMA:ESTCRKT Uniprot:F4IKG5
Length = 734
Score = 132 (51.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 75/383 (19%), Positives = 151/383 (39%)
Query: 75 NNGSVDNQTADDVKVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVI--AKEN 132
+NGS + ++ K N +D + G +A +V+ ++E
Sbjct: 259 DNGSSEESEVEEKKENRGIDESEESKEKDIDEKANIEEARENNYKGDDASSEVVHESEEK 318
Query: 133 SSTKSDGSLVHPLNQHEHVAAEERLTKI----EAENGEKE-EKLDDDSVVGVSANELSGT 187
+S + V + + E+ + K +NGE ++ S G ++ L G
Sbjct: 319 TSESENSEKVEDKSGIKTEEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGI 378
Query: 188 RNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQL 247
+++G + N+S+ E G DG + +++ S ++ G ++
Sbjct: 379 KSEGESMEKNELLEKEFNDSNGESSVTGKSTGSG-DGGS--QETSEVSSQEESKGKESET 435
Query: 248 ECATADERPSEVKAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAER-- 305
+ E K + E +EK E S + + K K + +ES N+ + E+
Sbjct: 436 KDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAK-EKVESSSQEKNEDKETEKIE 494
Query: 306 SSDIKAKNEEKGEKSDDHISKNDEK-REKLDDALVFEVSVNK--LCDSKNDGIHMHAKNQ 362
SS ++ E++ E + S + EK EK + E S ++ D +N+ I +
Sbjct: 495 SSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASS 554
Query: 363 LESAAADERSLETKDED---DKRGDKLNDGVADMELTLESEVKESKPE-VDVGYEVSKES 418
E + +E + K+E ++ +K N+ + E + E KE + E ++ S+E
Sbjct: 555 QEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEE 614
Query: 419 SNLSFLFEPPVAEGDESGTEDEQ 441
+ E E +ES + + Q
Sbjct: 615 TKEK---ETETKEKEESSSNESQ 634
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 77/331 (23%), Positives = 139/331 (41%)
Query: 155 ERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNP-----ECAAVNESSS 209
E K E E EE+ D+ G NE SGT N E + ES
Sbjct: 153 EENEKSGTEESEVEERKDNG---GTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEV 209
Query: 210 EIKAENNKMGE-KLDGAAVFYASAKKLSG-SKTNGSLNQLECATADERPSEVKAQNDEKR 267
E + EN E + G+ KK +G ++ + + E + +E+ ++ E
Sbjct: 210 EERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVE 269
Query: 268 EKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKN 327
EK E+ +D S ++ N + + SS++ ++EEK +S++
Sbjct: 270 EKKENRGIDESEESKEKDIDEKANIEEARENNYKGDDASSEVVHESEEKTSESENSEKVE 329
Query: 328 DE---KREKLDDALVFEVSVNKL------CDSKNDGIHM-HAKNQLESAAADERSLETKD 377
D+ K E+++D+++ V N D K+ G H + LE ++ S+E +
Sbjct: 330 DKSGIKTEEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNE 389
Query: 378 EDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGT 437
+K + ND + +T +S D G S+E+S +S E ++G ES T
Sbjct: 390 LLEK---EFNDSNGESSVT-----GKSTGSGDGG---SQETSEVSSQEE---SKGKESET 435
Query: 438 EDEQVAFAKEVENFYRERNLEFKHPKFYKED 468
+D++ + ++E E+ RE + K +E+
Sbjct: 436 KDKEESSSQE-ESKDRETETKEKEESSSQEE 465
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 74/323 (22%), Positives = 132/323 (40%)
Query: 152 AAEERLTKIEAENGEKE--EKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNESSS 209
A+ E + + E + E E EK++D S G+ E+ + S + + P ESSS
Sbjct: 307 ASSEVVHESEEKTSESENSEKVEDKS--GIKTEEV-----EDSVIKSVLPNTTDNGESSS 359
Query: 210 EIKAENNKMGEKLDGAAVFYASAKKLSGSKTNG-SLNQLECATADERPSEVKAQNDEKRE 268
+ K+ + G + D L G K+ G S+ + E + S ++ K
Sbjct: 360 DEKSTGSSSGHESDS----------LEGIKSEGESMEKNELLEKEFNDSNGESSVTGKST 409
Query: 269 KLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKS--DDHISK 326
D ++ ++ G ES + E S D + + +EK E S ++ + K
Sbjct: 410 GSGDGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDK 469
Query: 327 NDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQL-ESAAADERSLETKDEDDKRGDK 385
E +EK++ + E + +K + K + E+ +E S + K E+ + K
Sbjct: 470 ETEAKEKVESSSQ-EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETK 528
Query: 386 LNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFA 445
N+ + E T + E ++ + E E SKE N + E + E E E
Sbjct: 529 DNEESSSQEETKDKENEKIEKEEASSQEESKE--NETETKEKEESSSQEETKEKENEKIE 586
Query: 446 KEVENFYRERNLEFKHPKFYKED 468
KE E+ +E E ++ K KE+
Sbjct: 587 KE-ESAPQEETKEKENEKIEKEE 608
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00048
Identities = 52/240 (21%), Positives = 106/240 (44%)
Query: 206 ESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDE 265
E+ ++ K E++ E +D A K S S+ + E + E K + DE
Sbjct: 451 ETETKEKEESSSQEETMDKETE--AKEKVESSSQEKNEDKETEKIESSFL-EETKEKEDE 507
Query: 266 KREKLEDVSVDVSASKLYGTK-NDGIESHVLTLNQ----LEFAERSSDIKAKNEEKGEKS 320
+EK E S + + K TK N+ S T ++ +E E SS ++K E K
Sbjct: 508 TKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKE 567
Query: 321 DDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDD 380
+ S +E +EK ++ + E S + + + + + E+ ETK++++
Sbjct: 568 KEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEE 627
Query: 381 KRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDE 440
++ + V + E + +V+E++ + D E + ESS + + + + +E+ ++E
Sbjct: 628 SSSNESQENV-NTESEKKEQVEENEKKTD---EDTSESSKENSVSDTEQKQSEETSEKEE 683
>TAIR|locus:2027513 [details] [associations]
symbol:AT1G56660 "AT1G56660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 EMBL:AC009323
IPI:IPI00548934 PIR:C96608 RefSeq:NP_176058.1 UniGene:At.48313
PRIDE:Q9FXB5 EnsemblPlants:AT1G56660.1 GeneID:842121
KEGG:ath:AT1G56660 TAIR:At1g56660 OMA:KKHEDVS
ProtClustDB:CLSN2912802 Genevestigator:Q9FXB5 Uniprot:Q9FXB5
Length = 522
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 81/360 (22%), Positives = 141/360 (39%)
Query: 120 GTNAPVDVIAKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGV 179
G N +V ++ K DG +V ++ H E + + ++ E EKE K +
Sbjct: 66 GKNVDSEVKEDKDDDKKKDGKMVSKKHEEGHGDLEVKESDVKVEEHEKEHKKGKEK---- 121
Query: 180 SANELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSK 239
EL + + + + E + KA+ K E + ++ G K
Sbjct: 122 KHEELEEEKEGKKKKNKKEKDESGPEEKNK--KADKEKKHEDVSQEK---EELEEEDGKK 176
Query: 240 TNGSLNQLECATADERPSEVKAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQ 299
N + E T +E+ + K + +K E + V K G K D +E +
Sbjct: 177 -NKKKEKDESGT-EEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGD-LEKEDEEKKK 233
Query: 300 LEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALV-----FEVSVNKLCDSKNDG 354
E E ++K K+ +K +K + S +EK++K D E KL K G
Sbjct: 234 -EHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKG 292
Query: 355 IHMHAKNQLESAA---ADERSLETKDEDDKRGDKL-NDGVADMELTLESEV--KESKPEV 408
+++ + A E+ ++ + D K G K N A + T+ EV KE+K +
Sbjct: 293 EKPEKEDEGKKTKEHDATEQEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETKDKD 352
Query: 409 DVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKED 468
D E +K+ N E +G++ ED++ E E R+ LE + +ED
Sbjct: 353 DDEGE-TKQKKNKKK--EKKSEKGEKDVKEDKKKENPLETEVMSRDIKLEEPEAEKKEED 409
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 78/331 (23%), Positives = 132/331 (39%)
Query: 126 DVIAKENSSTKSDGS-LVHPLNQHEHVAAEERLTKIEAENG--EKEEKLDDDSV-VGVSA 181
DV +E+ G H + E +++ K + E+G EK +K D + VS
Sbjct: 105 DVKVEEHEKEHKKGKEKKHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQ 164
Query: 182 NELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTN 241
+ DG + + E + K E + E KK+ G K
Sbjct: 165 EKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSN------EDKKVKGKKEK 218
Query: 242 GSLNQLECATA------DERPSEVKAQNDEKREKLE-DVS-VDVSASKLYGTKNDGIESH 293
G LE DE E+K ++ +K +K E D S + K K + ES
Sbjct: 219 GEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDEST 278
Query: 294 VLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKND 353
+L+ ++ K + E++G+K+ +H D +++DD E + +K + K
Sbjct: 279 EKEDKKLK-GKKGKGEKPEKEDEGKKTKEH----DATEQEMDD----EAADHK--EGKKK 327
Query: 354 GIHMHAKNQLESAAADERSLETKDEDDKRGD---KLNDGVADMELTLESEVKESKPEVDV 410
AK + E+ + ETKD+DD G+ K N E +VKE K + +
Sbjct: 328 KNKDKAKKK-ETVIDEVCEKETKDKDDDEGETKQKKNKKKEKKSEKGEKDVKEDKKKENP 386
Query: 411 GYEVSKESSNLSFLFEPPVAEGDESGTEDEQ 441
E S ++ L EP + +E TE+++
Sbjct: 387 -LETEVMSRDIK-LEEPEAEKKEEDDTEEKK 415
>UNIPROTKB|P12957 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0006936 "muscle contraction" evidence=IEA] [GO:0017022 "myosin
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030016 "myofibril" evidence=IEA]
InterPro:IPR006017 PRINTS:PR01076 GO:GO:0005856 GO:GO:0030016
GO:GO:0006936 InterPro:IPR006018 Pfam:PF02029 EMBL:J04968
EMBL:D17648 EMBL:M28417 EMBL:M60620 EMBL:M59762 EMBL:D17552
EMBL:M26684 IPI:IPI00572834 IPI:IPI00577689 IPI:IPI00583069
PIR:A33430 PIR:A39038 RefSeq:NP_989489.1 UniGene:Gga.4988
DisProt:DP00120 ProteinModelPortal:P12957 STRING:P12957
GeneID:373965 KEGG:gga:373965 CTD:800 eggNOG:NOG127381
HOGENOM:HOG000013012 HOVERGEN:HBG050785 InParanoid:P12957 KO:K12327
NextBio:20813495 Uniprot:P12957
Length = 771
Score = 132 (51.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 79/350 (22%), Positives = 134/350 (38%)
Query: 130 KENSSTKSDGSLVHPLNQHEHVAAEE--RLTKIEA---EN-GEKEEKLDDDSVVGVSAN- 182
KE + + +N VA EE R T EA E +EE+ +
Sbjct: 53 KEEGDVSGEVTEKSEVNAQNSVAEEETKRSTDDEAALLERLARREERRQKRLQEALERQK 112
Query: 183 ELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNG 242
E T DGS P E V E+ EI + K+ + + S + N
Sbjct: 113 EFDPTITDGSLSVPSRREVNNVEEN--EITGKEEKVETRQGRCEIEETETVTKSYQRNNW 170
Query: 243 SLNQLECATADERPSEVKAQNDEKREKLE-DVSVDVSASK--LYGTKNDGIESHVLTLNQ 299
+ E +E+ SE + + E+ + DV+V+ S K + TK + + T
Sbjct: 171 RQDGEEEGKKEEKDSEEEKPKEVPTEENQVDVAVEKSTDKEEVVETKTLAVNAENDTNAM 230
Query: 300 LEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMH- 358
LE + +D K +E+ EK + + +++R K ++ K + K
Sbjct: 231 LEGEQSITDAADKEKEEAEKEREKLEAEEKERLKAEEEKKAAEEKQKAEEEKKAAEERER 290
Query: 359 AKNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKES 418
AK + E AA+ER +E+ K ++ A+ E E +++ E E +K
Sbjct: 291 AKAEEEKRAAEERERAKAEEERKAAEERERAKAEEERKAAEERAKAEEERKAAEERAKAE 350
Query: 419 SNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRER-NLEFKHPKFYKE 467
E AE + E+ + A A+E + E+ LE + K K+
Sbjct: 351 EERKAAEERAKAEKERKAAEERERAKAEEEKRAAEEKARLEAEKLKEKKK 400
>UNIPROTKB|E2RFI5 [details] [associations]
symbol:ARID3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
CTD:10620 OMA:LFSMARQ EMBL:AAEX03016311 RefSeq:XP_544771.2
ProteinModelPortal:E2RFI5 Ensembl:ENSCAFT00000028463 GeneID:487646
KEGG:cfa:487646 Uniprot:E2RFI5
Length = 560
Score = 129 (50.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 67/262 (25%), Positives = 116/262 (44%)
Query: 304 ERSSDIKAKNEEKG----EKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHA 359
ERS+ EE+G E DD +++ EK E + F V K+ ++ D
Sbjct: 84 ERSNVNSEPEEEEGGLEDEDGDDEVAEVAEK-EAQATSKYFHVQ--KV--ARQDPRAAPG 138
Query: 360 KNQLESAAADERSLETKDEDDKRGDKLNDGVADMEL---TLESEVKES-----KPEVDVG 411
L R+ + K++ K K V+ E L+ ++K++ + D G
Sbjct: 139 SGLLPGPGLPLRAQQAKEDHTKDASKAPPSVSTAEQPSWNLDEQLKQNGGLTWSDDADGG 198
Query: 412 Y--EVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKED 468
E+S++ + L +E +GD E+ F ++ F ++R P K+
Sbjct: 199 RGREISRDFAKL---YE---LDGDP-----ERKEFLDDLFIFMQKRGTPINRIPIMAKQI 247
Query: 469 LNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE--K 526
L+L L++ V + GG E+ + K+WR++ + N P + T+ ++T R Y K L YE K
Sbjct: 248 LDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEK 307
Query: 527 HRMSN-GELPLH-DGSLTEPSR 546
+S+ EL DG+ E R
Sbjct: 308 KALSSPAELQAAIDGNRREGRR 329
>UNIPROTKB|P82970 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527
GO:GO:0045893 GO:GO:0005654 GO:GO:0005730 GO:GO:0000785
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:CH471104 GO:GO:0031492 OrthoDB:EOG4CZBHP EMBL:AF250329
EMBL:AF250330 EMBL:AK094058 EMBL:AL391294 EMBL:BC005342
IPI:IPI00006157 RefSeq:NP_110390.1 UniGene:Hs.282204
ProteinModelPortal:P82970 IntAct:P82970 STRING:P82970
PhosphoSite:P82970 DMDM:23396771 PaxDb:P82970 PRIDE:P82970
DNASU:79366 Ensembl:ENST00000358130 GeneID:79366 KEGG:hsa:79366
UCSC:uc004eee.1 CTD:79366 GeneCards:GC0XM080370 HGNC:HGNC:8013
HPA:HPA000511 MIM:300385 neXtProt:NX_P82970 PharmGKB:PA31789
eggNOG:NOG134182 HOGENOM:HOG000113856 HOVERGEN:HBG094823
InParanoid:P82970 OMA:KDDGGKD ChiTaRS:HMGN5 GenomeRNAi:79366
NextBio:68337 ArrayExpress:P82970 Bgee:P82970 CleanEx:HS_NSBP1
Genevestigator:P82970 GermOnline:ENSG00000198157 Uniprot:P82970
Length = 282
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 71/260 (27%), Positives = 117/260 (45%)
Query: 196 PMNPECAAVNESSS-EIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLEC-ATAD 253
P+ PE SSS ++K +++ M E +D +A A K+ + + + + N A
Sbjct: 29 PVTPEVKPKRTSSSRKMKTKSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKIT 88
Query: 254 ERPSEVKAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKN 313
E P+ K + K E +ED A++ G K + + + V N+ E ++ D + +N
Sbjct: 89 EAPASEKEIVEVKEENIED------ATEKGGEKKEAVAAEVK--NEEE--DQKEDEEDQN 138
