Query 004665
Match_columns 738
No_of_seqs 378 out of 2383
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 03:07:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004665.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004665hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02418 delta-1-pyrroline-5-c 100.0 9E-123 2E-127 1083.6 76.7 708 3-738 4-718 (718)
2 TIGR01092 P5CS delta l-pyrroli 100.0 3E-120 6E-125 1065.2 75.2 704 10-737 3-711 (715)
3 PRK00197 proA gamma-glutamyl p 100.0 8E-84 1.7E-88 718.0 43.1 408 313-721 3-416 (417)
4 cd07079 ALDH_F18-19_ProA-GPR G 100.0 1.6E-82 3.4E-87 705.4 40.9 398 318-716 2-405 (406)
5 KOG2450 Aldehyde dehydrogenase 100.0 1.9E-81 4.1E-86 674.1 32.2 399 292-719 42-498 (501)
6 KOG2451 Aldehyde dehydrogenase 100.0 5.4E-81 1.2E-85 640.4 33.0 399 290-717 43-499 (503)
7 COG1012 PutA NAD-dependent ald 100.0 2.7E-78 5.9E-83 679.2 42.1 396 291-717 19-469 (472)
8 PRK11241 gabD succinate-semial 100.0 5.2E-77 1.1E-81 673.9 43.5 397 291-716 31-481 (482)
9 TIGR00407 proA gamma-glutamyl 100.0 5.5E-77 1.2E-81 655.9 38.5 388 323-711 1-398 (398)
10 PLN02419 methylmalonate-semial 100.0 2E-76 4.3E-81 675.0 43.4 399 291-717 134-590 (604)
11 PLN02174 aldehyde dehydrogenas 100.0 2.8E-76 6E-81 663.3 43.4 386 313-717 9-445 (484)
12 TIGR03374 ABALDH 1-pyrroline d 100.0 2.7E-75 5.8E-80 659.4 43.1 398 290-715 20-471 (472)
13 PLN02315 aldehyde dehydrogenas 100.0 1.2E-74 2.6E-79 657.3 42.5 403 290-717 38-495 (508)
14 PLN02766 coniferyl-aldehyde de 100.0 2.1E-74 4.6E-79 656.0 42.6 399 290-717 40-495 (501)
15 PRK13968 putative succinate se 100.0 4.6E-74 1E-78 648.1 43.9 395 291-716 12-460 (462)
16 PRK09406 gabD1 succinic semial 100.0 7.1E-74 1.5E-78 645.8 44.1 398 291-715 6-456 (457)
17 cd07113 ALDH_PADH_NahF Escheri 100.0 6.4E-74 1.4E-78 650.8 43.4 400 291-716 20-476 (477)
18 PLN02278 succinic semialdehyde 100.0 8.5E-74 1.9E-78 651.2 44.4 399 289-716 43-495 (498)
19 PLN02466 aldehyde dehydrogenas 100.0 4.8E-74 1E-78 655.9 42.4 398 291-717 78-532 (538)
20 cd07130 ALDH_F7_AASADH NAD+-de 100.0 6.4E-74 1.4E-78 649.9 42.5 401 291-716 17-472 (474)
21 cd07559 ALDH_ACDHII_AcoD-like 100.0 1.1E-73 2.4E-78 648.4 42.6 398 290-716 20-479 (480)
22 cd07086 ALDH_F7_AASADH-like NA 100.0 1.5E-73 3.3E-78 647.8 43.6 401 291-716 18-476 (478)
23 cd07117 ALDH_StaphAldA1 Unchar 100.0 1.8E-73 3.9E-78 645.4 43.8 397 291-716 21-474 (475)
24 cd07140 ALDH_F1L_FTFDH 10-form 100.0 1.6E-73 3.6E-78 646.5 42.6 400 291-716 26-485 (486)
25 PRK13252 betaine aldehyde dehy 100.0 2.7E-73 5.8E-78 647.4 43.9 398 291-717 27-481 (488)
26 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 3.5E-73 7.5E-78 645.0 44.0 397 290-716 20-478 (479)
27 TIGR03216 OH_muco_semi_DH 2-hy 100.0 2.9E-73 6.2E-78 646.1 43.1 401 290-716 18-480 (481)
28 cd07142 ALDH_F2BC Arabidosis a 100.0 3E-73 6.6E-78 645.1 41.6 395 291-714 24-475 (476)
29 cd07107 ALDH_PhdK-like Nocardi 100.0 6E-73 1.3E-77 640.0 43.8 395 292-716 3-455 (456)
30 cd07148 ALDH_RL0313 Uncharacte 100.0 7.7E-73 1.7E-77 638.3 43.5 401 291-715 4-455 (455)
31 PTZ00381 aldehyde dehydrogenas 100.0 6.7E-73 1.5E-77 640.8 42.3 386 313-717 6-439 (493)
32 TIGR01780 SSADH succinate-semi 100.0 5.9E-73 1.3E-77 638.4 41.3 391 292-711 3-448 (448)
33 cd07106 ALDH_AldA-AAD23400 Str 100.0 1.5E-72 3.3E-77 635.3 43.9 392 292-714 3-445 (446)
34 cd07085 ALDH_F6_MMSDH Methylma 100.0 1.6E-72 3.5E-77 639.8 44.2 400 290-716 20-477 (478)
35 TIGR02299 HpaE 5-carboxymethyl 100.0 1.6E-72 3.4E-77 641.5 43.4 396 291-717 21-478 (488)
36 PRK13473 gamma-aminobutyraldeh 100.0 1.4E-72 3E-77 640.1 42.9 400 290-717 21-474 (475)
37 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 2E-72 4.4E-77 636.2 43.4 397 292-718 3-457 (457)
38 PLN02467 betaine aldehyde dehy 100.0 1.6E-72 3.4E-77 640.5 42.6 400 291-717 28-489 (503)
39 cd07151 ALDH_HBenzADH NADP+-de 100.0 3.7E-72 8E-77 634.7 44.6 397 291-716 15-464 (465)
40 cd07143 ALDH_AldA_AN0554 Asper 100.0 3.9E-72 8.5E-77 635.5 42.4 397 291-716 27-480 (481)
41 cd07152 ALDH_BenzADH NAD-depen 100.0 6.6E-72 1.4E-76 629.6 43.6 390 296-714 1-442 (443)
42 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 5.7E-72 1.2E-76 636.2 43.3 397 291-716 28-483 (484)
43 cd07110 ALDH_F10_BADH Arabidop 100.0 8.8E-72 1.9E-76 630.8 43.6 394 292-714 3-455 (456)
44 PLN02203 aldehyde dehydrogenas 100.0 1E-71 2.2E-76 628.6 43.9 387 313-718 5-445 (484)
45 PLN00412 NADP-dependent glycer 100.0 1.2E-71 2.6E-76 633.3 44.5 403 290-717 35-488 (496)
46 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 1E-71 2.2E-76 632.5 43.6 397 290-714 18-472 (473)
47 cd07147 ALDH_F21_RNP123 Aldehy 100.0 1E-71 2.3E-76 629.8 43.5 398 291-715 4-452 (452)
48 cd07145 ALDH_LactADH_F420-Bios 100.0 1.3E-71 2.9E-76 629.3 44.2 398 291-715 4-456 (456)
49 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 1.1E-71 2.4E-76 633.0 42.1 396 291-715 27-480 (481)
50 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 1.8E-71 4E-76 627.6 43.3 393 293-714 3-453 (454)
51 cd07115 ALDH_HMSADH_HapE Pseud 100.0 2.3E-71 4.9E-76 626.9 43.6 396 292-716 3-452 (453)
52 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 1.3E-71 2.8E-76 627.1 41.4 394 292-715 3-455 (455)
53 cd07109 ALDH_AAS00426 Uncharac 100.0 1.7E-71 3.8E-76 628.0 42.6 393 292-714 3-453 (454)
54 cd07150 ALDH_VaniDH_like Pseud 100.0 2.1E-71 4.6E-76 627.3 43.3 396 291-715 4-451 (451)
55 cd07094 ALDH_F21_LactADH-like 100.0 3.1E-71 6.7E-76 626.1 44.5 397 291-714 4-452 (453)
56 TIGR01804 BADH glycine betaine 100.0 1.4E-71 3.1E-76 630.6 41.3 392 291-711 18-467 (467)
57 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 6.6E-71 1.4E-75 630.4 46.1 428 260-716 12-511 (512)
58 cd07089 ALDH_CddD-AldA-like Rh 100.0 4E-71 8.8E-76 624.9 43.1 398 292-715 3-459 (459)
59 cd07119 ALDH_BADH-GbsA Bacillu 100.0 3.7E-71 8E-76 629.6 42.6 397 291-717 18-474 (482)
60 cd07118 ALDH_SNDH Gluconobacte 100.0 3.4E-71 7.3E-76 624.8 41.1 393 293-714 4-453 (454)
61 TIGR01237 D1pyr5carbox2 delta- 100.0 9.7E-71 2.1E-75 628.5 45.0 398 291-716 51-510 (511)
62 cd07091 ALDH_F1-2_Ald2-like AL 100.0 4E-71 8.7E-76 628.4 41.3 397 290-715 23-476 (476)
63 TIGR03250 PhnAcAld_DH putative 100.0 1E-70 2.2E-75 623.0 43.9 396 292-716 23-471 (472)
64 PRK09847 gamma-glutamyl-gamma- 100.0 4.9E-71 1.1E-75 628.0 41.5 397 291-716 40-492 (494)
65 cd07083 ALDH_P5CDH ALDH subfam 100.0 1.5E-70 3.2E-75 625.8 45.5 399 290-715 36-498 (500)
66 cd07123 ALDH_F4-17_P5CDH Delta 100.0 8.6E-71 1.9E-75 629.4 43.1 400 289-716 49-519 (522)
67 cd07098 ALDH_F15-22 Aldehyde d 100.0 1.3E-70 2.7E-75 622.8 43.7 403 292-716 2-464 (465)
68 cd07125 ALDH_PutA-P5CDH Delta( 100.0 1.9E-70 4.2E-75 627.0 45.6 424 266-718 19-509 (518)
69 cd07108 ALDH_MGR_2402 Magnetos 100.0 8.1E-71 1.8E-75 623.1 41.9 394 292-714 3-456 (457)
70 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 8.8E-71 1.9E-75 617.4 41.6 374 316-714 1-428 (429)
71 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 1.1E-70 2.5E-75 623.1 42.8 391 291-714 19-465 (466)
72 cd07136 ALDH_YwdH-P39616 Bacil 100.0 8.3E-71 1.8E-75 617.0 41.2 380 318-718 2-429 (449)
73 TIGR01236 D1pyr5carbox1 delta- 100.0 1E-70 2.2E-75 628.5 42.7 400 290-717 50-521 (533)
74 cd07088 ALDH_LactADH-AldA Esch 100.0 1.6E-70 3.5E-75 622.8 43.6 395 291-714 18-467 (468)
75 cd07102 ALDH_EDX86601 Uncharac 100.0 1.6E-70 3.5E-75 620.4 43.4 395 292-714 2-451 (452)
76 PRK03137 1-pyrroline-5-carboxy 100.0 2.9E-70 6.2E-75 625.0 45.9 398 289-715 53-512 (514)
77 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 1.9E-70 4.1E-75 623.4 44.0 398 291-716 19-476 (478)
78 PRK09457 astD succinylglutamic 100.0 1.6E-70 3.5E-75 623.6 43.3 397 290-717 19-471 (487)
79 PRK09407 gabD2 succinic semial 100.0 3.8E-70 8.3E-75 624.9 43.7 397 293-718 39-493 (524)
80 cd07092 ALDH_ABALDH-YdcW Esche 100.0 4.2E-70 9.1E-75 616.6 43.4 395 292-714 3-449 (450)
81 TIGR03240 arg_catab_astD succi 100.0 4.4E-70 9.6E-75 620.0 43.3 396 291-717 18-469 (484)
82 cd07099 ALDH_DDALDH Methylomon 100.0 5.2E-70 1.1E-74 616.4 43.5 395 292-714 2-452 (453)
83 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 3E-70 6.4E-75 620.8 41.3 394 291-714 19-470 (471)
84 cd07112 ALDH_GABALDH-PuuC Esch 100.0 3.8E-70 8.3E-75 617.5 41.7 394 292-714 8-461 (462)
85 TIGR01722 MMSDH methylmalonic 100.0 9.6E-70 2.1E-74 616.5 44.0 399 290-716 20-476 (477)
86 cd07111 ALDH_F16 Aldehyde dehy 100.0 3.6E-70 7.8E-75 618.3 40.2 385 290-712 41-477 (480)
87 cd07135 ALDH_F14-YMR110C Sacch 100.0 5E-70 1.1E-74 610.6 40.6 383 313-714 4-435 (436)
88 cd07137 ALDH_F3FHI Plant aldeh 100.0 5.7E-70 1.2E-74 609.5 40.9 375 318-715 3-432 (432)
89 cd07105 ALDH_SaliADH Salicylal 100.0 7.9E-70 1.7E-74 610.6 41.3 378 315-715 1-432 (432)
90 cd07132 ALDH_F3AB Aldehyde deh 100.0 1.1E-69 2.4E-74 609.5 41.8 381 318-718 2-429 (443)
91 PF00171 Aldedh: Aldehyde dehy 100.0 2.3E-70 5.1E-75 620.2 36.4 393 291-713 12-462 (462)
92 cd07114 ALDH_DhaS Uncharacteri 100.0 1.3E-69 2.8E-74 613.3 40.9 395 292-715 3-457 (457)
93 cd07133 ALDH_CALDH_CalB Conife 100.0 1.6E-69 3.5E-74 607.0 41.1 376 319-714 3-433 (434)
94 cd07121 ALDH_EutE Ethanolamine 100.0 4.3E-70 9.2E-75 608.5 36.0 371 314-715 4-422 (429)
95 cd07146 ALDH_PhpJ Streptomyces 100.0 3.7E-69 8E-74 607.3 43.7 395 291-714 4-450 (451)
96 cd07149 ALDH_y4uC Uncharacteri 100.0 6.6E-69 1.4E-73 607.7 44.5 397 291-714 4-452 (453)
97 cd07095 ALDH_SGSD_AstD N-succi 100.0 3.7E-69 8E-74 603.6 39.5 374 315-713 1-429 (431)
98 cd07126 ALDH_F12_P5CDH Delta(1 100.0 6.3E-69 1.4E-73 605.2 41.4 379 291-693 17-470 (489)
99 cd07093 ALDH_F8_HMSADH Human a 100.0 1.1E-68 2.4E-73 605.9 43.2 395 292-715 3-455 (455)
100 TIGR01238 D1pyr5carbox3 delta- 100.0 6.4E-69 1.4E-73 609.9 40.9 408 266-712 24-500 (500)
101 PRK15398 aldehyde dehydrogenas 100.0 2.7E-69 5.9E-74 606.7 37.2 377 313-717 35-454 (465)
102 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 1.4E-68 3.1E-73 604.5 43.0 394 292-714 3-450 (451)
103 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 1.5E-68 3.4E-73 607.0 43.4 399 290-715 20-472 (473)
104 KOG2456 Aldehyde dehydrogenase 100.0 1.3E-69 2.9E-74 561.8 30.4 383 315-717 3-433 (477)
105 cd07104 ALDH_BenzADH-like ALDH 100.0 2.3E-68 4.9E-73 599.6 42.0 377 315-714 1-430 (431)
106 TIGR02278 PaaN-DH phenylacetic 100.0 1.7E-68 3.6E-73 622.6 42.1 396 290-716 19-496 (663)
107 cd07128 ALDH_MaoC-N N-terminal 100.0 2.4E-68 5.2E-73 605.1 41.5 391 291-714 20-502 (513)
108 PRK11903 aldehyde dehydrogenas 100.0 1.3E-67 2.8E-72 600.9 40.0 394 291-714 24-505 (521)
109 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 1.3E-67 2.8E-72 588.5 39.0 381 316-715 1-438 (439)
110 PRK11904 bifunctional proline 100.0 4.4E-67 9.5E-72 630.7 46.0 428 263-717 536-1027(1038)
111 cd07087 ALDH_F3-13-14_CALDH-li 100.0 3.5E-67 7.6E-72 587.5 40.8 378 318-714 2-425 (426)
112 PRK10090 aldehyde dehydrogenas 100.0 1.7E-67 3.6E-72 584.7 37.5 353 342-717 1-408 (409)
113 cd07134 ALDH_AlkH-like Pseudom 100.0 4.2E-67 9E-72 587.4 40.7 378 318-714 2-432 (433)
114 PRK11563 bifunctional aldehyde 100.0 4.6E-67 1E-71 614.3 40.9 394 291-715 24-507 (675)
115 TIGR02518 EutH_ACDH acetaldehy 100.0 2.4E-66 5.3E-71 586.0 42.1 381 313-719 7-447 (488)
116 cd07129 ALDH_KGSADH Alpha-Keto 100.0 2.2E-66 4.8E-71 584.8 38.9 380 316-710 1-449 (454)
117 cd07077 ALDH-like NAD(P)+-depe 100.0 1.1E-65 2.4E-70 570.6 41.1 381 322-714 2-396 (397)
118 cd07122 ALDH_F20_ACDH Coenzyme 100.0 8.2E-66 1.8E-70 572.9 36.2 376 316-715 1-435 (436)
119 PRK11809 putA trifunctional tr 100.0 2.6E-65 5.5E-70 619.8 40.0 385 289-712 662-1111(1318)
120 cd07084 ALDH_KGSADH-like ALDH 100.0 6.8E-65 1.5E-69 570.5 39.6 375 317-713 2-440 (442)
121 PRK11905 bifunctional proline 100.0 1.4E-64 3E-69 615.4 42.9 388 290-716 571-1018(1208)
122 TIGR02288 PaaN_2 phenylacetic 100.0 4.5E-64 9.8E-69 569.7 40.3 364 292-677 71-516 (551)
123 PRK13805 bifunctional acetalde 100.0 1.7E-63 3.8E-68 599.6 39.9 385 313-720 11-454 (862)
124 KOG2454 Betaine aldehyde dehyd 100.0 5.4E-62 1.2E-66 499.2 24.3 403 293-716 71-531 (583)
125 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 3E-60 6.5E-65 539.7 40.6 391 314-715 84-545 (549)
126 cd07078 ALDH NAD(P)+ dependent 100.0 5.6E-60 1.2E-64 531.9 41.5 375 317-714 1-431 (432)
127 cd06534 ALDH-SF NAD(P)+-depend 100.0 2.3E-58 5.1E-63 508.0 39.0 355 322-714 2-366 (367)
128 COG0014 ProA Gamma-glutamyl ph 100.0 3.9E-57 8.5E-62 473.4 33.2 408 314-722 3-417 (417)
129 KOG2452 Formyltetrahydrofolate 100.0 1.9E-55 4.2E-60 459.3 25.5 364 313-716 458-880 (881)
130 COG4230 Delta 1-pyrroline-5-ca 100.0 4.2E-53 9.1E-58 451.4 27.0 386 288-713 129-575 (769)
131 KOG4165 Gamma-glutamyl phospha 100.0 1.9E-48 4E-53 393.4 32.2 422 316-737 2-429 (433)
132 KOG2453 Aldehyde dehydrogenase 100.0 1.1E-49 2.3E-54 402.2 15.7 395 313-726 54-503 (507)
133 KOG2455 Delta-1-pyrroline-5-ca 100.0 9.2E-44 2E-48 371.0 23.6 388 299-713 87-544 (561)
134 COG0263 ProB Glutamate 5-kinas 100.0 1.6E-42 3.6E-47 359.3 24.2 256 11-306 3-260 (369)
135 KOG1154 Gamma-glutamyl kinase 100.0 8.3E-43 1.8E-47 338.9 19.8 273 7-306 2-276 (285)
136 cd04256 AAK_P5CS_ProBA AAK_P5C 100.0 5E-41 1.1E-45 353.8 23.6 269 11-303 5-283 (284)
137 PRK12314 gamma-glutamyl kinase 100.0 2.4E-39 5.2E-44 339.0 24.4 257 10-306 5-265 (266)
138 PRK13402 gamma-glutamyl kinase 100.0 4.8E-39 1E-43 348.6 23.5 252 13-306 4-258 (368)
139 PRK05429 gamma-glutamyl kinase 100.0 5.6E-38 1.2E-42 343.3 23.8 257 9-306 3-262 (372)
140 PTZ00489 glutamate 5-kinase; P 100.0 1.1E-37 2.4E-42 324.1 23.7 252 9-306 3-260 (264)
141 cd04242 AAK_G5K_ProB AAK_G5K_P 100.0 1.3E-37 2.7E-42 324.5 23.7 247 16-303 1-250 (251)
142 TIGR01027 proB glutamate 5-kin 100.0 1.5E-37 3.2E-42 338.6 23.8 252 15-306 1-254 (363)
143 COG0548 ArgB Acetylglutamate k 100.0 3.4E-32 7.3E-37 278.0 22.1 244 13-304 1-264 (265)
144 TIGR00746 arcC carbamate kinas 100.0 4.8E-31 1E-35 279.3 23.3 243 15-304 1-309 (310)
145 cd04241 AAK_FomA-like AAK_FomA 100.0 5.5E-31 1.2E-35 275.2 22.2 244 16-303 1-252 (252)
146 PRK12353 putative amino acid k 100.0 1.4E-30 3.1E-35 277.9 23.8 257 13-304 1-313 (314)
147 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 4.1E-30 8.9E-35 287.0 27.6 319 315-669 25-391 (422)
148 COG1608 Predicted archaeal kin 100.0 3.5E-30 7.6E-35 254.5 18.8 244 17-304 3-251 (252)
149 CHL00202 argB acetylglutamate 100.0 2.3E-29 5E-34 266.4 22.5 242 13-304 22-283 (284)
150 PLN02512 acetylglutamate kinas 100.0 7.6E-29 1.6E-33 265.1 23.5 242 13-304 46-308 (309)
151 cd04237 AAK_NAGS-ABP AAK_NAGS- 100.0 1.6E-28 3.6E-33 259.2 21.0 239 14-303 18-280 (280)
152 PRK00942 acetylglutamate kinas 100.0 2.5E-28 5.5E-33 259.2 20.9 242 13-305 22-282 (283)
153 cd04250 AAK_NAGK-C AAK_NAGK-C: 100.0 5.6E-28 1.2E-32 255.9 21.1 241 13-303 13-279 (279)
154 PRK14058 acetylglutamate/acety 100.0 6.8E-28 1.5E-32 253.5 19.5 234 16-305 1-267 (268)
155 cd02115 AAK Amino Acid Kinases 100.0 3.4E-28 7.4E-33 253.5 16.1 238 18-303 1-248 (248)
156 cd04239 AAK_UMPK-like AAK_UMPK 100.0 2E-27 4.3E-32 244.7 20.8 227 16-303 1-228 (229)
157 PRK05279 N-acetylglutamate syn 100.0 1.5E-27 3.3E-32 268.7 21.0 242 13-306 24-292 (441)
158 PRK14558 pyrH uridylate kinase 100.0 4.3E-27 9.2E-32 242.5 22.0 222 15-305 1-230 (231)
159 PRK12686 carbamate kinase; Rev 100.0 5E-27 1.1E-31 247.2 22.7 255 13-304 1-311 (312)
160 PRK12352 putative carbamate ki 100.0 8.5E-27 1.8E-31 247.3 24.1 257 14-305 2-315 (316)
161 PRK00358 pyrH uridylate kinase 100.0 5.8E-27 1.3E-31 241.7 22.1 228 15-303 1-230 (231)
162 TIGR01890 N-Ac-Glu-synth amino 99.9 9E-27 2E-31 261.2 23.5 242 13-306 16-280 (429)
163 PRK12454 carbamate kinase-like 99.9 5E-26 1.1E-30 239.1 24.4 255 14-304 2-312 (313)
164 cd04249 AAK_NAGK-NC AAK_NAGK-N 99.9 1.1E-26 2.3E-31 242.7 18.6 234 17-303 1-252 (252)
165 cd04235 AAK_CK AAK_CK: Carbama 99.9 6.1E-26 1.3E-30 239.0 22.8 250 16-303 1-307 (308)
166 cd04255 AAK_UMPK-MosAB AAK_UMP 99.9 4.4E-26 9.6E-31 237.5 21.5 229 15-304 31-262 (262)
167 cd04238 AAK_NAGK-like AAK_NAGK 99.9 1.6E-26 3.4E-31 242.1 18.0 235 17-303 1-256 (256)
168 cd04254 AAK_UMPK-PyrH-Ec UMP k 99.9 8.3E-26 1.8E-30 232.8 21.5 228 15-304 1-231 (231)
169 TIGR02075 pyrH_bact uridylate 99.9 2E-25 4.3E-30 230.2 23.7 229 14-304 1-233 (233)
170 cd04246 AAK_AK-DapG-like AAK_A 99.9 4.6E-26 9.9E-31 236.2 19.0 225 16-288 1-233 (239)
171 PRK14556 pyrH uridylate kinase 99.9 2.5E-25 5.4E-30 227.3 23.6 235 10-305 11-248 (249)
172 cd04251 AAK_NAGK-UC AAK_NAGK-U 99.9 2.6E-26 5.7E-31 239.9 16.2 221 17-302 1-256 (257)
173 TIGR00761 argB acetylglutamate 99.9 4.8E-26 1E-30 234.9 18.0 214 16-281 1-231 (231)
174 cd04261 AAK_AKii-LysC-BS AAK_A 99.9 6.2E-26 1.3E-30 235.1 18.6 220 16-288 1-233 (239)
175 cd04252 AAK_NAGK-fArgBP AAK_NA 99.9 1.2E-25 2.5E-30 233.9 20.2 227 18-303 2-248 (248)
176 cd04236 AAK_NAGS-Urea AAK_NAGS 99.9 5.6E-26 1.2E-30 236.4 16.8 220 14-303 35-271 (271)
177 COG0528 PyrH Uridylate kinase 99.9 4.2E-25 9E-30 219.1 21.2 231 12-304 3-237 (238)
178 PF00696 AA_kinase: Amino acid 99.9 7E-26 1.5E-30 235.2 16.3 232 15-283 1-242 (242)
179 cd04234 AAK_AK AAK_AK: Amino A 99.9 1.7E-25 3.7E-30 229.9 17.1 207 16-288 1-220 (227)
180 PRK12354 carbamate kinase; Rev 99.9 6.4E-25 1.4E-29 230.2 20.6 246 15-306 1-301 (307)
181 cd04260 AAK_AKi-DapG-BS AAK_AK 99.9 5.5E-25 1.2E-29 228.5 19.5 218 17-287 2-237 (244)
182 PRK14557 pyrH uridylate kinase 99.9 3.5E-24 7.7E-29 221.3 24.4 234 12-307 2-240 (247)
183 TIGR02076 pyrH_arch uridylate 99.9 3.2E-24 6.9E-29 219.8 20.0 218 17-303 1-220 (221)
184 PLN02825 amino-acid N-acetyltr 99.9 3.5E-24 7.5E-29 240.6 21.6 246 13-306 16-365 (515)
185 cd04253 AAK_UMPK-PyrH-Pf AAK_U 99.9 4.8E-24 1E-28 218.3 19.7 217 16-303 1-220 (221)
186 PRK08841 aspartate kinase; Val 99.9 9.6E-24 2.1E-28 232.4 21.7 225 15-287 2-234 (392)
187 PRK09411 carbamate kinase; Rev 99.9 2.3E-23 5.1E-28 216.5 22.0 240 15-304 2-296 (297)
188 TIGR00656 asp_kin_monofn aspar 99.9 9.8E-24 2.1E-28 235.2 20.2 235 15-306 1-244 (401)
189 PRK06635 aspartate kinase; Rev 99.9 2.4E-23 5.1E-28 232.4 19.3 235 14-306 1-243 (404)
190 PRK04531 acetylglutamate kinas 99.9 6.2E-23 1.3E-27 225.2 20.4 208 14-306 36-250 (398)
191 PRK08210 aspartate kinase I; R 99.9 5.2E-23 1.1E-27 229.3 19.9 234 15-306 2-248 (403)
192 COG0549 ArcC Carbamate kinase 99.9 1.9E-21 4.1E-26 196.4 22.3 254 15-304 1-311 (312)
193 PRK07431 aspartate kinase; Pro 99.9 5.8E-22 1.2E-26 230.9 21.5 236 15-306 2-245 (587)
194 COG0527 LysC Aspartokinases [A 99.9 9.7E-21 2.1E-25 210.3 19.3 241 16-306 3-290 (447)
195 PRK08373 aspartate kinase; Val 99.8 5.9E-20 1.3E-24 197.4 20.4 229 13-287 2-271 (341)
196 TIGR00657 asp_kinases aspartat 99.8 2E-20 4.4E-25 210.8 17.6 243 15-306 1-284 (441)
197 cd04244 AAK_AK-LysC-like AAK_A 99.8 8.2E-20 1.8E-24 194.4 18.7 232 16-288 1-291 (298)
198 TIGR02078 AspKin_pair Pyrococc 99.8 1.3E-19 2.8E-24 193.7 13.8 239 16-310 1-275 (327)
199 PRK06291 aspartate kinase; Pro 99.8 6.6E-19 1.4E-23 199.3 19.6 242 16-306 2-304 (465)
200 cd04259 AAK_AK-DapDC AAK_AK-Da 99.8 8.8E-19 1.9E-23 185.7 18.2 233 16-288 1-288 (295)
201 cd04257 AAK_AK-HSDH AAK_AK-HSD 99.8 1.4E-18 2.9E-23 184.4 18.4 231 17-288 2-287 (294)
202 cd04245 AAK_AKiii-YclM-BS AAK_ 99.8 4.1E-18 9E-23 179.7 19.5 161 93-288 113-281 (288)
203 cd04243 AAK_AK-HSDH-like AAK_A 99.8 2E-18 4.3E-23 183.0 16.6 230 17-288 2-286 (293)
204 cd04240 AAK_UC AAK_UC: Unchara 99.8 1.2E-18 2.7E-23 175.5 13.9 202 18-303 1-203 (203)
205 PRK09084 aspartate kinase III; 99.8 5.5E-18 1.2E-22 190.5 16.0 238 16-306 1-290 (448)
206 cd04258 AAK_AKiii-LysC-EC AAK_ 99.7 3.6E-17 7.7E-22 172.9 17.8 229 16-288 1-285 (292)
207 PRK05925 aspartate kinase; Pro 99.7 9E-17 1.9E-21 179.3 17.4 239 15-306 2-281 (440)
208 cd04247 AAK_AK-Hom3 AAK_AK-Hom 99.7 1.1E-16 2.3E-21 170.1 16.7 169 94-305 127-305 (306)
209 PRK09034 aspartate kinase; Rev 99.7 1.5E-16 3.2E-21 179.4 19.0 171 93-306 113-290 (454)
210 PLN02551 aspartokinase 99.7 1.8E-16 3.9E-21 180.0 18.5 244 13-306 50-349 (521)
211 PRK09436 thrA bifunctional asp 99.7 1.1E-15 2.4E-20 183.1 17.5 240 17-306 2-298 (819)
212 PRK09466 metL bifunctional asp 99.7 1.6E-15 3.5E-20 180.4 18.2 245 10-305 6-300 (810)
213 PRK08961 bifunctional aspartat 99.7 8.6E-16 1.9E-20 185.9 16.2 235 14-288 7-297 (861)
214 COG2054 Uncharacterized archae 99.6 2.3E-14 5E-19 135.7 11.6 121 144-305 89-210 (212)
215 PF05893 LuxC: Acyl-CoA reduct 99.4 7.7E-10 1.7E-14 122.8 32.1 244 419-667 81-368 (399)
216 KOG0456 Aspartate kinase [Amin 99.3 1.6E-11 3.5E-16 128.4 12.7 171 94-306 194-376 (559)
217 cd04248 AAK_AK-Ectoine AAK_AK- 99.3 2.6E-11 5.7E-16 127.4 13.8 156 94-288 135-297 (304)
218 PRK09181 aspartate kinase; Val 99.3 3.7E-11 8.1E-16 135.5 14.7 166 93-306 140-312 (475)
219 KOG2436 Acetylglutamate kinase 98.8 2.1E-08 4.5E-13 109.6 9.9 243 13-306 94-360 (520)
220 KOG2449 Methylmalonate semiald 98.8 3.3E-09 7.1E-14 96.4 2.5 68 609-676 76-143 (157)
221 PF07368 DUF1487: Protein of u 98.4 2.2E-06 4.7E-11 85.5 11.9 134 538-676 8-171 (215)
222 PRK11905 bifunctional proline 97.8 6.9E-05 1.5E-09 93.7 10.2 102 415-533 1068-1175(1208)
223 PF00815 Histidinol_dh: Histid 96.7 0.65 1.4E-05 51.6 24.8 281 385-715 68-378 (412)
224 cd06572 Histidinol_dh Histidin 95.7 4.3 9.3E-05 45.0 25.2 249 386-675 56-325 (390)
225 PRK00877 hisD bifunctional his 95.3 6.2 0.00013 44.2 25.4 279 386-714 84-391 (425)
226 PLN02926 histidinol dehydrogen 95.2 6.6 0.00014 44.0 25.2 248 386-675 83-355 (431)
227 PRK13770 histidinol dehydrogen 94.9 8.1 0.00018 43.1 25.7 244 386-675 76-342 (416)
228 PRK12447 histidinol dehydrogen 94.7 9.3 0.0002 42.8 23.9 249 386-675 77-347 (426)
229 TIGR00069 hisD histidinol dehy 94.6 5.2 0.00011 44.2 20.9 245 386-675 52-321 (393)
230 COG0141 HisD Histidinol dehydr 93.7 7.1 0.00015 43.4 19.6 252 386-676 80-349 (425)
231 PRK13769 histidinol dehydrogen 92.9 17 0.00037 39.9 26.5 235 386-675 58-303 (368)
232 PRK11809 putA trifunctional tr 79.8 4.2 9.1E-05 52.1 7.6 92 416-523 1178-1269(1318)
233 PF03437 BtpA: BtpA family; I 61.3 25 0.00054 36.9 7.1 117 197-324 123-253 (254)
234 COG1778 Low specificity phosph 52.8 21 0.00045 34.5 4.3 58 217-293 11-68 (170)
235 PF13376 OmdA: Bacteriocin-pro 40.1 39 0.00084 27.2 3.6 34 313-346 7-40 (63)
236 COG0279 GmhA Phosphoheptose is 37.9 3E+02 0.0066 27.0 9.7 114 35-153 24-141 (176)
237 COG0434 SgcQ Predicted TIM-bar 36.4 87 0.0019 32.4 6.1 50 276-325 205-259 (263)
238 TIGR01689 EcbF-BcbF capsule bi 35.8 61 0.0013 30.2 4.6 47 15-62 2-49 (126)
239 cd01390 HMGB-UBF_HMG-box HMGB- 34.8 92 0.002 24.6 5.1 35 321-355 30-64 (66)
240 PF06945 DUF1289: Protein of u 34.0 43 0.00093 25.9 2.8 22 329-350 29-50 (51)
241 PF13714 PEP_mutase: Phosphoen 33.0 48 0.001 34.4 3.8 183 448-673 4-198 (238)
242 PF09011 HMG_box_2: HMG-box do 32.7 1.1E+02 0.0024 25.1 5.4 35 321-355 34-68 (73)
243 PF00505 HMG_box: HMG (high mo 32.5 1E+02 0.0022 24.6 5.0 36 322-357 31-66 (69)
244 PF10686 DUF2493: Protein of u 31.6 89 0.0019 26.0 4.5 39 16-63 4-42 (71)
245 smart00398 HMG high mobility g 28.7 1.5E+02 0.0033 23.4 5.5 34 323-356 33-66 (70)
246 TIGR02726 phenyl_P_delta pheny 28.1 1.3E+02 0.0029 29.4 5.8 58 216-294 9-68 (169)
247 cd01388 SOX-TCF_HMG-box SOX-TC 24.4 1.7E+02 0.0038 23.9 5.1 34 322-355 32-65 (72)
248 TIGR01684 viral_ppase viral ph 22.9 1.6E+02 0.0036 31.6 5.7 49 13-64 125-174 (301)
249 PF02590 SPOUT_MTase: Predicte 22.2 3.2E+02 0.0069 26.4 7.1 43 16-68 70-113 (155)
250 TIGR00246 tRNA_RlmH_YbeA rRNA 22.1 3.7E+02 0.0079 25.9 7.5 43 16-68 68-110 (153)
251 cd00084 HMG-box High Mobility 21.9 2.4E+02 0.0053 21.9 5.4 33 322-354 31-63 (66)
252 PRK10513 sugar phosphate phosp 20.1 1.6E+02 0.0035 30.6 5.1 42 14-60 3-44 (270)
No 1
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=8.7e-123 Score=1083.62 Aligned_cols=708 Identities=84% Similarity=1.228 Sum_probs=612.8
Q ss_pred cchhhHHhhccCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCccc
Q 004665 3 STDSSRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD 82 (738)
Q Consensus 3 ~~~~~~~~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~ 82 (738)
.-+..|..+++++++||||||+++++.+++++.+++.+++++|++|++.|+++|||.+|+..+|...+++.......+.+
T Consensus 4 ~~~~~~~~~~~~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSga~~~g~~~l~~~~~~~~~~~~ 83 (718)
T PLN02418 4 EEDRSRAFLRDVKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSGAVGVGRQRLRYRRLVNSSFAD 83 (718)
T ss_pred cccchhhHHhhCCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecchHHHHHHHHhhhhhhhccccc
Confidence 33445556777889999999999999878899999999999999999999999999999998998777655432111111
Q ss_pred ccCccccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceecc
Q 004665 83 LQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (738)
Q Consensus 83 ~~~~~~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~ 162 (738)
+.....++.+++++++||..++.+|+..|+.+|++++|+++++.+|.++..+.|..+.|+.||+.|.|||+++||.+++.
T Consensus 84 ~~~~~~~~~~qa~aa~Gq~~l~~~~~~~f~~~g~~~~qillT~~~~~~~~~~~~~~~~l~~ll~~g~iPVv~~nd~v~~~ 163 (718)
T PLN02418 84 LQKPQMELDGKACAAVGQSELMALYDTLFSQLDVTASQLLVTDSDFRDPDFRKQLSETVESLLDLRVIPIFNENDAVSTR 163 (718)
T ss_pred CCCCcchHHHHHHHHhhHHHHHHHHHHHHHHcCCeEEEEEecHhHhcchhHhHhHHHHHHHHHHCCCEEEEcCCCCcccc
Confidence 11111234556899999999999999999999999999999999998877777789999999999999999999988863
Q ss_pred CCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeec
Q 004665 163 KAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR 242 (738)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~ 242 (738)
.. + + | ++.+.|+|+|++|+++|.+|+|++|+|+|||||||++||++|++++|++++.
T Consensus 164 ~~------------~----~-----~--~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~ 220 (718)
T PLN02418 164 RA------------P----Y-----E--DSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIK 220 (718)
T ss_pred cc------------c----c-----c--cccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecc
Confidence 21 0 0 0 1123568899999999999999999999999999999998899999999987
Q ss_pred cchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccCCCCCCCH--HHHHHHH
Q 004665 243 AKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMA 320 (738)
Q Consensus 243 ~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~~~~~~~~--~~v~~av 320 (738)
.+...++..++.+.+++|||.+|+++|..+.++|++|+|+||+.++.+.++++|+..||++.++.|.|... +++++++
T Consensus 221 ~~~~~~i~~~~~s~~~tGGM~~Kl~Aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~~~~~~~~~~~~~~~~ 300 (718)
T PLN02418 221 EKHQDEITFGEKSRVGRGGMTAKVKAAVNAASAGIPVVITSGYALDNIRKVLRGERVGTLFHQDAHLWAPSKEVGAREMA 300 (718)
T ss_pred cchhhhhhcccccccCCCCcHHHHHHHHHHHHCCCcEEEeCCCCcchHHHHhcCCCCceEeccccchhhhccHHHHHHHH
Confidence 76654455555567899999999999999999999999999999999999999998999999887777633 4699999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhc
Q 004665 321 VAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADM 400 (738)
Q Consensus 321 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 400 (738)
++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++..+|+|++..+.+.+..+..++..+++.++++++.
T Consensus 301 ~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~ 380 (718)
T PLN02418 301 VAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADM 380 (718)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988888888855444443334456899999999999987
Q ss_pred cccccccccccccCCCceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc
Q 004665 401 EEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT 480 (738)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a 480 (738)
.++.|+..+......+...+++|+|+|||++|+||||+.+.++++|||+|||+||+||||+||+|+.+|+++++++
T Consensus 381 ~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA---- 456 (718)
T PLN02418 381 EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA---- 456 (718)
T ss_pred ccccCccccccccCCCceEEEEEEeeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH----
Confidence 5566654431111234446788999999999999999765599999999999999999999999999999999873
Q ss_pred cCcCc----EEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHHHHHHHHH
Q 004665 481 VGEKL----IGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDA 556 (738)
Q Consensus 481 lP~gv----v~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~ 556 (738)
||+|+ +|+|+|+++++++|..||+||+|+||||+..++++++.+.||++||||||||+||++|||+|.|++.+++|
T Consensus 457 lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~ 536 (718)
T PLN02418 457 IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDA 536 (718)
T ss_pred ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHH
Confidence 78885 99999766788999999999999999999999999887789999999999999999999999999999999
Q ss_pred ccccCceecccceeEEeccccchH-HHHHHHHHHHhcCceeecCCcccccccCCCCCccccCcccceEEEEEeCCHHHHH
Q 004665 557 KIDYPAACNAMETLLVHKDLACNG-ALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAI 635 (738)
Q Consensus 557 ~f~n~G~C~a~~rvlV~~~i~dd~-f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~i~~eE~FGPVl~v~~~~~~dEAi 635 (738)
+|.|+|+|+|++|+|||++|| |+ .+..+++.+.+.|++++|+++..+++.+++|++++||+||||++|++|+|+||||
T Consensus 537 ~~~nGQ~C~a~~RllVh~~i~-d~G~~~~~i~~a~~~Ga~l~Gg~~~~g~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI 615 (718)
T PLN02418 537 KTDYPAACNAMETLLVHKDLV-QNGGLNDLLVALRSAGVTLYGGPRASKLLNIPEAQSFHHEYSSLACTVEIVDDVHAAI 615 (718)
T ss_pred hCCCCCccccCcEEEEecccc-ccccHHHHHHHHHHCCCEEECCccccCeeCCCCchhhhCCcCCeeEEEEEECCHHHHH
Confidence 999966999999999999999 68 7788888888999988877543234334678999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 636 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 636 ~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+++|+++|||+++|||+|.+++++|++++++|+||||+++...+..||||+++||+|+|+.+++|++|+++||+.|+|.+
T Consensus 616 ~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~ 695 (718)
T PLN02418 616 DHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILR 695 (718)
T ss_pred HHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEE
Confidence 99999999999999999999999999999999999999877667789999999999766666679999999999999999
Q ss_pred cCcccccCCCCceeeeccccCCC
Q 004665 716 GNGHVVDGDQGVVYTHKNLALQS 738 (738)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~ 738 (738)
+.|++|+++++.+|+|+.|||||
T Consensus 696 g~g~~~~~~~~~~~~~~~~~~~~ 718 (718)
T PLN02418 696 GNGQVVDGDKGVVYTHKDLPLQS 718 (718)
T ss_pred CCCeecCCCCCcccccccccCCC
Confidence 99999999999999999999997
No 2
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=2.6e-120 Score=1065.16 Aligned_cols=704 Identities=75% Similarity=1.102 Sum_probs=611.2
Q ss_pred hhccCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCcccc
Q 004665 10 FVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (738)
Q Consensus 10 ~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~ 89 (738)
.+++.+++|||+|||+|++++++++.+.+.+++++|+.|++.|++||||.||+.++|+..++++.....+..++......
T Consensus 3 ~~~~~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~ 82 (715)
T TIGR01092 3 FLKDVKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPE 82 (715)
T ss_pred hhhcCCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCch
Confidence 35567899999999999998778999999999999999999999999999999999998887665432222223333345
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccc
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVT 169 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~ 169 (738)
+++++++++||..++.+|+..|+.+++++.|+++++.||.++..+.|..+.|+.||+.|+|||+++||+|++... +
T Consensus 83 ~~~qa~aa~gq~~L~~~y~~~f~~~~i~~aQ~Llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVin~nD~V~~~~~--~-- 158 (715)
T TIGR01092 83 LDGKACAAVGQSGLMALYETMFTQLDITAAQILVTDLDFRDEQFRRQLNETVHELLRMNVVPVVNENDAVSTRAA--P-- 158 (715)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeeEEEEechhhcccHHHHHHHHHHHHHHHHCCCEEEEcCCCccccccc--c--
Confidence 677899999999999999999999999999999999999988888888999999999999999999999987421 0
Q ss_pred cccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHH
Q 004665 170 HKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEI 249 (738)
Q Consensus 170 ~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i 249 (738)
+ .+..|.++|+|++|+++|.+|+||+|+|+|||||||++||++|++++|++++..+....+
T Consensus 159 -------~------------~~~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i 219 (715)
T TIGR01092 159 -------Y------------SDSQGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEI 219 (715)
T ss_pred -------c------------ccccceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhh
Confidence 0 012345799999999999999999999999999999999988999999999987665456
Q ss_pred hcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccCCCCCCCH--HHHHHHHHHHHHHH
Q 004665 250 TFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMAVAARESS 327 (738)
Q Consensus 250 ~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~~~~~~~~--~~v~~av~~A~~A~ 327 (738)
..++.+.+++|||.+|+++|..+.++|++++|+||..++.+.++++|+..||++.++.+-|+.. +++++.+++|++||
T Consensus 220 ~~~~~~~~~tGGM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~~~~~~~~~~~~~~~~~~~~~~~A~~A~ 299 (715)
T TIGR01092 220 TFGTKSRLGRGGMTAKVKAAVWAAYGGTPVIIASGTAPKNITKVVEGKKVGTLFHEDAHLWPTVEQTGERDMAVAARESS 299 (715)
T ss_pred ccCcccccCCCCchHHHHHHHHHHHCCCeEEEeCCCCcchHHHHhcCCCCceEecccchhhhhhhHHHHHHHHHHHHHHH
Confidence 5555567889999999999999999999999999999999999999998999998775444312 35899999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccccccc
Q 004665 328 RRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQI 407 (738)
Q Consensus 328 ~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 407 (738)
+.|+.+|.++|.++|++++++|++|+++|++++.+|+..+++.+..+.++.++..+..++.++++.+++|++..++.+..
T Consensus 300 ~~w~~~~~~~R~~~L~~la~~l~~~~eei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~~~~~g~~ 379 (715)
T TIGR01092 300 RMLQALSSEQRKEILHDIADALEDNEDEILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAMEDPIGRV 379 (715)
T ss_pred HhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcCCCccccc
Confidence 99999999999999999999999999999999999998777656667778888899999999999999999855555554
Q ss_pred ccccccCCCceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEE
Q 004665 408 LKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIG 487 (738)
Q Consensus 408 ~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~ 487 (738)
.+......+...+++|+|+|||++|+||+|..++++++|||+|||+||+||||.||+|+.+|+++++++|.+..|++++|
T Consensus 380 ~~~~~~~~~~~~~~~~~P~GVV~~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~alp~g~~~~~~~ 459 (715)
T TIGR01092 380 LKRTRIADNLILEKTSVPIGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEAIPIHVGKKLIG 459 (715)
T ss_pred ccccccCCCceeEEEEeeceEEEEEeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 32111122344578899999999999999976679999999999999999999999999999999998532222334789
Q ss_pred EecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCceeccc
Q 004665 488 LVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAM 567 (738)
Q Consensus 488 vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G~C~a~ 567 (738)
+|+++++++++|..||+||+|+||||+++||+|+++|.+|+++|||||||+||++|||++.|++.+++++|.|+|+|+|+
T Consensus 460 ~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a~ 539 (715)
T TIGR01092 460 LVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNAM 539 (715)
T ss_pred EeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCccccC
Confidence 99866678899999999999999999999999998888999999999999999999999999988888888775599999
Q ss_pred ceeEEeccccchH-HHHHHHHHHHhcCceeecCCcccccccC--CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCC
Q 004665 568 ETLLVHKDLACNG-ALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSA 644 (738)
Q Consensus 568 ~rvlV~~~i~dd~-f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~G 644 (738)
+|+|||++|| |+ +++++++.+.+.|++++|+.+...++++ ++|++|+||+||||++|++|+|+||||+++|+++||
T Consensus 540 ~rvlV~~~i~-d~~~~~~~v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~g 618 (715)
T TIGR01092 540 ETLLVHKDLL-RNGLLDDLIDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSA 618 (715)
T ss_pred cEEEEehhhc-cchhHHHHHHHHHHCCCEEECCcchhheeccCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCC
Confidence 9999999999 56 7788888888888888777543334342 468999999999999999999999999999999999
Q ss_pred cEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEEcCcccccCC
Q 004665 645 HTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGD 724 (738)
Q Consensus 645 Lsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~~~~~~~~ 724 (738)
|++||||+|.+++++|++++++|+||||+++...+..||||+++||+|+++.|++|++|+++||+.|+|.++.|++|+++
T Consensus 619 La~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~~~~~ 698 (715)
T TIGR01092 619 HTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQVVSGD 698 (715)
T ss_pred CeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCeecCCC
Confidence 99999999999999999999999999999876667789999999999876666789999999999999999999999999
Q ss_pred CCceeeeccccCC
Q 004665 725 QGVVYTHKNLALQ 737 (738)
Q Consensus 725 ~~~~~~~~~~~~~ 737 (738)
++.+|+|+.||+.
T Consensus 699 ~~~~~~~~~~~~~ 711 (715)
T TIGR01092 699 HGLVYTHKDLPIP 711 (715)
T ss_pred CCcceecccCCcc
Confidence 9999999999863
No 3
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=8e-84 Score=718.05 Aligned_cols=408 Identities=42% Similarity=0.716 Sum_probs=370.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+++++++|+++++.+++..+..++..+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999888888777788888889999999
Q ss_pred HHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHH
Q 004665 393 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 472 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l 472 (738)
.+++++.+++..+...+......+...+++++|+|||++|+||+|.+++++++|||+|||+||+||||.||+|+.+++++
T Consensus 83 ~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l 162 (417)
T PRK00197 83 GLRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAV 162 (417)
T ss_pred HHHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHH
Confidence 99999876665554333211122335788999999999999998888889999999999999999999999999999999
Q ss_pred HHhhCCCc-cCcCcEEEecC-C-ChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHH
Q 004665 473 ITSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 549 (738)
Q Consensus 473 ~~~al~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~A 549 (738)
+.+++.++ +|+|++|+|++ + ++++++|..||+||+|+||||+++|++|++.+.||+++|||||||+||++|||+|.|
T Consensus 163 ~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~A 242 (417)
T PRK00197 163 IQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKA 242 (417)
T ss_pred HHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHH
Confidence 98888889 99999999994 4 457899999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHHccccCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCccccccc-C--CCCCccccCcccceEEEE
Q 004665 550 KNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I--PETRLFHHEYNSMVCTVE 626 (738)
Q Consensus 550 a~~iv~~~f~n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v--~~~~i~~eE~FGPVl~v~ 626 (738)
++.+++|+|.|+|+|+|++|+|||++|| |+|+++|+++++++++.+.|++....++| | ++|++++||+||||++|+
T Consensus 243 a~~iv~~~~~n~G~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FGPVl~v~ 321 (417)
T PRK00197 243 LKIVLNAKTQRPSVCNALETLLVHEAIA-EEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILAVK 321 (417)
T ss_pred HHHHHHhccCCCcccccceEEEEEHHHh-HHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhCceEEEE
Confidence 9999999999999999999999999999 79999999999999987776654334668 4 578999999999999999
Q ss_pred EeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhh
Q 004665 627 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 706 (738)
Q Consensus 627 ~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ 706 (738)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+..|||++++||+|.++.+++|++|+++
T Consensus 322 ~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~ 401 (417)
T PRK00197 322 VVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEE 401 (417)
T ss_pred EeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHh
Confidence 99999999999999999999999999999999999999999999999877667789999999999866667889999999
Q ss_pred cceeeEEEEcCcccc
Q 004665 707 LLTTRWILRGNGHVV 721 (738)
Q Consensus 707 ft~~K~v~~~~~~~~ 721 (738)
||+.|+++++++++|
T Consensus 402 ~~~~k~v~~~~~~~~ 416 (417)
T PRK00197 402 LTTYKYIVLGDGQIR 416 (417)
T ss_pred hcEEEEEEECCCeeC
Confidence 999999999988876
No 4
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=1.6e-82 Score=705.38 Aligned_cols=398 Identities=45% Similarity=0.757 Sum_probs=359.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHH
Q 004665 318 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 397 (738)
Q Consensus 318 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~ 397 (738)
+.+++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+++++++|++++..+++..+..+++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999998888777778888888999999999999
Q ss_pred hhccccccccccccccCCCceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhC
Q 004665 398 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 477 (738)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al 477 (738)
+...+..+...+......+...+++|+|+|||++|+||+|++++++++|||+|||+||+||||+||+++.+++++++++|
T Consensus 82 a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l 161 (406)
T cd07079 82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161 (406)
T ss_pred HhcCCCCcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHH
Confidence 87655444433221112233567889999999999999888888999999999999999999999999999999999887
Q ss_pred CCc-cCcCcEEEecC-CC-hhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHHHHHHH
Q 004665 478 PDT-VGEKLIGLVTS-RE-EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 554 (738)
Q Consensus 478 ~~a-lP~gvv~vv~~-~~-~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~Aa~~iv 554 (738)
.++ +|+|++|+|++ +. +++++|.+||+||+|+||||+++|++|+++|.+|+++|||||||+||++|||+|.|++.++
T Consensus 162 ~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~ 241 (406)
T cd07079 162 EEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVV 241 (406)
T ss_pred HHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHH
Confidence 788 99999999996 43 6789999999999999999999999999888999999999999999999999999999999
Q ss_pred HHccccCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcccccc-c-C-CCCCccccCcccceEEEEEeCCH
Q 004665 555 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-Q-I-PETRLFHHEYNSMVCTVEIVDDV 631 (738)
Q Consensus 555 ~~~f~n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~-p-v-~~~~i~~eE~FGPVl~v~~~~~~ 631 (738)
+|+|.|+|+|+|++|+|||++|| |+|+++|+++++++|+++.++.+...++ | + ++|++++||+||||++|++|+|+
T Consensus 242 ~~~f~n~G~C~a~~rv~V~~si~-d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~~ 320 (406)
T cd07079 242 NAKTQRPSVCNALETLLVHRDIA-EEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320 (406)
T ss_pred HcccCCCcccccceeEEEeHHHH-HHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeEEEEeCCH
Confidence 99999999999999999999999 7999999999999998887665433345 4 5 57999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceee
Q 004665 632 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 632 dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+..|||++++||+|++.++++|++|+++||+.|
T Consensus 321 deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k 400 (406)
T cd07079 321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYK 400 (406)
T ss_pred HHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEE
Confidence 99999999999999999999999999999999999999999987666678999999999976566788999999999999
Q ss_pred EEEEc
Q 004665 712 WILRG 716 (738)
Q Consensus 712 ~v~~~ 716 (738)
++..+
T Consensus 401 ~i~~~ 405 (406)
T cd07079 401 YIVRG 405 (406)
T ss_pred EEEeC
Confidence 99765
No 5
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.9e-81 Score=674.06 Aligned_cols=399 Identities=17% Similarity=0.207 Sum_probs=352.9
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
++-+|+.++++...+ .+||++||++||+||+ .|++++..+|.++|+++|+++++++++|+...+.|-+|+
T Consensus 42 nP~tg~~i~~v~~~~------~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp-- 113 (501)
T KOG2450|consen 42 NPATGEVIAKVAEAT------EEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKP-- 113 (501)
T ss_pred cCCCCCeEEEecccc------HHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCc--
Confidence 345788889988888 8999999999999999 799999999999999999999999999999877665443
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
+.+++ ..++..+++.+++++++++.. +...+. ..+...|++++|+|||+.|+|| ||+ +..||++|
T Consensus 114 --~~~a~-------~~Dl~~~~~~~ry~ag~ad~~~~~~~~~---~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaP 181 (501)
T KOG2450|consen 114 --YPEAL-------VSDLPPAIDCFRYYAGWADKIHGSTIPT---DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAP 181 (501)
T ss_pred --chhhh-------hcCchhhhhHHHhhccchhhcccccCCC---CCceEEEecCCcceeeeEeccCchHHHHHHHhhhh
Confidence 22322 146888999999999988654 544332 3456789999999999999998 596 46799999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+||||+||+|++.+++++++ + ||+||+|+|+| +.++++.|.+||+|++|+||||+.+|+.|++++
T Consensus 182 ALa~GNtvV~Kpae~tplsal~~~~l~~e----aG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aa 257 (501)
T KOG2450|consen 182 ALAAGNTVVLKPAEQTPLTALYLASLCKE----AGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAA 257 (501)
T ss_pred HHhhCcEEEecCCCCCCchHHHHHHHhHH----hcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhh
Confidence 99999999999999999999999999987 7 99999999997 788999999999999999999999999999887
Q ss_pred C----CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHh-cCc----
Q 004665 525 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV---- 594 (738)
Q Consensus 525 ~----~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~-~~~---- 594 (738)
+ ||++||||||+|.||++|||+|.|++.++.+.|+|.| +|++.+|+|||++|| |+|++++++++++ +.+
T Consensus 258 a~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iy-defv~~~v~~a~~~~kvGdP~ 336 (501)
T KOG2450|consen 258 AESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIY-DEFVEKFVAAAKKKLKVGDPF 336 (501)
T ss_pred hhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHH-HHHHHHHHHHHhcccccCCCC
Confidence 3 9999999999999999999999999999999999988 999999999999999 7999999999965 422
Q ss_pred ------------------------------ee-ecCCcc--cccc--c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 ------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 ------------------------------~~-~g~~~~--~~~~--p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ +||.+. .++| | | ++|.+++||+||||++|++|++.||
T Consensus 337 ~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE 416 (501)
T KOG2450|consen 337 DEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEE 416 (501)
T ss_pred CcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHH
Confidence 11 243332 2344 5 3 4699999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
+|++||+++|||+++|||+|.++++++++++++|+||||+........||||.+.||+| ++.|.++++.||+.|+|
T Consensus 417 ~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~G----RE~g~~~l~~ytevKtv 492 (501)
T KOG2450|consen 417 VIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIG----RELGEYGLEAYTEVKTV 492 (501)
T ss_pred HHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCC----ccccHHHHhhcceeeEE
Confidence 99999999999999999999999999999999999999999888889999999999987 46799999999999999
Q ss_pred EEcCcc
Q 004665 714 LRGNGH 719 (738)
Q Consensus 714 ~~~~~~ 719 (738)
+++.++
T Consensus 493 ~v~~~~ 498 (501)
T KOG2450|consen 493 TVKLPQ 498 (501)
T ss_pred EEeCCC
Confidence 987653
No 6
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=5.4e-81 Score=640.45 Aligned_cols=399 Identities=16% Similarity=0.179 Sum_probs=350.4
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.+|.+.... -+|.++|+++|.+||.+|++++..+|..+|+++.++|.+|.++|++.++.|-||+.
T Consensus 43 V~nPa~geii~~V~~~~------V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL- 115 (503)
T KOG2451|consen 43 VDNPANGEIIGKVADMT------VEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPL- 115 (503)
T ss_pred ccCCCccchhhcccCCc------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCch-
Confidence 45678888889887777 78999999999999999999999999999999999999999999999986655442
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
.+ +..|+.+.+..++||++.+++ .|...++. ....+..+.++|+||+++|+|| ||. +..+|+++
T Consensus 116 ---~e--------A~gEv~y~a~f~eWyAeEA~RvyGdii~s~--~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 116 ---GE--------AKGEVAYSAAFFEWYAEEARRVYGDIIPSL--NPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred ---hh--------ccceeehhHHHHHHHHHHhhhhhccccCCC--CCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 12 345788888899999876654 57666432 2456678899999999999998 686 55699999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC----CChhhHhhhcCCCcCEEEeecCHHHHHHHH
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS----REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 521 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~----~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~ 521 (738)
||++|||||+|||++||++++.++++..+ | +|+|++|+++. ..+.+..|..+|+|++|+|||||.+||.++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~----AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEE----AGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHH----cCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 99999999999999999999999999987 7 99999999983 347889999999999999999999999999
Q ss_pred HhCC---CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---
Q 004665 522 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 594 (738)
Q Consensus 522 ~~a~---~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--- 594 (738)
+++. |++.||||||.|+||++|||||+|++..+..+|.|+| +|++++|+|||++|| |+|+.+|.++++++.+
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iy-D~Fv~~l~e~vkkl~vGdG 337 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIY-DKFVSKLAEAVKKLKVGDG 337 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhH-HHHHHHHHHHHHheeccCC
Confidence 8773 9999999999999999999999999999999999998 999999999999999 7999999999998632
Q ss_pred -------------------------------e-eecCCcc---c-ccc-c-C-----CCCCccccCcccceEEEEEeCCH
Q 004665 595 -------------------------------G-LFGGPRA---S-KLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 631 (738)
Q Consensus 595 -------------------------------~-~~g~~~~---~-~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~ 631 (738)
+ ++||.+. . .+| | | ++|.+..||+|||+.+|++|+|+
T Consensus 338 ~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte 417 (503)
T KOG2451|consen 338 LDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE 417 (503)
T ss_pred CCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH
Confidence 1 1233311 1 133 5 2 35888999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceee
Q 004665 632 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 632 dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
||+|++|||++.||++|+||+|..+..|++++|++|+|-+|.........||||.++||+| ++++.+|+++|+.+|
T Consensus 418 eEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~G----REgskyGidey~~ik 493 (503)
T KOG2451|consen 418 EEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFG----REGSKYGIDEYLVIK 493 (503)
T ss_pred HHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccC----ccccccchhhhhhhh
Confidence 9999999999999999999999999999999999999999998878888999999999997 367899999999999
Q ss_pred EEEEcC
Q 004665 712 WILRGN 717 (738)
Q Consensus 712 ~v~~~~ 717 (738)
+++++.
T Consensus 494 ~icig~ 499 (503)
T KOG2451|consen 494 YICIGT 499 (503)
T ss_pred eeeecC
Confidence 998864
No 7
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=2.7e-78 Score=679.23 Aligned_cols=396 Identities=21% Similarity=0.224 Sum_probs=341.4
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++|+++|++||+.|+++++.+|.++|++++++|++|+++|+++++.|.+|+.
T Consensus 19 ~nP~tg~~i~~~~~a~------~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i-- 90 (472)
T COG1012 19 INPATGEVIATVPAAT------AEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPI-- 90 (472)
T ss_pred eCCCCCCEEeeecCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3467889999998888 88999999999999999999999999999999999999999999999987765542
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
.++ ..++..+++.++++++..+. .+...+. ..+...+++|+|+|||++|+|| ||+ +.+++++||
T Consensus 91 --~ea--------~~ei~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apA 157 (472)
T COG1012 91 --SEA--------RGEIARAADFIRYYAEEARRLEGETIPT---DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPA 157 (472)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCCccCC---CCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHH
Confidence 122 23477777788877765542 2332221 1145678999999999999998 696 678999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+|||+.||+|+..+++++.+ + ||+|++|+|+| +.++++.|..||+|++|+||||+++|++|++.|
T Consensus 158 LaaGntVV~KPse~tp~sa~~l~~~~~~----aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa 233 (472)
T COG1012 158 LAAGNTVVLKPSEQTPLSALALAELAAE----AGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233 (472)
T ss_pred HHcCCEEEEECcccCcHHHHHHHHHHHH----hCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh
Confidence 9999999999999999999999999987 5 99999999996 556888899999999999999999999999887
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHh-cCc------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV------ 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~-~~~------ 594 (738)
.||++||||||||+||++|||+|.|++.+++|+|.|+| +|+|.+|+|||+++| |+|+++|+++ ++ +.+
T Consensus 234 ~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~-d~f~~~l~~~-~~~l~~Gd~~d~ 311 (472)
T COG1012 234 ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVY-DEFVERLVAR-AASLKVGDPLDP 311 (472)
T ss_pred hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhH-HHHHHHHHHH-HhcCCCCCCCCC
Confidence 39999999999999999999999999999999999988 999999999999999 7999999999 66 111
Q ss_pred ----------------------------ee-ecCCcccccc--c-C-----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 595 ----------------------------GL-FGGPRASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 595 ----------------------------~~-~g~~~~~~~~--p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
.+ .|+.+..++| | | ++|++++||+||||++|++|+|+||||++
T Consensus 312 ~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 312 STDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 01 1222222333 5 2 47899999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCC--CCCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~--~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+|+++|||++||||+|..+++++++++++|+|+||+... .....||||.+.||+| +++|.+++++|++.|+|..
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G----~~~g~~~~~~~~~~k~v~~ 467 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG----REGGKYGLEEFTEVKTVTI 467 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhcceEEEE
Confidence 999999999999999999999999999999999998753 3466899999999987 3568999999999999987
Q ss_pred cC
Q 004665 716 GN 717 (738)
Q Consensus 716 ~~ 717 (738)
..
T Consensus 468 ~~ 469 (472)
T COG1012 468 KL 469 (472)
T ss_pred ec
Confidence 64
No 8
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=5.2e-77 Score=673.85 Aligned_cols=397 Identities=17% Similarity=0.164 Sum_probs=342.4
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+||++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.|++..
T Consensus 31 ~nP~tg~~v~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 103 (482)
T PRK11241 31 TNPANGDKLGSVPKMG------ADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLA- 103 (482)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4567899999998888 899999999999999999999999999999999999999999999998877665432
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..|+..+++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 104 ---~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (482)
T PRK11241 104 ---EA--------KGEISYAASFIEWFAEEGKRIYGDTIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 170 (482)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHH
Confidence 21 24677777888777654432 23322211 1233457889999999999998 696 567999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+||||.||+++.++++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+++|++|++.+
T Consensus 171 LaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa 246 (482)
T PRK11241 171 LAAGCTMVLKPASQTPFSALALAELAIR----AGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246 (482)
T ss_pred HHhCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999987 7 99999999996 566788888999999999999999999999877
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 325 (482)
T PRK11241 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY-DRFAEKLQQAVSKLHIGDGLEKG 325 (482)
T ss_pred hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHH-HHHHHHHHHHHhhCCCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ---------------------------ee-ecCCcc--ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHHHHH
Q 004665 595 ---------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 636 (738)
Q Consensus 595 ---------------------------~~-~g~~~~--~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~ 636 (738)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+||||+
T Consensus 326 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~ 405 (482)
T PRK11241 326 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIA 405 (482)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHH
Confidence 12 243321 233 3 6 2 4689999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEEc
Q 004665 637 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 637 ~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~ 716 (738)
++|+++|||++||||+|.++++++++++++|+||||+.....+..||||.|.||+| +++|.+|+++||+.|+|++.
T Consensus 406 ~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 406 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLG----REGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccC----cccHHHHHHHhhcceEEEEe
Confidence 99999999999999999999999999999999999987665667899999999986 35799999999999998764
No 9
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=5.5e-77 Score=655.88 Aligned_cols=388 Identities=44% Similarity=0.733 Sum_probs=344.3
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccc
Q 004665 323 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE 402 (738)
Q Consensus 323 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 402 (738)
|++||+.|+++|.++|.++|++++++|++|+++|+++++.|+..++|+|++..+.+++..+..+++.+++.++++++.++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999998888888889998765555555667789999999999998776
Q ss_pred cccccccccccCCCceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-c
Q 004665 403 PIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-V 481 (738)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-l 481 (738)
..|+..+......+...+++|+|+|||++|+||+|++++++++|||++||+||+||||.||+|+..|++++++++.++ |
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGl 160 (398)
T TIGR00407 81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160 (398)
T ss_pred CCcccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 655443321112355678899999999999999888888999999999999999999999999999999998888789 9
Q ss_pred CcCcEEEecC-C-ChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccc
Q 004665 482 GEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKID 559 (738)
Q Consensus 482 P~gvv~vv~~-~-~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~ 559 (738)
|+|++|+|++ + ++++++|..||+||+|+||||+.+|+.+++.+.+|+++|||||||+||++|||+|.|++.+++|+|.
T Consensus 161 P~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~ 240 (398)
T TIGR00407 161 PVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ 240 (398)
T ss_pred ChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC
Confidence 9999999995 4 3578999999999999999999999999988789999999999999999999999999999999998
Q ss_pred cCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcccccc----c-C--CCCCccccCcccceEEEEEeCCHH
Q 004665 560 YPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----Q-I--PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 560 n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~----p-v--~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
|+|+|+|++|+|||++|| |+|+++|+++++++++.+........++ | + .++++++||+||||++|++|+|+|
T Consensus 241 ~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~ 319 (398)
T TIGR00407 241 RPSTCNAIETLLVNKAIA-REFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLE 319 (398)
T ss_pred CCCcccccceEEEeHHHH-HHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEEEEECCHH
Confidence 755999999999999999 7999999999998876542211111112 2 2 357899999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceee
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
|||+++|+++|||++||||+|.+++++|++++++|+|+||+++...+..|||.|.+.|+|+++.|.+|+.+++.||+.|
T Consensus 320 eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999999999999999999999999999999999999998888889999999999999999999999999999876
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=2e-76 Score=674.96 Aligned_cols=399 Identities=17% Similarity=0.194 Sum_probs=339.8
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+..