Query: 314 EEKGE--KSD-DHISKNDEKR-----EKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLES 365
EEKGE K D D + D K EK +DA E K D K +G K + E
Sbjct: 139 EEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDG-KKGEDGKGNGEDGKEKGEDEK 197
Query: 366 AAADERSL-ETKDEDD--KRGDKLNDGVADMELTLESEVKESKPEVDVGYE--VSKESSN 420
D + + K+ +D ++GDK +G D+++ + + +E E + G E KE +
Sbjct: 198 EEEDRKETGDGKENEDGKEKGDK-KEG-KDVKVKEDEKEREDGKEDEGGNEEEAGKEKED 255
Query: 421 LSFLFEPPVAEGDESGTEDE 440
L E +E EDE
Sbjct: 256 LK--------EEEEGKEEDE 267
>UNIPROTKB|G3X7C0 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042770 "signal transduction in response to DNA
damage" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0009314 "response to radiation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000075
"cell cycle checkpoint" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000776 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:DAAA02073280
EMBL:DAAA02073281 Ensembl:ENSBTAT00000023619 Uniprot:G3X7C0
Length = 1232
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 59/285 (20%), Positives = 125/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ ++L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + +A K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>UNIPROTKB|O97593 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0042770 "signal transduction in
response to DNA damage" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0036033 "mediator
complex binding" evidence=IEA] [GO:0032876 "negative regulation of
DNA endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 GO:GO:0005737 GO:GO:0000776 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030893 EMBL:AF072712 IPI:IPI00687474 PIR:S71602
RefSeq:NP_777039.1 UniGene:Bt.109789 ProteinModelPortal:O97593
STRING:O97593 PRIDE:O97593 GeneID:282370 KEGG:bta:282370 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 InParanoid:O97593 KO:K06636
OrthoDB:EOG4HX507 NextBio:20806162 Uniprot:O97593
Length = 1233
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 59/285 (20%), Positives = 125/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ ++L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + +A K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>UNIPROTKB|E2QV07 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 CTD:8243 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 EMBL:AAEX03026385 RefSeq:XP_538049.3
Ensembl:ENSCAFT00000025795 GeneID:480928 KEGG:cfa:480928
Uniprot:E2QV07
Length = 1233
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 59/285 (20%), Positives = 125/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ ++L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + +A K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>UNIPROTKB|Q14683 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042770
"signal transduction in response to DNA damage" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=IDA] [GO:0009314 "response to radiation"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008280 "cohesin core heterodimer" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=TAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=TAS] [GO:0000776 "kinetochore" evidence=IDA] [GO:0007126
"meiosis" evidence=ISS] [GO:0000070 "mitotic sister chromatid
segregation" evidence=TAS] [GO:0030893 "meiotic cohesin complex"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0000776 GO:GO:0051301 GO:GO:0007052 GO:GO:0006281
Reactome:REACT_1675 GO:GO:0003682 GO:GO:0042770
Reactome:REACT_111183 GO:GO:0006310 GO:GO:0000794 GO:GO:0030261
GO:GO:0009314 GO:GO:0003777 GO:GO:0032876 GO:GO:0007091
GO:GO:0000398 GO:GO:0000075 GO:GO:0000236 GO:GO:0000777
GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553 EMBL:Z97054
Orphanet:199 EMBL:AL161779 GO:GO:0030893 GO:GO:0008280 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:S78271 EMBL:D80000 EMBL:BC112127 IPI:IPI00291939 PIR:I54383
RefSeq:NP_006297.2 UniGene:Hs.211602 ProteinModelPortal:Q14683
SMR:Q14683 DIP:DIP-30911N IntAct:Q14683 MINT:MINT-233274
STRING:Q14683 PhosphoSite:Q14683 DMDM:29336622 PaxDb:Q14683
PeptideAtlas:Q14683 PRIDE:Q14683 Ensembl:ENST00000322213
GeneID:8243 KEGG:hsa:8243 UCSC:uc004dsg.3 GeneCards:GC0XM053417
HGNC:HGNC:11111 HPA:CAB025404 HPA:HPA005499 MIM:300040 MIM:300590
neXtProt:NX_Q14683 PharmGKB:PA35961 InParanoid:Q14683 OMA:NALVCET
PhylomeDB:Q14683 ChiTaRS:SMC1A GenomeRNAi:8243 NextBio:31006
ArrayExpress:Q14683 Bgee:Q14683 CleanEx:HS_SMC1A
Genevestigator:Q14683 GermOnline:ENSG00000072501 Uniprot:Q14683
Length = 1233
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 59/285 (20%), Positives = 125/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ ++L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + +A K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>UNIPROTKB|F2Z5A8 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 EMBL:GACC01000120 RefSeq:XP_003135172.3
Ensembl:ENSSSCT00000013478 GeneID:100523938 KEGG:ssc:100523938
Uniprot:F2Z5A8
Length = 1233
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 59/285 (20%), Positives = 125/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ ++L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + +A K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>MGI|MGI:1344345 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10090 "Mus musculus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;IDA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=IDA] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1344345 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0005654 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0003682 GO:GO:0042770 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030261 GO:GO:0009314 GO:GO:0032876 GO:GO:0019827
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:AL672180 GO:GO:0036033 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AF047600 EMBL:BC131667 EMBL:AK007334 EMBL:AK013648
EMBL:AK017948 EMBL:AK088183 IPI:IPI00123870 RefSeq:NP_062684.2
UniGene:Mm.482095 PDB:2WD5 PDBsum:2WD5 ProteinModelPortal:Q9CU62
SMR:Q9CU62 DIP:DIP-57021N IntAct:Q9CU62 STRING:Q9CU62
PhosphoSite:Q9CU62 PaxDb:Q9CU62 PRIDE:Q9CU62
Ensembl:ENSMUST00000045312 GeneID:24061 KEGG:mmu:24061
GeneTree:ENSGT00580000081569 InParanoid:A2AFQ5
EvolutionaryTrace:Q9CU62 NextBio:304025 Bgee:Q9CU62
CleanEx:MM_SMC1A Genevestigator:Q9CU62
GermOnline:ENSMUSG00000041133 Uniprot:Q9CU62
Length = 1233
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 59/285 (20%), Positives = 125/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ ++L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + +A K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>UNIPROTKB|I3LMC6 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 OMA:NALVCET GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 Ensembl:ENSSSCT00000028659
Uniprot:I3LMC6
Length = 1235
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 59/285 (20%), Positives = 125/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ ++L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + +A K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>UNIPROTKB|F1NDC6 [details] [associations]
symbol:MYH13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IEA]
[GO:0030016 "myofibril" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 InterPro:IPR015650
PANTHER:PTHR13140:SF22 GeneTree:ENSGT00680000099790
EMBL:AADN02029738 IPI:IPI00600802 Ensembl:ENSGALT00000001184
OMA:MSQDSIM Uniprot:F1NDC6
Length = 1460
Score = 145 (56.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 74/342 (21%), Positives = 148/342 (43%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVN 205
+ E +E L K EA+ E EEK+ + N+L +++ ++ C +
Sbjct: 858 KEEFEKTKEELAKSEAKRKELEEKM---VTLLQEKNDLQLQVQSESENLADAEERCEGLI 914
Query: 206 ESSSEIKAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEV 259
+S +++A ++ E+++ A A +KL S+ ++ LE A +
Sbjct: 915 KSKIQLEARIKELNERMEDEEEMNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKH 974
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK 319
+N K E ++D + SKL K E+H TL+ L+ E K + K E+
Sbjct: 975 ATENKVKNLTEEMAALDENISKLTKEKKALQEAHQQTLDDLQAEEDKVSTLTKTKTKLEQ 1034
Query: 320 SDDHI--SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADE 370
D + S E+++++D ++S + + D +ND M K L+ +
Sbjct: 1035 QVDDLEGSLEQERKQRMDLERAKRKLDGDLKMSQDSIMDLENDKQQMDEK--LKKKDFEI 1092
Query: 371 RSLETKDEDDK-RGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
L++K ED++ + +L + +++ E +E + E + + K+ ++LS E
Sbjct: 1093 SQLQSKIEDEQAQSSQLQKKIKELQARTEELEEEIEAERAIRAKTEKQRADLSRELEEIS 1152
Query: 430 AEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKEDLNL 471
+E+G A A ++E ++R EF+ + E+ L
Sbjct: 1153 ERLEEAGG-----ATAAQIE-MNKKREAEFQKMRRDLEEATL 1188
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 584 EVCQPIIKEKNSSCTTKSDRQIKNIGLLKRK 614
E +++K++ T + QI N+ +K+K
Sbjct: 1191 EATAAALRKKHADSTAELGEQIDNLQRVKQK 1221
>TAIR|locus:2183750 [details] [associations]
symbol:AT5G10950 "AT5G10950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=RCA] GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL365234 EMBL:AY063955
EMBL:AY096725 IPI:IPI00525626 PIR:T50804 RefSeq:NP_196656.1
UniGene:At.27129 ProteinModelPortal:Q9LEU5 PaxDb:Q9LEU5
PRIDE:Q9LEU5 EnsemblPlants:AT5G10950.1 GeneID:830962
KEGG:ath:AT5G10950 TAIR:At5g10950 eggNOG:NOG327778
HOGENOM:HOG000152996 InParanoid:Q9LEU5 OMA:KKERWEL
ProtClustDB:CLSN2916340 ArrayExpress:Q9LEU5 Genevestigator:Q9LEU5
Uniprot:Q9LEU5
Length = 395
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 68/252 (26%), Positives = 114/252 (45%)
Query: 204 VNESSSEIKAENN-KMGEKLDGAAVFYASAKKLSGS-KTNGSLNQLECATADERPSEVKA 261
V + +S+ + E N KMG+ + G V A+A ++S ++ G+++Q E + A ++P +
Sbjct: 153 VEKKASKPETEKNGKMGD-IGGKIV--AAASRMSERFRSKGNVDQKETSKASKKPK--MS 207
Query: 262 QNDEKREKLEDVSVDVSASKLYGTKNDGIESHVL---TLNQLEFAERSSD------IKAK 312
KR+ +D D A T ++ + VL N E AE SSD +K
Sbjct: 208 SKLTKRKHTDDQDEDEEAGDDIDTSSEEAKPKVLKSCNSNADEVAENSSDEDEPKVLKTN 267
Query: 313 NE--EKGEKSDDHISKNDE---KREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAA 367
N +K E +++ + +DE K KL ++ N D K I +++S
Sbjct: 268 NSKADKDEDEEENETSDDEAEPKALKLSNSNSDNGENNSSDDEKEITISKITSKKIKSNT 327
Query: 368 ADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEP 427
ADE E D +D G+K D ++D E L S +K+S +D + K E
Sbjct: 328 ADE---ENGDNED--GEKAVDEMSDGE-PLVSFLKKSPEGIDAKRKKMKGKK------EE 375
Query: 428 PVAEGDESGTED 439
EG+E+ +D
Sbjct: 376 EEEEGEENAGKD 387
>UNIPROTKB|A6NKF2 [details] [associations]
symbol:ARID3C "AT-rich interactive domain-containing
protein 3C" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045121
"membrane raft" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0045944 GO:GO:0006351 GO:GO:0003682
GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG327790
HOGENOM:HOG000236281 HOVERGEN:HBG050574 InterPro:IPR023334
PROSITE:PS51486 OrthoDB:EOG415GF5 EMBL:AL450283 IPI:IPI00062225
RefSeq:NP_001017363.1 UniGene:Hs.534549 ProteinModelPortal:A6NKF2
SMR:A6NKF2 STRING:A6NKF2 PhosphoSite:A6NKF2 PaxDb:A6NKF2
PRIDE:A6NKF2 DNASU:138715 Ensembl:ENST00000378909 GeneID:138715
KEGG:hsa:138715 UCSC:uc011lon.2 CTD:138715 GeneCards:GC09M034621
HGNC:HGNC:21209 neXtProt:NX_A6NKF2 PharmGKB:PA134928507
InParanoid:A6NKF2 OMA:FARRQPV GenomeRNAi:138715 NextBio:83815
Bgee:A6NKF2 CleanEx:HS_ARID3C Genevestigator:A6NKF2 Uniprot:A6NKF2
Length = 412
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 50/190 (26%), Positives = 82/190 (43%)
Query: 376 KDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNL---SFLFEPPVAEG 432
++E+D D+ A E E +ES+P S + L + +E +
Sbjct: 51 EEEEDAEEDEEKREEAGAE---EEAAEESRPGAQGPSSPSSQPPGLHPHEWTYEEQFKQL 107
Query: 433 DESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCK 491
E + ++ F ++ +F ++R P K+ L+L L+R V GG EV + K
Sbjct: 108 YELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRK 167
Query: 492 LWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE---KHRMSNGELPLHDGSLTEPSRIE 548
+WR+V + P T T+ ++T R Y K L YE + S GEL S R +
Sbjct: 168 VWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQAAIDSNRREGRRQ 227
Query: 549 SQAAGSQAFG 558
+ A + FG
Sbjct: 228 AYTA-TPLFG 236
>UNIPROTKB|F1RFC2 [details] [associations]
symbol:ARID5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060613 "fat pad development" evidence=IEA] [GO:0060325
"face morphogenesis" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0048705 "skeletal system morphogenesis" evidence=IEA]
[GO:0048644 "muscle organ morphogenesis" evidence=IEA] [GO:0048468
"cell development" evidence=IEA] [GO:0048008 "platelet-derived
growth factor receptor signaling pathway" evidence=IEA] [GO:0045444
"fat cell differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0030325 "adrenal
gland development" evidence=IEA] [GO:0010761 "fibroblast migration"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008585 "female gonad development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0006807
"nitrogen compound metabolic process" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0001822
"kidney development" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0051091 GO:GO:0030325 GO:GO:0008585
GO:GO:0048644 GO:GO:0005622 GO:GO:0008584 GO:GO:0044212
GO:GO:0048008 GO:GO:0003713 GO:GO:0009791 GO:GO:0001822
GO:GO:0035264 GO:GO:0045444 GO:GO:0060021 GO:GO:0006807
GO:GO:0060325 GO:GO:0048705 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 GO:GO:0048468 GO:GO:0060613
GO:GO:0010761 OMA:ILPYERF EMBL:CU062554 EMBL:CU928601
RefSeq:XP_003359257.2 Ensembl:ENSSSCT00000011185 GeneID:100622249
KEGG:ssc:100622249 Uniprot:F1RFC2
Length = 945
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 41/157 (26%), Positives = 76/157 (48%)
Query: 381 KRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDE 440
K + +DG A ++ E+ +KP+ + + K+ SN +P VA G+E DE
Sbjct: 26 KDSNNNSDGKAVAKVKCEARSALTKPKNN--HNNCKKVSNEE---KPKVAIGEECRA-DE 79
Query: 441 QVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGES 499
Q AF + + ++R + P + +NL +++A KLGGY+ +T+ + W+ + +
Sbjct: 80 Q-AFLVALYKYMKDRKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 138
Query: 500 FNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
T+ + R YE+ +L YE+ + PL
Sbjct: 139 LGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPL 175
>UNIPROTKB|E2RGA0 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
CTD:138715 OMA:FARRQPV EMBL:AAEX03007945 RefSeq:XP_854656.1
ProteinModelPortal:E2RGA0 Ensembl:ENSCAFT00000028460 GeneID:611843
KEGG:cfa:611843 NextBio:20897379 Uniprot:E2RGA0
Length = 411
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 47/176 (26%), Positives = 77/176 (43%)
Query: 364 ESAAADERSLETKD-EDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLS 422
E A + + E +D E+D+ G++ A+ E T ES P
Sbjct: 42 EGALGEVGTEEEEDAEEDEEGEEAG---AEEEATEESHTGTRGPSSPSSQPPGPHPHE-- 96
Query: 423 FLFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKL 481
+ +E + E + ++ F ++ +F ++R P K+ L+L L+R V
Sbjct: 97 WTYEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAK 156
Query: 482 GGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE---KHRMSNGEL 534
GG EV + K+WR+V + P T T+ ++T R Y K L YE + S GEL
Sbjct: 157 GGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGEL 212
>ZFIN|ZDB-GENE-070103-4 [details] [associations]
symbol:nefmb "neurofilament, medium polypeptide b"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-070103-4 GO:GO:0005198 GO:GO:0005882
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
OrthoDB:EOG4VMFFD KO:K04573 EMBL:BX005158 IPI:IPI00482469
RefSeq:NP_001116752.1 UniGene:Dr.90305 ProteinModelPortal:B0S553
SMR:B0S553 GeneID:100033387 KEGG:dre:100033387 CTD:100033387
OMA:ESICTED NextBio:20787839 Bgee:B0S553 Uniprot:B0S553
Length = 717
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 73/308 (23%), Positives = 120/308 (38%)
Query: 157 LTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMN----PECAAVNESSSEIK 212
+ K AE E+EEK +++ V S ++S +G E A E+++E +
Sbjct: 428 VAKEVAEEAEEEEKEEEEETVAASQAKVSSAAPEGEEEEEEEGGDEEEEAEEGEAAAEEE 487
Query: 213 AENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDEKREKLED 272
E ++ GE+ + V +L G K+ S + E + +E E K + E ++ ED
Sbjct: 488 EEEDEEGEEEEEPQVEVIEETELCGEKSPTS--EKEGSEKEEEEDEGKGEEKEDEDEKED 545
Query: 273 VSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHISKNDEKRE 332
S+ G K + ES + E E S + K EE G + + E+ E
Sbjct: 546 TK-----SEGEGEKKE--ESG----GEEEKKEESGGEEEKKEESGGEEEKKEESGGEE-E 593
Query: 333 KLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDDKRGDKLNDGVAD 392
K +++ E + D K K S E E K +D+K+ DK+
Sbjct: 594 KKEESAGEEAKADSEKDDKKSDTEEDEKKSPVSEEKAESPAEEKKQDEKQVDKVVVANNK 653
Query: 393 MELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFY 452
E + + EV+ E + KE+ EP E E+ AK+VE
Sbjct: 654 EEASPKEEVQTRTVETITNGD--KETKA-----EPEKEEKKPEEKPQEKKKVAKKVEKVA 706
Query: 453 RERNLEFK 460
+ E K
Sbjct: 707 PQVKKEIK 714
>UNIPROTKB|E1C077 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
InterPro:IPR006017 PRINTS:PR01076 GO:GO:0006936 InterPro:IPR006018
Pfam:PF02029 GeneTree:ENSGT00700000104480 EMBL:AADN02006542
EMBL:AADN02006543 EMBL:AADN02006544 EMBL:AADN02006545
EMBL:AADN02006546 IPI:IPI00822280 Ensembl:ENSGALT00000037472
ArrayExpress:E1C077 Uniprot:E1C077
Length = 739
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 79/350 (22%), Positives = 134/350 (38%)
Query: 130 KENSSTKSDGSLVHPLNQHEHVAAEE--RLTKIEA---EN-GEKEEKLDDDSVVGVSAN- 182
KE + + +N VA EE R T EA E +EE+ +
Sbjct: 36 KEEGDVSGEVTEKSEVNAQNSVAEEETKRSTDDEAALLERLARREERRQKRLQEALERQK 95
Query: 183 ELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNG 242
E T DGS P E V E+ + K E K+ + + S + N
Sbjct: 96 EFDPTITDGSLSVPSRREVNNVEENETTGKEE--KVETRQGRCEIEETETVTKSYQRNNW 153
Query: 243 SLNQLECATADERPSEVKAQNDEKREKLE-DVSVDVSASK--LYGTKNDGIESHVLTLNQ 299
+ E +E+ SE + + E+ + DV+V+ S K + TK + + T
Sbjct: 154 RQDGEEEGKKEEKDSEEEKPKEVPTEENQVDVAVEKSTDKEEVVETKTLAVNAENDTNAM 213
Query: 300 LEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMH- 358
LE + +D K +E+ EK + + +++R K ++ K + K
Sbjct: 214 LEGEQSITDAADKEKEEAEKEREKLEAEEKERLKAEEEKKAAEEKQKAEEEKKAAEERER 273
Query: 359 AKNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKES 418
AK + E AA+ER +E+ K ++ A+ E E +++ E E +K
Sbjct: 274 AKAEEEKRAAEERERAKAEEERKAAEERERAKAEEERKAAEERAKAEEERKAAEERAKAE 333
Query: 419 SNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRER-NLEFKHPKFYKE 467
E AE + E+ + A A+E + E+ LE + K K+
Sbjct: 334 EERKAAEERAKAEKERKAAEERERAKAEEEKRAAEEKARLEAEKLKEKKK 383
>UNIPROTKB|E1BVB9 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
InterPro:IPR006017 PRINTS:PR01076 GO:GO:0006936 InterPro:IPR006018
Pfam:PF02029 GeneTree:ENSGT00700000104480 EMBL:AADN02006542
EMBL:AADN02006543 EMBL:AADN02006544 EMBL:AADN02006545
EMBL:AADN02006546 IPI:IPI00680861 Ensembl:ENSGALT00000021344
ArrayExpress:E1BVB9 Uniprot:E1BVB9
Length = 755
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 79/350 (22%), Positives = 134/350 (38%)
Query: 130 KENSSTKSDGSLVHPLNQHEHVAAEE--RLTKIEA---EN-GEKEEKLDDDSVVGVSAN- 182
KE + + +N VA EE R T EA E +EE+ +
Sbjct: 36 KEEGDVSGEVTEKSEVNAQNSVAEEETKRSTDDEAALLERLARREERRQKRLQEALERQK 95
Query: 183 ELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNG 242
E T DGS P E V E+ + K E K+ + + S + N
Sbjct: 96 EFDPTITDGSLSVPSRREVNNVEENETTGKEE--KVETRQGRCEIEETETVTKSYQRNNW 153
Query: 243 SLNQLECATADERPSEVKAQNDEKREKLE-DVSVDVSASK--LYGTKNDGIESHVLTLNQ 299
+ E +E+ SE + + E+ + DV+V+ S K + TK + + T
Sbjct: 154 RQDGEEEGKKEEKDSEEEKPKEVPTEENQVDVAVEKSTDKEEVVETKTLAVNAENDTNAM 213
Query: 300 LEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMH- 358
LE + +D K +E+ EK + + +++R K ++ K + K
Sbjct: 214 LEGEQSITDAADKEKEEAEKEREKLEAEEKERLKAEEEKKAAEEKQKAEEEKKAAEERER 273
Query: 359 AKNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKES 418
AK + E AA+ER +E+ K ++ A+ E E +++ E E +K
Sbjct: 274 AKAEEEKRAAEERERAKAEEERKAAEERERAKAEEERKAAEERAKAEEERKAAEERAKAE 333
Query: 419 SNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRER-NLEFKHPKFYKE 467
E AE + E+ + A A+E + E+ LE + K K+
Sbjct: 334 EERKAAEERAKAEKERKAAEERERAKAEEEKRAAEEKARLEAEKLKEKKK 383
>UNIPROTKB|F1NT51 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030478 "actin cap"
evidence=IEA] InterPro:IPR006017 PRINTS:PR01076 GO:GO:0005886
GO:GO:0006936 GO:GO:0030478 InterPro:IPR006018 Pfam:PF02029
IPI:IPI00572834 GeneTree:ENSGT00700000104480 EMBL:AADN02006542
EMBL:AADN02006543 EMBL:AADN02006544 EMBL:AADN02006545
EMBL:AADN02006546 Ensembl:ENSGALT00000021345 OMA:WRQDGEE
ArrayExpress:F1NT51 Uniprot:F1NT51
Length = 771
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 79/350 (22%), Positives = 134/350 (38%)
Query: 130 KENSSTKSDGSLVHPLNQHEHVAAEE--RLTKIEA---EN-GEKEEKLDDDSVVGVSAN- 182
KE + + +N VA EE R T EA E +EE+ +
Sbjct: 53 KEEGDVSGEVTEKSEVNAQNSVAEEETKRSTDDEAALLERLARREERRQKRLQEALERQK 112
Query: 183 ELSGTRNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNG 242
E T DGS P E V E+ + K E K+ + + S + N
Sbjct: 113 EFDPTITDGSLSVPSRREVNNVEENETTGKEE--KVETRQGRCEIEETETVTKSYQRNNW 170
Query: 243 SLNQLECATADERPSEVKAQNDEKREKLE-DVSVDVSASK--LYGTKNDGIESHVLTLNQ 299
+ E +E+ SE + + E+ + DV+V+ S K + TK + + T
Sbjct: 171 RQDGEEEGKKEEKDSEEEKPKEVPTEENQVDVAVEKSTDKEEVVETKTLAVNAENDTNAM 230
Query: 300 LEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMH- 358
LE + +D K +E+ EK + + +++R K ++ K + K
Sbjct: 231 LEGEQSITDAADKEKEEAEKEREKLEAEEKERLKAEEEKKAAEEKQKAEEEKKAAEERER 290
Query: 359 AKNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKES 418
AK + E AA+ER +E+ K ++ A+ E E +++ E E +K
Sbjct: 291 AKAEEEKRAAEERERAKAEEERKAAEERERAKAEEERKAAEERAKAEEERKAAEERAKAE 350
Query: 419 SNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRER-NLEFKHPKFYKE 467
E AE + E+ + A A+E + E+ LE + K K+
Sbjct: 351 EERKAAEERAKAEKERKAAEERERAKAEEEKRAAEEKARLEAEKLKEKKK 400
>ASPGD|ASPL0000041042 [details] [associations]
symbol:AN2905 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0044732 "mitotic
spindle pole body" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071585 "detoxification
of cadmium ion" evidence=IEA] [GO:0010972 "negative regulation of
G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0071276
"cellular response to cadmium ion" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
EMBL:BN001306 GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
EnsemblFungi:CADANIAT00010184 OMA:TRNMLLR Uniprot:C8VJ78
Length = 980
Score = 129 (50.5 bits), Expect = 0.00020, P = 0.00020
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 444 FAKEVENFYRERNLEFK-HPKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFN- 501
F + ++ F RNL F +P +NL++L+ AV+KLGG +VT+ +W+ + +
Sbjct: 288 FMRSLQKFMMSRNLPFDPNPIVSGRPINLVQLYAAVMKLGGSKKVTAANMWQVIAQQLQF 347
Query: 502 PPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPLHDGSLTEPS--RIESQAAGSQ 555
PP R Y++ L YE+ +S+ + D + +PS R S +G Q
Sbjct: 348 PPVQFPMAVQEIRDLYQRTLAAYEQAFLSSQQKQFAD-QVQQPSIPRQPSDPSGMQ 402
>MGI|MGI:3650624 [details] [associations]
symbol:Arid3c "AT rich interactive domain 3C (BRIGHT-like)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045121 "membrane
raft" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
MGI:MGI:3650624 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045121
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
eggNOG:NOG327790 HOGENOM:HOG000236281 HOVERGEN:HBG050574
InterPro:IPR023334 PROSITE:PS51486 CTD:138715 OMA:FARRQPV
EMBL:AL807796 EMBL:BC141237 IPI:IPI00556830 RefSeq:NP_001017362.1
UniGene:Mm.425179 ProteinModelPortal:A6PWV5 SMR:A6PWV5
PhosphoSite:A6PWV5 PRIDE:A6PWV5 Ensembl:ENSMUST00000084698
Ensembl:ENSMUST00000171251 GeneID:550619 KEGG:mmu:550619
UCSC:uc008sjj.1 InParanoid:B2RUN0 NextBio:414311 Bgee:A6PWV5
Genevestigator:A6PWV5 Uniprot:A6PWV5
Length = 409
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 44/174 (25%), Positives = 78/174 (44%)
Query: 368 ADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLS---FL 424
A E ++ +++ G + +G + L E ++S P S +S + +
Sbjct: 39 APEGAIGVVGAEEEEGAEDEEG--ETPLAEEETAEQSHPGARCPNSPSSQSPGIQPHEWT 96
Query: 425 FEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGG 483
+E + E + ++ F ++ +F ++R P K+ L+L L+R V GG
Sbjct: 97 YEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGG 156
Query: 484 YDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE---KHRMSNGEL 534
EV + K+WR+V + P T T+ ++T R Y K L YE + S GEL
Sbjct: 157 LVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGEL 210
>RGD|1560943 [details] [associations]
symbol:Arid3c "AT rich interactive domain 3C (BRIGHT-like)"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0045121 "membrane raft" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 RGD:1560943
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