T Consensus 134 ~nP~tg~~i~~v~~a~------~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~- 206 (604)
T PLN02419 134 INPATQEVVSKVPLTT------NEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLK- 206 (604)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 3467899999999988 899999999999999999999999999999999999999999999999888766532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..|+..+++.++++++..+. .+...+.. ..+...+++|+|+|||++|+|| ||+ +.+++++||
T Consensus 207 ---ea--------~~EV~~~i~~~~~~a~~a~~~~g~~~~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapA 273 (604)
T PLN02419 207 ---DS--------HGDIFRGLEVVEHACGMATLQMGEYLPNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVA 273 (604)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhhCCccccc--CCCccceEEecCccEEEEECCCccHHHHHHHHHHHH
Confidence 22 23566677777776654332 23222211 1233457889999999999998 696 567999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+.||+++.+|++++.+ + ||+|+||+|+|..++++.|..||+||+|+||||+++|+.|+++|
T Consensus 274 LaAGNtVVlKPSe~tp~ta~~l~~l~~e----AGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~ 349 (604)
T PLN02419 274 VTCGNTFILKPSEKDPGASVILAELAME----AGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349 (604)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHH----hCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc
Confidence 9999999999999999999999999987 7 99999999997556677788899999999999999999999876
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|++||||||||+||++|||||.|++.+++|+|.|+| +|+|++|||||++ | |+|+++|+++++++.+
T Consensus 350 ~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~-d~f~e~l~~~~~~l~vG~p~d~~t 427 (604)
T PLN02419 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-A-KSWEDKLVERAKALKVTCGSEPDA 427 (604)
T ss_pred cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-H-HHHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999988 9999999999999 9 7999999999887532
Q ss_pred --------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+.+. .+ |+ | | ++|.+++||+||||++|++|+|+||
T Consensus 428 ~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dE 507 (604)
T PLN02419 428 DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDE 507 (604)
T ss_pred CccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHH
Confidence 22 244221 13 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||.|.||+|+ .+++|.+|+++||+.|+
T Consensus 508 AI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~--~~~~G~~gl~~ft~~K~ 585 (604)
T PLN02419 508 AISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGD--LNFYGKAGVDFFTQIKL 585 (604)
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCC--CcccHHHHHHHhhCeEE
Confidence 99999999999999999999999999999999999999987433 4678999999999862 12579999999999999
Q ss_pred EEEcC
Q 004665 713 ILRGN 717 (738)
Q Consensus 713 v~~~~ 717 (738)
|+++.
T Consensus 586 v~~~~ 590 (604)
T PLN02419 586 VTQKQ 590 (604)
T ss_pred EEEcc
Confidence 98764
No 11
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=2.8e-76 Score=663.34 Aligned_cols=386 Identities=19% Similarity=0.208 Sum_probs=324.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
..||++++++|++||+.|+++|.++|.++|++++++|++|+|+|++++++|+||+.. ++...++..+..+++++++
T Consensus 9 ~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~----~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 9 AADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL----ESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999999998876632 2322344444556666666
Q ss_pred HHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHH
Q 004665 393 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 470 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~ 470 (738)
.++.+.+... ...... ..+...+++|+|+|||++|+|| ||. +++++++|||+|||+||+||||.||+++.+++
T Consensus 85 ~~~~~~~~~~---~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~ 159 (484)
T PLN02174 85 QLKNWMAPEK---AKTSLT--TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLA 159 (484)
T ss_pred HHHHHhcccc---cccccc--cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence 6665543111 011111 1123467899999999999998 696 67899999999999999999999999999999
Q ss_pred HHHHhhCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHH
Q 004665 471 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 547 (738)
Q Consensus 471 ~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld 547 (738)
+++++ +||+|++|+|+|+.+.+..|.+ |+||+|+||||+++|++|+++| .+|++||||||||+||++|||+|
T Consensus 160 ~l~~~----~lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~ 234 (484)
T PLN02174 160 KLLEQ----YLDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLK 234 (484)
T ss_pred HHHHH----hCCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHH
Confidence 99986 4999999999964444444554 7899999999999999999877 49999999999999999999999
Q ss_pred HHHHHHHHHcc-ccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------------------------------
Q 004665 548 VAKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------- 594 (738)
Q Consensus 548 ~Aa~~iv~~~f-~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------------------------------- 594 (738)
.|++.+++++| .|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 235 ~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~g 313 (484)
T PLN02174 235 VTVRRIIAGKWGCNNGQACISPDYILTTKEYA-PKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVS 313 (484)
T ss_pred HHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHH-HHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcC
Confidence 99999999999 5887 999999999999999 7999999998876521
Q ss_pred -ee-ecCCcc-cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHh
Q 004665 595 -GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 663 (738)
Q Consensus 595 -~~-~g~~~~-~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~ 663 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 314 a~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~ 393 (484)
T PLN02174 314 DKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAAT 393 (484)
T ss_pred CEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHc
Confidence 11 244322 13 33 5 2 4689999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEECCCCCCC--CCCcccCccccccccccccccchhHHhhcceeeEEEEcC
Q 004665 664 VDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 717 (738)
Q Consensus 664 l~~G~V~iN~~~~~~--~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~ 717 (738)
+++|+|+||+..... +..||||.+.||+| +++|.+|+++||+.|+|.++.
T Consensus 394 l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~G----r~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 394 VSAGGIVVNDIAVHLALHTLPFGGVGESGMG----AYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred CCcceEEECCCcCCCCCCCCCCCCcCccccC----ccchHHHHHHhcceEEEEECC
Confidence 999999999876543 56899999999986 367999999999999998764
No 12
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=2.7e-75 Score=659.38 Aligned_cols=398 Identities=14% Similarity=0.154 Sum_probs=339.4
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+..
T Consensus 20 v~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 93 (472)
T TIGR03374 20 VYNPATGEVILEIAEAS------AEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLH 93 (472)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 34567899999999988 899999999999999999999999999999999999999999999998887765532
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++. ..++..+++.++++++..+. .+...+.. ..+...++.|+|+|||++|+|| ||. +.+++++|
T Consensus 94 ----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 94 ----SVF-------NDEIPAIVDVFRFFAGAARCLSGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 111 12555566666666543321 12211111 1234567899999999999998 696 56899999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
||++||+||+|||+.+|+++.++++++.+ +||+|++|+|+| +.++++.|..||+||+|+||||+.+|++|++++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 236 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKD----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHH----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999985 499999999996 567888888999999999999999999998877
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.||++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~~ 315 (472)
T TIGR03374 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY-DTLVEKLGAAVATLKSGAPDDES 315 (472)
T ss_pred hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 39999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred ----------------------------ee-ecCCcc--ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHHHH
Q 004665 595 ----------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 635 (738)
Q Consensus 595 ----------------------------~~-~g~~~~--~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi 635 (738)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+||||
T Consensus 316 ~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 316 TELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 11 133221 133 3 5 2 468999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 636 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 636 ~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.|.||+| +++|++|+++||+.|++++
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYG----KDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccC----ccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999988776778999999999986 3579999999999999875
No 13
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=1.2e-74 Score=657.26 Aligned_cols=403 Identities=16% Similarity=0.204 Sum_probs=342.0
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+++.++++..++ .+||++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+..
T Consensus 38 ~~nP~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~ 111 (508)
T PLN02315 38 SVNPANNQPIAEVVEAS------LEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILA 111 (508)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH
Confidence 44577899999998888 899999999999999999999999999999999999999999999999887766532
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++ ..|+..+++.++++++..+. .+...+. . ..+...+.+|+|+|||++|+|| ||+ +++++++|
T Consensus 112 ----~a--------~~ev~~~i~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 177 (508)
T PLN02315 112 ----EG--------IGEVQEIIDMCDFAVGLSRQLNGSIIPS-E-RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 177 (508)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC-C-CCCceeEEEEecceEEEEECCCcchHHHHHHHHhH
Confidence 21 23566666666666543322 1222221 1 1233446789999999999997 696 67899999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
||++||+||+||||.||+++..+++++.+++.++ +|+|++|+|+|+.+++..|..||+||+|+||||+++|+.|++.+
T Consensus 178 ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa 257 (508)
T PLN02315 178 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVN 257 (508)
T ss_pred HHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999877777777778 99999999998667788888999999999999999999999866
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 258 ~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~vG~p~~~~ 336 (508)
T PLN02315 258 ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIY-DDVLEQLLTVYKQVKIGDPLEKG 336 (508)
T ss_pred hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ---------------------------ee-ecCCcc--cc-cc-c-C----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 595 ---------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 595 ---------------------------~~-~g~~~~--~~-~~-p-v----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||++
T Consensus 337 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~ 416 (508)
T PLN02315 337 TLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEI 416 (508)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHHH
Confidence 11 233211 12 33 5 2 47899999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHH--hcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~--~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+|+++|||++||||+|.++++++++ ++++|+||||.++.. .+.+||||.|.||+| +++|.+|+++||+.|+|+
T Consensus 417 aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~ 492 (508)
T PLN02315 417 NNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCT 492 (508)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC----ccchHHHHHHHhhEEEEE
Confidence 9999999999999999999999985 799999999986544 467899999999986 357999999999999998
Q ss_pred EcC
Q 004665 715 RGN 717 (738)
Q Consensus 715 ~~~ 717 (738)
+..
T Consensus 493 ~~~ 495 (508)
T PLN02315 493 INY 495 (508)
T ss_pred Eec
Confidence 764
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=2.1e-74 Score=656.01 Aligned_cols=399 Identities=18% Similarity=0.191 Sum_probs=340.2
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 367 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~ 367 (738)
+.++.+|+.++++...+ .+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+||+
T Consensus 40 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 113 (501)
T PLN02766 40 TRDPRTGEVIARIAEGD------KEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKL 113 (501)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 34567899999999888 8999999999999997 599999999999999999999999999999998877655
Q ss_pred HhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccc-cccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHH
Q 004665 368 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 444 (738)
Q Consensus 368 ~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 444 (738)
.. ++. ..++...++.++++++..+ ..++..+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 114 ~~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 179 (501)
T PLN02766 114 FA----LGK-------AVDIPAAAGLLRYYAGAADKIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKV 179 (501)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHH
Confidence 32 211 1245566666666654332 22322211 1233467889999999999998 696 567999
Q ss_pred HHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHH
Q 004665 445 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 522 (738)
Q Consensus 445 ~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~ 522 (738)
+|||++||+||+||||.||+++.++++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+.+||+|++
T Consensus 180 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 180 APALAAGCTMVVKPAEQTPLSALFYAHLAKL----AGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHcCCEEEEeCCCCchHHHHHHHHHHHh----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5678888889999999999999999999998
Q ss_pred hCC----CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---
Q 004665 523 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 594 (738)
Q Consensus 523 ~a~----~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--- 594 (738)
.|. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||++|| |+|+++|+++++++.+
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~-d~f~~~l~~~~~~l~~G~p 334 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIY-DEFVKKLVEKAKDWVVGDP 334 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCC
Confidence 663 8999999999999999999999999999999999988 999999999999999 7999999999887521
Q ss_pred -------------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 335 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 335 FDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 12 233221 23 33 5 2 468999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.|.||+| +++|++|+++||+.|+
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~ 490 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFG----RDQGMDALDKYLQVKS 490 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceEE
Confidence 999999999999999999999999999999999999999987766677899999999986 3579999999999999
Q ss_pred EEEcC
Q 004665 713 ILRGN 717 (738)
Q Consensus 713 v~~~~ 717 (738)
|++..
T Consensus 491 v~~~~ 495 (501)
T PLN02766 491 VVTPL 495 (501)
T ss_pred EEEec
Confidence 98753
No 15
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=4.6e-74 Score=648.14 Aligned_cols=395 Identities=16% Similarity=0.220 Sum_probs=335.3
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|.|++..
T Consensus 12 ~nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 84 (462)
T PRK13968 12 VNPATGEQLSVLPWAG------ADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN- 84 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH-
Confidence 4567899999999888 899999999999999999999999999999999999999999999999888766532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..|+..+++.+++++...+. .+..... ..+...+++++|+|||++|+|| ||. +.+++++||
T Consensus 85 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~A 150 (462)
T PRK13968 85 ---QA--------RAEVAKSANLCDWYAEHGPAMLKAEPTL---VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPI 150 (462)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhhCCcccc---CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHH
Confidence 22 12455555555555533221 1111110 1234567889999999999998 696 567899999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+|||+.||+++.++++++.+ + ||+|++|+|++ ++.... +..||+||+|+||||+++|++|++.+
T Consensus 151 LaaGN~vv~KPs~~tp~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~-l~~~~~v~~V~fTGs~~~G~~i~~~aa 225 (462)
T PRK13968 151 LLAGNGYLLKHAPNVMGCAQLIAQVFKD----AGIPQGVYGWLNADNDGVSQ-MINDSRIAAVTVTGSVRAGAAIGAQAG 225 (462)
T ss_pred HHcCCEEEEECCCcChHHHHHHHHHHHH----cCcCcCcEEEEecCchhhHH-HhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 344444 66789999999999999999999887
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 226 ~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 304 (462)
T PRK13968 226 AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIA-SAFTERFVAAAAALKMGDPRDEE 304 (462)
T ss_pred hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ---------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHH
Q 004665 595 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 636 (738)
Q Consensus 595 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~ 636 (738)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 305 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~ 384 (462)
T PRK13968 305 NALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALE 384 (462)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHH
Confidence 11 233221 12 33 5 2 3578999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEEc
Q 004665 637 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 637 ~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~ 716 (738)
++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|+|.+.
T Consensus 385 ~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 385 LANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFG----RELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred HHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----cCchHHHHHHhcceeEEEEe
Confidence 99999999999999999999999999999999999988766677899999999986 36799999999999999764
No 16
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=7.1e-74 Score=645.77 Aligned_cols=398 Identities=19% Similarity=0.199 Sum_probs=334.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 6 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 78 (457)
T PRK09406 6 INPATGETVKTFTALT------DDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLA- 78 (457)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHH-
Confidence 3467899999998888 899999999999999999999999999999999999999999999999888766532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++. .|+..+++.++++++..+. .+..........+...+++++|+|||++|+|| ||+ +.+++++||
T Consensus 79 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~A 147 (457)
T PRK09406 79 ---SAK--------AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPA 147 (457)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHH
Confidence 221 2444455555554432211 11110000001223567889999999999998 696 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 525 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~- 525 (738)
|++||+||+|||+.+|+++.+|++++.+ + ||+|+||+|+++...+..|..||+|++|+||||+++|+.|++.++
T Consensus 148 LaaGN~VV~Kps~~~p~~~~~l~~l~~~----aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~ 223 (457)
T PRK09406 148 LMAGNVGLLKHASNVPQTALYLADLFRR----AGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD 223 (457)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 999999999854344556678999999999999999999988763
Q ss_pred --CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 526 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 526 --~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 224 ~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 302 (457)
T PRK09406 224 EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVY-DAFAEKFVARMAALRVGDPTDPDT 302 (457)
T ss_pred cCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred --------------------------ee-ecCCcc--ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 595 --------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 595 --------------------------~~-~g~~~~--~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
++ .|+... .++ + | | ++|.+++||+||||++|++|+|+||||++
T Consensus 303 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 382 (457)
T PRK09406 303 DVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEI 382 (457)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHH
Confidence 11 233221 133 3 5 2 35789999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.|.||+| +++|++|+++||+.|+|.+
T Consensus 383 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 383 ANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYG----RELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceEEEEe
Confidence 9999999999999999999999999999999999998777777999999999886 3579999999999999875
No 17
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=6.4e-74 Score=650.75 Aligned_cols=400 Identities=15% Similarity=0.143 Sum_probs=338.1
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
.++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++.+|.||+..
T Consensus 20 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 93 (477)
T cd07113 20 TNPATEQVIASVASAT------EADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIH 93 (477)
T ss_pred eCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHH
Confidence 4567899999998888 89999999999999985 9999999999999999999999999999998877765421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-cccccccc-c--cCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT-E--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 443 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~-~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 443 (738)
++. ..|+..+++.+++++++.+. .+...+.. . ...+...+++|+|+|||++|+|| ||. +.+++
T Consensus 94 ----~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 162 (477)
T cd07113 94 ----LSR-------AFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWK 162 (477)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHH
Confidence 211 12556666666666544332 12221110 0 01123567889999999999998 696 56899
Q ss_pred HHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHH
Q 004665 444 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 522 (738)
Q Consensus 444 ~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~ 522 (738)
++|||++||+||+|||+.||+++.++++++++ + ||+|++|+|+|...++..|..||+||+|+||||+++|+.|++
T Consensus 163 i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 238 (477)
T cd07113 163 IGAALATGCTIVIKPSEFTPLTLLRVAELAKE----AGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGR 238 (477)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999987 7 999999999964347888889999999999999999999998
Q ss_pred hC---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----
Q 004665 523 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 594 (738)
Q Consensus 523 ~a---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---- 594 (738)
.+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 317 (477)
T cd07113 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKF-DELVTKLKQALSSFQVGSPM 317 (477)
T ss_pred HHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHH-HHHHHHHHHHHHhCCCCCCC
Confidence 77 39999999999999999999999999999999999988 999999999999999 7999999999877532
Q ss_pred ------------------------------ee-ecCCcc--cccc--c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 ------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 ------------------------------~~-~g~~~~--~~~~--p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .++| | | ++|++++||+||||++|++|+|+||
T Consensus 318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 12 233321 1333 5 2 3689999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.++++++++++++|+|+||.++...+..||||.|.||+| +++|++|+++||+.|+|
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v 473 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIG----REFGSAFIDDYTELKSV 473 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCC----ccchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999987666677899999999986 35799999999999999
Q ss_pred EEc
Q 004665 714 LRG 716 (738)
Q Consensus 714 ~~~ 716 (738)
+++
T Consensus 474 ~~~ 476 (477)
T cd07113 474 MIR 476 (477)
T ss_pred EEe
Confidence 764
No 18
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=8.5e-74 Score=651.17 Aligned_cols=399 Identities=16% Similarity=0.179 Sum_probs=341.5
Q ss_pred hHHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 289 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 289 ~i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
.+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++.
T Consensus 43 ~v~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 116 (498)
T PLN02278 43 PVYNPATGEVIANVPCMG------RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL 116 (498)
T ss_pred EEECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 345678899999998888 89999999999999999999999999999999999999999999999988776553
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
. ++ ..|+..+++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||+ +.+++++
T Consensus 117 ~----~a--------~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~ 182 (498)
T PLN02278 117 K----EA--------IGEVAYGASFLEYFAEEAKRVYGDIIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVG 182 (498)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHHH
Confidence 2 22 13566666777666644322 23222211 1233457789999999999998 696 5689999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+.+|+++..|++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|++|++.
T Consensus 183 ~ALaaGN~VVlKps~~tp~~~~~l~~~l~e----aglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 258 (498)
T PLN02278 183 PALAAGCTVVVKPSELTPLTALAAAELALQ----AGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAG 258 (498)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55677888899999999999999999999987
Q ss_pred CC---CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----
Q 004665 524 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 594 (738)
Q Consensus 524 a~---~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----- 594 (738)
++ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 259 aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~ 337 (498)
T PLN02278 259 AAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIY-DKFAEAFSKAVQKLVVGDGFE 337 (498)
T ss_pred HhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 73 8999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred -----------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHH
Q 004665 595 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 634 (738)
Q Consensus 595 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEA 634 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|||
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~dea 417 (498)
T PLN02278 338 EGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEA 417 (498)
T ss_pred CCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHH
Confidence 11 233221 12 33 5 2 46899999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 635 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 635 i~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
|+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||.|.||+| +++|++|+++||+.|+|.
T Consensus 418 i~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~i~ 493 (498)
T PLN02278 418 IAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGIDEYLEIKYVC 493 (498)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhheeEEEE
Confidence 9999999999999999999999999999999999999987665567899999999986 357999999999999998
Q ss_pred Ec
Q 004665 715 RG 716 (738)
Q Consensus 715 ~~ 716 (738)
++
T Consensus 494 ~~ 495 (498)
T PLN02278 494 LG 495 (498)
T ss_pred Ee
Confidence 74
No 19
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=4.8e-74 Score=655.87 Aligned_cols=398 Identities=17% Similarity=0.187 Sum_probs=339.4
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
.++.+|+.++++...+ .+|+++|+++|++||+. |++++.++|.++|++++++|++|+++|++++++|.+|+.
T Consensus 78 ~~P~tg~~i~~v~~~~------~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 78 LDPRTGEVIAHVAEGD------AEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3466899999998888 89999999999999984 999999999999999999999999999999987776543
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
. ++. ..|+...++.+++++.+.+. .+...+. ..+...+++++|+|||++|+|| ||+ +.+++++
T Consensus 152 ~----~a~-------~~Ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~ 217 (538)
T PLN02466 152 E----QSA-------KAELPMFARLFRYYAGWADKIHGLTVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 217 (538)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHHh
Confidence 2 211 13566677777776654432 2332221 1223457889999999999998 596 5689999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+.||+++.++++++++ + ||+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.
T Consensus 218 pALaaGN~VVlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~ 293 (538)
T PLN02466 218 PALACGNTIVLKTAEQTPLSALYAAKLLHE----AGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293 (538)
T ss_pred HHHHcCCEEEeECCCCCcHHHHHHHHHHHh----cCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56778889999999999999999999999876
Q ss_pred CC----CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----
Q 004665 524 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 594 (738)
Q Consensus 524 a~----~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---- 594 (738)
|+ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|++++.++.+
T Consensus 294 aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~vG~p~ 372 (538)
T PLN02466 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY-DEFVEKAKARALKRVVGDPF 372 (538)
T ss_pred HHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCc
Confidence 63 7999999999999999999999999999999999988 999999999999999 7999999987765421
Q ss_pred ------------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||
T Consensus 373 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~de 452 (538)
T PLN02466 373 KKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDE 452 (538)
T ss_pred cCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHH
Confidence 11 233221 12 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.|.||+| +++|++|+++||+.|+|
T Consensus 453 Ai~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G----~~~G~~gl~~ft~~k~v 528 (538)
T PLN02466 453 VIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIG----REKGIYSLNNYLQVKAV 528 (538)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccC----cccHHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999987766677899999999986 35799999999999999
Q ss_pred EEcC
Q 004665 714 LRGN 717 (738)
Q Consensus 714 ~~~~ 717 (738)
++..
T Consensus 529 ~~~~ 532 (538)
T PLN02466 529 VTPL 532 (538)
T ss_pred EEeC
Confidence 7753
No 20
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=6.4e-74 Score=649.85 Aligned_cols=401 Identities=18% Similarity=0.218 Sum_probs=339.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.|++..
T Consensus 17 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 89 (474)
T cd07130 17 ISPANGEPIARVRQAT------PEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILP- 89 (474)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-
Confidence 4567899999998888 889999999999999999999999999999999999999999999998877765421
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..|+..+++.++++++..+.. +...+. . ..+...++.++|+|||++|+|| ||+ ++++++++|
T Consensus 90 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 90 ---EG--------LGEVQEMIDICDFAVGLSRQLYGLTIPS-E-RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCccccC-C-CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 21 124555555555555433221 222211 1 1233457789999999999997 696 567999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+.||+++.++++++.+++.++ ||+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~ 236 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA 236 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHh
Confidence 999999999999999999999999998888889 99999999997556788888999999999999999999998876
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 315 (474)
T cd07130 237 RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIY-DEVLERLKKAYKQVRIGDPLDDGT 315 (474)
T ss_pred cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999987532
Q ss_pred --------------------------ee-ecCCcc--cc-cc-c-C----CCCCccccCcccceEEEEEeCCHHHHHHHH
Q 004665 595 --------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 638 (738)
Q Consensus 595 --------------------------~~-~g~~~~--~~-~~-p-v----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~a 638 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 316 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 395 (474)
T cd07130 316 LVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWN 395 (474)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 11 133221 12 33 5 2 348899999999999999999999999999
Q ss_pred HcCCCCcEEEEEecCHHHHHHHHHh--cceeEEEECCCCC-CCCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 639 HQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 639 N~~~~GLsa~VfT~d~~~a~~~~~~--l~~G~V~iN~~~~-~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
|+++|||++||||+|.+++++++++ +++|+|+||.++. ..+.+||||.|.||+| +++|++|+++||+.|++++
T Consensus 396 N~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~k~~~~ 471 (474)
T cd07130 396 NEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRSTCTI 471 (474)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCC----ccchHHHHHHHhheEEEEE
Confidence 9999999999999999999999986 9999999998654 3467899999999986 3679999999999999887
Q ss_pred c
Q 004665 716 G 716 (738)
Q Consensus 716 ~ 716 (738)
.
T Consensus 472 ~ 472 (474)
T cd07130 472 N 472 (474)
T ss_pred e
Confidence 5
No 21
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=1.1e-73 Score=648.36 Aligned_cols=398 Identities=19% Similarity=0.183 Sum_probs=341.3
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++...+ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.||+..
T Consensus 20 v~~P~t~~~~~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 93 (480)
T cd07559 20 NYNPVNGKVLCEIPRST------AEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIR 93 (480)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 34567899999998888 899999999999999999999999999999999999999999999998877655421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++. ..++..+++.++++++..+. .+...+ ...+...+++++|+|||++|+|| ||+ +.+++++|
T Consensus 94 ----~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 94 ----ETL-------AADIPLAIDHFRYFAGVIRAQEGSLSE---IDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccc---CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 221 13566677777776654332 122211 11244567889999999999998 596 56799999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 525 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~ 525 (738)
||++||+||+|||+.||+++..+++++++ ++|+|++|+|+| +.++++.|..||+||+|+||||+.+|++|++++.
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGD----LLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA 235 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHH----hCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 5678888899999999999999999999998873
Q ss_pred ---CcEEEecCCcCeEEEcCCC-----CHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--
Q 004665 526 ---IPVLGHADGICHVYVDKSA-----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 594 (738)
Q Consensus 526 ---~p~~lElGGk~p~iV~~dA-----Dld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-- 594 (738)
+|+++|||||||+||++|| |+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 236 ~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~ 314 (480)
T cd07559 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIY-DEFIERAVERFEAIKVGN 314 (480)
T ss_pred ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCC
Confidence 8999999999999999999 999999999999999988 999999999999999 7999999999887632
Q ss_pred --------------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEE
Q 004665 595 --------------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEI 627 (738)
Q Consensus 595 --------------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~ 627 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 394 (480)
T cd07559 315 PLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVIT 394 (480)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEe
Confidence 11 233221 12 23 5 2 3678999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhc
Q 004665 628 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 707 (738)
Q Consensus 628 ~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~f 707 (738)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+..||||.|.||+| +++|.+|+++|
T Consensus 395 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~ 470 (480)
T cd07559 395 FKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIG----RETHKMMLDHY 470 (480)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHh
Confidence 99999999999999999999999999999999999999999999987766778999999999986 35799999999
Q ss_pred ceeeEEEEc
Q 004665 708 LTTRWILRG 716 (738)
Q Consensus 708 t~~K~v~~~ 716 (738)
|+.|+++++
T Consensus 471 ~~~k~v~~~ 479 (480)
T cd07559 471 QQTKNILVS 479 (480)
T ss_pred hceEEEEEe
Confidence 999999774
No 22
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=1.5e-73 Score=647.82 Aligned_cols=401 Identities=20% Similarity=0.235 Sum_probs=343.5
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 90 (478)
T cd07086 18 RNPANGEPIARVFPAS------PEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILP- 90 (478)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4567899999999888 889999999999999999999999999999999999999999999998877655421
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..++..+++.++++++..+. .+...+. . ..+...+++|+|+|||++|+|| ||+ ++++++++|
T Consensus 91 ---~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~A 157 (478)
T cd07086 91 ---EG--------LGEVQEMIDICDYAVGLSRMLYGLTIPS-E-RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIA 157 (478)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-C-CCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHH
Confidence 11 23566666666666543322 2222221 1 1233567889999999999997 696 678999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+.+|+++..++++++++|.++ +|+|++|+|++...++++|..||+||+|+||||+++|+.|++.+
T Consensus 158 LaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~ 237 (478)
T cd07086 158 LVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVAR 237 (478)
T ss_pred HHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999 99999999997545888899999999999999999999998876
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 316 (478)
T cd07086 238 RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVY-DEFLERLVKAYKQVRIGDPLDEGT 316 (478)
T ss_pred cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHH-HHHHHHHHHHHHhCCcCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999987532
Q ss_pred --------------------------eee-cCCcc----cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHH
Q 004665 595 --------------------------GLF-GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 635 (738)
Q Consensus 595 --------------------------~~~-g~~~~----~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi 635 (738)
++. |+... .+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 317 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai 396 (478)
T cd07086 317 LVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAI 396 (478)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHH
Confidence 122 33321 13 33 5 2 358999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEecCHHHHHHHHHh--cceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 636 DHIHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 636 ~~aN~~~~GLsa~VfT~d~~~a~~~~~~--l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
+++|+++|||++||||+|.+++++++++ +++|+|+||+++.. .+.+||||.|.||+| +++|.+|+++||+.|+
T Consensus 397 ~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~f~~~k~ 472 (478)
T cd07086 397 AINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRST 472 (478)
T ss_pred HHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceEE
Confidence 9999999999999999999999999999 99999999987544 467899999999986 3568999999999999
Q ss_pred EEEc
Q 004665 713 ILRG 716 (738)
Q Consensus 713 v~~~ 716 (738)
|+++
T Consensus 473 i~~~ 476 (478)
T cd07086 473 CTIN 476 (478)
T ss_pred EEEe
Confidence 9875
No 23
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=1.8e-73 Score=645.45 Aligned_cols=397 Identities=17% Similarity=0.182 Sum_probs=341.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++.+|+||+..
T Consensus 21 ~nP~t~~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 93 (475)
T cd07117 21 YNPANGETLSEITDAT------DADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIR- 93 (475)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHH-
Confidence 4567899999998888 899999999999999999999999999999999999999999999998877655421
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++. ..|+..+++.+++++...+. .++..+. ..+...+++|+|+|||++|+|| ||+ +.+++++||
T Consensus 94 ---~a~-------~~ev~~~i~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 94 ---ETR-------AVDIPLAADHFRYFAGVIRAEEGSANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 221 13677777788877654332 2222111 1233467889999999999998 696 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+.+|+++..+++++++ +||+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQD----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK 236 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHH----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 499999999996 556788888899999999999999999999876
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 315 (475)
T cd07117 237 KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIY-DEFVAKLKEKFENVKVGNPLDPDT 315 (475)
T ss_pred cCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred --------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 316 ~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 395 (475)
T cd07117 316 QMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDE 395 (475)
T ss_pred cccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHH
Confidence 12 233221 12 33 5 2 4688999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.|.||+| +++|.+|+++||+.|++
T Consensus 396 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v 471 (475)
T cd07117 396 VIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIG----RETHKSMLDAYTQMKNI 471 (475)
T ss_pred HHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----CCchHHHHHHHhCeEEE
Confidence 99999999999999999999999999999999999999997766778899999999986 36799999999999998
Q ss_pred EEc
Q 004665 714 LRG 716 (738)
Q Consensus 714 ~~~ 716 (738)
++.
T Consensus 472 ~~~ 474 (475)
T cd07117 472 YID 474 (475)
T ss_pred EEe
Confidence 763
No 24
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=1.6e-73 Score=646.47 Aligned_cols=400 Identities=16% Similarity=0.197 Sum_probs=338.8
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
.++.+|+.++++...+ .+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|.|++.
T Consensus 26 ~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 99 (486)
T cd07140 26 INPTDGSVICKVSLAT------VEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVY 99 (486)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcH
Confidence 4577899999999988 8999999999999998 5999999999999999999999999999999887776542
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccc-cCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 444 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 444 (738)
. ++. ..++...++.+++++.+.+.. +...+... .+.+...+++|+|+|||++|+|| ||. +.++++
T Consensus 100 ~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i 168 (486)
T cd07140 100 T----LAL-------KTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKM 168 (486)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHH
Confidence 1 221 125556666666665443321 22221100 01222457889999999999997 696 578999
Q ss_pred HHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHH
Q 004665 445 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 522 (738)
Q Consensus 445 ~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~ 522 (738)
+|||++||+||+|||+.||+++..+++++.+ + ||+|++|+|+| +.++++.|..||+|++|+||||+.+|+.|++
T Consensus 169 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 244 (486)
T cd07140 169 AACLAAGNTVVLKPAQVTPLTALKFAELTVK----AGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMK 244 (486)
T ss_pred HHHHHhCCEEEEECCccCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5677888889999999999999999999988
Q ss_pred hCC----CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---
Q 004665 523 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 594 (738)
Q Consensus 523 ~a~----~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--- 594 (738)
.|. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 245 ~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~-~~f~~~l~~~~~~l~~g~p 323 (486)
T cd07140 245 SCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIH-DEFVRRVVEEVKKMKIGDP 323 (486)
T ss_pred HHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhCCccCC
Confidence 763 7999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred -------------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeC--C
Q 004665 595 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD--D 630 (738)
Q Consensus 595 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~--~ 630 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+ |
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~ 403 (486)
T cd07140 324 LDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD 403 (486)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCC
Confidence 11 233221 23 33 5 2 468999999999999999998 6
Q ss_pred HHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhccee
Q 004665 631 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 710 (738)
Q Consensus 631 ~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~ 710 (738)
+||||+++|+++|||++||||+|.++++++++++++|.||||+.....+..||||.|.||+| +++|++|+++||+.
T Consensus 404 ~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~ 479 (486)
T cd07140 404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFG----KDLGEEALNEYLKT 479 (486)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhhcE
Confidence 99999999999999999999999999999999999999999997766667899999999986 35799999999999
Q ss_pred eEEEEc
Q 004665 711 RWILRG 716 (738)
Q Consensus 711 K~v~~~ 716 (738)
|+|+++
T Consensus 480 k~v~~~ 485 (486)
T cd07140 480 KTVTIE 485 (486)
T ss_pred EEEEEe
Confidence 999764
No 25
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-73 Score=647.39 Aligned_cols=398 Identities=16% Similarity=0.177 Sum_probs=340.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 27 ~nP~tg~~i~~~~~~~------~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 99 (488)
T PRK13252 27 INPATGEVLATVQAAT------PADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQ- 99 (488)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4567899999999888 899999999999999999999999999999999999999999999999887765431
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++. ..++...++.++++++..+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 100 ---~a~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~A 166 (488)
T PRK13252 100 ---ETS-------VVDIVTGADVLEYYAGLAPALEGEQIPL---RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPA 166 (488)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 221 12455566666666654432 2222211 1234567889999999999998 696 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+.+|.|+.+|++++++ + +|+|+||+|++...+++.|..||+||+|+||||+++|+.|++++
T Consensus 167 LaaGN~Vv~Kps~~~p~t~~~l~~~~~~----aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~ 242 (488)
T PRK13252 167 LAAGNAMIFKPSEVTPLTALKLAEIYTE----AGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA 242 (488)
T ss_pred HhcCCeEEEeCCccCcHHHHHHHHHHHH----cCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 9999999999999999999999999986 7 99999999996445888888999999999999999999999877
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 243 ~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 321 (488)
T PRK13252 243 SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIK-AAFEARLLERVERIRIGDPMDPAT 321 (488)
T ss_pred cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887521
Q ss_pred --------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 322 ~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~e 401 (488)
T PRK13252 322 NFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDE 401 (488)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHH
Confidence 12 233221 12 33 5 2 3689999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.|.||+| +++|.+|+++||+.|+|
T Consensus 402 ai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~i 477 (488)
T PRK13252 402 VIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIG----RENGIATLEHYTQIKSV 477 (488)
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCC----cCChHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999987655667899999999986 35799999999999999
Q ss_pred EEcC
Q 004665 714 LRGN 717 (738)
Q Consensus 714 ~~~~ 717 (738)
++..
T Consensus 478 ~~~~ 481 (488)
T PRK13252 478 QVEM 481 (488)
T ss_pred EEeC
Confidence 8764
No 26
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=3.5e-73 Score=645.04 Aligned_cols=397 Identities=18% Similarity=0.162 Sum_probs=338.0
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++...+ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|.+|+..
T Consensus 20 v~nP~tg~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 93 (479)
T cd07116 20 NITPVTGKVFCEVPRST------AEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPVR 93 (479)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 34577899999998888 899999999999999999999999999999999999999999999998877654421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++. ..++..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||+ +.+++++|
T Consensus 94 ----~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 94 ----ETL-------AADIPLAIDHFRYFAGCIRAQEGSISEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHhHHHcCCeeecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 221 13677778888877754432 2222111 1234567889999999999998 696 45799999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
||++||+||+|||+.||+++..+++++++ +||+|++|+|+| +.+++..|..||+||+|+||||+++|++|++.+
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 235 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGD----LLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----HCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999986 499999999996 566788888899999999999999999998877
Q ss_pred --CCcEEEecCCcCeEEEcCC------CCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-
Q 004665 525 --KIPVLGHADGICHVYVDKS------ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~d------ADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~- 594 (738)
.+|+++|||||||+||++| ||+|.|++.++++.| |+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~-~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G 313 (479)
T cd07116 236 ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIY-DRFMERALERVKAIKQG 313 (479)
T ss_pred cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 3899999999999999998 799999999998765 666 999999999999999 7999999999887521
Q ss_pred ---------------------------------ee-ecCCcc------ccc-c-c-C----CCCCccccCcccceEEEEE
Q 004665 595 ---------------------------------GL-FGGPRA------SKL-L-Q-I----PETRLFHHEYNSMVCTVEI 627 (738)
Q Consensus 595 ---------------------------------~~-~g~~~~------~~~-~-p-v----~~~~i~~eE~FGPVl~v~~ 627 (738)
++ .|+... .++ + | | +++++++||+||||++|++
T Consensus 314 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~ 393 (479)
T cd07116 314 NPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTT 393 (479)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEE
Confidence 12 233221 132 3 5 2 4688999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhc
Q 004665 628 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 707 (738)
Q Consensus 628 ~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~f 707 (738)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.|.||+| +++|.+|+++|
T Consensus 394 ~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~ 469 (479)
T cd07116 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIG----RENHKMMLDHY 469 (479)
T ss_pred eCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHh
Confidence 99999999999999999999999999999999999999999999987766778899999999986 35799999999
Q ss_pred ceeeEEEEc
Q 004665 708 LTTRWILRG 716 (738)
Q Consensus 708 t~~K~v~~~ 716 (738)
|+.|++.++
T Consensus 470 ~~~k~~~~~ 478 (479)
T cd07116 470 QQTKNLLVS 478 (479)
T ss_pred hceEEEEEe
Confidence 999999774
No 27
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=2.9e-73 Score=646.07 Aligned_cols=401 Identities=17% Similarity=0.182 Sum_probs=339.9
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
+.++.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|.++|++++++|+|++.
T Consensus 18 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (481)
T TIGR03216 18 NINPVDGRVIARVHEAG------AAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPR 91 (481)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 34567899999998888 89999999999999997 999999999999999999999999999999988876553
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccc-cCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 444 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 444 (738)
. ++. ..++..+++.++++++..+. .+...+... ...+...+.+|+|+|||++|+|| ||. +.++++
T Consensus 92 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~ 160 (481)
T TIGR03216 92 S----LAS-------HLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKV 160 (481)
T ss_pred H----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHH
Confidence 2 111 12455566666666543321 122111000 01123467889999999999998 696 568999
Q ss_pred HHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CC-hhhHhhhcCCCcCEEEeecCHHHHHHHH
Q 004665 445 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE-EIPDLLKLDDVIDLVIPRGSNKLVSQIK 521 (738)
Q Consensus 445 ~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~-~~~~~l~~~~~vd~V~fTGS~~~g~~i~ 521 (738)
+|||++||+||+|||+.||.|+.++++++.+ + ||+|++|+|+| +. +++++|..||+||+|+||||+.+|+.|+
T Consensus 161 ~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~----aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~ 236 (481)
T TIGR03216 161 GPALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIM 236 (481)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 43 5888899999999999999999999999
Q ss_pred HhC---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---
Q 004665 522 EST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 594 (738)
Q Consensus 522 ~~a---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--- 594 (738)
+++ .+|++||||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 237 ~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p 315 (481)
T TIGR03216 237 KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIF-DRFVAALKARAESLKIGVP 315 (481)
T ss_pred HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 887 38999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred -------------------------------ee-ecCCcc-------ccc-c-c-C-----CCCCccccCcccceEEEEE
Q 004665 595 -------------------------------GL-FGGPRA-------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEI 627 (738)
Q Consensus 595 -------------------------------~~-~g~~~~-------~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~ 627 (738)
++ .|+... .++ + | | ++|++++||+||||++|++
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~ 395 (481)
T TIGR03216 316 DDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAP 395 (481)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEE
Confidence 11 233221 133 3 5 2 4689999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhc
Q 004665 628 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 707 (738)
Q Consensus 628 ~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~f 707 (738)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+| +++|.+|+++|
T Consensus 396 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f 471 (481)
T TIGR03216 396 FDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIG----REGGVHSLEFY 471 (481)
T ss_pred eCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----cCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999987766677899999999986 35799999999
Q ss_pred ceeeEEEEc
Q 004665 708 LTTRWILRG 716 (738)
Q Consensus 708 t~~K~v~~~ 716 (738)
|+.|+|+++
T Consensus 472 ~~~k~v~~~ 480 (481)
T TIGR03216 472 TELTNVCIK 480 (481)
T ss_pred hceEEEEEe
Confidence 999999763
No 28
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=3e-73 Score=645.05 Aligned_cols=395 Identities=18% Similarity=0.200 Sum_probs=338.0
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
.++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|.++|++++++|+||+.
T Consensus 24 ~~P~t~~~i~~v~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 97 (476)
T cd07142 24 IDPRNGEVIAHVAEGD------AEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPY 97 (476)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 4567899999998888 89999999999999975 999999999999999999999999999999988776553
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
. ++. ..++..+++.+++++.+.+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 98 ~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~ 163 (476)
T cd07142 98 E----QAR-------YAEVPLAARLFRYYAGWADKIHGMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVG 163 (476)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeceeeEEEECCCccHHHHHHHHHH
Confidence 2 111 12566666777776654432 2332221 1123457889999999999997 696 4679999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+.||+++.++++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+.+|++|++.
T Consensus 164 ~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~ 239 (476)
T cd07142 164 PALACGNTIVLKPAEQTPLSALLAAKLAAE----AGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQL 239 (476)
T ss_pred HHHHcCCEEEEECCCcccHHHHHHHHHHHH----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55688889999999999999999999999987
Q ss_pred CC----CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----
Q 004665 524 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 594 (738)
Q Consensus 524 a~----~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---- 594 (738)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 240 aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~ 318 (476)
T cd07142 240 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY-DEFVEKAKARALKRVVGDPF 318 (476)
T ss_pred HHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 63 7999999999999999999999999999999999987 999999999999999 7999999998876421
Q ss_pred ------------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 319 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07142 319 RKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDE 398 (476)
T ss_pred CCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHH
Confidence 12 233221 12 33 5 2 3688999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.|.||+| +++|++|+++||+.|++
T Consensus 399 ai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v 474 (476)
T cd07142 399 VIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIG----REKGIYALNNYLQVKAV 474 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHhhheeEE
Confidence 99999999999999999999999999999999999999987777778999999999986 35799999999999998
Q ss_pred E
Q 004665 714 L 714 (738)
Q Consensus 714 ~ 714 (738)
+
T Consensus 475 ~ 475 (476)
T cd07142 475 V 475 (476)
T ss_pred e
Confidence 5
No 29
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=6e-73 Score=640.03 Aligned_cols=395 Identities=16% Similarity=0.169 Sum_probs=336.7
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|+|++..
T Consensus 3 ~p~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (456)
T cd07107 3 NPATGQVLARVPAAS------AADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVS-- 74 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH--
Confidence 456899999998888 899999999999999999999999999999999999999999999998877655421
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 448 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 448 (738)
++ ..++...++.++++++..+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|||
T Consensus 75 --~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 141 (456)
T cd07107 75 --AM--------LGDVMVAAALLDYFAGLVTELKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPL 141 (456)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHH
Confidence 21 23555566666655543321 2222221 1233567889999999999998 696 5679999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 524 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a--- 524 (738)
++||+||+|||+.+|.++.++++++++ +||+|++|+|++ +.++++.|..||++++|+||||+.+|++|++++
T Consensus 142 aaGN~VV~Kps~~~p~~~~~l~~~~~~----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~ 217 (456)
T cd07107 142 AAGNTVVVKPPEQAPLSALRLAELARE----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG 217 (456)
T ss_pred HcCCEEEEeCCCCChHHHHHHHHHHHH----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcC
Confidence 999999999999999999999999986 499999999996 455778888899999999999999999999887
Q ss_pred CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHc-cccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 ~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~-f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+ |.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 296 (456)
T cd07107 218 IKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIY-DEVLARVVERVAAIKVGDPTDPAT 296 (456)
T ss_pred CCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 489999999999999999999999999999995 88877 999999999999999 7999999999886531
Q ss_pred --------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||
T Consensus 297 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~e 376 (456)
T cd07107 297 TMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAE 376 (456)
T ss_pred CcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHH
Confidence 11 233221 13 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||.|+||+| +++|++|+++||+.|+|
T Consensus 377 ai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~v 452 (456)
T cd07107 377 MVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIG----REECLEELLSYTQEKNV 452 (456)
T ss_pred HHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999998877778999999999986 35799999999999999
Q ss_pred EEc
Q 004665 714 LRG 716 (738)
Q Consensus 714 ~~~ 716 (738)
+++
T Consensus 453 ~~~ 455 (456)
T cd07107 453 NVR 455 (456)
T ss_pred EEe
Confidence 764
No 30
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=7.7e-73 Score=638.28 Aligned_cols=401 Identities=19% Similarity=0.204 Sum_probs=332.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
.++.+|+.++++...+ .+|+++++++|++||+. |+.+|.++|.++|++++++|+++.++|++++.+|+|++..
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 77 (455)
T cd07148 4 VNPFDLKPIGEVPTVD------WAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLV 77 (455)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 3567899999999988 89999999999999998 4679999999999999999999999999998877765432
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++.. ++......+.++++.++.+.+...+.+. . ....+...+++|+|+|||++|+|| ||. +.++++++|
T Consensus 78 ----~a~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 148 (455)
T cd07148 78 ----DAKV-EVTRAIDGVELAADELGQLGGREIPMGL-T---PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPA 148 (455)
T ss_pred ----HHHH-HHHHHHHHHHHHHHHHHHhcCccccccc-c---cCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHH
Confidence 2211 1222223344444444333211000000 0 001234567889999999999998 685 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+.||+++.++++++++ + ||+|++|+|+++.+.++.|..||+||+|+||||+.+|+.|++++
T Consensus 149 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~ 224 (455)
T cd07148 149 IAAGCPVIVKPALATPLSCLAFVDLLHE----AGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP 224 (455)
T ss_pred HHcCCEEEeeCCCcccHHHHHHHHHHHH----cCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc
Confidence 9999999999999999999999999987 7 99999999996556788888899999999999999999998876
Q ss_pred CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---------
Q 004665 525 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 594 (738)
Q Consensus 525 ~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 225 ~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~ 303 (455)
T cd07148 225 GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA-DDFAQRLAAAAEKLVVGDPTDPDTE 303 (455)
T ss_pred CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHH-HHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred -------------------------ee-ecCCcccc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHc
Q 004665 595 -------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 640 (738)
Q Consensus 595 -------------------------~~-~g~~~~~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~ 640 (738)
++ .|+....+ ++ | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 304 ~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~ 383 (455)
T cd07148 304 VGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANS 383 (455)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhC
Confidence 11 13322222 22 5 2 36889999999999999999999999999999
Q ss_pred CCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC-CCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 641 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 641 ~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
++|||++||||+|.+++.++++++++|+|+||+++... +..||||.|.||+| +++|++|+++||+.|++.+
T Consensus 384 ~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 384 LPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG----TGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred CCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccC----CCchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999876443 46799999999986 3579999999999999853
No 31
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=6.7e-73 Score=640.80 Aligned_cols=386 Identities=18% Similarity=0.202 Sum_probs=330.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
.+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++
T Consensus 6 ~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~----ea~~~Ev~~~~~~i~~~~~ 81 (493)
T PTZ00381 6 PEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPF----ETKMTEVLLTVAEIEHLLK 81 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999987642 3433455666778889998
Q ss_pred HHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHH
Q 004665 393 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 470 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~ 470 (738)
.++.|++... ... +... .....+++|+|+|||++|+|| ||. ++++++++||+|||+||+||||.||.|+.+++
T Consensus 82 ~~~~~~~~~~-~~~--~~~~--~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~ 156 (493)
T PTZ00381 82 HLDEYLKPEK-VDT--VGVF--GPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMA 156 (493)
T ss_pred HHHHHhCCcc-cCC--cccc--CCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH
Confidence 8888865321 111 1001 112467899999999999998 695 67899999999999999999999999999999
Q ss_pred HHHHhhCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHH
Q 004665 471 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 547 (738)
Q Consensus 471 ~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld 547 (738)
+++++ +||+|++++|+|+.+.+..|..|| +|+|+||||+.+|++|+++| .+|+++|||||||+||++|||++
T Consensus 157 ~ll~~----~lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~ 231 (493)
T PTZ00381 157 KLLTK----YLDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLK 231 (493)
T ss_pred HHHHH----hCCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHH
Confidence 99986 599999999997655666666676 99999999999999999877 39999999999999999999999
Q ss_pred HHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc------------------------------e-
Q 004665 548 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G- 595 (738)
Q Consensus 548 ~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------------------------------~- 595 (738)
.|++.+++++|.|+| +|+|++|+|||++++ |+|+++|++.++++.. +
T Consensus 232 ~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~~ 310 (493)
T PTZ00381 232 VAARRIAWGKFLNAGQTCVAPDYVLVHRSIK-DKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGKV 310 (493)
T ss_pred HHHHHHHHHHHhhcCCcCCCCCEEEEeHHHH-HHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCcE
Confidence 999999999999988 999999999999999 7999999998886510 0
Q ss_pred eecCCcc-cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcce
Q 004665 596 LFGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 666 (738)
Q Consensus 596 ~~g~~~~-~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~ 666 (738)
+.|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 311 ~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~s 390 (493)
T PTZ00381 311 VYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSS 390 (493)
T ss_pred EECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 1233211 12 33 5 2 3689999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEECCCCC--CCCCCcccCccccccccccccccchhHHhhcceeeEEEEcC
Q 004665 667 AAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 717 (738)
Q Consensus 667 G~V~iN~~~~--~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~ 717 (738)
|+|+||++.. ..+.+||||.|.||+| +++|.+|+++||+.|+|+.+.
T Consensus 391 G~v~IN~~~~~~~~~~~PFGG~g~SG~G----~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 391 GAVVINDCVFHLLNPNLPFGGVGNSGMG----AYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred ceEEECCccccccCCCCCCCCcCccccc----ccchHHHHHhccceeEEEEcc
Confidence 9999998753 3467899999999986 367999999999999998774
No 32
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=5.9e-73 Score=638.40 Aligned_cols=391 Identities=16% Similarity=0.178 Sum_probs=335.7
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|.|++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (448)
T TIGR01780 3 NPATGEIIGTVPDQG------VEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLK-- 74 (448)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 467899999998888 899999999999999999999999999999999999999999999998877655432
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChHH-HHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAI 448 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~AL 448 (738)
++ ..|+..+++.+++++...+. .+...+.. ..+...+.+++|+|||++|+|| ||.+ .+++++|||
T Consensus 75 --~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 142 (448)
T TIGR01780 75 --EA--------KGEILYAASFLEWFAEEAKRVYGDTIPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAAL 142 (448)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHH
Confidence 11 23667777777766643322 23222211 1234556789999999999997 6964 579999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCC--ChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSR--EEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~--~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++. .++++.|..||+||+|+||||+.+|++|++.+
T Consensus 143 aaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa 218 (448)
T TIGR01780 143 AAGCTVVVKPAEQTPLSALALARLAEQ----AGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSA 218 (448)
T ss_pred HcCCeEeeECCccchHHHHHHHHHHHH----cCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999986 7 999999999964 56788888999999999999999999999877
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 297 (448)
T TIGR01780 219 STVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIY-DEFAKKLAEAVKKLKVGNGLDEG 297 (448)
T ss_pred hcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred ---------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHH
Q 004665 595 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 636 (738)
Q Consensus 595 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~ 636 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 298 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 377 (448)
T TIGR01780 298 VTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIA 377 (448)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 11 233221 13 33 5 2 4689999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceee
Q 004665 637 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 637 ~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
++|+++|||++||||+|.++++++++++++|.||||++....+..||||.|.||+| +++|++|+++||+.|
T Consensus 378 ~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 378 IANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLG----REGSKYGIEEYLETK 448 (448)
T ss_pred HHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhccC
Confidence 99999999999999999999999999999999999998766667899999999986 357999999999876
No 33
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=1.5e-72 Score=635.25 Aligned_cols=392 Identities=18% Similarity=0.182 Sum_probs=339.5
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|+|++..
T Consensus 3 ~P~tg~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (446)
T cd07106 3 NPATGEVFASAPVAS------EAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLA-- 74 (446)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 467899999998888 899999999999999999999999999999999999999999999998776654421
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 449 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 449 (738)
+ +..|+..+++.++++++...+ +...+. ..+...+.+++|+|||++|+|| ||. +.+++++|||+
T Consensus 75 --~--------a~~ev~~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALa 140 (446)
T cd07106 75 --E--------AQFEVGGAVAWLRYTASLDLP-DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALL 140 (446)
T ss_pred --H--------HHHHHHHHHHHHHHHHhhhhc-CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 1 124677788888887754422 111111 1234568889999999999998 586 56899999999
Q ss_pred hCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC---C
Q 004665 450 SGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---I 526 (738)
Q Consensus 450 aGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~---~ 526 (738)
+||+||+|||+++|+|+.++++++++ ++|+|++|+|+++.+++..|..||++|+|+||||+.+|+.|++++. +
T Consensus 141 aGN~VilKps~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~ 216 (446)
T cd07106 141 AGNTVVLKPSPFTPLCTLKLGELAQE----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLK 216 (446)
T ss_pred cCCEEEEECCccchHHHHHHHHHHHH----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999986 4999999999975567888889999999999999999999998773 8
Q ss_pred cEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----------
Q 004665 527 PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------- 594 (738)
Q Consensus 527 p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----------- 594 (738)
|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 217 ~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~G~p~~~~~~~g 295 (446)
T cd07106 217 RVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIY-DEFCEALVALAKAAVVGDGLDPGTTLG 295 (446)
T ss_pred eeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccH-HHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred -----------------------ee-ecCCcc--ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHc
Q 004665 595 -----------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 640 (738)
Q Consensus 595 -----------------------~~-~g~~~~--~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~ 640 (738)
++ .|+... .++ + | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 296 pli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~ 375 (446)
T cd07106 296 PVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARAND 375 (446)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhC
Confidence 11 233221 133 3 5 2 36889999999999999999999999999999
Q ss_pred CCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 641 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 641 ~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
++|||++||||+|.+++.++++++++|+|+||++....+..||||.|+||+| +++|++|+++||+.|+|.
T Consensus 376 ~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 376 SEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIG----VEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999998877788999999999986 357999999999999985
No 34
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=1.6e-72 Score=639.78 Aligned_cols=400 Identities=18% Similarity=0.186 Sum_probs=339.1
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.|++..
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ 93 (478)
T cd07085 20 VYNPATGEVIARVPLAT------AEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLA 93 (478)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 34567899999999888 899999999999999999999999999999999999999999999998877765532
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++ ..|+...++.+++++...+. .++..+.. ..+...+.+++|+|||++|+|| ||. +..++++|
T Consensus 94 ----~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 159 (478)
T cd07085 94 ----DA--------RGDVLRGLEVVEFACSIPHLLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPM 159 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHH
Confidence 21 23566666666665543321 23222110 1234567899999999999997 596 56899999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 525 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~ 525 (738)
||++||+||+|||+.+|+++..|++++++ + +|+|++|+|+++.+.+..|..||+||+|+||||+.+|+.|++++.
T Consensus 160 ALaaGN~VvlKps~~tp~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (478)
T cd07085 160 AIACGNTFVLKPSERVPGAAMRLAELLQE----AGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235 (478)
T ss_pred HHhcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999986 7 999999999975566777888999999999999999999988773
Q ss_pred ---CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 526 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 526 ---~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~~ 314 (478)
T cd07085 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEA-DEWIPKLVERAKKLKVGAGDDPG 314 (478)
T ss_pred hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ---------------------------ee-ecCCc------cccc-c-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 ---------------------------GL-FGGPR------ASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 ---------------------------~~-~g~~~------~~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+.. ..++ + | | +++++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 394 (478)
T cd07085 315 ADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLD 394 (478)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHH
Confidence 22 23321 1233 3 6 3 368999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC-CCCcccCccccccccccccccchhHHhhcceee
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
|||+++|+++|||++||||+|.++++++++++++|+|+||++.... +.+||||.|.||+| +++++|++|+++||+.|
T Consensus 395 eai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~~~g~~~~~~~~~~k 472 (478)
T cd07085 395 EAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFG--DLHFYGKDGVRFYTQTK 472 (478)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCC--CCcCChHHHHHHhcceE
Confidence 9999999999999999999999999999999999999999875443 56899999999986 22357999999999999
Q ss_pred EEEEc
Q 004665 712 WILRG 716 (738)
Q Consensus 712 ~v~~~ 716 (738)
+|+++
T Consensus 473 ~v~~~ 477 (478)
T cd07085 473 TVTSR 477 (478)
T ss_pred EEEEe
Confidence 99764
No 35
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=1.6e-72 Score=641.46 Aligned_cols=396 Identities=20% Similarity=0.209 Sum_probs=338.5
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|++..
T Consensus 21 ~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 93 (488)
T TIGR02299 21 LSPATNEVLGSVARGG------AADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLR- 93 (488)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH-
Confidence 4567899999998888 889999999999999999999999999999999999999999999999887765432
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccc--cccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEE--PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++ ..++..+++.++++++..+ ..+...+. .....+++++|+|||++|+|| ||. +.+++++|
T Consensus 94 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 158 (488)
T TIGR02299 94 ---QT--------RQQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAP 158 (488)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHHH
Confidence 21 1345556666666554332 11222211 123457889999999999998 696 56799999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+|||+.+|.++.++++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.+
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 234 (488)
T TIGR02299 159 ALAFGNTVVLKPAEWSPLTAARLAEIAKE----AGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNG 234 (488)
T ss_pred HHHcCCEEEEECchhchHHHHHHHHHHHH----cCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 556777788899999999999999999999876
Q ss_pred ---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc------
Q 004665 525 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 594 (738)
Q Consensus 525 ---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------ 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 235 a~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~l~~g~p~~~ 313 (488)
T TIGR02299 235 ADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA-EDFVEKLVERVRAIRVGHPLDP 313 (488)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHhhCCcCCCCCC
Confidence 49999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ----------------------------ee-ecCCcc---------cc-cc-c-C-----CCCCccccCcccceEEEEEe
Q 004665 595 ----------------------------GL-FGGPRA---------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIV 628 (738)
Q Consensus 595 ----------------------------~~-~g~~~~---------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~ 628 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~ 393 (488)
T TIGR02299 314 ETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPF 393 (488)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEee
Confidence 12 233221 12 33 5 2 36889999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcc
Q 004665 629 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 708 (738)
Q Consensus 629 ~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft 708 (738)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+| +++|++|+++||
T Consensus 394 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~ 469 (488)
T TIGR02299 394 KDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIG----REGGTYSFDFYT 469 (488)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHHh
Confidence 9999999999999999999999999999999999999999999987766667899999999986 357999999999
Q ss_pred eeeEEEEcC
Q 004665 709 TTRWILRGN 717 (738)
Q Consensus 709 ~~K~v~~~~ 717 (738)
+.|+|+++.
T Consensus 470 ~~k~i~~~~ 478 (488)
T TIGR02299 470 ETKNVALAL 478 (488)
T ss_pred ceEEEEEec
Confidence 999998865
No 36
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-72 Score=640.14 Aligned_cols=400 Identities=15% Similarity=0.170 Sum_probs=341.2
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|+|++..
T Consensus 21 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 94 (475)
T PRK13473 21 VYNPATGEVLAEIAEAS------AAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLH 94 (475)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 44577899999999988 899999999999999999999999999999999999999999999998877655421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++. ..++..+++.+++++...+.. +...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 95 ----~a~-------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ 161 (475)
T PRK13473 95 ----LAL-------NDEIPAIVDVFRFFAGAARCLEGKAAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAP 161 (475)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHHHHH
Confidence 111 125666777777766443322 2111110 1233457889999999999998 686 56799999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
||++||+||+|||+.+|+++.++++++.+ +||+|++|+|++ +.+++..|..||+||+|+||||+++|+.|++++
T Consensus 162 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa 237 (475)
T PRK13473 162 ALAAGNTVVLKPSEITPLTALKLAELAAD----ILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA 237 (475)
T ss_pred HHhcCCEEEEECCCCChHHHHHHHHHHHH----hCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999987 499999999996 667888888899999999999999999999877
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||++|| |+|+++|+++++++.+
T Consensus 238 ~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 316 (475)
T PRK13473 238 DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY-DDLVAKLAAAVATLKVGDPDDED 316 (475)
T ss_pred hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ----------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHH
Q 004665 595 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 635 (738)
Q Consensus 595 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi 635 (738)
++ .|+... .+ ++ | | +++.+++||+||||++|++|+|+||||
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 396 (475)
T PRK13473 317 TELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAV 396 (475)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHH
Confidence 11 133222 23 33 5 2 368999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 636 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 636 ~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.|.||+| +++|++|+++||+.|++++
T Consensus 397 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~t~~k~i~~ 472 (475)
T PRK13473 397 RWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYG----KDMSLYGLEDYTVVRHVMV 472 (475)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceEEEEE
Confidence 999999999999999999999999999999999999998766677899999999986 3679999999999999987
Q ss_pred cC
Q 004665 716 GN 717 (738)
Q Consensus 716 ~~ 717 (738)
++
T Consensus 473 ~~ 474 (475)
T PRK13473 473 KH 474 (475)
T ss_pred ec
Confidence 54
No 37
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=2e-72 Score=636.21 Aligned_cols=397 Identities=16% Similarity=0.174 Sum_probs=342.4
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++|.++|++++++|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (457)
T cd07090 3 EPATGEVLATVHCAG------AEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIE-- 74 (457)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 467889999998888 899999999999999999999999999999999999999999999999888765431
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 448 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 448 (738)
++ ..++..+++.++++++..+. .++..+. ..+...+++++|+|||++|+|| ||. +.+++++|||
T Consensus 75 --~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~AL 141 (457)
T cd07090 75 --EA--------RVDIDSSADCLEYYAGLAPTLSGEHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPAL 141 (457)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhCCeeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 22 23566777777777654433 2222211 1244567899999999999997 696 5689999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC--
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 525 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-- 525 (738)
++||+||+|||+++|.|+.++++++.+ + ||+|++|+|+++.++++.|..||+||+|+||||+.+|++|++++.
T Consensus 142 aaGN~Vv~Kps~~~~~~~~~l~~~~~~----aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~ 217 (457)
T cd07090 142 ACGNAMVYKPSPFTPLTALLLAEILTE----AGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKG 217 (457)
T ss_pred hcCCeeeecCCCcCcHHHHHHHHHHHH----cCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999986 7 999999999965567788889999999999999999999998873
Q ss_pred -CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---------
Q 004665 526 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 594 (738)
Q Consensus 526 -~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--------- 594 (738)
+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++..
T Consensus 218 ~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~ 296 (457)
T cd07090 218 IKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIK-DEFTERLVERTKKIRIGDPLDEDTQ 296 (457)
T ss_pred CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999999987531
Q ss_pred -------------------------ee-ecCCcc-------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 -------------------------GL-FGGPRA-------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 -------------------------~~-~g~~~~-------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||
T Consensus 297 ~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~de 376 (457)
T cd07090 297 MGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEE 376 (457)
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHH
Confidence 11 233221 12 33 5 2 3689999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.|.||+| +++|++|+++||+.|++
T Consensus 377 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~f~~~k~~ 452 (457)
T cd07090 377 VIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFG----RENGTAALEHYTQLKTV 452 (457)
T ss_pred HHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhCeEEE
Confidence 99999999999999999999999999999999999999997766677899999999986 35799999999999999
Q ss_pred EEcCc
Q 004665 714 LRGNG 718 (738)
Q Consensus 714 ~~~~~ 718 (738)
++.++
T Consensus 453 ~~~~~ 457 (457)
T cd07090 453 YVEMG 457 (457)
T ss_pred EEeCC
Confidence 87543
No 38
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=1.6e-72 Score=640.48 Aligned_cols=400 Identities=18% Similarity=0.187 Sum_probs=339.5
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-----RRLQALQSQDRRKILLDVADALEANESLIKVENEADVA 365 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~ 365 (738)
.++.+|+.++++...+ .+|+++|+++|++|| +.|+++|..+|.++|++++++|++|+++|++++++|+|
T Consensus 28 ~~P~t~~~i~~~~~~~------~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 101 (503)
T PLN02467 28 VNPATEETIGDIPAAT------AEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCG 101 (503)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 4567899999998888 899999999999999 89999999999999999999999999999999988776
Q ss_pred HHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccC-CCceEEEEeeeeeeEEEEeCC-ChH-HHH
Q 004665 366 AAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELA-DGLILEKTSCPLGVLLIVFES-RPD-ALV 441 (738)
Q Consensus 366 ~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~PlGVV~~I~p~-~P~-~~~ 441 (738)
|+.. ++ ..|+..+++.+++++...+.. +......... .+...+++|+|+|||++|+|| ||. +.+
T Consensus 102 k~~~----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 169 (503)
T PLN02467 102 KPLD----EA--------AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMAT 169 (503)
T ss_pred CCHH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHH
Confidence 5532 22 135666666666665433221 2211000001 123467899999999999998 586 568
Q ss_pred HHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHH
Q 004665 442 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 519 (738)
Q Consensus 442 ~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~ 519 (738)
++++|||++||+||+|||+.||+++..+++++++ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.
T Consensus 170 ~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~e----ag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 245 (503)
T PLN02467 170 WKVAPALAAGCTAVLKPSELASVTCLELADICRE----VGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRK 245 (503)
T ss_pred HHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHH----cCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999986 7 99999999996 5567888889999999999999999999
Q ss_pred HHHhC---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-
Q 004665 520 IKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 594 (738)
Q Consensus 520 i~~~a---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~- 594 (738)
|++.+ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 246 v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g 324 (503)
T PLN02467 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA-SEFLEKLVKWAKNIKIS 324 (503)
T ss_pred HHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 99877 38999999999999999999999999999999999988 999999999999999 7999999999887521
Q ss_pred ---------------------------------ee-ecCCcc----cc-cc-c-C-----CCCCccccCcccceEEEEEe
Q 004665 595 ---------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIV 628 (738)
Q Consensus 595 ---------------------------------~~-~g~~~~----~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~ 628 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|
T Consensus 325 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 325 DPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 11 233221 13 23 5 2 36889999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcc
Q 004665 629 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 708 (738)
Q Consensus 629 ~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft 708 (738)
+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.+......||||.|.||+| +++|++|+++||
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft 480 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFG----RELGEWGLENYL 480 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999987765667899999999886 367999999999
Q ss_pred eeeEEEEcC
Q 004665 709 TTRWILRGN 717 (738)
Q Consensus 709 ~~K~v~~~~ 717 (738)
+.|++.+..