OrthoDB:EOG415GF5 CTD:138715 OMA:FARRQPV IPI:IPI00563895
RefSeq:NP_001167452.1 UniGene:Rn.225882 ProteinModelPortal:D3ZQB1
Ensembl:ENSRNOT00000046589 GeneID:502946 KEGG:rno:502946
UCSC:RGD:1560943 NextBio:712863 Uniprot:D3ZQB1
Length = 410
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 45/174 (25%), Positives = 77/174 (44%)
Query: 368 ADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLS---FL 424
A E +L +++ G + D + L E ++S P S +S + +
Sbjct: 39 APEGALGVVGAEEEEGAE-EDEEGETPLVEEETAEQSHPGARCPNSPSGQSPGIQPHEWT 97
Query: 425 FEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGG 483
+E + E + ++ F ++ +F ++R P K+ L+L L+R V GG
Sbjct: 98 YEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGG 157
Query: 484 YDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE---KHRMSNGEL 534
EV + K+WR+V + P T T+ ++T R Y K L YE + S GEL
Sbjct: 158 LVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGEL 211
>UNIPROTKB|G5E585 [details] [associations]
symbol:ARID5B "AT-rich interactive domain-containing
protein 5B" species:9913 "Bos taurus" [GO:0060613 "fat pad
development" evidence=IEA] [GO:0060325 "face morphogenesis"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0048008 "platelet-derived growth factor receptor
signaling pathway" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0030325 "adrenal
gland development" evidence=IEA] [GO:0010761 "fibroblast migration"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008585 "female gonad development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0006807
"nitrogen compound metabolic process" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0001822
"kidney development" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0051091 GO:GO:0030325 GO:GO:0008585
GO:GO:0048644 GO:GO:0005622 GO:GO:0008584 GO:GO:0044212
GO:GO:0048008 GO:GO:0003713 GO:GO:0009791 GO:GO:0001822
GO:GO:0035264 GO:GO:0045444 GO:GO:0060021 GO:GO:0006807
GO:GO:0060325 GO:GO:0048705 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 GO:GO:0048468 GO:GO:0060613
GO:GO:0010761 OMA:ILPYERF EMBL:DAAA02061648 EMBL:DAAA02061649
EMBL:DAAA02061650 EMBL:DAAA02061651 Ensembl:ENSBTAT00000008847
Uniprot:G5E585
Length = 1131
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 387 NDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAK 446
+DG + ++ E+ +KP+ + + K+ SN +P VA G+E DEQ AF
Sbjct: 277 SDGKSVAKVKCEARSALNKPKNN--HNNCKKVSNEE---KPKVAIGEECRA-DEQ-AFLV 329
Query: 447 EVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKT 505
+ + +ER + P + +NL +++A KLGGY+ +T+ + W+ + +
Sbjct: 330 ALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPG 389
Query: 506 CTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
T+ + R YE+ +L YE+ + PL
Sbjct: 390 STSAATCTRRHYERLILPYERFIKGEEDKPL 420
>UNIPROTKB|G3MWU0 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:DAAA02023880 Ensembl:ENSBTAT00000064321 Uniprot:G3MWU0
Length = 385
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 52/199 (26%), Positives = 85/199 (42%)
Query: 368 ADERSL-ETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNL---SF 423
A E+ L E E+++ G + A E + KES+P S + +
Sbjct: 47 APEKGLGEVGAEEEEDGQDEEEEEAGAE---DEAAKESRPGTRGSSSPSSQPPGPHPHEW 103
Query: 424 LFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLG 482
+E + E + ++ F ++ +F ++R P K+ L+L L+R V G
Sbjct: 104 TYEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKG 163
Query: 483 GYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE---KHRMSNGELPLHDG 539
G EV + K+WR+V + P T T+ ++T R Y K L YE + S GEL
Sbjct: 164 GLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQAAID 223
Query: 540 SLTEPSRIESQAAGSQAFG 558
S R ++ A + FG
Sbjct: 224 SNRREGRRQAYTA-APLFG 241
>UNIPROTKB|E1BLP6 [details] [associations]
symbol:ARID5B "AT-rich interactive domain-containing
protein 5B" species:9913 "Bos taurus" [GO:0060612 "adipose tissue
development" evidence=ISS] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0051091 GO:GO:0060612 GO:GO:0006351
GO:GO:0044212 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AAFC03084653
EMBL:AAFC03084656 EMBL:AAFC03084657 EMBL:AAFC03093203
EMBL:AAFC03093204 EMBL:AAFC03093205 EMBL:AAFC03093206
EMBL:AAFC03093207 EMBL:AAFC03122947 IPI:IPI01001966 Uniprot:E1BLP6
Length = 1173
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 387 NDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAK 446
+DG + ++ E+ +KP+ + + K+ SN +P VA G+E DEQ AF
Sbjct: 278 SDGKSVAKVKCEARSALNKPKNN--HNNCKKVSNEE---KPKVAIGEECRA-DEQ-AFLV 330
Query: 447 EVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKT 505
+ + +ER + P + +NL +++A KLGGY+ +T+ + W+ + +
Sbjct: 331 ALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPG 390
Query: 506 CTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
T+ + R YE+ +L YE+ + PL
Sbjct: 391 STSAATCTRRHYERLILPYERFIKGEEDKPL 421
>UNIPROTKB|Q14865 [details] [associations]
symbol:ARID5B "AT-rich interactive domain-containing
protein 5B" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0010761 "fibroblast
migration" evidence=IEA] [GO:0030325 "adrenal gland development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0048008 "platelet-derived growth factor receptor signaling
pathway" evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048644 "muscle organ morphogenesis" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0060325 "face morphogenesis"
evidence=IEA] [GO:0060613 "fat pad development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001889 "liver development" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0060612 "adipose tissue development" evidence=ISS] [GO:0003677
"DNA binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=TAS] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
GO:GO:0045892 GO:GO:0051091 GO:GO:0030325 GO:GO:0008585
GO:GO:0048644 GO:GO:0060612 GO:GO:0001889 GO:GO:0006351
GO:GO:0008584 GO:GO:0044212 GO:GO:0048008 GO:GO:0009791
GO:GO:0001822 GO:GO:0035264 GO:GO:0045444 GO:GO:0060021
GO:GO:0060325 GO:GO:0048705 Gene3D:1.10.150.60 SUPFAM:SSF46774
GO:GO:0048468 GO:GO:0060613 GO:GO:0010761 CTD:84159
eggNOG:NOG115121 OrthoDB:EOG4N5VW9 EMBL:AL671972 EMBL:AC067742
EMBL:AK024803 EMBL:AK296921 EMBL:BC015120 EMBL:BC036831
EMBL:BC066345 EMBL:BC107800 EMBL:M73837 EMBL:BX537690 EMBL:BX641020
IPI:IPI00399164 IPI:IPI00455219 IPI:IPI00908840 PIR:S27963
RefSeq:NP_001231567.1 RefSeq:NP_115575.1 UniGene:Hs.535297 PDB:1IG6
PDB:2OEH PDBsum:1IG6 PDBsum:2OEH ProteinModelPortal:Q14865
SMR:Q14865 IntAct:Q14865 STRING:Q14865 PhosphoSite:Q14865
DMDM:209572763 PaxDb:Q14865 PRIDE:Q14865 DNASU:84159
Ensembl:ENST00000279873 Ensembl:ENST00000309334 GeneID:84159
KEGG:hsa:84159 UCSC:uc001jlt.2 UCSC:uc001jlu.2 UCSC:uc010qil.2
GeneCards:GC10P063661 H-InvDB:HIX0008854 HGNC:HGNC:17362
HPA:HPA015037 MIM:608538 MIM:613065 neXtProt:NX_Q14865
PharmGKB:PA134943193 HOVERGEN:HBG102783 InParanoid:Q14865
OMA:ILPYERF PhylomeDB:Q14865 ChiTaRS:ARID5B
EvolutionaryTrace:Q14865 GenomeRNAi:84159 NextBio:73496 Bgee:Q14865
CleanEx:HS_ARID5B Genevestigator:Q14865 GermOnline:ENSG00000150347
Uniprot:Q14865
Length = 1188
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 42/157 (26%), Positives = 75/157 (47%)
Query: 381 KRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDE 440
K + +DG A ++ E+ +KP+ + K+ SN +P VA G+E DE
Sbjct: 269 KDSNNNSDGKAVAKVKCEARSALTKPKNNHN---CKKVSNEE---KPKVAIGEECRA-DE 321
Query: 441 QVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGES 499
Q AF + + +ER + P + +NL +++A KLGGY+ +T+ + W+ + +
Sbjct: 322 Q-AFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 380
Query: 500 FNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
T+ + R YE+ +L YE+ + PL
Sbjct: 381 LGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPL 417
>MGI|MGI:1930768 [details] [associations]
symbol:Arid3b "AT rich interactive domain 3B (BRIGHT-like)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 MGI:MGI:1930768 GO:GO:0007275
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
eggNOG:NOG327790 HOGENOM:HOG000236281 InterPro:IPR023334
PROSITE:PS51486 HSSP:Q24573 CTD:10620 HOVERGEN:HBG103680
OMA:LFSMARQ EMBL:AF116847 EMBL:AK139455 EMBL:BC049776
IPI:IPI00275919 IPI:IPI00277032 IPI:IPI00652493 RefSeq:NP_062663.1
UniGene:Mm.425588 ProteinModelPortal:Q9Z1N7 SMR:Q9Z1N7
IntAct:Q9Z1N7 STRING:Q9Z1N7 PhosphoSite:Q9Z1N7 PRIDE:Q9Z1N7
Ensembl:ENSMUST00000004780 Ensembl:ENSMUST00000164035
Ensembl:ENSMUST00000171444 GeneID:56380 KEGG:mmu:56380
UCSC:uc009pvt.1 UCSC:uc009pvw.1 InParanoid:Q9Z1N7 OrthoDB:EOG415GF5
NextBio:312460 Bgee:Q9Z1N7 CleanEx:MM_ARID3B Genevestigator:Q9Z1N7
Uniprot:Q9Z1N7
Length = 568
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 100/427 (23%), Positives = 171/427 (40%)
Query: 244 LNQLECATADERPSEVKAQND--EKREKLEDVSVDVSASKLYGTK------NDGIESHVL 295
L Q + ++P + Q D EK+ S + ASKL GT+ G S
Sbjct: 4 LQQQQQQQQQKQPQQPLLQMDAREKQGPQTRESQFLYASKL-GTQPALLSITPGRPSGSS 62
Query: 296 TLNQLEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGI 355
L L ++ + +E+ S+ + + E DD V EV+ K + +
Sbjct: 63 VLGPLARVPPATPVARMSEQSNVNSEPEEEEGGLEDEDGDDD-VAEVA-EKEAQAASKYF 120
Query: 356 HMHAKNQLESAAADERSL-----------ETKDEDDKRGDKLNDGV---ADMELTLESEV 401
HM + E A SL +TK++ K K V +L+ ++
Sbjct: 121 HMQKVTRQEPRATPMSSLLPVPGLSPQGQQTKEDHTKDASKAPPSVPTAGQPSWSLDEQL 180
Query: 402 KES-----KPEVDVGY--EVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRE 454
K++ + D G E+S++ + L +E +GD E+ F ++ F ++
Sbjct: 181 KQNGALAWSDDADGGRGREISRDFAKL---YE---LDGDP-----ERKEFLDDLFIFMQK 229
Query: 455 RNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTF 513
R P K+ L+L L++ V + GG E+ + K+WR++ + N P + T+ ++T
Sbjct: 230 RGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTL 289
Query: 514 RIFYEKALLEYE--KHRMSN-GELPLH-DGSLTE---PSRIESQAAGSQAFGSGXXXXXX 566
R Y K L YE K +S+ EL DG+ E PS S S A +
Sbjct: 290 RTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAAAAAAAAAA 349
Query: 567 XXXXMQGWH-SKRLLGSGEVCQPIIKEKNSSCTTKSDRQIKNIGLLKRKK--PSTVEHSI 623
+ LL S ++ I+ +SS T+ S +I L++ P V + +
Sbjct: 350 AAAASAASAGTPALLSSPKIRFSILGLGSSSGTSASSPRIPPASTLRKGDGVPVPVPNRL 409
Query: 624 QVANVKA 630
V+ A
Sbjct: 410 AVSGTLA 416
>UNIPROTKB|F1MGP2 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
CTD:138715 OMA:FARRQPV EMBL:DAAA02023880 IPI:IPI00842301
RefSeq:XP_002689857.1 RefSeq:XP_600416.3 ProteinModelPortal:F1MGP2
Ensembl:ENSBTAT00000036468 GeneID:522142 KEGG:bta:522142
NextBio:20873455 Uniprot:F1MGP2
Length = 415
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 52/199 (26%), Positives = 85/199 (42%)
Query: 368 ADERSL-ETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNL---SF 423
A E+ L E E+++ G + A E + KES+P S + +
Sbjct: 47 APEKGLGEVGAEEEEDGQDEEEEEAGAE---DEAAKESRPGTRGSSSPSSQPPGPHPHEW 103
Query: 424 LFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLG 482
+E + E + ++ F ++ +F ++R P K+ L+L L+R V G
Sbjct: 104 TYEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKG 163
Query: 483 GYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE---KHRMSNGELPLHDG 539
G EV + K+WR+V + P T T+ ++T R Y K L YE + S GEL
Sbjct: 164 GLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQAAID 223
Query: 540 SLTEPSRIESQAAGSQAFG 558
S R ++ A + FG
Sbjct: 224 SNRREGRRQAYTA-APLFG 241
>UNIPROTKB|K7EJ04 [details] [associations]
symbol:ARID3A "AT-rich interactive domain-containing
protein 3A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005391 EMBL:AC005379
HGNC:HGNC:3031 InterPro:IPR023334 PROSITE:PS51486
Ensembl:ENST00000587532 Uniprot:K7EJ04
Length = 182
Score = 114 (45.2 bits), Expect = 0.00027, P = 0.00027
Identities = 47/175 (26%), Positives = 72/175 (41%)
Query: 462 PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKAL 521
P K+ L+L L+ V + GG EV + KLWR++ + N P + T+ ++T R Y K L
Sbjct: 12 PIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYL 71
Query: 522 LEYE--KHRMSN-GELPLHDGSLTEPSRIESQAAGSQAFGSGXXXXXXXXXXMQGWHSKR 578
YE K +SN EL S R +S A+ G + S
Sbjct: 72 YPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPV-SSLG 130
Query: 579 LLGS--GEVCQPIIKEKNSSCTTKSDRQIKNIGLLKRKKPSTVEHSIQVANVKAT 631
L S G P K K +S RQ + L +++ S+++ + T
Sbjct: 131 LAASTNGSSITPAPKIKKAS----ESRQDSAVNLTGTNGSNSISMSVEINGIMYT 181
>UNIPROTKB|I3L967 [details] [associations]
symbol:ARID3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
InterPro:IPR023334 PROSITE:PS51486 EMBL:CU469022 EMBL:CU638715
Ensembl:ENSSSCT00000023820 OMA:MNIRISG Uniprot:I3L967
Length = 336
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 462 PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKAL 521
P K+ L+L L++ V + GG E+ + K+WR++ + N P + T+ ++T R Y K L
Sbjct: 12 PIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYL 71
Query: 522 LEYE--KHRMSN-GELPLH-DGSLTEPSRIESQAAGSQAFGSGXXXXXXXXXXMQGWHSK 577
YE K +S+ EL DG+ E R S ++ + + G +
Sbjct: 72 YAYECEKKALSSPAELQAAIDGNRREGRR-PSYSSSLFGYSPAGASHAATAAAVTG--AP 128
Query: 578 RLLGSGEVCQPIIKEKNSSCTTKSDRQIKNIGLLKR 613
LL ++ PI+ +SS T S +I L++
Sbjct: 129 ALLSPPKIRFPILGLGSSSGTNASGPRISPATTLRK 164
>TAIR|locus:2207230 [details] [associations]
symbol:AT1G05320 "AT1G05320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00548189 RefSeq:NP_001030972.2
RefSeq:NP_001030973.2 RefSeq:NP_172024.3 UniGene:At.42407
ProteinModelPortal:F4I8Q1 PRIDE:F4I8Q1 EnsemblPlants:AT1G05320.1
EnsemblPlants:AT1G05320.2 EnsemblPlants:AT1G05320.3 GeneID:837031
KEGG:ath:AT1G05320 OMA:TSTIISH Uniprot:F4I8Q1
Length = 790
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 78/351 (22%), Positives = 144/351 (41%)
Query: 128 IAKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGT 187
I K N L+ L HE+V E + +EA K++ + + + N L T
Sbjct: 418 IEKLNQKDTEAKDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEAL-LKLNTLEST 476
Query: 188 RNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQL 247
+ + N + A VN ++ K N G + D F A L K + +L
Sbjct: 477 IEE---LEKENGDLAEVNIKLNQ-KLANQ--GSETDD---FQAKLSVLEAEKYQQA-KEL 526
Query: 248 ECATADERPSEVKAQNDEKREKLEDVSVDVS-ASKLY-GTKNDGIESHVLTLNQLEFAER 305
+ T ++ ++ ++ + R ++ + + + +++Y TKN+ ++ QL+ +
Sbjct: 527 QI-TIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQA----QLQVDKS 581
Query: 306 SSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVS-VNKLCDSKNDGIHMHAKNQLE 364
SD EK S + K E+++ L EV V +L + H H + +
Sbjct: 582 KSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQE--HKHKASDRD 639
Query: 365 SAAADERSLETKDEDDKRGDKLND---GVADMELTLESEVKESKPEVDVGYEVSKE-SSN 420
+E++++ E +++ ++ LE+ +K+S+ E+D V S
Sbjct: 640 --VLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESK 697
Query: 421 LSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKEDLNL 471
L+ L E V D E E +EVE R+ +L F +PK K NL
Sbjct: 698 LNEL-EQKVKLADAKSKETESTGKEEEVEVKSRDSDLSFSNPKQTKIKKNL 747
>DICTYBASE|DDB_G0271058 [details] [associations]
symbol:vilC "villin-like protein C" species:44689
"Dictyostelium discoideum" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR003128 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51089 SMART:SM00262 dictyBase:DDB_G0271058 GO:GO:0007010
EMBL:AAFI02000005 GenomeReviews:CM000150_GR SUPFAM:SSF47050
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626 eggNOG:NOG324767
RefSeq:XP_001134479.1 ProteinModelPortal:Q1ZXP5
EnsemblProtists:DDB0232136 GeneID:8617650 KEGG:ddi:DDB_G0271058
InParanoid:Q1ZXP5 OMA:DSRTEND Uniprot:Q1ZXP5
Length = 1528
Score = 129 (50.5 bits), Expect = 0.00033, P = 0.00033
Identities = 81/350 (23%), Positives = 148/350 (42%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSH--VHPMNPECA-- 202
+ E EERL K + E E+ +K ++D + E+ +D ++ P P
Sbjct: 46 EQEKKDEEERLKK-QKEREERRKKREEDEKI--LKEEMEKLESDKANRITSPKTPTSGSS 102
Query: 203 --AVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQ----LECATA---- 252
A++ S+S N G+ A + K K L + LE
Sbjct: 103 SIALSPSTSSYSISENSGGDSSTSLLSAQAISAKEEREKRRKELEEEAKKLELEQQKIRE 162
Query: 253 --DERPSEVKAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIK 310
++R E + Q +E++ KL+D+ + K+ K + E+ L + E E+ K
Sbjct: 163 EREKRKEERRLQQEEEQRKLQDLLDKKDSEKIEKLKQE--ENEKLEKEEKERIEKELTDK 220
Query: 311 AKNEEKGEKSDDHISKNDEKR--EKLDDALVFEVSVNKLCDS-KNDGIHMHAKNQLESAA 367
+ EEK E +D + EK +KL+ E +L D + + + K++ E
Sbjct: 221 KEKEEK-ELADKLEKERQEKELADKLEKEKK-EKEEKELADKLEKERLDKEKKDKEEKEL 278
Query: 368 ADERSLETKDEDDKRGDKLNDG--VADMELTLESEVKESKP--EVDVGYEVSKESSNLSF 423
AD+ LE + ++ + +KL +AD +L E + KE K E ++ +++KE
Sbjct: 279 ADK--LEKESQEKELAEKLEKEKELAD-KLEKEQKEKEEKERQEKELADKLAKEQKEKE- 334
Query: 424 LFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKEDLNLLK 473
E +A+ E +++++A E E +E + + K KE L L+
Sbjct: 335 --EKELADKLEKERQEKELADKLEKEKQEKELADKLEKEKQEKESLEKLE 382
Score = 127 (49.8 bits), Expect = 0.00055, P = 0.00055
Identities = 63/278 (22%), Positives = 116/278 (41%)
Query: 149 EHVAAEERLT-KIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNES 207
E + E+ L K+E E EKEEK + + + + + + E E
Sbjct: 293 EKLEKEKELADKLEKEQKEKEEKERQEKELADKLAKEQKEKEEKELADKLEKE-RQEKEL 351
Query: 208 SSEIKAENNK--MGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDE 265
+ +++ E + + +KL+ S +KL K L E+ + + + E
Sbjct: 352 ADKLEKEKQEKELADKLEKEKQEKESLEKLEKEKQEKELADKLAKEQKEKEEKEEKEEKE 411
Query: 266 KREKLEDVSVDVS-ASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHI 324
K+EK E D A+ + + +E L + E E+ K + E+ ++ D +
Sbjct: 412 KQEKEEKERKDKELAAAAAAAETEKLEKERLEKEKKELEEKELAEKLEKEKLEKELTDKL 471
Query: 325 SKNDEKREK-LDDALVFEVSVNKLCDS-KNDGIHMHAKNQLESAAADERSLETKDEDDKR 382
K EK+EK L D L E +L D + + K + E AD+ LE + +D +
Sbjct: 472 EK--EKKEKELADKLEKEKQDKELADKLEKEQKEKEEKQRKEKELADK--LEKEKQDKEL 527
Query: 383 GDKL---NDGVADMELTLESEVKESKPEVDVGYEVSKE 417
DKL + E L ++++ K + ++ +V+KE
Sbjct: 528 ADKLAKEKEEKERKEKELADKLEKEKKDKELADKVTKE 565
>UNIPROTKB|Q8IVW6 [details] [associations]
symbol:ARID3B "AT-rich interactive domain-containing
protein 3B" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.150.60
SUPFAM:SSF46774 eggNOG:NOG327790 HOGENOM:HOG000236281
InterPro:IPR023334 PROSITE:PS51486 EMBL:AF116846 EMBL:AB208830
EMBL:AC100835 EMBL:BC041792 IPI:IPI00328266 IPI:IPI00793438
IPI:IPI00853367 RefSeq:NP_006456.1 UniGene:Hs.655532 HSSP:Q24573
ProteinModelPortal:Q8IVW6 SMR:Q8IVW6 STRING:Q8IVW6
PhosphoSite:Q8IVW6 DMDM:152013359 PaxDb:Q8IVW6 PRIDE:Q8IVW6
Ensembl:ENST00000346246 GeneID:10620 KEGG:hsa:10620 UCSC:uc002ayc.3
UCSC:uc002ayd.3 UCSC:uc002aye.3 CTD:10620 GeneCards:GC15P074833
HGNC:HGNC:14350 MIM:612457 neXtProt:NX_Q8IVW6 PharmGKB:PA134896829
HOVERGEN:HBG103680 InParanoid:Q8IVW6 OMA:LFSMARQ GenomeRNAi:10620
NextBio:40352 ArrayExpress:Q8IVW6 Bgee:Q8IVW6 CleanEx:HS_ARID3B
Genevestigator:Q8IVW6 Uniprot:Q8IVW6
Length = 561
Score = 131 (51.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 78/341 (22%), Positives = 142/341 (41%)
Query: 302 FAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKN 361
F + + + + E+ G + +D + E EK A V K+ ++ D N
Sbjct: 82 FERGNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKV--ARQDPRVAPMSN 139
Query: 362 QLESAAADERSLETKDEDDKRGDKLNDGVADM---ELTLESEVKES-----KPEVDVGY- 412
L + + K++ K K + V+ L+ ++K++ + D G
Sbjct: 140 LLPAPGLPPHGQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRG 199
Query: 413 -EVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLN 470
E+S++ + L +E +GD E+ F ++ F ++R P K+ L+
Sbjct: 200 REISRDFAKL---YE---LDGDP-----ERKEFLDDLFVFMQKRGTPINRIPIMAKQILD 248
Query: 471 LLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE--KHR 528
L L++ V + GG E+ + K+WR++ + N P + T+ ++T R Y K L YE K
Sbjct: 249 LYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKA 308
Query: 529 MSN-GELPLH-DGSLTEPSRIESQAAGSQAFGSGXXXXXXXXXXMQGWHSKRLLGSGEVC 586
+S+ EL DG+ E R + S FG G + LL ++
Sbjct: 309 LSSPAELQAAIDGNRREGRR---PSYSSSLFGYSPAAATAAAAA--G--APALLSPPKIR 361
Query: 587 QPIIKEKNSSCTTKSDRQIKNIGLLKRKKPSTVEHSIQVAN 627
PI+ +SS T S +I L++ + V ++ V N
Sbjct: 362 FPILGLGSSSGTNTSSPRISPATTLRKGDGAPVT-TVPVPN 401
Score = 38 (18.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 161 EAENGEKEEKLDDDSVVGVSANE 183
E E+G E++ DD V V+ E
Sbjct: 92 EEEDGGLEDEDGDDEVAEVAEKE 114
>RGD|1306335 [details] [associations]
symbol:Arid3b "AT rich interactive domain 3B (Bright like)"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
RGD:1306335 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR023334 PROSITE:PS51486 IPI:IPI00370524
Ensembl:ENSRNOT00000026736 UCSC:RGD:1306335 ArrayExpress:D4A102
Uniprot:D4A102
Length = 560
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 71/318 (22%), Positives = 124/318 (38%)
Query: 313 NEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERS 372
+E+ S+ + + E DD V EV+ K + + HM + E AA S
Sbjct: 75 SEQSNVNSEPEEEEGGLEDEDGDDD-VTEVA-EKEAQAASKYFHMQKATRQEPRAAPMSS 132
Query: 373 LETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEG 432
L +G D D S +P ++ ++ K++ L++ + G
Sbjct: 133 LLPAPGLPPQGQTKEDHTKDASKAPPSVPTAGQPSWNLDEQL-KQNGALAWSDDADGGRG 191
Query: 433 DESGTE-------D---EQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKL 481
E + D E+ F ++ F ++R P K+ L+L L++ V +
Sbjct: 192 REISRDFAKLYELDGDPERKEFLDDLFIFMQKRGTPINRIPIMAKQILDLYMLYKLVTEK 251
Query: 482 GGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYE--KHRMSN-GELPLH- 537
GG E+ + K+WR++ + N P + T+ ++T R Y K L YE K +S+ EL
Sbjct: 252 GGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAI 311
Query: 538 DGSLTEPSR--IESQAAGSQAFGSGXXXXXXXXXXMQGWHSKRLLGSGEVCQPIIKEKNS 595
DG+ E R S G + + LL ++ I+ +S
Sbjct: 312 DGNRREGRRPSYSSSLFGYSPAAAAAAAAAAAAASAASAGAPALLSPPKIRFSILGLGSS 371
Query: 596 SCTTKSDRQIKNIGLLKR 613
S T S +I L++
Sbjct: 372 SGTNTSSPRIPPASTLRK 389
>ZFIN|ZDB-GENE-070112-1882 [details] [associations]
symbol:zgc:158706 "zgc:158706" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 ZFIN:ZDB-GENE-070112-1882 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00510000046413
EMBL:CR925751 IPI:IPI00608314 Ensembl:ENSDART00000142431
Bgee:F1QH68 Uniprot:F1QH68
Length = 606
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 428 PVAEGDESGTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDE 486
P E G E + F K++ F ++R + P + +++ +++ V +LGGY +
Sbjct: 10 PQERSTELGDEMSEERFLKDLYLFMKDRGTPIERIPHLGFKQIDMFLMYKTVKELGGYQQ 69
Query: 487 VTSCKLWRQVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHR 528
VT+ +LW++V T+ + R YEK LL YE H+
Sbjct: 70 VTTQQLWKKVYNILGGNPRSTSAATCTRRHYEKLLLPYECHQ 111
>UNIPROTKB|F1NAR1 [details] [associations]
symbol:ARID5B "AT-rich interactive domain-containing
protein 5B" species:9031 "Gallus gallus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0001822 "kidney development" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0006807 "nitrogen compound metabolic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008585
"female gonad development" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0010761 "fibroblast
migration" evidence=IEA] [GO:0030325 "adrenal gland development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0048008 "platelet-derived growth factor receptor
signaling pathway" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060325 "face
morphogenesis" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0051091 GO:GO:0005622 GO:GO:0044212
GO:GO:0048008 GO:GO:0003713 GO:GO:0045444 GO:GO:0006807
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00510000046413
GO:GO:0010761 IPI:IPI00580568 OMA:ILPYERF EMBL:AADN02035211
EMBL:AADN02035212 EMBL:AADN02035213 Ensembl:ENSGALT00000004734
Uniprot:F1NAR1
Length = 1092
Score = 126 (49.4 bits), Expect = 0.00048, P = 0.00048
Identities = 45/162 (27%), Positives = 75/162 (46%)
Query: 381 KRGDKLNDGVADMELTLESE-VKESKPEVDVGYEVSKES-SNL---SFLFEPPVAEGDES 435
+R D LN G+ D ES+ V + K E K + SN S + +A G+E
Sbjct: 169 QRRDSLN-GIKDSNNNSESKAVAKVKCEAKSALPKPKSNNSNCKKGSSEDKSKIAVGEEC 227
Query: 436 GTEDEQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWR 494
DEQ AF + + +ER + P + +NL +++A KLGGY+ +T+ + W+
Sbjct: 228 RA-DEQ-AFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWK 285
Query: 495 QVGESFNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
+ + T+ + R YE+ +L YE+ + PL
Sbjct: 286 HIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPL 327
>ZFIN|ZDB-GENE-100525-3 [details] [associations]
symbol:arid5a "AT rich interactive domain 5A
(MRF1-like)" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
ZFIN:ZDB-GENE-100525-3 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00510000046413
EMBL:CABZ01070469 EMBL:CABZ01070470 IPI:IPI00886572
Ensembl:ENSDART00000115398 Bgee:F1QHS9 Uniprot:F1QHS9
Length = 600
Score = 131 (51.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 380 DKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTED 439
D RG+ ++ ++E + + + P G S S+N S + D+S E
Sbjct: 17 DPRGE-VDAAEGELEDCEKKNQELNSPNQTNGEMESLTSTNSS----EDNSRSDQS--ES 69
Query: 440 EQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGE 498
E+ F + F +ERN + P + +NL K+++AV LGGYD VT+ + W+ V +
Sbjct: 70 EERTFITNLYCFMKERNTPIERIPHLGFKQINLWKIYKAVETLGGYDAVTARRQWKNVYD 129