T Consensus 481 ~~k~i~~~~ 489 (503)
T PLN02467 481 SVKQVTKYI 489 (503)
T ss_pred CeEEEEEec
Confidence 999998853
No 39
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=3.7e-72 Score=634.74 Aligned_cols=397 Identities=19% Similarity=0.222 Sum_probs=337.7
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 15 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 87 (465)
T cd07151 15 LNPYTGETLAEIPAAS------KEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRI- 87 (465)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3467899999998888 899999999999999999999999999999999999999999999999877765532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..|+..+++.+++++...+.. +...+.. ..+...+++|+|+|||++|+|| ||+ +.+++++||
T Consensus 88 ---~a--------~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 154 (465)
T cd07151 88 ---KA--------NIEWGAAMAITREAATFPLRMEGRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPA 154 (465)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 21 235666777777766544332 2222211 1244567889999999999997 695 567999999
Q ss_pred HHhCCEEEEeCCcccHHHH-HHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 448 IRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~-~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
|++||+||+|||+.+|.++ .++.+++.+ + +|+|++|+|+| +.+++..|..||.+|+|+||||+.+|+.|++.+
T Consensus 155 LaaGN~Vi~Kps~~~p~~~~~~l~~~l~~----aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 230 (465)
T cd07151 155 LALGNAVVLKPASDTPITGGLLLAKIFEE----AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELA 230 (465)
T ss_pred HHcCCEEEEECCCCCcHhHHHHHHHHHHH----cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999996 688888886 7 99999999996 556788888899999999999999999998876
Q ss_pred ---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc------
Q 004665 525 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 594 (738)
Q Consensus 525 ---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------ 594 (738)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 231 a~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 309 (465)
T cd07151 231 GRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY-DEFVEKFVERVKALPYGDPSDP 309 (465)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ----------------------------ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHH
Q 004665 595 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 638 (738)
Q Consensus 595 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~a 638 (738)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 310 ~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 389 (465)
T cd07151 310 DTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELA 389 (465)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHH
Confidence 11 1222111133 5 2 368999999999999999999999999999
Q ss_pred HcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEEEc
Q 004665 639 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 639 N~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~ 716 (738)
|+++|||++||||+|.++++++++++++|+|+||+.+.. .+.+||||.+.||+| +++|++|+++||+.|++++.
T Consensus 390 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 390 NDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG----RFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC----cCChHHHHHHhhceEEEEec
Confidence 999999999999999999999999999999999987654 357899999999886 35799999999999999764
No 40
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=3.9e-72 Score=635.47 Aligned_cols=397 Identities=16% Similarity=0.157 Sum_probs=340.7
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH-HHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR-RLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
.++.+|+.++++...+ .+|+++|+++|++||+ .|+ ++|.++|.++|+++++.|++|+++|++++++|+|++.
T Consensus 27 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 100 (481)
T cd07143 27 YNPSTGKLITKIAEAT------EADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTF 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Confidence 3467899999999888 8999999999999998 599 9999999999999999999999999999988776553
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChHH-HHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIAS 445 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~ 445 (738)
. +. ...|+..+++.+++++++.+.. +...+. ..+...+++++|+|||++|+|| ||.. .+++++
T Consensus 101 ~----~~-------~~~ev~~~~~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 166 (481)
T cd07143 101 G----TA-------KRVDVQASADTFRYYGGWADKIHGQVIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIA 166 (481)
T ss_pred H----HH-------HHHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHH
Confidence 1 11 1235677777777777655432 332221 1234567889999999999998 6964 589999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+++|+++..+++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 167 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~ 242 (481)
T cd07143 167 PALAAGNTIVLKPSELTPLSALYMTKLIPE----AGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242 (481)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHh----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 45678888999999999999999999999886
Q ss_pred CC----CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----
Q 004665 524 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 594 (738)
Q Consensus 524 a~----~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---- 594 (738)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 243 aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~ 321 (481)
T cd07143 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY-DKFVKRFKEKAKKLKVGDPF 321 (481)
T ss_pred HHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCC
Confidence 63 6999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ------------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 322 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 401 (481)
T cd07143 322 AEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEE 401 (481)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHH
Confidence 11 133221 12 23 5 2 3688999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.|.||+| +++|++|+++||+.|+|
T Consensus 402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~~k~i 477 (481)
T cd07143 402 AIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIG----RELGEYALENYTQIKAV 477 (481)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccC----cccHHHHHHHHhCeEEE
Confidence 99999999999999999999999999999999999999998777778899999999886 36799999999999999
Q ss_pred EEc
Q 004665 714 LRG 716 (738)
Q Consensus 714 ~~~ 716 (738)
+++
T Consensus 478 ~~~ 480 (481)
T cd07143 478 HIN 480 (481)
T ss_pred EEe
Confidence 763
No 41
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=6.6e-72 Score=629.60 Aligned_cols=390 Identities=19% Similarity=0.224 Sum_probs=332.5
Q ss_pred CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhh
Q 004665 296 GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKS 375 (738)
Q Consensus 296 g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~ 375 (738)
|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++.. ++
T Consensus 1 ~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a 70 (443)
T cd07152 1 GAVLGEVGVAD------AADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRP----KA 70 (443)
T ss_pred CCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH----HH
Confidence 35678888878 899999999999999999999999999999999999999999999999887765421 11
Q ss_pred HHHHhhccHHHHHHHHHHHHHHhhccc-cccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCC
Q 004665 376 LVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGN 452 (738)
Q Consensus 376 ~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN 452 (738)
..|+..+++.+++++...+ ..+...+. ..+...+.+|+|+|||++|+|| ||. +.+++++|||++||
T Consensus 71 --------~~ev~~~i~~l~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN 139 (443)
T cd07152 71 --------GFEVGAAIGELHEAAGLPTQPQGEILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGN 139 (443)
T ss_pred --------HHHHHHHHHHHHHHHHhHHHhCCccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCC
Confidence 2367777777777765432 33332221 1344567889999999999998 696 56899999999999
Q ss_pred EEEEeCCcccHHHH-HHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCc
Q 004665 453 GLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIP 527 (738)
Q Consensus 453 tVVlKpse~tp~t~-~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p 527 (738)
+||+|||+++|.++ .++++++.+ + +|+|++|+|+|+.+++..|..||++|+|+||||+.+|++|++++ .+|
T Consensus 140 ~VvlKps~~~p~~~~~~l~~~~~~----ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 215 (443)
T cd07152 140 AVVLKPDPRTPVSGGVVIARLFEE----AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKK 215 (443)
T ss_pred EEEEECCcccchhHHHHHHHHHHH----hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCc
Confidence 99999999999996 788899986 7 99999999997556788888899999999999999999998876 389
Q ss_pred EEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc------------
Q 004665 528 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------ 594 (738)
Q Consensus 528 ~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------------ 594 (738)
+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 216 ~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gp 294 (443)
T cd07152 216 VSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVA-DAYTAKLAAKAKHLPVGDPATGQVALGP 294 (443)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ----------------------ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCC
Q 004665 595 ----------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSA 644 (738)
Q Consensus 595 ----------------------~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~G 644 (738)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 295 li~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 374 (443)
T cd07152 295 LINARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYG 374 (443)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCcc
Confidence 01 1221111133 5 2 468999999999999999999999999999999999
Q ss_pred cEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC-CCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 645 HTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 645 Lsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
|++||||+|.++++++++++++|.|+||+++... +.+||||.|.||+|. +++|++|+++||+.|++.
T Consensus 375 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~---~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 375 LSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGS---RFGGPANWEEFTQWQWVT 442 (443)
T ss_pred ceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCC---ccCcHHHHHHhhceeEEe
Confidence 9999999999999999999999999999876554 568999999998862 346899999999999985
No 42
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=5.7e-72 Score=636.22 Aligned_cols=397 Identities=17% Similarity=0.225 Sum_probs=339.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
.++.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 28 ~~P~tg~~i~~~~~~~------~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 101 (484)
T cd07144 28 VNPSTGEVIASVYAAG------EEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYH 101 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH
Confidence 3467899999999888 88999999999999996 8899999999999999999999999999998877655421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
+.. ..++..+++.+++++++.+.. +...+. ..+...+.+|+|+|||++|+|| ||. +++++++|
T Consensus 102 ----~~~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ 167 (484)
T cd07144 102 ----SNA-------LGDLDEIIAVIRYYAGWADKIQGKTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAP 167 (484)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHH
Confidence 110 235666677777766544322 322221 1234467889999999999997 696 46899999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+|||+.+|+++..+.+++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|++|++.+
T Consensus 168 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 243 (484)
T cd07144 168 ALAAGNTVVIKPAENTPLSLLYFANLVKE----AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243 (484)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHH----hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 566888888999999999999999999999876
Q ss_pred ---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHh-cC------
Q 004665 525 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EG------ 593 (738)
Q Consensus 525 ---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~-~~------ 593 (738)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|++++++ ++
T Consensus 244 ~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~G~p~~ 322 (484)
T cd07144 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIY-DKFVEKFVEHVKQNYKVGSPFD 322 (484)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhhCCcCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999874 32
Q ss_pred ----------------------------cee-ecCCcc-----ccc-c-c-C-----CCCCccccCcccceEEEEEeCCH
Q 004665 594 ----------------------------VGL-FGGPRA-----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 631 (738)
Q Consensus 594 ----------------------------~~~-~g~~~~-----~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~ 631 (738)
.++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 402 (484)
T cd07144 323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTY 402 (484)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCH
Confidence 122 243321 133 3 5 2 36899999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceee
Q 004665 632 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 632 dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.|.||+| +++|++|+++||+.|
T Consensus 403 ~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k 478 (484)
T cd07144 403 EEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIG----RELGEYGLETYTQTK 478 (484)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCC----CCchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999998766677899999999986 357999999999999
Q ss_pred EEEEc
Q 004665 712 WILRG 716 (738)
Q Consensus 712 ~v~~~ 716 (738)
+|.++
T Consensus 479 ~v~~~ 483 (484)
T cd07144 479 AVHIN 483 (484)
T ss_pred EEEEe
Confidence 99764
No 43
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=8.8e-72 Score=630.79 Aligned_cols=394 Identities=18% Similarity=0.220 Sum_probs=334.6
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|+|++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (456)
T cd07110 3 NPATEATIGEIPAAT------AEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLD-- 74 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 457899999998888 899999999999999999999999999999999999999999999999887765432
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhccccc----cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI----GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
++. .++..+++.++++++..+.. +...+. ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 75 --~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 142 (456)
T cd07110 75 --EAA--------WDVDDVAGCFEYYADLAEQLDAKAERAVPL--PSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVA 142 (456)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhhccCCccccC--CCCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 221 24445555555544332211 111111 01244567889999999999997 696 5678999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
+||++||+||+|||+.||+++..+++++++ + +|+|++|+|++ +.+.++.|..||++|+|+||||+.+|++|+++
T Consensus 143 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~ 218 (456)
T cd07110 143 PALAAGCTVVLKPSELTSLTELELAEIAAE----AGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQA 218 (456)
T ss_pred HHHHcCCEEEEECcccchHHHHHHHHHHHH----cCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55678888899999999999999999999987
Q ss_pred CC---CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----
Q 004665 524 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 594 (738)
Q Consensus 524 a~---~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----- 594 (738)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 297 (456)
T cd07110 219 AAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIA-DAFLERLATAAEAIRVGDPLE 297 (456)
T ss_pred HhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 73 8999999999999999999999999999999999988 999999999999999 7999999999876521
Q ss_pred -----------------------------ee-ecCCcc----ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 -----------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 -----------------------------~~-~g~~~~----~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+|
T Consensus 298 ~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 377 (456)
T cd07110 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATED 377 (456)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHH
Confidence 11 233321 233 3 5 2 357899999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.|.||+| +++|++|+++||+.|+
T Consensus 378 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~ 453 (456)
T cd07110 378 EAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIG----RELGEWGLDNYLEVKQ 453 (456)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHhcceeE
Confidence 999999999999999999999999999999999999999987766677899999999886 3579999999999999
Q ss_pred EE
Q 004665 713 IL 714 (738)
Q Consensus 713 v~ 714 (738)
|+
T Consensus 454 i~ 455 (456)
T cd07110 454 IT 455 (456)
T ss_pred Ee
Confidence 85
No 44
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=1e-71 Score=628.58 Aligned_cols=387 Identities=20% Similarity=0.214 Sum_probs=324.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
.+||++|+++|++||+.|+.+|..+|.++|++++++|++|+++|++++++|+||+.. ++...++..+...++++++
T Consensus 5 ~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 5 GETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRV----EAYRDEVGVLTKSANLALS 80 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999988876632 3322234444455566666
Q ss_pred HHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHH
Q 004665 393 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 470 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~ 470 (738)
.++.+.+... + ..+.. ..+...++.|+|+|||++|+|| ||+ +.++++++||++||+||+|||+.||+++.+++
T Consensus 81 ~~~~~~~~~~--~-~~~~~--~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~ 155 (484)
T PLN02203 81 NLKKWMAPKK--A-KLPLV--AFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA 155 (484)
T ss_pred HHHHHhcccc--c-cCCcc--cCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHH
Confidence 5555543110 0 11110 1133567899999999999998 596 56799999999999999999999999999999
Q ss_pred HHHHhhCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcC---CC
Q 004665 471 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDK---SA 544 (738)
Q Consensus 471 ~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~---dA 544 (738)
+++++ +||+|++|+|+|+.+++..|..|+ +|+|+||||+++|+.|++.| .+|+++|||||||+||++ ||
T Consensus 156 ~~~~~----~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~da 230 (484)
T PLN02203 156 ANIPK----YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSR 230 (484)
T ss_pred HHHHH----hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCC
Confidence 99986 599999999998667888888885 99999999999999999887 499999999999999997 69
Q ss_pred CHHHHHHHHHHHccc-cCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----------------------------
Q 004665 545 NLDVAKNIVIDAKID-YPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------- 594 (738)
Q Consensus 545 Dld~Aa~~iv~~~f~-n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---------------------------- 594 (738)
|+|.|++.+++|+|. |+| +|+|++|+|||+++| |+|+++|+++++++..
T Consensus 231 Dl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a 309 (484)
T PLN02203 231 DTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFA-PILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDP 309 (484)
T ss_pred CHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999995 777 999999999999999 7999999998876521
Q ss_pred ----e-eecCCcc-ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHH
Q 004665 595 ----G-LFGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 660 (738)
Q Consensus 595 ----~-~~g~~~~-~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~ 660 (738)
. +.|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 310 ~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 310 RVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred HhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 1 1233221 233 3 5 2 3689999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeEEEECCCCC--CCCCCcccCccccccccccccccchhHHhhcceeeEEEEcCc
Q 004665 661 LCQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 718 (738)
Q Consensus 661 ~~~l~~G~V~iN~~~~--~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~~ 718 (738)
++++++|.|+||++.. ..+.+||||.|.||+| +++|++|+++||+.|+|+++..
T Consensus 390 ~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~G----r~~g~~~l~~ft~~k~v~~~~~ 445 (484)
T PLN02203 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFG----RYHGKYSFDTFSHEKAVLRRSL 445 (484)
T ss_pred HHhCCcceEEECCcccccCCCCCCCCCcCcccCC----ccccHHHHHHhcceeEEEEcCc
Confidence 9999999999998754 2367899999999986 3579999999999999987743
No 45
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-71 Score=633.26 Aligned_cols=403 Identities=18% Similarity=0.196 Sum_probs=334.3
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++..++ .+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|++|+..
T Consensus 35 ~~~P~t~~~i~~~~~a~------~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~ 108 (496)
T PLN00412 35 ITNPSTRKTQYKVQACT------QEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAK 108 (496)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 45577899999988888 899999999999999999999999999999999999999999999999998877643
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccccccccccccc---CCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTEL---ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 444 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 444 (738)
++. .++..+...+++.+.....+... +...+.... ..+...+++|+|+|||++|+|| ||. ++++++
T Consensus 109 ----~a~-~Ev~~~~~~l~~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 179 (496)
T PLN00412 109 ----DAV-TEVVRSGDLISYTAEEGVRILGE----GKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKI 179 (496)
T ss_pred ----HHH-HHHHHHHHHHHHHHHHHHHHhcC----CcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHH
Confidence 221 12222223333333332222110 111110000 1122456889999999999998 685 678999
Q ss_pred HHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHH
Q 004665 445 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 522 (738)
Q Consensus 445 ~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~ 522 (738)
+|||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.+++.+|..||+||+|+|||| .+|+.|++
T Consensus 180 ~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~ 254 (496)
T PLN00412 180 APALIAGNAVVLKPPTQGAVAALHMVHCFHL----AGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISK 254 (496)
T ss_pred HHHHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 4578888999999999999999 99999998
Q ss_pred hC-CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCce-----
Q 004665 523 ST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----- 595 (738)
Q Consensus 523 ~a-~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~----- 595 (738)
++ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||++|| |+|+++|+++++++.+.
T Consensus 255 ~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 333 (496)
T PLN00412 255 KAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA-DALVEKVNAKVAKLTVGPPEDD 333 (496)
T ss_pred HhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHH-HHHHHHHHHHHHhCccCCCccc
Confidence 87 48999999999999999999999999999999999988 999999999999999 79999999998876431
Q ss_pred ----------------------------ee-cCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHH
Q 004665 596 ----------------------------LF-GGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 639 (738)
Q Consensus 596 ----------------------------~~-g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN 639 (738)
++ |+.....++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 334 ~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an 413 (496)
T PLN00412 334 CDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN 413 (496)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHh
Confidence 11 111111122 5 2 4689999999999999999999999999999
Q ss_pred cCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCC-CCCCCcccCccccccccccccccchhHHhhcceeeEEEEcC
Q 004665 640 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 717 (738)
Q Consensus 640 ~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~ 717 (738)
+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||.|.||+|+ ++|++|+++||+.|+++++.
T Consensus 414 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i~~~~ 488 (496)
T PLN00412 414 ASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGS----QGITNSINMMTKVKSTVINL 488 (496)
T ss_pred CCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCC----CChHHHHHHhcceEEEEEec
Confidence 9999999999999999999999999999999998764 34578999999999863 57999999999999998764
No 46
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=1e-71 Score=632.51 Aligned_cols=397 Identities=20% Similarity=0.197 Sum_probs=338.8
Q ss_pred HHHhhc-CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 290 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 290 i~~~~t-g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
+.++.+ ++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.|++.
T Consensus 18 v~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (473)
T cd07097 18 NRNPSDTSDVVGKYARAS------AEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTL 91 (473)
T ss_pred eECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 345674 88899998888 89999999999999999999999999999999999999999999999987776553
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
. ++ ..|+..+++.+++++...+. .+...+. ...+...+++++|+|||++|+|| ||+ +++++++
T Consensus 92 ~----~a--------~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~ 157 (473)
T cd07097 92 P----EA--------RGEVTRAGQIFRYYAGEALRLSGETLPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIA 157 (473)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHH
Confidence 2 21 23566777777776654332 2222211 11244567899999999999997 696 5679999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+.+|+++.++++++.+ + +|+|++|+|+| +.+++..|..||+||+|+||||+.+|+.|+++
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 233 (473)
T cd07097 158 PALAYGNTVVFKPAELTPASAWALVEILEE----AGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAA 233 (473)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 45678888889999999999999999999887
Q ss_pred C---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----
Q 004665 524 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 594 (738)
Q Consensus 524 a---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----- 594 (738)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 234 aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 312 (473)
T cd07097 234 AAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIH-DRFVEALVERTKALKVGDALD 312 (473)
T ss_pred HhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 6 38999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred -----------------------------ee-ecCCcc----ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 -----------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 -----------------------------~~-~g~~~~----~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .++ + | | +++++++||+||||++|++|+|+|
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 392 (473)
T cd07097 313 EGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYD 392 (473)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHH
Confidence 11 233221 133 3 5 2 358999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceee
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
|||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||.|.||+|. +++|++|+++||+.|
T Consensus 393 eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~---~~~g~~~l~~f~~~k 469 (473)
T cd07097 393 EALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP---REQGEAALEFYTTIK 469 (473)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc---cCCcHHHHHHhhcee
Confidence 999999999999999999999999999999999999999987654 3578999999998861 256999999999999
Q ss_pred EEE
Q 004665 712 WIL 714 (738)
Q Consensus 712 ~v~ 714 (738)
+|.
T Consensus 470 ~v~ 472 (473)
T cd07097 470 TVY 472 (473)
T ss_pred EEe
Confidence 985
No 47
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=1e-71 Score=629.78 Aligned_cols=398 Identities=22% Similarity=0.252 Sum_probs=334.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (452)
T cd07147 4 TNPYTGEVVARVALAG------PDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIK- 76 (452)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4567899999998888 899999999999999999999999999999999999999999999998877655432
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccc-cccccccccc--cCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
++ ..|+...+..++++++... ..++..+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (452)
T cd07147 77 ---DA--------RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVA 145 (452)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHH
Confidence 21 1245555555555543221 1122111000 01234556789999999999998 585 5689999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
+||++||+||+|||+.+|.++.+|++++++ + +|+|++|+|+++.+.+..|..||++|+|+||||+.+|+.|++.+
T Consensus 146 ~ALaaGN~VIlKps~~~p~~~~~l~~~l~~----ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a 221 (452)
T cd07147 146 PAIAAGCPFVLKPASRTPLSALILGEVLAE----TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARA 221 (452)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999987 7 99999999997555677788899999999999999999999886
Q ss_pred C-CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 ~-~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
+ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++..
T Consensus 222 ~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 300 (452)
T cd07147 222 GKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVY-DEFKSRLVARVKALKTGDPKDDAT 300 (452)
T ss_pred CcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 4 8999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred --------------------------ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHc
Q 004665 595 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 640 (738)
Q Consensus 595 --------------------------~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~ 640 (738)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 301 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~ 380 (452)
T cd07147 301 DVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVND 380 (452)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhC
Confidence 11 1222111233 5 2 36889999999999999999999999999999
Q ss_pred CCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 641 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 641 ~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
++|||++||||+|.++++++++++++|+|+||+++.. .+..||||.|+||+| +++|++|+++||+.|+|++
T Consensus 381 ~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 381 SKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIG----REGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhcceeEEeC
Confidence 9999999999999999999999999999999987654 467899999999986 3679999999999999864
No 48
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=1.3e-71 Score=629.31 Aligned_cols=398 Identities=19% Similarity=0.251 Sum_probs=336.5
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|+|++..
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (456)
T cd07145 4 RNPANGEVIDTVPSLS------REEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIK- 76 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 3467889999998888 899999999999999999999999999999999999999999999998877765432
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccc-cccccccccc--cCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
++ ..|+..+++.++++++..+ ..+...+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 145 (456)
T cd07145 77 ---QS--------RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIA 145 (456)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 22 2356666666666654332 1122111100 00133467889999999999998 686 5678999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
+||++||+||+|||+.+|+++.++++++++ + +|+|++|+|+| +.++++.|..||++++|+||||+.+|+.|++.
T Consensus 146 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 221 (456)
T cd07145 146 PAIAVGNSVVVKPSSNTPLTAIELAKILEE----AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASK 221 (456)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996 56778888899999999999999999999988
Q ss_pred CC---CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----
Q 004665 524 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 594 (738)
Q Consensus 524 a~---~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----- 594 (738)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 222 aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 300 (456)
T cd07145 222 AGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVY-DKFLKLLVEKVKKLKVGDPLD 300 (456)
T ss_pred HhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCCC
Confidence 74 9999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred -----------------------------ee-ecCCcccc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHH
Q 004665 595 -----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 636 (738)
Q Consensus 595 -----------------------------~~-~g~~~~~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~ 636 (738)
++ .|+....+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 301 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 380 (456)
T cd07145 301 ESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVE 380 (456)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 11 23322212 33 5 2 3689999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 637 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 637 ~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
++|+++|||++||||+|.+++.++++++++|.|+||+.... .+.+||||.+.||+| +++|++|+++|++.|+|.+
T Consensus 381 ~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 381 IANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIG----REGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC----cCchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999987644 357899999999986 3679999999999999853
No 49
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=1.1e-71 Score=633.03 Aligned_cols=396 Identities=17% Similarity=0.193 Sum_probs=337.4
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR---RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 367 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~ 367 (738)
.++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++.+|.|++
T Consensus 27 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 100 (481)
T cd07141 27 INPATGEKICEVQEGD------KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKP 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 3467899999998888 8999999999999998 699999999999999999999999999999888776554
Q ss_pred HhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChHH-HHHHH
Q 004665 368 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIA 444 (738)
Q Consensus 368 ~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~ 444 (738)
.. +.. ..++..+++.++++++..+. .+...+. ..+...+.+++|+|||++|+|| ||.. .++++
T Consensus 101 ~~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 166 (481)
T cd07141 101 FS----KSY-------LVDLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKL 166 (481)
T ss_pred hH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHH
Confidence 21 111 23566666677766654332 2322211 1223467889999999999997 6964 58999
Q ss_pred HHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHH
Q 004665 445 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 522 (738)
Q Consensus 445 ~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~ 522 (738)
++||++||+||+|||+.+|+++..|++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+.+|++|++
T Consensus 167 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 167 APALACGNTVVLKPAEQTPLTALYLASLIKE----AGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5567888889999999999999999999987
Q ss_pred hCC----CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---
Q 004665 523 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 594 (738)
Q Consensus 523 ~a~----~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--- 594 (738)
.++ +|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY-DEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 653 7999999999999999999999999999999999988 999999999999999 7999999998886532
Q ss_pred -------------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 11 233221 12 33 5 2 368999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.|.||+| +++|++|+++||+.|+
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 477 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNG----RELGEYGLQEYTEVKT 477 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCC----ccchHHHHHHHhheEE
Confidence 999999999999999999999999999999999999999987766778899999999986 3579999999999999
Q ss_pred EEE
Q 004665 713 ILR 715 (738)
Q Consensus 713 v~~ 715 (738)
+++
T Consensus 478 v~~ 480 (481)
T cd07141 478 VTI 480 (481)
T ss_pred EEE
Confidence 875
No 50
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=1.8e-71 Score=627.57 Aligned_cols=393 Identities=17% Similarity=0.181 Sum_probs=328.4
Q ss_pred hhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhch
Q 004665 293 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 372 (738)
Q Consensus 293 ~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~ 372 (738)
+.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|+|++..
T Consensus 3 P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~--- 73 (454)
T cd07101 3 PFTGEPLGELPQST------PADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARR--- 73 (454)
T ss_pred CCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH---
Confidence 56899999998888 899999999999999999999999999999999999999999999999988876643
Q ss_pred hhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHH
Q 004665 373 AKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 449 (738)
Q Consensus 373 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 449 (738)
++. .|+..++..+++++...+. .+..............+.+++|+|||++|+|| ||+ +++++++|||+
T Consensus 74 -~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALa 144 (454)
T cd07101 74 -HAF--------EEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALL 144 (454)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHH
Confidence 221 2334444444444322211 11110000001123567889999999999997 695 57899999999
Q ss_pred hCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC--
Q 004665 450 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 525 (738)
Q Consensus 450 aGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-- 525 (738)
+||+||+|||+.+|+++.++++++.+ + ||+|++|+|+| +.+++..|..| +|+|+||||+.+|++|++.++
T Consensus 145 aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~ 218 (454)
T cd07101 145 AGNAVVLKPDSQTALTALWAVELLIE----AGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRR 218 (454)
T ss_pred cCCEEEEECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999986 7 99999999996 55677777776 689999999999999998773
Q ss_pred -CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---------
Q 004665 526 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 594 (738)
Q Consensus 526 -~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--------- 594 (738)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~~~~~~~~ 297 (454)
T cd07101 219 LIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVY-DEFVRRFVARTRALRLGAALDYGPD 297 (454)
T ss_pred CCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999887531
Q ss_pred -------------------------ee-ecCCc-c--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 595 -------------------------GL-FGGPR-A--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 595 -------------------------~~-~g~~~-~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
++ .|+.. . .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (454)
T cd07101 298 MGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIEL 377 (454)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHH
Confidence 12 23321 1 12 33 5 2 36789999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCC---CCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~---~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+|+++|||++||||+|.+++.++++++++|+|+||++.. ..+..||||.|.||+| +++|++|+++||+.|+++
T Consensus 378 ~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 378 ANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLG----RRHGAEGLLKYTETQTVA 453 (454)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccC----ccchHHHHHHhcceEEEe
Confidence 999999999999999999999999999999999998654 2356899999999986 357999999999999986
No 51
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.3e-71 Score=626.95 Aligned_cols=396 Identities=18% Similarity=0.200 Sum_probs=339.1
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|+|++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (453)
T cd07115 3 NPATGELIARVAQAS------AEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIR-- 74 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 356888899998888 889999999999999999999999999999999999999999999999888765432
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 448 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 448 (738)
++. ..++..+++.+++++.+.+. .+...+. ..+...+++++|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (453)
T cd07115 75 --AAR-------RLDVPRAADTFRYYAGWADKIEGEVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPAL 142 (453)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 221 12455666666666554332 2322221 1234567899999999999998 696 5679999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
++||+||+|||+++|+++..+++++++ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 143 aaGN~Vi~Kps~~~p~~~~~l~~~~~~----aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~ 218 (453)
T cd07115 143 AAGNTVVLKPAELTPLSALRIAELMAE----AGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG 218 (453)
T ss_pred hcCCEEEEECCCCCcHHHHHHHHHHHh----cCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999986 7 99999999996 456778888899999999999999999999876
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcC---------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 593 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~--------- 593 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.
T Consensus 219 ~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 297 (453)
T cd07115 219 NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIY-DEFLERFTSLARSLRPGDPLDPKT 297 (453)
T ss_pred cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 799999999887652
Q ss_pred -------------------------ceee-cCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 594 -------------------------VGLF-GGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 594 -------------------------~~~~-g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
.+++ |+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07115 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRI 377 (453)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHH
Confidence 1222 43322 23 33 5 2 36789999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEEc
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~ 716 (738)
+|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||.++||+| +++|++|+++||+.|+++++
T Consensus 378 ~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 378 ANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFG----REMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCC----cCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999987777778999999999986 35799999999999999764
No 52
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=1.3e-71 Score=627.11 Aligned_cols=394 Identities=20% Similarity=0.227 Sum_probs=337.6
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
++.+|+.++++...+ .+|+++|+++|++||+. |+. ++.+|.++|++++++|++|+++|++++++|.||+..
T Consensus 3 nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 75 (455)
T cd07120 3 DPATGEVIGTYADGG------VAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILG 75 (455)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 467899999999988 89999999999999984 998 999999999999999999999999999887765432
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++ ..|+..+++.++++++..+. .+...+. ..+...++.|+|+|||++|+|| ||. +.+++++|
T Consensus 76 ----~a--------~~Ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 140 (455)
T cd07120 76 ----EA--------RFEISGAISELRYYAGLARTEAGRMIEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAP 140 (455)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHH
Confidence 22 23566677777776654332 2322211 1234567899999999999998 585 56899999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+|||+.+|.++..++++++++ + +|+|++|+|++ +.++++.|..||++++|+||||+.+|+.|++.+
T Consensus 141 AL~aGN~vvlKps~~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 217 (455)
T cd07120 141 ALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAA 217 (455)
T ss_pred HHHcCCEEEeECCCCChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999863 4 99999999996 556788888999999999999999999998876
Q ss_pred ---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc------
Q 004665 525 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 594 (738)
Q Consensus 525 ---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------ 594 (738)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 218 a~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~ 296 (455)
T cd07120 218 APTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIA-DEVRDRLAARLAAVKVGPGLDP 296 (455)
T ss_pred HhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ----------------------------ee-ecCCc-c----cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 ----------------------------GL-FGGPR-A----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 ----------------------------~~-~g~~~-~----~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+.+ . .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 297 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~d 376 (455)
T cd07120 297 ASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEA 376 (455)
T ss_pred CCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHH
Confidence 12 22321 1 12 23 5 2 368899999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
|||+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.++||+| +++|++|+++||+.|+
T Consensus 377 eai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~ft~~k~ 452 (455)
T cd07120 377 EAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLG----RLHGVAALEDFIEYKH 452 (455)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccC----ccchHHHHHHHhceeE
Confidence 999999999999999999999999999999999999999998777778899999999986 3579999999999999
Q ss_pred EEE
Q 004665 713 ILR 715 (738)
Q Consensus 713 v~~ 715 (738)
|++
T Consensus 453 v~~ 455 (455)
T cd07120 453 IYL 455 (455)
T ss_pred EeC
Confidence 863
No 53
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.7e-71 Score=628.05 Aligned_cols=393 Identities=19% Similarity=0.207 Sum_probs=337.2
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
++.+|+.++++...+ .+|+++++++|++||+.|. ++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (454)
T cd07109 3 DPSTGEVFARIARGG------AADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLT- 75 (454)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH-
Confidence 467899999999888 8999999999999999876 99999999999999999999999999999888765432
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..++..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 76 ---~a--------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 141 (454)
T cd07109 76 ---QA--------RADVEAAARYFEYYGGAADKLHGETIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPA 141 (454)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 21 23566667777766654332 2222221 1244568899999999999998 695 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+|||+.+|+|+.++++++.+ + ||+|++|+|++ +.+.++.|..||++|+|+||||+.+|+.|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 217 (454)
T cd07109 142 LAAGNAVVVKPAEDAPLTALRLAELAEE----AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA 217 (454)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 556777788899999999999999999999876
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~G~p~~~~ 296 (454)
T cd07109 218 ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIY-DEVLERLVERFRALRVGPGLEDP 296 (454)
T ss_pred hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCcccC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred --------------------------eee-cCCcc-----cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHH
Q 004665 595 --------------------------GLF-GGPRA-----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 634 (738)
Q Consensus 595 --------------------------~~~-g~~~~-----~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEA 634 (738)
+++ |+... .+ ++ | | +++++++||+||||++|++|+|+|||
T Consensus 297 ~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deA 376 (454)
T cd07109 297 DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEA 376 (454)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHH
Confidence 222 33221 12 33 5 2 36899999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCC-CCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 635 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 635 i~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
|+++|+++|||++||||+|.++++++++++++|.|+||+.. ......||||.|.||+| +++|++|+++||+.|+|
T Consensus 377 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~i 452 (454)
T cd07109 377 IALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG----REKGLEALYNYTQTKTV 452 (454)
T ss_pred HHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999876 44567899999999986 35799999999999998
Q ss_pred E
Q 004665 714 L 714 (738)
Q Consensus 714 ~ 714 (738)
+
T Consensus 453 ~ 453 (454)
T cd07109 453 A 453 (454)
T ss_pred e
Confidence 5
No 54
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=2.1e-71 Score=627.32 Aligned_cols=396 Identities=19% Similarity=0.211 Sum_probs=336.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++.+|+|++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (451)
T cd07150 4 LNPADGSVYARVAVGS------RQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYG- 76 (451)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 3467899999998888 899999999999999999999999999999999999999999999999887765532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..|+...++.+++++...+. .+...+.. ..+...+.+++|+|||++|+|| ||. +.++++++|
T Consensus 77 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 143 (451)
T cd07150 77 ---KA--------WFETTFTPELLRAAAGECRRVRGETLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFA 143 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHH
Confidence 22 12455555566655543322 22222211 1244567889999999999997 696 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+|||+.+|.|+.++++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 144 LaaGN~VilKps~~~p~t~~~l~~~~~~----ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 219 (451)
T cd07150 144 LAAGNTVVLKPSEETPVIGLKIAEIMEE----AGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG 219 (451)
T ss_pred HhcCCeEEEECCccCcHHHHHHHHHHHH----hCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 567888888999999999999999999998776
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 220 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 298 (451)
T cd07150 220 RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVY-DEFVKKFVARASKLKVGDPRDPD 298 (451)
T ss_pred hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ---------------------------ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHH
Q 004665 595 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 639 (738)
Q Consensus 595 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN 639 (738)
++ .|+.....++ | | +++.+++||+||||++|++|+|+||||+++|
T Consensus 299 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 378 (451)
T cd07150 299 TVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELAN 378 (451)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 11 1221111123 5 2 3578999999999999999999999999999
Q ss_pred cCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC-CCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 640 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 640 ~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+++|||++||||+|.++++++++++++|.|+||+++... +.+||||.+.||+| +++|++|+++||+.|+|++
T Consensus 379 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 379 DTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFG----REGGEWSMEEFTELKWITV 451 (451)
T ss_pred CCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccC----cCCcHHHHHHhheeeEEeC
Confidence 999999999999999999999999999999999986544 56899999999886 3579999999999999863
No 55
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=3.1e-71 Score=626.09 Aligned_cols=397 Identities=21% Similarity=0.276 Sum_probs=335.7
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|.|++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 76 (453)
T cd07094 4 HNPYDGEVIGKVPADD------RADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3567899999998888 899999999999999999999999999999999999999999999999887765532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-cccccccc--ccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT--ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
++ ..++..+++.++++++..+. .++..+.. ....+...+++++|+|||++|+|| +|+ +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (453)
T cd07094 77 ---DA--------RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLA 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 21 12444555555554432221 12211110 001244567889999999999998 685 5689999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
+||++||+||+|||+.+|+++.++++++++ + +|+|++|+|+| +.++++.|..||++|+|+||||+++|+.|++.
T Consensus 146 ~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~ 221 (453)
T cd07094 146 PAIATGCPVVLKPASKTPLSALELAKILVE----AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996 55668888889999999999999999999988
Q ss_pred C-CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 524 T-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 524 a-~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07094 222 AGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELY-DEFIEAFVAAVKKLKVGDPLDED 300 (453)
T ss_pred cCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 7 48999999999999999999999999999999999988 999999999999999 7999999999876532
Q ss_pred ---------------------------ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHH
Q 004665 595 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 639 (738)
Q Consensus 595 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN 639 (738)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07094 301 TDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIAN 380 (453)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 11 1222212233 5 2 4689999999999999999999999999999
Q ss_pred cCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 640 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 640 ~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++|||++||||+|.++++++++++++|+|+||++... .+..||||.|+||+| +++|++|+++||+.|+|+
T Consensus 381 ~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 381 STDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG----REGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccC----cCChHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999997654 467899999999986 367999999999999985
No 56
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=1.4e-71 Score=630.59 Aligned_cols=392 Identities=16% Similarity=0.189 Sum_probs=336.2
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++.+...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|+|++..
T Consensus 18 ~nP~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 90 (467)
T TIGR01804 18 INPANQEVIATVAEAT------REDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLE- 90 (467)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3567889999998888 899999999999999999999999999999999999999999999998877765532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++. ..++..+++.++++++..+.. +...+. ......+.+|+|+|||++|+|| ||. +.+++++||
T Consensus 91 ---~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (467)
T TIGR01804 91 ---ETS-------VADMDDIADVFEFFAGLADKDGGEIIPL---PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPA 157 (467)
T ss_pred ---HHh-------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 221 235667777777776544332 222211 1113457889999999999998 696 567999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++++
T Consensus 158 LaaGN~VvlKps~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~ 233 (467)
T TIGR01804 158 LAAGNAMVFKPSEITPLTALKVAELMEE----AGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA 233 (467)
T ss_pred HhcCCEEEeeCCccCcHHHHHHHHHHHH----cCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 467888888999999999999999999999887
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 234 ~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 312 (467)
T TIGR01804 234 DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIK-EKFEARLVERTKRIKLGDGFDEA 312 (467)
T ss_pred hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999998876521
Q ss_pred ---------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 392 (467)
T TIGR01804 313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSED 392 (467)
T ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHH
Confidence 12 233221 12 23 5 2 468999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceee
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
|||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+| +++|.+|+++||+.|
T Consensus 393 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 393 EVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIG----RENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccC----CCChHHHHHHHhccC
Confidence 999999999999999999999999999999999999999997766677899999999986 357999999999875
No 57
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=6.6e-71 Score=630.44 Aligned_cols=428 Identities=18% Similarity=0.200 Sum_probs=350.8
Q ss_pred CchHHHHHHHHHHHHcCCc---EEEEeCcc-----chhHHHhhc-CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004665 260 GGMTAKVNAAYCAACAGIP---VVITSGFA-----MDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL 330 (738)
Q Consensus 260 ggM~~Kl~aa~~a~~~gi~---v~I~~g~~-----~~~i~~~~t-g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w 330 (738)
+-|+.+++.++...++..+ =.+++|.. .-.+.++.+ |+.++++..++ .+++++++++|++||+.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~------~~~v~~av~~A~~A~~~W 85 (512)
T cd07124 12 EENRAAFRAALARVREELGREYPLVIGGKEVRTEEKIESRNPADPSEVLGTVQKAT------KEEAEAAVQAARAAFPTW 85 (512)
T ss_pred HHHHHHHHHHHHHHHhhcccccceeECCEEecCCCeEEeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHH
Confidence 3456677776655555422 12335431 123456776 88899999888 899999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-cccccc
Q 004665 331 QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILK 409 (738)
Q Consensus 331 ~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~ 409 (738)
+++|.++|.++|++++++|++++++|++++++|+|++.. ++. .|+..+++.++++++..+. .+...+
T Consensus 86 ~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~--------~ev~~~i~~~~~~~~~~~~~~~~~~~ 153 (512)
T cd07124 86 RRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWA----EAD--------ADVAEAIDFLEYYAREMLRLRGFPVE 153 (512)
T ss_pred hcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 999999999999999999999999999999888766532 221 2455555555555433221 122221
Q ss_pred ccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcE
Q 004665 410 RTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLI 486 (738)
Q Consensus 410 ~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv 486 (738)
. ..+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.+|+++..|++++.+ + +|+|++
T Consensus 154 ~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv 226 (512)
T cd07124 154 M---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE----AGLPPGVV 226 (512)
T ss_pred C---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCCCce
Confidence 1 1234567889999999999998 686 5679999999999999999999999999999999987 7 999999
Q ss_pred EEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---------CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHH
Q 004665 487 GLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICHVYVDKSANLDVAKNIVIDA 556 (738)
Q Consensus 487 ~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---------~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~ 556 (738)
|+|+| +.+++..|..||++|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+|.|++.++++
T Consensus 227 ~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~ 306 (512)
T cd07124 227 NFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRS 306 (512)
T ss_pred EEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHH
Confidence 99996 556788899999999999999999999998765 36999999999999999999999999999999
Q ss_pred ccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---------------------------------ee-ecCCc
Q 004665 557 KIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------------GL-FGGPR 601 (738)
Q Consensus 557 ~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---------------------------------~~-~g~~~ 601 (738)
+|.|+| .|+|++|||||+++| |+|+++|+++++++.+ ++ .|+..
T Consensus 307 ~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~ 385 (512)
T cd07124 307 AFGFQGQKCSACSRVIVHESVY-DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEV 385 (512)
T ss_pred HHhhCCCccccceEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCcc
Confidence 999988 999999999999999 7999999999987532 11 23322
Q ss_pred c----ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEE
Q 004665 602 A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 669 (738)
Q Consensus 602 ~----~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V 669 (738)
. .++ + | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|
T Consensus 386 ~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 465 (512)
T cd07124 386 LELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNL 465 (512)
T ss_pred CCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceE
Confidence 1 233 3 6 2 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCC--CCCCcccCccccccccccccccchhHHhhcceeeEEEEc
Q 004665 670 FHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 670 ~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~ 716 (738)
+||+.... .+..||||.|.||+|. +++|++|+++||+.|+|.++
T Consensus 466 ~vN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 466 YANRKITGALVGRQPFGGFKMSGTGS---KAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred EECCCCCCCCCCCCCCCccccccCCC---ccCcHHHHHHhccEEEEEEe
Confidence 99987543 2458999999999862 24589999999999999874
No 58
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=4e-71 Score=624.95 Aligned_cols=398 Identities=20% Similarity=0.213 Sum_probs=335.6
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+ ++|.++|.++|++++++|++|.++|++++..|+|++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (459)
T cd07089 3 NPATEEVIGTAPDAG------AADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM- 75 (459)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 456889999998888 8999999999999999999 99999999999999999999999999999888766531
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-ccc-ccccc-cCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQI-LKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
++.. .|+...++.++++++..+.. +.. .+... ...+...+++++|+|||++|+|| ||+ +.+++++
T Consensus 76 ---~~~~-------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~ 145 (459)
T cd07089 76 ---TARA-------MQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLA 145 (459)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHH
Confidence 1111 24444555555544332211 111 11100 01234567899999999999997 696 5689999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
+||++||+||+|||+.+|.++..+++++.+ + ||+|++|+|+| +.+++..|..||++++|+||||+.+|+.|++.
T Consensus 146 ~AL~aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~ 221 (459)
T cd07089 146 PALAAGNTVVLKPAPDTPLSALLLGEIIAE----TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQ 221 (459)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 45578888899999999999999999999987
Q ss_pred C---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----
Q 004665 524 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 594 (738)
Q Consensus 524 a---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----- 594 (738)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 222 aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~ 300 (459)
T cd07089 222 AAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY-DEVVEALAAAFEALPVGDPAD 300 (459)
T ss_pred HHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 7 38999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred -----------------------------ee-ecCCcc----cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 -----------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 -----------------------------~~-~g~~~~----~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 301 ~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 380 (459)
T cd07089 301 PGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDD 380 (459)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHH
Confidence 11 233221 12 33 5 2 368899999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
|||+++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||.|.||+| +++|++|+++||+.|+
T Consensus 381 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~l~~ft~~k~ 456 (459)
T cd07089 381 EAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLG----RENGIEGLEEFLETKS 456 (459)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCC----CCchHHHHHHhhceeE
Confidence 999999999999999999999999999999999999999998766677899999999986 3579999999999999
Q ss_pred EEE
Q 004665 713 ILR 715 (738)
Q Consensus 713 v~~ 715 (738)
|.+
T Consensus 457 v~~ 459 (459)
T cd07089 457 IAY 459 (459)
T ss_pred EeC
Confidence 864
No 59
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=3.7e-71 Score=629.63 Aligned_cols=397 Identities=20% Similarity=0.231 Sum_probs=339.1
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
.++.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|++.
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 91 (482)
T cd07119 18 INPANGEVIATVPEGT------AEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTL 91 (482)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3567889999998888 8899999999999997 5999999999999999999999999999999988776543
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhccc-cccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
. ++ ..|+..+++.+++++...+ ..++..+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 92 ~----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 156 (482)
T cd07119 92 R----ES--------EIDIDDVANCFRYYAGLATKETGEVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLA 156 (482)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHH
Confidence 2 22 1356666666666654432 22322221 1234567899999999999997 696 5679999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+.+|.|+.++++++.+ + +|+|++|+|++ +.++++.|..||++|+|+||||+.+|++|+++
T Consensus 157 ~ALaaGN~VilKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 232 (482)
T cd07119 157 PALAAGNTVVIKPSEVTPLTTIALFELIEE----AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRA 232 (482)
T ss_pred HHHhcCCEEEEECCccccHHHHHHHHHHHH----cCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 44578888889999999999999999999987
Q ss_pred C---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----
Q 004665 524 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 594 (738)
Q Consensus 524 a---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----- 594 (738)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 233 aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~~~~ 311 (482)
T cd07119 233 AAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIH-DKFVAALAERAKKIKLGNGLD 311 (482)
T ss_pred HHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 6 38999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred -----------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCC
Q 004665 595 -----------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 630 (738)
Q Consensus 595 -----------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~ 630 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|
T Consensus 312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 11 233221 12 23 5 2 3688999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhccee
Q 004665 631 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 710 (738)
Q Consensus 631 ~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~ 710 (738)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|++|+++||+.
T Consensus 392 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~~ 467 (482)
T cd07119 392 EEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIG----RELGPTGLEEYQET 467 (482)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhce
Confidence 99999999999999999999999999999999999999999987666677899999999986 35799999999999
Q ss_pred eEEEEcC
Q 004665 711 RWILRGN 717 (738)
Q Consensus 711 K~v~~~~ 717 (738)
|+++++.
T Consensus 468 k~v~~~~ 474 (482)
T cd07119 468 KHININL 474 (482)
T ss_pred EEEEEec
Confidence 9998864
No 60
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=3.4e-71 Score=624.75 Aligned_cols=393 Identities=21% Similarity=0.241 Sum_probs=336.5
Q ss_pred hhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 293 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 293 ~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
+.+++.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|+||+..
T Consensus 4 P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (454)
T cd07118 4 PAHGVVVARYAEGT------VEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPIS- 76 (454)
T ss_pred CCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 56889999999988 89999999999999985 9999999999999999999999999999999877765421
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..|+..+++.+++++...+. .+...+. ...+...++.|+|+|||++|+|| ||+ ++++++++|
T Consensus 77 ---~a--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~A 143 (454)
T cd07118 77 ---QA--------RGEIEGAADLWRYAASLARTLHGDSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFA 143 (454)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHH
Confidence 21 24666677777766653322 1222211 11233457889999999999997 696 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+|||+.+|.++.++++++++ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|++|++.+
T Consensus 144 LaaGN~Vi~Kps~~~p~~~~~l~~~~~~----aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 219 (454)
T cd07118 144 LAAGCTVVVKPSEFTSGTTLMLAELLIE----AGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA 219 (454)
T ss_pred HhcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 456788888999999999999999999999876
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 220 ~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~g~p~~~~ 298 (454)
T cd07118 220 RNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIA-DAFVAAVVARSRKVRVGDPLDPE 298 (454)
T ss_pred hcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred ---------------------------ee-ecCCcc---ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHHHH
Q 004665 595 ---------------------------GL-FGGPRA---SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 635 (738)
Q Consensus 595 ---------------------------~~-~g~~~~---~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi 635 (738)
++ .|+... .++ + | | +++++++||+||||++|++|+|+||||
T Consensus 299 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai 378 (454)
T cd07118 299 TKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAI 378 (454)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHH
Confidence 11 233221 122 3 5 2 367899999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 636 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 636 ~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||.|.||+| +++|++|+++||+.|+++
T Consensus 379 ~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 379 ALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIG----RELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999998777778899999999886 367999999999999985
No 61
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=9.7e-71 Score=628.46 Aligned_cols=398 Identities=17% Similarity=0.182 Sum_probs=334.7
Q ss_pred HHhh-cCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 291 IKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 291 ~~~~-tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
.++. +++.++++...+ .+||++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|.|++..
T Consensus 51 ~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 124 (511)
T TIGR01237 51 INPCDPSEVVGKVGKAS------VEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIP 124 (511)
T ss_pred ECCCCCCcEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHH
Confidence 3566 488889988888 899999999999999999999999999999999999999999999999887765532
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++ ..|+..+++.++++++..+. .+...+. ...+...+++++|+|||++|+|| ||+ +++++++|
T Consensus 125 ----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ 190 (511)
T TIGR01237 125 ----EA--------DAEVAEAIDFCEYYAREMERLAGQGVNL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVA 190 (511)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 21 12455555556655543221 1221111 11234567889999999999998 686 56899999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|+| +.+++..|..||++++|+||||+.+|+.|++.|
T Consensus 191 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 266 (511)
T TIGR01237 191 PIVTGNCVVLKPAETSTVIAAKIVEILIE----AGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDA 266 (511)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 567888888999999999999999999998765
Q ss_pred C---------CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc
Q 004665 525 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 594 (738)
Q Consensus 525 ~---------~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~ 594 (738)
. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 267 a~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 267 AKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVY-DAVVERFVEATRSLNV 345 (511)
T ss_pred hcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHH-HHHHHHHHHHHHhCCC
Confidence 3 6999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ---------------------------------e-eecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCC
Q 004665 595 ---------------------------------G-LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 630 (738)
Q Consensus 595 ---------------------------------~-~~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~ 630 (738)
+ +.|+... .+ ++ | | ++|++++||+||||++|++|+|
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 0 1232211 12 23 5 2 4689999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC--CCCCcccCccccccccccccccchhHHhhcc
Q 004665 631 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLL 708 (738)
Q Consensus 631 ~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft 708 (738)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+..||||.|.||+|. +++|++|+++||
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~~~~ 502 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS---KAGGPDYLLQFM 502 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC---cCCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999987543 2457999999999862 246899999999
Q ss_pred eeeEEEEc
Q 004665 709 TTRWILRG 716 (738)
Q Consensus 709 ~~K~v~~~ 716 (738)
+.|+|+.+
T Consensus 503 ~~k~v~~~ 510 (511)
T TIGR01237 503 QPKTVTEN 510 (511)
T ss_pred ceEEEEEe
Confidence 99999764
No 62
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=4e-71 Score=628.38 Aligned_cols=397 Identities=17% Similarity=0.185 Sum_probs=338.8
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ--ALQSQDRRKILLDVADALEANESLIKVENEADVAAA 367 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~ 367 (738)
+.++.+++.++++...+ .+++++++++|++||+.|+ ++|.++|.++|++++++|++++++|++++.+|+|++
T Consensus 23 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 96 (476)
T cd07091 23 TINPATEEVICQVAEAD------EEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKP 96 (476)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 34567889999998888 8999999999999999854 999999999999999999999999999998776554
Q ss_pred HhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHH
Q 004665 368 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 444 (738)
Q Consensus 368 ~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 444 (738)
.. +.. ..|+..+++.+++++++.+. .+...+. ..+...+++++|+|||++|+|| ||. ++++++
T Consensus 97 ~~----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 97 LE----ESA-------KGDVALSIKCLRYYAGWADKIQGKTIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 21 111 23667777777777654432 2332221 1234567899999999999998 696 567999
Q ss_pred HHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHH
Q 004665 445 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 522 (738)
Q Consensus 445 ~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~ 522 (738)
+|||++||+||+|||+.+|.++..+++++.+ + ||+|++|+|++ +.+++..|..||++|+|+||||+.+|+.|++
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~ 238 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKE----AGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIME 238 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 5567888889999999999999999999998
Q ss_pred hCC----CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---
Q 004665 523 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 594 (738)
Q Consensus 523 ~a~----~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--- 594 (738)
++. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~L~~~~~~~~~g~p 317 (476)
T cd07091 239 AAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY-DEFVEKFKARAEKRVVGDP 317 (476)
T ss_pred HHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHH-HHHHHHHHHHHhhCCCCCC
Confidence 762 7999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred -------------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 318 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07091 318 FDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTED 397 (476)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHH
Confidence 11 133221 12 33 5 2 357899999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
|||+++|+++|||++||||+|.++++++++++++|+|+||+.+...+.+||||.|.||+| +++|++|+++||+.|+
T Consensus 398 eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~ 473 (476)
T cd07091 398 EVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFG----RELGEEGLEEYTQVKA 473 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhhceeE
Confidence 999999999999999999999999999999999999999997777778999999999986 3579999999999999
Q ss_pred EEE
Q 004665 713 ILR 715 (738)
Q Consensus 713 v~~ 715 (738)
+.+
T Consensus 474 ~~~ 476 (476)
T cd07091 474 VTI 476 (476)
T ss_pred EeC
Confidence 853
No 63
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=1e-70 Score=622.95 Aligned_cols=396 Identities=18% Similarity=0.183 Sum_probs=332.0
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+++.++++...+ .+|+++|+++|++|| +.++..+|.++|++++++|++++++|++++++|+|++..
T Consensus 23 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 91 (472)
T TIGR03250 23 YPYNGTVVGTVPKAS------VDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKK-- 91 (472)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH--
Confidence 466889999998888 889999999999886 468999999999999999999999999999887766532
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhccc-ccccccccc--ccCCCceEEEEeeee-eeEEEEeCC-ChH-HHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~~~ 445 (738)
++ ..++..+++.+++++.... ..+...+.. ....+...+++|+|+ |||++|+|| ||. +++++++
T Consensus 92 --~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~ 161 (472)
T TIGR03250 92 --DS--------LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIA 161 (472)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 21 2356666777776664332 122221100 001233567889998 999999998 686 5679999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+++|+++.++++++++ + ||+|++|+|+| +.+.+..|..||++++|+||||+.+|+.|++.
T Consensus 162 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 237 (472)
T TIGR03250 162 PAIATNNRMVVKPSEKTPLSALYLADILYE----AGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAAR 237 (472)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 45677888889999999999999999999987
Q ss_pred CC-CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 524 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 524 a~-~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 238 a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~ 316 (472)
T TIGR03250 238 AGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVA-DRFTELLVEKTRAWRYGDPMDPS 316 (472)
T ss_pred hcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 74 8999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ---------------------------ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHH
Q 004665 595 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 639 (738)
Q Consensus 595 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN 639 (738)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN 396 (472)
T TIGR03250 317 VDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISN 396 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHh
Confidence 11 1222111233 5 2 4689999999999999999999999999999
Q ss_pred cCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC-CCCcccCccccccccccccccchhHHhhcceeeEEEEc
Q 004665 640 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 640 ~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~ 716 (738)
+++|||++||||+|.+++.++++++++|+||||+.+... +.+||||.|.||+|. +++|++|+++||+.|+++++
T Consensus 397 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~---~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 397 STAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY---KEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred CCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC---CCChHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999875443 458999999999862 23568999999999999765
No 64
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=4.9e-71 Score=627.96 Aligned_cols=397 Identities=18% Similarity=0.184 Sum_probs=338.1
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
.++.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+|++.
T Consensus 40 ~nP~tg~~i~~v~~~~------~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 113 (494)
T PRK09847 40 VDPVTQAPLAKIARGK------SVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPI 113 (494)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567899999998888 8999999999999997 6999999999999999999999999999999887776542
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
. ++. ..++..+++.++++++..+.. ++..+. ..+...+++|+|+|||++|+|| ||. +++++++
T Consensus 114 ~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (494)
T PRK09847 114 R----HSL-------RDDIPGAARAIRWYAEAIDKVYGEVATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLG 179 (494)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEecceeEEEEECCCccHHHHHHHHHH
Confidence 1 111 135666666777666544322 322221 1233457889999999999998 696 5689999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|+| +.+.+..|..||++|+|+||||+.+|++|++.
T Consensus 180 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~ 255 (494)
T PRK09847 180 PALAAGNSVILKPSEKSPLSAIRLAGLAKE----AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD 255 (494)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55677778889999999999999999999886
Q ss_pred C----CCcEEEecCCcCeEEEcCCC-CHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---
Q 004665 524 T----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 594 (738)
Q Consensus 524 a----~~p~~lElGGk~p~iV~~dA-Dld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--- 594 (738)
+ .+|+++|||||||+||++|+ |+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 256 aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 334 (494)
T PRK09847 256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA-DEFLALLKQQAQNWQPGHP 334 (494)
T ss_pred hhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 5 38999999999999999997 999999999999999988 999999999999999 7999999999987621
Q ss_pred ------------------------------ee-ecCCcc--cccc-c-C-----CCCCccccCcccceEEEEEeCCHHHH
Q 004665 595 ------------------------------GL-FGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 634 (738)
Q Consensus 595 ------------------------------~~-~g~~~~--~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEA 634 (738)
++ .|+... ..++ | | +++++++||+||||++|++|+|+|||
T Consensus 335 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 414 (494)
T PRK09847 335 LDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQA 414 (494)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHH
Confidence 11 232211 1233 5 2 35889999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 635 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 635 i~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
|+++|+++|||++||||+|.+++.++++++++|+|+||+.+......||||.|.||+| +++|.+|+++||+.|+|.
T Consensus 415 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v~ 490 (494)
T PRK09847 415 LQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNG----RDKSLHALEKFTELKTIW 490 (494)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccC----ccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999997766677899999999986 367999999999999997
Q ss_pred Ec
Q 004665 715 RG 716 (738)
Q Consensus 715 ~~ 716 (738)
+.
T Consensus 491 ~~ 492 (494)
T PRK09847 491 IS 492 (494)
T ss_pred Ee
Confidence 64
No 65
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=1.5e-70 Score=625.84 Aligned_cols=399 Identities=16% Similarity=0.189 Sum_probs=335.1
Q ss_pred HHHhh-cCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 290 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 290 i~~~~-tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
+.++. +|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|+|++.
T Consensus 36 ~~~P~~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 109 (500)
T cd07083 36 SVSPFAPSEVVGTTAKAD------KAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNW 109 (500)
T ss_pred eeCCCCCCcEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCH
Confidence 34555 588899998888 89999999999999999999999999999999999999999999999988776543
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
. ++ ..|+..+++.++++++..... +..... ....+...+++++|+|||++|+|| ||+ +.+++++
T Consensus 110 ~----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 176 (500)
T cd07083 110 V----EA--------IDDVAEAIDFIRYYARAALRLRYPAVEV-VPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIV 176 (500)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-CCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHH
Confidence 1 11 235566666666655433211 111100 001234567889999999999998 695 5679999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 177 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 177 APVAVGNTVIAKPAEDAVVVGYKVFEIFHE----AGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHcCCeEEEeCCCcchHHHHHHHHHHHH----cCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56788888899999999999999999999877
Q ss_pred CC---------CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcC
Q 004665 524 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG 593 (738)
Q Consensus 524 a~---------~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~ 593 (738)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~ 331 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY-EPVLERLLKRAERLS 331 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHcCC
Confidence 52 8999999999999999999999999999999999988 999999999999999 799999999988753
Q ss_pred c---------------------------------e-eecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeC
Q 004665 594 V---------------------------------G-LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD 629 (738)
Q Consensus 594 ~---------------------------------~-~~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~ 629 (738)
+ + +.|+... .+ ++ | | +++++++||+||||++|++|+
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 411 (500)
T cd07083 332 VGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYK 411 (500)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeC
Confidence 2 0 1233221 12 33 5 2 368999999999999999999
Q ss_pred --CHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC--CCCcccCccccccccccccccchhHHh
Q 004665 630 --DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVE 705 (738)
Q Consensus 630 --~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~--~~~pfGgg~~sG~~~~~~~~~G~~g~~ 705 (738)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.+... +.+||||.|.||+|. +++|+++++
T Consensus 412 d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~ 488 (500)
T cd07083 412 DDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA---KTGGPHYLR 488 (500)
T ss_pred CCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC---cccCHHHHH
Confidence 9999999999999999999999999999999999999999999875543 457999999998862 246899999
Q ss_pred hcceeeEEEE
Q 004665 706 GLLTTRWILR 715 (738)
Q Consensus 706 ~ft~~K~v~~ 715 (738)
+||+.|++..
T Consensus 489 ~~~~~k~~~~ 498 (500)
T cd07083 489 RFLEMKAVAE 498 (500)
T ss_pred HhhheeEEEE
Confidence 9999999875
No 66
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=8.6e-71 Score=629.39 Aligned_cols=400 Identities=18% Similarity=0.188 Sum_probs=332.0
Q ss_pred hHHHhh-cCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-cHHHHHHHHHHHHHH
Q 004665 289 SIIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEA-NESLIKVENEADVAA 366 (738)
Q Consensus 289 ~i~~~~-tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~~eel~~~~~~d~~~ 366 (738)
.+.++. +|+.++++...+ .+||++|+++|++||+.|+++|..+|.++|++++++|++ |+++|++++..|+||
T Consensus 49 ~v~~P~~tg~~l~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk 122 (522)
T cd07123 49 KQVMPHDHAHVLATYHYAD------AALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGK 122 (522)
T ss_pred EEECCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCC
Confidence 345677 489999998888 899999999999999999999999999999999999996 899999998877655
Q ss_pred HHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeee-eeEEEEeCC-ChH-HHHH
Q 004665 367 AQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQ 442 (738)
Q Consensus 367 ~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~ 442 (738)
+.. ++. ..++...++.+++++...+. .+..... ...+...+++++|+ |||++|+|| ||. +..+
T Consensus 123 ~~~----~a~-------~~~v~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~ 189 (522)
T cd07123 123 NVW----QAE-------IDAACELIDFLRFNVKYAEELYAQQPLS--SPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNL 189 (522)
T ss_pred CHH----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCceEEEECCcccHHHHHHH
Confidence 421 111 12455556666665543322 1221111 11234567889999 999999998 685 5678
Q ss_pred HHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHH
Q 004665 443 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQI 520 (738)
Q Consensus 443 ~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i 520 (738)
+++||| +||+||+|||++||+++..|++++.+ + ||+|+||+|+| +.++++.|..||+|++|+||||+++|+.|
T Consensus 190 ~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i 264 (522)
T cd07123 190 AGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEE----AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSL 264 (522)
T ss_pred HHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 999999 69999999999999999999999987 7 99999999996 55688888899999999999999999999
Q ss_pred HHhCC---C------cEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHH
Q 004665 521 KESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQ 590 (738)
Q Consensus 521 ~~~a~---~------p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~ 590 (738)
++.|+ + |+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++
T Consensus 265 ~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~ 343 (522)
T cd07123 265 WKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW-PEVKERLLEELK 343 (522)
T ss_pred HHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHh
Confidence 98763 4 899999999999999999999999999999999988 999999999999999 799999999988
Q ss_pred hcCc-----------------------------------ee-ecCCcc--ccc-c-c-C-----CCCCccccCcccceEE
Q 004665 591 HEGV-----------------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCT 624 (738)
Q Consensus 591 ~~~~-----------------------------------~~-~g~~~~--~~~-~-p-v-----~~~~i~~eE~FGPVl~ 624 (738)
++.+ ++ .|+... .++ + | | ++|++++||+||||++
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~ 423 (522)
T cd07123 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLT 423 (522)
T ss_pred hCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEE
Confidence 7532 11 123221 133 3 6 3 4689999999999999
Q ss_pred EEEeCC--HHHHHHHHHcCC-CCcEEEEEecCHHHHHHHHHhc--ceeEEEECCCCCC--CCCCcccCcccccccccccc
Q 004665 625 VEIVDD--VRAAIDHIHQHG-SAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIH 697 (738)
Q Consensus 625 v~~~~~--~dEAi~~aN~~~-~GLsa~VfT~d~~~a~~~~~~l--~~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~ 697 (738)
|++|+| +||||+++|+++ |||++||||+|.+++.++++++ ++|+||||+.... .+..||||.|.||+|+ +
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg---~ 500 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND---K 500 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc---c
Confidence 999994 799999999995 9999999999999999999996 5999999986543 3468999999999852 3
Q ss_pred ccchhHHhhcceeeEEEEc
Q 004665 698 ARGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 698 ~~G~~g~~~ft~~K~v~~~ 716 (738)
++|++++++||+.|++...
T Consensus 501 ~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 501 AGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCCHHHHHHhcceEEEEEe
Confidence 5799999999999998763
No 67
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=1.3e-70 Score=622.84 Aligned_cols=403 Identities=20% Similarity=0.223 Sum_probs=335.7
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|+|++.
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 72 (465)
T cd07098 2 DPATGQHLGSVPADT------PEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTM--- 72 (465)
T ss_pred CCCCCCeeEEeeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 356899999998888 89999999999999999999999999999999999999999999999988776542
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-c-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-I-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
.++.. .++..+++.+++++...+. . ....+......+...+++++|+|||++|+|| ||. ..++++++|
T Consensus 73 -~~a~~-------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~A 144 (465)
T cd07098 73 -VDASL-------GEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAA 144 (465)
T ss_pred -HHHHH-------HHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHH
Confidence 22221 2344444444444322111 1 1111100001123456789999999999997 686 457899999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+++|+++..+++++.++|.++ +|+|++|+|+|+.+++..|..||+|++|+||||+.+|++|++.+
T Consensus 145 LaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~ 224 (465)
T cd07098 145 LFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE 224 (465)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999999888889 99999999997557788888999999999999999999998876
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 225 ~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~G~p~~~~~ 303 (465)
T cd07098 225 SLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY-DKLLEILTDRVQALRQGPPLDGDV 303 (465)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 49999999999999999999999999999999999988 999999999999999 7999999998876521
Q ss_pred --------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 304 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 383 (465)
T cd07098 304 DVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEE 383 (465)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHH
Confidence 12 232211 12 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC--CCCCcccCccccccccccccccchhHHhhcceee
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
||+++|+++|||++||||+|.+++.++++++++|.|+||..... .+..||||.|.||+| +++|++|+++||+.|
T Consensus 384 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k 459 (465)
T cd07098 384 AVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFG----RFAGEEGLRGLCNPK 459 (465)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCC----ccChHHHHHHhheeE
Confidence 99999999999999999999999999999999999999986422 357899999999986 367999999999999
Q ss_pred EEEEc
Q 004665 712 WILRG 716 (738)
Q Consensus 712 ~v~~~ 716 (738)
++.++
T Consensus 460 ~~~~~ 464 (465)
T cd07098 460 SVTED 464 (465)
T ss_pred EEEEe
Confidence 99763
No 68
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=1.9e-70 Score=627.00 Aligned_cols=424 Identities=19% Similarity=0.189 Sum_probs=348.5
Q ss_pred HHHHHHHHHcCCc--EEEEeCccc-----hhHHHhhc-CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHH
Q 004665 266 VNAAYCAACAGIP--VVITSGFAM-----DSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQD 337 (738)
Q Consensus 266 l~aa~~a~~~gi~--v~I~~g~~~-----~~i~~~~t-g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~ 337 (738)
++.++..++.+.+ +-+++|... -.+.++.+ |+.++++...+ .+|+++++++|++||+.|+.++.++
T Consensus 19 ~~~~~~~~~~~~~~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~ 92 (518)
T cd07125 19 LADALKAFDEKEWEAIPIINGEETETGEGAPVIDPADHERTIGEVSLAD------AEDVDAALAIAAAAFAGWSATPVEE 92 (518)
T ss_pred HHHHHHHhhhcCcccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 3455555565533 444554431 24456788 99999999988 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccc-cccccccCC
Q 004665 338 RRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQ-ILKRTELAD 415 (738)
Q Consensus 338 R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 415 (738)
|.++|++++++|++++++|++++++|+|++.. ++. .++..+++.++++++..+. .+. ..+. +.