Query: 499 SFNPPKTCTTVSWTFRIFYEKALLEYEKHRMSNGELPL 536
T+ + R YE+ +L +E+ + PL
Sbjct: 130 ELGGSPGSTSAATCTRRHYERLVLPFERQLRGEEDKPL 167
Score = 38 (18.4 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 584 EVCQPIIKEKNSSCTTKSDRQIKNIGLLKRKKPSTVEHSIQVANVKATNPQLDTMVIDIG 643
EV P+ K+K + + + ++ G L+R + HS Q +N + + D + +
Sbjct: 256 EVISPLEKKKRLAQASLTIPASEDGGELERPSVIHISHSSQ-SNTRGRHSS-DGSPVPVS 313
Query: 644 PPA 646
P+
Sbjct: 314 SPS 316
>ZFIN|ZDB-GENE-070209-182 [details] [associations]
symbol:arid3b "AT rich interactive domain 3B
(Bright like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 ZFIN:ZDB-GENE-070209-182
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 eggNOG:NOG327790 HOGENOM:HOG000236281
InterPro:IPR023334 PROSITE:PS51486 CTD:10620 OrthoDB:EOG415GF5
EMBL:CR376821 EMBL:CU181885 EMBL:FP017193 EMBL:BC131867
IPI:IPI00915616 RefSeq:NP_001076471.1 UniGene:Dr.150509 SMR:A2RRV2
Ensembl:ENSDART00000103470 GeneID:571249 KEGG:dre:571249
HOVERGEN:HBG095882 InParanoid:A2RRV2 OMA:NANTREE NextBio:20890475
Uniprot:A2RRV2
Length = 537
Score = 122 (48.0 bits), Expect = 0.00051, P = 0.00051
Identities = 64/262 (24%), Positives = 114/262 (43%)
Query: 294 VLTLNQLEFAERSSDI--KAKNEEKGEKSDDHISKNDE-KREKLDDALVFEVSVNKLCDS 350
V T + L E ++D + + E E DD + ++ E+ + L F +
Sbjct: 38 VKTASDLAHEEDAADEMDRGRGSEGDEDDDDEMMDGEDGSEEEESEGLEFLRKQSLALQQ 97
Query: 351 KNDGIHMHA--KNQLESAAADERSL----ETKDE-DDKRGDKLN----DGVADMEL--TL 397
G+ ++ +AA +R L + KDE +D D+ + +G+ D L +
Sbjct: 98 AAVGVPPYSFPVYTASPSAAKKRPLSPTTKVKDEPEDSLSDQQSFNTPNGMGDWNLDDSF 157
Query: 398 ESEVKES-KPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTEDEQVAFAKEVENFYRERN 456
+ S E D G + S + + L+E + D E F ++ + ++R
Sbjct: 158 KQNGNSSWNEEGDGGRSRGEASRDFAKLYE---LDNDPKRKE-----FLDDLFAYMQKRG 209
Query: 457 LEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNPPKTCTTVSWTFRI 515
P K+ L+L L++ V + GG EV + K+WR++ + N P + T+ ++T R
Sbjct: 210 TPVNRIPIMAKQVLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRT 269
Query: 516 FYEKALLEYE--KHRMSN-GEL 534
Y K L YE K +S+ GEL
Sbjct: 270 QYMKYLYPYECEKKGLSSPGEL 291
>ZFIN|ZDB-GENE-090506-9 [details] [associations]
symbol:smc1a "structural maintenance of chromosomes
1A" species:7955 "Danio rerio" [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-090506-9 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 CTD:8243 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CR354431 IPI:IPI00506664 RefSeq:NP_001155103.1
UniGene:Dr.120420 Ensembl:ENSDART00000078148 GeneID:559665
KEGG:dre:559665 OMA:ERIRHAN NextBio:20883076 Uniprot:E7F0X6
Length = 1232
Score = 126 (49.4 bits), Expect = 0.00055, P = 0.00055
Identities = 55/299 (18%), Positives = 128/299 (42%)
Query: 130 KENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRN 189
++ K++ ++ +++AAE + K E E E+ ++L D+ V +L +
Sbjct: 171 RKKEMVKAEEDTQFSYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYH 230
Query: 190 DGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLEC 249
+ + +N E + N + + + + + E+L + + + +
Sbjct: 231 NEEEIEKLNRELSQRNREIDKDRKKMDHVEEELKDKKKELGRMMR-DQQNVEKEIKEKDA 289
Query: 250 ATADERPSEVKAQND--EKREKLEDVSVDV-SASKLYGTKNDGIESHVLTLNQLEFAERS 306
+RP +KA+ + K +KLE + +A K+Y + IE +E + +
Sbjct: 290 ELNQKRPQYIKAKENTAHKIKKLEVARKSLQNAQKMYKKRKADIEELDREQGAVEMSRQE 349
Query: 307 SDIKAKNEEKGEKSDDHISKNDEKR-EKLDD-----ALVFEVSVNKLC-DSK--NDGIHM 357
+ + + E + + D + +N K+ +L + A + K D K D + +
Sbjct: 350 FEERMEEEAQSQGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDL 409
Query: 358 HAKNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
+ ++E+ A ++ + +E+ KR +KL D +A +L+ E + + E+ E++K
Sbjct: 410 EERKKIETEAKIKQKIREIEENQKRIEKLEDYIATSRQSLD-EQRRMEEELTEEVELAK 467
>RGD|1308736 [details] [associations]
symbol:Hmgn5b species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA]
InterPro:IPR000079 Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355
SMART:SM00527 GO:GO:0005634 GO:GO:0006355 GO:GO:0000785
GO:GO:0006351 GO:GO:0016568 GO:GO:0031492 OrthoDB:EOG4CZBHP
CTD:79366 eggNOG:NOG134182 HOGENOM:HOG000070450 HOVERGEN:HBG052673
EMBL:BC168165 IPI:IPI00914200 RefSeq:NP_001128178.1
UniGene:Rn.25395 PRIDE:B4F777 Ensembl:ENSRNOT00000047672
GeneID:681284 KEGG:rno:681284 UCSC:RGD:1597988 RGD:1597988
NextBio:720567 Genevestigator:B4F777 Uniprot:B4F777
Length = 429
Score = 120 (47.3 bits), Expect = 0.00060, P = 0.00060
Identities = 70/286 (24%), Positives = 115/286 (40%)
Query: 204 VNESSSEI-KAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEV--K 260
+ E+ E+ K E N + A + A K+ + +N+ E+ V K
Sbjct: 60 IPETKPEVVKGECNMENAENGEAKIIEAPISKMETEEVKEQINEDTEGDGGEKKEAVVTK 119
Query: 261 AQNDEKREKLEDVSVDVSASKLYGTKNDGIESH-------VLTLNQLEFAERSSDIKAKN 313
+NDE ++DV D + T +G + + ++E A+ + D + K
Sbjct: 120 GKNDELEANIQDVEKDEDEKEHEDTGEEGEDGEREGGLKEKPDVAEIEDAKEAKDDEEK- 178
Query: 314 EEKGEKSDDHISKNDEKREKLDDALVF---EVSVNKLCDSK-NDG---IHMHAKNQLESA 366
E+K EK DD ++ EK D+ EV + +++ +DG + + + + ES
Sbjct: 179 EDK-EKEDDKGGDGKKEEEKDDEGEAETEEEVKEQQKEETEGDDGKCKVEENKEGRKESQ 237
Query: 367 AADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFE 426
+E E +ED K DG D+ E + KE E + G E E L E
Sbjct: 238 HEEEGKEELHEEDGKEDLHEEDGKEDLH---EEDGKEDLHEEE-GKEDLHEEEGKEDLHE 293
Query: 427 PPVAEG--DESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKEDLN 470
E +E G ED KE + + E E H + KEDL+
Sbjct: 294 EEGKEDLHEEEGKEDLHEEEGKE--DLHEEEGKEDLHEEEGKEDLH 337
>UNIPROTKB|D4A2K3 [details] [associations]
symbol:LOC680182 "RCG38177, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0000785 "chromatin" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA]
InterPro:IPR000079 Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355
SMART:SM00527 GO:GO:0005634 GO:GO:0000785 GO:GO:0031492
GeneTree:ENSGT00690000102194 OrthoDB:EOG4CZBHP EMBL:CH473969
IPI:IPI00763742 RefSeq:XP_003754848.1 Ensembl:ENSRNOT00000048744
GeneID:100910616 KEGG:rno:100910616 UCSC:RGD:1595442 RGD:1595442
NextBio:687020 Uniprot:D4A2K3
Length = 429
Score = 120 (47.3 bits), Expect = 0.00060, P = 0.00060
Identities = 70/286 (24%), Positives = 115/286 (40%)
Query: 204 VNESSSEI-KAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEV--K 260
+ E+ E+ K E N + A + A K+ + +N+ E+ V K
Sbjct: 60 IPETKPEVVKGECNMENAENGEAKIIEAPISKMETEEVKEQINEDTEGDGGEKKEAVVTK 119
Query: 261 AQNDEKREKLEDVSVDVSASKLYGTKNDGIESH-------VLTLNQLEFAERSSDIKAKN 313
+NDE ++DV D + T +G + + ++E A+ + D + K
Sbjct: 120 GKNDELEANIQDVEKDEDEKEHEDTGEEGEDGEREGGLKEKPDVAEIEDAKEAKDDEEK- 178
Query: 314 EEKGEKSDDHISKNDEKREKLDDALVF---EVSVNKLCDSK-NDG---IHMHAKNQLESA 366
E+K EK DD ++ EK D+ EV + +++ +DG + + + + ES
Sbjct: 179 EDK-EKEDDKGGDGKKEEEKDDEGEAETEEEVKEQQKEETEGDDGKCKVEENKEGRKESQ 237
Query: 367 AADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFE 426
+E E +ED K DG D+ E + KE E + G E E L E
Sbjct: 238 HEEEGKEELHEEDGKEDLHEEDGKEDLH---EEDGKEDLHEEE-GKEDLHEEEGKEDLHE 293
Query: 427 PPVAEG--DESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKEDLN 470
E +E G ED KE + + E E H + KEDL+
Sbjct: 294 EEGKEDLHEEEGKEDLHEEEGKE--DLHEEEGKEDLHEEEGKEDLH 337
>ZFIN|ZDB-GENE-031112-4 [details] [associations]
symbol:stm "starmaker" species:7955 "Danio rerio"
[GO:0009590 "detection of gravity" evidence=IMP] [GO:0043049 "otic
placode formation" evidence=IEP] [GO:0005576 "extracellular region"
evidence=IEA] ZFIN:ZDB-GENE-031112-4 GO:GO:0005576 eggNOG:NOG12793
GO:GO:0043049 GeneTree:ENSGT00550000074777 GO:GO:0009590
EMBL:AY372242 EMBL:CT574549 EMBL:BC129155 IPI:IPI00482673
RefSeq:NP_942112.2 UniGene:Dr.79127 Ensembl:ENSDART00000105174
GeneID:386700 KEGG:dre:386700 CTD:20882 HOVERGEN:HBG095247
OMA:RPGDHSQ NextBio:20813980 Bgee:A2VD23 Uniprot:A2VD23
Length = 613
Score = 122 (48.0 bits), Expect = 0.00062, P = 0.00062
Identities = 70/321 (21%), Positives = 126/321 (39%)
Query: 132 NSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDG 191
+S + DG + +E K E +K++ D DS + + +D
Sbjct: 195 DSDSAPDGDSASAEKTDSDHSPDEDANKSSTE-ADKDDTSDKDS--SQTDEKHDSDASDK 251
Query: 192 SHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLS-GSKTNGSLNQLECA 250
H E + +SS + + ++ + +K D + A +K S SK + S +Q
Sbjct: 252 DEKHEDKDEKSDEKDSSKDSEDKSQEKSDKSDDGSNSEADEQKESVESKDHDSDSQ---- 307
Query: 251 TADERPSEVKAQNDEKREKLEDVS----VDVSASKLYGTKNDGIESHVLTLNQLEFAERS 306
D +E K ++D+K + D + D K + + D E H + E
Sbjct: 308 --DSDSAEKKEKHDDKDQDSSDSADSKDSDEDKDKDHSEQKDS-EDHEHKEKHTKDKEEH 364
Query: 307 SDI-KAKNEEKGEKSDDHISKNDEKRE--KLDDALVFEVSVNKLCDSKNDGIHMHAKNQL 363
D + K++E KSD+H E +E K D++ E +K DS N H+ +
Sbjct: 365 KDSDEGKDDEDKSKSDEHDKDESESKEASKSDESEQEEKKDDK-SDSDNSSRDSHSDSDS 423
Query: 364 ESAA---ADERSLETKDED-DKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESS 419
+S + +D S D D D D +D +D + +S+ + + D + S ES
Sbjct: 424 DSHSDSDSDSHSDSHSDSDSDSHSDSDSDSDSDSDSDSDSDSDSNSRDKDEKKDKSSESR 483
Query: 420 NLSFLFEPPVAEGDESGTEDE 440
+ + + S T +E
Sbjct: 484 DEDSSDSDSKSNSESSETAEE 504
Score = 122 (48.0 bits), Expect = 0.00062, P = 0.00062
Identities = 82/393 (20%), Positives = 139/393 (35%)
Query: 31 GETNVDVKDPPFSI--PEKNQDDMSSDNIDLQTDNNDVMSVGLPS-DNNGSVDNQTADDV 87
G+ + D K+ P + PE D + D + D S P D N S DD
Sbjct: 175 GKDSTDSKESPDTTDKPEGPDSDSAPDGDSASAEKTD--SDHSPDEDANKSSTEADKDDT 232
Query: 88 --KVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPL 145
K ++ D + + + D ++E S DGS
Sbjct: 233 SDKDSSQTDEKHDSDASDKDEKHEDKDEKSDEKDSSKDSEDK-SQEKSDKSDDGSNSEAD 291
Query: 146 NQHEHVAAEERLTKIE-AENGEKEEKLDD-DSVVGVSANELSGTRN-DGSHVHPMNPECA 202
Q E V +++ + + +++ EK+EK DD D SA+ + D H + E
Sbjct: 292 EQKESVESKDHDSDSQDSDSAEKKEKHDDKDQDSSDSADSKDSDEDKDKDHSEQKDSEDH 351
Query: 203 AVNESSSEIKAENNKMGEKLDGAAVFYASA--KKLSGSKTNGSLNQLECATA-DERPSEV 259
E ++ K E+ E D + K S SK ++ E D++
Sbjct: 352 EHKEKHTKDKEEHKDSDEGKDDEDKSKSDEHDKDESESKEASKSDESEQEEKKDDKSDSD 411
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDG-IESHVLTLNQLEF---AERSSDIKAKNEE 315
+ D + D D + + +D +SH + + + ++ SD + + +
Sbjct: 412 NSSRDSHSDSDSDSHSDSDSDSHSDSHSDSDSDSHSDSDSDSDSDSDSDSDSDSDSNSRD 471
Query: 316 KGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLET 375
K EK D DE D E S D+ +D K++ +S+ D S+E
Sbjct: 472 KDEKKDKSSESRDEDSSDSDSKSNSESSETAEEDTNDDKDSSVEKDKTDSS--DSASVEA 529
Query: 376 KDEDDKRGDKLNDGVADMELTLESEVKESKPEV 408
D DD+ D D E + E +V
Sbjct: 530 NDSDDEHDDDSKDATPSSEDHTAEKTDEDSHDV 562
>GENEDB_PFALCIPARUM|PF14_0563 [details] [associations]
symbol:PF14_0563 "DEAD-box RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 KO:K01509 RefSeq:XP_001348737.1
ProteinModelPortal:Q8IKP1 PRIDE:Q8IKP1
EnsemblProtists:PF14_0563:mRNA GeneID:812145 KEGG:pfa:PF14_0563
EuPathDB:PlasmoDB:PF3D7_1459000 HOGENOM:HOG000281979 OMA:DKKQPDD
ProtClustDB:CLSZ2501093 Uniprot:Q8IKP1
Length = 741
Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
Identities = 99/452 (21%), Positives = 175/452 (38%)
Query: 32 ETNVDVKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDN-QTADDVKVN 90
E N + + P + E D+ SD D+N P D+N S D Q ADD K N
Sbjct: 36 EENSNDDNKPGDVKEPADDNKPSDKKQ-PDDDNKYSDKKQPDDDNKSSDKKQPADDNKDN 94
Query: 91 T---NVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLNQ 147
NV ++ N+ +G N K N S S + LN+
Sbjct: 95 AGSDNVMNMFLNYLQKNKDDPAILQTMMSMMSGQN-------KNNLSASDLLSFTNSLNK 147
Query: 148 HEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNES 207
E+ + + EN E L + S + ++ E + ++ S N + +S
Sbjct: 148 KGEEKGEKNKEEEKKENEMPSEDLKNPSEL-ITKEEKN--EDNISTSDTQNVSNNIITKS 204
Query: 208 SSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQND--E 265
S+ K N+ + Y+ ++K+SG + + N E ++ S + ND E
Sbjct: 205 ESDTKQNNDSSSNNNNNNN--YSVSEKVSGEENTNNNNNEE--VVKKKHSVLVEDNDDYE 260
Query: 266 KREKLEDVS-VDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDD-- 322
E +E V+ A + N + N L F+ SS I+ N + ++S D
Sbjct: 261 IEETVEPKEPVEEEAISIIENININNKEKEKKGNDL-FSPTSSSIENNNNDNNKESSDFK 319
Query: 323 -HISKNDEKREKLDDALVFEVSVNK-LCDSKNDGIHMH---AKNQLESAAADERSLETKD 377
+ SKN + K+D+ L+ ++ K L SK + + N+ A + S +T
Sbjct: 320 LYHSKNTWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSSNKNLIAQSQNGSGKTLT 379
Query: 378 EDDKRGDKLNDGVADMELTLESEVKE-SKPEVDVGYEVSKESSNLSFLFEPPVAEGDESG 436
K+N ++ ++ +E S+ DV +K + FL P ++SG
Sbjct: 380 FVIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYLNVKVFLAVPLCERYNKSG 439
Query: 437 TEDEQVAFAKEVENFYRERNLEFKHPKFYKED 468
V + +F + + ++ K+ K + D
Sbjct: 440 GYQIYVGTPGKTLDFLKRKFIDTKNIKLFVLD 471
>UNIPROTKB|Q8IKP1 [details] [associations]
symbol:PF14_0563 "DEAD box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 KO:K01509 RefSeq:XP_001348737.1