T Consensus 93 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~~ 157 (518)
T cd07125 93 RAEILEKAADLLEANRGELIALAAAEAGKTLA----DAD--------AEVREAIDFCRYYAAQARELFSDPELPG---PT 157 (518)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCCccccC---CC
Confidence 99999999999999999999999988766542 221 2444455555554432221 111 1111 12
Q ss_pred CceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-
Q 004665 416 GLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS- 491 (738)
Q Consensus 416 ~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~- 491 (738)
+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+++.++++++.+ + +|+|++|+|++
T Consensus 158 g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~ 233 (518)
T cd07125 158 GELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHE----AGVPRDVLQLVPGD 233 (518)
T ss_pred CceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH----cCCCCCcEEEEecC
Confidence 34567889999999999998 696 5689999999999999999999999999999999986 7 99999999996
Q ss_pred CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC------CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-ee
Q 004665 492 REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-AC 564 (738)
Q Consensus 492 ~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a------~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C 564 (738)
+.+++..|..||+||+|+||||+++|++|++.+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|
T Consensus 234 ~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C 313 (518)
T cd07125 234 GEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRC 313 (518)
T ss_pred chhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 445788888999999999999999999998865 37999999999999999999999999999999999988 99
Q ss_pred cccceeEEeccccchHHHHHHHHHHHhcCce---------------------------------e-ecCCcc--cc-cc-
Q 004665 565 NAMETLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPRA--SK-LL- 606 (738)
Q Consensus 565 ~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~---------------------------------~-~g~~~~--~~-~~- 606 (738)
+|++|+|||+++| |+|+++|+++++++++. + .|+... .+ ++
T Consensus 314 ~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~ 392 (518)
T cd07125 314 SALRLLYLQEEIA-ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVA 392 (518)
T ss_pred CCCeEEEEcchhH-HHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEc
Confidence 9999999999999 79999999999876321 1 122211 12 23
Q ss_pred c-C---CCCCccccCcccceEEEEEeC--CHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC--
Q 004665 607 Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-- 678 (738)
Q Consensus 607 p-v---~~~~i~~eE~FGPVl~v~~~~--~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~-- 678 (738)
| | .+|++++||+||||++|++|+ |+||||+++|+++|||++||||+|.++++++++++++|.|+||+++...
T Consensus 393 Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~ 472 (518)
T cd07125 393 PGIIEIVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIV 472 (518)
T ss_pred cEEEeecCChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCC
Confidence 5 3 268999999999999999999 9999999999999999999999999999999999999999999876532
Q ss_pred CCCcccCccccccccccccccchhHHhhcceeeEEEEcCc
Q 004665 679 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 718 (738)
Q Consensus 679 ~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~~ 718 (738)
+..||||.|.||+|. +++|++|+++||+.|+|++...
T Consensus 473 ~~~PfGG~~~SG~G~---~~gg~~~~~~ft~~k~i~~~~~ 509 (518)
T cd07125 473 GRQPFGGWGLSGTGP---KAGGPNYLLRFGNEKTVSLNTT 509 (518)
T ss_pred CCCCCCCcccccCCc---ccccHHHHHHhcceEEEEEEcc
Confidence 468999999999862 2468999999999999988654
No 69
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=8.1e-71 Score=623.10 Aligned_cols=394 Identities=21% Similarity=0.225 Sum_probs=334.5
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|+|++..
T Consensus 3 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (457)
T cd07108 3 NPATGQVIGEVPRSR------AADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALR-- 74 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcH--
Confidence 467899999998888 899999999999999999999999999999999999999999999999988766520
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 448 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 448 (738)
.++ ..|+..+++.+++++..... .+...+. ..+...++.++|+|||++|+|| ||. +.++++++||
T Consensus 75 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 142 (457)
T cd07108 75 -TQA--------RPEAAVLADLFRYFGGLAGELKGETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPAL 142 (457)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHH
Confidence 011 23566666666666644321 2222221 1234567889999999999998 686 5679999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC--
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 525 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-- 525 (738)
++||+||+|||+++|.++.++++++++ ++|+|++|+|+| +.++++.|..||++|+|+||||+.+|+.|++.+.
T Consensus 143 aaGN~VVlKps~~~p~~~~~l~~~~~~----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~ 218 (457)
T cd07108 143 VAGNTVVLKAAEDAPLAVLLLAEILAQ----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADR 218 (457)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHH----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999986 499999999996 5567888888999999999999999999998773
Q ss_pred -CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHc-cccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 526 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 526 -~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~-f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
+|+++|||||||+||++|||+|.|++.+++++ |.|+| +|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~vg~p~~~~~ 297 (457)
T cd07108 219 LIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIY-DAFLEKLVAKLSKLKIGDPLDEAT 297 (457)
T ss_pred CCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 89999999999999999999999999999994 99887 999999999999999 7999999999876532
Q ss_pred ---------------------------ee-ecCCcc------ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 ---------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 ---------------------------~~-~g~~~~------~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .++ + | | +++++++||+||||++|++|+|+|
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 377 (457)
T cd07108 298 DIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDED 377 (457)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHH
Confidence 11 133221 122 2 5 2 368999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhH-Hhhcceee
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVG-VEGLLTTR 711 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g-~~~ft~~K 711 (738)
|||+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.|.||+|. ++|.++ +++||+.|
T Consensus 378 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~f~~~k 453 (457)
T cd07108 378 EVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGR----EASLEGMLEHFTQKK 453 (457)
T ss_pred HHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCC----CccchhHHHHhhceE
Confidence 9999999999999999999999999999999999999999987666778999999999863 467766 79999999
Q ss_pred EEE
Q 004665 712 WIL 714 (738)
Q Consensus 712 ~v~ 714 (738)
+++
T Consensus 454 ~i~ 456 (457)
T cd07108 454 TVN 456 (457)
T ss_pred EEe
Confidence 985
No 70
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=8.8e-71 Score=617.42 Aligned_cols=374 Identities=17% Similarity=0.205 Sum_probs=318.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHH
Q 004665 316 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 395 (738)
Q Consensus 316 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~ 395 (738)
|++++++|++||+.|+++|.++|.++|++++++|+++.++|++++++|+|++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~ev~~~~~~~~ 68 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIA----EA--------RAEVEKCAWICR 68 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999888766532 22 235555666666
Q ss_pred HHhhccccc-c-ccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHH
Q 004665 396 ILADMEEPI-G-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 471 (738)
Q Consensus 396 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~ 471 (738)
+++...+.. + ...+. .+...+++++|+|||++|+|| ||+ +.+++++|||++||+||+|||+.+|+++..|++
T Consensus 69 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~ 144 (429)
T cd07100 69 YYAENAEAFLADEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144 (429)
T ss_pred HHHHHHHHhcCCeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHH
Confidence 655433221 1 11111 133467889999999999998 586 567899999999999999999999999999999
Q ss_pred HHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC---CcEEEecCCcCeEEEcCCCCHH
Q 004665 472 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 547 (738)
Q Consensus 472 l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dADld 547 (738)
++.+ + +|+|++|+|+++.+.+..|..||+|++|+||||+.+|+.|++++. ||+++|||||||+||++|||+|
T Consensus 145 ~l~~----aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~ 220 (429)
T cd07100 145 LFRE----AGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLD 220 (429)
T ss_pred HHHH----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHH
Confidence 9986 7 999999999964445566778999999999999999999998873 8999999999999999999999
Q ss_pred HHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------------------------------
Q 004665 548 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 594 (738)
Q Consensus 548 ~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------------------------------- 594 (738)
.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 221 ~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 299 (429)
T cd07100 221 KAVKTAVKGRLQNAGQSCIAAKRFIVHEDVY-DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAA 299 (429)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999988 999999999999999 7999999999887532
Q ss_pred --ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHH
Q 004665 595 --GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 661 (738)
Q Consensus 595 --~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~ 661 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 300 Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 379 (429)
T cd07100 300 GATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA 379 (429)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 233221 12 33 5 2 36899999999999999999999999999999999999999999999999999
Q ss_pred HhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 662 CQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 662 ~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++++|.|+||++....+.+||||.|.||+| +++|++|+++||+.|+|+
T Consensus 380 ~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 380 RRLEAGMVFINGMVKSDPRLPFGGVKRSGYG----RELGRFGIREFVNIKTVW 428 (429)
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCccccccC----CcchHHHHHHhcceeEEe
Confidence 9999999999998766677899999999886 357999999999999985
No 71
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.1e-70 Score=623.10 Aligned_cols=391 Identities=20% Similarity=0.198 Sum_probs=331.1
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 19 ~~P~~~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 91 (466)
T cd07138 19 INPATEEVIGTVPLGT------AADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPIT- 91 (466)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4567899999998888 899999999999999999999999999999999999999999999999877765431
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 448 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 448 (738)
++. ..++...++.++++++..+...... . ....+++++|+|||++|+|| ||. +++++++|||
T Consensus 92 ---~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 92 ---LAR-------AAQVGLGIGHLRAAADALKDFEFEE-----R-RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHhhhhccccc-----c-CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 111 1134445555555544322111110 0 12346789999999999997 695 6789999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC-
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 525 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~- 525 (738)
++||+||+|||+.+|+|+.+|++++++ + +|+|++|+|++ +.++++.|..||+|++|+||||+.+|+.|++.+.
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 231 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDE----AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999986 7 99999999996 5568888889999999999999999999998873
Q ss_pred --CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 526 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 526 --~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 232 ~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 310 (466)
T cd07138 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRY-AEAEEIAAAAAEAYVVGDPRDPAT 310 (466)
T ss_pred cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999998876521
Q ss_pred --------------------------ee-ecCC-cc----ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHHH
Q 004665 595 --------------------------GL-FGGP-RA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 634 (738)
Q Consensus 595 --------------------------~~-~g~~-~~----~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEA 634 (738)
++ .|+. .. .++ + | | +++++++||+||||++|++|+|+|||
T Consensus 311 ~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~ea 390 (466)
T cd07138 311 TLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEA 390 (466)
T ss_pred cCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHH
Confidence 12 2332 11 132 3 5 2 36889999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 635 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 635 i~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
|+++|+++|||++||||+|.++++++++++++|+|+||+.. ..+.+||||.+.||+| +++|++|+++||+.|+|+
T Consensus 391 i~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 391 IAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNG----REWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCC----ccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999999999999999864 4567899999999876 357999999999999874
No 72
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=8.3e-71 Score=616.97 Aligned_cols=380 Identities=19% Similarity=0.193 Sum_probs=314.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHH
Q 004665 318 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 397 (738)
Q Consensus 318 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~ 397 (738)
+.+++|++||+.|+++|+.+|.++|++++++|++|.++|++++++|+||+.. ++.. .|+..+++.++++
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a~~-------~ev~~~~~~~~~~ 70 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEF----EAYM-------TEIGFVLSEINYA 70 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHH-------HHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999888766532 2221 2444444444444
Q ss_pred hhcccc-ccc-cccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHH
Q 004665 398 ADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 473 (738)
Q Consensus 398 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~ 473 (738)
++..+. .+. ..+......+...++.++|+|||++|+|| ||+ +.+++++|||++||+||+|||+.||.++..+++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~ 150 (449)
T cd07136 71 IKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150 (449)
T ss_pred HHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHH
Confidence 432211 111 11110001233567889999999999997 695 56899999999999999999999999999999999
Q ss_pred HhhCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHHHHH
Q 004665 474 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAK 550 (738)
Q Consensus 474 ~~al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld~Aa 550 (738)
++ ++|+|++|+|+|+.+.+..|.+|+ ||+|+||||+++|+.|++++ .+|+++|||||||+||++|||+|.|+
T Consensus 151 ~~----alP~gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa 225 (449)
T cd07136 151 EE----TFDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAA 225 (449)
T ss_pred HH----hCCCCEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHH
Confidence 86 499999999997545566666665 99999999999999999877 38999999999999999999999999
Q ss_pred HHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCce-----------------------------eecCC
Q 004665 551 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGP 600 (738)
Q Consensus 551 ~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~-----------------------------~~g~~ 600 (738)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++... +.|+.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~ 304 (449)
T cd07136 226 KRIVWGKFLNAGQTCVAPDYVLVHESVK-EKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGN 304 (449)
T ss_pred HHHHHHHHcccCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCC
Confidence 999999999988 999999999999999 79999999999876210 12332
Q ss_pred cc-cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEE
Q 004665 601 RA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 671 (738)
Q Consensus 601 ~~-~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~i 671 (738)
.. .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|..++.++++++++|+|+|
T Consensus 305 ~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~v 384 (449)
T cd07136 305 TDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCI 384 (449)
T ss_pred cCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 21 12 33 5 2 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC--CCCCcccCccccccccccccccchhHHhhcceeeEEEEcCc
Q 004665 672 NASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 718 (738)
Q Consensus 672 N~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~~ 718 (738)
|+.... .+..||||.|.||+|+ ++|.+|+++||+.|+|+++..
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v~~~~~ 429 (449)
T cd07136 385 NDTIMHLANPYLPFGGVGNSGMGS----YHGKYSFDTFSHKKSILKKST 429 (449)
T ss_pred CCccccccCCCCCccCcCcccCCc----ccCHHHHHHhccceEEEEcCC
Confidence 987543 3678999999999863 579999999999999988743
No 73
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=1e-70 Score=628.47 Aligned_cols=400 Identities=19% Similarity=0.197 Sum_probs=333.5
Q ss_pred HHHhhc-CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHHHHHH
Q 004665 290 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAA 367 (738)
Q Consensus 290 i~~~~t-g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~eel~~~~~~d~~~~ 367 (738)
+.++.+ |+.++++...+ .+||++|+++|++||+.|+++|..+|.++|++++++|+ +++++|++++++|+||+
T Consensus 50 ~~nP~t~g~~i~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~ 123 (533)
T TIGR01236 50 QVQPHNHQAVLAKATNAT------EEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKN 123 (533)
T ss_pred EECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCc
Confidence 456775 78889998888 89999999999999999999999999999999999999 59999999988777654
Q ss_pred HhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeee-eeEEEEeCC-ChH-HHHHH
Q 004665 368 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQI 443 (738)
Q Consensus 368 ~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~ 443 (738)
.. ++. .+++..+++.+++++...+.. +..... ...+...++.++|+ |||++|+|| ||. +..++
T Consensus 124 ~~----~a~-------~e~v~~~i~~~~~~a~~a~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~ 190 (533)
T TIGR01236 124 VY----QAE-------IDAVAELIDFFRFNVKYARELYEQQPSE--SAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLP 190 (533)
T ss_pred HH----HHh-------HhHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCCEEEEEeCCchHHHHHHHH
Confidence 32 211 123556666676666443322 221100 01234567889999 999999998 585 45789
Q ss_pred HHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHH
Q 004665 444 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 521 (738)
Q Consensus 444 ~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~ 521 (738)
+++|| +||+||+|||++||+++.+|++++++ + ||+|+||+|+| +.++++.|..||+|++|+||||+++|+.|+
T Consensus 191 ~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 191 GAPAL-MGNTVIWKPSITATLSNYLTMRILEE----AGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHH-hCCeEEEECCCcCCHHHHHHHHHHHh----cCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999 89999999999999999999999986 7 99999999996 467788888999999999999999999998
Q ss_pred HhCC---C------cEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHh
Q 004665 522 ESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 591 (738)
Q Consensus 522 ~~a~---~------p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~ 591 (738)
+.++ + ++++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|+|||++|| |+|+++|++++++
T Consensus 266 ~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVW-PRFKDELLAELAE 344 (533)
T ss_pred HHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHH-HHHHHHHHHHHhc
Confidence 8763 4 499999999999999999999999999999999988 999999999999999 7999999999887
Q ss_pred cCc------------------------------------ee-ecCCcc--cccc--c-C-----CCCCccccCcccceEE
Q 004665 592 EGV------------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCT 624 (738)
Q Consensus 592 ~~~------------------------------------~~-~g~~~~--~~~~--p-v-----~~~~i~~eE~FGPVl~ 624 (738)
+.+ ++ .|+... .++| | | ++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 532 11 133221 1333 5 2 4689999999999999
Q ss_pred EEEeCC--HHHHHHHH-HcCCCCcEEEEEecCHHHHHHHHHhcc--eeEEEECCCCCCC--CCCcccCcccccccccccc
Q 004665 625 VEIVDD--VRAAIDHI-HQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTRFC--DGARFGLGAEVGISTSRIH 697 (738)
Q Consensus 625 v~~~~~--~dEAi~~a-N~~~~GLsa~VfT~d~~~a~~~~~~l~--~G~V~iN~~~~~~--~~~pfGgg~~sG~~~~~~~ 697 (738)
|++|+| +||||+++ |+++|||++||||+|.+++.+++++++ +|+|+||+..... +..||||.|.||+|. +
T Consensus 425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~ 501 (533)
T TIGR01236 425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND---K 501 (533)
T ss_pred EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc---c
Confidence 999998 49999999 899999999999999999999999977 9999999765432 568999999999862 3
Q ss_pred ccchhHHhhcceeeEEEEcC
Q 004665 698 ARGPVGVEGLLTTRWILRGN 717 (738)
Q Consensus 698 ~~G~~g~~~ft~~K~v~~~~ 717 (738)
++|++|+++|++.|++....
T Consensus 502 ~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 502 AGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cCCHHHHHHhcceEEEEEEc
Confidence 57899999999999987753
No 74
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=1.6e-70 Score=622.76 Aligned_cols=395 Identities=18% Similarity=0.220 Sum_probs=336.0
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|.+++..
T Consensus 18 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 90 (468)
T cd07088 18 LNPATGEVVATVPAAT------AEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLS- 90 (468)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4567899999999888 889999999999999999999999999999999999999999999998877665432
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..++..+++.+++++.+.+. .+...+.. ..+...+.+++|+|||++|+|| ||+ +.++++++|
T Consensus 91 ---~a--------~~ev~~~~~~l~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 91 ---LA--------RVEVEFTADYIDYMAEWARRIEGEIIPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhCCccccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 21 23455566666665543322 22222211 1133567889999999999998 696 457899999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+|||+.+|.++..+++++++ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|++|++.+
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 233 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDE----AGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA 233 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 455778888899999999999999999998876
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 234 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 312 (468)
T cd07088 234 ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIY-DEFMEKLVEKMKAVKVGDPFDAA 312 (468)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred ---------------------------ee-ecCCcc---cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHH
Q 004665 595 ---------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 635 (738)
Q Consensus 595 ---------------------------~~-~g~~~~---~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi 635 (738)
++ .|+... .+ ++ | | +++.+++||+||||++|++|+|+||||
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 392 (468)
T cd07088 313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAI 392 (468)
T ss_pred CccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHH
Confidence 11 233221 13 33 5 2 368999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 636 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 636 ~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++|+++|||++||||+|.++++++++++++|.|+||++.......||||.|.||+| +++|++|+++||+.|+|.
T Consensus 393 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G----~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 393 ELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLG----GADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999998766566799999999986 357999999999999985
No 75
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.6e-70 Score=620.37 Aligned_cols=395 Identities=18% Similarity=0.185 Sum_probs=332.1
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|.|++..
T Consensus 2 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 73 (452)
T cd07102 2 SPIDGSVIAERPLAS------LEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIA-- 73 (452)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH--
Confidence 356889999988888 889999999999999999999999999999999999999999999998877765432
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 449 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 449 (738)
++. .++..+...++++++.++.+. +..... ...+...+.+++|+|||++|+|| ||. +.+++++|||+
T Consensus 74 --~~~-~ev~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALa 142 (452)
T cd07102 74 --QAG-GEIRGMLERARYMISIAEEAL------ADIRVP--EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALL 142 (452)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHHhc------CCcccC--CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHH
Confidence 211 122222333444444333321 111110 11244567889999999999997 696 56889999999
Q ss_pred hCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC---
Q 004665 450 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK--- 525 (738)
Q Consensus 450 aGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~--- 525 (738)
+||+||+|||+.+|+++..|++++++ + +|+|++|+|++..+.+..|..||+||+|+||||+.+|++|+++++
T Consensus 143 aGN~VVlKps~~~~~~~~~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~ 218 (452)
T cd07102 143 AGNAVILKHSPQTPLCGERFAAAFAE----AGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRF 218 (452)
T ss_pred cCCEEEEECCCCCcHHHHHHHHHHHh----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999986 7 999999999964467777888999999999999999999998763
Q ss_pred CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----------
Q 004665 526 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------- 594 (738)
Q Consensus 526 ~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---------- 594 (738)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 219 ~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~L~~~~~~l~vg~p~~~~~~~ 297 (452)
T cd07102 219 IKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIY-DAFVEAFVAVVKGYKLGDPLDPSTTL 297 (452)
T ss_pred CcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCCCC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999999876532
Q ss_pred ------------------------ee-ecCCc-----ccc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHH
Q 004665 595 ------------------------GL-FGGPR-----ASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 636 (738)
Q Consensus 595 ------------------------~~-~g~~~-----~~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~ 636 (738)
++ .|+.. ..+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 298 gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 377 (452)
T cd07102 298 GPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIA 377 (452)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHH
Confidence 11 23322 112 33 5 2 4688999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 637 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 637 ~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
++|+++|||++||||+|.+++.++++++++|.|+||++....+..||||.|.||+| +++|++|+++||+.|+++
T Consensus 378 ~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 378 LMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRG----VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999998766677899999999986 357999999999999985
No 76
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-70 Score=625.02 Aligned_cols=398 Identities=18% Similarity=0.226 Sum_probs=335.9
Q ss_pred hHHHhh-cCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 004665 289 SIIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 367 (738)
Q Consensus 289 ~i~~~~-tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~ 367 (738)
.+.++. +|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++++|.|++
T Consensus 53 ~~~~P~~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 126 (514)
T PRK03137 53 VSINPANKSEVVGRVSKAT------KELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKP 126 (514)
T ss_pred EeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCC
Confidence 344677 589999999988 8999999999999999999999999999999999999999999999988777654
Q ss_pred HhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc--cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHH
Q 004665 368 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI--GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 443 (738)
Q Consensus 368 ~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 443 (738)
.. ++ ..++...++.++++++..+.. +..... ..+...+++++|+|||++|+|| ||. +++++
T Consensus 127 ~~----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 191 (514)
T PRK03137 127 WA----EA--------DADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGM 191 (514)
T ss_pred HH----HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHH
Confidence 32 22 235556666666655433211 111111 1234567889999999999998 686 56799
Q ss_pred HHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHH
Q 004665 444 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 521 (738)
Q Consensus 444 ~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~ 521 (738)
+++||++||+||+|||+.+|+++..|++++.+ + +|+|++|+|++ +.+++..|..||+|++|+||||+.+|+.|+
T Consensus 192 i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~ 267 (514)
T PRK03137 192 TLAAIVAGNTVLLKPASDTPVIAAKFVEVLEE----AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIY 267 (514)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999999986 7 99999999996 556788888999999999999999999998
Q ss_pred HhCC---------CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHh
Q 004665 522 ESTK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 591 (738)
Q Consensus 522 ~~a~---------~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~ 591 (738)
+.|+ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|++++++
T Consensus 268 ~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~ 346 (514)
T PRK03137 268 ERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVY-DEVLEKVVELTKE 346 (514)
T ss_pred HHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHH-HHHHHHHHHHHHh
Confidence 8763 6999999999999999999999999999999999988 999999999999999 7999999999887
Q ss_pred cCc--------------------------------e-eecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEe
Q 004665 592 EGV--------------------------------G-LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIV 628 (738)
Q Consensus 592 ~~~--------------------------------~-~~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~ 628 (738)
+.+ + +.|+... .+ ++ | | +++++++||+||||++|++|
T Consensus 347 l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 347 LTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 632 0 1233211 12 23 5 2 46889999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC--CCCCcccCccccccccccccccchhHHhh
Q 004665 629 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEG 706 (738)
Q Consensus 629 ~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ 706 (738)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||.|.||+|. +++|.+|+++
T Consensus 427 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~~gg~~~l~~ 503 (514)
T PRK03137 427 KDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS---KAGGPDYLLL 503 (514)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc---ccCCHHHHHH
Confidence 9999999999999999999999999999999999999999999986533 2457999999999862 2468999999
Q ss_pred cceeeEEEE
Q 004665 707 LLTTRWILR 715 (738)
Q Consensus 707 ft~~K~v~~ 715 (738)
||+.|+|..
T Consensus 504 ft~~k~v~~ 512 (514)
T PRK03137 504 FLQAKTVSE 512 (514)
T ss_pred hceEEEEEE
Confidence 999999864
No 77
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=1.9e-70 Score=623.44 Aligned_cols=398 Identities=18% Similarity=0.197 Sum_probs=334.7
Q ss_pred HHhhc-CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 291 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 291 ~~~~t-g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
.++.+ ++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 19 ~~P~t~~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (478)
T cd07131 19 RNPADLEEVVGTFPLST------ASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLA 92 (478)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 34666 56789988878 889999999999999999999999999999999999999999999998877655421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++ ..++...++.++++++..+. .+...+.. ..+...+.+++|+|||++|+|| ||. +..++++|
T Consensus 93 ----~~--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 158 (478)
T cd07131 93 ----EG--------RGDVQEAIDMAQYAAGEGRRLFGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFP 158 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHH
Confidence 11 13455556666655543221 22222111 1233567899999999999997 696 56789999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+|||+.+|+++..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 159 ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 234 (478)
T cd07131 159 ALVCGNTVVFKPAEDTPACALKLVELFAE----AGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234 (478)
T ss_pred HHHcCCEEEEECCCcCcHHHHHHHHHHHh----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 455788888999999999999999999998876
Q ss_pred ---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc------
Q 004665 525 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 594 (738)
Q Consensus 525 ---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------ 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 235 a~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 313 (478)
T cd07131 235 ARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVY-DEFLKRFVERAKRLRVGDGLDE 313 (478)
T ss_pred hhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ----------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCH
Q 004665 595 ----------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 631 (738)
Q Consensus 595 ----------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~ 631 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 393 (478)
T cd07131 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSL 393 (478)
T ss_pred CCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCH
Confidence 11 133211 12 23 5 2 35789999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhccee
Q 004665 632 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 710 (738)
Q Consensus 632 dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~ 710 (738)
||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||.++||+|. +++|.+|+++||+.
T Consensus 394 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~---~~~g~~~~~~f~~~ 470 (478)
T cd07131 394 EEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH---REAGTTALDAFTEW 470 (478)
T ss_pred HHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC---cCCcHHHHHHhhhe
Confidence 9999999999999999999999999999999999999999987654 4678999999999862 24589999999999
Q ss_pred eEEEEc
Q 004665 711 RWILRG 716 (738)
Q Consensus 711 K~v~~~ 716 (738)
|+|+++
T Consensus 471 k~i~~~ 476 (478)
T cd07131 471 KAVYVD 476 (478)
T ss_pred EEEEEe
Confidence 999875
No 78
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.6e-70 Score=623.58 Aligned_cols=397 Identities=17% Similarity=0.127 Sum_probs=330.1
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.|++..
T Consensus 19 ~~~P~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (487)
T PRK09457 19 SRNPVSGEVLWQGNDAT------AAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLW 92 (487)
T ss_pred EECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH
Confidence 34567899999998888 899999999999999999999999999999999999999999999998877765432
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcc-ccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++. .|+..+++.++++++.. +..+..... ..+...+++|+|+|||++|+|| ||. +..++++|
T Consensus 93 ----~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 93 ----EAA--------TEVTAMINKIAISIQAYHERTGEKRSE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 211 24444555544433221 112221111 1233467889999999999998 695 56799999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
||++||+||+|||+.||+|+.++++++++ + ||+|++|+|+|+.+++..|..||+||+|+||||+++|++|++++
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 233 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQ----AGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFA 233 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999987 7 99999999997656788888999999999999999999999864
Q ss_pred ---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEecccc-chHHHHHHHHHHHhcCc-----
Q 004665 525 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLA-CNGALNELVVELQHEGV----- 594 (738)
Q Consensus 525 ---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~-dd~f~~~l~~~~~~~~~----- 594 (738)
.++++||||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| | +|+++|+++++++++
T Consensus 234 ~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d-~f~~~l~~~~~~~~vG~p~~ 312 (487)
T PRK09457 234 GQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGD-AFLARLVAVAKRLTVGRWDA 312 (487)
T ss_pred hcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHH-HHHHHHHHHHhcCcCCCCCc
Confidence 26789999999999999999999999999999999988 999999999999996 6 999999998876532
Q ss_pred ------------------------------ee-ecCCc--cc-ccc-c-C----CCCCccccCcccceEEEEEeCCHHHH
Q 004665 595 ------------------------------GL-FGGPR--AS-KLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAA 634 (738)
Q Consensus 595 ------------------------------~~-~g~~~--~~-~~~-p-v----~~~~i~~eE~FGPVl~v~~~~~~dEA 634 (738)
++ .|+.. .. .++ | | ++|++++||+||||++|++|+|+|||
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~dea 392 (487)
T PRK09457 313 EPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEA 392 (487)
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 11 12211 11 233 5 2 36889999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 635 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 635 i~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
|+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.|.||+|+ ++|. ...+||+.|++
T Consensus 393 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g~-~~~~~~~~k~~ 467 (487)
T PRK09457 393 IRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR----PSAY-YAADYCAYPMA 467 (487)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCC----CCch-hHhhheeeeEE
Confidence 9999999999999999999999999999999999999987543 3568999999999863 4564 44669999999
Q ss_pred EEcC
Q 004665 714 LRGN 717 (738)
Q Consensus 714 ~~~~ 717 (738)
++..
T Consensus 468 ~~~~ 471 (487)
T PRK09457 468 SLES 471 (487)
T ss_pred EEec
Confidence 8875
No 79
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=3.8e-70 Score=624.86 Aligned_cols=397 Identities=17% Similarity=0.175 Sum_probs=331.7
Q ss_pred hhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhch
Q 004665 293 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 372 (738)
Q Consensus 293 ~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~ 372 (738)
+.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+|++..
T Consensus 39 P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~--- 109 (524)
T PRK09407 39 PFTGEPLATVPVST------AADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARR--- 109 (524)
T ss_pred CCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH---
Confidence 56789999999988 899999999999999999999999999999999999999999999999988876532
Q ss_pred hhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHH
Q 004665 373 AKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 449 (738)
Q Consensus 373 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 449 (738)
++. .|+...+..+++++...+. .+..............+..++|+|||++|+|| ||. +.+++++|||+
T Consensus 110 -~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALa 180 (524)
T PRK09407 110 -HAF--------EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALL 180 (524)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHH
Confidence 221 2344444444444432211 11110000001123567889999999999997 695 56899999999
Q ss_pred hCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC--
Q 004665 450 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 525 (738)
Q Consensus 450 aGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-- 525 (738)
+||+||+|||+.+|+++.++++++++ + +|+|++|+|++ +.++++.|..| +|+|+||||+.+|++|++.++
T Consensus 181 aGN~VIlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~ 254 (524)
T PRK09407 181 AGNAVVLKPDSQTPLTALAAVELLYE----AGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR 254 (524)
T ss_pred cCCEEEEECCCCCHHHHHHHHHHHHH----cCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999986 7 99999999996 55677777765 899999999999999998773
Q ss_pred -CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---------
Q 004665 526 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 594 (738)
Q Consensus 526 -~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--------- 594 (738)
+|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 255 ~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~~~~~~ 333 (524)
T PRK09407 255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIY-DEFVRAFVAAVRAMRLGAGYDYSAD 333 (524)
T ss_pred CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCcCCc
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred -------------------------ee-ecCCcc---cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 595 -------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 595 -------------------------~~-~g~~~~---~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 334 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~ 413 (524)
T PRK09407 334 MGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVER 413 (524)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHH
Confidence 12 233211 12 33 5 3 35899999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCC---CCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~---~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+|+++|||++||||+|.++++++++++++|.|+||++.. ..+..||||.|.||+| +++|++|+++||+.|+|+
T Consensus 414 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v~ 489 (524)
T PRK09407 414 ANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG----RRHGAEGLLKYTESQTIA 489 (524)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC----ccchHHHHHHhCCeEEEE
Confidence 999999999999999999999999999999999998654 2345799999999986 357999999999999998
Q ss_pred EcCc
Q 004665 715 RGNG 718 (738)
Q Consensus 715 ~~~~ 718 (738)
++..
T Consensus 490 ~~~~ 493 (524)
T PRK09407 490 TQRV 493 (524)
T ss_pred Eccc
Confidence 8643
No 80
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=4.2e-70 Score=616.60 Aligned_cols=395 Identities=17% Similarity=0.195 Sum_probs=336.9
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++.+|+|++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~-- 74 (450)
T cd07092 3 DPATGEEIATVPDAS------AADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH-- 74 (450)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 467899999998888 889999999999999999999999999999999999999999999999877655431
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 448 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 448 (738)
++. ..|+..+++.+++++...+.. +.... .. ..+...+++|+|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL 143 (450)
T cd07092 75 --LVR-------DDELPGAVDNFRFFAGAARTLEGPAAG-EY-LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPAL 143 (450)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccC-cc-CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHH
Confidence 111 235667777777766543322 11111 11 1233467889999999999997 696 4589999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 524 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a--- 524 (738)
++||+||+|||+.+|.++.+|.+++++ .||+|++|+|++ +++.++.|..||++|+|+||||+.+|+.|++++
T Consensus 144 ~aGN~VIlKps~~~~~~~~~l~~~~~~----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 219 (450)
T cd07092 144 AAGNTVVLKPSETTPLTTLLLAELAAE----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADT 219 (450)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHh----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 999999999999999999999999985 599999999996 445778888899999999999999999999887
Q ss_pred CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---------
Q 004665 525 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 594 (738)
Q Consensus 525 ~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 220 ~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~ 298 (450)
T cd07092 220 LKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVY-DEFVAALVEAVSAIRVGDPDDEDTE 298 (450)
T ss_pred CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHH-HHHHHHHHHHHhhCCcCCCCCCCCc
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHH
Q 004665 595 ------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 639 (738)
Q Consensus 595 ------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN 639 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 299 ~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n 378 (450)
T cd07092 299 MGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELAN 378 (450)
T ss_pred cCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHh
Confidence 11 122211 12 33 5 2 3689999999999999999999999999999
Q ss_pred cCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 640 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 640 ~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++|||++||||+|.++++++++++++|.|+||+.....+.+||||.+.||+| +++|++|+++||+.|+|.
T Consensus 379 ~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 379 DVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYG----KDLSIYALEDYTRIKHVM 449 (450)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----CCChHHHHHHHheeeEEe
Confidence 99999999999999999999999999999999988777778999999999886 357999999999999985
No 81
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=4.4e-70 Score=619.99 Aligned_cols=396 Identities=16% Similarity=0.106 Sum_probs=330.3
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.|++..
T Consensus 18 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 90 (484)
T TIGR03240 18 TNPATQEVLWQGAAAS------AAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW- 90 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4567899999998888 899999999999999999999999999999999999999999999998877765432
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccc-cccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..++..+++.+++++...+ ..+..... ..+...+++++|+|||++|+|| ||. +..+++++|
T Consensus 91 ---~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 91 ---ET--------RTEVASMIGKVAISIKAYHERTGESENP---MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 11 1345555555554432221 12222111 1223457889999999999998 696 567899999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|+|||+||+|||+.||+++..+++++++ + +|+|++|+|+|+.++++.|..||+||+|+||||+++|++|++.+
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~ 232 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEK----AGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAG 232 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHH----hCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999986 7 99999999997656788888999999999999999999999875
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccc-cchHHHHHHHHHHHhcCc------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL-ACNGALNELVVELQHEGV------ 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i-~dd~f~~~l~~~~~~~~~------ 594 (738)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++ | |+|+++|+++++++.+
T Consensus 233 ~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~-d~f~~~l~~~~~~~~~g~~~~~ 311 (484)
T TIGR03240 233 RPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQG-DAFLARLVEVAERLTVGAWDAE 311 (484)
T ss_pred cCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccH-HHHHHHHHHHHHhcccCCCCcC
Confidence 26799999999999999999999999999999999988 99999999999998 6 5999999998876522
Q ss_pred -----------------------------ee-ecCCc--ccc-cc-c-C----CCCCccccCcccceEEEEEeCCHHHHH
Q 004665 595 -----------------------------GL-FGGPR--ASK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAI 635 (738)
Q Consensus 595 -----------------------------~~-~g~~~--~~~-~~-p-v----~~~~i~~eE~FGPVl~v~~~~~~dEAi 635 (738)
++ .|+.. ..+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 312 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 391 (484)
T TIGR03240 312 PQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAI 391 (484)
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHH
Confidence 11 11111 112 33 5 3 357899999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 636 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 636 ~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||.+.||+|+ +.|.++++ ||+.|+++
T Consensus 392 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~----~~g~~~~~-~~~~~~~~ 466 (484)
T TIGR03240 392 AIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHR----PSAYYAAD-YCAYPVAS 466 (484)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCC----CCchHHHh-heeeeEEE
Confidence 999999999999999999999999999999999999986543 3568999999999863 45756655 99999999
Q ss_pred EcC
Q 004665 715 RGN 717 (738)
Q Consensus 715 ~~~ 717 (738)
++.
T Consensus 467 ~~~ 469 (484)
T TIGR03240 467 LEA 469 (484)
T ss_pred Eec
Confidence 875
No 82
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=5.2e-70 Score=616.38 Aligned_cols=395 Identities=18% Similarity=0.159 Sum_probs=331.7
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|++++++|++++.+|+|++..
T Consensus 2 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 73 (453)
T cd07099 2 NPATGEVLGEVPVTD------PAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRA-- 73 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 356889999998888 899999999999999999999999999999999999999999999999888766532
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccc-cccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..++..+++.++++++..+. .+. ..+......+...+++++|+|||++|+|| +|. +.+++++||
T Consensus 74 --~~--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~A 143 (453)
T cd07099 74 --DA--------GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPA 143 (453)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 11 12445555555555433221 111 11110001234567899999999999997 696 567899999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+.+|+++.+|++++.+ + +|+|++|+|+|..+++..|.+| .||+|+||||+++|+.|++.+
T Consensus 144 LaaGN~vilKps~~~p~~~~~l~~~l~~----ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~ 218 (453)
T cd07099 144 LAAGNAVVLKPSEVTPLVGELLAEAWAA----AGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE 218 (453)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHH----cCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 9999999999644667777777 599999999999999999877
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~~~~~~~ 297 (453)
T cd07099 219 RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVY-DEFVARLVAKARALRPGADDIGDA 297 (453)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999887621
Q ss_pred --------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 595 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 595 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07099 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIAL 377 (453)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHH
Confidence 12 244332 23 33 5 2 36789999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC--CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+|+++|||++||||+|.++++++++++++|.||||+.... .+..||||.|.||+| +++|++|+++||+.|++.
T Consensus 378 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g----~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 378 ANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG----RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC----ccChHHHHHHhcceEEEe
Confidence 9999999999999999999999999999999999987543 467899999999875 467999999999999975
No 83
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=3e-70 Score=620.79 Aligned_cols=394 Identities=20% Similarity=0.193 Sum_probs=334.4
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
.++.+|+.++.+...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|+|++.
T Consensus 19 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (471)
T cd07139 19 VSPATEEVVGRVPEAT------PADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPI 92 (471)
T ss_pred ECCCCCCEeEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567899999998888 88999999999999985 999999999999999999999999999999887765542
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-c-ccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-G-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 444 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 444 (738)
. ++. ..++..++..++++++..+.. + ...+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 93 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i 158 (471)
T cd07139 93 S----WSR-------RAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKI 158 (471)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHH
Confidence 1 111 124566666666666443211 1 11111 1234567889999999999998 686 568999
Q ss_pred HHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 445 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 445 ~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
++||++||+||+|||+.+|+++..+.+++.+ + ||+|++|+|+++.+.+..|..||++++|+||||+.+|+.|++.
T Consensus 159 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~ 234 (471)
T cd07139 159 APALAAGCTVVLKPSPETPLDAYLLAEAAEE----AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234 (471)
T ss_pred HHHHhcCCEEEEECCCcCCHHHHHHHHHHHH----cCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999986 7 9999999999755677888889999999999999999999887
Q ss_pred CC---CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----
Q 004665 524 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 594 (738)
Q Consensus 524 a~---~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----- 594 (738)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 235 ~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 313 (471)
T cd07139 235 CGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRY-DEVVEALAAAVAALKVGDPLD 313 (471)
T ss_pred HHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhCCcCCCCC
Confidence 63 8999999999999999999999999999999999987 999999999999999 7999999999877532
Q ss_pred -----------------------------ee-ecCCcc----ccc-c-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 -----------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 -----------------------------~~-~g~~~~----~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++ .|+... .++ + | | +++++++||+||||++|++|+|+|
T Consensus 314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 393 (471)
T cd07139 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDED 393 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHH
Confidence 11 233221 122 3 5 2 468899999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++. ..+.+||||.|.||+| +++|++|+++||+.|+
T Consensus 394 eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~ft~~k~ 468 (471)
T cd07139 394 DAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIG----REGGPEGLDAYLETKS 468 (471)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCC----ccchHHHHHHHhceeE
Confidence 9999999999999999999999999999999999999999876 5567899999999886 3679999999999999
Q ss_pred EE
Q 004665 713 IL 714 (738)
Q Consensus 713 v~ 714 (738)
|+
T Consensus 469 i~ 470 (471)
T cd07139 469 IY 470 (471)
T ss_pred Ee
Confidence 85
No 84
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=3.8e-70 Score=617.46 Aligned_cols=394 Identities=19% Similarity=0.201 Sum_probs=335.3
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++.+|+|++..
T Consensus 8 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 8 NPATGRVLAEVAACD------AADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 467899999998888 8999999999999998 49999999999999999999999999999999888766532
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++.. .++..+++.+++++...+. .+...+. ..+...++.|+|+|||++|+|| ||. +.+++++|
T Consensus 82 ----~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ 147 (462)
T cd07112 82 ----DALA-------VDVPSAANTFRWYAEAIDKVYGEVAPT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAP 147 (462)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHH
Confidence 2211 2455555555555443221 1221111 1234567889999999999998 696 56899999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+|||+++|.++..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 148 ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a 223 (462)
T cd07112 148 ALAAGNSVVLKPAEQSPLTALRLAELALE----AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYS 223 (462)
T ss_pred HHHcCCeeeeeCCCCCCHHHHHHHHHHHh----cCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 567888898999999999999999999998755
Q ss_pred ----CCcEEEecCCcCeEEEcCCC-CHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----
Q 004665 525 ----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 594 (738)
Q Consensus 525 ----~~p~~lElGGk~p~iV~~dA-Dld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---- 594 (738)
.||+++|||||||+||++|| |+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 224 a~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~ 302 (462)
T cd07112 224 GQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIK-DEFLEKVVAAAREWKPGDPL 302 (462)
T ss_pred HHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCC
Confidence 38999999999999999999 999999999999999988 999999999999999 7999999999876532
Q ss_pred ------------------------------ee-ecCCcc----cc-cc-c-C-----CCCCccccCcccceEEEEEeCCH
Q 004665 595 ------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 631 (738)
Q Consensus 595 ------------------------------~~-~g~~~~----~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~ 631 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 303 ~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 382 (462)
T cd07112 303 DPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSE 382 (462)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCH
Confidence 22 233221 13 33 5 2 36899999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceee
Q 004665 632 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 632 dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
||||+++|+++|||++||||+|.+++.++++++++|.|+||+.....+.+||||.|+||+| +++|++|+++||+.|
T Consensus 383 ~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~k 458 (462)
T cd07112 383 EEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNG----RDKSLHALDKYTELK 458 (462)
T ss_pred HHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhcee
Confidence 9999999999999999999999999999999999999999997766677899999999986 357999999999999
Q ss_pred EEE
Q 004665 712 WIL 714 (738)
Q Consensus 712 ~v~ 714 (738)
++.
T Consensus 459 ~i~ 461 (462)
T cd07112 459 TTW 461 (462)
T ss_pred EEE
Confidence 985
No 85
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=9.6e-70 Score=616.55 Aligned_cols=399 Identities=15% Similarity=0.136 Sum_probs=336.5
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|.|++..
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 93 (477)
T TIGR01722 20 VTNPATNEVTTKVAFAS------VDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHS 93 (477)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 44577899999999888 899999999999999999999999999999999999999999999998877655421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
++ ..|+..+++.+++++...+. .+...+. ...+...+.+++|+|||++|+|| ||. +.++++++
T Consensus 94 ----~a--------~~ev~~~i~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 159 (477)
T TIGR01722 94 ----DA--------LGDVARGLEVVEHACGVNSLLKGETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPI 159 (477)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHHH
Confidence 22 23666677777666543332 2222211 01233457789999999999997 696 45799999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
||++||+||+|||+++|.++..+++++++ + +|+|++|+|+|+.+.+..|..||+|++|+||||+.+|++|++.+
T Consensus 160 ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~ 235 (477)
T TIGR01722 160 AIACGNTFVLKPSEKVPSAAVKLAELFSE----AGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS 235 (477)
T ss_pred HHhcCCEEEeeCcccChHHHHHHHHHHHH----hCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999997555667778899999999999999999998876
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++ | +|+++|+++++++.+
T Consensus 236 ~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~-~f~~~l~~~~~~~~~G~~~~~~ 313 (477)
T TIGR01722 236 AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-D-EWVPEIRERAEKIRIGPGDDPG 313 (477)
T ss_pred hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-H-HHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999988 99999999999998 5 999999999876531
Q ss_pred ---------------------------eee-cCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHH
Q 004665 595 ---------------------------GLF-GGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 595 ---------------------------~~~-g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
+++ |+... .+ ++ | | +++.+++||+||||++|++|+|+|
T Consensus 314 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ 393 (477)
T TIGR01722 314 AEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLE 393 (477)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHH
Confidence 222 33221 12 23 6 2 368899999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC-CCCcccCccccccccccccccchhHHhhcceee
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
|||+++|+++|||++||||+|.+++++|++++++|.|+||++.... +.+||||.|.||+| +.+++|++|+++||+.|
T Consensus 394 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G--~~~~~g~~~l~~~~~~k 471 (477)
T TIGR01722 394 EAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFG--DHHIYGKQGTHFYTRGK 471 (477)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCC--CCccChHHHHHHhcCee
Confidence 9999999999999999999999999999999999999999865443 56899999999986 22356999999999999
Q ss_pred EEEEc
Q 004665 712 WILRG 716 (738)
Q Consensus 712 ~v~~~ 716 (738)
+++++
T Consensus 472 ~i~~~ 476 (477)
T TIGR01722 472 TVTTR 476 (477)
T ss_pred EEEEe
Confidence 99875
No 86
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=3.6e-70 Score=618.31 Aligned_cols=385 Identities=19% Similarity=0.225 Sum_probs=329.8
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
+.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.+++..
T Consensus 41 ~~nP~t~~~i~~~~~a~------~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 114 (480)
T cd07111 41 TINPATGEVLASVLQAE------EEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIR 114 (480)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 34567899999998878 899999999999999999999999999999999999999999999998877765432
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++.. .++...++.+++++.+.+... + .+..++|+|||++|+|| ||. +.++++++|
T Consensus 115 ----~a~~-------~ev~~~~~~~~~~~~~~~~~~----------~--~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 171 (480)
T cd07111 115 ----ESRD-------CDIPLVARHFYHHAGWAQLLD----------T--ELAGWKPVGVVGQIVPWNFPLLMLAWKICPA 171 (480)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHhc----------C--CcccceecceEEEECCCccHHHHHHHHHHHH
Confidence 2211 245556666665554332110 1 13457999999999998 696 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
|++||+||+|||+.+|.++..|++++++ + ||+|++|+|+++.+++..|..||++|+|+||||+.+|+.|++.+
T Consensus 172 LaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 172 LAMGNTVVLKPAEYTPLTALLFAEICAE----AGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHh----cCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 7 99999999997556788888999999999999999999998876
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 248 ~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVA-EELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred --------------------------eee-cCCc--ccc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 595 --------------------------GLF-GGPR--ASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 595 --------------------------~~~-g~~~--~~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
+++ |+.. ..+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 327 ~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 406 (480)
T cd07111 327 DMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVAL 406 (480)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHH
Confidence 111 2211 112 23 5 2 36889999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
+|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.|.||+| +++|++|+++||+.|+
T Consensus 407 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 407 ANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFG----REGGKEGLYEYLRPSW 477 (480)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCC----ccchHHHHHHHhhccC
Confidence 9999999999999999999999999999999999998776677899999999986 3579999999999985
No 87
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=5e-70 Score=610.61 Aligned_cols=383 Identities=21% Similarity=0.206 Sum_probs=316.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
.+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++.. ++...++..+...+++++.
T Consensus 4 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 4 LDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPF----ETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHhHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999988877642 2222233333334444444
Q ss_pred HHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHH
Q 004665 393 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 470 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~ 470 (738)
.++.+.....+..... . ..+...+++++|+|||++|+|| ||. +++++++|||++||+||+|||+.+|.++..++
T Consensus 80 ~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~ 155 (436)
T cd07135 80 NLKKWAKDEKVKDGPL---A-FMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLA 155 (436)
T ss_pred HHHHhhCCcccCCccc---c-cCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHH
Confidence 4443321111110000 0 0123457889999999999997 696 67899999999999999999999999999999
Q ss_pred HHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCH
Q 004665 471 KVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANL 546 (738)
Q Consensus 471 ~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl 546 (738)
+++++ .||+|++|+|++ ++++++ |..|| +|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+
T Consensus 156 ~l~~~----~lP~g~v~vv~g~~~~~~~-l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl 229 (436)
T cd07135 156 ELVPK----YLDPDAFQVVQGGVPETTA-LLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADL 229 (436)
T ss_pred HHHHH----hCCcCEEEEEcCCchhHHH-HHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCH
Confidence 99986 599999999996 556666 55688 99999999999999998876 3899999999999999999999
Q ss_pred HHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc------------------------------e
Q 004665 547 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G 595 (738)
Q Consensus 547 d~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------------------------------~ 595 (738)
|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+ +
T Consensus 230 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~ 308 (436)
T cd07135 230 ELAAKRILWGKFGNAGQICVAPDYVLVDPSVY-DEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK 308 (436)
T ss_pred HHHHHHHHHHHhccCCceecCCCEEeccHHHH-HHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCe
Confidence 9999999999999988 999999999999999 7999999999876532 1
Q ss_pred e-ecCCcc-cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcc
Q 004665 596 L-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 665 (738)
Q Consensus 596 ~-~g~~~~-~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~ 665 (738)
+ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 309 v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~ 388 (436)
T cd07135 309 VVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTR 388 (436)
T ss_pred EEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCC
Confidence 1 122211 12 33 5 2 358899999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEECCCCCC--CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 666 SAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 666 ~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+|.|+||+.+.. .+..||||.|.||+| +++|++|+++||+.|+|.
T Consensus 389 ~g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 389 SGGVVINDTLIHVGVDNAPFGGVGDSGYG----AYHGKYGFDTFTHERTVV 435 (436)
T ss_pred cCeEEECCccccccCCCCCcCCcCcccCC----ccccHhHHHHhccccccc
Confidence 999999986543 467899999999986 357999999999999873
No 88
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=5.7e-70 Score=609.48 Aligned_cols=375 Identities=21% Similarity=0.236 Sum_probs=310.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHH
Q 004665 318 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 397 (738)
Q Consensus 318 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~ 397 (738)
+++++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|+|++.. ++... |+..+++.++++
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~~-------ev~~~~~~~~~~ 71 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSA----ESFRD-------EVSVLVSSCKLA 71 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHHH-------HHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999988876532 22222 344444444444
Q ss_pred hhcccc-ccc-c--ccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHH
Q 004665 398 ADMEEP-IGQ-I--LKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 471 (738)
Q Consensus 398 ~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~ 471 (738)
+..... .+. . .+... .+...+++|+|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+|+.++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~ 149 (432)
T cd07137 72 IKELKKWMAPEKVKTPLTT--FPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAK 149 (432)
T ss_pred HHHHHHHhCCcccCCCccc--CCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHH
Confidence 332111 111 0 11001 122457789999999999997 696 568999999999999999999999999999999
Q ss_pred HHHhhCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHHH
Q 004665 472 VITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDV 548 (738)
Q Consensus 472 l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld~ 548 (738)
++++ ++|+|++|+|+|+.+.+..|..| ++|+|+||||+.+|++|++.+ .+|+++|||||||+||++|||+|.
T Consensus 150 ~~~~----~~P~gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~ 224 (432)
T cd07137 150 LIPE----YLDTKAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKV 224 (432)
T ss_pred HHHH----hCCcCeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHH
Confidence 9986 49999999999755566666666 599999999999999998877 499999999999999999999999
Q ss_pred HHHHHHHHcc-ccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------------------------------
Q 004665 549 AKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 594 (738)
Q Consensus 549 Aa~~iv~~~f-~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------------------------------- 594 (738)
|++.+++|+| .|+| .|+|++|+|||+++| |+|+++|+++++++..
T Consensus 225 aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga 303 (432)
T cd07137 225 AVRRIAGGKWGCNNGQACIAPDYVLVEESFA-PTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVAD 303 (432)
T ss_pred HHHHHHHHhhhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCC
Confidence 9999999999 4877 999999999999999 7999999998877521
Q ss_pred ee-ecCCcc-cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhc
Q 004665 595 GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 664 (738)
Q Consensus 595 ~~-~g~~~~-~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l 664 (738)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 304 ~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 383 (432)
T cd07137 304 KIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAET 383 (432)
T ss_pred eEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC
Confidence 11 233221 13 23 5 2 36899999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEECCCCCC--CCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 665 DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 665 ~~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
++|.|+||++... .+.+||||.|.||+| +++|.+++++||+.|+|++
T Consensus 384 ~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 384 SSGGVTFNDTVVQYAIDTLPFGGVGESGFG----AYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred CcCcEEECCccccccCCCCCCCCcCcCcCC----ccccHHHHHHhccCceeeC
Confidence 9999999987643 367899999999986 3579999999999999864
No 89
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=7.9e-70 Score=610.55 Aligned_cols=378 Identities=21% Similarity=0.251 Sum_probs=321.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHH
Q 004665 315 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 394 (738)
Q Consensus 315 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 394 (738)
||++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+|++.. ++ ..++..+++.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAA----WA--------GFNVDLAAGML 68 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999888766521 11 23566677777
Q ss_pred HHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHH
Q 004665 395 RILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 471 (738)
Q Consensus 395 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~ 471 (738)
+++++..+.. +...+.. ..+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.+|+++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 146 (432)
T cd07105 69 REAASLITQIIGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146 (432)
T ss_pred HHHHHHHHHhcCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHH
Confidence 7766543321 2222211 1234567889999999999998 686 568999999999999999999999999999999
Q ss_pred HHHhhCCCc-cCcCcEEEecCC----ChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCC
Q 004665 472 VITSAIPDT-VGEKLIGLVTSR----EEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKS 543 (738)
Q Consensus 472 l~~~al~~a-lP~gvv~vv~~~----~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~d 543 (738)
++.+ + ||+|++|+|++. .+++..|..||+||+|+||||+.+|+.|+++| .+|+++|||||||+||++|
T Consensus 147 ~~~~----aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~d 222 (432)
T cd07105 147 VFHE----AGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222 (432)
T ss_pred HHHH----cCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCC
Confidence 9986 7 999999999852 24677888899999999999999999999876 3899999999999999999
Q ss_pred CCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcC-----------------------------
Q 004665 544 ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----------------------------- 593 (738)
Q Consensus 544 ADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~----------------------------- 593 (738)
||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 223 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~g 301 (432)
T cd07105 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIA-DEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKG 301 (432)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHH-HHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999988 999999999999999 799999999887543
Q ss_pred cee-ecCCcc---cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHH
Q 004665 594 VGL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 661 (738)
Q Consensus 594 ~~~-~g~~~~---~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~ 661 (738)
.++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 302 a~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~ 381 (432)
T cd07105 302 AKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA 381 (432)
T ss_pred CEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 222 244322 23 33 5 2 36789999999999999999999999999999999999999999999999999
Q ss_pred HhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 662 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 662 ~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+++++|.|+||+++.. .+..||||.+.||+| +++|++|+++||+.|+|++
T Consensus 382 ~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 382 KRIESGAVHINGMTVHDEPTLPHGGVKSSGYG----RFNGKWGIDEFTETKWITI 432 (432)
T ss_pred HhCCcCeEEECCCCCCCCCCCCCCCccccccc----ccChHHHHHHhhceEEEeC
Confidence 9999999999997654 467899999999886 3579999999999999863
No 90
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=1.1e-69 Score=609.47 Aligned_cols=381 Identities=20% Similarity=0.209 Sum_probs=319.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHH
Q 004665 318 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 397 (738)
Q Consensus 318 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~ 397 (738)
+|+++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+||+.. ++...++..+..+++++++.++++
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~~ev~~~~~~~~~~~~~~~~~ 77 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKF----EAVLSEILLVKNEIKYAISNLPEW 77 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999998877642 333334555566777777777776
Q ss_pred hhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHh
Q 004665 398 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 475 (738)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~ 475 (738)
..... ...... ..+...++.++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|.|+..+++++++
T Consensus 78 ~~~~~-~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 152 (443)
T cd07132 78 MKPEP-VKKNLA----TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK 152 (443)
T ss_pred hCCcc-CCCccc----cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 53211 111000 0122357889999999999997 695 6789999999999999999999999999999999986
Q ss_pred hCCCccCcCcEEEecCC-ChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHHHHHH
Q 004665 476 AIPDTVGEKLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 551 (738)
Q Consensus 476 al~~alP~gvv~vv~~~-~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld~Aa~ 551 (738)
++|+|++|+++++ ++... |.+ ++||+|+||||+++|++|++.+ .+|+++|||||||+||++|||+|.|++
T Consensus 153 ----~lp~gv~~vv~g~~~~~~~-l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~ 226 (443)
T cd07132 153 ----YLDKECYPVVLGGVEETTE-LLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAAR 226 (443)
T ss_pred ----hCCcCeEEEEeCCHHHHHH-HHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHH
Confidence 4999999999964 34444 444 4899999999999999998876 399999999999999999999999999
Q ss_pred HHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----------------------------e-eecCCc
Q 004665 552 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGPR 601 (738)
Q Consensus 552 ~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----------------------------~-~~g~~~ 601 (738)
.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.. + +.|+..
T Consensus 227 ~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~ 305 (443)
T cd07132 227 RIAWGKFINAGQTCIAPDYVLCTPEVQ-EKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQT 305 (443)
T ss_pred HHHHHHHhcCCCceeCCcEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCcc
Confidence 99999999987 999999999999999 7999999998876521 0 123322
Q ss_pred c-cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEEC
Q 004665 602 A-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHN 672 (738)
Q Consensus 602 ~-~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN 672 (738)
. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 1 12 33 5 2 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCcccCccccccccccccccchhHHhhcceeeEEEEcCc
Q 004665 673 ASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 718 (738)
Q Consensus 673 ~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~~ 718 (738)
+.... .+..||||.|.||+| +++|.+|+++|++.|++++++.
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMG----AYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred CcccccCCCCCCCCCCCcccCC----CcccHHHHHHhccccEEEEccc
Confidence 87643 356899999999986 3579999999999999987754
No 91
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=2.3e-70 Score=620.18 Aligned_cols=393 Identities=22% Similarity=0.287 Sum_probs=335.3
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|++++..+|.++|++++++|++|.++|++++..|++++..
T Consensus 12 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~- 84 (462)
T PF00171_consen 12 INPATGEVIGEVPSAT------AEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIA- 84 (462)
T ss_dssp EETTTECEEEEEEEBS------HHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHH-
T ss_pred CCCCCcCEEEEEcCCC------HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccc-
Confidence 3467899999999888 899999999999999999999999999999999999999999999999888766532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 447 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 447 (738)
++ ..++..+++.++++++..+. .++..+. ..+...+++++|+|||++|+|| +|. +.++++++|
T Consensus 85 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 150 (462)
T PF00171_consen 85 ---EA--------RGEVDRAIDFLRYYADAARKLAGEVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPA 150 (462)
T ss_dssp ---HH--------HHHHHHHHHHHHHHHHHHHHHTEEEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHH
T ss_pred ---cc--------cchhhhhhhhhhhhhhcccceehhhccc---ccccccccccccccceeecccccccccccccchhhh
Confidence 22 23566677777777654433 2222222 2466788999999999999997 685 568999999
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 524 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a- 524 (738)
|++||+||+|||+.+|.++.++++++++ + +|+|++|+|+| +.+++..|..||++++|+||||+++|++|++.+
T Consensus 151 LaaGN~VVlkps~~~~~~~~~l~~~~~~----AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 226 (462)
T PF00171_consen 151 LAAGNTVVLKPSEQAPLTALLLAELLEE----AGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA 226 (462)
T ss_dssp HHTT-EEEEEEBTTSHHHHHHHHHHHHH----HTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH
T ss_pred hcccccceeeeccccccccccchhhccc----cccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc
Confidence 9999999999999999999999999997 6 99999999997 667888899999999999999999999999877
Q ss_pred --CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 525 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 525 --~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 227 ~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~l~~g~~~~~~ 305 (462)
T PF00171_consen 227 KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIY-DEFVEALKERVAKLRVGDPLDES 305 (462)
T ss_dssp TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHH-HHHHHHHHHHHHTSEBSSTTSTT
T ss_pred cccccccccccccceeeEecccccccccccccchhccccccccccccccccccccc-chhhhhhhhccccccccCCcccc
Confidence 39999999999999999999999999999999999988 999999999999999 7999999999987621
Q ss_pred ---------------------------ee-ecCC-----ccccc-c-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 ---------------------------GL-FGGP-----RASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 ---------------------------~~-~g~~-----~~~~~-~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+. ...++ + | | ++|++++||+||||++|++|+|+||
T Consensus 306 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 385 (462)
T PF00171_consen 306 TDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDE 385 (462)
T ss_dssp CSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHH
T ss_pred ccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchh
Confidence 12 2441 11122 2 5 2 4789999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCC-CcccCccccccccccccccchhHHhhcceeeE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDG-ARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~-~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
||+++|+++|||++||||+|.++++++++++++|+|+||+++..... .||||.+.||+| +++|++|+++||+.|+
T Consensus 386 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~ 461 (462)
T PF00171_consen 386 AIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG----REGGPEGLDEFTQIKT 461 (462)
T ss_dssp HHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES----EBSHHHHHHGTEEEEE
T ss_pred hhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC----cchHHHHHHHhCCccC
Confidence 99999999999999999999999999999999999999998765544 599999999887 3579999999999998
Q ss_pred E
Q 004665 713 I 713 (738)
Q Consensus 713 v 713 (738)
|
T Consensus 462 V 462 (462)
T PF00171_consen 462 V 462 (462)
T ss_dssp E
T ss_pred C
Confidence 6
No 92
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=1.3e-69 Score=613.27 Aligned_cols=395 Identities=20% Similarity=0.228 Sum_probs=338.4
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|++++++|++++.+|.|++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 76 (457)
T cd07114 3 NPATGEPWARVPEAS------AADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIR 76 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 467899999999888 8999999999999997 59999999999999999999999999999988766654421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
+ ...+++.+++.+++++...+.. +...+. ...+...+++++|+|||++|+|| ||. +.++++++
T Consensus 77 ----~--------~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 142 (457)
T cd07114 77 ----E--------TRAQVRYLAEWYRYYAGLADKIEGAVIPV--DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAP 142 (457)
T ss_pred ----H--------HHHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 1 1346777777787776543322 222111 01234567889999999999998 685 56899999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+|||+++|+++..|++++++ + +|+|+||+|++ +.+.+..|..|+++++|+||||+.+|+++++.+
T Consensus 143 AL~aGN~Vilkps~~~p~~~~~l~~~l~~----aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~a 218 (457)
T cd07114 143 ALAAGNTVVLKPSEHTPASTLELAKLAEE----AGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218 (457)
T ss_pred HHhcCCeEEeECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 556788888899999999999999999999877
Q ss_pred ---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcC-------
Q 004665 525 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG------- 593 (738)
Q Consensus 525 ---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~------- 593 (738)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 219 a~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~~ 297 (457)
T cd07114 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIY-DEFVERLVARARAIRVGDPLDP 297 (457)
T ss_pred HhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 799999999987652
Q ss_pred ---------------------------cee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCH
Q 004665 594 ---------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 631 (738)
Q Consensus 594 ---------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~ 631 (738)
.++ .|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 377 (457)
T cd07114 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDE 377 (457)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCH
Confidence 122 243321 12 33 5 2 36889999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceee
Q 004665 632 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 632 dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
||||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+..||||.|.||+|+ ++|++|+++||+.|
T Consensus 378 deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~k 453 (457)
T cd07114 378 EEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGR----ENGIEAIREYTQTK 453 (457)
T ss_pred HHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHHhcee
Confidence 99999999999999999999999999999999999999999977777788999999998863 57999999999999
Q ss_pred EEEE
Q 004665 712 WILR 715 (738)
Q Consensus 712 ~v~~ 715 (738)
++++
T Consensus 454 ~~~~ 457 (457)
T cd07114 454 SVWI 457 (457)
T ss_pred EEeC
Confidence 9853
No 93
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=1.6e-69 Score=607.03 Aligned_cols=376 Identities=17% Similarity=0.164 Sum_probs=310.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHh
Q 004665 319 MAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILA 398 (738)
Q Consensus 319 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~ 398 (738)
.+++|++||+.|+++|+.+|.++|++++++|++|+++|++++++|+||.. ..++.. .|+...++.+++++
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~---~~ea~~-------~ev~~~i~~~~~~~ 72 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRS---RHETLL-------AEILPSIAGIKHAR 72 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHH-------HHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999998887521 012211 13334444444443
Q ss_pred hcccc-ccccc-cccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHH
Q 004665 399 DMEEP-IGQIL-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVIT 474 (738)
Q Consensus 399 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~ 474 (738)
+.... .+... .......+...+++++|+|||++|+|| ||. +++++++|||++||+||+|||+.+|.++.+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~ 152 (434)
T cd07133 73 KHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLA 152 (434)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 32111 11110 000000123457889999999999997 695 678999999999999999999999999999999998
Q ss_pred hhCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHHHHHH
Q 004665 475 SAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 551 (738)
Q Consensus 475 ~al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld~Aa~ 551 (738)
+ ++|+|++|+|+|+.++++.|.+|+ +|+|+||||+.+|++|++.+ .+|+++|||||||+||++|||+|.|++
T Consensus 153 ~----alP~g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~ 227 (434)
T cd07133 153 E----YFDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAE 227 (434)
T ss_pred H----hCCcCeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHH
Confidence 6 499999999997656778787775 99999999999999999876 389999999999999999999999999
Q ss_pred HHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------------------------------eee-
Q 004665 552 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------------------GLF- 597 (738)
Q Consensus 552 ~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--------------------------------~~~- 597 (738)
.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+ +++
T Consensus 228 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~ 306 (434)
T cd07133 228 RIAFGKLLNAGQTCVAPDYVLVPEDKL-EEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIE 306 (434)
T ss_pred HHHHHHhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 99999999988 999999999999999 7999999998876421 222
Q ss_pred cCCcc----cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcc
Q 004665 598 GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 665 (738)
Q Consensus 598 g~~~~----~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~ 665 (738)
|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 307 gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~ 386 (434)
T cd07133 307 LNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTH 386 (434)
T ss_pred cCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC
Confidence 33221 12 33 5 2 368999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEECCCCC--CCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 666 SAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 666 ~G~V~iN~~~~--~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+|.|+||++.. ..+..||||.+.||+| +++|.+|+++||+.|+|+
T Consensus 387 ~G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 387 SGGVTINDTLLHVAQDDLPFGGVGASGMG----AYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cceEEECCcccccCCCCCCcCCCCcccCC----CcCCHHHHHHhcccceec
Confidence 99999998753 3367899999999986 357999999999999974
No 94
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=4.3e-70 Score=608.46 Aligned_cols=371 Identities=17% Similarity=0.209 Sum_probs=301.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHH
Q 004665 314 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 393 (738)
Q Consensus 314 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~ 393 (738)
+|+++|+++|++||+.|+++|.++|.++|++++++|++|.++|++++++|.|++.. ++. +..
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~----~~~--------------~~~ 65 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRV----EDK--------------IAK 65 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH----HHH--------------HHH
Confidence 58999999999999999999999999999999999999999999998877655421 111 111
Q ss_pred HHHHhhcccccccc-c-cccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHH
Q 004665 394 IRILADMEEPIGQI-L-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 469 (738)
Q Consensus 394 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l 469 (738)
++++++... +.. . +......+...+++|+|+|||++|+|| ||. +.++++++||++||+||+||||.||+|+.++
T Consensus 66 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l 143 (429)
T cd07121 66 NHLAAEKTP--GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYA 143 (429)
T ss_pred HHHHHHhcC--cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHH
Confidence 222221100 100 0 000001122357788999999999998 695 5689999999999999999999999999999
Q ss_pred HHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHH
Q 004665 470 HKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLD 547 (738)
Q Consensus 470 ~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld 547 (738)
++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++. .+|+++|||||||+||++|||||
T Consensus 144 ~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-~k~~~lelGGk~p~iV~~dADld 222 (429)
T cd07121 144 VELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-GKKAIGAGAGNPPVVVDETADIE 222 (429)
T ss_pred HHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-CCceEeecCCCceEEEecCCCHH
Confidence 99999888788 99999999996 45677788889999999999999999999876 59999999999999999999999
Q ss_pred HHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhc----------------------Ccee-ecCCc--
Q 004665 548 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE----------------------GVGL-FGGPR-- 601 (738)
Q Consensus 548 ~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~----------------------~~~~-~g~~~-- 601 (738)
+|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ ..+ +.++ .|+..
T Consensus 223 ~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~-~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~ 300 (429)
T cd07121 223 KAARDIVQGASFDNNLPCIAEKEVIAVDSVA-DYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASK 300 (429)
T ss_pred HHHHHHHhcccccCCCCCCccceEEEeHHHH-HHHHHHHHHC-CCEEcCHHHHHHHHHhhcccCCCccccccccCcCHHH
Confidence 999999999999988 999999999999999 7999999876 211 0111 12211
Q ss_pred --c-cccc-----c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCc--EEEEEecCHHHHHHHHHhcc
Q 004665 602 --A-SKLL-----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVD 665 (738)
Q Consensus 602 --~-~~~~-----p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GL--sa~VfT~d~~~a~~~~~~l~ 665 (738)
. .+++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|+++++
T Consensus 301 ~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~ 380 (429)
T cd07121 301 ILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQ 380 (429)
T ss_pred HHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCC
Confidence 0 1222 3 2 3689999999999999999999999999999999999 99999999999999999999
Q ss_pred eeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 666 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 666 ~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+|+||||.++. ..+||||.|.|+++- .|++| +.++..|+++.
T Consensus 381 aG~v~iN~~~~--~~~p~gG~k~s~~~~-----~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 381 TTIFVKNGPSY--AGLGVGGEGYTTFTI-----AGPTG-EGLTSARTFTR 422 (429)
T ss_pred ceEEEEcCCCc--CccccCCCccceEEe-----cCCcC-cCccChhhhhe
Confidence 99999998754 568999988887742 24555 55666666654
No 95
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=3.7e-69 Score=607.32 Aligned_cols=395 Identities=20% Similarity=0.209 Sum_probs=330.1
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|+++ |+++|.++|.++|+++++.|++|+++|++++++|.|++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 73 (451)
T cd07146 4 RNPYTGEVVGTVPAGT------EEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLK- 73 (451)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH-
Confidence 3567899999998888 89999999999875 9889999999999999999999999999999887765532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccc--cCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
++ ..|+..+++.+++++..... .++..+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 74 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~ 142 (451)
T cd07146 74 ---DT--------RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIA 142 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHH
Confidence 21 23566666666666543221 122111100 01234467889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
|||++||+||+|||+.+|+++..+.+++++ + +|+|++|++++ +.++++.|..||++|+|+||||+.+|+.|++.
T Consensus 143 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~ 218 (451)
T cd07146 143 PAIAANNRIVLKPSEKTPLSAIYLADLLYE----AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAAT 218 (451)
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 45678888899999999999999999999887
Q ss_pred CC-CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 524 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 524 a~-~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 297 (451)
T cd07146 219 AGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA-DEFVDLLVEKSAALVVGDPMDPA 297 (451)
T ss_pred hcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 74 8999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ---------------------------ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHH
Q 004665 595 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 639 (738)
Q Consensus 595 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN 639 (738)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 298 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n 377 (451)
T cd07146 298 TDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISN 377 (451)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHh
Confidence 01 1221111223 5 2 3678999999999999999999999999999
Q ss_pred cCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 640 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 640 ~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++|||++||||+|.++++++++++++|+|+||+.+.. .+..||||.|.||+++ +++|++|+++||+.|++.
T Consensus 378 ~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g---~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 378 STAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGG---KEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCc---ccChHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999986544 3568999999998631 356899999999999985
No 96
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=6.6e-69 Score=607.70 Aligned_cols=397 Identities=19% Similarity=0.262 Sum_probs=333.8
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 370 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~ 370 (738)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++.+|++++..
T Consensus 4 ~~P~tg~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (453)
T cd07149 4 ISPYDGEVIGRVPVAS------EEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHH-
Confidence 3467889999998888 889999999999999999999999999999999999999999999998887766532
Q ss_pred chhhhHHHHhhccHHHHHHHHHHHHHHhhccc-ccccccccccc--CCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 371 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 371 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
++ ..++...++.++++++..+ ..++..+.... ..+...+.+++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~ 145 (453)
T cd07149 77 ---DA--------RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVG 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHH
Confidence 21 1245555555555443221 11221111000 1123457889999999999997 686 5689999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
+||++||+||+|||+.+|.++.+|++++++ + +|+|++|+|++ +.+++..|..||++|+|+||||+++|+.|++.
T Consensus 146 ~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 221 (453)
T cd07149 146 PAIAAGNAVVLKPASQTPLSALKLAELLLE----AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARK 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996 45567888889999999999999999999988
Q ss_pred CC-CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-------
Q 004665 524 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 594 (738)
Q Consensus 524 a~-~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------- 594 (738)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07149 222 AGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIY-DEFLERFVAATKKLVVGDPLDED 300 (453)
T ss_pred cCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHH-HHHHHHHHHHHHhCCcCCCCCCC
Confidence 75 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ---------------------------ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHH
Q 004665 595 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 639 (738)
Q Consensus 595 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN 639 (738)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07149 301 TDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMAN 380 (453)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHh
Confidence 11 1222111123 5 2 3578999999999999999999999999999
Q ss_pred cCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 640 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 640 ~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++|||++||||+|.+++.++++++++|.|+||+++.. .+..||||.|.||+| +++|++|+++||+.|+|+
T Consensus 381 ~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 381 DSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG----REGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999987644 467899999999986 357999999999999985
No 97
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=3.7e-69 Score=603.62 Aligned_cols=374 Identities=17% Similarity=0.150 Sum_probs=312.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHH
Q 004665 315 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 394 (738)
Q Consensus 315 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 394 (738)
|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+|++.. ++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea--------~~ev~~~~~~~ 68 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLW----EA--------QTEVAAMAGKI 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999888766532 22 12455555555
Q ss_pred HHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHH
Q 004665 395 RILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 471 (738)
Q Consensus 395 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~ 471 (738)
++++..... .+..... ..+...+++++|+|||++|+|| ||. +++++++|||++||+||+|||+.+|+++.++++
T Consensus 69 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~ 145 (431)
T cd07095 69 DISIKAYHERTGERATP---MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVE 145 (431)
T ss_pred HHHHHHHHHhcCCcccC---CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHH
Confidence 544432211 1111111 1234567889999999999998 696 567999999999999999999999999999999
Q ss_pred HHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC----CCcEEEecCCcCeEEEcCCCCH
Q 004665 472 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----KIPVLGHADGICHVYVDKSANL 546 (738)
Q Consensus 472 l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a----~~p~~lElGGk~p~iV~~dADl 546 (738)
++.+ + +|+|++|+|+|+.+.+..|..||++|+|+||||+++|+.|++++ .+|++||||||||+||++|||+
T Consensus 146 ~~~~----ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl 221 (431)
T cd07095 146 LWEE----AGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADI 221 (431)
T ss_pred HHHH----hCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCH
Confidence 9987 7 99999999997556788888999999999999999999998864 3789999999999999999999
Q ss_pred HHHHHHHHHHccccCc-eecccceeEEecc-ccchHHHHHHHHHHHhcCce-----------------------------
Q 004665 547 DVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGVG----------------------------- 595 (738)
Q Consensus 547 d~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~-i~dd~f~~~l~~~~~~~~~~----------------------------- 595 (738)
|.|++.+++++|.|+| .|++++|+|||++ +| |+|+++|+++++++.+.
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~ 300 (431)
T cd07095 222 DAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVG-DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLL 300 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchH-HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 9999999999999988 9999999999999 99 79999999999876421
Q ss_pred -----e-ecCCcc--cc-cc-c-C----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHH
Q 004665 596 -----L-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 660 (738)
Q Consensus 596 -----~-~g~~~~--~~-~~-p-v----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~ 660 (738)
+ .|+... .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 301 ~~ga~~l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~ 380 (431)
T cd07095 301 ALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERF 380 (431)
T ss_pred hcCCEEEeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHH
Confidence 1 122111 12 33 5 2 3589999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 661 LCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 661 ~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
++++++|+|+||+++.. .+..||||.|.||+| +++|++|+++ +..|++
T Consensus 381 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~-~~~~~~ 429 (431)
T cd07095 381 LARIRAGIVNWNRPTTGASSTAPFGGVGLSGNH----RPSAYYAADY-CAYPVA 429 (431)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCcccccCC----CCChHHHHHH-Hhhhhc
Confidence 99999999999986543 356899999999986 3579999994 445544
No 98
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=6.3e-69 Score=605.25 Aligned_cols=379 Identities=16% Similarity=0.160 Sum_probs=318.7
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHH--hcCCHHHH----HHHHHHHHHHHHHc--HHHHHHHHHH
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDR----RKILLDVADALEAN--ESLIKVENEA 362 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~eel~~~~~~ 362 (738)
.++.+|+.++++..++ .+||++|+++|++||+.| +.++..+| .++|+++++.|+++ .++|++++++
T Consensus 17 ~nP~t~~~i~~~~~a~------~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~ 90 (489)
T cd07126 17 LDPLNGDKFISVPDTD------EDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQR 90 (489)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4567899999999988 899999999999999998 56779999 89999999999999 4999999887
Q ss_pred HHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-H
Q 004665 363 DVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-A 439 (738)
Q Consensus 363 d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~ 439 (738)
|+||+.. + ...|+..+++.+++|++..+. .+..........+...+++|+|+|||++|+|| ||+ +
T Consensus 91 e~GK~~~----~--------a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 91 VAPKSDA----Q--------ALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred HcCCCHH----H--------HHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 7665421 2 235788999999999865432 23321100011234568899999999999998 596 6
Q ss_pred HHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHH
Q 004665 440 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 517 (738)
Q Consensus 440 ~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g 517 (738)
.+++++|||++||+||+||||.||+++.+|++++.+ + ||+|++|+|+| +++.+. +..|++||+|+||||+++|
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~----aGlP~gv~~vv~G~~~~~~~-l~~~~~v~~V~FTGS~~vG 233 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL----CGMPATDVDLIHSDGPTMNK-ILLEANPRMTLFTGSSKVA 233 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCcCcCcEEEEeCCchhHHH-HhcCCCCCEEEEECCHHHH
Confidence 789999999999999999999999999999999987 6 99999999996 444555 5568899999999999999
Q ss_pred HHHHHhCCCcEEEecCCcCeEEEcCCC-CHHHHHHHHHHHccccCc-eecccceeEEecc-ccchHHHHHHHHHHHhcC-
Q 004665 518 SQIKESTKIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEG- 593 (738)
Q Consensus 518 ~~i~~~a~~p~~lElGGk~p~iV~~dA-Dld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~-i~dd~f~~~l~~~~~~~~- 593 (738)
|+|+..+++++.+|+|||||+||++|| |+|.|++.+++++|.|+| +|+|++|+|||++ ++ |+|+++|++.++++.
T Consensus 234 r~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~-d~f~~~l~~~~~~~~~ 312 (489)
T cd07126 234 ERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQ-AGILDKLKALAEQRKL 312 (489)
T ss_pred HHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchH-HHHHHHHHHHHHhccc
Confidence 999988888999999999999999999 999999999999999988 9999999999999 47 699999999877542
Q ss_pred ----------------------------cee-ecCCcc------c--ccc-c-C---C--------CCCccccCcccceE
Q 004665 594 ----------------------------VGL-FGGPRA------S--KLL-Q-I---P--------ETRLFHHEYNSMVC 623 (738)
Q Consensus 594 ----------------------------~~~-~g~~~~------~--~~~-p-v---~--------~~~i~~eE~FGPVl 623 (738)
.++ .|+... . .++ | | + +|++++||+||||+
T Consensus 313 g~~~~Gpli~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl 392 (489)
T cd07126 313 EDLTIGPVLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQ 392 (489)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEE
Confidence 122 233221 1 234 5 2 1 57899999999999
Q ss_pred EEEEeCC--HHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeE--EEECCCCCCCCC----CcccCcccccccc
Q 004665 624 TVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA--VFHNASTRFCDG----ARFGLGAEVGIST 693 (738)
Q Consensus 624 ~v~~~~~--~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~--V~iN~~~~~~~~----~pfGgg~~sG~~~ 693 (738)
+|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||..+...+. .||||.|.||+|+
T Consensus 393 ~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~ 470 (489)
T cd07126 393 VVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGT 470 (489)
T ss_pred EEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCC
Confidence 9999999 99999999999999999999999999999999999999 668987655443 8999999999864
No 99
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=1.1e-68 Score=605.92 Aligned_cols=395 Identities=19% Similarity=0.183 Sum_probs=335.5
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|+|++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (455)
T cd07093 3 NPATGEVLAKVPEGG------AAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPIT-- 74 (455)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--
Confidence 356889999998888 899999999999999999999999999999999999999999999999887765532
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 448 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 448 (738)
++. ..++..+++.++++++.... .+...+ ...+...+++++|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL 142 (455)
T cd07093 75 --LAR-------TRDIPRAAANFRFFADYILQLDGESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPAL 142 (455)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHhHHHhCCcccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHH
Confidence 111 12455566666655543221 111111 11244567889999999999997 686 5689999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
++||+||+|||+.+|+++..+.+++++ + +|+|+||++++ +.+.+..|..||++|+|+||||+.+|+.|++++
T Consensus 143 ~aGN~VIlkps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~ 218 (455)
T cd07093 143 AFGNTVVLKPSEWTPLTAWLLAELANE----AGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP 218 (455)
T ss_pred hcCCEEEeECCCcCcHHHHHHHHHHHh----cCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999986 7 99999999996 556778888899999999999999999999877
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|||||++++ |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 297 (455)
T cd07093 219 NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIY-DEFLERFVERAKALKVGDPLDPDT 297 (455)
T ss_pred cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 7999999999876521
Q ss_pred --------------------------ee-ecCCcc------cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHH
Q 004665 595 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 633 (738)
Q Consensus 595 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dE 633 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 377 (455)
T cd07093 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEE 377 (455)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHH
Confidence 11 233211 12 23 5 2 3688999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEE
Q 004665 634 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 713 (738)
Q Consensus 634 Ai~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v 713 (738)
||+++|+++|||++||||+|.++++++++++++|.|+||++.......||||.|.||+| +++|++|+++|++.|++
T Consensus 378 ai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~~ 453 (455)
T cd07093 378 AIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIG----REGGDYSLEFYTELKNV 453 (455)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----CCchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999998776677899999999886 35799999999999998
Q ss_pred EE
Q 004665 714 LR 715 (738)
Q Consensus 714 ~~ 715 (738)
++
T Consensus 454 ~~ 455 (455)
T cd07093 454 CI 455 (455)
T ss_pred eC
Confidence 53
No 100
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=6.4e-69 Score=609.88 Aligned_cols=408 Identities=17% Similarity=0.183 Sum_probs=340.6
Q ss_pred HHHHHHHHHcCCc--EEEEeCccc-----hhHHHhhcC-ceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHH
Q 004665 266 VNAAYCAACAGIP--VVITSGFAM-----DSIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQD 337 (738)
Q Consensus 266 l~aa~~a~~~gi~--v~I~~g~~~-----~~i~~~~tg-~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~ 337 (738)
+++++...+.++- --+++|..- -.+.++.++ +.++++...+ .+||++|+++|++||+.|+++|..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~------~~dv~~av~~A~~a~~~W~~~~~~~ 97 (500)
T TIGR01238 24 LEAQIHAWADKTWQAAPIIGHSYKADGEAQPVTNPADRRDIVGQVFHAN------LAHVQAAIDSAQQAFPTWNATPAKE 97 (500)
T ss_pred HHHHHHHHhcCceecCceECCEEecCCCeEEeeCCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 4566666666643 233354421 244567885 6889998888 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCc
Q 004665 338 RRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGL 417 (738)
Q Consensus 338 R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (738)
|.++|++++++|++++++|++++++|+|++.. ++ ..++..+++.++++++..+.. . +
T Consensus 98 R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a--------~~ev~~~i~~l~~~a~~~~~~---~-------~- 154 (500)
T TIGR01238 98 RAAKLDRLADLLELHMPELMALCVREAGKTIH----NA--------IAEVREAVDFCRYYAKQVRDV---L-------G- 154 (500)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHHHHHHHHh---c-------C-
Confidence 99999999999999999999999877765421 21 247888888888887543210 0 1
Q ss_pred eEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CC
Q 004665 418 ILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE 493 (738)
Q Consensus 418 ~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~ 493 (738)
...++|+|||++|+|| ||. +.++++++||++||+||+|||++||+++..+++++.+ + +|+|++|+|+| +.
T Consensus 155 --~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~ 228 (500)
T TIGR01238 155 --EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQE----AGFPAGTIQLLPGRGA 228 (500)
T ss_pred --ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHH----cCCCCCceEEEecCcc
Confidence 1358999999999998 696 5689999999999999999999999999999999986 7 99999999996 44
Q ss_pred hhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC------CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecc
Q 004665 494 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNA 566 (738)
Q Consensus 494 ~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~------~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a 566 (738)
+++..|..||+||+|+||||+.+|+.|++.++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|
T Consensus 229 ~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a 308 (500)
T TIGR01238 229 DVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSA 308 (500)
T ss_pred hHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 67888889999999999999999999988662 6999999999999999999999999999999999988 9999
Q ss_pred cceeEEeccccchHHHHHHHHHHHhcCce----------------------------------ee----cCCc--ccc-c
Q 004665 567 METLLVHKDLACNGALNELVVELQHEGVG----------------------------------LF----GGPR--ASK-L 605 (738)
Q Consensus 567 ~~rvlV~~~i~dd~f~~~l~~~~~~~~~~----------------------------------~~----g~~~--~~~-~ 605 (738)
++|+|||+++| |+|+++|+++++++++. +. ++.+ ..+ +
T Consensus 309 ~~rv~V~~~i~-d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f 387 (500)
T TIGR01238 309 LRVLCVQEDVA-DRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTF 387 (500)
T ss_pred CceeEEcHhhH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCee
Confidence 99999999999 79999999998876321 11 0100 012 2
Q ss_pred c-c-C---CCCCccccCcccceEEEEEeC--CHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC
Q 004665 606 L-Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC 678 (738)
Q Consensus 606 ~-p-v---~~~~i~~eE~FGPVl~v~~~~--~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~ 678 (738)
+ | | +++.+++||+||||++|++|+ ++||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....
T Consensus 388 ~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~ 467 (500)
T TIGR01238 388 VAPTLFELDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGA 467 (500)
T ss_pred EcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCC
Confidence 3 5 3 467889999999999999998 7999999999999999999999999999999999999999999876432
Q ss_pred --CCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 679 --DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 679 --~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
+..||||.|.||+|. +++|++++++||+.|+
T Consensus 468 ~~~~~PfGG~k~SG~G~---~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 468 VVGVQPFGGQGLSGTGP---KAGGPHYLYRLTQVQY 500 (500)
T ss_pred CCCCCCCCccccccCCC---ccCCHHHHHHHHhhcC
Confidence 447999999999862 2579999999999874
No 101
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=2.7e-69 Score=606.66 Aligned_cols=377 Identities=18% Similarity=0.209 Sum_probs=307.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
.+||++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++.+|++++.. ++.. ..+.++++
T Consensus 35 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~----ea~~-------~~~~~~~~ 103 (465)
T PRK15398 35 FASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRV----EDKI-------AKNVAAAE 103 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcH----HHHH-------HHHHHHHH
Confidence 679999999999999999999999999999999999999999999998877755421 2111 12222222
Q ss_pred HHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHH
Q 004665 393 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 470 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~ 470 (738)
.++ +.......... ..+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.+|+
T Consensus 104 ~~~---~~~~~~~~~~~----~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~ 176 (465)
T PRK15398 104 KTP---GVEDLTTEALT----GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAI 176 (465)
T ss_pred Hhc---cccccccCccc----CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHH
Confidence 111 00000011110 1123457788999999999998 695 56799999999999999999999999999999
Q ss_pred HHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHH
Q 004665 471 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 548 (738)
Q Consensus 471 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~ 548 (738)
+++++++.++ +|+|++|+|++ +.+.++.|..||+||+|+||||+++|+.|++ +.+|+++|||||||+||++|||||.
T Consensus 177 ~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-~~k~~~~elGGk~p~IV~~dADld~ 255 (465)
T PRK15398 177 ELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-SGKKAIGAGAGNPPVVVDETADIEK 255 (465)
T ss_pred HHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-cCCceeeecCCCceEEEecCCCHHH
Confidence 9999888888 99999999996 5567777888999999999999999999998 5799999999999999999999999
Q ss_pred HHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHH------------HHhc----C--c-e-eecCCc------
Q 004665 549 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE------------LQHE----G--V-G-LFGGPR------ 601 (738)
Q Consensus 549 Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~------------~~~~----~--~-~-~~g~~~------ 601 (738)
|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ +.++ + . + +.|+..
T Consensus 256 Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~-d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~ 334 (465)
T PRK15398 256 AARDIVKGASFDNNLPCIAEKEVIVVDSVA-DELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA 334 (465)
T ss_pred HHHHHHHhcccCCCCcCCCCceEEEeHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHh
Confidence 99999999999988 999999999999999 7999999883 2211 1 0 1 112211
Q ss_pred ccccc----c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCc--EEEEEecCHHHHHHHHHhcceeEE
Q 004665 602 ASKLL----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVDSAAV 669 (738)
Q Consensus 602 ~~~~~----p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GL--sa~VfT~d~~~a~~~~~~l~~G~V 669 (738)
...++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++++|+|
T Consensus 335 ~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V 414 (465)
T PRK15398 335 AGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIF 414 (465)
T ss_pred CCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEE
Confidence 01122 3 2 4689999999999999999999999999999999998 999999999999999999999999
Q ss_pred EECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEEcC
Q 004665 670 FHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 717 (738)
Q Consensus 670 ~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~ 717 (738)
+||.++. +.+||||.+.|.+ |.+|+.| ...|..|++..+.
T Consensus 415 ~iN~~~~--~~~p~gg~~~s~~-----~~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 415 VKNGPSY--AGLGLGGEGFTTF-----TIATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred EECCCCc--cccCcCCCCCcee-----eecccCC-CCccchhhhhhhe
Confidence 9998753 5678997765543 4568999 9999999987654
No 102
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=1.4e-68 Score=604.46 Aligned_cols=394 Identities=18% Similarity=0.199 Sum_probs=337.0
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 371 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g 371 (738)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++..|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 74 (451)
T cd07103 3 NPATGEVIGEVPDAG------AADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLA-- 74 (451)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 467899999998888 899999999999999999999999999999999999999999999999887765532
Q ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHH
Q 004665 372 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 448 (738)
Q Consensus 372 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 448 (738)
++ ..++..+++.+++++...+. .+...+.. ..+...+.+++|+|||++|+|| ||. +.++++++||
T Consensus 75 --~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (451)
T cd07103 75 --EA--------RGEVDYAASFLEWFAEEARRIYGRTIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPAL 142 (451)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHH
Confidence 21 23566667777666543322 23222211 1234567889999999999997 696 4578999999
Q ss_pred HhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--
Q 004665 449 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 524 (738)
Q Consensus 449 aaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-- 524 (738)
++||+||+|||+.+|.++..+++++++ + ||+|++|+|++ +.+.++.|..|++||+|+||||+.+|++|++.+
T Consensus 143 ~aGN~VIlKps~~~~~~~~~l~~~l~~----aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~ 218 (451)
T cd07103 143 AAGCTVVLKPAEETPLSALALAELAEE----AGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD 218 (451)
T ss_pred HcCCEEEEECCccCcHHHHHHHHHHHH----cCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999986 7 99999999996 456777788899999999999999999998876
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 594 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------- 594 (738)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~ 297 (451)
T cd07103 219 TVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIY-DEFVEKLVERVKKLKVGNGLDEGT 297 (451)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999886532
Q ss_pred --------------------------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHH
Q 004665 595 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 637 (738)
Q Consensus 595 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~ 637 (738)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 377 (451)
T cd07103 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIAR 377 (451)
T ss_pred CCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHH
Confidence 11 122211 12 33 5 2 35789999999999999999999999999
Q ss_pred HHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 638 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 638 aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+|+++|||++||||+|.++++++++++++|.|+||+++...+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 378 ~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 378 ANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLG----REGGKEGLEEYLETKYVS 450 (451)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999998766777899999999886 357999999999999985
No 103
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=1.5e-68 Score=607.03 Aligned_cols=399 Identities=20% Similarity=0.238 Sum_probs=335.7
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQAL-QSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
+.++.+|+.++++...+ .+||++++++|++||+.|+++ |.++|.++|++++++|++++++|++++++|+|++.
T Consensus 20 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~ 93 (473)
T cd07082 20 VYSPIDGEVIGSVPALS------ALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTL 93 (473)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 34567899999998888 889999999999999999998 99999999999999999999999999998887664
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-cccccccccc--CCCceEEEEeeeeeeEEEEeCC-ChH-HHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 443 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 443 (738)
. ++. .|+...++.++++++..+. .+...+.... ..+...+.+++|+|||++|+|| +|+ +.+++
T Consensus 94 ~----~a~--------~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (473)
T cd07082 94 K----DAL--------KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSK 161 (473)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHH
Confidence 3 111 2444455555554432221 1221111000 1234567889999999999997 586 56899
Q ss_pred HHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHH
Q 004665 444 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 521 (738)
Q Consensus 444 ~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~ 521 (738)
+++||++||+||+|||+.+|.++.+|++++++ + +|+|++|++++ +.++++.|..||++|+|+||||+++|+.|+
T Consensus 162 i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~----aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 162 LIPALIMGNTVVFKPATQGVLLGIPLAEAFHD----AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999987 6 99999999996 455688888899999999999999999999
Q ss_pred HhC-CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCce----
Q 004665 522 EST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG---- 595 (738)
Q Consensus 522 ~~a-~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~---- 595 (738)
+.+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|.++++++.+.
T Consensus 238 ~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~~~~ 316 (473)
T cd07082 238 KQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVA-DELVELLKEEVAKLKVGMPWD 316 (473)
T ss_pred HHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCC
Confidence 887 59999999999999999999999999999999999988 999999999999999 79999999999876321
Q ss_pred ------------------------------e-ecCCcccc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHH
Q 004665 596 ------------------------------L-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 636 (738)
Q Consensus 596 ------------------------------~-~g~~~~~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~ 636 (738)
+ .|+....+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 317 ~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~ 396 (473)
T cd07082 317 NGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIE 396 (473)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHH
Confidence 1 12221112 22 5 2 3578999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 637 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 637 ~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
++|+++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.|.||+| +++|++|+++||+.|++++
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g----~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 397 LANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG----TQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC----CCChHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999997644 356899999999987 3579999999999999875
No 104
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.3e-69 Score=561.80 Aligned_cols=383 Identities=20% Similarity=0.224 Sum_probs=331.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHH
Q 004665 315 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 394 (738)
Q Consensus 315 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 394 (738)
.+++.++++|.+|.+-++.|.+.|...|+++...+++|.++|.+++.+|+.+++. ++...++....+++.++++.+
T Consensus 3 ~~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~----es~~~Ev~~~~~~i~~~l~~L 78 (477)
T KOG2456|consen 3 AISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPEL----ESYLNEVGYVLNEIRYALENL 78 (477)
T ss_pred cHHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchh----HHHHHHHHHHHHHHHHHHHhh
Confidence 3566689999999999999999999999999999999999999999999988754 566677778889999999999
Q ss_pred HHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHH
Q 004665 395 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 472 (738)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l 472 (738)
+.|+...+.. .... +. -.+.+++.+|+|||++|+|| ||+ +++.++++||||||+||+||||.+|.++.+|+++
T Consensus 79 ~~wv~~~~v~-~~~~--t~--~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakl 153 (477)
T KOG2456|consen 79 PEWVKPEPVK-KSFL--TF--LDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKL 153 (477)
T ss_pred HHhccccccC-cccc--cc--cCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHH
Confidence 9998633211 1111 11 12467889999999999998 685 6789999999999999999999999999999999
Q ss_pred HHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHHH
Q 004665 473 ITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDV 548 (738)
Q Consensus 473 ~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld~ 548 (738)
+.+ +|+++++.||.| .+++.++|.+ ++|+|+||||+.+||.||.+| .+||+||||||+|++|++|||++.
T Consensus 154 lp~----Yld~~~~~VV~Ggv~ETt~LL~~--rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~i 227 (477)
T KOG2456|consen 154 LPQ----YLDQDLIRVVNGGVPETTELLKQ--RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKI 227 (477)
T ss_pred HHH----hcCcceEEEecCCCchHHHHHHh--hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHH
Confidence 986 599999999995 5788898874 799999999999999999887 399999999999999999999999
Q ss_pred HHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhc-Cc----------------------------e-ee
Q 004665 549 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-GV----------------------------G-LF 597 (738)
Q Consensus 549 Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~-~~----------------------------~-~~ 597 (738)
|+++|+|+++.|+| +|+|+++|+++.+++ +.|+++++..+++. |- + ..
T Consensus 228 a~~RI~~gk~~N~GQtCvapDYiL~~k~~~-~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~~ 306 (477)
T KOG2456|consen 228 AARRIAWGKWMNSGQTCVAPDYILCSKSIQ-PKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVAI 306 (477)
T ss_pred HHHHHHHHhhccCCCeeccCCeEEecHhhh-HHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCceec
Confidence 99999999999998 999999999999999 89999999888764 11 0 12
Q ss_pred cCCccc--ccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeE
Q 004665 598 GGPRAS--KLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA 668 (738)
Q Consensus 598 g~~~~~--~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~ 668 (738)
|+.... .++ | | .++++|+||+|||||||+.|+|+||+|..+|+.+.+|++|+||+|.+...||.+++.+|.
T Consensus 307 Gg~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGg 386 (477)
T KOG2456|consen 307 GGESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGG 386 (477)
T ss_pred CCccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCC
Confidence 332221 123 4 2 367999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCC--CCCCCcccCccccccccccccccchhHHhhcceeeEEEEcC
Q 004665 669 VFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 717 (738)
Q Consensus 669 V~iN~~~~--~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~ 717 (738)
|.+|+... ....+||||.++||+| ++||.+|++.|+|.|++..+.
T Consensus 387 vt~ND~i~H~~~~~lPFGGVG~SGmG----~YhGK~sFdTFSH~k~~l~rs 433 (477)
T KOG2456|consen 387 VTVNDVIMHVTLDSLPFGGVGESGMG----RYHGKFSFDTFSHEKSCLLRS 433 (477)
T ss_pred eeecceEEEEEeeccCcCCcCccccc----cccccccccccccchhhhhcc
Confidence 99999654 3467899999999886 468999999999999987653
No 105
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=2.3e-68 Score=599.65 Aligned_cols=377 Identities=21% Similarity=0.241 Sum_probs=319.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHH
Q 004665 315 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 394 (738)
Q Consensus 315 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 394 (738)
|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+|++.. ++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRP----KA--------AFEVGAAIAIL 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999999888765432 11 23566666777
Q ss_pred HHHhhccc-cccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHH-HHHHH
Q 004665 395 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRS-NAILH 470 (738)
Q Consensus 395 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t-~~~l~ 470 (738)
++++...+ ..+...+.. ..+...+.+++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.+ +..|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~ 146 (431)
T cd07104 69 REAAGLPRRPEGEILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA 146 (431)
T ss_pred HHHHHHHHHhcCccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH
Confidence 66654432 222222211 1344567889999999999997 686 567999999999999999999999998 56788
Q ss_pred HHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC---CcEEEecCCcCeEEEcCCCC
Q 004665 471 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSAN 545 (738)
Q Consensus 471 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dAD 545 (738)
+++.+ + +|+|++|+|++ +.+++..|..||++|+|+||||+.+|+.|+++++ +|+++|||||||+||++|||
T Consensus 147 ~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 222 (431)
T cd07104 147 EIFEE----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDAD 222 (431)
T ss_pred HHHHH----cCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCC
Confidence 88876 7 99999999996 4557788888999999999999999999988763 89999999999999999999
Q ss_pred HHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc------------------------------
Q 004665 546 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------ 594 (738)
Q Consensus 546 ld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~------------------------------ 594 (738)
++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 223 l~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~ 301 (431)
T cd07104 223 LDLAVSAAAFGAFLHQGQICMAAGRILVHESVY-DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAV 301 (431)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999988 999999999999999 7999999999887632
Q ss_pred ----ee-ecCCcccccc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHH
Q 004665 595 ----GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 662 (738)
Q Consensus 595 ----~~-~g~~~~~~~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~ 662 (738)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus 302 ~~G~~~~~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 381 (431)
T cd07104 302 AAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAE 381 (431)
T ss_pred HCCCEEEeCCCCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 01 1222111123 5 2 357899999999999999999999999999999999999999999999999999
Q ss_pred hcceeEEEECCCCCCC-CCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 663 QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 663 ~l~~G~V~iN~~~~~~-~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
++++|.|+||+++... +.+||||.|.||+| +++|++|+++||+.|+++
T Consensus 382 ~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 382 RLETGMVHINDQTVNDEPHVPFGGVKASGGG----RFGGPASLEEFTEWQWIT 430 (431)
T ss_pred hcCcCeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceeEEe
Confidence 9999999999987554 57899999999875 357999999999999985
No 106
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=1.7e-68 Score=622.58 Aligned_cols=396 Identities=17% Similarity=0.168 Sum_probs=325.4
Q ss_pred HHHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 290 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 290 i~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
+.++.+|+.++++...+ . ||++|+++|++| |+.|+++|.++|.++|++++++|++|+++|++ +++|.||+.
T Consensus 19 v~nP~tg~~i~~~~~~~------~-dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~ 90 (663)
T TIGR02278 19 VRDASTGEVLARVTSEG------L-DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATR 90 (663)
T ss_pred ccCCCCCCEEEEEcCCc------H-HHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCH
Confidence 34577899999987666 4 899999999996 99999999999999999999999999999998 466655442
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc---------ccccccccccCCCceEEEEeeee-eeEEEEeCC-Ch
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RP 437 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P 437 (738)
. + +..|+..+++.++++++..+. .|+..+.. ...+...+++|+|+ |||++|+|| ||
T Consensus 91 ~----~--------a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN~P 157 (663)
T TIGR02278 91 R----D--------NWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFNFP 157 (663)
T ss_pred H----H--------HHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCchH
Confidence 1 2 124677888888888764432 12222210 01122457889998 999999998 59
Q ss_pred H-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHH
Q 004665 438 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNK 515 (738)
Q Consensus 438 ~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~ 515 (738)
+ ++.++++|||++||+||+|||+.||+++.+|++++.++ . ||+|++|+|+|. .+.++..++++|+|+||||++
T Consensus 158 ~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~a---G~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 158 VWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVES---GLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh---CCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHH
Confidence 6 56899999999999999999999999999999999873 4 899999999963 233444446799999999999
Q ss_pred HHHHHHHhC-----CCcEEEecCCcCeEEEcCCCC-----HHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHH
Q 004665 516 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNE 584 (738)
Q Consensus 516 ~g~~i~~~a-----~~p~~lElGGk~p~iV~~dAD-----ld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~ 584 (738)
+|++|++.+ .+|+++|||||||+||++||| +|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~ 311 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALL-EAVLKA 311 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHH-HHHHHH
Confidence 999998853 389999999999999999999 99999999999999988 999999999999999 799999
Q ss_pred HHHHHHhcCc----------------------------------ee-ecCCcc-cc-cc-c-C-----CCC-CccccCcc
Q 004665 585 LVVELQHEGV----------------------------------GL-FGGPRA-SK-LL-Q-I-----PET-RLFHHEYN 619 (738)
Q Consensus 585 l~~~~~~~~~----------------------------------~~-~g~~~~-~~-~~-p-v-----~~~-~i~~eE~F 619 (738)
|+++++++.+ ++ .|+... .+ ++ | | ++| .+++||+|
T Consensus 312 l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 312 LQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999987632 11 233221 13 33 5 2 244 68999999
Q ss_pred cceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhc--ceeEEEE-CCCC--------CCCCCCcccCccc
Q 004665 620 SMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFH-NAST--------RFCDGARFGLGAE 688 (738)
Q Consensus 620 GPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l--~~G~V~i-N~~~--------~~~~~~pfGgg~~ 688 (738)
|||++|++|+|+||||+++|+++|||++||||+|.++++++++++ ++|+||| |.+. ...+.+||||.|.
T Consensus 392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~ 471 (663)
T TIGR02278 392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR 471 (663)
T ss_pred CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999 8999999 6421 1125689999999
Q ss_pred cccccccccc-cchhHHhhcceeeEEEEc
Q 004665 689 VGISTSRIHA-RGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 689 sG~~~~~~~~-~G~~g~~~ft~~K~v~~~ 716 (738)
||+|+ + +|.+++++||+.|+|..-
T Consensus 472 SG~G~----~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 472 AGGGE----ELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred CcCCC----ccchHHHHHHhceeEEEEcC
Confidence 99863 4 367999999999998654
No 107
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=2.4e-68 Score=605.14 Aligned_cols=391 Identities=18% Similarity=0.202 Sum_probs=320.0
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
.++.+|+.++++.. . .+|+++|+++|++| |+.|+++|+++|+++|++++++|++|+++|+++ ++|+||+..
T Consensus 20 ~nP~tg~~~~~~~~-~------~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ 91 (513)
T cd07128 20 HDAVTGEVVARVSS-E------GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRR 91 (513)
T ss_pred ECCCCCCEEEEEcC-C------HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHH
Confidence 45678999998865 4 45899999999998 799999999999999999999999999999985 666655421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc---------cccccccccCCC-ceEEEEeee-eeeEEEEeCC-Ch
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI---------GQILKRTELADG-LILEKTSCP-LGVLLIVFES-RP 437 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~P-lGVV~~I~p~-~P 437 (738)
++ ..|+..+++.++++++..+.. ++..+.. ..+ ...+++++| +|||++|+|| ||
T Consensus 92 ----ea--------~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~pwN~P 157 (513)
T cd07128 92 ----DS--------WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLS--KDGTFVGQHILTPRRGVAVHINAFNFP 157 (513)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccC--CCccccceEEEEecccEEEEECCcccH
Confidence 22 235666666677666543221 1111110 011 134577999 5999999998 69
Q ss_pred H-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCC-ChhhHhhhcCCCcCEEEeecCH
Q 004665 438 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSN 514 (738)
Q Consensus 438 ~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~-~~~~~~l~~~~~vd~V~fTGS~ 514 (738)
+ +.+++++|||++||+||+|||+.||+++.+|++++.++ . ||+|++|+|+|. ..+++.+ +.+|+|+||||+
T Consensus 158 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---G~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~ 231 (513)
T cd07128 158 VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVES---GLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSA 231 (513)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CCCCCCcEEEecCChHHHhccc---CCCCEEEEECCH
Confidence 5 56899999999999999999999999999999999973 4 799999999963 3333333 469999999999
Q ss_pred HHHHHHHHhC-----CCcEEEecCCcCeEEEcCCCC-----HHHHHHHHHHHccccCc-eecccceeEEeccccchHHHH
Q 004665 515 KLVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALN 583 (738)
Q Consensus 515 ~~g~~i~~~a-----~~p~~lElGGk~p~iV~~dAD-----ld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~ 583 (738)
++|++|++.+ .+|+++|||||||+||++||| +|.|++.+++++|.|+| +|++++|+|||+++| |+|++
T Consensus 232 ~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~ 310 (513)
T cd07128 232 ATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARV-DAVIE 310 (513)
T ss_pred HHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHH-HHHHH
Confidence 9999999863 389999999999999999999 99999999999999988 999999999999999 79999
Q ss_pred HHHHHHHhcCc---------------------------------ee-ecCCcc---------cc-cc-c-C-----C--C
Q 004665 584 ELVVELQHEGV---------------------------------GL-FGGPRA---------SK-LL-Q-I-----P--E 610 (738)
Q Consensus 584 ~l~~~~~~~~~---------------------------------~~-~g~~~~---------~~-~~-p-v-----~--~ 610 (738)
+|+++++++.+ ++ .|+... .+ |+ | | + .
T Consensus 311 ~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 390 (513)
T cd07128 311 ALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAA 390 (513)
T ss_pred HHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCccc
Confidence 99999987632 11 244321 13 33 5 2 2 2
Q ss_pred CCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcc--eeEEEECCCCC---------CCC
Q 004665 611 TRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR---------FCD 679 (738)
Q Consensus 611 ~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~--~G~V~iN~~~~---------~~~ 679 (738)
+.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|+||||.... ..+
T Consensus 391 ~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~ 470 (513)
T cd07128 391 TAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLP 470 (513)
T ss_pred chHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCC
Confidence 6889999999999999999999999999999999999999999999999999997 99999998641 235
Q ss_pred CCcccCccccccccccccc-cchhHHhhcceeeEEE
Q 004665 680 GARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWIL 714 (738)
Q Consensus 680 ~~pfGgg~~sG~~~~~~~~-~G~~g~~~ft~~K~v~ 714 (738)
.+||||.|.||+|+ + +|.+|+++|++.|+|.
T Consensus 471 ~~pfGG~k~SG~G~----~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 471 QLVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCCcccCCCCc----ccccHHHHHHhheeeeee
Confidence 68999999999863 3 3699999999999974
No 108
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-67 Score=600.86 Aligned_cols=394 Identities=16% Similarity=0.171 Sum_probs=322.7
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-RRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
.++.+|+.++++.. . .+||++|+++|++|| +.|+++|+++|+++|++++++|++|+++|++++++|.||+..
T Consensus 24 ~nP~tge~l~~v~~-~------~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~ 96 (521)
T PRK11903 24 FDPVTGEELVRVSA-T------GLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRN 96 (521)
T ss_pred ECCCCCCEEEEecC-C------hHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45678999999874 6 779999999999995 999999999999999999999999999999998877655421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccc-c-c----cCCCceEEEEeee-eeeEEEEeCC-ChH-H
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKR-T-E----LADGLILEKTSCP-LGVLLIVFES-RPD-A 439 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~-~-~----~~~~~~~~~~~~P-lGVV~~I~p~-~P~-~ 439 (738)
+ ...|+..+++.+++++++.+.. +..... . . .......++.++| +|||++|+|| ||+ +
T Consensus 97 ----~--------a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~ 164 (521)
T PRK11903 97 ----D--------SAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWG 164 (521)
T ss_pred ----H--------HHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHH
Confidence 2 1346777888888877644322 111100 0 0 0011224567899 6999999998 596 5
Q ss_pred HHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHH
Q 004665 440 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 517 (738)
Q Consensus 440 ~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g 517 (738)
+.++++|||++||+||+|||+.||.++..|++++.++ . ||+|++|+|+| ++++.+.| +++|+|+||||+++|
T Consensus 165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---g~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G 238 (521)
T PRK11903 165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAA---GILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETA 238 (521)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHh---CCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHH
Confidence 6789999999999999999999999999999999873 4 89999999996 44454444 689999999999999
Q ss_pred HHHHHhC-----CCcEEEecCCcCeEEEcCCCC-----HHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHH
Q 004665 518 SQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELV 586 (738)
Q Consensus 518 ~~i~~~a-----~~p~~lElGGk~p~iV~~dAD-----ld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~ 586 (738)
++|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+
T Consensus 239 ~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~ 317 (521)
T PRK11903 239 AVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALY-DAVAEALA 317 (521)
T ss_pred HHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHH-HHHHHHHH
Confidence 9998853 389999999999999999999 59999999999999988 999999999999999 79999999
Q ss_pred HHHHhcCc---------------------------------ee-ecCCc--------ccc-cc-c-C-----C--CCCcc
Q 004665 587 VELQHEGV---------------------------------GL-FGGPR--------ASK-LL-Q-I-----P--ETRLF 614 (738)
Q Consensus 587 ~~~~~~~~---------------------------------~~-~g~~~--------~~~-~~-p-v-----~--~~~i~ 614 (738)
++++++.+ ++ .|+.. ..+ ++ | | + ++.++
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~ 397 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVH 397 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHH
Confidence 99987632 11 23322 113 33 5 2 2 25788
Q ss_pred ccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhc--ceeEEEECCCCC---------CCCCCcc
Q 004665 615 HHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTR---------FCDGARF 683 (738)
Q Consensus 615 ~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l--~~G~V~iN~~~~---------~~~~~pf 683 (738)
+||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++ ++|+|+||+++. ..+.+||
T Consensus 398 ~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~Pf 477 (521)
T PRK11903 398 DVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLH 477 (521)
T ss_pred hCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 999999997532 2346899
Q ss_pred cCccccccccccccc-cchhHHhhcceeeEEE
Q 004665 684 GLGAEVGISTSRIHA-RGPVGVEGLLTTRWIL 714 (738)
Q Consensus 684 Ggg~~sG~~~~~~~~-~G~~g~~~ft~~K~v~ 714 (738)
||.|.||+|+ + +|.+++++||+.|+|.
T Consensus 478 GG~k~SG~Gr----~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 478 GGPGRAGGGE----ELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred CCCCcCcCCc----ccccHHHHHHHhccceee
Confidence 9999999863 3 3589999999987764
No 109
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=1.3e-67 Score=588.50 Aligned_cols=381 Identities=15% Similarity=0.176 Sum_probs=298.8
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH--H
Q 004665 316 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK--S 393 (738)
Q Consensus 316 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~--~ 393 (738)
+++|+++|++||+.|+++|+++|.++|++++++|++|+++|++++++|+||+.. ++.. ++...+. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~----ea~~--------~~~~~~~~~~ 68 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRV----EDKV--------IKNHFAAEYI 68 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChH----HHHH--------HHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999988776532 2211 1222222 1
Q ss_pred HHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHH
Q 004665 394 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 471 (738)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~ 471 (738)
.++++.. ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|||++||+||+||||+||+++.++++
T Consensus 69 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 143 (439)
T cd07081 69 YNVYKDE--KTCGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143 (439)
T ss_pred HHHHhcc--ccCceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHH
Confidence 2333321 11222211 1123457899999999999998 695 568999999999999999999999999999999
Q ss_pred HHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHH
Q 004665 472 VITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 549 (738)
Q Consensus 472 l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~A 549 (738)
++++++.++ +|+|+||+|++ +.++++.|..||+|++|+||||+++.+..++ ..||+++|||||||+||++|||+|.|
T Consensus 144 l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~A 222 (439)
T cd07081 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRA 222 (439)
T ss_pred HHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHH
Confidence 999888889 99999999996 5567888889999999999999997665543 36899999999999999999999999
Q ss_pred HHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHh-------------------cCceeecCCc-----ccc
Q 004665 550 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-------------------EGVGLFGGPR-----ASK 604 (738)
Q Consensus 550 a~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~-------------------~~~~~~g~~~-----~~~ 604 (738)
++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|++++.- .|..+.|+.. ..+
T Consensus 223 a~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G 301 (439)
T cd07081 223 VQSIVKSKTFDNGVICASEQSVIVVDSVY-DEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAG 301 (439)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEcHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcC
Confidence 9999999999988 999999999999999 7999999886411 1223333321 012
Q ss_pred -cc-c----C-------CCCCccccCcccceEEEEEeCCHHHHHHHHHcC----CCCcEEEEEecC---HHHHHHHHHhc
Q 004665 605 -LL-Q----I-------PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAED---QKVAETFLCQV 664 (738)
Q Consensus 605 -~~-p----v-------~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~----~~GLsa~VfT~d---~~~a~~~~~~l 664 (738)
++ | + ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++
T Consensus 302 ~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l 381 (439)
T cd07081 302 LKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAM 381 (439)
T ss_pred CccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhC
Confidence 11 2 1 468999999999999999999999999999976 799999999999 99999999999
Q ss_pred ceeEEEECCCCCCC---CCCcccCccccccccccccccc---hhHHhhcceeeEEEE
Q 004665 665 DSAAVFHNASTRFC---DGARFGLGAEVGISTSRIHARG---PVGVEGLLTTRWILR 715 (738)
Q Consensus 665 ~~G~V~iN~~~~~~---~~~pfGgg~~sG~~~~~~~~~G---~~g~~~ft~~K~v~~ 715 (738)
++|+|+||.++... ...-||+...+-+|++.....+ ..+.++|+++|.+.+
T Consensus 382 ~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 382 KTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 99999999766221 1122433333323222211112 246889999998765
No 110
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=4.4e-67 Score=630.72 Aligned_cols=428 Identities=19% Similarity=0.178 Sum_probs=353.0
Q ss_pred HHHHHHHHHHHHcCCc--EEEEeCc-cchhHHHhhcCc-eeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHH
Q 004665 263 TAKVNAAYCAACAGIP--VVITSGF-AMDSIIKVLEGK-RVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDR 338 (738)
Q Consensus 263 ~~Kl~aa~~a~~~gi~--v~I~~g~-~~~~i~~~~tg~-~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R 338 (738)
..++.++....+.... -.|++|. ....+.++.+++ .+|++..++ .++|++|+++|++||+.|+++|.++|
T Consensus 536 ~~~~~~al~~~~~~~~~~~~~i~g~~~~~~v~nP~~~~~~vg~v~~a~------~~~v~~Ai~aA~~A~~~W~~~~~~~R 609 (1038)
T PRK11904 536 LEPLAAAIAAFLEKQWQAGPIINGEGEARPVVSPADRRRVVGEVAFAD------AEQVEQALAAARAAFPAWSRTPVEER 609 (1038)
T ss_pred HHHHHHHHHHHHhcCceecceEcCCCCeEEEECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 4556666665655432 2334661 112455677876 789999988 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCc
Q 004665 339 RKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGL 417 (738)
Q Consensus 339 ~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 417 (738)
+++|++++++|++++++|+.++++|.||+.. ++ ..++..+++.+++++...+.. +..... ..+.+.
T Consensus 610 a~iL~kaAdll~~~~~eL~~l~~~E~GK~~~----~a--------~~EV~eaid~lr~ya~~a~~~~~~~~~l-~g~~ge 676 (1038)
T PRK11904 610 AAILERAADLLEANRAELIALCVREAGKTLQ----DA--------IAEVREAVDFCRYYAAQARRLFGAPEKL-PGPTGE 676 (1038)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHHHHHHHHHHHhhCCCccc-CCCCCc
Confidence 9999999999999999999999877765432 22 346778888888887554322 221110 012345
Q ss_pred eEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CC
Q 004665 418 ILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE 493 (738)
Q Consensus 418 ~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~ 493 (738)
..+..++|+|||++|+|| ||+ +..+++++||++||+||+|||++||+++..+.+++++ + +|+|++|+|+| +.
T Consensus 677 ~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e----AGlP~gvl~lv~G~g~ 752 (1038)
T PRK11904 677 SNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE----AGIPKDVLQLLPGDGA 752 (1038)
T ss_pred eeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH----hCcCcceEEEeeCCch
Confidence 567889999999999998 696 5679999999999999999999999999999999987 7 99999999996 55
Q ss_pred hhhHhhhcCCCcCEEEeecCHHHHHHHHHhC------CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecc
Q 004665 494 EIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNA 566 (738)
Q Consensus 494 ~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a------~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a 566 (738)
+++..|..||+|++|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||+|+|++.+++|+|.|+| .|+|
T Consensus 753 ~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA 832 (1038)
T PRK11904 753 TVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSA 832 (1038)
T ss_pred HHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCcccc
Confidence 6888899999999999999999999997664 26999999999999999999999999999999999988 9999
Q ss_pred cceeEEeccccchHHHHHHHHHHHhcCce---------------------------------e-ecCCcc----cccc--
Q 004665 567 METLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPRA----SKLL-- 606 (738)
Q Consensus 567 ~~rvlV~~~i~dd~f~~~l~~~~~~~~~~---------------------------------~-~g~~~~----~~~~-- 606 (738)
.+|+|||++|| |+|+++|+++++++.+. + .|+... .++|
T Consensus 833 ~~rl~V~~si~-d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~ 911 (1038)
T PRK11904 833 LRVLFVQEDIA-DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFVA 911 (1038)
T ss_pred CcEEEEeHHHH-HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEEe
Confidence 99999999999 79999999999876431 1 122211 1333
Q ss_pred c-C---CCCCccccCcccceEEEEEeC--CHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC--
Q 004665 607 Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-- 678 (738)
Q Consensus 607 p-v---~~~~i~~eE~FGPVl~v~~~~--~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~-- 678 (738)
| | +++.+++||+||||++|++|+ ++||||+++|+++|||+++|||+|.+++.++++++++|+||||+.....
T Consensus 912 PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~v 991 (1038)
T PRK11904 912 PTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVV 991 (1038)
T ss_pred eEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCC
Confidence 5 3 457789999999999999998 7999999999999999999999999999999999999999999875543
Q ss_pred CCCcccCccccccccccccccchhHHhhcceeeEEEEcC
Q 004665 679 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 717 (738)
Q Consensus 679 ~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~ 717 (738)
...||||.+.||.|. +.+|++++++|++.|+|+++.
T Consensus 992 g~qPFGG~~~SG~G~---kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 992 GVQPFGGQGLSGTGP---KAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred CCCCCCCCCCCCCCC---ccchHHHHHHHhceEEEEEcc
Confidence 346999999998862 256899999999999998864
No 111
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=3.5e-67 Score=587.48 Aligned_cols=378 Identities=22% Similarity=0.259 Sum_probs=310.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHH
Q 004665 318 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 397 (738)
Q Consensus 318 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~ 397 (738)
+++++|++||+.|+++|+.+|.++|++++++|++|+++|+++++.|+|++.. ++...++..+...++++++.++.+
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----~~~~~Ev~~~~~~~~~~~~~~~~~ 77 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPA----EAYLTEIAVVLGEIDHALKHLKKW 77 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999999999999999888766521 221122222233333333333322
Q ss_pred hhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHh
Q 004665 398 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 475 (738)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~ 475 (738)
... +... .+.. ..+...+.+++|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|.++.+|++++++
T Consensus 78 ~~~-~~~~--~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~ 152 (426)
T cd07087 78 MKP-RRVS--VPLL--LQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK 152 (426)
T ss_pred hCC-cccC--Cccc--cCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 210 0000 0000 1123457889999999999997 686 5689999999999999999999999999999999986
Q ss_pred hCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHHHHHHH
Q 004665 476 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNI 552 (738)
Q Consensus 476 al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld~Aa~~ 552 (738)
.+|+|++|+|+|+.+.+..|..|| +|+|+||||+++|++|++.+ .+|+++|||||||+||++|||+|.|++.
T Consensus 153 ----~~P~gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~ 227 (426)
T cd07087 153 ----YFDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARR 227 (426)
T ss_pred ----hCCCCEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHH
Confidence 499999999997555567777788 99999999999999998877 4899999999999999999999999999
Q ss_pred HHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----------------------------e-eecCCcc
Q 004665 553 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGPRA 602 (738)
Q Consensus 553 iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~----------------------------~-~~g~~~~ 602 (738)
+++++|.|+| .|+|++|+|||+++| |+|+++|++.++++.. + +.|+...
T Consensus 228 i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~~~ 306 (426)
T cd07087 228 IAWGKFLNAGQTCIAPDYVLVHESIK-DELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQVD 306 (426)
T ss_pred HHHHHHhccCCccccCCEEEEcHHHH-HHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCccC
Confidence 9999999988 999999999999999 7999999999877521 0 1122211
Q ss_pred -cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECC
Q 004665 603 -SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNA 673 (738)
Q Consensus 603 -~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~ 673 (738)
.+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+
T Consensus 307 ~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~ 386 (426)
T cd07087 307 KEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVND 386 (426)
T ss_pred CCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECC
Confidence 12 33 5 2 36889999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC--CCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 674 STR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 674 ~~~--~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+.. ..+..||||.|.||+| +++|.+|+++||+.|+++
T Consensus 387 ~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 387 VLLHAAIPNLPFGGVGNSGMG----AYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccccCCCCCCCCCCCcccCC----CccCHHHHHHhccceeec
Confidence 753 2367899999999986 357999999999999874
No 112
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=1.7e-67 Score=584.74 Aligned_cols=353 Identities=19% Similarity=0.199 Sum_probs=299.2
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccc-cccccccccCCCceEE
Q 004665 342 LLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILE 420 (738)
Q Consensus 342 L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 420 (738)
|++++++|++|+++|++++++|+||+.. ++ ..|+..+++.+++++.+.+.. +...+. ...+...+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea--------~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~ 66 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQ----LA--------EVEVAFTADYIDYMAEWARRYEGEIIQS--DRPGENIL 66 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHH----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccCC--CCCCceeE
Confidence 5799999999999999999888766532 22 235666777777776654322 222211 11234567
Q ss_pred EEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhh
Q 004665 421 KTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIP 496 (738)
Q Consensus 421 ~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~ 496 (738)
++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.+|.|+..+++++.+ + ||+|++|+|+| +.+++
T Consensus 67 ~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~ 142 (409)
T PRK10090 67 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPKGVFNLVLGRGETVG 142 (409)
T ss_pred EEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----cCCCcccEEEEeCCChhHH
Confidence 889999999999998 686 5679999999999999999999999999999999986 7 99999999997 56778
Q ss_pred HhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEE
Q 004665 497 DLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLV 572 (738)
Q Consensus 497 ~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV 572 (738)
..|..||+||+|+||||+.+|+.|++++ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+||
T Consensus 143 ~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V 222 (409)
T PRK10090 143 QELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYV 222 (409)
T ss_pred HHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEE
Confidence 8888999999999999999999998876 38999999999999999999999999999999999988 9999999999
Q ss_pred eccccchHHHHHHHHHHHhcCc-----------------------------------ee-ecCCcc--cc-cc-c-C---
Q 004665 573 HKDLACNGALNELVVELQHEGV-----------------------------------GL-FGGPRA--SK-LL-Q-I--- 608 (738)
Q Consensus 573 ~~~i~dd~f~~~l~~~~~~~~~-----------------------------------~~-~g~~~~--~~-~~-p-v--- 608 (738)
|+++| |+|+++|+++++++.. ++ .|+.+. .+ ++ | |
T Consensus 223 ~~~i~-~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~ 301 (409)
T PRK10090 223 QKGIY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLD 301 (409)
T ss_pred cHHHH-HHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeC
Confidence 99999 7999999999987632 01 122221 12 33 5 2
Q ss_pred --CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCc
Q 004665 609 --PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLG 686 (738)
Q Consensus 609 --~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg 686 (738)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.
T Consensus 302 v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~ 381 (409)
T PRK10090 302 VRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGW 381 (409)
T ss_pred CCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCc
Confidence 368999999999999999999999999999999999999999999999999999999999999998766666799999
Q ss_pred cccccccccccccchhHHhhcceeeEEEEcC
Q 004665 687 AEVGISTSRIHARGPVGVEGLLTTRWILRGN 717 (738)
Q Consensus 687 ~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~ 717 (738)
|+||+| +++|.+|+++||+.|++++.+
T Consensus 382 k~SG~G----~~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 382 RKSGIG----GADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred ccccCC----ccchHHHHHHhcceEEEEEec
Confidence 999986 367999999999999997753
No 113
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=4.2e-67 Score=587.36 Aligned_cols=378 Identities=19% Similarity=0.215 Sum_probs=310.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHH
Q 004665 318 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 397 (738)
Q Consensus 318 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~ 397 (738)
+++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+|++.. ++...++......+++++..++.+
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea~~~ev~~~~~~~~~~~~~~~~~ 77 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAA----EVDLTEILPVLSEINHAIKHLKKW 77 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999988876532 221122222233334333333322
Q ss_pred hhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHh
Q 004665 398 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 475 (738)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~ 475 (738)
... ...+......+...++.|+|+|||++|+|| ||. +.+++++|||++||+||+|||+.+|.++.++++++++
T Consensus 78 ~~~-----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~ 152 (433)
T cd07134 78 MKP-----KRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE 152 (433)
T ss_pred hCC-----cccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 110 111100001233467899999999999998 696 5679999999999999999999999999999999986
Q ss_pred hCCCccCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC---CcEEEecCCcCeEEEcCCCCHHHHHHH
Q 004665 476 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNI 552 (738)
Q Consensus 476 al~~alP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dADld~Aa~~ 552 (738)
++|+|++|+++++.+.+..|.+|| +++|+||||+.+|+.|++.+. +|+++|||||||+||++|||++.|++.
T Consensus 153 ----a~p~g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~ 227 (433)
T cd07134 153 ----AFDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKK 227 (433)
T ss_pred ----hCCcCEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHH
Confidence 489999999997556777777787 999999999999999998763 899999999999999999999999999
Q ss_pred HHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc-----------------------------------ee
Q 004665 553 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-----------------------------------GL 596 (738)
Q Consensus 553 iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-----------------------------------~~ 596 (738)
+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.. ++
T Consensus 228 i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~ 306 (433)
T cd07134 228 IAWGKFLNAGQTCIAPDYVFVHESVK-DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKV 306 (433)
T ss_pred HHHHhhcCcCCcccCCcEEEECHHHH-HHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999988 999999999999999 7999999998886411 00
Q ss_pred -ecCCcc-cc-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcce
Q 004665 597 -FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 666 (738)
Q Consensus 597 -~g~~~~-~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~ 666 (738)
.|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 307 ~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 386 (433)
T cd07134 307 EFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSS 386 (433)
T ss_pred EeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCc
Confidence 122111 12 22 5 2 3678999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEECCCCCC--CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 667 AAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 667 G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
|.|+||..+.. .+..||||.|.||+| +++|++|+++||+.|+|.
T Consensus 387 g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 387 GGVVVNDVVLHFLNPNLPFGGVNNSGIG----SYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ceEEECCcccccCCCCCCCCCcCcccCC----CcCcHHHHHHhcccceee
Confidence 99999987543 356899999999986 357999999999999874
No 114
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-67 Score=614.34 Aligned_cols=394 Identities=18% Similarity=0.206 Sum_probs=321.1
Q ss_pred HHhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 004665 291 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 369 (738)
Q Consensus 291 ~~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~ 369 (738)
.++.+|+.++++...+ . |+++|+++|++| |+.|+++|+.+|+++|++++++|++|+++|++ ++.|+||+..
T Consensus 24 ~nP~tg~~i~~~~~~~------~-dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~ 95 (675)
T PRK11563 24 HDAVTGEPVARVSSEG------L-DFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRR 95 (675)
T ss_pred cCCCCCCEEEEEcCCc------H-HHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHH
Confidence 4567899999987654 3 899999999998 79999999999999999999999999999998 4666554421
Q ss_pred hchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-c--------cccccccccCCCceEEEEeeee-eeEEEEeCC-ChH
Q 004665 370 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-I--------GQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD 438 (738)
Q Consensus 370 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~ 438 (738)
++ ..|+...++.+++++...+. . ++..+.. .......+..++|+ |||++|+|| ||+
T Consensus 96 ----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~GVv~~I~PwNfP~ 162 (675)
T PRK11563 96 ----DS--------WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS-KGGTFAGRHILTPLEGVAVHINAFNFPV 162 (675)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHhhhccccccccCCcccccc-CCCcccceEEEeecCceEEEECCCchHH
Confidence 21 23566667777776654321 1 2222110 01112246788997 999999998 595
Q ss_pred -HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHH
Q 004665 439 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKL 516 (738)
Q Consensus 439 -~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~ 516 (738)
+.+++++|||++||+||+||||.||+++.+|++++.++ . +|+|++|+|+|. .+.++..++++++|+||||+++
T Consensus 163 ~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~ea---G~~P~gv~~vv~g~--~~~~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 163 WGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVES---GLLPEGALQLICGS--AGDLLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHc---CCCCCCcEEEeeCC--HHHHhhcCCCCCEEEEECcHHH
Confidence 56899999999999999999999999999999999973 4 899999999963 2334555568999999999999
Q ss_pred HHHHHHhC-----CCcEEEecCCcCeEEEcCCCC-----HHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHH
Q 004665 517 VSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNEL 585 (738)
Q Consensus 517 g~~i~~~a-----~~p~~lElGGk~p~iV~~dAD-----ld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l 585 (738)
|++|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l 316 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALV-DAVIEAL 316 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHH-HHHHHHH
Confidence 99998742 489999999999999999995 99999999999999988 999999999999999 7999999
Q ss_pred HHHHHhcCc---------------------------------e-eecCCc---------ccccc--c-C-----C--CCC
Q 004665 586 VVELQHEGV---------------------------------G-LFGGPR---------ASKLL--Q-I-----P--ETR 612 (738)
Q Consensus 586 ~~~~~~~~~---------------------------------~-~~g~~~---------~~~~~--p-v-----~--~~~ 612 (738)
+++++++.+ + +.|+.. ..++| | | + .++
T Consensus 317 ~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~ 396 (675)
T PRK11563 317 RARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA 396 (675)
T ss_pred HHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence 999987632 1 134421 12333 6 3 3 257
Q ss_pred ccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcc--eeEEEECCCC--------CC-CCCC
Q 004665 613 LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNAST--------RF-CDGA 681 (738)
Q Consensus 613 i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~--~G~V~iN~~~--------~~-~~~~ 681 (738)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|.||||+.+ .. .+.+
T Consensus 397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~ 476 (675)
T PRK11563 397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQL 476 (675)
T ss_pred HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCC
Confidence 89999999999999999999999999999999999999999999999999997 9999999742 11 2567
Q ss_pred cccCccccccccccccc-cchhHHhhcceeeEEEE
Q 004665 682 RFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILR 715 (738)
Q Consensus 682 pfGgg~~sG~~~~~~~~-~G~~g~~~ft~~K~v~~ 715 (738)
||||.|.||+|+ + +|.+|+++|++.|+|..
T Consensus 477 pfGG~k~SG~G~----~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 477 VHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CcCCCCCCCCCc----cccchhHHHHhheeeeeec
Confidence 999999999863 3 36899999999999854
No 115
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=2.4e-66 Score=586.00 Aligned_cols=381 Identities=18% Similarity=0.243 Sum_probs=312.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.|++. .. +++. +......
T Consensus 7 ~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~------~~-~~~~----~~~~~~~ 75 (488)
T TIGR02518 7 IQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGK------WE-DKVI----KNVFAAT 75 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh------HH-HHHH----HHHHHHH
Confidence 67999999999999999999999999999999999999999999998776665442 11 1111 1112233
Q ss_pred HHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChHH-HHHHHHHHHHhCCEEEEeCCcccHHHHHHHH
Q 004665 393 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILH 470 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~ 470 (738)
.+.+++...+..|.... +.+...+.+++|+|||++|+|| ||.. ..+++++||++||+||+|||+.||.|+..++
T Consensus 76 ~~~~~~~~~~~~G~~~~----~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~ 151 (488)
T TIGR02518 76 IVYDSIKDMKTIGILSE----DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETV 151 (488)
T ss_pred HHHHHHhhCcccceecC----CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHH
Confidence 33333322223342111 2344567889999999999998 6974 5789999999999999999999999999999
Q ss_pred HHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHH
Q 004665 471 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 548 (738)
Q Consensus 471 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~ 548 (738)
+++++++.++ +|+|++|+|++ +.+.+..|..||+||+|+||||+++++.+ ..+.+|+++|+|||+|+||++|||+|+
T Consensus 152 ~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a-~~~~~pv~~e~gGn~p~iV~~dADld~ 230 (488)
T TIGR02518 152 KLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA-YSSGTPAIGVGPGNGPAYIERTANVKK 230 (488)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH-HHcCCCEEEEcCCCCeEEEeCCCCHHH
Confidence 9999888889 99999999996 55667777788999999999999999888 456899999999999999999999999
Q ss_pred HHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHH-------HHhcCceeecCC----------ccc-------
Q 004665 549 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE-------LQHEGVGLFGGP----------RAS------- 603 (738)
Q Consensus 549 Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~-------~~~~~~~~~g~~----------~~~------- 603 (738)
|++.+++|+|+|+| .|+|.+|+|||++|| |+|+++|+++ .+++.+ |++ ...