ProteinModelPortal:Q8IKP1 PRIDE:Q8IKP1
EnsemblProtists:PF14_0563:mRNA GeneID:812145 KEGG:pfa:PF14_0563
EuPathDB:PlasmoDB:PF3D7_1459000 HOGENOM:HOG000281979 OMA:DKKQPDD
ProtClustDB:CLSZ2501093 Uniprot:Q8IKP1
Length = 741
Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
Identities = 99/452 (21%), Positives = 175/452 (38%)
Query: 32 ETNVDVKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDN-QTADDVKVN 90
E N + + P + E D+ SD D+N P D+N S D Q ADD K N
Sbjct: 36 EENSNDDNKPGDVKEPADDNKPSDKKQ-PDDDNKYSDKKQPDDDNKSSDKKQPADDNKDN 94
Query: 91 T---NVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLNQ 147
NV ++ N+ +G N K N S S + LN+
Sbjct: 95 AGSDNVMNMFLNYLQKNKDDPAILQTMMSMMSGQN-------KNNLSASDLLSFTNSLNK 147
Query: 148 HEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAAVNES 207
E+ + + EN E L + S + ++ E + ++ S N + +S
Sbjct: 148 KGEEKGEKNKEEEKKENEMPSEDLKNPSEL-ITKEEKN--EDNISTSDTQNVSNNIITKS 204
Query: 208 SSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQND--E 265
S+ K N+ + Y+ ++K+SG + + N E ++ S + ND E
Sbjct: 205 ESDTKQNNDSSSNNNNNNN--YSVSEKVSGEENTNNNNNEE--VVKKKHSVLVEDNDDYE 260
Query: 266 KREKLEDVS-VDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDD-- 322
E +E V+ A + N + N L F+ SS I+ N + ++S D
Sbjct: 261 IEETVEPKEPVEEEAISIIENININNKEKEKKGNDL-FSPTSSSIENNNNDNNKESSDFK 319
Query: 323 -HISKNDEKREKLDDALVFEVSVNK-LCDSKNDGIHMH---AKNQLESAAADERSLETKD 377
+ SKN + K+D+ L+ ++ K L SK + + N+ A + S +T
Sbjct: 320 LYHSKNTWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSSNKNLIAQSQNGSGKTLT 379
Query: 378 EDDKRGDKLNDGVADMELTLESEVKE-SKPEVDVGYEVSKESSNLSFLFEPPVAEGDESG 436
K+N ++ ++ +E S+ DV +K + FL P ++SG
Sbjct: 380 FVIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYLNVKVFLAVPLCERYNKSG 439
Query: 437 TEDEQVAFAKEVENFYRERNLEFKHPKFYKED 468
V + +F + + ++ K+ K + D
Sbjct: 440 GYQIYVGTPGKTLDFLKRKFIDTKNIKLFVLD 471
>UNIPROTKB|E1BQV7 [details] [associations]
symbol:E1BQV7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0046777 "protein autophosphorylation"
evidence=IEA] InterPro:IPR000719 InterPro:IPR001943
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR022165 Pfam:PF00069 Pfam:PF12474
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50151
SMART:SM00220 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0046777 OMA:DARWTTS
GeneTree:ENSGT00690000101752 EMBL:AADN02030845 EMBL:AADN02030846
IPI:IPI00588830 ProteinModelPortal:E1BQV7
Ensembl:ENSGALT00000013539 Uniprot:E1BQV7
Length = 1213
Score = 125 (49.1 bits), Expect = 0.00069, P = 0.00069
Identities = 70/333 (21%), Positives = 156/333 (46%)
Query: 153 AEERLTKIEAENGEKEEKLDD-DSVVGVSANE-LSGTRNDGSHVHPMNPECAAVNESSSE 210
A+ +T+ E E+G+ E++ ++ DS + + A++ S + S + A+V ES SE
Sbjct: 307 AKAEVTE-EVEDGKDEDEEEETDSSLQLPADKRASSDLSIASSEEDKLSQNASVLESLSE 365
Query: 211 IKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQNDE----K 266
K E+N EK + + K + + + + D ++K QN +
Sbjct: 366 -KTESNVTEEKSN---TMFPDDKTIEDESQDIKSRKTAESIPDGVGGDIKVQNGSVPTGE 421
Query: 267 REKLEDVSVDVSASKLYGTKNDGI-ESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHIS 325
E+ + + ++ + L T D + LN + +E + K E++ + ++
Sbjct: 422 VEQGKILPIEKNTESLEETAEDTEPQKGRKELNAVTISEIKDEHNLKTEKENDIGNEQRE 481
Query: 326 KNDEKREK-LDDALVFEVSVNKLCDSKNDGIHMH-AKNQLESAAADERSLETKDEDDKRG 383
+N+ K +DD++ +V++ K + I + ++++ E A+ + + +DED+ +
Sbjct: 482 ENELKVVPGIDDSVETGEAVSEETGEKEEEIRIDLSESENEKVTAENITEQREDEDEAQK 541
Query: 384 DKLNDGVADMELTLESEVKESKPE-VDVGYEVSKESSNLSFLFEPPVAEGDE-SGTEDEQ 441
+ + D + D + E +V + + E + G E KE ++ E +++GD+ T D+
Sbjct: 542 EAMKDVITDSVPSAEDKVSDEEKELIKHGIENIKEIGGIA---ETQISDGDKIPETSDKP 598
Query: 442 VAFAKEVENFYRERNLEFKHPKFYKEDLNLLKL 474
V ++E ++ +E +E K + E+ N+ K+
Sbjct: 599 VE-SQESQD--KEIKVEKKLAE--SENENICKI 626
>RGD|61991 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10116 "Rattus norvegicus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO;ISS] [GO:0000776 "kinetochore"
evidence=ISO;ISS] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IDA] [GO:0009314 "response to radiation"
evidence=ISO;ISS] [GO:0019827 "stem cell maintenance" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 125 (49.1 bits), Expect = 0.00070, P = 0.00070
Identities = 58/285 (20%), Positives = 123/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ + L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + + K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>UNIPROTKB|Q9Z1M9 [details] [associations]
symbol:Smc1a "Structural maintenance of chromosomes protein
1A" species:10116 "Rattus norvegicus" [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 125 (49.1 bits), Expect = 0.00070, P = 0.00070
Identities = 58/285 (20%), Positives = 123/285 (43%)
Query: 146 NQH--EHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRNDGSHVHPMNPECAA 203
N H +++AAE + K E E ++ + L D+ V +L ++ + +N E A+
Sbjct: 185 NYHRKKNIAAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELAS 244
Query: 204 VNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKAQN 263
N+ + K +K+ ++L + + + + + +RP +KA+
Sbjct: 245 KNKEIEKDKKRMDKVEDELKEKKKELGKMMR-EQQQIEKEIKEKDSELNQKRPQYIKAKE 303
Query: 264 D--EKREKLEDVSVDV-SASKLYGTKN---DGIESHVLTLNQL--EFAERSSDIKAKNEE 315
+ K +KLE + + K Y + D +E +L++ + EF ER +
Sbjct: 304 NTSHKIKKLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGR 363
Query: 316 KGEKSDDHISKNDEKREKLDD-ALVFEVSVNKLC-DSK--NDGIHMHAKNQLESAAADER 371
++ + K +E+ A + K D K D + + + ++E+ A ++
Sbjct: 364 DLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
Query: 372 SLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYEVSK 416
L +E+ KR +KL + + + +LE E K+ + E+ E++K
Sbjct: 424 KLREIEENQKRIEKLEEYITTSKQSLE-EQKKLEGELTEEVEMAK 467
>UNIPROTKB|F1PDC9 [details] [associations]
symbol:ARID3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 CTD:1820 OMA:NGIMYTG
InterPro:IPR023334 PROSITE:PS51486 EMBL:AAEX03012672
RefSeq:XP_855193.3 Ensembl:ENSCAFT00000031240 GeneID:612370
KEGG:cfa:612370 Uniprot:F1PDC9
Length = 605
Score = 118 (46.6 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 444 FAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQVGESFNP 502
F ++ +F ++R P K+ L+L L+ V + GG EV + KLWR++ + N
Sbjct: 262 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNL 321
Query: 503 PKTCTTVSWTFRIFYEKALLEYE--KHRMSN-GELPLHDGSLTEPSRIESQAAGSQAFGS 559
P + T+ ++T R Y K L YE K +SN EL S R +S A+
Sbjct: 322 PTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFAYSP 381
Query: 560 G 560
G
Sbjct: 382 G 382
Score = 50 (22.7 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 137 SDGSLVHPLNQHEHVAA-EERLTKIEA-ENGEKEEKLDDDSVVG 178
SDG L + E EE L + E E+ E+EE +D+ V+G
Sbjct: 135 SDGDLKPKWEEEEEEEELEEDLEEDEEDEDEEEEEDYEDEEVLG 178
>UNIPROTKB|Q96QF7 [details] [associations]
symbol:ACRC "Acidic repeat-containing protein" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
EMBL:AJ311392 EMBL:AK097433 EMBL:BC136259 IPI:IPI00289929
RefSeq:NP_443189.1 UniGene:Hs.135167 ProteinModelPortal:Q96QF7
IntAct:Q96QF7 STRING:Q96QF7 PhosphoSite:Q96QF7 DMDM:74732669
PRIDE:Q96QF7 Ensembl:ENST00000373695 Ensembl:ENST00000373696
GeneID:93953 KEGG:hsa:93953 UCSC:uc004eae.2 CTD:93953
GeneCards:GC0XP070797 HGNC:HGNC:15805 HPA:HPA023476 MIM:300369
neXtProt:NX_Q96QF7 PharmGKB:PA24453 eggNOG:NOG302054
HOGENOM:HOG000033791 HOVERGEN:HBG102033 InParanoid:Q96QF7
OMA:DVPDDNS OrthoDB:EOG473PRB GenomeRNAi:93953 NextBio:78222
Bgee:Q96QF7 CleanEx:HS_ACRC Genevestigator:Q96QF7
InterPro:IPR006640 Pfam:PF10263 SMART:SM00731 Uniprot:Q96QF7
Length = 691
Score = 122 (48.0 bits), Expect = 0.00073, P = 0.00073
Identities = 67/281 (23%), Positives = 107/281 (38%)
Query: 23 APDVNMSDGETNVDVKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQ 82
APD N D E D D +P+ N DD S DN D +D+N S +P D S D+
Sbjct: 168 APDDNSDDSEAPDDNSDDS-DVPDDNSDDSSDDNSDDSSDDNSDDS-DVPDDK--SDDSD 223
Query: 83 TADDVKVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIA-KENSSTKSDGSL 141
DD +++V + + AP D E SD S
Sbjct: 224 VPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSE 283
Query: 142 VHPLNQHEHVAAEERLTKIEAENGEK------EEKLDDDSV---------VGVSANELSG 186
+ + A+++ EA + + E+K DD V V V A +L
Sbjct: 284 ASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAEDLCN 343
Query: 187 TRNDGSHVHPMNPECAAVNESSSEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQ 246
S + AAV++ S A +GE L +K S + N +++
Sbjct: 344 EGQIASDEEELVEAAAAVSQHDSSDDAGEQDLGENL---------SKPPSDPEANPEVSE 394
Query: 247 LECATADERPSEVKAQNDEKREKLEDVSVDVSASKLYGTKN 287
+ T +E P+ V Q+ +++ K + + V+ + TKN
Sbjct: 395 RKLPT-EEEPAPVVEQSGKRKSKTKTI-VEPPRKRQTKTKN 433
>ZFIN|ZDB-GENE-050809-105 [details] [associations]
symbol:arid4a "AT rich interactive domain 4A
(RBP1-like)" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 ZFIN:ZDB-GENE-050809-105 GO:GO:0005634
GO:GO:0003677 SMART:SM00333 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR016197 InterPro:IPR012603 InterPro:IPR025995
Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160
GeneTree:ENSGT00510000046413 EMBL:CU076099 EMBL:FP102895
IPI:IPI00997065 Ensembl:ENSDART00000128291
Ensembl:ENSDART00000151847 Uniprot:F1QWQ1
Length = 1332
Score = 125 (49.1 bits), Expect = 0.00077, P = 0.00077
Identities = 55/211 (26%), Positives = 85/211 (40%)
Query: 325 SKNDEKREKLDDALVFEVSVNKLCDSKNDGI-HMHAKN-QLESAAADERSLETKDEDDK- 381
S ND+ K D LV DSK + K +++ + E SL E K
Sbjct: 198 SCNDDLTVKKDQCLV-----RSFADSKFHTVARKDVKEVNIDTLSKPEYSLRKGCEAAKL 252
Query: 382 --RGDKLNDG-VADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDESGTE 438
+ ++ D D+ LES + E + G E EP E D+
Sbjct: 253 FLQNRQIPDRWKVDLSEILESSSSDEDDEDEDGEGKEGEEEEK----EPEPEEPDDEPDP 308
Query: 439 DEQVAFAKEVENFYRERNLEFKHPKF--YKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQV 496
+E+ F +++ F +R P YK DLNL KL+R V GG D + S +W+Q+
Sbjct: 309 EERDHFLQQLYKFMEDRGTPINKPPVLGYK-DLNLFKLFRLVHIHGGCDNIESGSIWKQI 367
Query: 497 GESFNPPKTCTTVSWTFRIFYEKALLEYEKH 527
P + S+ + Y K L +E++
Sbjct: 368 YMDLGIPVLNSAASYNVKTAYRKYLYGFEEY 398
>DICTYBASE|DDB_G0294611 [details] [associations]
symbol:DDB_G0294611 "unknown" species:44689
"Dictyostelium discoideum" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0294611
EMBL:AAFI02000141 InterPro:IPR017859 PRINTS:PR01503
RefSeq:XP_001733029.1 PRIDE:B0G167 EnsemblProtists:DDB0233684
GeneID:8627160 KEGG:ddi:DDB_G0294611 OMA:GFEFNTW Uniprot:B0G167
Length = 611
Score = 121 (47.7 bits), Expect = 0.00079, P = 0.00079
Identities = 58/265 (21%), Positives = 113/265 (42%)
Query: 203 AVNESSSEIKAENNKMGEKL-DGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVKA 261
A+ S +E+K + + +K+ D ++S K S +T ++ + +DE SE +
Sbjct: 348 ALKLSLTELKEVDADLVKKIADEDKKSWSSGIKKS-KETQ--IDDGRYSDSDESSSEDEE 404
Query: 262 QNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKA-KNEEKGEKS 320
+E ++++ V +A+K K +S + A+ S+ KA + EEK EK
Sbjct: 405 SEEEPKKEVVKRVVKKAAAKPAPVKPAPKQSKKKAAAKKPKADEKSEEKADEKEEKEEKE 464
Query: 321 DDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETKDEDD 380
+ K +EK E+ ++ + D K + AK + A+E+ E K+E+
Sbjct: 465 EKEEEKEEEKEEEKEEEKEEKEEKETKADDKEEKEEKEAKADEKKEKAEEKKEEKKEEEK 524
Query: 381 KRGDKLNDGVADMELTLESEVKESKPEVDVGY-EVSKESSNLSFLFEPPVAEGDESGTED 439
K +K + + ++E K KP+ V + +KE+ + + + T
Sbjct: 525 KEEEKKEEEKKEESKADDAEEKVEKPKAKVSKGKNTKETKETTTATKTNGKRKEPESTAS 584
Query: 440 EQVAF-AKEVENFYRERNLEFKHPK 463
+ A KE ++ + K PK
Sbjct: 585 KPAAKNTKETKDTEESKEKATKKPK 609
>UNIPROTKB|F1M789 [details] [associations]
symbol:Myh13 "Protein Myh13" species:10116 "Rattus
norvegicus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016459 "myosin complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:3137 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 InterPro:IPR015650
PANTHER:PTHR13140:SF22 GeneTree:ENSGT00680000099790 IPI:IPI00767100
PRIDE:F1M789 Ensembl:ENSRNOT00000043412 ArrayExpress:F1M789
Uniprot:F1M789
Length = 1812
Score = 126 (49.4 bits), Expect = 0.00085, P = 0.00085
Identities = 71/326 (21%), Positives = 141/326 (43%)
Query: 153 AEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVNESSSEI 211
A+E L + EA E EEK+ S++ N+L +++ ++ C + +S ++
Sbjct: 737 AKEELARSEARRKELEEKMV--SLLQ-EKNDLQLQVQSETENLMDAEERCEGLIKSKIQL 793
Query: 212 KAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEVKAQNDE 265
+A+ ++ E+L+ + A + L S ++ LE + +N
Sbjct: 794 EAKVKELNERLEEEEETNSELVAKKRNLEDKCSSLKRDIDDLELTLTKVEKEKHATENKV 853
Query: 266 KREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHI- 324
K E +++ + SKL K E+H TL+ L+ E + K K E+ D +