T Consensus 231 Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~-d~f~~~L~~~g~~~~~~~~~~~v---g~~~~~~~~~~gp~i~~~~~~~i 306 (488)
T TIGR02518 231 AVRDIIDSKTFDNGTICASEQSIIVEECNK-DAVVEELKKQGGYFLTAEEAEKL---GKFILRPNGTMNPQIVGKSPQVI 306 (488)
T ss_pred HHHHHHHHHhcCCCCCCCCCCEEEEeHHHH-HHHHHHHHHhhhhhcCHHHHHhh---cccccCCCCCcCcccccchHHHH
Confidence 99999999999877 999999999999999 7999999987 555432 211 000
Q ss_pred -ccc----c------------C-CCCCccccCcccceEEEEEeCCHHHHHHHHHc----CCCCcEEEEEecCHHHHHHHH
Q 004665 604 -KLL----Q------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFL 661 (738)
Q Consensus 604 -~~~----p------------v-~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~----~~~GLsa~VfT~d~~~a~~~~ 661 (738)
.++ + + ++++ ++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|+
T Consensus 307 ~~~i~~av~~gakll~gg~~~v~~~~~-~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~ 385 (488)
T TIGR02518 307 ANLAGLTVPEDAKVLIGEQNGVGNKNP-YSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFA 385 (488)
T ss_pred HHHhccccCCCCEEEEeCCCCCCCCCc-cccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHH
Confidence 000 1 1 2344 589999999999999999999999998 699999999999999999999
Q ss_pred HhcceeEEEECC---------CCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEEcCcc
Q 004665 662 CQVDSAAVFHNA---------STRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 719 (738)
Q Consensus 662 ~~l~~G~V~iN~---------~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~~~ 719 (738)
+++++|+|+||. ++.+.+++.||+|.+.|+|++ .+.|+++|++.|+|.++...
T Consensus 386 ~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~~~ 447 (488)
T TIGR02518 386 LKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGVRE 447 (488)
T ss_pred HhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecccc
Confidence 999999999994 344567777899999888764 38899999999999988733
No 116
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=2.2e-66 Score=584.82 Aligned_cols=380 Identities=16% Similarity=0.167 Sum_probs=312.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHH
Q 004665 316 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 395 (738)
Q Consensus 316 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~ 395 (738)
|++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~----~~--------~~ev~~~~~~l~ 68 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEA----RL--------QGELGRTTGQLR 68 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH----HH--------HHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999998877655432 11 234555556666
Q ss_pred HHhhccc---ccccccccc-c---cCCCceEEEEeeeeeeEEEEeCC-ChHH---HHHHHHHHHHhCCEEEEeCCcccHH
Q 004665 396 ILADMEE---PIGQILKRT-E---LADGLILEKTSCPLGVLLIVFES-RPDA---LVQIASLAIRSGNGLLLKGGKEAMR 464 (738)
Q Consensus 396 ~~~~~~~---~~~~~~~~~-~---~~~~~~~~~~~~PlGVV~~I~p~-~P~~---~~~~~~~ALaaGNtVVlKpse~tp~ 464 (738)
+++...+ ..+...... . ...+...+++++|+|||++|+|| ||.. .++++++||++||+||+|||+.+|.
T Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~ 148 (454)
T cd07129 69 LFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPG 148 (454)
T ss_pred HHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCch
Confidence 5554322 112111100 0 00122346789999999999998 6953 3489999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC-----CCcEEEecCCcCe
Q 004665 465 SNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-----KIPVLGHADGICH 537 (738)
Q Consensus 465 t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-----~~p~~lElGGk~p 537 (738)
++.++++++.+++.++ +|+|++|+|+| +.+.+..|..||+||+|+||||+.+|+.|++++ .+|+++|||||||
T Consensus 149 t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~ 228 (454)
T cd07129 149 TSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228 (454)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCc
Confidence 9999999999888888 99999999996 446777888899999999999999999998865 3799999999999
Q ss_pred EEEcCCC---CHHHHHHHHHHHccccCc-eecccceeEEecc-ccchHHHHHHHHHHHhcCc------------------
Q 004665 538 VYVDKSA---NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV------------------ 594 (738)
Q Consensus 538 ~iV~~dA---Dld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~-i~dd~f~~~l~~~~~~~~~------------------ 594 (738)
+||++|| |+|.|++.+++|+|.|+| +|+|++|+|||++ +| |+|+++|+++++++.+
T Consensus 229 ~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAG-DAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccH-HHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHH
Confidence 9999999 899999999999999988 9999999999999 99 7999999998887632
Q ss_pred -------eee-cCCcc-cc-cc-c-C----C----CCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecC-
Q 004665 595 -------GLF-GGPRA-SK-LL-Q-I----P----ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAED- 653 (738)
Q Consensus 595 -------~~~-g~~~~-~~-~~-p-v----~----~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d- 653 (738)
+++ |+... .+ ++ | | + ++++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 308 a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~ 387 (454)
T cd07129 308 LAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEED 387 (454)
T ss_pred HHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCc
Confidence 222 33221 12 33 5 2 2 47899999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHhc--ceeEEEECCCCCCC---CCCcccC-ccccccccccccccchhHHhhccee
Q 004665 654 -QKVAETFLCQV--DSAAVFHNASTRFC---DGARFGL-GAEVGISTSRIHARGPVGVEGLLTT 710 (738)
Q Consensus 654 -~~~a~~~~~~l--~~G~V~iN~~~~~~---~~~pfGg-g~~sG~~~~~~~~~G~~g~~~ft~~ 710 (738)
.+++++++++| ++|+|+||..+... +..|||| .|.||+|+ ...+|++++++||++
T Consensus 388 ~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~--~~~~g~~~~~~~~~~ 449 (454)
T cd07129 388 DLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPR--FTSVGTAAIERFLRP 449 (454)
T ss_pred hHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCc--cccccHHHHHHhccc
Confidence 89999999999 69999999765433 3789999 88898763 212489999999987
No 117
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=1.1e-65 Score=570.59 Aligned_cols=381 Identities=21% Similarity=0.242 Sum_probs=320.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcc
Q 004665 322 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 401 (738)
Q Consensus 322 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 401 (738)
+|++||+.|+++|.++|.++|+++++.|++|+++|++++.+|++|+... ..+....++.....++..+++.+++++...
T Consensus 2 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~-~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 2 SAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRS-LIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred hHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999999999999887532 222334455556678999999999887543
Q ss_pred ccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCC
Q 004665 402 EPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPD 479 (738)
Q Consensus 402 ~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~ 479 (738)
... +...+ .+...+++++|+|||++|+|| ||...++++++||++||+||+|||+.+|+++.++++++++++..
T Consensus 81 ~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~ 155 (397)
T cd07077 81 GHIQDVLLP-----DNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAA 155 (397)
T ss_pred CcccceEec-----CCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhc
Confidence 322 22111 123567899999999999998 58667899999999999999999999999999999999987543
Q ss_pred ccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC-CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHc
Q 004665 480 TVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAK 557 (738)
Q Consensus 480 alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~ 557 (738)
.+|+|++|+|++ +.+.+..|..||+||+|+||||+++++.+++.+. +|+++|+|||+|+||++|||+|.|++.+++++
T Consensus 156 g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~ 235 (397)
T cd07077 156 HGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSK 235 (397)
T ss_pred CCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHhh
Confidence 399999999985 5567777888999999999999999999988875 99999999999999999999999999999999
Q ss_pred cccCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcccccc-cCCCCCccccCcccceEEEEEeCCHH----
Q 004665 558 IDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-QIPETRLFHHEYNSMVCTVEIVDDVR---- 632 (738)
Q Consensus 558 f~n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~-pv~~~~i~~eE~FGPVl~v~~~~~~d---- 632 (738)
|.|+|.|+|++|+|||+++| |+|+++|++++++.|.++..+.+. .++ |.+++++++||+||||++|++|+|+|
T Consensus 236 ~~~GQ~C~a~~~v~V~~~i~-d~~~~~l~~~~~~~G~~~~~g~~~-~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~eai~ 313 (397)
T cd07077 236 FFDQNACASEQNLYVVDDVL-DPLYEEFKLKLVVEGLKVPQETKP-LSKETTPSFDDEALESMTPLECQFRVLDVISAVE 313 (397)
T ss_pred ccCCccCCCCeEEEEehhhh-HHHHHHHHHHHHhcCcCcCCCcee-eEEeccCCCChhhhhhhCceeEEEEEcchHHHHH
Confidence 99933999999999999999 799999999998866655422211 112 23578899999999999999999996
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC--CCCcccCcc--ccccccccccccc-hhHHhhc
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGA--EVGISTSRIHARG-PVGVEGL 707 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~--~~~pfGgg~--~sG~~~~~~~~~G-~~g~~~f 707 (738)
||++++|+++|||++||||+|.+++.++++++++|+|+||++.... ..+||||.+ .||.| +++| ++|+++|
T Consensus 314 ~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g----~~~g~~~~~~~~ 389 (397)
T cd07077 314 NAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMN----NIFGAGVGHDAL 389 (397)
T ss_pred HHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEcccc----CCCCCCCChHHh
Confidence 6667889999999999999999999999999999999999987655 334555555 66664 4678 9999999
Q ss_pred ceeeEEE
Q 004665 708 LTTRWIL 714 (738)
Q Consensus 708 t~~K~v~ 714 (738)
++.|+|+
T Consensus 390 ~~~k~v~ 396 (397)
T cd07077 390 RPLKRLV 396 (397)
T ss_pred cceeEee
Confidence 9999975
No 118
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=8.2e-66 Score=572.92 Aligned_cols=376 Identities=20% Similarity=0.263 Sum_probs=300.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH-HH
Q 004665 316 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK-SI 394 (738)
Q Consensus 316 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~~ 394 (738)
|++|+++|++||+.|+++|.++|.++|++++++|++|++||++++++|+||+.. ++. ..++...++ .+
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~----ea~-------~~e~~~~~~~~~ 69 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVV----EDK-------VIKNHFASEYVY 69 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcH----HHH-------HHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999998877765421 211 124555555 56
Q ss_pred HHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHH
Q 004665 395 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 472 (738)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l 472 (738)
++++.. +..+.... ..+...+++|+|+|||++|+|| ||+ +..++++|||++||+||+|||+.||+|+.+++++
T Consensus 70 ~~~~~~-~~~g~~~~----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 144 (436)
T cd07122 70 NDIKDM-KTVGVIEE----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKI 144 (436)
T ss_pred HHHhcC-cceeeecc----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHH
Confidence 666542 22222111 1234567889999999999998 696 4679999999999999999999999999999999
Q ss_pred HHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHHH
Q 004665 473 ITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 550 (738)
Q Consensus 473 ~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~Aa 550 (738)
++++|.++ +|+|++|+|++ +.+++..|..||+||+|+||||+++++..+ ...+|+++|||||||+||++|||+|+|+
T Consensus 145 ~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~ 223 (436)
T cd07122 145 MREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAY-SSGKPAIGVGPGNVPAYIDETADIKRAV 223 (436)
T ss_pred HHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHH-hcCCCEEEecCCCCeEEEcCCCCHHHHH
Confidence 99888889 99999999996 556777888899999999999999988764 3479999999999999999999999999
Q ss_pred HHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhc-------Cc---------ee----ecCCcc------c
Q 004665 551 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------GV---------GL----FGGPRA------S 603 (738)
Q Consensus 551 ~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~-------~~---------~~----~g~~~~------~ 603 (738)
+.+++|+|.|+| .|++++|+|||++|| |+|+++|+++...+ .+ .+ .+.... .
T Consensus 224 ~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~ 302 (436)
T cd07122 224 KDIILSKTFDNGTICASEQSVIVDDEIY-DEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAG 302 (436)
T ss_pred HHHHHHhhccCCCCCCCCCEEEEechhH-HHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcC
Confidence 999999999988 999999999999999 79999999876543 10 00 010000 0
Q ss_pred ccc-c-----------C-CCCCccccCcccceEEEEEeCCHHHHHHHHHcC----CCCcEEEEEecCHHHHHHHHHhcce
Q 004665 604 KLL-Q-----------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAEDQKVAETFLCQVDS 666 (738)
Q Consensus 604 ~~~-p-----------v-~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~----~~GLsa~VfT~d~~~a~~~~~~l~~ 666 (738)
..+ | + ++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++++++++++
T Consensus 303 ~~~~~ga~vl~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~a 381 (436)
T cd07122 303 IEVPEDTKVLVAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPV 381 (436)
T ss_pred CCCCCCCeEEEEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCc
Confidence 011 1 1 357777 56799999999999999999999998 8999999999999999999999999
Q ss_pred eEEEECCCCCCC------CCCcc----cCccccccccccccccchhHHhhcceeeEEEE
Q 004665 667 AAVFHNASTRFC------DGARF----GLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 667 G~V~iN~~~~~~------~~~pf----Ggg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
|+||||.++.+. .++|+ |++...|.+ ..+..+..+|+++|+|.+
T Consensus 382 G~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 382 SRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNS-----TSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred eEEEEeCCccccccCccCCCCCceeeeeccccCCCc-----CCCCCChHHhheeEeecc
Confidence 999999887531 11222 223222221 124467889999999865
No 119
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=2.6e-65 Score=619.81 Aligned_cols=385 Identities=18% Similarity=0.201 Sum_probs=330.9
Q ss_pred hHHHhhc-CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 004665 289 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 367 (738)
Q Consensus 289 ~i~~~~t-g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~ 367 (738)
.+.++.+ ++.+|++..++ .++|++|+++|++||+.|+++|.++|+++|++++++|++|+++|+.++.+|.||+
T Consensus 662 ~v~nPa~~~~~vg~v~~a~------~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt 735 (1318)
T PRK11809 662 PVINPADPRDIVGYVREAT------PAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKT 735 (1318)
T ss_pred EeECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCC
Confidence 3455666 67789999888 8999999999999999999999999999999999999999999999988776654
Q ss_pred HhhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHH
Q 004665 368 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 445 (738)
Q Consensus 368 ~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 445 (738)
.. ++ ..|+.++++.+++|+...+.. . ....++|+|||++|+|| ||+ +..++++
T Consensus 736 ~~----~A--------~~EV~eaidflryyA~~a~~~---~----------~~~~~~PlGVV~~IsPWNFPlai~~g~ia 790 (1318)
T PRK11809 736 FS----NA--------IAEVREAVDFLRYYAGQVRDD---F----------DNDTHRPLGPVVCISPWNFPLAIFTGQVA 790 (1318)
T ss_pred HH----HH--------HHHHHHHHHHHHHHHHHHHHh---c----------CCceeecccEEEEECCCccHHHHHHHHHH
Confidence 21 21 357899999999998643210 0 02458999999999998 686 5678999
Q ss_pred HHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 446 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 446 ~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
+||+|||+||+||||+||+++..+++++++ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.
T Consensus 791 aALaAGN~VV~KPseqTpl~a~~lv~ll~e----AGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~ 866 (1318)
T PRK11809 791 AALAAGNSVLAKPAEQTPLIAAQAVRILLE----AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRN 866 (1318)
T ss_pred HHHHcCCeEEEeCCCCcHHHHHHHHHHHHH----hCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 56789999999999999999999999999876
Q ss_pred CC---------CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcC
Q 004665 524 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG 593 (738)
Q Consensus 524 a~---------~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~ 593 (738)
++ +|+++|+|||||+||++|||+|+|++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|+++++++.
T Consensus 867 aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Ia-d~fl~~L~~a~~~l~ 945 (1318)
T PRK11809 867 LAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVA-DRTLKMLRGAMAECR 945 (1318)
T ss_pred HhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHH-HHHHHHHHHHHHhcC
Confidence 41 6999999999999999999999999999999999988 999999999999999 799999999998864
Q ss_pred ce----------------------------------ee-cCCc-----ccc-cc-c-C---CCCCccccCcccceEEEEE
Q 004665 594 VG----------------------------------LF-GGPR-----ASK-LL-Q-I---PETRLFHHEYNSMVCTVEI 627 (738)
Q Consensus 594 ~~----------------------------------~~-g~~~-----~~~-~~-p-v---~~~~i~~eE~FGPVl~v~~ 627 (738)
+. +. |+.. ..+ |+ | | +++.+++||+||||++|++
T Consensus 946 vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~~ 1025 (1318)
T PRK11809 946 MGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVVR 1025 (1318)
T ss_pred CCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEEE
Confidence 20 11 1100 113 33 5 3 4577899999999999999
Q ss_pred eC--CHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC--CCCcccCccccccccccccccchhH
Q 004665 628 VD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVG 703 (738)
Q Consensus 628 ~~--~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~--~~~pfGgg~~sG~~~~~~~~~G~~g 703 (738)
|+ |+||||+++|+++|||+++|||+|.+++.++++++++|+||||...... ...||||.+.||.|. +.+|+++
T Consensus 1026 ~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~---kaGGp~y 1102 (1318)
T PRK11809 1026 YNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP---KAGGPLY 1102 (1318)
T ss_pred eCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC---CCCCHHH
Confidence 96 7999999999999999999999999999999999999999999866432 346999998888762 3579999
Q ss_pred HhhcceeeE
Q 004665 704 VEGLLTTRW 712 (738)
Q Consensus 704 ~~~ft~~K~ 712 (738)
+..|++.+.
T Consensus 1103 L~~f~~~~~ 1111 (1318)
T PRK11809 1103 LYRLLATRP 1111 (1318)
T ss_pred HHHHhccCC
Confidence 999999874
No 120
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=6.8e-65 Score=570.54 Aligned_cols=375 Identities=14% Similarity=0.103 Sum_probs=308.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHH
Q 004665 317 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 396 (738)
Q Consensus 317 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~ 396 (738)
++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++.+ . ..|+...++.+++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-----~--------~~ev~~~i~~~~~ 68 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWM-----F--------AENICGDQVQLRA 68 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCchh-----h--------hhhhcchHHHHHH
Confidence 67999999999999999999999999999999999999999999877765531 1 1245555555555
Q ss_pred Hhhccccc---cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHH
Q 004665 397 LADMEEPI---GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 471 (738)
Q Consensus 397 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~ 471 (738)
++...+.. +..........+...+.+++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|.++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~ 148 (442)
T cd07084 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVR 148 (442)
T ss_pred HHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHH
Confidence 54332211 1100000000123457889999999999998 696 567899999999999999999999999999999
Q ss_pred HHHhhCCCc-c-CcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC-CcEEEecCCcCeEEEcCCC-CHH
Q 004665 472 VITSAIPDT-V-GEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSA-NLD 547 (738)
Q Consensus 472 l~~~al~~a-l-P~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-~p~~lElGGk~p~iV~~dA-Dld 547 (738)
++++ + + |+|++|+|++....+..|..||++|+|+||||+++|++|++.+. +|+++|||||||+||++|| |+|
T Consensus 149 ~l~~----ag~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~ 224 (442)
T cd07084 149 LLHY----AGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVD 224 (442)
T ss_pred HHHH----hCCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHH
Confidence 9997 5 6 99999999964447787888999999999999999999999886 8999999999999999999 699
Q ss_pred HHHHHHHHHccccCc-eecccceeEEecc-ccchHHHHHHHHHHHhcCc--------------------------ee-ec
Q 004665 548 VAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV--------------------------GL-FG 598 (738)
Q Consensus 548 ~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~-i~dd~f~~~l~~~~~~~~~--------------------------~~-~g 598 (738)
.|++.+++++|.|+| .|+|++|+|||++ +| |+|+++|+++++++.+ ++ .|
T Consensus 225 ~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~-~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~g 303 (442)
T cd07084 225 YVAWQCVQDMTACSGQKCTAQSMLFVPENWSK-TPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFS 303 (442)
T ss_pred HHHHHHHHHHhcccCCeecCCcEEEEeCCccH-HHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeC
Confidence 999999999999988 9999999999999 99 7999999998887531 12 23
Q ss_pred CCcc--------cc-cc-c-C-----CCC---CccccCcccceEEEEEeCC--HHHHHHHHHcCCCCcEEEEEecCHHHH
Q 004665 599 GPRA--------SK-LL-Q-I-----PET---RLFHHEYNSMVCTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVA 657 (738)
Q Consensus 599 ~~~~--------~~-~~-p-v-----~~~---~i~~eE~FGPVl~v~~~~~--~dEAi~~aN~~~~GLsa~VfT~d~~~a 657 (738)
+... .+ ++ | | ++| ++++||+||||++|++|+| +||||+++|+++|||++||||+|.+++
T Consensus 304 g~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 383 (442)
T cd07084 304 GKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFL 383 (442)
T ss_pred CcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHH
Confidence 3221 12 33 5 2 344 8999999999999999999 999999999999999999999999999
Q ss_pred HHHHHhc-ceeEEEECCC--CCCCCCCcccC-ccccccccccccc-cchhHHhhcceeeEE
Q 004665 658 ETFLCQV-DSAAVFHNAS--TRFCDGARFGL-GAEVGISTSRIHA-RGPVGVEGLLTTRWI 713 (738)
Q Consensus 658 ~~~~~~l-~~G~V~iN~~--~~~~~~~pfGg-g~~sG~~~~~~~~-~G~~g~~~ft~~K~v 713 (738)
+++++++ ++|+||||.. +...+..|||| ++.||+|+ + +|.+++++||+...+
T Consensus 384 ~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~----~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 384 QELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA----GIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCc----cccchHHhhheeeeeee
Confidence 9999999 9999999976 33445567876 56888763 3 389999999987654
No 121
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=1.4e-64 Score=615.36 Aligned_cols=388 Identities=18% Similarity=0.195 Sum_probs=334.2
Q ss_pred HHHhhc-CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 004665 290 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 368 (738)
Q Consensus 290 i~~~~t-g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~ 368 (738)
+.++.+ ++.+|++..++ ++++++|+++|++||+.|+.+|.++|+++|++++++|++++++|++++.+|.||+.
T Consensus 571 v~nP~~~~~~vg~v~~a~------~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~ 644 (1208)
T PRK11905 571 VLNPADHDDVVGTVTEAS------AEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTL 644 (1208)
T ss_pred EECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 455677 77889999888 89999999999999999999999999999999999999999999999887765542
Q ss_pred hhchhhhHHHHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHH
Q 004665 369 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 446 (738)
Q Consensus 369 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 446 (738)
. ++ ..++.++++.+++|+...+... + ...++|+|||++|+|| ||+ +..+++++
T Consensus 645 ~----ea--------~~Ev~eaid~lr~ya~~a~~~~----------~---~~~~~P~GVv~~IsPwNfPlai~~g~i~a 699 (1208)
T PRK11905 645 A----NA--------IAEVREAVDFLRYYAAQARRLL----------N---GPGHKPLGPVVCISPWNFPLAIFTGQIAA 699 (1208)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhc----------C---CceecCccEEEEEcCCcCHHHHHHHHHHH
Confidence 1 21 3578889999999886432110 0 1357899999999998 686 56789999
Q ss_pred HHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC
Q 004665 447 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 524 (738)
Q Consensus 447 ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a 524 (738)
||++||+||+|||++||+++..+++++++ + +|+|++|+|+| +.++++.|..||+|++|+||||+++|+.|++.+
T Consensus 700 ALaaGN~VV~KPse~tpl~a~~l~~ll~e----AGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~ 775 (1208)
T PRK11905 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHE----AGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTL 775 (1208)
T ss_pred HHHcCCEEEEeCCcccHHHHHHHHHHHHH----cCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 556888899999999999999999999998864
Q ss_pred ------CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCce--
Q 004665 525 ------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-- 595 (738)
Q Consensus 525 ------~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~-- 595 (738)
.+|+++|+|||||+||++|||+|.|++.+++|+|.|+| .|+|.+|+|||+++| |+|+++|+++++++.+.
T Consensus 776 A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~-d~f~e~L~~~~~~l~vGdP 854 (1208)
T PRK11905 776 AKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVA-DRVLTMLKGAMDELRIGDP 854 (1208)
T ss_pred HhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHH-HHHHHHHHHHHHHhcCCCc
Confidence 27999999999999999999999999999999999988 999999999999999 79999999999876430
Q ss_pred --------------------------------eecCCc----ccccc--c-C---CCCCccccCcccceEEEEEeC--CH
Q 004665 596 --------------------------------LFGGPR----ASKLL--Q-I---PETRLFHHEYNSMVCTVEIVD--DV 631 (738)
Q Consensus 596 --------------------------------~~g~~~----~~~~~--p-v---~~~~i~~eE~FGPVl~v~~~~--~~ 631 (738)
+.++.. ..++| | | +++.+++||+||||++|++|+ ++
T Consensus 855 ~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~dl 934 (1208)
T PRK11905 855 WRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADEL 934 (1208)
T ss_pred hhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCCCH
Confidence 111100 11233 5 3 457889999999999999997 79
Q ss_pred HHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCC--CCCcccCccccccccccccccchhHHhhcce
Q 004665 632 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLT 709 (738)
Q Consensus 632 dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~--~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~ 709 (738)
||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... ...||||.|.||.|. +.+|++++..|++
T Consensus 935 deaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~---kaGGp~~L~~f~~ 1011 (1208)
T PRK11905 935 DRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP---KAGGPLYLGRLVR 1011 (1208)
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC---cCCCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999876543 346999999888752 3579999999999
Q ss_pred eeEEEEc
Q 004665 710 TRWILRG 716 (738)
Q Consensus 710 ~K~v~~~ 716 (738)
.|++++.
T Consensus 1012 ~k~v~~~ 1018 (1208)
T PRK11905 1012 EAPTPIP 1018 (1208)
T ss_pred cceeecc
Confidence 9999865
No 122
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=4.5e-64 Score=569.66 Aligned_cols=364 Identities=16% Similarity=0.142 Sum_probs=294.1
Q ss_pred HhhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh--
Q 004665 292 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE-- 369 (738)
Q Consensus 292 ~~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~-- 369 (738)
++++++.++++...+ .++++++|++||+.|+++++.+|.++|++++++|++|.+||++++++|.|++..
T Consensus 71 ~P~t~~~~~~~~~~~---------~~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a 141 (551)
T TIGR02288 71 SPYGVELGVTYPQCD---------GDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMA 141 (551)
T ss_pred CCCCCCEEEEEcCCC---------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH
Confidence 367788888877666 389999999999999999999999999999999999999999999988877642
Q ss_pred --hchhhhHHHHhhccHHHHHHHHHHHHHHhhccc-cccccc---ccc-ccCCCceEEEEeeeeeeEEEEeCC-ChH-HH
Q 004665 370 --AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQIL---KRT-ELADGLILEKTSCPLGVLLIVFES-RPD-AL 440 (738)
Q Consensus 370 --~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~---~~~-~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~ 440 (738)
+|++ .+....++.++++++... ..+... +.. ........+..++|+|||++|+|| ||. +.
T Consensus 142 ~e~gkp-----------~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~ 210 (551)
T TIGR02288 142 FQAGGP-----------HAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNT 210 (551)
T ss_pred HhccCh-----------HHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHH
Confidence 2221 123333445555443221 111111 100 000011123478999999999997 686 46
Q ss_pred HHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC--CChhhHhhhcCCCcCEEEeecCHHHH
Q 004665 441 VQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLV 517 (738)
Q Consensus 441 ~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~vd~V~fTGS~~~g 517 (738)
.++++|||++||+||+|||+.||+++.++.+++.+++.++ ||+|+||+|++ +.++++.|..||+|++|+||||+++|
T Consensus 211 ~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G 290 (551)
T TIGR02288 211 YPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFG 290 (551)
T ss_pred HHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHH
Confidence 8999999999999999999999998876655555555568 99999999995 45688888899999999999999999
Q ss_pred HHHHHhCC-CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEecc---------ccchHHHHHHH
Q 004665 518 SQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELV 586 (738)
Q Consensus 518 ~~i~~~a~-~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~---------i~dd~f~~~l~ 586 (738)
+.|++.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|+
T Consensus 291 ~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~-def~~~L~ 369 (551)
T TIGR02288 291 QWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSY-DEVAADLA 369 (551)
T ss_pred HHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHH-HHHHHHHH
Confidence 99998875 8999999999999999999999999999999999988 9999999999999 79 79999999
Q ss_pred HHHHhcCc------------------------------eeecCCcc-----cc--cc-c-C----C-CCCccccCcccce
Q 004665 587 VELQHEGV------------------------------GLFGGPRA-----SK--LL-Q-I----P-ETRLFHHEYNSMV 622 (738)
Q Consensus 587 ~~~~~~~~------------------------------~~~g~~~~-----~~--~~-p-v----~-~~~i~~eE~FGPV 622 (738)
++++++ + .+.|+... .+ ++ | | + +|++++||+||||
T Consensus 370 ~~~~~l-vGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPV 448 (551)
T TIGR02288 370 TAIDGL-LGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPI 448 (551)
T ss_pred HHHHHh-cCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCE
Confidence 998875 2 11233211 12 23 4 2 3 6799999999999
Q ss_pred EEEEEeCCHHHHHHHHHcC--CCC-cEEEEEecCHHHHHHHHHhc----------ceeEEEECCCCCC
Q 004665 623 CTVEIVDDVRAAIDHIHQH--GSA-HTDCIVAEDQKVAETFLCQV----------DSAAVFHNASTRF 677 (738)
Q Consensus 623 l~v~~~~~~dEAi~~aN~~--~~G-Lsa~VfT~d~~~a~~~~~~l----------~~G~V~iN~~~~~ 677 (738)
++|++|+|+||||+++|++ +|| |++||||+|.++++++.+++ ++|.|+||.+..+
T Consensus 449 l~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~ 516 (551)
T TIGR02288 449 AFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAF 516 (551)
T ss_pred EEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCC
Confidence 9999999999999999999 667 99999999999999999999 9999999986543
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-63 Score=599.56 Aligned_cols=385 Identities=17% Similarity=0.229 Sum_probs=313.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
.+||++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.|++.. ++.. .+...+++
T Consensus 11 ~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~----e~~~-------~~~~~~~~ 79 (862)
T PRK13805 11 VAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVV----EDKV-------IKNHFASE 79 (862)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChH----HHHH-------HHHHHHHH
Confidence 789999999999999999999999999999999999999999999999887766521 2211 13344445
Q ss_pred HHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHH
Q 004665 393 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 470 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~ 470 (738)
.++++....+..|.. .. ..+...+++++|+|||++|+|| ||+ +.++++++||++||+||+|||+.||.|+.+++
T Consensus 80 ~~~~~~~~~~~~g~~-~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~ 155 (862)
T PRK13805 80 YIYNSYKDEKTVGVI-EE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAA 155 (862)
T ss_pred HHHHHhcCCCccccc-Cc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHH
Confidence 554443322222321 11 1234567889999999999998 696 55789999999999999999999999999999
Q ss_pred HHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHH
Q 004665 471 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 548 (738)
Q Consensus 471 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~ 548 (738)
+++++++.++ +|+|+||+|++ +.+.++.|..||+||+|+||||+++++.+ +...+|+++|+|||||+||++|||+|.
T Consensus 156 ~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a-~~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 156 KIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAA-YSSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHH-HhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 9999988889 99999999996 55677777789999999999999998776 345799999999999999999999999
Q ss_pred HHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhc-------------------Cc--eeecCCcc----
Q 004665 549 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------------------GV--GLFGGPRA---- 602 (738)
Q Consensus 549 Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~-------------------~~--~~~g~~~~---- 602 (738)
|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++...+ +. .+.|+...
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~ 313 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIY-DEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAE 313 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhH-HHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHH
Confidence 99999999999987 999999999999999 79999997642110 00 12232110
Q ss_pred -cc-cc-c--------C----CCCCccccCcccceEEEEEeCCHHHHHHHHHc----CCCCcEEEEEecCHHHHHHHHHh
Q 004665 603 -SK-LL-Q--------I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQ 663 (738)
Q Consensus 603 -~~-~~-p--------v----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~----~~~GLsa~VfT~d~~~a~~~~~~ 663 (738)
.+ ++ | + +++++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|+++
T Consensus 314 ~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~ 392 (862)
T PRK13805 314 MAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLR 392 (862)
T ss_pred HcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhh
Confidence 01 11 1 2 3567776 799999999999999999999998 58999999999999999999999
Q ss_pred cceeEEEECCCC----------CCCCCCcccCccccccccccccccchhHHhhcceeeEEEEcCccc
Q 004665 664 VDSAAVFHNAST----------RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 720 (738)
Q Consensus 664 l~~G~V~iN~~~----------~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~~~~ 720 (738)
+++|+|+||.++ .+.+++|||+ +.+|.+ .++|+.|+++|++.|+|..+....
T Consensus 393 l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~----~~~g~~g~~~~~~~k~v~~~~~~~ 454 (862)
T PRK13805 393 MKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGN----SVSENVGAKHLLNIKTVAKRRENM 454 (862)
T ss_pred CCccEEEEeCCccccccccccCCcCccccccc-cCCCCC----cCCCCCCHHHhheeeeeeeccccc
Confidence 999999999886 4577889997 444543 246999999999999998765443
No 124
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=5.4e-62 Score=499.22 Aligned_cols=403 Identities=17% Similarity=0.190 Sum_probs=339.0
Q ss_pred hhcCceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhch
Q 004665 293 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 372 (738)
Q Consensus 293 ~~tg~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~ 372 (738)
+.+|.-.|.+...+ +.|+++-+-.|++||++|.+.+..+|++.|+.+.+.+.+|.|.+++...+|.||. +
T Consensus 71 Patg~yLG~fp~~~------~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKT----m 140 (583)
T KOG2454|consen 71 PATGKYLGYFPALS------PTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKT----M 140 (583)
T ss_pred CCCcceeeecccCC------hhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCch----h
Confidence 55788889988888 8899999999999999999999999999999999999999999999888887654 2
Q ss_pred hhhHHHHhhccHHHHHHHHHHHHHHhhccc-cccccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHH
Q 004665 373 AKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 449 (738)
Q Consensus 373 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 449 (738)
.++.+.++..+.+.+.+.+..-++|.+..+ +-+.. ..-...++.++|+||+++|.|| ||+ -.+.++..||.
T Consensus 141 vDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~------~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlF 214 (583)
T KOG2454|consen 141 VDASLGEILVTLEKITWTLSEGERWLKPESRPNGRA------MLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALF 214 (583)
T ss_pred hhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhh------eeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHh
Confidence 233344555555666665555444432111 11110 0011246889999999999998 686 45688999999
Q ss_pred hCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---C
Q 004665 450 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---K 525 (738)
Q Consensus 450 aGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~ 525 (738)
+||.+|+|-||++.+++....|+++.+|... -||+++|+++.-+++++.|.+|+.|++|.|.||..+++.|++.| .
T Consensus 215 sGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~L 294 (583)
T KOG2454|consen 215 SGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTL 294 (583)
T ss_pred cCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhc
Confidence 9999999999999999999999999988766 99999999998778889999999999999999999999999877 3
Q ss_pred CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc----------
Q 004665 526 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------- 594 (738)
Q Consensus 526 ~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~---------- 594 (738)
+|+++|||||+|+||++|||++..+..+++|-|+.+| .|++.+|++||+++| |.|+..|-.+++....
T Consensus 295 TPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Y-d~~i~~l~~rv~s~r~G~~~~~~vDM 373 (583)
T KOG2454|consen 295 TPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIY-DAFIGQLTKRVKSVRAGPPLTGRVDM 373 (583)
T ss_pred CcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchH-HHHHHHHHHHHHHHHcCCCccCccch
Confidence 8999999999999999999999999999999999988 999999999999999 7999999888775421
Q ss_pred ------------------------ee-ecCCcc-------cccc-c---C---CCCCccccCcccceEEEEEeCCHHHHH
Q 004665 595 ------------------------GL-FGGPRA-------SKLL-Q---I---PETRLFHHEYNSMVCTVEIVDDVRAAI 635 (738)
Q Consensus 595 ------------------------~~-~g~~~~-------~~~~-p---v---~~~~i~~eE~FGPVl~v~~~~~~dEAi 635 (738)
++ .||.+. ..+| | | ++|.|+|||.|||+++++++++.|++|
T Consensus 374 GAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i 453 (583)
T KOG2454|consen 374 GAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVI 453 (583)
T ss_pred hhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHH
Confidence 11 122211 1233 3 2 469999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCC-CCCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 636 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 636 ~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
++||+++|||+++||+.|..++.+++.++++|+|.||+... .-..+||||.+.||+| +..|.+|++..++.|+|.
T Consensus 454 ~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyG----rFaG~EGLrg~Cn~Ksv~ 529 (583)
T KOG2454|consen 454 KLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYG----RFAGIEGLRGCCNVKSVA 529 (583)
T ss_pred hhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcc----ccccHHHHHHHhccccee
Confidence 99999999999999999999999999999999999999654 3456999999999986 356999999999999997
Q ss_pred Ec
Q 004665 715 RG 716 (738)
Q Consensus 715 ~~ 716 (738)
+.
T Consensus 530 yd 531 (583)
T KOG2454|consen 530 YD 531 (583)
T ss_pred cc
Confidence 76
No 125
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=3e-60 Score=539.71 Aligned_cols=391 Identities=16% Similarity=0.141 Sum_probs=303.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHH
Q 004665 314 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 393 (738)
Q Consensus 314 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~ 393 (738)
.++++++++|++||+.|+++++++|.++|++++++|++|+++|+++++.|+|++..+ +.. .....+++..++.
T Consensus 84 adv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~----a~q---a~~~~evd~a~e~ 156 (549)
T cd07127 84 CDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMM----AFQ---AGGPHAQDRGLEA 156 (549)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHH----HHh---cccHHHHHHHHHH
Confidence 389999999999999999999999999999999999999999999999888766421 110 0001245555555
Q ss_pred HHHHhhcccc-ccccc---cccc-cCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHH
Q 004665 394 IRILADMEEP-IGQIL---KRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSN 466 (738)
Q Consensus 394 ~~~~~~~~~~-~~~~~---~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~ 466 (738)
++++++.... .+... +... .+.....+..++|+|||++|+|| ||. ..+.++++||++||+||+|||+.+|+++
T Consensus 157 ~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~ 236 (549)
T cd07127 157 VAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPL 236 (549)
T ss_pred HHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhH
Confidence 5555432211 11100 0000 00011113478999999999997 685 4578999999999999999999999998
Q ss_pred HHHHHHHHhhCCCc-cCcCcEEEecC--CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC-CcEEEecCCcCeEEEcC
Q 004665 467 AILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDK 542 (738)
Q Consensus 467 ~~l~~l~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-~p~~lElGGk~p~iV~~ 542 (738)
.++.+++.++|.++ ||+|+||+|++ +.++++.|..||+|++|+||||+.+|+.|++.+. +|+++|||||||+||++
T Consensus 237 ~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~~~v~~ElGGkn~~IV~~ 316 (549)
T cd07127 237 AITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQAQVYTEKAGVNTVVVDS 316 (549)
T ss_pred HHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhccCcEEEecCCcCeEEECC
Confidence 87777777777778 99999999995 3567888889999999999999999999998874 89999999999999999
Q ss_pred CCCHHHHHHHHHHHccccCc-eecccceeEEecc---------ccchHHHHHHHHHHHhcC-----------c-------
Q 004665 543 SANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELVVELQHEG-----------V------- 594 (738)
Q Consensus 543 dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~---------i~dd~f~~~l~~~~~~~~-----------~------- 594 (738)
|||++.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|+++++++- .
T Consensus 317 dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~-d~f~~~L~~~~~~l~Gdp~~~~~~~Gpli~~~~~ 395 (549)
T cd07127 317 TDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSF-DEVAADLAAAIDGLLADPARAAALLGAIQSPDTL 395 (549)
T ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHH-HHHHHHHHHHHHHhcCCccccccccCCcCCHHHH
Confidence 99999999999999999988 9999999999999 89 799999999888751 0
Q ss_pred -----------eeecCCcc-----cc-cc--c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCC--C-CcE
Q 004665 595 -----------GLFGGPRA-----SK-LL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHG--S-AHT 646 (738)
Q Consensus 595 -----------~~~g~~~~-----~~-~~--p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~--~-GLs 646 (738)
.+.|+... .+ ++ | | ++|++++||+||||++|++|+|.||||+++|++. | ||+
T Consensus 396 ~ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt 475 (549)
T cd07127 396 ARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMT 475 (549)
T ss_pred HHHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCce
Confidence 11233211 12 22 6 2 3689999999999999999999999999999984 4 699
Q ss_pred EEEEecCHHHHHHHHHh-ccee-EEEECCCCCC--CCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 647 DCIVAEDQKVAETFLCQ-VDSA-AVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 647 a~VfT~d~~~a~~~~~~-l~~G-~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
+||||+|.++++++.++ .++| +++||..... ....|||+.+.||... ..+.......|...|-.++
T Consensus 476 ~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~---~a~~~~~~~~fv~~r~~~~ 545 (549)
T cd07127 476 VGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP---AANAALTDGAFVANRFRVV 545 (549)
T ss_pred EEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc---ccccccchhhhhhcceEEE
Confidence 99999999999999987 7777 9999943222 2224699888777642 1223455556666554444
No 126
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=5.6e-60 Score=531.92 Aligned_cols=375 Identities=21% Similarity=0.260 Sum_probs=315.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHH
Q 004665 317 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 396 (738)
Q Consensus 317 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~ 396 (738)
++++++|++||+.|+++|.++|.++|+++++.|.++.++|++++++|++++.+ +. ..++..+++.+++
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~----~~--------~~ei~~~i~~l~~ 68 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIE----EA--------LGEVARAADTFRY 68 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999999887765432 11 2345555555555
Q ss_pred Hhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHH
Q 004665 397 LADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 473 (738)
Q Consensus 397 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~ 473 (738)
++...+.. +.... ....+...+.+++|+|||++|+|| +|. ..++.+++||++||+||+|||+.+|.++..+.+++
T Consensus 69 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l 146 (432)
T cd07078 69 YAGLARRLHGEVIP--SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELL 146 (432)
T ss_pred HHHHHHHhcCcccc--ccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 44332221 11111 112344567889999999999997 695 57899999999999999999999999999999999
Q ss_pred HhhCCCc-cCcCcEEEecCC-ChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC---CcEEEecCCcCeEEEcCCCCHHH
Q 004665 474 TSAIPDT-VGEKLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 548 (738)
Q Consensus 474 ~~al~~a-lP~gvv~vv~~~-~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dADld~ 548 (738)
++ + +|+|+++++++. ++.+..|..|+++|+|+||||+.+|+.|++.+. +|+++|+|||+|+||++|||++.
T Consensus 147 ~~----ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~ 222 (432)
T cd07078 147 AE----AGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDA 222 (432)
T ss_pred HH----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHH
Confidence 87 6 899999999964 446777778899999999999999999988774 89999999999999999999999
Q ss_pred HHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc---------------------------------
Q 004665 549 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------------------- 594 (738)
Q Consensus 549 Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~--------------------------------- 594 (738)
|++.+++++|.|+| .|++++++|||++++ ++|+++|+++++++..
T Consensus 223 aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~-~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 301 (432)
T cd07078 223 AVKGAVFGAFGNAGQVCTAASRLLVHESIY-DEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEG 301 (432)
T ss_pred HHHHHHHHHHhccCCCccCCceEEEcHHHH-HHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 99999999999988 999999999999999 7999999999886532
Q ss_pred -ee-ecCCccc---c-cc-c-C-----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHH
Q 004665 595 -GL-FGGPRAS---K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 661 (738)
Q Consensus 595 -~~-~g~~~~~---~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~ 661 (738)
++ .|+.... + ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus 302 ~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~ 381 (432)
T cd07078 302 AKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVA 381 (432)
T ss_pred CEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 2333221 2 33 5 2 35789999999999999999999999999999999999999999999999999
Q ss_pred HhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 662 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 662 ~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
+++++|.|+||+.+.. .+..||||.+.||+| +++|++|+++||+.|+|.
T Consensus 382 ~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g----~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 382 ERLEAGTVWINDYSVGAEPSAPFGGVKQSGIG----REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred HhcCcceEEECCCCCCCCCCCCcCCcCcCcCC----ccchHHHHHHhhceEEEE
Confidence 9999999999998776 778999999999885 367999999999999975
No 127
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=2.3e-58 Score=507.96 Aligned_cols=355 Identities=22% Similarity=0.250 Sum_probs=302.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcc
Q 004665 322 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 401 (738)
Q Consensus 322 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 401 (738)
+|++||++|++++.++|.++|+++++.|.++.++|+++++.|++++.. + ...|+...++.+++++...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~----~--------~~~ev~~~~~~l~~~~~~~ 69 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE----E--------ALGEVARAIDTFRYAAGLA 69 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH----H--------HHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999887765432 1 1234555555555554332
Q ss_pred ccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChHH-HHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCC
Q 004665 402 EPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 478 (738)
Q Consensus 402 ~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~ 478 (738)
+.. +.... ....+...+.+++|+|||++|+|| +|.+ .++++++||++||+||+|||+.+|.++..|++++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~--- 144 (367)
T cd06534 70 DKLGGPELP--SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQE--- 144 (367)
T ss_pred HHhcCCccc--ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHh---
Confidence 211 11111 112345667889999999999997 5865 789999999999999999999999999999999986
Q ss_pred Cc-cCcCcEEEecCC-ChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC---CcEEEecCCcCeEEEcCCCCHHHHHHHH
Q 004665 479 DT-VGEKLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNIV 553 (738)
Q Consensus 479 ~a-lP~gvv~vv~~~-~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dADld~Aa~~i 553 (738)
+ +|+|++++++++ ++..+.|..|+++|+|+||||+++++.|++.+. +|+++|+||+||+||++|||++.|++.+
T Consensus 145 -ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i 223 (367)
T cd06534 145 -AGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGA 223 (367)
T ss_pred -cCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 6 899999999964 446777778899999999999999999988764 8999999999999999999999999999
Q ss_pred HHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcccccccCCCCCccccCcccceEEEEEeCCHH
Q 004665 554 IDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 554 v~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
++++|.++| .|+++++||||++++ |+|+++|+ .++.... +++++++||+||||++|++|+|+|
T Consensus 224 ~~~~~~~~gq~C~s~~~v~v~~~~~-~~f~~~l~--------tl~~~~~-------~~~~~~~~E~fgPv~~v~~~~~~~ 287 (367)
T cd06534 224 VFGAFFNAGQICTAASRLLVHESIY-DEFVEKLV--------TVLVDVD-------PDMPIAQEEIFGPVLPVIRFKDEE 287 (367)
T ss_pred HHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHhhc--------eeeeCCC-------CCCccccCCccCceEEEEecCCHH
Confidence 999999987 999999999999999 79998887 2221100 245789999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC-CCCCcccCccccccccccccccchhHHhhcceee
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 711 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K 711 (738)
|||+++|++++||++||||+|...++++++++++|.|+||+++.. .+..||||.++||+|. ++|++++++||+.|
T Consensus 288 eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~k 363 (367)
T cd06534 288 EAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRTK 363 (367)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceEE
Confidence 999999999999999999999999999999999999999998777 7788999999998863 47999999999999
Q ss_pred EEE
Q 004665 712 WIL 714 (738)
Q Consensus 712 ~v~ 714 (738)
++.
T Consensus 364 ~i~ 366 (367)
T cd06534 364 TVV 366 (367)
T ss_pred EEe
Confidence 874
No 128
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-57 Score=473.43 Aligned_cols=408 Identities=43% Similarity=0.733 Sum_probs=389.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHH
Q 004665 314 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 393 (738)
Q Consensus 314 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~ 393 (738)
.++.+..++||+|++..+.++.++|.+.|.++|+.|+++.++|.+++.+|+..++++|.++++++|+..+..+++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 46788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHH
Q 004665 394 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 473 (738)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~ 473 (738)
++..+.+++|+|+.+..+..++|...+.+|.|+|||++|+..+|++++...+.||++||+||||.+..+-.|+..|++++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i 162 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVI 162 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHH
Confidence 99999999999998887777889999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCc-cCcCcEEEec--CCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHHH
Q 004665 474 TSAIPDT-VGEKLIGLVT--SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 550 (738)
Q Consensus 474 ~~al~~a-lP~gvv~vv~--~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~Aa 550 (738)
+++|.++ +|++.||+++ +++.+.++|..+..||+|...||....+.|.+.+..||+..+-|++++||+++||+|.|.
T Consensus 163 ~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~ 242 (417)
T COG0014 163 QEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKAL 242 (417)
T ss_pred HHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHH
Confidence 9999999 9999999998 377899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccccCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCccccccc-C---CCCCccccCcccceEEEE
Q 004665 551 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I---PETRLFHHEYNSMVCTVE 626 (738)
Q Consensus 551 ~~iv~~~f~n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v---~~~~i~~eE~FGPVl~v~ 626 (738)
+.++++|......|+|.+.++||+.++ ++|+.+|.+.+.+.|+++.|++....++| . .+..-|..|+.-++++|.
T Consensus 243 ~ii~nAKtqrPs~CNA~EtLLVh~~ia-~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ilavk 321 (417)
T COG0014 243 KIIVNAKTQRPSVCNAAETLLVHRAIA-KSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILAVK 321 (417)
T ss_pred HHHHcccCCCCcccchHHHHHcCHHHH-HHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeEEE
Confidence 999999999999999999999999999 89999999999999999988876555555 2 256789999999999999
Q ss_pred EeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhh
Q 004665 627 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 706 (738)
Q Consensus 627 ~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ 706 (738)
.++++||||+++|.++.+||-+|.|+|...+++|.+++++-.|+||.++++.+++.||+|.+.|+|+++.|.+||.|+++
T Consensus 322 vVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~ 401 (417)
T COG0014 322 VVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEA 401 (417)
T ss_pred EeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEEEcCccccc
Q 004665 707 LLTTRWILRGNGHVVD 722 (738)
Q Consensus 707 ft~~K~v~~~~~~~~~ 722 (738)
+|..|++..+.|++|+
T Consensus 402 LTs~Kyiv~G~Gqvr~ 417 (417)
T COG0014 402 LTSYKYIVRGDGQVRP 417 (417)
T ss_pred hcceeEEEeCCceecC
Confidence 9999999999999874
No 129
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.9e-55 Score=459.34 Aligned_cols=364 Identities=15% Similarity=0.180 Sum_probs=303.1
Q ss_pred HHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHH
Q 004665 313 QVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSL 390 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~ 390 (738)
-.||++|+++|+.||+ .|+++|..+|.+.|.++|+++++|.|||+.+...|-+.. ++.++ ...+...
T Consensus 458 v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagav----ytlal-------kthvgms 526 (881)
T KOG2452|consen 458 VTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAV----YTLAL-------KTHVGMS 526 (881)
T ss_pred hhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccce----eeeee-------hhhcCce
Confidence 5689999999999997 699999999999999999999999999998766554321 11111 1245667
Q ss_pred HHHHHHHhhcccc-cccccccc-ccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHH
Q 004665 391 AKSIRILADMEEP-IGQILKRT-ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSN 466 (738)
Q Consensus 391 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~ 466 (738)
++.+||+++|.+. .|.++|.. .+++...+.++++|+|||++|+|| ||+ ++.||.+.+|+|- +
T Consensus 527 i~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~---~----------- 592 (881)
T KOG2452|consen 527 IQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ---V----------- 592 (881)
T ss_pred ehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH---H-----------
Confidence 7788888888764 45555422 123344678899999999999998 686 4579999888852 1
Q ss_pred HHHHHHHHhhCCCccCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC----CcEEEecCCcCeEEEc
Q 004665 467 AILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK----IPVLGHADGICHVYVD 541 (738)
Q Consensus 467 ~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~----~p~~lElGGk~p~iV~ 541 (738)
..++|+ .||+|+++| +.-+++-|..||+|++|-|||||++|+.||++|+ |+|.|||||++|+|++
T Consensus 593 ~k~~e~----------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iif 662 (881)
T KOG2452|consen 593 LKFAEL----------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIF 662 (881)
T ss_pred hhhhhh----------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEE
Confidence 123332 489999995 7788999999999999999999999999999984 8999999999999999
Q ss_pred CCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc--------------------------
Q 004665 542 KSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------- 594 (738)
Q Consensus 542 ~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~-------------------------- 594 (738)
.||||++|++....+.|+|-| .|++.-|+||.+||+ |+|+++++++++++.+
T Consensus 663 ad~dl~kav~~~~~~vff~kgenciaagr~fi~~sih-d~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~ 741 (881)
T KOG2452|consen 663 ADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIH-DEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYC 741 (881)
T ss_pred ecCcHHHHHHhhccceeecCCcchhhhcceeehhhhh-HHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999 7999999999998743
Q ss_pred --------ee-ecCCcc--cc-cc-c-C-----CCCCccccCcccceEEEEEeC--CHHHHHHHHHcCCCCcEEEEEecC
Q 004665 595 --------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAED 653 (738)
Q Consensus 595 --------~~-~g~~~~--~~-~~-p-v-----~~~~i~~eE~FGPVl~v~~~~--~~dEAi~~aN~~~~GLsa~VfT~d 653 (738)
++ +|+.+. .+ || | | +.|-+..||.||||+.|-+|+ |+|+.++.+|+++|||+++|||+|
T Consensus 742 ~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd 821 (881)
T KOG2452|consen 742 QHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRD 821 (881)
T ss_pred HHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecc
Confidence 11 233222 12 33 3 3 246788999999999999996 678999999999999999999999
Q ss_pred HHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeEEEEc
Q 004665 654 QKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 716 (738)
Q Consensus 654 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~ 716 (738)
..++.++++.+.+|+|+||.....+...||||.+.||+|. ..|...+.+|..+|+|++.
T Consensus 822 ~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgk----d~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 822 INKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGK----DLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred cchhhhhhhhhccceEEEeeccccccccCCCCcccccccc----chhHHHHhhheeeEEEEee
Confidence 9999999999999999999987777889999999999973 4589999999999999874
No 130
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=4.2e-53 Score=451.44 Aligned_cols=386 Identities=19% Similarity=0.225 Sum_probs=322.6
Q ss_pred hhHHHhhc-CceeEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHH
Q 004665 288 DSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAA 366 (738)
Q Consensus 288 ~~i~~~~t-g~~iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~ 366 (738)
..+.++.+ .+.+|++..++ ++|+++|++.|.+|++.|..+|+.+|+.+|++++++++.+..+|..++.+|-||
T Consensus 129 ~pV~nPad~~dvVG~V~ea~------~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGK 202 (769)
T COG4230 129 RPVINPADPDDIVGTVTEAT------EADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGK 202 (769)
T ss_pred ccccCCCCHhHCeeeeeecC------HHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34444433 35689999988 999999999999999999999999999999999999999999999988876555
Q ss_pred HHhhchhhhHHHHhhccHHHHHHHHHHHHHHhhcccc-ccccccccccCCCceEEEEeeeeeeEEEEeCC-ChHH-HHHH
Q 004665 367 AQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQI 443 (738)
Q Consensus 367 ~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~ 443 (738)
+.. . .+.|++++++.+|||+...+. .+ + ..++|+|+|..|+|| ||+. ....
T Consensus 203 tl~----n--------aIAEVREAVDFlrYYA~~ar~~~g----------~----~~~~~~G~vVcISPWNFPLAIFtGq 256 (769)
T COG4230 203 TLS----N--------AIAEVREAVDFLRYYAGQARDTFG----------N----LTHRPLGPVVCISPWNFPLAIFTGQ 256 (769)
T ss_pred chh----h--------HHHHHHHHHHHHHHHHHHHhcccC----------c----cccCCCCcEEEECCCCchHHHHHhH
Confidence 422 2 246899999999999975431 11 1 347899999999998 6874 4568
Q ss_pred HHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHH
Q 004665 444 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 521 (738)
Q Consensus 444 ~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~ 521 (738)
++.||++||+|+-||+|+||+.+..-.+++++ + +|+|++|+++| ++++|+.|+.+++++.|.|||||+++|.|.
T Consensus 257 iaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~e----AGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~ 332 (769)
T COG4230 257 IAAALAAGNSVLAKPAEQTPLIAAQAVRLLHE----AGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQ 332 (769)
T ss_pred HHHHHHcCCccccCccccccHHHHHHHHHHHH----cCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHH
Confidence 99999999999999999999999999999997 7 99999999997 667999999999999999999999999997
Q ss_pred HhC----C--CcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCc
Q 004665 522 EST----K--IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 594 (738)
Q Consensus 522 ~~a----~--~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~ 594 (738)
++- + .|++.|.||-|++||+.+|--|+++..++.|+|..+| +|.+..-++++++++ |..++.|+-++.++.+
T Consensus 333 ~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvA-d~~l~mLKGAm~el~~ 411 (769)
T COG4230 333 RQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVA-DRILTMLKGAMAELRV 411 (769)
T ss_pred HHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHH-HHHHHHHHHHHHHhcc
Confidence 653 2 7899999999999999999999999999999999988 999999999999999 7999999999988743
Q ss_pred e----e---ecC---Cc----------------------------ccc-cc-c-C---CCCCccccCcccceEEEEEeC-
Q 004665 595 G----L---FGG---PR----------------------------ASK-LL-Q-I---PETRLFHHEYNSMVCTVEIVD- 629 (738)
Q Consensus 595 ~----~---~g~---~~----------------------------~~~-~~-p-v---~~~~i~~eE~FGPVl~v~~~~- 629 (738)
. + +|. .+ ..+ |+ | + +.-..++.|+|||||.|++|+
T Consensus 412 G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy~~ 491 (769)
T COG4230 412 GNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRYKR 491 (769)
T ss_pred CCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEecH
Confidence 1 0 010 00 001 12 2 1 223457899999999999995
Q ss_pred -CHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC--CCCCcccCccccccccccccccchhHHhh
Q 004665 630 -DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEG 706 (738)
Q Consensus 630 -~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ 706 (738)
++|+.|+-+|.++|||+.+|||+-.+.+.++.+++.+|++|||..... ....||||-+-||.|- ..+|+..+..
T Consensus 492 ~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGP---KAGGp~YL~R 568 (769)
T COG4230 492 DELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGP---KAGGPLYLLR 568 (769)
T ss_pred HHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCC---CCCChHHHHH
Confidence 889999999999999999999999999999999999999999986543 2346999877676642 4579999998
Q ss_pred cceeeEE
Q 004665 707 LLTTRWI 713 (738)
Q Consensus 707 ft~~K~v 713 (738)
|+..+..
T Consensus 569 l~~~~p~ 575 (769)
T COG4230 569 LVSERPW 575 (769)
T ss_pred HHhcCCc
Confidence 8877653
No 131
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-48 Score=393.41 Aligned_cols=422 Identities=63% Similarity=0.969 Sum_probs=387.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHHHHH
Q 004665 316 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 395 (738)
Q Consensus 316 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~ 395 (738)
+++..+.||++++..+.++.++|.++|++++++|+.+..+|.+++.+|+..+++.|+.++++.|+......+..+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35666789999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred HHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHh
Q 004665 396 ILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 475 (738)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~ 475 (738)
.+++..+++|+.+.......+...+.+-.|+||.++|+...|-......+.|+++||.+++|....+..+...|.+++++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~ 161 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQE 161 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHH
Confidence 99998899998765444457788888899999999999999987777778899999999999999999999999999999
Q ss_pred hCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCCcEEEecCCcCeEEEcCCCCHHHHHHHHH
Q 004665 476 AIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 554 (738)
Q Consensus 476 al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADld~Aa~~iv 554 (738)
++.+. .|.+.+|+|+..+++.++|..+..||+|...||+...|.|...+.+||+..--|-+.+||++|||+++|.+.+.
T Consensus 162 al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~ 241 (433)
T KOG4165|consen 162 ALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVR 241 (433)
T ss_pred HhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHh
Confidence 99888 89999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred HHccccCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcccccccC--CCCCccccCcccceEEEEEeCCHH
Q 004665 555 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVR 632 (738)
Q Consensus 555 ~~~f~n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~i~~eE~FGPVl~v~~~~~~d 632 (738)
.++..+.-.|+|.+.++||++..-..|.+.+...++..|+++.++++...+.-+ |...-|+.|+-.-.++|-.+++.+
T Consensus 242 DaK~dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~ 321 (433)
T KOG4165|consen 242 DAKCDYPAACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEVVDSVQ 321 (433)
T ss_pred cccCCCchhhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeeecccHH
Confidence 999998889999999999998432589999999999999999888765433223 345678889888899999999999
Q ss_pred HHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCCCCCCcccCccccccccccccccchhHHhhcceeeE
Q 004665 633 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 712 (738)
Q Consensus 633 EAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~ 712 (738)
+||..+|.++.+|+-+|.|+|.+.|++|.+++++..|+.|.++++.+++.||.|.+.|+|+++.|.+||.|++.++.+||
T Consensus 322 ~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw 401 (433)
T KOG4165|consen 322 SAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKW 401 (433)
T ss_pred HHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCccccc---CCCCceeeeccccCC
Q 004665 713 ILRGNGHVVD---GDQGVVYTHKNLALQ 737 (738)
Q Consensus 713 v~~~~~~~~~---~~~~~~~~~~~~~~~ 737 (738)
+..+.+++.. .+++.+|+|+++|++
T Consensus 402 ~lRG~gqvvsd~~~~G~~~y~H~~l~i~ 429 (433)
T KOG4165|consen 402 LLRGKGQVVSDFNEGGKRAYLHEDLPID 429 (433)
T ss_pred EEecCCceeccccCCCceeeeecCCChh
Confidence 9999999773 577999999999986
No 132
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.1e-49 Score=402.21 Aligned_cols=395 Identities=17% Similarity=0.199 Sum_probs=326.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhhhHHHHhhccHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 392 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~~ 392 (738)
-+|-+.++..|++|++.|...|...|.++.+++.|.|+...+.|.++...+|+|-...| ..|+++.++
T Consensus 54 v~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaeg------------vgevqeyvd 121 (507)
T KOG2453|consen 54 VQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEG------------VGEVQEYVD 121 (507)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhc------------chhHHHHHH
Confidence 67889999999999999999999999999999999999999999999887776653322 346777888
Q ss_pred HHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC-ChH-HHHHHHHHHHHhCCEEEEeCCcccHHHHHHH
Q 004665 393 SIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 469 (738)
Q Consensus 393 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l 469 (738)
.+.+..++.+.. |...|.. .++......+.|+|+|++|+.+ ||. .-.|.-+.|+.+||+|++||++.+|+++...
T Consensus 122 icdyavglsr~l~g~i~pse--rpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAv 199 (507)
T KOG2453|consen 122 ICDYAVGLSRSLEGKIFPSE--RPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAV 199 (507)
T ss_pred HHHHhhhhhhhhCCcccCCC--CCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHH
Confidence 888777666544 4444432 2455556789999999999985 785 4456666799999999999999999999999
Q ss_pred HHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC---CCcEEEecCCcCeEEEcCCCC
Q 004665 470 HKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSAN 545 (738)
Q Consensus 470 ~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dAD 545 (738)
.+++.+.|.+- +|++......|..+.+..+..+.+++.++||||+++||.+.+.- .-+.+|||||||+.||++|||
T Consensus 200 tklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edad 279 (507)
T KOG2453|consen 200 TKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDAD 279 (507)
T ss_pred HHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEecccc
Confidence 99999999888 99998888888888899999999999999999999999986653 357889999999999999999
Q ss_pred HHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCce-------e---------------------
Q 004665 546 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------L--------------------- 596 (738)
Q Consensus 546 ld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~-------~--------------------- 596 (738)
|..++...++++...+| +|+...|++||+++| |+.+++|+++.++..+. +
T Consensus 280 l~lvvps~lfaavgtagqrctt~rrl~~hesvy-d~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak 358 (507)
T KOG2453|consen 280 LNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVY-DQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAK 358 (507)
T ss_pred ceeeehHHHHHHhcccccchhhhhHHHhhHHHH-HHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHH
Confidence 99999999999999988 999999999999999 79999999888765320 1
Q ss_pred -------ecCC---cccccc-c-C----CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHH
Q 004665 597 -------FGGP---RASKLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 660 (738)
Q Consensus 597 -------~g~~---~~~~~~-p-v----~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~ 660 (738)
.|+. +...|+ | | .+.++..+|.|.|||.|.+|.+++||+++-|..+.||+++|||+|..++.|+
T Consensus 359 ~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw 438 (507)
T KOG2453|consen 359 ASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRW 438 (507)
T ss_pred hcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhh
Confidence 1111 111122 4 2 3578899999999999999999999999999999999999999999999998
Q ss_pred HH--hcceeEEEECCCCCCC-CCCcccCccccccccccccccchhHHhhcceeeEEEEcCcccccCCCC
Q 004665 661 LC--QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQG 726 (738)
Q Consensus 661 ~~--~l~~G~V~iN~~~~~~-~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~~~~~~~~~~~~ 726 (738)
.- .-++|.|.||.++... -+..|||-++.|-| ++.|..+.++|++..+-+++++..-+--|+
T Consensus 439 ~gpkgsdcgivnvniptsgaeiggafggek~tggg----resgsdswkqymrrstctinyskelplaqg 503 (507)
T KOG2453|consen 439 MGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDSWKQYMRRSTCTINYSKELPLAQG 503 (507)
T ss_pred hCCCCCccceEEecCCCCchhhcccccCccccCCC----cccCchHHHHHHhhceeeeeccccCchhhc
Confidence 74 7899999999987643 45678887776543 567899999999998888887654443333
No 133
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-44 Score=371.04 Aligned_cols=388 Identities=17% Similarity=0.188 Sum_probs=295.2
Q ss_pred eEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHHHHHHHhhchhhhHH
Q 004665 299 VGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAAQEAGYAKSLV 377 (738)
Q Consensus 299 iGTvi~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~eel~~~~~~d~~~~~~~g~~~~~~ 377 (738)
+..+..++ ..+|++|+++|.+|++.|..+|..+|.++++|.|+++. +.+-+|..+.. ++.+|. ..++.+
T Consensus 87 lA~~~yA~------~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatM--lgqgKt--~~qAei 156 (561)
T KOG2455|consen 87 LAKVYYAT------KKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATM--LGQGKT--AIQAEI 156 (561)
T ss_pred hhheeecc------HHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHH--hcCCcc--hHHHHH
Confidence 34455555 78999999999999999999999999999999999998 66666655433 333332 112211
Q ss_pred HHhhccHHHHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeee-eeEEEEeCCCh-HHHH-HHHHHHHHhCCEE
Q 004665 378 SRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPL-GVLLIVFESRP-DALV-QIASLAIRSGNGL 454 (738)
Q Consensus 378 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~~P-~~~~-~~~~~ALaaGNtV 454 (738)
....+.++.+|..+..+.......+ .....+......++|+ |-|++|+||+- .+.. -..+|||+ ||+|
T Consensus 157 -------Da~~eLidf~R~na~ya~eL~~~qp-i~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~V 227 (561)
T KOG2455|consen 157 -------DAAAELIDFFRFNAKYASELYAQQP-ISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVV 227 (561)
T ss_pred -------HHHHHHHHHHHHhHHHHHHhhhcCC-ccccCCCCcceeeccccceeEEecccceeeeccccccChhhh-ccee
Confidence 1233444555543322111100000 0001233344567888 99999999754 3333 34567775 9999
Q ss_pred EEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecC-CChhhHhhhcCCCcCEEEeecCHHHHHHHHHhC--------
Q 004665 455 LLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-------- 524 (738)
Q Consensus 455 VlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a-------- 524 (738)
++|||-.+.++++++-++++| | +|+|++|.|++ +...++.+..+|.+.++.||||+.+-|.+.+.-
T Consensus 228 LwkPS~ta~lssYii~~il~E----AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~ 303 (561)
T KOG2455|consen 228 LWKPSDTAALSSYIIYRILRE----AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYR 303 (561)
T ss_pred eecccchhHHHHHHHHHHHHH----cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999997 7 99999999994 677888888999999999999999988886553
Q ss_pred -CCcEEEecCCcCeEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCce-------
Q 004665 525 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------- 595 (738)
Q Consensus 525 -~~p~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~------- 595 (738)
--+++.|.||||--+|+++||++.++...++|+|..+| .|.|.+|+||++++. +.+.++|+++-.++.+.
T Consensus 304 ~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~w-p~i~e~l~~~~~q~~igd~~~d~~ 382 (561)
T KOG2455|consen 304 TFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLW-PQIREELVEEHSQLKIGDPVIDFS 382 (561)
T ss_pred cchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhc-HHHHHHHHHHHhhcccCCcccccc
Confidence 25789999999999999999999999999999998887 999999999999999 89999998877765321
Q ss_pred ------------------------------eecCCcc--cccc--c-C-----CCCCccccCcccceEEEEEeC--CHHH
Q 004665 596 ------------------------------LFGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVD--DVRA 633 (738)
Q Consensus 596 ------------------------------~~g~~~~--~~~~--p-v-----~~~~i~~eE~FGPVl~v~~~~--~~dE 633 (738)
+.||... .++| | | |.+++|.||+|||||+|+-|+ +++|
T Consensus 383 ~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E 462 (561)
T KOG2455|consen 383 TFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDE 462 (561)
T ss_pred chhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHH
Confidence 1233211 2344 5 2 568999999999999999996 5799
Q ss_pred HHHHH-HcCCCCcEEEEEecCHHHHHHHHH--hcceeEEEECCCCCC--CCCCcccCccccccccccccccchhHHhhcc
Q 004665 634 AIDHI-HQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLL 708 (738)
Q Consensus 634 Ai~~a-N~~~~GLsa~VfT~d~~~a~~~~~--~l~~G~V~iN~~~~~--~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft 708 (738)
++.++ |.++|||+.+||++|.+...+..+ +..+|+.+||+-.+. ....||||.+.||... ..+|++-+..||
T Consensus 463 ~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND---KaGgp~~l~Rwt 539 (561)
T KOG2455|consen 463 VLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND---KAGGPHYLLRWT 539 (561)
T ss_pred HHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC---CCCCceEEEeec
Confidence 99998 678999999999999999888876 567999999985543 2457999999988752 245777666777
Q ss_pred eeeEE
Q 004665 709 TTRWI 713 (738)
Q Consensus 709 ~~K~v 713 (738)
.+++|
T Consensus 540 Sp~~i 544 (561)
T KOG2455|consen 540 SPLSI 544 (561)
T ss_pred Ccchh
Confidence 76654
No 134
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=359.32 Aligned_cols=256 Identities=42% Similarity=0.662 Sum_probs=234.3
Q ss_pred hccCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccc
Q 004665 11 VKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 11 ~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l 90 (738)
+++.+++|||+|.|++++..+.++...+..++++|++|+++|++||||.+|+...|...|++..++ ..+..
T Consensus 3 ~~~~~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSGAiaaG~~~Lg~~~rp----~~l~~----- 73 (369)
T COG0263 3 LSSARRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSGAIAAGRTRLGLPKRP----KTLAE----- 73 (369)
T ss_pred CCcceEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccchhhhChhhcCCCCCC----cchHH-----
Confidence 567889999999999999977899999999999999999999999999999999999888877654 35655
Q ss_pred hHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccccc
Q 004665 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTH 170 (738)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~ 170 (738)
+|+++++||..+|..|++.|..+|+..+|+++|..||.++.++.|...+|+.||+.|.|||+|+||+++..+
T Consensus 74 -kQA~AAVGQ~~Lm~~y~~~f~~~g~~v~QiLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDtva~~E------- 145 (369)
T COG0263 74 -KQAAAAVGQVRLMQLYEELFARYGIKVGQILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDTVATEE------- 145 (369)
T ss_pred -HHHHHHhCHHHHHHHHHHHHHhcCCeeeEEEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCceeeee-------
Confidence 459999999999999999999999999999999999999999999999999999999999999999999843
Q ss_pred ccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCc-ccCCccccceeeccc-hHHH
Q 004665 171 KDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAK-HQAE 248 (738)
Q Consensus 171 ~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP-~~~~a~~i~~i~~~e-~~~~ 248 (738)
-+|+|||++++.+|...+||.|+++||+||+|++|| ++|++++|++++... ..+.
T Consensus 146 -----------------------ikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~~ 202 (369)
T COG0263 146 -----------------------IKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIEA 202 (369)
T ss_pred -----------------------eeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHHH
Confidence 257999999999999999999999999999999999 599999999997532 3335
Q ss_pred HhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 249 ITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 249 i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
+..++.+..+||||..|+++|..|.++|++++|.+|..|+.+.+++.++..||++.+.
T Consensus 203 ~aggsgs~~GTGGM~TKl~AA~iA~~aG~~~iI~~g~~~~~i~~~~~~~~~GT~F~~~ 260 (369)
T COG0263 203 MAGGSGSELGTGGMRTKLEAAKIATRAGVPVIIASGSKPDVILDALEGEAVGTLFEPQ 260 (369)
T ss_pred HhcCCCCCCCcccHHHHHHHHHHHHHcCCcEEEecCCCcchHHHHHhCCCCccEEecC
Confidence 6667778899999999999999999999999999999999999999999999999977
No 135
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-43 Score=338.92 Aligned_cols=273 Identities=56% Similarity=0.826 Sum_probs=244.7
Q ss_pred hHHhhccCCeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccC
Q 004665 7 SRAFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQK 85 (738)
Q Consensus 7 ~~~~~~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~ 85 (738)
.|+++|+.++||||+|.+++++++. .+...++..+++++.+|+++|++|+||.+||..+|+++|++...++.+.+.+..
T Consensus 2 ~r~~~kka~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~s~s~r~~l~ 81 (285)
T KOG1154|consen 2 KRAFLKKAYRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLPSSSMRQTLK 81 (285)
T ss_pred cchhhccceEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhccchhHHHhhC
Confidence 4678999999999999999999886 488999999999999999999999999999999999989887776545554433
Q ss_pred ccc-cchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCC
Q 004665 86 PQN-ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (738)
Q Consensus 86 ~~~-~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~ 164 (738)
.++ ...+++++++||.++|.+|+..|.++|+..+|++++..||.+...+.|...+|++||..|.|||+|+||.++++++
T Consensus 82 ~~~~l~e~rA~AAvGQ~~Lmalye~lF~Qy~~~iAQvLvT~~Di~d~~~r~Nl~~Ti~eLL~m~viPIvNeNDavs~~~~ 161 (285)
T KOG1154|consen 82 PQSELAEKRACAAVGQSGLMALYETLFTQYGITIAQVLVTRNDILDEQQRKNLQNTISELLSMNVIPIVNENDAVSPREI 161 (285)
T ss_pred CccchhhHHHHHHhCcchHHHHHHHHHHHhccchheeeecCcchhhHHHHHHHHHHHHHHHhCCceeeecCCCccCCccc
Confidence 333 4466799999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred CcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccc
Q 004665 165 PYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAK 244 (738)
Q Consensus 165 ~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e 244 (738)
|++ | .-|||++|+.+|.+++||.||++|||+|+|+++|.....++|+..+..+
T Consensus 162 ~~~-----------------------D----~~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~ 214 (285)
T KOG1154|consen 162 PFG-----------------------D----SSDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGD 214 (285)
T ss_pred ccC-----------------------C----CCcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCC
Confidence 432 1 1469999999999999999999999999999888766678999999988
Q ss_pred hHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 245 HQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 245 ~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
..-.+.+|+++..++|||..|+.+|..|...|++|+|++|..|+.|.+++.|..+||.+...
T Consensus 215 ~~v~~tfG~~SkvGtGGM~tKv~AA~~A~~~Gv~viI~~g~~p~~I~~iv~g~kvgt~f~~~ 276 (285)
T KOG1154|consen 215 PQVSTTFGSKSKVGTGGMETKVKAAVNALNAGVSVIITNGDAPENITDIVEGKKVGTFFEQL 276 (285)
T ss_pred CCCccccCccCccCcCcchhhHHHHHHHhcCCceEEEeCCCChHHHHHHHhhhhhhhhhhhc
Confidence 77678899999999999999999999999999999999999999999999999999987755
No 136
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00 E-value=5e-41 Score=353.75 Aligned_cols=269 Identities=58% Similarity=0.849 Sum_probs=228.2
Q ss_pred hccCCeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc-------CCccc
Q 004665 11 VKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN-------SSLAD 82 (738)
Q Consensus 11 ~~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~-------~~~~~ 82 (738)
+...+++|||+|||+|+++++ +++.+.+..++++|+.|++.|++||||.||+..+|+.+++.+.... .+...
T Consensus 5 ~~~~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~~~ 84 (284)
T cd04256 5 LKHAKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQL 84 (284)
T ss_pred hccCCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccccc
Confidence 556789999999999999876 7999999999999999999999999999999999998887664311 11111
Q ss_pred ccCccccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceecc
Q 004665 83 LQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (738)
Q Consensus 83 ~~~~~~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~ 162 (738)
++.....+++++++++||..+|.+|++.|+++++++.|++++..||.++..+.|..+.|+.||+.|+|||+++||+|++.
T Consensus 85 ~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~~~~~~~q~llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVi~~nD~v~~~ 164 (284)
T cd04256 85 KDMPQMELDGRACAAVGQSGLMALYEAMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAVSPP 164 (284)
T ss_pred cCCcchhHHHHHHHHcccHHHHHHHHHHHHHcCCcHHHeeeeccccccHHHHHHHHHHHHHHHHCCCEEEEeCCCccccc
Confidence 22222345678999999999999999999999999999999999999988888889999999999999999999998863
Q ss_pred CCCcccccccccccccccccccccccccCCCc--eecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCcccccee
Q 004665 163 KAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG--IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTY 240 (738)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g--~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i 240 (738)
.. . +. +..+ .++|+|++|+++|.+|+||+|+|+|||||||++||++|++++|+++
T Consensus 165 ~~---~-------~~-------------~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i 221 (284)
T cd04256 165 PE---P-------DE-------------DLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTF 221 (284)
T ss_pred cc---c-------cc-------------cccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccc
Confidence 10 0 00 0111 3599999999999999999999999999999999988999999999
Q ss_pred eccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 241 IRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 241 ~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
+..+.. .+..+..+..++|||.+|+++|..+.++|++++|+||..|+.+.+++.|+..||++
T Consensus 222 ~~~~~~-~~~~~~~s~~gtGGM~~Kl~Aa~~a~~~Gi~v~I~~G~~~~~i~~~l~G~~~GT~~ 283 (284)
T cd04256 222 YPGDQQ-SITFGTKSRVGTGGMEAKVKAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFF 283 (284)
T ss_pred cHhHHH-HhhcccccCcccCCcHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHcCCCCCEEe
Confidence 987764 34444445678999999999999999999999999999999999999999899986
No 137
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=2.4e-39 Score=339.05 Aligned_cols=257 Identities=39% Similarity=0.648 Sum_probs=220.0
Q ss_pred hhccCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCcccc
Q 004665 10 FVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (738)
Q Consensus 10 ~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~ 89 (738)
.+++++++||||||+++++++++++.+++.+++++|+.+++.|+++|||.+|+..+|+..++.+..+ ..+.
T Consensus 5 ~~~~~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~~~~~~----~~~~----- 75 (266)
T PRK12314 5 QLENAKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKLKLDKRP----TSLA----- 75 (266)
T ss_pred hHhhCCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceeeccccCC----CCHH-----
Confidence 3556789999999999998877899999999999999999999999998778888898766654332 1122
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccc
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVT 169 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~ 169 (738)
.+++++++||..++.+|...|+++|++++|+++++.||.++..+.|..+.|+.||++|+|||+++||.++..+
T Consensus 76 -~~~a~aa~Gq~~l~~~~~~~~~~~g~~~~q~llT~~~~~~~~~~~~~~~~l~~ll~~g~IPVv~~nd~v~~~~------ 148 (266)
T PRK12314 76 -EKQALAAVGQPELMSLYSKFFAEYGIVVAQILLTRDDFDSPKSRANVKNTFESLLELGILPIVNENDAVATDE------ 148 (266)
T ss_pred -HHHHHHHHhHHHHHHHHHHHHHHcCCeEEEEEEecccccchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeecc------
Confidence 2468999999999999999999999999999999999988777778889999999999999999999887631
Q ss_pred cccccccccccccccccccccCCCc-eecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeec--cch
Q 004665 170 HKDTSLENYLKPFRSSFLCFYDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKH 245 (738)
Q Consensus 170 ~~~~~~~g~~~p~~~~~~~~~~~~g-~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~--~e~ 245 (738)
.+ .++++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++|+. .+.
T Consensus 149 -----------------------~~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~ 205 (266)
T PRK12314 149 -----------------------IDTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEI 205 (266)
T ss_pred -----------------------ccceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHH
Confidence 11 258899999999999999999999999999999995 899999999986 333
Q ss_pred HHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 246 QAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 246 ~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
. ++..++.+.+++|||.+|+++|..+.++|++|+|+||+.|+.+.++++|+..||++.+.
T Consensus 206 ~-~~~~~~~~~~~tGGM~~Kl~aa~~a~~~gv~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 265 (266)
T PRK12314 206 L-ALAGGAGSKFGTGGMVTKLKAAKFLMEAGIKMVLANGFNPSDILDFLEGESIGTLFAPK 265 (266)
T ss_pred H-HHhccCCCCcccCchHHHHHHHHHHHHCCCeEEEEcCCCchHHHHHHcCCCCceEEccC
Confidence 3 23333345578999999999999999999999999999999999999998899998754
No 138
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=4.8e-39 Score=348.59 Aligned_cols=252 Identities=37% Similarity=0.566 Sum_probs=219.0
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchH
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDG 92 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~ 92 (738)
+++++||||||+++++.++.++.+.+..++++|+.|+++|+++|||||||+.+|...++... ++ .+. .+
T Consensus 4 ~~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~~~l~~~~----~~-~~~------~~ 72 (368)
T PRK13402 4 NWKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGYHKLGFID----RP-SVP------EK 72 (368)
T ss_pred CCcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCccccCCCC----CC-Ccc------HH
Confidence 45799999999999987778999999999999999999999999999999888875444322 12 222 34
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccccccc
Q 004665 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKD 172 (738)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~ 172 (738)
++++++||..++..|...|.++|+++.|++++..||.++.++.|+.+.|+.||+.|.|||+++||.++..+
T Consensus 73 qalaavGq~~l~~~~~~~f~~~g~~~aqvLlT~~d~~~~~~y~n~~~~l~~LL~~g~IPIinenD~v~~~e--------- 143 (368)
T PRK13402 73 QAMAAAGQGLLMATWSKLFLSHGFPAAQLLLTHGDLRDRERYINIRNTINVLLERGILPIINENDAVTTDR--------- 143 (368)
T ss_pred HHHHHhhHHHHHHHHHHHHHHCCCeEEEEEEecchhhhHHHHHHHHHHHHHHHHCCcEEEEeCCCcEeecc---------
Confidence 68999999999999999999999999999999999877777777789999999999999999999887632
Q ss_pred ccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeec--cchHHHH
Q 004665 173 TSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKHQAEI 249 (738)
Q Consensus 173 ~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~--~e~~~~i 249 (738)
..|+++|++|+++|.+|+||.|+|+|||||||++||+ +|++++|++|+. +++. .+
T Consensus 144 ---------------------l~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~-~l 201 (368)
T PRK13402 144 ---------------------LKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIY-AM 201 (368)
T ss_pred ---------------------cccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHH-HH
Confidence 1358999999999999999999999999999999995 899999999987 3443 34
Q ss_pred hcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 250 TFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 250 ~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
..++.+..++|||.+|+++|..|.++|++++|+||+.|+.+.++++|+..||++.+.
T Consensus 202 ~~~~~s~~gtGGM~~Kl~Aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 202 AGGAGSNVGTGGMRTKIQAAKIAMSHGIETFIGNGFTADIFNQLLKGQNPGTYFTPE 258 (368)
T ss_pred hcccccCcCcCCchHHHHHHHHHHHcCCcEEEEcCCCchHHHHHhcCCCCceEEecC
Confidence 444445688999999999999999999999999999999999999999899999876
No 139
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=5.6e-38 Score=343.34 Aligned_cols=257 Identities=43% Similarity=0.665 Sum_probs=218.2
Q ss_pred HhhccCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccc
Q 004665 9 AFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQN 88 (738)
Q Consensus 9 ~~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~ 88 (738)
..+++++++|||||||++++++++++.+.+..++++|++++++|+++||||||+...+...+++.. .+..+..
T Consensus 3 ~~~~~~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sGai~~g~~~l~l~~----~~~~~~~--- 75 (372)
T PRK05429 3 QALSDARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSGAVAAGRERLGLPE----RPKTLAE--- 75 (372)
T ss_pred cchhhCCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEcccHhhhhHhhcCCCC----CCCchHH---
Confidence 345667899999999999998778999999999999999999999999999887555554444332 2222222
Q ss_pred cchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccc
Q 004665 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 89 ~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~ 168 (738)
+++++++||..++..|...|.++|+++.|++++..||.++..+.|..+.|+.||+.|+|||+++||+++..+
T Consensus 76 ---~qa~aavGq~~L~~~~~~~l~~~gi~~~qil~t~~d~~~~~~~ln~~~~i~~Ll~~g~IPVi~~nd~v~~~~----- 147 (372)
T PRK05429 76 ---KQAAAAVGQSRLMQAYEELFARYGITVAQILLTRDDLEDRERYLNARNTLRTLLELGVVPIINENDTVATDE----- 147 (372)
T ss_pred ---HHHHHHHhHHHHHHHHHHHHHHCCCCEEEEEeehhHhhhhhHhhhHHHHHHHHHHCCCEEEEcCCCccceec-----
Confidence 358889999999999999999999999999999988877767777779999999999999999988877631
Q ss_pred ccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeec--cch
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKH 245 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~--~e~ 245 (738)
..++|+|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++++. +|+
T Consensus 148 -------------------------l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~ 202 (372)
T PRK05429 148 -------------------------IKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDEL 202 (372)
T ss_pred -------------------------ccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHH
Confidence 1258999999999999999999999999999999995 799999999987 345
Q ss_pred HHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 246 QAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 246 ~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
.+ +..++.+.+++|||.+|+++|..+.++|++|+|+||+.|+.+.++++|+..||++.+.
T Consensus 203 ~~-~~~~~~~~~gtGGM~~Kl~aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 203 EA-MAGGAGSGLGTGGMATKLEAARIATRAGIPVVIASGREPDVLLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred HH-HhcCCCCCcCcCCcHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHhcCCCCCEEEeeC
Confidence 43 3333445689999999999999999999999999999999999999998899999876
No 140
>PTZ00489 glutamate 5-kinase; Provisional
Probab=100.00 E-value=1.1e-37 Score=324.07 Aligned_cols=252 Identities=33% Similarity=0.516 Sum_probs=211.9
Q ss_pred HhhccCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccc
Q 004665 9 AFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQN 88 (738)
Q Consensus 9 ~~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~ 88 (738)
..+++.+++|||+|||+|++++ .++..++..++++|+.|++ +++||||||||...|...++.... .+
T Consensus 3 ~~~~~~~riVIKlG~Svit~~~-~~~~~~~~~l~~~i~~l~~-~~~vilVssGava~g~~~~~~~~~------~~----- 69 (264)
T PTZ00489 3 DILKSVKRIVVKVGSSILVDNQ-EIAAHRIEALCRFIADLQT-KYEVILVTSGAVAAGYTKKEMDKS------YV----- 69 (264)
T ss_pred hhhhcCCEEEEEeccceeeCCC-CcCHHHHHHHHHHHHHHhc-CCeEEEEecChHhcChhhcCCCcc------cc-----
Confidence 3456788999999999999864 6788899999999999986 799999999997777654433221 12
Q ss_pred cchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccc
Q 004665 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 89 ~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~ 168 (738)
..+++++++||..+|.+|.+.|.++|+.++|++++..|+.++.++.|..+.|+.||+.|.|||++|||.++..
T Consensus 70 -~~~qa~aaiGq~~L~~~y~~~f~~~~~~~aqiLlt~~d~~~~~~~~n~~~~l~~lL~~g~VPIinend~~~~~------ 142 (264)
T PTZ00489 70 -PNKQALASMGQPLLMHMYYTELQKHGILCAQMLLAAYDLDSRKRTINAHNTIEVLISHKVIPIINENDATALH------ 142 (264)
T ss_pred -HHHHHHHHhCHHHHHHHHHHHHHhCCCeEEEeeeeccccccchhhHHHHHHHHHHHHCCCEEEECCCCCcccc------
Confidence 2356999999999999999999999999999999999998888888889999999999999999999877652
Q ss_pred ccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccc---cceeeccc
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKL---IHTYIRAK 244 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~---i~~i~~~e 244 (738)
+..|+|+|++|+++|.+++||+|+|+|||||||++||+ +|++++ +++++.++
T Consensus 143 ------------------------e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~ 198 (264)
T PTZ00489 143 ------------------------ELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDD 198 (264)
T ss_pred ------------------------eeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHH
Confidence 12457999999999999999999999999999999994 788887 55666655
Q ss_pred hHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCc--eeEEEEccC
Q 004665 245 HQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK--RVGTLFHRD 306 (738)
Q Consensus 245 ~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~--~iGTvi~~~ 306 (738)
.. .+ .+..+.+++|||.+|+++|..+.++|++|+|+||+.|+.+.+++.|+ ..||++.+.
T Consensus 199 ~~-~~-~~~~~~~~tGGM~~Kl~aa~~a~~~Gi~v~I~~g~~~~~i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 199 LV-AE-ATPNNRFATGGIVTKLQAAQFLLERGGKMYLSSGFHLEKARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred HH-Hh-cCcCCCcccCChHHHHHHHHHHHHCCCCEEEEeCCCchHHHHHHcCCCCCCceEEeec
Confidence 43 22 23345689999999999999999999999999999999999998764 379999764
No 141
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=100.00 E-value=1.3e-37 Score=324.51 Aligned_cols=247 Identities=50% Similarity=0.734 Sum_probs=211.1
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHHH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (738)
++||||||++++++++..+.+++.+++++|+++.+.|+++||||||+..+|+..++....+ ..+. ..+++
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~g~~~~~~~~~~----~~~~------~~~~~ 70 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAAGRQRLGLEKRP----KTLP------EKQAL 70 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhhChhhhccCcCC----Cchh------HHHHH
Confidence 5899999999999877778999999999999999999999999999888887655433221 1111 23588
Q ss_pred HHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccc
Q 004665 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSL 175 (738)
Q Consensus 96 ~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~ 175 (738)
+++||..++.+|...|.++|+++.|+++++.+|.+...+.+..+.|+.||+.|+|||+++||++++.+
T Consensus 71 ~~~Gq~~l~~~~~~~l~~~Gi~~~q~l~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~~~d~v~~~~------------ 138 (251)
T cd04242 71 AAVGQSLLMALYEQLFAQYGIKVAQILLTRDDFEDRKRYLNARNTLETLLELGVIPIINENDTVATEE------------ 138 (251)
T ss_pred HHHhHHHHHHHHHHHHHHcCCeEEEEEEehhHhcchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeeec------------
Confidence 99999999999999999999999999999888876555556678999999999999999988887621
Q ss_pred cccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceee--ccchHHHHhcC
Q 004665 176 ENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYI--RAKHQAEITFG 252 (738)
Q Consensus 176 ~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~--~~e~~~~i~~~ 252 (738)
. .++|+|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++++ .+|+.+ +..+
T Consensus 139 -----------------~-~~~~~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~-~~~~ 199 (251)
T cd04242 139 -----------------I-RFGDNDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEA-MAGG 199 (251)
T ss_pred -----------------c-ccCChHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHH-Hhcc
Confidence 1 148999999999999999999999999999999995 78999999999 777764 3333
Q ss_pred CCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 253 DKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 253 ~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
..+.+++|||.+|++++..+.++|++|+|+||+.|+.+.++++|+..||++
T Consensus 200 ~~~~~~tggm~~Kl~a~~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i 250 (251)
T cd04242 200 SGSSVGTGGMRTKLKAARIATEAGIPVVIANGRKPDVLLDILAGEAVGTLF 250 (251)
T ss_pred cCcCcccCCcHHHHHHHHHHHHCCCcEEEEcCCCCCHHHHHHcCCCCCeEe
Confidence 345789999999999999999999999999999999999999998899986
No 142
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=100.00 E-value=1.5e-37 Score=338.62 Aligned_cols=252 Identities=43% Similarity=0.648 Sum_probs=217.0
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHH
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 94 (738)
+++|||||||+++++++.++.+.+..++++|+.+.++|+++|||||||...+...++.... +..+.. +++
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~~~g~~~lg~~~~----~~~l~~------~qa 70 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAIAAGFEALGLPER----PKTLAE------KQA 70 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHHhcCccccCCCCC----ccchHH------HHH
Confidence 4799999999999987679999999999999999999999999999997666654543322 223332 358
Q ss_pred HHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccccccccc
Q 004665 95 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTS 174 (738)
Q Consensus 95 ~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~ 174 (738)
++++||..++.+|...|.++|++++|++++..||.++..+.|...+|+.||++|.|||+++||.++..+
T Consensus 71 ~aa~Gq~~l~~~~~~~l~~~Gi~~aqillt~~d~~~~~~~lna~~~i~~Ll~~g~iPVi~end~v~~~~----------- 139 (363)
T TIGR01027 71 LAAVGQVRLMQLYEQLFSQYGIKVAQILLTRADFSDRERYLNARNTLEALLELGVVPIINENDTVATEE----------- 139 (363)
T ss_pred HHHhChHHHHHHHHHHHHHcCCeEEEEEEeccchhhHHHHHHHHHHHHHHHhCCCEEEEeCCCceeeee-----------
Confidence 899999999999999999999999999999999988777888779999999999999999988876521
Q ss_pred ccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCc-ccCCccccceeeccc-hHHHHhcC
Q 004665 175 LENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAK-HQAEITFG 252 (738)
Q Consensus 175 ~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP-~~~~a~~i~~i~~~e-~~~~i~~~ 252 (738)
..++|+|++|+++|.+|+||+|+|+|||||||++|| .+|++++|++++..+ ....+..+
T Consensus 140 -------------------l~~gd~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~ 200 (363)
T TIGR01027 140 -------------------IKFGDNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGD 200 (363)
T ss_pred -------------------cCcCChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcC
Confidence 125799999999999999999999999999999999 599999999998753 33345544
Q ss_pred CCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 253 DKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 253 ~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
+.+.+++|||.+|+++|..|.++|++++|+||+.|+.+.++++|+..||++.+.
T Consensus 201 ~~~~~gtGGM~~Kl~Aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 254 (363)
T TIGR01027 201 SGSSVGTGGMRTKLQAADLATRAGVPVIIASGSKPEKIADALEGAPVGTLFHAQ 254 (363)
T ss_pred CCcCcCcCCchHHHHHHHHHHHCCCeEEEEeCCCccHHHHHhcCCCCcEEEeeC
Confidence 445689999999999999999999999999999999999999999899999876
No 143
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-32 Score=277.95 Aligned_cols=244 Identities=24% Similarity=0.300 Sum_probs=188.9
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHH--HhcccccccCCcccccCccccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQ--RLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~--~l~~~~~~~~~~~~~~~~~~~l 90 (738)
++|++|||+||+++.+++ .+.+++++|..|+..|.++||||||||+++.. .++....+..+.+.++...+++
T Consensus 1 ~~k~~VIK~GG~~~~~~~------l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~~~gie~~f~~glRvTd~~tlev 74 (265)
T COG0548 1 RGKTIVIKLGGSAMEDEN------LLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEFVKGLRVTDAETLEV 74 (265)
T ss_pred CCceEEEEECceeecCch------HHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHHHcCCCCeeeCCEEcCCHHHHHH
Confidence 367999999999999864 37899999999999999999999999999974 3444444445666666666666
Q ss_pred hHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCC----------------CCCcccccccHHHHHHHHHhCCceEEEe
Q 004665 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS----------------DFRDEDFRKQLYDTVQSLLDLRVIPIFN 154 (738)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~----------------d~~~~~~~~~~~~~i~~lL~~g~iPVi~ 154 (738)
..+++...-+.. +.+.|+++|..+..+...++ .|....+.+| .+.|+.+|++|+|||+
T Consensus 75 v~mvl~G~vNk~----iva~l~~~g~~avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn-~~~i~~ll~~~~IpVi- 148 (265)
T COG0548 75 VEMVLGGTVNKE----IVARLSKHGGQAVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVN-PELIERLLDNGAIPVI- 148 (265)
T ss_pred HHHHHHHHHHHH----HHHHHHHhCCcceeeeecCCCEEEEEEcccccccccceeeeEEEEC-HHHHHHHHhCCCceEE-
Confidence 555544222222 44777788876655543332 2333445566 8999999999999999
Q ss_pred CCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCc
Q 004665 155 ENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNS 234 (738)
Q Consensus 155 g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a 234 (738)
+|. +. +..| ++| .+|+|++|..+|.+|+|++|+|+|||+||+++++ ++
T Consensus 149 -----api----a~-----~~~G--~~~-------------NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~-~~-- 196 (265)
T COG0548 149 -----API----AV-----DEDG--ETL-------------NVNADTAAGALAAALKAEKLILLTDVPGVLDDKG-DP-- 196 (265)
T ss_pred -----ecc----eE-----CCCC--cEE-------------eeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCC-Cc--
Confidence 442 21 1122 111 2999999999999999999999999999999864 23
Q ss_pred cccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchhHH-HhhcCceeEEEEc
Q 004665 235 KLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSII-KVLEGKRVGTLFH 304 (738)
Q Consensus 235 ~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i~-~~~tg~~iGTvi~ 304 (738)
.+|++++.+|+.+++.. ..++|||+||+++|.+|+++|++ |||+||+.++.++ .+|++..+||.+.
T Consensus 197 s~i~~~~~~~~~~li~~----~~i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 197 SLISELDAEEAEELIEQ----GIITGGMIPKVEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred eeeccCCHHHHHHHHhc----CCccCccHHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHhcCCCcceEec
Confidence 58999999999987763 36799999999999999999997 9999999999976 5899999999875
No 144
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=99.98 E-value=4.8e-31 Score=279.26 Aligned_cols=243 Identities=22% Similarity=0.323 Sum_probs=188.6
Q ss_pred CeEEEEECccceecCCC----cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccc
Q 004665 15 KRLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~----~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l 90 (738)
|++|||+||++|.+..+ ..+.+++..++++|+.|.++|++||||||||+++|...++..... ..++..
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~----~~~~~~---- 72 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAAD----SEVPAM---- 72 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhcccccc----ccCCCC----
Confidence 58999999999987532 367889999999999999999999999999999998766653322 112211
Q ss_pred hHHHHHHhhhHHHHHHHHHHhh----cCCC------ceeEEEecCCC--CCccccc------------------------
Q 004665 91 DGKACAAVGQSSLMALYDTLFS----QLDV------TSSQLLVTDSD--FRDEDFR------------------------ 134 (738)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~l~----~~gi------~~~~~~~~~~d--~~~~~~~------------------------ 134 (738)
..+++.+.+|..++.+|+..|. ..|+ ...|++++..| |.++.+.
T Consensus 73 p~~~~~A~~qg~lg~~~~~~l~~~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~~~d 152 (310)
T TIGR00746 73 PLDVLGAMSQGMIGYMLQQALNNELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIVKED 152 (310)
T ss_pred cchHHHHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeEeec
Confidence 1247888999998888888887 6673 35667777666 6543322
Q ss_pred ----------------ccHHHHHHHHHhCCc---------eEEEeCCCceeccCCCcccccccccccccccccccccccc
Q 004665 135 ----------------KQLYDTVQSLLDLRV---------IPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCF 189 (738)
Q Consensus 135 ----------------~~~~~~i~~lL~~g~---------iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~ 189 (738)
++..+.|+.||++|. +||+++||.+...
T Consensus 153 ~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~--------------------------- 205 (310)
T TIGR00746 153 AGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGV--------------------------- 205 (310)
T ss_pred CCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEee---------------------------
Confidence 122689999999998 4555444333220
Q ss_pred cCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHH
Q 004665 190 YDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAA 269 (738)
Q Consensus 190 ~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa 269 (738)
+ .++|+|++|+++|.+|+||+|+|+|||||||++ |++|++++|++++.+|+.+.+.. +.+.+|||.+|+++|
T Consensus 206 ---e-~~id~D~lAa~lA~~l~AD~LIiLTDVdGVy~~-~~~p~a~~i~~it~~e~~~~~~~---g~~~tGgM~~Kl~AA 277 (310)
T TIGR00746 206 ---E-AVIDKDLASEKLAEEVNADILVILTDVDAVYIN-YGKPDEKALREVTVEELEDYYKA---GHFAAGSMGPKVEAA 277 (310)
T ss_pred ---E-ecCCHHHHHHHHHHHhCCCEEEEEeCCCceeCC-CCCCCCcCCcCcCHHHHHHHHhc---CCcCCCCcHHHHHHH
Confidence 0 148999999999999999999999999999987 46788999999999888765532 457799999999999
Q ss_pred HHHHHcC-CcEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 270 YCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 270 ~~a~~~g-i~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
..++++| .+++|++ ++.+.+++.|+ .||++.
T Consensus 278 ~~~~~~g~~~v~I~~---~~~i~~~l~G~-~GT~I~ 309 (310)
T TIGR00746 278 IEFVESGGKRAIITS---LENAVEALEGK-AGTRVT 309 (310)
T ss_pred HHHHHhCCCeEEEec---hHHHHHHHCCC-CCcEEe
Confidence 9888875 5699997 78888999999 899875
No 145
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.97 E-value=5.5e-31 Score=275.21 Aligned_cols=244 Identities=23% Similarity=0.333 Sum_probs=179.7
Q ss_pred eEEEEECccceecCCC--cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHH
Q 004665 16 RLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~--~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (738)
++|||+|||+|++++. .++.+.+++++++|+.++ |+++|||||||++ ++..++.+.... +.+..+...+..
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~~-~~~~~~~~g~~~-g~~~~~~~~l~~--- 73 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGSF-GHPKAKEYGLPD-GDGSFSAEGVAE--- 73 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCcc-cCHHHHHhCCCc-CCCchhhhhHHH---
Confidence 4899999999998753 589999999999999887 8999999987764 554444443321 111111111111
Q ss_pred HHHHhhhHHHHHHHHHHhhcCCCceeEE-----EecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccc
Q 004665 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 94 ~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~ 168 (738)
...++ ..++..+.+.|.++|+++..+ ..++ .......+ .+.|+.+|++|+|||+++ |.+...
T Consensus 74 ~~~~~--~~ln~~~~~~l~~~g~~a~~l~~~~~~~~~---~g~~~~~~-~~~l~~ll~~g~iPVi~~-~~~~~~------ 140 (252)
T cd04241 74 THEAM--LELNSIVVDALLEAGVPAVSVPPSSFFVTE---NGRIVSFD-LEVIKELLDRGFVPVLHG-DVVLDE------ 140 (252)
T ss_pred HHHHH--HHHHHHHHHHHHHCCCCeEEEChHHeEEec---CCeeeeec-HHHHHHHHhCCCEEEEcC-CeEecC------
Confidence 11111 244445678888899887643 2221 11222334 889999999999999986 433321
Q ss_pred ccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHH
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 248 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~ 248 (738)
+| +-.++|+|++|+.+|.+|+|++|+|+|||||||++|| |++++|++++.+++.+.
T Consensus 141 -------~~---------------~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~ 196 (252)
T cd04241 141 -------GG---------------GITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDI 196 (252)
T ss_pred -------CC---------------CeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCC--CCCeEcceeCccchHHH
Confidence 01 0124999999999999999999999999999999999 88999999999887754
Q ss_pred Hhc-CCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 249 ITF-GDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 249 i~~-~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
+.. ++.+.+++|||.+|+++|..++++|++++|+||+.++.+.++++|+..||++
T Consensus 197 ~~~~~~~~~~~tGGm~~Kl~aa~~a~~~Gv~v~I~~g~~~~~l~~~l~g~~~GT~i 252 (252)
T cd04241 197 LAALGSAGTDVTGGMAGKIEELLELARRGIEVYIFNGDKPENLYRALLGNFIGTRI 252 (252)
T ss_pred HHhcCcCCccccCCHHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHcCCCCceEC
Confidence 431 2224578999999999999999999999999999999999999998889974
No 146
>PRK12353 putative amino acid kinase; Reviewed
Probab=99.97 E-value=1.4e-30 Score=277.95 Aligned_cols=257 Identities=21% Similarity=0.279 Sum_probs=189.7
Q ss_pred cCCeEEEEECccceecCCC--cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccc
Q 004665 13 DVKRLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~--~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l 90 (738)
+++++||||||++|+++++ +++.+++..++++|+.|.+.|+++|||||||+++|+..++........+ .+.. +
T Consensus 1 ~~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~~~~~~-~~~~----~ 75 (314)
T PRK12353 1 MMKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAAASEKN-KVPA----M 75 (314)
T ss_pred CCcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccccccCC-CCCC----c
Confidence 3679999999999999875 4999999999999999999999999999999999987555432211111 1111 1
Q ss_pred hHHHHHHhhhH----HHHHHHHHHhhcCCC------ceeEEEecCCCCC--cc---------------------------
Q 004665 91 DGKACAAVGQS----SLMALYDTLFSQLDV------TSSQLLVTDSDFR--DE--------------------------- 131 (738)
Q Consensus 91 ~~~~~~~~g~~----~~~~~~~~~l~~~gi------~~~~~~~~~~d~~--~~--------------------------- 131 (738)
..+++++.+|. .++..+...|..+|+ ...|++++.+|+. ..
T Consensus 76 ~~~~~~a~~qg~l~~~l~~~~~~~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~ 155 (314)
T PRK12353 76 PLDVCGAMSQGYIGYHLQNALRNELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKED 155 (314)
T ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeec
Confidence 12355556665 345578889988888 5666777766522 21
Q ss_pred -c-ccccH-----------HHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecc
Q 004665 132 -D-FRKQL-----------YDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWD 198 (738)
Q Consensus 132 -~-~~~~~-----------~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~ 198 (738)
. .+.++ .+.|+.||+.|+|||+.|...+.. .. ++ ..- + ..+ .++|
T Consensus 156 ~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi-----~~-------~~-~~~----~----~~~-~~~d 213 (314)
T PRK12353 156 AGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPV-----IR-------EG-GGL----K----GVE-AVID 213 (314)
T ss_pred CCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCE-----EE-------eC-Cce----e----eee-EecC
Confidence 0 12221 699999999999999976321111 10 00 000 0 001 2599
Q ss_pred hhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHH--HcC
Q 004665 199 NDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAA--CAG 276 (738)
Q Consensus 199 ~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~--~~g 276 (738)
+|++|+++|.+|+||+|+|+|||||||++|| +|++++|++++.+++.+.+.. +.+.+|||.+|+++|..++ +.|
T Consensus 214 ~D~lAa~lA~~l~Ad~Li~lTdvdGVy~~~~-~~~a~~i~~i~~~e~~~~~~~---~~~~tGGM~~Kl~aA~~a~~~~~g 289 (314)
T PRK12353 214 KDFASAKLAELVDADLLIILTAVDKVYINFG-KPNQKKLDEVTVSEAEKYIEE---GQFAPGSMLPKVEAAISFVESRPG 289 (314)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCccccCCCC-CCCCeECcCcCHHHHHHHHhc---CCcCCCCcHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999765 688999999998887755542 3467899999999999998 568
Q ss_pred CcEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 277 IPVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 277 i~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
++|+|++ ++.+.+++.|+ .||++.
T Consensus 290 ~~v~I~~---~~~i~~~l~g~-~GT~i~ 313 (314)
T PRK12353 290 RKAIITS---LEKAKEALEGK-AGTVIV 313 (314)
T ss_pred CEEEECC---chHHHHHhCCC-CCeEec
Confidence 8999997 77888888888 899875
No 147
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.97 E-value=4.1e-30 Score=287.05 Aligned_cols=319 Identities=14% Similarity=0.083 Sum_probs=235.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHHHH---HHHHHHHHHhhchhhhHHHHhhccHHHHHHHH
Q 004665 315 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVE---NEADVAAAQEAGYAKSLVSRLALKPGKISSLA 391 (738)
Q Consensus 315 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~~~---~~~d~~~~~~~g~~~~~~~~~~~~~~~v~~~~ 391 (738)
-+++.++..+++++.|..-+...|...|+++...+..+.+.+.++ +..++.+. .+...+
T Consensus 25 ~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~------------------~l~~~l 86 (422)
T cd07080 25 PVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRE------------------NLERIL 86 (422)
T ss_pred CHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHH------------------HHHHHH
Confidence 357778888889999999999999999999999999988888776 33333111 111111
Q ss_pred HHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHH
Q 004665 392 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 470 (738)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~ 470 (738)
+. .+. ..+. +..+. +.+...+++++|+|||++|+|| +|.+.++++++||++||++|+|||+.+|.++.+|+
T Consensus 87 ~~--el~-~~~~----Ld~w~-~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~ 158 (422)
T cd07080 87 ER--ELG-SPGI----LDEWV-PPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALL 158 (422)
T ss_pred HH--hcC-Cccc----ccCCc-cCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence 11 010 0001 11111 1123456789999999999997 59878899999999999999999999999999999
Q ss_pred HHHHhhCCCccCc----CcEEEec--CC-ChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC-CcEEEecCCc-CeEEEc
Q 004665 471 KVITSAIPDTVGE----KLIGLVT--SR-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVD 541 (738)
Q Consensus 471 ~l~~~al~~alP~----gvv~vv~--~~-~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-~p~~lElGGk-~p~iV~ 541 (738)
+++.+ ++|+ +.++++. |+ +++++.|..++ |+|+||||+++|+.|++.+. .+.++|+||| +++|++
T Consensus 159 ~~l~~----~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 159 RSLAD----VDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHh----cCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEec
Confidence 99986 5888 8899984 53 44777777775 99999999999999998875 5689999999 556666
Q ss_pred CCC----CHHHHHHHHHHHccccCc-eecccceeEEeccc---cchHHHHHHHHHHHhcCceeecCC-cc----------
Q 004665 542 KSA----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL---ACNGALNELVVELQHEGVGLFGGP-RA---------- 602 (738)
Q Consensus 542 ~dA----Dld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i---~dd~f~~~l~~~~~~~~~~~~g~~-~~---------- 602 (738)
++| |++++++.+++++|.|+| .|+|++++|||+++ + ++|.++|.++++++....-... ..
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~-~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r 311 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEEL-REFAEALAAALERLPRRYPALSLSAAESAKIARAR 311 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchH-HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 668 999999999999999988 99999999999999 9 7999999999887632110000 00
Q ss_pred --------ccc-c-c----C--CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcce
Q 004665 603 --------SKL-L-Q----I--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 666 (738)
Q Consensus 603 --------~~~-~-p----v--~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~ 666 (738)
... . . | .+..-...-.++=.+.|.++++++|++..++. |=-|.++|..+.+. .++++++..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~ 388 (422)
T cd07080 312 LEAEFYELKGGVSRDLGWTVIISDEIGLEASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAA 388 (422)
T ss_pred HHHHHHHHhcCCCCCCCeEEEEeCCCCccCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHH
Confidence 000 0 0 1 11111111234447888999999999999985 77899999988887 777777764
Q ss_pred eEE
Q 004665 667 AAV 669 (738)
Q Consensus 667 G~V 669 (738)
-+|
T Consensus 389 ~Gv 391 (422)
T cd07080 389 AGV 391 (422)
T ss_pred cCc
Confidence 443
No 148
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=99.97 E-value=3.5e-30 Score=254.46 Aligned_cols=244 Identities=22% Similarity=0.340 Sum_probs=175.2
Q ss_pred EEEEECccceecCCC--cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHH
Q 004665 17 LVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (738)
Q Consensus 17 iVIKiGGs~l~~~~~--~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 94 (738)
+|+|||||+||+|+. +++++++.+++++|.. ..--++|||||| ++|||...+.+... +..+..... +-.
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGg-GSFGHp~Ak~~~~~--~~~~~~s~~----G~~ 73 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGG-GSFGHPAAKEFGLE--GLKNYLSPL----GFS 73 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecC-ccccCHHHHHhCcc--ccccccCcc----chH
Confidence 899999999999987 5899999999999985 112367899954 57999877776651 111110000 000
Q ss_pred HHHhhhHHHHHHHHHHhhcCCCceeEEEecCC-CCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccc
Q 004665 95 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS-DFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDT 173 (738)
Q Consensus 95 ~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~-d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~ 173 (738)
........+...+.+.|.+.|+.+....-.+. -+..+..+.. .+.|+.+|+.|++||++| |++..++
T Consensus 74 ~~~~am~~L~~~V~~~l~~~Gv~av~~~P~s~~~~~gr~~~~~-l~~i~~~l~~gfvPvl~G-DVv~d~~---------- 141 (252)
T COG1608 74 LTHLAMLELNSIVVDALLDAGVRAVSVVPISFSTFNGRILYTY-LEAIKDALEKGFVPVLYG-DVVPDDD---------- 141 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccCcceeecCCceeech-HHHHHHHHHcCCEeeeec-ceEEcCC----------
Confidence 00011122333455677778877643211110 1112222222 788999999999999998 7766531
Q ss_pred cccccccccccccccccCCCc-eecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhc
Q 004665 174 SLENYLKPFRSSFLCFYDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITF 251 (738)
Q Consensus 174 ~~~g~~~p~~~~~~~~~~~~g-~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~ 251 (738)
.| .++|+|.++.++|.+|++|+++|+|||||||+.||+ .|+.+.++++..... ..
T Consensus 142 -------------------~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~----~~ 198 (252)
T COG1608 142 -------------------NGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVA----LG 198 (252)
T ss_pred -------------------CceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhh----hc
Confidence 12 469999999999999999999999999999999994 777776666644311 13
Q ss_pred CCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 252 GDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 252 ~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
|+.+.|+||||..|++++....+++.+|+|+||..|++|..++.|+.+||.+.
T Consensus 199 gs~~~DVTGGi~~Kl~~~~~~~~~~~~vyi~ng~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 199 GSGGTDVTGGIAKKLEALLEIARYGKEVYIFNGNKPENIYRALRGENVGTRID 251 (252)
T ss_pred CcCcccchhhHHHHHHHHHHHHhcCceEEEECCCCHHHHHHHhcCCCCceEec
Confidence 44457999999999999999999999999999999999999999999999875
No 149
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=99.97 E-value=2.3e-29 Score=266.40 Aligned_cols=242 Identities=22% Similarity=0.314 Sum_probs=177.1
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccc---cCCcccccCcccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV---NSSLADLQKPQNE 89 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~---~~~~~~~~~~~~~ 89 (738)
+++++|||+||+++.+.. ....++++|+.|+..|.++|||||||+++... ++.+... ..+.+.++...++
T Consensus 22 ~~~~~VIk~gG~~~~~~~------l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~-~~~~g~~~~~~~G~rvT~~~~l~ 94 (284)
T CHL00202 22 RGRIMVIKYGGAAMKNLI------LKADIIKDILFLSCIGLKIVVVHGGGPEINFW-LKQLNISPKFWNGIRVTDKVTME 94 (284)
T ss_pred cCCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHH-HHHCCCCCEeECCcccCCHHHHH
Confidence 457999999999997754 24589999999999999999999999887653 4444332 2333434433333
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCC-----------CC--CcccccccHHHHHHHHHhCCceEEEeCC
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS-----------DF--RDEDFRKQLYDTVQSLLDLRVIPIFNEN 156 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~-----------d~--~~~~~~~~~~~~i~~lL~~g~iPVi~g~ 156 (738)
+..++++ |... ..+...|.+.|+++..+...+. ++ .......+ .+.|+.+|++|+|||+++
T Consensus 95 ~~~~~l~--g~ln--~~lv~~L~~~Gv~av~l~~~d~~~i~a~~~~~~d~~~~G~i~~v~-~~~i~~ll~~g~iPVi~~- 168 (284)
T CHL00202 95 IVEMVLA--GKVN--KDLVGSINANGGKAVGLCGKDANLIVARASDKKDLGLVGEIQQVD-PQLIDMLLEKNYIPVIAS- 168 (284)
T ss_pred HHHHHHh--hHHH--HHHHHHHHhCCCCeeeeeeccCCEEEEEeCCCcccccceeEEecC-HHHHHHHHHCCCEEEECC-
Confidence 3222222 2222 2345778888887766543221 21 22333455 899999999999999953
Q ss_pred CceeccCCCcccccccccccccccccccccccccCCCc-ee-cchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCc
Q 004665 157 DAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG-IF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNS 234 (738)
Q Consensus 157 ~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~~-i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a 234 (738)
+.. |..| .+ +|+|++|+.+|.+|+|++|+|+|||+|||+++ .+| +
T Consensus 169 --~~~-----------------------------~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~-~d~-~ 215 (284)
T CHL00202 169 --VAA-----------------------------DHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADI-NDP-N 215 (284)
T ss_pred --Ccc-----------------------------CCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCC-CCC-C
Confidence 121 1223 23 89999999999999999999999999999853 234 4
Q ss_pred cccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchhH-HHhhcCceeEEEEc
Q 004665 235 KLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 304 (738)
Q Consensus 235 ~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i-~~~~tg~~iGTvi~ 304 (738)
++|++++++|+.+.+. .++++|||.+|+++|..++++|++ |+|+||+.++.+ .++++++..||.+.
T Consensus 216 ~~i~~i~~~e~~~l~~----~g~~tGGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 216 SLISTLNIKEARNLAS----TGIISGGMIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred CccccccHHHHHHHHh----cCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 7999999988876553 247899999999999999999998 899999999975 67999988999874
No 150
>PLN02512 acetylglutamate kinase
Probab=99.96 E-value=7.6e-29 Score=265.12 Aligned_cols=242 Identities=23% Similarity=0.299 Sum_probs=176.6
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccc---cCCcccccCcccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV---NSSLADLQKPQNE 89 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~---~~~~~~~~~~~~~ 89 (738)
+++++||||||+++++++ ....++++|+.|...|.++|||||||+++.. .+..+... ..+.+.++...++
T Consensus 46 ~~~tiVIKlGGs~i~d~~------~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~-~~~~~gi~~~~~~G~rvT~~~~le 118 (309)
T PLN02512 46 RGKTVVVKYGGAAMKDPE------LKAGVIRDLVLLSCVGLRPVLVHGGGPEINS-WLKKVGIEPQFKNGLRVTDAETME 118 (309)
T ss_pred CCCeEEEEECCeeccChh------HHHHHHHHHHHHHHCCCCEEEEECCcHHHHH-HHHHcCCCCcCCCCCcCCCHHHHH
Confidence 568999999999998875 2457999999999999999999998886654 34333332 2233333332222
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCC------------CCCc--ccccccHHHHHHHHHhCCceEEEeC
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS------------DFRD--EDFRKQLYDTVQSLLDLRVIPIFNE 155 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~------------d~~~--~~~~~~~~~~i~~lL~~g~iPVi~g 155 (738)
...+++ .|. +...+...|++.|+++..+...+. ++.. .....+ .+.|+.+|+.|.|||+++
T Consensus 119 i~~~~l--~g~--ln~~lv~~L~~~Gv~av~l~g~d~~~i~a~~~~~~~~~~~~G~i~~v~-~~~i~~lL~~g~IPVi~~ 193 (309)
T PLN02512 119 VVEMVL--VGK--VNKSLVSLINKAGGTAVGLSGKDGRLLRARPSPNSADLGFVGEVTRVD-PTVLRPLVDDGHIPVIAT 193 (309)
T ss_pred HHHHHH--hhH--HHHHHHHHHHHcCCCeEEeehhhCCEEEEEEcCcCccccccceeeecC-HHHHHHHHhCCCEEEEeC
Confidence 222211 222 222356788899998766533221 2222 223344 899999999999999975
Q ss_pred CCceeccCCCcccccccccccccccccccccccccCCCc-ee-cchhhHHHHHHhhcCCCEEEeeccccccccCCcccCC
Q 004665 156 NDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG-IF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPN 233 (738)
Q Consensus 156 ~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~~-i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~ 233 (738)
. .. |..| .+ +|+|++|+++|.+|+|++|+|+|||+|||+++| ++
T Consensus 194 ~---~~-----------------------------d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~--~~ 239 (309)
T PLN02512 194 V---AA-----------------------------DEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKD--DP 239 (309)
T ss_pred c---eE-----------------------------CCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCC--CC
Confidence 1 11 1112 12 799999999999999999999999999998753 34
Q ss_pred ccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchhHH-HhhcCceeEEEEc
Q 004665 234 SKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSII-KVLEGKRVGTLFH 304 (738)
Q Consensus 234 a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i~-~~~tg~~iGTvi~ 304 (738)
+++|++++.+|+.+.+. ..+++|||.+|+++|..++++|++ |+|+||..|+.+. .+++++..||++.
T Consensus 240 ~~lI~~i~~~e~~~l~~----~~~vtGGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 240 GSLVKELDIKGVRKLIA----DGKIAGGMIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred cCCCcccCHHHHHHHHh----CCCCCCcHHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 78999999988876553 357899999999999999999997 9999999998875 5888888999875
No 151
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=1.6e-28 Score=259.17 Aligned_cols=239 Identities=22% Similarity=0.300 Sum_probs=168.8
Q ss_pred CCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHH--hcccccccCCcccccCccccch
Q 004665 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQR--LRYRKLVNSSLADLQKPQNELD 91 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~--l~~~~~~~~~~~~~~~~~~~l~ 91 (738)
++++|||+||+++.+.+ +..++++|+.|.+.|+++|||||||++++... ++....+..+.+.++...+++.
T Consensus 18 ~~~~VIKlGG~ai~~~~-------l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~~gi~~~~~~G~RvT~~~~l~~~ 90 (280)
T cd04237 18 GKTFVIAFGGEAVAHPN-------FDNIVHDIALLHSLGIRLVLVHGARPQIDQRLAERGLEPRYHRGLRITDAAALECV 90 (280)
T ss_pred CCEEEEEEChHHhcCch-------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCccccCCcCcCCHHHHHHH
Confidence 46999999999998754 78999999999999999999999999999742 2222222223343444334443
Q ss_pred HHHHHHhhhHH--HHHHHHHHhhcCCCceeEEEecCC--------------CC--CcccccccHHHHHHHHHhCCceEEE
Q 004665 92 GKACAAVGQSS--LMALYDTLFSQLDVTSSQLLVTDS--------------DF--RDEDFRKQLYDTVQSLLDLRVIPIF 153 (738)
Q Consensus 92 ~~~~~~~g~~~--~~~~~~~~l~~~gi~~~~~~~~~~--------------d~--~~~~~~~~~~~~i~~lL~~g~iPVi 153 (738)
.++ .|... +.+.+...+...|++...+...+. ++ .......+ .+.|+.+|++|+|||+
T Consensus 91 ~~~---~g~v~~~l~~~l~~~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~-~~~i~~lL~~g~ipv~ 166 (280)
T cd04237 91 KEA---AGAVRLEIEALLSMGLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRID-ADAIRRQLDQGSIVLL 166 (280)
T ss_pred HHH---HHHHHHHHHHHHHhhccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEc-HHHHHHHHHCCCEEEE
Confidence 333 23322 222222223233332212221111 11 12223345 8999999999999999
Q ss_pred eCCCceeccCCCcccccccccccccccccccccccccCCCce-e-cchhhHHHHHHhhcCCCEEEeeccccccccCCccc
Q 004665 154 NENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGI-F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSE 231 (738)
Q Consensus 154 ~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~-~-i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~ 231 (738)
. +. +. +.+|. + +|+|.+|..||.+|+|++|+|+|||||||++
T Consensus 167 ~------~~----g~----------------------~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~---- 210 (280)
T cd04237 167 S------PL----GY----------------------SPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDD---- 210 (280)
T ss_pred C------Cc----eE----------------------CCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCC----
Confidence 3 31 10 11222 3 8999999999999999999999999999975
Q ss_pred CCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchhHHH-hhcCceeEEEE
Q 004665 232 PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIK-VLEGKRVGTLF 303 (738)
Q Consensus 232 ~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i~~-~~tg~~iGTvi 303 (738)
++++|++++.+|+.+++..+. ..+|||++|+++|..++++|++ |||+|++.|+.+.. +++.+..||.+
T Consensus 211 -~~~~i~~i~~~e~~~l~~~~~---~~~ggM~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 211 -DGELIRELTAQEAEALLETGA---LLTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred -CCCccccCCHHHHHHHHHcCC---CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 278999999988887776432 2489999999999999999996 99999999998875 88888888864
No 152
>PRK00942 acetylglutamate kinase; Provisional
Probab=99.96 E-value=2.5e-28 Score=259.15 Aligned_cols=242 Identities=22% Similarity=0.289 Sum_probs=177.1
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccc---cCCcccccCcccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV---NSSLADLQKPQNE 89 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~---~~~~~~~~~~~~~ 89 (738)
+++++||||||+++++++ .+..++++|+.|.+.|.++|||||||+++... +...... ..+.+.++...++
T Consensus 22 ~~~~iViK~GGs~l~~~~------~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~-~~~~g~~~~~~~g~~~t~~~~l~ 94 (283)
T PRK00942 22 MGKTIVIKYGGNAMTDEE------LKEAFARDIVLLKQVGINPVVVHGGGPQIDEL-LKKLGIESEFVNGLRVTDAETME 94 (283)
T ss_pred cCCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCCEEEEeCChHHHHHH-HHHCCCCcEeeCCEecCCHHHHH
Confidence 356899999999998876 36789999999999999999999998876653 3322221 1122222222222
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCC------------CCC--cccccccHHHHHHHHHhCCceEEEeC
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS------------DFR--DEDFRKQLYDTVQSLLDLRVIPIFNE 155 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~------------d~~--~~~~~~~~~~~i~~lL~~g~iPVi~g 155 (738)
+..+ +..|+.. ..+...|+++|+++.++...+. |+. ......+ .+.|+.+|++|.|||+++
T Consensus 95 ~~~~--a~~G~l~--~~i~~~L~~~Gv~a~~l~~~~~~~~ta~~~~~~~~~~~~g~i~~i~-~~~l~~ll~~g~vpVv~~ 169 (283)
T PRK00942 95 VVEM--VLAGKVN--KELVSLINKHGGKAVGLSGKDGGLITAKKLEEDEDLGFVGEVTPVN-PALLEALLEAGYIPVISP 169 (283)
T ss_pred HHHH--HHcCchH--HHHHHHHHhCCCCccceeeccCCEEEEEECCCCCCCccccceEEEC-HHHHHHHHHCCCEEEEcC
Confidence 2211 1114332 3456888899988766543221 111 2234456 899999999999999953
Q ss_pred CCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCcc
Q 004665 156 NDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSK 235 (738)
Q Consensus 156 ~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~ 235 (738)
+..+ ..| +..++|+|++|+.+|.+|+|++|+|+|||+|||+++ ++
T Consensus 170 ---~~~~------------~~g---------------~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~~-----~~ 214 (283)
T PRK00942 170 ---IGVG------------EDG---------------ETYNINADTAAGAIAAALGAEKLILLTDVPGVLDDK-----GQ 214 (283)
T ss_pred ---cEEC------------CCC---------------cEEEECHHHHHHHHHHHcCCCEEEEEECCcccccCC-----Cc
Confidence 1210 011 112499999999999999999999999999999873 78
Q ss_pred ccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchh-HHHhhcCceeEEEEcc
Q 004665 236 LIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDS-IIKVLEGKRVGTLFHR 305 (738)
Q Consensus 236 ~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~-i~~~~tg~~iGTvi~~ 305 (738)
+|++++++|+.+.+. ..+++|||.+|+++|..++++|++ |+|+||+.++. +.++++++..||++.+
T Consensus 215 ~i~~i~~~e~~~~~~----~~~~tggm~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 282 (283)
T PRK00942 215 LISELTASEAEELIE----DGVITGGMIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVP 282 (283)
T ss_pred ccccCCHHHHHHHHH----cCCCCCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEec
Confidence 999999998876543 247899999999999999999985 99999999999 7789999999999875
No 153
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A
Probab=99.96 E-value=5.6e-28 Score=255.90 Aligned_cols=241 Identities=22% Similarity=0.311 Sum_probs=174.1
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc---CCcccccCcccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN---SSLADLQKPQNE 89 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~---~~~~~~~~~~~~ 89 (738)
+++++||||||+++++++ .+..++++|+.|.+.|.++|||||||+++... +..+.... .+.+.++...++
T Consensus 13 ~~~~~ViKlGGs~i~~~~------~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~-l~~~g~~~~~~~g~r~t~~~~~~ 85 (279)
T cd04250 13 RGKTVVIKYGGNAMKDEE------LKESFARDIVLLKYVGINPVVVHGGGPEINEM-LKKLGIESEFVNGLRVTDEETME 85 (279)
T ss_pred cCCEEEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHH-HHHCCCCCEeECCeecCCHHHHH
Confidence 357999999999998875 35689999999988899999999998866543 33333221 122222222222
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCC-----------------CC--CcccccccHHHHHHHHHhCCce
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS-----------------DF--RDEDFRKQLYDTVQSLLDLRVI 150 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~-----------------d~--~~~~~~~~~~~~i~~lL~~g~i 150 (738)
+..++++ |. +...+...|++.|+++..+...+. +| .......+ .+.|+.+|+.|.|
T Consensus 86 ~~~~~~~--g~--ln~~l~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~-~~~i~~ll~~g~I 160 (279)
T cd04250 86 IVEMVLV--GK--VNKEIVSLINRAGGKAVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVN-PELLETLLEAGYI 160 (279)
T ss_pred HHHHHHc--Cc--hHHHHHHHHHHcCCCcceeecCCCCEEEEEECcccccCCCcccCcccceEEEc-HHHHHHHHHCCCe
Confidence 2211111 43 233456888888888766532221 11 11223344 8999999999999
Q ss_pred EEEeCCCceeccCCCcccccccccccccccccccccccccCCCc-e-ecchhhHHHHHHhhcCCCEEEeeccccccccCC
Q 004665 151 PIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG-I-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGP 228 (738)
Q Consensus 151 PVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~-~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~d 228 (738)
||+++ +.. ++.| . .+|+|++|+++|.+|+|++|+|+|||+|||++|
T Consensus 161 PVi~~---~~~-----------------------------~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~ 208 (279)
T cd04250 161 PVIAP---VGV-----------------------------GEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDP 208 (279)
T ss_pred EEEcC---Ccc-----------------------------CCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCC
Confidence 99964 121 1112 2 389999999999999999999999999999998
Q ss_pred cccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchhH-HHhhcCceeEEEE
Q 004665 229 PSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 303 (738)
Q Consensus 229 P~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i-~~~~tg~~iGTvi 303 (738)
|+ ++++|++++.+|+.+.+. ..+++|||.+|+++|..++++|++ |+|+||+.|+.+ .++++++..||++
T Consensus 209 p~--~~~~i~~i~~~e~~~l~~----~~~~tGgm~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 209 ND--PGSLISEISLKEAEELIA----DGIISGGMIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred CC--CccccccCCHHHHHHHHH----cCCCCCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 83 378999999998875543 247899999999999999999997 999999999975 6688888889864
No 154
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=99.96 E-value=6.8e-28 Score=253.55 Aligned_cols=234 Identities=26% Similarity=0.319 Sum_probs=167.2
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc---C---C--cccccCcc
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN---S---S--LADLQKPQ 87 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~---~---~--~~~~~~~~ 87 (738)
++||||||+++.++ ..++++|+.+.+.|.++|||||||+++.. .+..+.... . + .+.++..+
T Consensus 1 ~~ViK~GG~~l~~~---------~~~~~~i~~l~~~g~~~VlVHGgg~~i~~-~~~~~gi~~~~~~~~~g~~~rvt~~~~ 70 (268)
T PRK14058 1 MIVVKIGGSVGIDP---------EDALIDVASLWADGERVVLVHGGSDEVNE-LLERLGIEPRFVTSPSGVTSRYTDRET 70 (268)
T ss_pred CEEEEEChHHhhCc---------HHHHHHHHHHHHCCCCEEEEeCCHHHHHH-HHHHcCCCceEEeCCCCCceEeCCHHH
Confidence 58999999999875 35799999999999999999998887665 344443321 1 1 12222222
Q ss_pred ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEE------ec------------------CCCCCcccccccHHHHHHH
Q 004665 88 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VT------------------DSDFRDEDFRKQLYDTVQS 143 (738)
Q Consensus 88 ~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~------~~------------------~~d~~~~~~~~~~~~~i~~ 143 (738)
+.. ...++++ +...+...|++.|+++..+. ++ +..|.......+ .+.|+.
T Consensus 71 l~~---~~~a~~~--ln~~lv~~L~~~Gv~a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~-~~~i~~ 144 (268)
T PRK14058 71 LEV---FIMAMAL--INKQLVERLQSLGVNAVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVN-TDLLKL 144 (268)
T ss_pred HHH---HHHHHHH--HHHHHHHHHHhCCCCccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEEC-HHHHHH
Confidence 221 1223332 22234467887887654431 11 111222333445 899999
Q ss_pred HHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccc
Q 004665 144 LLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 223 (738)
Q Consensus 144 lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~G 223 (738)
+|++|.|||+++ ..+.. .| +..++|+|++|+++|.+|+|++|+|+|||+|
T Consensus 145 ll~~g~iPVi~~-~~~~~--------------~g---------------~~~~i~~D~~A~~lA~~l~A~~li~ltdv~G 194 (268)
T PRK14058 145 LLKAGYLPVVAP-PALSE--------------EG---------------EPLNVDGDRAAAAIAGALKAEALVLLSDVPG 194 (268)
T ss_pred HHHCCCEEEEeC-ceECC--------------CC---------------cEEecCHHHHHHHHHHHcCCCEEEEEeCChh
Confidence 999999999975 11110 11 1124899999999999999999999999999
Q ss_pred cccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCC-cEEEEeCccchhHHHhhcCceeEEE
Q 004665 224 LYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTL 302 (738)
Q Consensus 224 V~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi-~v~I~~g~~~~~i~~~~tg~~iGTv 302 (738)
||++||+ ++++|++++.+|+.+.+ .+++|||.+|+++|..+.++|+ +++|+||+.|+.+...++|. ||+
T Consensus 195 v~~~~p~--~~~~i~~i~~~e~~~l~------~~~tGgM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l~G~--GT~ 264 (268)
T PRK14058 195 LLRDPPD--EGSLIERITPEEAEELS------KAAGGGMKKKVLMAAEAVEGGVGRVIIADANVDDPISAALAGE--GTV 264 (268)
T ss_pred hccCCCC--CCcCccCcCHHHHHHHh------hccCCccHHHHHHHHHHHHcCCCEEEEEcCCCcchHHHHhCCC--ceE
Confidence 9999883 46799999988877543 2579999999999999999999 59999999999999988775 998
Q ss_pred Ecc
Q 004665 303 FHR 305 (738)
Q Consensus 303 i~~ 305 (738)
+..
T Consensus 265 I~~ 267 (268)
T PRK14058 265 IVN 267 (268)
T ss_pred Eec
Confidence 863
No 155
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=99.95 E-value=3.4e-28 Score=253.53 Aligned_cols=238 Identities=27% Similarity=0.317 Sum_probs=178.6
Q ss_pred EEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCC--cccccCccccchHHHH
Q 004665 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS--LADLQKPQNELDGKAC 95 (738)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~--~~~~~~~~~~l~~~~~ 95 (738)
||||||++++++ +.+.+++++|+.+.+.|+++|||||||++++....+ +...... ...+.. .....+
T Consensus 1 ViKiGGs~l~~~------~~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~ 69 (248)
T cd02115 1 VIKFGGSSVSSE------ERLRNLARILVKLASEGGRVVVVHGAGPQITDELLA-HGELLGYARGLRITD----RETDAL 69 (248)
T ss_pred CEeeCccccCCH------HHHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHH-HHHhhhhhhccCCCH----HHHHHH
Confidence 799999999874 358999999999998899999999999988765332 2211000 001111 112345
Q ss_pred HHhhhHHHHHHHHHHhhcCCCceeEEEecC-----CCCC--cccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccc
Q 004665 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTD-----SDFR--DEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 96 ~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~-----~d~~--~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~ 168 (738)
.+.++..+..++...|.++|+++.++...+ .++. ......+ .+.|+.+|+.|.|||++|+......
T Consensus 70 ~~~~~~~~~~~~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~g~~~~~~-~~~l~~~l~~~~ipVv~g~~~~~~~------ 142 (248)
T cd02115 70 AAMGEGMSNLLIAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVS-TDRLKSLLENGILPILSGFGGTDEK------ 142 (248)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEchHHcCeEeCCCCCcccceeeC-HHHHHHHHhCCcEEEecCeEeccCC------
Confidence 566666666678899999999987764332 2221 1222334 7889999999999999874332210
Q ss_pred ccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHH
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQA 247 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~ 247 (738)
..+ . ...+++|++|+.+|.+|+|++|+|+|||+|||++||+ +|++++|++|+++|+.+
T Consensus 143 ------~~~--------------~-~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~ 201 (248)
T cd02115 143 ------ETG--------------T-LGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAE 201 (248)
T ss_pred ------cee--------------e-ecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHH
Confidence 000 0 0139999999999999999999999999999999995 88999999999988875
Q ss_pred HHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 248 EITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 248 ~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
... .|+|..|++++..+.++|++++|+|++.++.+ ++++++..||++
T Consensus 202 l~~--------~g~~~~k~~a~~~~~~~~~~v~I~~~~~~~~l-~~~~~~~~GT~I 248 (248)
T cd02115 202 LAY--------AGAMVLKPKAADPAARAGIPVRIANTENPGAL-ALFTPDGGGTLI 248 (248)
T ss_pred HHH--------cCCCccCHHHHHHHHHcCCcEEEEeCCCcccc-cccCCCCCCCCC
Confidence 433 47799999999999999999999999999999 988888889864
No 156
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=99.95 E-value=2e-27 Score=244.72 Aligned_cols=227 Identities=20% Similarity=0.251 Sum_probs=169.5
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHHH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (738)
++|||||||++++++++++.+.+..++++|+++.+.|++++||||||..+++.....+... ....+. ..+.
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~~~~---~~~~~~------~~~~ 71 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAARGMP---RATADY------IGML 71 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHhhcCCC---hhhHHH------HHHH
Confidence 5899999999999877899999999999999999999999999988765565322111111 011111 1122
Q ss_pred HHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccc
Q 004665 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSL 175 (738)
Q Consensus 96 ~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~ 175 (738)
....+.. ++...|.++|+++.++... ++.......+ .+.+..+|+.|.|||++|..