Sbjct: 854 KNLSEEMTALEETISKLTKEKKSLQEAHQQTLDDLQVEEDKVNGLMKINVKLEQQTDDLE 913
Query: 325 -SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETK 376
S EK+ + D V ++S + D +ND + K L+ + L+T+
Sbjct: 914 GSLEQEKKLRADLERVKRKLEGDLKMSQESIMDLENDAQQLEEK--LKKKEFEMSQLQTR 971
Query: 377 DEDDK-RGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDE- 434
+D++ +L + +++ E +E + E V ++ K+ S+L+ E +E
Sbjct: 972 IDDEQILSLQLQKKIKELQARTEELEEEIEAEHTVRAKIEKQRSDLARELEEISERLEEA 1031
Query: 435 SGTEDEQVAFAKEVENFYRE--RNLE 458
SG Q+ K+ E +++ R+LE
Sbjct: 1032 SGATSAQIEMNKKREAEFQKLRRDLE 1057
>UNIPROTKB|F1M7Q6 [details] [associations]
symbol:Myh13 "Protein Myh13" species:10116 "Rattus
norvegicus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016459 "myosin complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:3137 GO:GO:0005524
GO:GO:0030016 GO:GO:0009267 GO:GO:0003774 GO:GO:0016459
InterPro:IPR015650 PANTHER:PTHR13140:SF22 IPI:IPI00763881
Ensembl:ENSRNOT00000055257 ArrayExpress:F1M7Q6 Uniprot:F1M7Q6
Length = 1813
Score = 126 (49.4 bits), Expect = 0.00085, P = 0.00085
Identities = 71/326 (21%), Positives = 141/326 (43%)
Query: 153 AEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVNESSSEI 211
A+E L + EA E EEK+ S++ N+L +++ ++ C + +S ++
Sbjct: 738 AKEELARSEARRKELEEKMV--SLLQ-EKNDLQLQVQSETENLMDAEERCEGLIKSKIQL 794
Query: 212 KAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEVKAQNDE 265
+A+ ++ E+L+ + A + L S ++ LE + +N
Sbjct: 795 EAKVKELNERLEEEEETNSELVAKKRNLEDKCSSLKRDIDDLELTLTKVEKEKHATENKV 854
Query: 266 KREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKSDDHI- 324
K E +++ + SKL K E+H TL+ L+ E + K K E+ D +
Sbjct: 855 KNLSEEMTALEETISKLTKEKKSLQEAHQQTLDDLQVEEDKVNGLMKINVKLEQQTDDLE 914
Query: 325 -SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADERSLETK 376
S EK+ + D V ++S + D +ND + K L+ + L+T+
Sbjct: 915 GSLEQEKKLRADLERVKRKLEGDLKMSQESIMDLENDAQQLEEK--LKKKEFEMSQLQTR 972
Query: 377 DEDDK-RGDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPVAEGDE- 434
+D++ +L + +++ E +E + E V ++ K+ S+L+ E +E
Sbjct: 973 IDDEQILSLQLQKKIKELQARTEELEEEIEAEHTVRAKIEKQRSDLARELEEISERLEEA 1032
Query: 435 SGTEDEQVAFAKEVENFYRE--RNLE 458
SG Q+ K+ E +++ R+LE
Sbjct: 1033 SGATSAQIEMNKKREAEFQKLRRDLE 1058
>CGD|CAL0004151 [details] [associations]
symbol:orf19.6694 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 CGD:CAL0004151 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 KO:K11321 EMBL:AACQ01000166 EMBL:AACQ01000167
RefSeq:XP_712122.1 RefSeq:XP_712147.1 RefSeq:XP_888968.1
ProteinModelPortal:Q59R26 GeneID:3646242 GeneID:3646259
GeneID:3704011 KEGG:cal:CaO19.13986 KEGG:cal:CaO19.6694
KEGG:cal:CaO19_6694 Uniprot:Q59R26
Length = 659
Score = 121 (47.7 bits), Expect = 0.00088, P = 0.00088
Identities = 74/311 (23%), Positives = 133/311 (42%)
Query: 128 IAKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGT 187
++++ S +S LV E V E++ +E+ +K E+ D + + ELS T
Sbjct: 228 VSEKPSPNESTSLLVTKEKSEEKVVDEDQT--MESSEDQKNEEQDLEE-----SKELSNT 280
Query: 188 RNDGSHV-HPMNPECAAVNES-SSEIKAENNK-MGEKLDGAAVFYASAKKLSGSKTNGSL 244
D + P P +E EI + ++ M ++ + + K S T S
Sbjct: 281 DTDKMDIDEPQKPIDDKTSEKVEEEINQDQDQEMSDEGEEESAGVEEQPKTLESTTEPS- 339
Query: 245 NQLECATADERPSEVKAQNDEKRE-KLEDVSVDVSASKLYGT--KND--GIESHVLTLNQ 299
E +E EV + ++ E LE+ D A K + +ND ES ++ ++
Sbjct: 340 -DEEKVAENENGVEVPSDESKQDEVALEEKQTDEEAEKPIESIEENDEKNKESVIIEEDK 398
Query: 300 LEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHA 359
E ++ + + + E+K E+ + ++ DE EK+++ E NK D+ H +
Sbjct: 399 EEEISKTKESEQEQEDKDEEREIGRTEQDESDEKVEETGKTEEETNKEEDA-----HQPS 453
Query: 360 KNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEV--DVGYEVSKE 417
+ ES + +E L K E D + + + E T EVK+S P++ D G + S E
Sbjct: 454 SPEEESPSIEEIPL--KHESDADIEAIPGSDSSKEAT--PEVKQS-PKISDDQGSQESPE 508
Query: 418 SSNLSFLFEPP 428
S+ PP
Sbjct: 509 KSHDDVPSPPP 519
>UNIPROTKB|Q59R26 [details] [associations]
symbol:CaO19.13986 "Potential chromatin-associated protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 CGD:CAL0004151 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 KO:K11321 EMBL:AACQ01000166 EMBL:AACQ01000167
RefSeq:XP_712122.1 RefSeq:XP_712147.1 RefSeq:XP_888968.1
ProteinModelPortal:Q59R26 GeneID:3646242 GeneID:3646259
GeneID:3704011 KEGG:cal:CaO19.13986 KEGG:cal:CaO19.6694
KEGG:cal:CaO19_6694 Uniprot:Q59R26
Length = 659
Score = 121 (47.7 bits), Expect = 0.00088, P = 0.00088
Identities = 74/311 (23%), Positives = 133/311 (42%)
Query: 128 IAKENSSTKSDGSLVHPLNQHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGT 187
++++ S +S LV E V E++ +E+ +K E+ D + + ELS T
Sbjct: 228 VSEKPSPNESTSLLVTKEKSEEKVVDEDQT--MESSEDQKNEEQDLEE-----SKELSNT 280
Query: 188 RNDGSHV-HPMNPECAAVNES-SSEIKAENNK-MGEKLDGAAVFYASAKKLSGSKTNGSL 244
D + P P +E EI + ++ M ++ + + K S T S
Sbjct: 281 DTDKMDIDEPQKPIDDKTSEKVEEEINQDQDQEMSDEGEEESAGVEEQPKTLESTTEPS- 339
Query: 245 NQLECATADERPSEVKAQNDEKRE-KLEDVSVDVSASKLYGT--KND--GIESHVLTLNQ 299
E +E EV + ++ E LE+ D A K + +ND ES ++ ++
Sbjct: 340 -DEEKVAENENGVEVPSDESKQDEVALEEKQTDEEAEKPIESIEENDEKNKESVIIEEDK 398
Query: 300 LEFAERSSDIKAKNEEKGEKSDDHISKNDEKREKLDDALVFEVSVNKLCDSKNDGIHMHA 359
E ++ + + + E+K E+ + ++ DE EK+++ E NK D+ H +
Sbjct: 399 EEEISKTKESEQEQEDKDEEREIGRTEQDESDEKVEETGKTEEETNKEEDA-----HQPS 453
Query: 360 KNQLESAAADERSLETKDEDDKRGDKLNDGVADMELTLESEVKESKPEV--DVGYEVSKE 417
+ ES + +E L K E D + + + E T EVK+S P++ D G + S E
Sbjct: 454 SPEEESPSIEEIPL--KHESDADIEAIPGSDSSKEAT--PEVKQS-PKISDDQGSQESPE 508
Query: 418 SSNLSFLFEPP 428
S+ PP
Sbjct: 509 KSHDDVPSPPP 519
>UNIPROTKB|F1N2G1 [details] [associations]
symbol:BOD1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR017956
SMART:SM00384 GO:GO:0003677 OMA:LKTSEHC InterPro:IPR026955
PANTHER:PTHR31532 GeneTree:ENSGT00530000063517 EMBL:DAAA02018686
IPI:IPI01004082 UniGene:Bt.53074 Ensembl:ENSBTAT00000033704
NextBio:20868557 ArrayExpress:F1N2G1 Uniprot:F1N2G1
Length = 2982
Score = 128 (50.1 bits), Expect = 0.00089, P = 0.00089
Identities = 82/340 (24%), Positives = 134/340 (39%)
Query: 148 HEHVAAEERLTKIEAENGEKEEKLDDDSVV------GVSANELSGTRNDGSHVHPMNPEC 201
HE +A ++EK D ++ G SAN S + + +N E
Sbjct: 154 HEFLATLSHKEDTSGSTAPEDEKPDSSTITQGVPAPGPSANVASDAMSILETITSLNQEA 213
Query: 202 AAVNESSSEIKAENN-KMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATADERPSEVK 260
+A S+ A+ + +M +K A SA+K +T+ E TAD +
Sbjct: 214 SAARASTETSNAKTSERMSKKTPSQASTDTSAEK---ERTSEDTADKEKPTADSAGEGQE 270
Query: 261 AQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEKS 320
A + E+L D K + ++ S VL LN+ + + SSD K+K+ +KGEK
Sbjct: 271 AA--PRSEELSDPPCPAEEMKNHAREST---SSVL-LNK-DAQQESSDQKSKSADKGEKK 323
Query: 321 DDHISKNDEKREKLD------DALVFEVSVNKLCDSKN--DGIHMHAKNQLESAAADERS 372
D K + K+EK + D V ++ D K D +K E + ++
Sbjct: 324 PDSNEKAERKKEKKEKTEKKTDHSKRSEDVQRVKDEKQAKDKEVECSKLPSEKTNSKAKT 383
Query: 373 LETKDEDDKRGDKLNDGVADMEL----TLE-SEVKESKPEVDVGYEVSKESSNLSFLFEP 427
E ED D DG+ D+ + T + S +E E V E +E S E
Sbjct: 384 SEGTKEDISMIDSDVDGLTDITVSSVHTSDLSSFEEDTEEEAVMSESMEEGEITSDDEEK 443
Query: 428 PVAEGDESGTEDEQVAFAKEVENFYRERNLEFKHPKFYKE 467
++ T D AK V + Y + + + K+Y +
Sbjct: 444 NKQNKTKTQTSDPSEGKAKNVRHAYVHK--PYLYSKYYSD 481
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 93 (37.8 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 41/129 (31%), Positives = 59/129 (45%)
Query: 301 EFAERSSDIK--AKNEEKGEK--SDDHISKNDEKREKLDDALVFEVSVN--KLCDSKNDG 354
E S+D K + EKGEK S D + +N EK E + V E S + K DS+
Sbjct: 1887 ESKSSSNDEKDVCEKVEKGEKEISSDKVDENKEKVENNEKVNVDEKSKDNEKSNDSEKSK 1946
Query: 355 IHMHAKNQLESAAADERSLET-KDEDDKRGDKLNDGVADMELTLESEVKESKPEVDVGYE 413
+ +K+ E + DE+S + K +DD++ D + LE ES P E
Sbjct: 1947 DNEKSKDD-EKSKDDEKSKDDEKSQDDEKSKDDEKSKDDEKSKLEENQDESTP-----ME 2000
Query: 414 VSKESSNLS 422
V KES + S
Sbjct: 2001 VDKESKSTS 2009
Score = 90 (36.7 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 60/323 (18%), Positives = 116/323 (35%)
Query: 27 NMSDGETNVDVKDPPFSIPEKNQDDMSSDNIDLQTDNNDVMSVGLPSDNNGSVDNQTADD 86
N ++GE D ++ E+ +++ + D+ +N V V + SD++ S + +AD+
Sbjct: 203 NDNEGENEEDEEEEE---EEEEEEEEEEEEEDIYIEN--VRDV-IKSDDDQSFGDSSADE 256
Query: 87 VKVNTNVDRLYGNHXXXXXXXXXXXXXXXXXXTGTNAPVDVIAKENSSTKSDGSLVHPLN 146
K N +V + N+ GT A S T+ H N
Sbjct: 257 KKPNNSVAKKAPNNTMTIKATRSTSRTRG----GTTAQSTPPPPPPSRTRGGKKAAHIKN 312
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELSGTRN-----DGSHVHPMNPEC 201
E + E + E E E+ + S +++ T S P P
Sbjct: 313 NIESEESSEEEEEEEEEEDEEVQASSSSSSSRRGVRQINATTAKKPPASKSKSQPSPPTS 372
Query: 202 AAVNESS-----SEIKAENNKMGEKLDGAAVFYASAKKLSGSKTNGSLNQLECATA---D 253
++N ++I++E+ + E D ++K K GS T D
Sbjct: 373 NSLNGKRRRTPLNKIESESEESDESSDEYETPITTSKSKVPIKKGGSKKAAASPTTTKLD 432
Query: 254 ERPSEVKAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKN 313
+ S + + + + + V+ S++ K G + + D +
Sbjct: 433 KSKSNISSSSSSSNSNNKKKQLGVTKSRV-PLKGKG------KIKNSSSEDEDDDDDDSD 485
Query: 314 EEKGEKSDDHISKNDEKREKLDD 336
E+ ++SDD S+N + + DD
Sbjct: 486 EQNFDESDDFASENSSEEQASDD 508
>MGI|MGI:1339711 [details] [associations]
symbol:Myh1 "myosin, heavy polypeptide 1, skeletal muscle,
adult" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005859 "muscle myosin
complex" evidence=ISO] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IDA] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0031672 "A band" evidence=IDA]
[GO:0032982 "myosin filament" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 MGI:MGI:1339711
GO:GO:0005524 GO:GO:0014704 GO:GO:0003774 eggNOG:COG5022
GO:GO:0031672 GO:GO:0005859 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 InterPro:IPR015650 PANTHER:PTHR13140:SF22
HOGENOM:HOG000173959 CTD:4619 GeneTree:ENSGT00680000099790
OMA:QPTEEIS EMBL:AL596129 EMBL:BC108329 IPI:IPI00380896
RefSeq:NP_109604.1 UniGene:Mm.477065 ProteinModelPortal:Q5SX40
SMR:Q5SX40 IntAct:Q5SX40 STRING:Q5SX40 PhosphoSite:Q5SX40
PaxDb:Q5SX40 PRIDE:Q5SX40 Ensembl:ENSMUST00000018637
Ensembl:ENSMUST00000075734 Ensembl:ENSMUST00000124516 GeneID:17879
KEGG:mmu:17879 UCSC:uc007jmd.2 InParanoid:Q32P18 NextBio:292673
Bgee:Q5SX40 Genevestigator:Q5SX40 GermOnline:ENSMUSG00000056328
Uniprot:Q5SX40
Length = 1942
Score = 126 (49.4 bits), Expect = 0.00092, P = 0.00092
Identities = 72/332 (21%), Positives = 143/332 (43%)
Query: 147 QHEHVAAEERLTKIEAENGEKEEKLDDDSVVGVSANELS-GTRNDGSHVHPMNPECAAVN 205
+ E A+E L K EA+ E EEK+ + N+L +++ + C +
Sbjct: 860 KEEFEKAKENLAKAEAKRKELEEKM---VALMQEKNDLQLQVQSEADSLADAEERCDQLI 916
Query: 206 ESSSEIKAENNKMGEKLDGA----AVFYASAKKLSG--SKTNGSLNQLECATADERPSEV 259
++ +++A+ ++ E+ + A A +KL S+ ++ LE A +
Sbjct: 917 KTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKH 976
Query: 260 KAQNDEKREKLEDVSVDVSASKLYGTKNDGIESHVLTLNQLEFAERSSDIKAKNEEKGEK 319
+N K E +D + +KL K E+H TL+ L+ E + K + K E+
Sbjct: 977 ATENKVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQ 1036
Query: 320 SDDHI--SKNDEKREKLDDALV-------FEVSVNKLCDSKNDGIHMHAKNQLESAAADE 370
D + S EK+ ++D +++ D +ND + K L+ +
Sbjct: 1037 QVDDLEGSLEQEKKIRMDLERAKRKLEGDLKLAQESTMDVENDKQQLDEK--LKKKEFEM 1094
Query: 371 RSLETKDEDDKR-GDKLNDGVADMELTLESEVKESKPEVDVGYEVSKESSNLSFLFEPPV 429
+L++K ED++ G +L + +++ +E +E + E + K+ S+LS E
Sbjct: 1095 SNLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEIS 1154
Query: 430 AEGDESG-TEDEQVAFAKEVENFYRE--RNLE 458
+E+G Q+ K+ E +++ R+LE
Sbjct: 1155 ERLEEAGGATSAQIEMNKKREAEFQKMRRDLE 1186
>UNIPROTKB|F1NAK8 [details] [associations]
symbol:LOC100858693 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
EMBL:AADN02068975 EMBL:AADN02068976 IPI:IPI00651600
Ensembl:ENSGALT00000009379 OMA:RQTFGTA Uniprot:F1NAK8
Length = 368
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 438 ED-EQVAFAKEVENFYRERNLEFKH-PKFYKEDLNLLKLWRAVIKLGGYDEVTSCKLWRQ 495
ED ++ F ++ +F ++R P K+ L+L L+R V GG EV + K+WR+
Sbjct: 88 EDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYTLYRLVTDKGGLVEVINKKIWRE 147
Query: 496 VGESFNPPKTCTTVSWTFRIFYEKALLEYE--KHRMSN-GEL 534
+ + N P + T+ + T R Y K L YE K +S+ GEL
Sbjct: 148 ITKGLNLPTSITSAALTVRTQYMKYLYPYECEKRALSSPGEL 189
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.128 0.360 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 738 697 0.00081 121 3 11 23 0.38 35
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 111
No. of states in DFA: 617 (66 KB)
Total size of DFA: 358 KB (2178 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 76.79u 0.10s 76.89t Elapsed: 00:00:03
Total cpu time: 76.82u 0.10s 76.92t Elapsed: 00:00:03
Start: Tue May 21 09:19:04 2013 End: Tue May 21 09:19:07 2013
WARNINGS ISSUED: 1