T Consensus 72 ~~~l~~~---l~~~~l~~~Gi~a~~~~~~--~~~~~~~~~~-~~~l~~~l~~g~ipVi~g~~------------------ 127 (229)
T cd04239 72 ATVMNAL---ALQDALEKLGVKTRVMSAI--PMQGVAEPYI-RRRAIRHLEKGRIVIFGGGT------------------ 127 (229)
T ss_pred HHHHHHH---HHHHHHHHcCCCEEEeCHH--HHhhhhcccc-HHHHHHHHhCCCEEEEeCcc------------------
Confidence 2333333 3468888899988764221 1111111234 66799999999999997621
Q ss_pred cccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCC
Q 004665 176 ENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDK 254 (738)
Q Consensus 176 ~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~ 254 (738)
| . .+.++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++++++|+.+. .
T Consensus 128 -g--~--------------~~~~sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~-~---- 185 (229)
T cd04239 128 -G--N--------------PGFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKK-G---- 185 (229)
T ss_pred -C--C--------------CCCCcHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHH-h----
Confidence 1 0 137899999999999999999999999999999995 899999999999877632 2
Q ss_pred CccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 255 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 255 ~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
.|..|+.++..+.++|++++|+||+.|+.+.++++|+..||.+
T Consensus 186 ------~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~g~~~GT~i 228 (229)
T cd04239 186 ------LKVMDATALTLCRRNKIPIIVFNGLKPGNLLRALKGEHVGTLI 228 (229)
T ss_pred ------cCCccHHHHHHHHHCCCeEEEECCCChhHHHHHHcCCCCCeEe
Confidence 1445677888889999999999999999999999988889976
No 157
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.95 E-value=1.5e-27 Score=268.72 Aligned_cols=242 Identities=18% Similarity=0.254 Sum_probs=175.0
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHH--hcccccccCCcccccCccccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQR--LRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~--l~~~~~~~~~~~~~~~~~~~l 90 (738)
+++++|||+||++|.+++ +..++++|+.|...|.++|||||||++++... ++....+..+.+.++...+++
T Consensus 24 ~~~~~VIk~GG~~l~~~~-------~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~G~RvT~~~~l~~ 96 (441)
T PRK05279 24 RGKTFVIMLGGEAIAHGN-------FSNIVHDIALLHSLGIRLVLVHGARPQIEEQLAARGIEPRYHKGLRVTDAAALEC 96 (441)
T ss_pred CCCEEEEEECchhccChh-------HHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHcCCCceecCCcccCCHHHHHH
Confidence 346899999999998765 67999999999999999999999999999742 333333333444455545555
Q ss_pred hHHHHHHhhhHHHHHHHHHHhhcCCCceeE-----EEecCC--------------CCC--cccccccHHHHHHHHHhCCc
Q 004665 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTDS--------------DFR--DEDFRKQLYDTVQSLLDLRV 149 (738)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~-----~~~~~~--------------d~~--~~~~~~~~~~~i~~lL~~g~ 149 (738)
..++. |+... .+...|++ |+++.. +...++ |+. +.....+ .+.|+.+|++|+
T Consensus 97 ~~~~~---g~v~~--~l~~~l~~-g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~-~~~i~~ll~~g~ 169 (441)
T PRK05279 97 VKQAA---GELRL--DIEARLSM-GLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRID-AEAIRRQLDSGA 169 (441)
T ss_pred HHHHH---HHHHH--HHHHHHhc-cCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEEe-HHHHHHHHHCCC
Confidence 54432 33222 23445533 444322 221111 221 2223345 899999999999
Q ss_pred eEEEeCCCceeccCCCcccccccccccccccccccccccccCCCc-e-ecchhhHHHHHHhhcCCCEEEeeccccccccC
Q 004665 150 IPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG-I-FWDNDSLAGLLALELKADLLVLLSDVEGLYSG 227 (738)
Q Consensus 150 iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~-~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~ 227 (738)
|||+.. +.. |..| . .+|+|.+|+.||.+|+|++|+|+|||+|||++
T Consensus 170 ipV~~~---i~~-----------------------------~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~ 217 (441)
T PRK05279 170 IVLLSP---LGY-----------------------------SPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDE 217 (441)
T ss_pred eEEECC---ceE-----------------------------CCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCC
Confidence 999931 111 1122 2 39999999999999999999999999999964
Q ss_pred CcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchhHHH-hhcCceeEEEEcc
Q 004665 228 PPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIK-VLEGKRVGTLFHR 305 (738)
Q Consensus 228 dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i~~-~~tg~~iGTvi~~ 305 (738)
++++|++++.+++.+.+.. ....+++|||++|+++|..++++|++ |+|++|..|+.+.. +++.+..||.+..
T Consensus 218 -----~~~~i~~i~~~~~~~~~~~-~~~~~~~ggM~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~ 291 (441)
T PRK05279 218 -----DGELIRELSPNEAQALLEA-LEDGDYNSGTARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVM 291 (441)
T ss_pred -----CCchhhhCCHHHHHHHHhh-hhcCCCCccHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEec
Confidence 3789999999998765541 11346799999999999999999996 99999999999886 5666679999987
Q ss_pred C
Q 004665 306 D 306 (738)
Q Consensus 306 ~ 306 (738)
+
T Consensus 292 ~ 292 (441)
T PRK05279 292 E 292 (441)
T ss_pred C
Confidence 6
No 158
>PRK14558 pyrH uridylate kinase; Provisional
Probab=99.95 E-value=4.3e-27 Score=242.47 Aligned_cols=222 Identities=23% Similarity=0.354 Sum_probs=167.5
Q ss_pred CeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChh-hhhHHHhcccccccCCcccccCccccchH
Q 004665 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAV-GVGRQRLRYRKLVNSSLADLQKPQNELDG 92 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~-~~g~~~l~~~~~~~~~~~~~~~~~~~l~~ 92 (738)
+++|||+|||+|++++. +++.+.+..++++|+++.+.|++++||||||. ..|+...+ ++..
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs~~~g~~~~~-----------~~~~------ 63 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGNLFRGVELKE-----------LSPT------ 63 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccHHHHHHhccC-----------CChH------
Confidence 47999999999998854 69999999999999999999999999997654 22332111 1100
Q ss_pred HHHHHhhhH-HHH--HHHHHHhhcCCCceeEEE--ecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcc
Q 004665 93 KACAAVGQS-SLM--ALYDTLFSQLDVTSSQLL--VTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (738)
Q Consensus 93 ~~~~~~g~~-~~~--~~~~~~l~~~gi~~~~~~--~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~ 167 (738)
....+|+. .++ .++...|.++|+++..+. ....++. ..+ .+.++.+|+.|.|||++|+..
T Consensus 64 -~~d~ig~~~~~ln~~~~~~~l~~~gi~a~~~~~~~~~~~~~----~~~-~~~i~~ll~~g~vpV~~G~~~--------- 128 (231)
T PRK14558 64 -RADQIGMLGTVINALYLKDIFEKSGLKAVIVSQIVNLPSVE----PIN-YDDIELYFRAGYIVIFAGGTS--------- 128 (231)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEeccccccchhh----hhh-HHHHHHHHHCCCEEEEECCCC---------
Confidence 11122331 112 236899999999864321 1112221 122 678899999999999987410
Q ss_pred cccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchH
Q 004665 168 VTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQ 246 (738)
Q Consensus 168 ~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~ 246 (738)
. .++++|++|+++|.+|+|+.|+++|||||||++||+ +|++++|++++++|+.
T Consensus 129 ------------~--------------~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~ 182 (231)
T PRK14558 129 ------------N--------------PFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAI 182 (231)
T ss_pred ------------C--------------CCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHH
Confidence 0 147899999999999999999999999999999995 8999999999988776
Q ss_pred HHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEcc
Q 004665 247 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 305 (738)
Q Consensus 247 ~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~ 305 (738)
+. + ...| +.+++..|.++|++|+|+||..|+.+.+++.|+..||++.+
T Consensus 183 ~~---g------~~~~--d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 230 (231)
T PRK14558 183 KM---G------LKVM--DTEAFSICKKYGITILVINFFEPGNLLKALKGENVGTLVVP 230 (231)
T ss_pred Hc---C------cccc--cHHHHHHHHHCCCCEEEEeCCCCCHHHHHHCCCCCcEEeCC
Confidence 32 1 1223 56788888899999999999999999999999989999865
No 159
>PRK12686 carbamate kinase; Reviewed
Probab=99.95 E-value=5e-27 Score=247.24 Aligned_cols=255 Identities=20% Similarity=0.270 Sum_probs=172.5
Q ss_pred cCCeEEEEECccceecCCC--cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccc
Q 004665 13 DVKRLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~--~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l 90 (738)
+++++|||+||++|.+.+. +.+.+++...+++|+.|.+.|+++||+||+|||+|...++...... . .++. +.|
T Consensus 1 ~~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~~~-~--~~~~--~pl 75 (312)
T PRK12686 1 MKEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAESNS-N--KVPA--MPL 75 (312)
T ss_pred CCCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhccc-c--CCCC--CCh
Confidence 3579999999999987553 3567789999999999999999999999999999965443222111 0 0111 111
Q ss_pred hHHHHHHhhhHHH--HHHHHHHhhcCCCc------eeEEEecCCC--CCc------------------------------
Q 004665 91 DGKACAAVGQSSL--MALYDTLFSQLDVT------SSQLLVTDSD--FRD------------------------------ 130 (738)
Q Consensus 91 ~~~~~~~~g~~~~--~~~~~~~l~~~gi~------~~~~~~~~~d--~~~------------------------------ 130 (738)
..-.+.+-|..+. ...+.+.|...++. ..|+++...| |.+
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~~~d~~ 155 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNNELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTFKEDAG 155 (312)
T ss_pred hhhhhhccchhhHHHHHHHHHHHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcccccCC
Confidence 1112223333332 22345566555532 1222222111 110
Q ss_pred cc-----------ccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCc-eecc
Q 004665 131 ED-----------FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG-IFWD 198 (738)
Q Consensus 131 ~~-----------~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~~i~ 198 (738)
++ ...+ .+.|+.||++|+|||.+|+..+.- .. + .+. -| +. .++|
T Consensus 156 ~G~rrvV~sP~P~~ive-~~~I~~Ll~~G~IpI~~GgggIPV-----v~--~----~~~--~~----------gv~avid 211 (312)
T PRK12686 156 RGYRRVVPSPKPQEIIE-HDTIRTLVDGGNIVIACGGGGIPV-----IR--D----DNT--LK----------GVEAVID 211 (312)
T ss_pred CCeEEeeCCCCCccccC-HHHHHHHHHCCCEEEEeCCCCCCe-----Ee--c----CCc--EE----------eeecccC
Confidence 01 0123 889999999999999876422111 00 0 000 00 01 1589
Q ss_pred hhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHc--C
Q 004665 199 NDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA--G 276 (738)
Q Consensus 199 ~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~--g 276 (738)
+|.+|++||.+|+||+|+|+|||+|||++ |++|++++|++++.+|+.+++.. ..+.+|||.+|+++|..++++ |
T Consensus 212 ~D~~Aa~LA~~L~Ad~LIiLTDVdGVy~~-~~~p~ak~I~~I~~~e~~~li~~---g~~~tGGM~pKveAA~~av~~g~g 287 (312)
T PRK12686 212 KDFASEKLAEQIDADLLIILTGVENVFIN-FNKPNQQKLDDITVAEAKQYIAE---GQFAPGSMLPKVEAAIDFVESGEG 287 (312)
T ss_pred ccHHHHHHHHHcCCCEEEEEeCchhhccC-CCCCCCeECCccCHHHHHHHhhC---CCccCCCcHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999995 56788999999999998876653 346789999999999999986 4
Q ss_pred CcEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 277 IPVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 277 i~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
.+++|++ ++.+.+++.|+ .||++.
T Consensus 288 ~~viI~~---~~~i~~aL~G~-~GT~I~ 311 (312)
T PRK12686 288 KKAIITS---LEQAKEALAGN-AGTHIT 311 (312)
T ss_pred CEEEEeC---chHHHHHhCCC-CCeEEe
Confidence 5688887 67778888887 799874
No 160
>PRK12352 putative carbamate kinase; Reviewed
Probab=99.95 E-value=8.5e-27 Score=247.28 Aligned_cols=257 Identities=18% Similarity=0.215 Sum_probs=174.4
Q ss_pred CCeEEEEECccceecCCC--cc--cHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc--CCcccccCcc
Q 004665 14 VKRLVVKVGTAVVTRSDG--RL--ALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN--SSLADLQKPQ 87 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~--~~--~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~--~~~~~~~~~~ 87 (738)
.|++|||+||+++.++.. +. +.+++..++++|+.|...|+++||||||||+++....+ ..... .+.+.++..
T Consensus 2 ~k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~-~~~~~~~~g~rvt~~~- 79 (316)
T PRK12352 2 KELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRR-AEIAHEREGLPLTPLA- 79 (316)
T ss_pred CcEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH-cCcccccCCCCCCCHH-
Confidence 479999999999976443 22 34689999999999999999999999999999985333 22211 011212221
Q ss_pred ccchHHHHHHhhhHHHHHHHHHHhhcCCCce-----eEEEec--CCCCC-------------------------------
Q 004665 88 NELDGKACAAVGQSSLMALYDTLFSQLDVTS-----SQLLVT--DSDFR------------------------------- 129 (738)
Q Consensus 88 ~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~-----~~~~~~--~~d~~------------------------------- 129 (738)
++..+....++. .+...+.+.|.+.|... .|+.++ +++|.
T Consensus 80 -~~v~~~~g~i~~-~i~~~L~~~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d~ 157 (316)
T PRK12352 80 -NCVADTQGGIGY-LIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVEDA 157 (316)
T ss_pred -HHHHHHHHHHHH-HHHHHHHHHHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeecC
Confidence 121111111111 22233556777666221 122222 12231
Q ss_pred cc-----------cccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCcee-c
Q 004665 130 DE-----------DFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIF-W 197 (738)
Q Consensus 130 ~~-----------~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~-i 197 (738)
.+ .+.++ .+.|+.||++|+|||..|++.|.- + .|.+|. .| +..+ +
T Consensus 158 g~G~rrvv~sp~pv~~V~-~~~I~~ll~~g~iVi~~ggggiPv-----~-----~~~~g~--~~----------n~~~nI 214 (316)
T PRK12352 158 GRGYRRVVASPEPKRIVE-APAIKALIQQGFVVIGAGGGGIPV-----V-----RTDAGD--YQ----------SVDAVI 214 (316)
T ss_pred CCCeEEecCCCCCceEEc-HHHHHHHHHCCCEEEecCCCCCCE-----E-----eCCCCC--cc----------Cceeee
Confidence 11 22345 899999999999977754332221 1 122221 11 1123 9
Q ss_pred chhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCC
Q 004665 198 DNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI 277 (738)
Q Consensus 198 ~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi 277 (738)
|+|.+|+.+|.+|+||+|+|+|||+|||.+++ +|++++|++++.+|+.+++..| ....|||+||+++|..++++|+
T Consensus 215 naD~aAa~iA~aL~AdkLI~LTDV~GV~~d~~-~~~~~li~~lt~~e~~~li~~g---~i~~GgM~pKl~aA~~al~~Gv 290 (316)
T PRK12352 215 DKDLSTALLAREIHADILVITTGVEKVCIHFG-KPQQQALDRVDIATMTRYMQEG---HFPPGSMLPKIIASLTFLEQGG 290 (316)
T ss_pred cHHHHHHHHHHHhCCCEEEEEeCchhhccCCC-CCCcccccccCHHHHHHHHhcC---CcCCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999998764 5677899999999988776533 2336999999999999999998
Q ss_pred c-EEEEeCccchhHHHhhcCceeEEEEcc
Q 004665 278 P-VVITSGFAMDSIIKVLEGKRVGTLFHR 305 (738)
Q Consensus 278 ~-v~I~~g~~~~~i~~~~tg~~iGTvi~~ 305 (738)
. |||++ ++.+.++++|+ .||.+..
T Consensus 291 ~~v~I~~---~~~i~~al~g~-~GT~I~~ 315 (316)
T PRK12352 291 KEVIITT---PECLPAALRGE-TGTHIIK 315 (316)
T ss_pred CeEEEcc---hHHHHHHHcCC-CCeEEEe
Confidence 7 99997 78889999988 8898753
No 161
>PRK00358 pyrH uridylate kinase; Provisional
Probab=99.95 E-value=5.8e-27 Score=241.69 Aligned_cols=228 Identities=20% Similarity=0.263 Sum_probs=164.8
Q ss_pred CeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHH
Q 004665 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (738)
+++|||||||+++++.. +++.+.+.+++++|+++.+.|+++|||||||. +.+.......... . ..++. ..
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~-~a~~~~~~~~~~~-~-~~~~~------~~ 71 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGN-IFRGYIGAAAGMD-R-ATADY------MG 71 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHhhcCCC-h-hhHHH------HH
Confidence 47999999999987542 57899999999999999999999999999864 3442211001100 0 01111 11
Q ss_pred HHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccc
Q 004665 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDT 173 (738)
Q Consensus 94 ~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~ 173 (738)
+....++.. ++...|..+|+++. ++.. ..+........ .+.+..+|++|.|||+++. .
T Consensus 72 ~~~~~l~~~---ll~~~l~~~Gi~a~-~~~~-~~~~~~~~~~~-~~~~~~~l~~g~vPVv~g~----~------------ 129 (231)
T PRK00358 72 MLATVMNAL---ALQDALERAGVDTR-VQSA-IPMPQVAEPYI-RRRAIRHLEKGRVVIFAAG----T------------ 129 (231)
T ss_pred HHHHHHHHH---HHHHHHHHcCCCeE-Eech-hhcccccCccc-HHHHHHHHHCCCEEEEECC----C------------
Confidence 223333332 45689999999875 2221 11111111112 4567899999999999541 0
Q ss_pred cccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcC
Q 004665 174 SLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFG 252 (738)
Q Consensus 174 ~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~ 252 (738)
++ .+.++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.+.
T Consensus 130 -----~~--------------~~~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~---- 186 (231)
T PRK00358 130 -----GN--------------PFFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK---- 186 (231)
T ss_pred -----CC--------------CCCCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc----
Confidence 01 137899999999999999999999999999999995 899999999998875421
Q ss_pred CCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 253 DKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 253 ~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
|....|++++..|.++|++++|+||+.|+.+.++++|+..||++
T Consensus 187 -------g~~~~d~~a~~~a~~~~i~v~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T PRK00358 187 -------GLKVMDATAISLARDNKIPIIVFNMNKPGNLKRVVKGEHIGTLV 230 (231)
T ss_pred -------CCcchhHHHHHHHHHcCCcEEEECCCCchHHHHHHCCCCCCEEe
Confidence 22234888999999999999999999999999999998889986
No 162
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.95 E-value=9e-27 Score=261.24 Aligned_cols=242 Identities=19% Similarity=0.205 Sum_probs=172.0
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHH--hcccccccCCcccccCccccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQR--LRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~--l~~~~~~~~~~~~~~~~~~~l 90 (738)
+++++|||+||+++++++ +.+++++|+.|...|.++|||||||++++... ++....+..+.+.++...+++
T Consensus 16 ~~~~~ViK~GG~~~~~~~-------~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~~~g~~~~~~~G~RvT~~~~l~~ 88 (429)
T TIGR01890 16 RGKTFVVGLGGELVEGGN-------LGNIVADIALLHSLGVRLVLVHGARPQIERILAARGRTPHYHRGLRVTDEASLEQ 88 (429)
T ss_pred CCCEEEEEEChhhccCcc-------HHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHHHcCCCceeeCCcccCCHHHHHH
Confidence 467999999999998765 67899999999999999999999999999742 333333334455555555555
Q ss_pred hHHHHHHhhhHHHHHHHHHHhhcCCC-----ceeE--EEec------C-CC--CCcccccccHHHHHHHHHhCCceEEEe
Q 004665 91 DGKACAAVGQSSLMALYDTLFSQLDV-----TSSQ--LLVT------D-SD--FRDEDFRKQLYDTVQSLLDLRVIPIFN 154 (738)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~l~~~gi-----~~~~--~~~~------~-~d--~~~~~~~~~~~~~i~~lL~~g~iPVi~ 154 (738)
..++ +..-+..+.+.+.......++ .... ++.. + .| +.......| .+.|+.+|++|+|||+
T Consensus 89 ~~~~-~g~vn~~l~~~l~~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~-~~~l~~ll~~g~ipvi- 165 (429)
T TIGR01890 89 AQQA-AGTLRLAIEARLSMSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKID-TEGIRRQLDAGSIVLL- 165 (429)
T ss_pred HHHH-hChHHHHHHHHHHhcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEc-HHHHHHHHHCCCeEEE-
Confidence 5432 211122232222222222221 1111 1110 0 12 223334556 8999999999999999
Q ss_pred CCCceeccCCCcccccccccccccccccccccccccCCCc-ee-cchhhHHHHHHhhcCCCEEEeeccccccccCCcccC
Q 004665 155 ENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG-IF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEP 232 (738)
Q Consensus 155 g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~~-i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~ 232 (738)
+|. ++ |.+| .+ +|+|++|+.||.+|+|++|+|+|||+|||+++
T Consensus 166 -----~pi----~~----------------------~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~---- 210 (429)
T TIGR01890 166 -----SPL----GH----------------------SPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPD---- 210 (429)
T ss_pred -----CCc----cc----------------------CCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCC----
Confidence 442 11 1222 23 99999999999999999999999999999752
Q ss_pred CccccceeeccchHHHHhcCCCCccccCc-hHHHHHHHHHHHHcCCc-EEEEeCccchhHHH-hhcCceeEEEEccC
Q 004665 233 NSKLIHTYIRAKHQAEITFGDKSRVGRGG-MTAKVNAAYCAACAGIP-VVITSGFAMDSIIK-VLEGKRVGTLFHRD 306 (738)
Q Consensus 233 ~a~~i~~i~~~e~~~~i~~~~~~~~~~gg-M~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i~~-~~tg~~iGTvi~~~ 306 (738)
+++|++|+.+|+.+.+.. +.|| |++|+++|..|++.|++ |+|+||+.|+.+.. +++.+..||.+..+
T Consensus 211 -g~~i~~i~~~~~~~l~~~------~~~~~~~~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d 280 (429)
T TIGR01890 211 -GTLAAELSPQEVESLAER------LGSETTRRLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKE 280 (429)
T ss_pred -CCCcccCCHHHHHHHHHh------ccCCCcHHHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEecc
Confidence 789999999888766542 2455 59999999999999987 99999999999876 67888899999876
No 163
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=99.95 E-value=5e-26 Score=239.12 Aligned_cols=255 Identities=20% Similarity=0.298 Sum_probs=174.0
Q ss_pred CCeEEEEECccceecCCCc----ccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCcccc
Q 004665 14 VKRLVVKVGTAVVTRSDGR----LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~----~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~ 89 (738)
++++||++||++|...++. .+.+++...+++|+.+.+.|++++|+||+|||+|...++....... .++. +.
T Consensus 2 ~~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~~---~~~~--~p 76 (313)
T PRK12454 2 KKRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKDV---GIPP--FP 76 (313)
T ss_pred CceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhccc---CCCC--Cc
Confidence 4699999999999875542 3446899999999999999999999999999999864442211100 0000 11
Q ss_pred chHHHHHHhhhHH--HHHHHHHHhhcCCCce------eEEEecCC--CCCccc---------------------------
Q 004665 90 LDGKACAAVGQSS--LMALYDTLFSQLDVTS------SQLLVTDS--DFRDED--------------------------- 132 (738)
Q Consensus 90 l~~~~~~~~g~~~--~~~~~~~~l~~~gi~~------~~~~~~~~--d~~~~~--------------------------- 132 (738)
|..-.+.+.|..+ +...+.+.|...|+.. .|..+... .|.++.
T Consensus 77 ld~~~a~sqG~igy~l~~al~~~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~~~d~ 156 (313)
T PRK12454 77 LDVAGAMTQGWIGYMIQQALRNELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKEDA 156 (313)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEcC
Confidence 1111112222222 1234567777777653 22223322 132210
Q ss_pred --------------ccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecc
Q 004665 133 --------------FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWD 198 (738)
Q Consensus 133 --------------~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~ 198 (738)
...+ .+.|+.||++|.|||+.|+..+.-. +..|. -| +-+ .++|
T Consensus 157 g~g~RrvV~SP~P~~ive-~~aI~~LLe~G~IvI~~GgGGiPV~-----------~~~g~--~~--------gve-aViD 213 (313)
T PRK12454 157 GRGWRRVVPSPDPLGIVE-IEVIKALVENGFIVIASGGGGIPVI-----------EEDGE--LK--------GVE-AVID 213 (313)
T ss_pred CCceEEEeCCCCCccccC-HHHHHHHHHCCCEEEEeCCCccceE-----------cCCCc--EE--------eee-eecC
Confidence 0112 7899999999999999874311110 00110 00 000 1489
Q ss_pred hhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCC-
Q 004665 199 NDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI- 277 (738)
Q Consensus 199 ~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi- 277 (738)
+|.+|+++|.+|+||+|+|+|||||||++ +++|++++|++++.+|+.+++..+ .+.+|||.+|+++|..++++|.
T Consensus 214 ~D~aAa~LA~~L~AD~LIiLTdVdGVy~~-~~~p~~~~i~~It~~e~~~~i~~g---~~~~GgM~pKv~AA~~~v~~gg~ 289 (313)
T PRK12454 214 KDLASELLAEELNADIFIILTDVEKVYLN-YGKPDQKPLDKVTVEEAKKYYEEG---HFKAGSMGPKILAAIRFVENGGK 289 (313)
T ss_pred ccHHHHHHHHHcCCCEEEEEeCCceeeCC-CCCCCCeEccccCHHHHHHHHhcC---CcCCCChHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999987 557889999999999988766532 4678999999999999999875
Q ss_pred cEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 278 PVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 278 ~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
+++|++ ++.+.+++.|+ .||.+.
T Consensus 290 ~a~I~~---~~~i~~aL~G~-~GT~I~ 312 (313)
T PRK12454 290 RAIIAS---LEKAVEALEGK-TGTRII 312 (313)
T ss_pred eEEECc---hHHHHHHHCCC-CCeEeC
Confidence 599985 67788888888 799875
No 164
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=1.1e-26 Score=242.72 Aligned_cols=234 Identities=25% Similarity=0.290 Sum_probs=163.1
Q ss_pred EEEEECccceecCCCcccHHHHHHHHHHHHHHHh-CCCeEEEEcCChhhhhHHHhccccccc---CCcccccCccccchH
Q 004665 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNS-QGFEIILVSSGAVGVGRQRLRYRKLVN---SSLADLQKPQNELDG 92 (738)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~-~g~~vvlV~GGg~~~g~~~l~~~~~~~---~~~~~~~~~~~~l~~ 92 (738)
+||||||+++++++ .+.+++++|+.+.. .|.++|||||||+++.. .++...... .+.+.++...+...
T Consensus 1 ~ViK~GGs~l~~~~------~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~-~~~~~g~~~~~~~g~rvt~~~~l~~~- 72 (252)
T cd04249 1 LVIKLGGALLETEA------ALEQLFSALSEYQQQHNRQLVIVHGGGCVVDE-LLKKLNFPSEKKNGLRVTPKEQIPYI- 72 (252)
T ss_pred CEEEEChHHhcChh------hHHHHHHHHHHHHHhCCCCEEEECCCCHHHHH-HHHHcCCCCEEECCEecCCHHHHHHH-
Confidence 48999999998754 47899999998854 46889999999987665 344333321 12222222221111
Q ss_pred HHHHHh-hhHHHHHHHHHHhhcCCCceeEEEecCC----------CCC--cccccccHHHHHHHHHhCCceEEEeCCCce
Q 004665 93 KACAAV-GQSSLMALYDTLFSQLDVTSSQLLVTDS----------DFR--DEDFRKQLYDTVQSLLDLRVIPIFNENDAV 159 (738)
Q Consensus 93 ~~~~~~-g~~~~~~~~~~~l~~~gi~~~~~~~~~~----------d~~--~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v 159 (738)
..++ ++... .+++. +.+.|+++..+...+. |+. ......+ .+.|+.+|+.|.|||+++ ..+
T Consensus 73 --~~~~~~~~n~-~lv~~-l~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~G~v~~i~-~~~l~~ll~~g~ipVi~~-~g~ 146 (252)
T cd04249 73 --TGALAGTANK-QLMAQ-AIKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATAND-PSLLNDLLKAGFLPIISS-IGA 146 (252)
T ss_pred --HHHHcCcccH-HHHHH-HHhCCCCceeeeccCCCEEEEEEcCCCCCcccceEEEc-HHHHHHHHHCCCEEEECC-CEE
Confidence 1121 22211 12334 4478888766532221 222 2233445 899999999999999964 111
Q ss_pred eccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccce
Q 004665 160 STRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHT 239 (738)
Q Consensus 160 ~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~ 239 (738)
.. .| +..++|+|++|+++|.+|+|+ ++|+|||+|||++| +++|++
T Consensus 147 ~~--------------~g---------------~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~-----~~~i~~ 191 (252)
T cd04249 147 DD--------------QG---------------QLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDAD-----KQLISE 191 (252)
T ss_pred CC--------------CC---------------CEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCC-----CcCccc
Confidence 11 11 112399999999999999999 78999999999875 479999
Q ss_pred eeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcC-CcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 240 YIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 240 i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~g-i~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
++.+|+.+.+. ..+++|||.+|+++|..+++++ ++++|+||+.|+.+.++++|+..||.+
T Consensus 192 i~~~e~~~~~~----~g~~~gGm~~kl~~a~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~I 252 (252)
T cd04249 192 LNAKQAAELIE----QGVITDGMIVKVNAALDAAQSLRRGIDIASWQYPEQLTALLAGEPVGTKI 252 (252)
T ss_pred cCHHHHHHHHh----cCCCcCCcHHHHHHHHHHHHhCCCeEEEEeCCCccHHHHHHcCCCCCcCC
Confidence 99988876554 3478999999999999998876 569999999999988999999889864
No 165
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK).
Probab=99.94 E-value=6.1e-26 Score=239.01 Aligned_cols=250 Identities=23% Similarity=0.302 Sum_probs=171.4
Q ss_pred eEEEEECccceecCCC----cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc---CCcccccCccc
Q 004665 16 RLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN---SSLADLQKPQN 88 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~----~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~---~~~~~~~~~~~ 88 (738)
++||||||++|...++ ..+.+++...+++|+.+.+.|++++||||||||+|...++...... ..+.+.-..+
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~~~~~~~pld~~~a~- 79 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAAEKVPAYPLDVCGAM- 79 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccccCCCCCcchhcch-
Confidence 5899999999977553 4799999999999999999999999999999999976444322110 0111111111
Q ss_pred cchHHHHHHhhhHHHHHHHHHHhhcCCCce------eEEEecC--CCCCccc----------------------------
Q 004665 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTS------SQLLVTD--SDFRDED---------------------------- 132 (738)
Q Consensus 89 ~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~------~~~~~~~--~d~~~~~---------------------------- 132 (738)
-.--+|... ...+.+.|...|+.. .+..+.. ..|.++.
T Consensus 80 -----~~G~ig~~~-~~al~~~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~~d~~ 153 (308)
T cd04235 80 -----SQGMIGYML-QQALDNELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFKEDAG 153 (308)
T ss_pred -----hhHHHHHHH-HHHHHHHHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEeCC
Confidence 011122222 224567777777643 1122221 1122110
Q ss_pred -cc------------ccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecch
Q 004665 133 -FR------------KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDN 199 (738)
Q Consensus 133 -~~------------~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~ 199 (738)
.+ .+ .+.|+.||++|+|||+.|+..+.. .. ..|. - . +-+ .++|+
T Consensus 154 ~g~rrvV~SP~P~~iv~-~~~I~~Ll~~g~IpI~~GggGiPv-----~~------~~~~--~----~----gve-aVid~ 210 (308)
T cd04235 154 RGYRRVVPSPKPKDIVE-IEAIKTLVDNGVIVIAAGGGGIPV-----VR------EGGG--L----K----GVE-AVIDK 210 (308)
T ss_pred CCceeeeCCCCCccccC-HHHHHHHHHCCCEEEEECCCccCE-----EE------cCCc--e----e----eee-eccCc
Confidence 01 12 588999999999999987422111 10 0000 0 0 000 14899
Q ss_pred hhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcC-Cc
Q 004665 200 DSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IP 278 (738)
Q Consensus 200 D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~g-i~ 278 (738)
|++|+++|.+|+||+|+|+|||||||+++ ++|++++|++++++|+.+.+.. +.+.+|||.+|+++|..+++.| .+
T Consensus 211 D~~AallA~~l~Ad~LiilTdVdGVy~~~-~~pda~~i~~Is~~e~~~l~~~---g~~~tGGM~pKv~aA~~~a~~gg~~ 286 (308)
T cd04235 211 DLASALLAEEINADLLVILTDVDNVYINF-GKPNQKALEQVTVEELEKYIEE---GQFAPGSMGPKVEAAIRFVESGGKK 286 (308)
T ss_pred cHHHHHHHHHcCCCEEEEEecCCeEECCC-CCCCCeEcCCcCHHHHHHHHhc---CccccCCcHHHHHHHHHHHHhCCCe
Confidence 99999999999999999999999999965 4688999999999998866543 3577999999999999988875 56
Q ss_pred EEEEeCccchhHHHhhcCceeEEEE
Q 004665 279 VVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 279 v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
++|++ ++.+.+++.|+ .||.+
T Consensus 287 v~I~~---~~~i~~aL~G~-~GT~I 307 (308)
T cd04235 287 AIITS---LENAEAALEGK-AGTVI 307 (308)
T ss_pred EEECC---HHHHHHHHCCC-CCeEE
Confidence 89977 67788888887 69976
No 166
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.94 E-value=4.4e-26 Score=237.47 Aligned_cols=229 Identities=18% Similarity=0.216 Sum_probs=164.8
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHH
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 94 (738)
..+|||||||+|++++ .+.+..++++|+++.+ +++++||||||.. +|.+....... + ++. ..+..+.
T Consensus 31 ~~~ViKiGGSvitdk~----~~~i~~la~~i~~~~~-~~~vilV~GGG~~-~r~~~~~~~~~--g---~~~--~~~~~~~ 97 (262)
T cd04255 31 DLNVVKIGGQSIIDRG----AEAVLPLVEEIVALRP-EHKLLILTGGGTR-ARHVYSIGLDL--G---MPT--GVLAKLG 97 (262)
T ss_pred CcEEEEeccceecCCc----HHHHHHHHHHHHHHhC-CCcEEEEECCHHH-HHHHHHHHHHc--C---CCc--hHHHHHH
Confidence 3699999999999975 5679999999999987 6899999988864 45322111110 1 111 1122345
Q ss_pred HHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccccccccc
Q 004665 95 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTS 174 (738)
Q Consensus 95 ~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~ 174 (738)
+++.+++.++ ++..|..+|++. ++.. + .+.++.+|+.|+|||++|++.+....+
T Consensus 98 ~aa~~ln~lv--~~~~l~~~g~~~----i~~~---------~-~~~l~~lL~~g~vPVi~g~~~~~~~~i---------- 151 (262)
T cd04255 98 ASVSEQNAEM--LATLLAKHGGSK----VGHG---------D-LLQLPTFLKAGRAPVISGMPPYGLWEH---------- 151 (262)
T ss_pred HHHHHHHHHH--HHHHHHHcCCCc----cccc---------c-HHHHHHHHHCCCeEEEeCCcCCCeeee----------
Confidence 6666776554 357777778764 1211 2 345889999999999999765443110
Q ss_pred ccccccccccccccccCCCce--ecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhc
Q 004665 175 LENYLKPFRSSFLCFYDSSGI--FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITF 251 (738)
Q Consensus 175 ~~g~~~p~~~~~~~~~~~~g~--~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~ 251 (738)
.+..|. ++|+|++|+++|.+|+|++|+++|||||||++||+ +|++++|++++++++.+....
T Consensus 152 ---------------~~~~g~~~~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~ 216 (262)
T cd04255 152 ---------------PAEEGRIPPHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLD 216 (262)
T ss_pred ---------------cCCCccCCCCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcC
Confidence 011222 59999999999999999999999999999999995 799999999998776643211
Q ss_pred CCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 252 GDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 252 ~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
. ...++||..|++++ +..++|+|+||+.|+.+.+++.|+..||++.
T Consensus 217 ~---~~~~~~~~~~l~aa----~~~~~v~I~~g~~~~~L~~~l~g~~~GT~i~ 262 (262)
T cd04255 217 D---LVLERPVLDLLQNA----RHVKEVQIVNGLVPGNLTRALRGEHVGTIIR 262 (262)
T ss_pred C---CCCcHHHHHHHHHh----CCCCcEEEEeCCCCCHHHHHHcCCCCceEeC
Confidence 1 12467787776664 3336899999999999999999998999874
No 167
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.94 E-value=1.6e-26 Score=242.09 Aligned_cols=235 Identities=24% Similarity=0.323 Sum_probs=167.4
Q ss_pred EEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc---CCcccccCccccchHH
Q 004665 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN---SSLADLQKPQNELDGK 93 (738)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~---~~~~~~~~~~~~l~~~ 93 (738)
+||||||++++++. .+..++++|+.|+..|.++|||||||++ ++..++.+.... .+.+.++...+++..
T Consensus 1 ~ViKlGGs~l~~~~------~~~~~~~~i~~l~~~g~~~VlVhG~g~~-~~~~~~~~~~~~~~~~~~r~t~~~~l~~~~- 72 (256)
T cd04238 1 VVIKYGGSAMKDEE------LKEAFADDIVLLKQVGINPVIVHGGGPE-INELLKRLGIESEFVNGLRVTDKETMEIVE- 72 (256)
T ss_pred CEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEECCCcHH-HHHHHHHCCCCCEeECCeecCCHHHHHHHH-
Confidence 59999999999875 3688999999999999999999987765 444454444321 111112221112211
Q ss_pred HHHHh-hhHHHHHHHHHHhhcCCCceeEEEecCC-------------C--CCcccccccHHHHHHHHHhCCceEEEeCCC
Q 004665 94 ACAAV-GQSSLMALYDTLFSQLDVTSSQLLVTDS-------------D--FRDEDFRKQLYDTVQSLLDLRVIPIFNEND 157 (738)
Q Consensus 94 ~~~~~-g~~~~~~~~~~~l~~~gi~~~~~~~~~~-------------d--~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~ 157 (738)
.++ |. +...+...|++.|+++..+...+. | |.......+ .+.|+.+|++|.|||+++
T Consensus 73 --~a~~g~--ln~~i~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~-~~~l~~ll~~g~ipVv~~-- 145 (256)
T cd04238 73 --MVLAGK--VNKELVSLLNRAGGKAVGLSGKDGGLIKAEKKEEKDIDLGFVGEVTEVN-PELLETLLEAGYIPVIAP-- 145 (256)
T ss_pred --HHHcCc--hHHHHHHHHHhCCCCCCCcccccCCEEEEEECCCCCCCcccccceEEEC-HHHHHHHHHCCCEEEECC--
Confidence 222 32 223356788888887654322111 1 222333445 899999999999999963
Q ss_pred ceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCcccc
Q 004665 158 AVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLI 237 (738)
Q Consensus 158 ~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i 237 (738)
+..+ ..| +..++|+|++|+++|.+|+|++|+|+|||+|||+++ +++|
T Consensus 146 -~~~~------------~~g---------------~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~~-----~~~i 192 (256)
T cd04238 146 -IAVD------------EDG---------------ETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDDP-----GSLI 192 (256)
T ss_pred -cEEC------------CCC---------------cEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCCC-----CCcc
Confidence 2221 011 112599999999999999999999999999999872 7899
Q ss_pred ceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchhHHHhhcC-ceeEEEE
Q 004665 238 HTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEG-KRVGTLF 303 (738)
Q Consensus 238 ~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i~~~~tg-~~iGTvi 303 (738)
++++.+|+.+.+. ..+++|||.+|+++|..++++|++ |+|+||+.|+.+...+.+ +..||.+
T Consensus 193 ~~i~~~e~~~~~~----~~~~~ggm~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 193 SELTPKEAEELIE----DGVISGGMIPKVEAALEALEGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred ccCCHHHHHHHHH----cCCCCCChHHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 9999988875543 346799999999999999999885 999999999999987766 5678863
No 168
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=99.94 E-value=8.3e-26 Score=232.81 Aligned_cols=228 Identities=19% Similarity=0.253 Sum_probs=167.0
Q ss_pred CeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhh-hHHHhcccccccCCcccccCccccchH
Q 004665 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQNELDG 92 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~-g~~~l~~~~~~~~~~~~~~~~~~~l~~ 92 (738)
|++|||||||+|++++. +++.+.+.+++++|+++...|+++|||||||..+ +.. ...++.. .....
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~-~~~~~~~-----~~~~d------ 68 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGAS-AAEAGMD-----RATAD------ 68 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccch-hhhcCCC-----chhhh------
Confidence 47999999999998863 5789999999999999998889999999998543 321 1222211 11111
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccccccc
Q 004665 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKD 172 (738)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~ 172 (738)
.+..++......++...|.+.|+++..+...+.++. ....+ .+.++.+|++|.|||++|. .
T Consensus 69 -~~g~~~~~~n~~ll~~~L~~~Gv~a~~l~~~~~~~~--~~~~~-~~~l~~~l~~g~ipV~~g~----~----------- 129 (231)
T cd04254 69 -YMGMLATVINALALQDALESLGVKTRVMSAIPMQGV--AEPYI-RRRAIRHLEKGRVVIFAGG----T----------- 129 (231)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCeEEEcHHHhhhh--hcccC-HHHHHHHHHCCCEEEEECC----c-----------
Confidence 111122222223466888899987654322111111 11123 6789999999999999641 0
Q ss_pred ccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhc
Q 004665 173 TSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITF 251 (738)
Q Consensus 173 ~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~ 251 (738)
| . .++++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++++++|+.+ .
T Consensus 130 ----G--~--------------~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~---~ 186 (231)
T cd04254 130 ----G--N--------------PFFTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLS---K 186 (231)
T ss_pred ----C--C--------------CCCCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHh---c
Confidence 1 1 137899999999999999999999999999999995 89999999999987753 1
Q ss_pred CCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 252 GDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 252 ~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
+ .. ..+++++..+.++|++++|+||+.|+.+.+++.|+..||++.
T Consensus 187 ~------~~--~~d~~a~~~a~~~gi~~~I~~g~~~~~l~~~l~g~~~GT~i~ 231 (231)
T cd04254 187 G------LK--VMDATAFTLCRDNNLPIVVFNINEPGNLLKAVKGEGVGTLIS 231 (231)
T ss_pred c------hh--hhHHHHHHHHHHCCCeEEEEeCCCccHHHHHHCCCCCCEEeC
Confidence 1 12 237888888888999999999999999999999988999873
No 169
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=99.94 E-value=2e-25 Score=230.23 Aligned_cols=229 Identities=20% Similarity=0.249 Sum_probs=165.8
Q ss_pred CCeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhh-hHHHhcccccccCCcccccCccccch
Q 004665 14 VKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQNELD 91 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~-g~~~l~~~~~~~~~~~~~~~~~~~l~ 91 (738)
++++|||||||+|++... +++.+++.+++++|+++...|+++|||||||..+ ++. .+.+.... .+ .+
T Consensus 1 ~~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~-a~~~~~~~-~~--~d------- 69 (233)
T TIGR02075 1 YKRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVS-AKELGIDR-VT--AD------- 69 (233)
T ss_pred CCEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHH-HHhcCCCC-cc--HH-------
Confidence 368999999999998322 5889999999999999998889999999887433 442 22222110 01 11
Q ss_pred HHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccc
Q 004665 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHK 171 (738)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~ 171 (738)
.+.+.++.....++...|.+.|+++..+ +..++........ .+.++.+|++|.|||+++..
T Consensus 70 --~~g~~~~~l~~~l~~~~L~~~Gi~a~~l--~~~~~~~~~~~~~-~~~i~~ll~~g~VpV~~g~~-------------- 130 (233)
T TIGR02075 70 --YMGMLATVINGLALRDALEKLGVKTRVL--SAISMPQICESYI-RRKAIKHLEKGKVVIFSGGT-------------- 130 (233)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCCCCcEEe--ccccCCCCccccC-HHHHHHHHHCCCEEEEECCC--------------
Confidence 1111122122223468899999887433 2222221111112 57888999999999996410
Q ss_pred cccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeecc-ccccccCCcc-cCCccccceeeccchHHHH
Q 004665 172 DTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPPS-EPNSKLIHTYIRAKHQAEI 249 (738)
Q Consensus 172 ~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~Td-V~GV~~~dP~-~~~a~~i~~i~~~e~~~~i 249 (738)
| ..++++|++|+++|.+|+||+|+|+|| |||||++||+ +|++++|++++++|+.+.
T Consensus 131 -----g----------------~~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~- 188 (233)
T TIGR02075 131 -----G----------------NPFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK- 188 (233)
T ss_pred -----C----------------CCCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc-
Confidence 1 024889999999999999999999999 9999999995 899999999998886521
Q ss_pred hcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 250 TFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 250 ~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
+ .. ..+++++..+.++|++++|+||..|+.+.++++|+..||++.
T Consensus 189 --~------~~--~~d~~~~~~a~~~~i~v~i~~g~~~~~l~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 189 --N------LK--VMDLTAFALARDNNLPIVVFNIDEPGALKKVILGKGIGTLVS 233 (233)
T ss_pred --C------HH--HHHHHHHHHHHHCCCeEEEEeCCCcchHHHHHCCCCCCEEeC
Confidence 1 11 346788888888999999999999999999999998999873
No 170
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.94 E-value=4.6e-26 Score=236.16 Aligned_cols=225 Identities=18% Similarity=0.234 Sum_probs=163.7
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHHH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (738)
.+||||||+++.+. +.+.+++++|+++.+.|+++|||||||+..+...++...... .+. +.. ..+++
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~~-~~~--~~~----~~~~i 67 (239)
T cd04246 1 IIVQKFGGTSVADI------ERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEVS-PRP--SPR----ELDML 67 (239)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHhc-cCC--CHH----HHHHH
Confidence 37999999999863 468999999999999999999999876555554454433211 111 111 12466
Q ss_pred HHhhhHHHHHHHHHHhhcCCCceeEEE------ecCCCCCcc-cccccHHHHHHHHHhCCceEEEeCCCceeccCCCccc
Q 004665 96 AAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSDFRDE-DFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 96 ~~~g~~~~~~~~~~~l~~~gi~~~~~~------~~~~d~~~~-~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~ 168 (738)
.++|+...+.++...|+++|+++..+. ++...+.+. ....+ .+.++.+|++|.|||+.|.-+...
T Consensus 68 ~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~~~~~~-~~~l~~ll~~g~ipVi~g~~~~~~------- 139 (239)
T cd04246 68 LSTGEQISAALLAMALNRLGIKAISLTGWQAGILTDDHHGNARIIDID-PKRILEALEEGDVVVVAGFQGVNE------- 139 (239)
T ss_pred HHHhHHHHHHHHHHHHHhCCCCeEEeccccCCEEecCCCCceeechhh-HHHHHHHHhcCCEEEEcCccccCC-------
Confidence 777887777778999999999876542 222233221 11223 689999999999999976211000
Q ss_pred ccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHH
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQA 247 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~ 247 (738)
.| .. ++. .+.++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++++++|+.+
T Consensus 140 -------~g--~~------~~l----~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~ 200 (239)
T cd04246 140 -------DG--EI------TTL----GRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLE 200 (239)
T ss_pred -------CC--CE------Eec----CCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHH
Confidence 00 00 000 124899999999999999999999999999999995 79999999999999885
Q ss_pred HHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccch
Q 004665 248 EITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 288 (738)
Q Consensus 248 ~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 288 (738)
... .|.+..|++++..+.++|+|++|.|++.|+
T Consensus 201 l~~--------~G~~~~~~~a~~~a~~~gi~i~i~~~~~~~ 233 (239)
T cd04246 201 MAS--------LGAKVLHPRSVELAKKYNVPLRVRSSFSEN 233 (239)
T ss_pred HHh--------CCCcccCHHHHHHHHHCCCeEEEecCCCCC
Confidence 443 255678899999999999999999998874
No 171
>PRK14556 pyrH uridylate kinase; Provisional
Probab=99.94 E-value=2.5e-25 Score=227.34 Aligned_cols=235 Identities=17% Similarity=0.239 Sum_probs=170.9
Q ss_pred hhccCCeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccc
Q 004665 10 FVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQN 88 (738)
Q Consensus 10 ~~~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~ 88 (738)
++++++++|+|+||++|..+++ .+|.+.+..++++|+.+.+.|+++.||.|||..+--........ ++...-
T Consensus 11 ~~~~~~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni~Rg~~~~~~~~-------~~r~~~ 83 (249)
T PRK14556 11 KLPKLKRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNILRGGRANFGNK-------IRRATA 83 (249)
T ss_pred hhhhhCEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHhCchhhccCC-------Cchhhh
Confidence 4567899999999999987654 58999999999999999999999999999986443211111001 111111
Q ss_pred cchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEE-ecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcc
Q 004665 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL-VTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (738)
Q Consensus 89 ~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~-~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~ 167 (738)
...+ +++++-+.. ++...|...|+++.-+. +....+.. .+ + .+.+..+|++|.|+|+.|
T Consensus 84 D~~G-mlaT~iNal---~l~~~l~~~~~~~~v~sa~~~~~~~e--~~-~-~~~~~~~l~~g~vvi~~g------------ 143 (249)
T PRK14556 84 DSMG-MIATMINAL---ALRDMLISEGVDAEVFSAKGVDGLLK--VA-S-AHEFNQELAKGRVLIFAG------------ 143 (249)
T ss_pred hHHH-HHHHHHHHH---HHHHHHHHcCCCeEEeeccccCcCCC--CC-C-HHHHHHHHhCCCEEEEEC------------
Confidence 1122 333333322 24578888888753221 21222322 22 3 566678999999999854
Q ss_pred cccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchH
Q 004665 168 VTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQ 246 (738)
Q Consensus 168 ~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~ 246 (738)
|.+.| ++++|++|+++|.+++||.|+++|||||||++||+ +|++++|+++++.|..
T Consensus 144 ---------g~G~p--------------~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~ 200 (249)
T PRK14556 144 ---------GTGNP--------------FVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVV 200 (249)
T ss_pred ---------CCCCC--------------cCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhc
Confidence 11122 48999999999999999999999999999999994 9999999999998775
Q ss_pred HHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEcc
Q 004665 247 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 305 (738)
Q Consensus 247 ~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~ 305 (738)
.. + ...| +..++..+.++|++++|+|++.|+.+.+++.|+..||++..
T Consensus 201 ~~---~------l~vm--d~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 201 SK---E------LNVM--DLGAFTQCRDFGIPIYVFDLTQPNALVDAVLDSKYGTWVTL 248 (249)
T ss_pred cc---c------hHhH--HHHHHHHHHHCCCcEEEECCCCchHHHHHHcCCCCceEEEe
Confidence 31 0 1123 45688888999999999999999999999999999999853
No 172
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.94 E-value=2.6e-26 Score=239.93 Aligned_cols=221 Identities=27% Similarity=0.361 Sum_probs=158.2
Q ss_pred EEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc---C---Cc--ccccCccc
Q 004665 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN---S---SL--ADLQKPQN 88 (738)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~---~---~~--~~~~~~~~ 88 (738)
+||||||+++++ +..++++|+.| |.++|||||||+++.. .++.+.... . +. +.++...+
T Consensus 1 ~VIKlGGs~l~~---------~~~~~~~i~~l---g~~~VlVHGgg~~i~~-~~~~~gi~~~~~~~~~G~~~Rvt~~~~l 67 (257)
T cd04251 1 IVVKIGGSVVSD---------LDKVIDDIANF---GERLIVVHGGGNYVNE-YLKRLGVEPKFVTSPSGIRSRYTDKETL 67 (257)
T ss_pred CEEEEChHHhhC---------hHHHHHHHHHc---CCCEEEECCCHHHHHH-HHHHcCCCcEEEeCCCCCccccCCHHHH
Confidence 589999999985 35799999988 8899999999987665 344444322 1 11 12222222
Q ss_pred cchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEec------------------------CCCCCcccccccHHHHHHHH
Q 004665 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVT------------------------DSDFRDEDFRKQLYDTVQSL 144 (738)
Q Consensus 89 ~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~------------------------~~d~~~~~~~~~~~~~i~~l 144 (738)
.... .+++... ..+.+.|++.|+++..+.-. +..|.......+ .+.|+.+
T Consensus 68 ~~~~---~a~~~ln--~~iv~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~-~~~i~~l 141 (257)
T cd04251 68 EVFV---MVMGLIN--KKIVARLHSLGVKAVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVN-SDLIEAL 141 (257)
T ss_pred HHHH---HHHHHHH--HHHHHHHHhCCCCceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEc-HHHHHHH
Confidence 2222 2223322 23456888888876443211 111222233445 8999999
Q ss_pred HhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCc-e-ecchhhHHHHHHhhcCCCEEEeecccc
Q 004665 145 LDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG-I-FWDNDSLAGLLALELKADLLVLLSDVE 222 (738)
Q Consensus 145 L~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~-~i~~D~~A~~lA~~L~A~~li~~TdV~ 222 (738)
|++|.|||+++ +.. +.+| . ++|+|++|+.+|.+|+|++|+|+|||+
T Consensus 142 l~~g~vpVi~~---~~~-----------------------------~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~ 189 (257)
T cd04251 142 LDAGYLPVVSP---VAY-----------------------------SEEGEPLNVDGDRAAAAIAAALKAERLILLTDVE 189 (257)
T ss_pred HhCCCeEEEeC---cEE-----------------------------CCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCCh
Confidence 99999999942 111 1122 2 399999999999999999999999999
Q ss_pred ccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEEEeCccchhHHHhhcCceeEE
Q 004665 223 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGT 301 (738)
Q Consensus 223 GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i~~~~tg~~iGT 301 (738)
|||++ +++|++++.+|+.+.+ .+++|||.+|+++|..++++|++ |+|++|+.|+.+..++.|+ ||
T Consensus 190 Gv~~~------~~~i~~i~~~e~~~l~------~~~~ggm~~Kl~aa~~a~~~gv~~v~i~~g~~~~~l~~~l~g~--gT 255 (257)
T cd04251 190 GLYLD------GRVIERITVSDAESLL------EKAGGGMKRKLLAAAEAVEGGVREVVIGDARADSPISSALNGG--GT 255 (257)
T ss_pred hheeC------CcccCccCHHHHHHHH------hhCCCchHHHHHHHHHHHHcCCCEEEEecCCCccHHHHHHcCC--Cc
Confidence 99975 6899999998887544 25899999999999999999996 9999999999999988774 77
Q ss_pred E
Q 004665 302 L 302 (738)
Q Consensus 302 v 302 (738)
.
T Consensus 256 ~ 256 (257)
T cd04251 256 V 256 (257)
T ss_pred C
Confidence 5
No 173
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=99.94 E-value=4.8e-26 Score=234.85 Aligned_cols=214 Identities=27% Similarity=0.349 Sum_probs=150.6
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccc---cCCcccccCccccchH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV---NSSLADLQKPQNELDG 92 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~---~~~~~~~~~~~~~l~~ 92 (738)
++||||||++++++ +.+++++|+.|++.|.++|||||||+++.. .++..... ..+.+.++...++...
T Consensus 1 ~~ViK~GGs~l~~~--------~~~~~~~i~~l~~~g~~~VlVhggg~~~~~-~~~~~~~~~~~~~g~r~t~~~~~~~~~ 71 (231)
T TIGR00761 1 TIVIKIGGAAISDL--------LEAFASDIAFLRAVGIKPVIVHGGGPEINE-LLEALGIPPEFKNGLRVTDKETLEVVE 71 (231)
T ss_pred CEEEEEChHHHhcc--------HHHHHHHHHHHHHcCCCEEEEcCCcHHHHH-HHHHcCCCCEecCCCccCCHHHHHHHH
Confidence 58999999999874 689999999999999999999988876554 34333321 1122222211111111
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCCCceeEE------EecCC-----CCC--cccccccHHHHHHHHHhCCceEEEeCCCce
Q 004665 93 KACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDS-----DFR--DEDFRKQLYDTVQSLLDLRVIPIFNENDAV 159 (738)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~-----d~~--~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v 159 (738)
+ +..|+.. ..+.+.|++.|+++.++ +++.. |+. ......+ .+.|+.+|++|.|||+++. ++
T Consensus 72 ~--~~~g~~~--~~i~~~L~~~G~~a~~l~~~~~~~it~~~~~~~~~~~~g~i~~i~-~~~i~~~l~~g~IPVi~~~-~~ 145 (231)
T TIGR00761 72 M--VLIGQVN--KELVALLNKHGINAIGLTGGDGQLFTARSLDKEDLGYVGEIKKVN-KALLEALLKAGYIPVISSL-AL 145 (231)
T ss_pred H--HHhcchH--HHHHHHHHhCCCCcccccCCCCCEEEEEECCCccCCcccceEEEc-HHHHHHHHHCCCeEEECCC-cc
Confidence 1 1123322 23456888889887664 22211 121 2233455 8999999999999999751 11
Q ss_pred eccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccce
Q 004665 160 STRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHT 239 (738)
Q Consensus 160 ~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~ 239 (738)
.. .| +..++|+|++|+.+|.+|+|++|+|+|||+|||++|| +++|++
T Consensus 146 ~~--------------~g---------------~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~----~~~i~~ 192 (231)
T TIGR00761 146 TA--------------EG---------------QALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDG----QSLISE 192 (231)
T ss_pred CC--------------CC---------------cEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCC----Ceeccc
Confidence 11 11 1124999999999999999999999999999999876 469999
Q ss_pred eeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-EEE
Q 004665 240 YIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVI 281 (738)
Q Consensus 240 i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I 281 (738)
|+.+|+.+++.. .+++|||++|+++|..++++|++ |||
T Consensus 193 i~~~e~~~l~~~----~~~tggm~~Kl~~a~~a~~~gv~~v~i 231 (231)
T TIGR00761 193 IPLEEIEQLIEQ----GIITGGMIPKVNAALEALRGGVKSVHI 231 (231)
T ss_pred cCHHHHHHHHHc----CCCCCchHHHHHHHHHHHHcCCCEEEC
Confidence 999888765542 46899999999999999999998 665
No 174
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and
Probab=99.94 E-value=6.2e-26 Score=235.12 Aligned_cols=220 Identities=20% Similarity=0.278 Sum_probs=164.3
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHHH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (738)
.+||||||+++.+. +.+.+++++|+.+.+.|+++||||||++..+...++...... . ..+.. ..+++
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~-~--~~~~~----~~~~i 67 (239)
T cd04261 1 LIVQKFGGTSVASI------ERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS-P--RPPAR----ELDVL 67 (239)
T ss_pred CEEEEECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc-c--CCCHH----HHHHH
Confidence 37999999999763 468999999999999999999999986656654444321110 0 01111 12356
Q ss_pred HHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCc-ccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccc
Q 004665 96 AAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 96 ~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~-~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~ 168 (738)
.+.|+...+.++...|.+.|+++..+ +++..+|.. .....+ .+.|+.++++|.|||++|.-+.
T Consensus 68 ~a~Ge~~~~~l~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~i~~~~-~~~l~~ll~~~~ipVi~G~~~~--------- 137 (239)
T cd04261 68 LSTGEQVSIALLAMALNRLGIKAISLTGWQAGILTDGHHGKARIIDID-PDRIRELLEEGDVVIVAGFQGI--------- 137 (239)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEechhhCCEEecCCCCcceechhh-HHHHHHHHHcCCeEEEcCcccc---------
Confidence 77888777777899999999986543 233344422 222334 6899999999999999762111
Q ss_pred ccccccccccccccccccccccCCCce-----ecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeec
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGI-----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR 242 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~-----~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~ 242 (738)
++++. +.++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|++
T Consensus 138 ----------------------~~~g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~ 195 (239)
T cd04261 138 ----------------------NEDGDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISY 195 (239)
T ss_pred ----------------------CCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCH
Confidence 11111 24899999999999999999999999999999995 789999999999
Q ss_pred cchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccch
Q 004665 243 AKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 288 (738)
Q Consensus 243 ~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 288 (738)
+|+.+... .|.+..|++++..+.++|++++|.|++.|+
T Consensus 196 ~ea~~l~~--------~G~~~~~~~a~~~~~~~~i~i~I~n~~~~~ 233 (239)
T cd04261 196 DEMLEMAS--------LGAKVLHPRSVELAKKYGVPLRVLSSFSEE 233 (239)
T ss_pred HHHHHHHh--------ccccccCHHHHHHHHHcCCeEEEecCCCCC
Confidence 99885443 255677899999999999999999998874
No 175
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=99.94 E-value=1.2e-25 Score=233.86 Aligned_cols=227 Identities=19% Similarity=0.198 Sum_probs=159.1
Q ss_pred EEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccc---cCCcccccCccccchHHH
Q 004665 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV---NSSLADLQKPQNELDGKA 94 (738)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~---~~~~~~~~~~~~~l~~~~ 94 (738)
|||+||+++++. +..++++|+.|++.|.++|||||||+++... ++.+... ..+.+.++...+....++
T Consensus 2 ViKiGG~~~~~~--------l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~-~~~~gi~~~~~~g~RvT~~~~l~~v~~a 72 (248)
T cd04252 2 VIKVGGAIIEDD--------LDELAASLSFLQHVGLYPIVVHGAGPQLNEE-LEAAGVEPEYVDGLRVTDPETLAVARKV 72 (248)
T ss_pred EEEEChhhhhcc--------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHH-HHHcCCCcEeeCCcccCCHHHHHHHHHH
Confidence 899999999863 6899999999999999999999999987764 4433332 222232333222222222
Q ss_pred HHHhhhHHHHHHHHHHhhcCCCceeEE----Eec----CCCC--CcccccccHHHHHHHHHhCCceEEEeCCCceeccCC
Q 004665 95 CAAVGQSSLMALYDTLFSQLDVTSSQL----LVT----DSDF--RDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (738)
Q Consensus 95 ~~~~g~~~~~~~~~~~l~~~gi~~~~~----~~~----~~d~--~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~ 164 (738)
+. + +...+.+.|.+.|+++..+ +.. ..|| .......+ .+.|+.+|+.|+|||+++ +++.
T Consensus 73 l~---~--vn~~iv~~l~~~g~~a~~l~~~~~~a~~~~~~d~g~~G~v~~i~-~~~i~~~L~~g~IPVi~p-~~~~---- 141 (248)
T cd04252 73 FL---E--ENLKLVEALERNGARARPITSGVFEAEYLDKDKYGLVGKITGVN-KAPIEAAIRAGYLPILTS-LAET---- 141 (248)
T ss_pred HH---H--HHHHHHHHHHhCCCCcccccCceEEEEECcCccCCccCceeeEC-HHHHHHHHHCCCeEEECC-ceEC----
Confidence 22 2 1222446677777765443 111 1122 23334556 899999999999999953 1111
Q ss_pred CcccccccccccccccccccccccccCCCc-e-ecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeec
Q 004665 165 PYEVTHKDTSLENYLKPFRSSFLCFYDSSG-I-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR 242 (738)
Q Consensus 165 ~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~-~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~ 242 (738)
..| . ++|+|.+|+.+|.+|+|++|+|+|||+|||+++ +++|++++.
T Consensus 142 ---------------------------~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~-----g~~i~~i~~ 189 (248)
T cd04252 142 ---------------------------PSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGT-----GKKISAINL 189 (248)
T ss_pred ---------------------------CCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCC-----CCcccccCH
Confidence 112 2 399999999999999999999999999999753 689999997
Q ss_pred c-chHHHHhcCCCCccccCchHHHHHHHHHHHHc--CCc-EEEEeCccchhHHH-hhcCceeEEEE
Q 004665 243 A-KHQAEITFGDKSRVGRGGMTAKVNAAYCAACA--GIP-VVITSGFAMDSIIK-VLEGKRVGTLF 303 (738)
Q Consensus 243 ~-e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~--gi~-v~I~~g~~~~~i~~-~~tg~~iGTvi 303 (738)
. +..+.+. ..+++|||++|++++..+.+. ++. |+|++ ++.++. +++.+..||.+
T Consensus 190 ~~~~~~l~~----~~~vtgGM~~Kl~~~~~~~~~~~~~~~v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 190 DEEYDDLMK----QPWVKYGTKLKIKEIKELLDTLPRSSSVSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred HHHHHHHHH----cCCcCCchHHHHHHHHHHHHhCCCceEEEEEC---CchHHHHHhcCCCCCccC
Confidence 4 5554443 347899999999999988887 554 89988 577664 77877788864
No 176
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=99.94 E-value=5.6e-26 Score=236.36 Aligned_cols=220 Identities=16% Similarity=0.151 Sum_probs=163.6
Q ss_pred CCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHH
Q 004665 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (738)
.+-+|||+||++++++. .+.+++++|+.|++.|.++||||||||+++.. +. .. .+.. .++.
T Consensus 35 ~~f~VIK~GG~~~~~~~------~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~-l~-~~----~~~~---~~~v---- 95 (271)
T cd04236 35 PAFAVLEVDHSVFRSLE------MVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTN-MS-DL----ELQA---ARSR---- 95 (271)
T ss_pred CCEEEEEEChhhhcCch------hHHHHHHHHHHHHHCCCeEEEEeCCChHHhhh-hc-CC----cchh---eehh----
Confidence 46789999999997543 48899999999999999999999999999874 32 11 1111 1111
Q ss_pred HHHHhhhHHHHHHHHHHhhcCCCceeEEEec----------CCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccC
Q 004665 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVT----------DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 163 (738)
Q Consensus 94 ~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~----------~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~ 163 (738)
...... .+...|.+.|+++..+... +..+.......| .+.|+.+|++|+|||+.+ ++.
T Consensus 96 -~~~~n~-----~Lv~~L~~~G~~A~gl~g~~~~i~a~~~~d~g~vG~V~~Vd-~~~I~~lL~~g~IPVisp---lg~-- 163 (271)
T cd04236 96 -LVKDCK-----TLVEALQANSAAAHPLFSGESVLQAEEPEPGASKGPSVSVD-TELLQWCLGSGHIPLVCP---IGE-- 163 (271)
T ss_pred -HHHHHH-----HHHHHHHhCCCCeeeecCccceEEEEEcccCCccceEEEEC-HHHHHHHHhCCCeEEECC---ceE--
Confidence 111111 2335566666665554211 111333445566 999999999999999942 111
Q ss_pred CCcccccccccccccccccccccccccCCCc-ee-cchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceee
Q 004665 164 APYEVTHKDTSLENYLKPFRSSFLCFYDSSG-IF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYI 241 (738)
Q Consensus 164 ~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g-~~-i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~ 241 (738)
|..| .+ +|+|.+|..+|.+|+|++|+|+||++|||+++ +++|++|+
T Consensus 164 ---------------------------~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~-----g~lI~~l~ 211 (271)
T cd04236 164 ---------------------------TSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQK-----HKVLPQVH 211 (271)
T ss_pred ---------------------------CCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCC-----CCCccccC
Confidence 1223 23 99999999999999999999999999999753 78999999
Q ss_pred c-cchHHHHhcCCCCccccCch---HHHHHHHHHHHHcCCcEEEEeCccchhHH-HhhcCceeEEEE
Q 004665 242 R-AKHQAEITFGDKSRVGRGGM---TAKVNAAYCAACAGIPVVITSGFAMDSII-KVLEGKRVGTLF 303 (738)
Q Consensus 242 ~-~e~~~~i~~~~~~~~~~ggM---~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~-~~~tg~~iGTvi 303 (738)
. +|+.++++ .+.++||| +||+++|..++.+|+.|+|++ |+.+. ++++....||.+
T Consensus 212 ~~~e~~~li~----~g~i~gGm~~ki~ki~~~l~~l~~g~sv~I~~---~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 212 LPADLPSLSD----AEWLSETEQNRIQDIATLLNALPSMSSAVITS---AETLLTELFSHKGSGTLF 271 (271)
T ss_pred cHHHHHHHHh----CCEEcCCeeechHHHHHHHHhcccCCeEEEeC---hHHHHHHHhccCCCCCcC
Confidence 6 88887776 45789999 999999999999999999998 66665 589888888863
No 177
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=99.93 E-value=4.2e-25 Score=219.12 Aligned_cols=231 Identities=20% Similarity=0.246 Sum_probs=170.4
Q ss_pred ccCCeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccc
Q 004665 12 KDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 12 ~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l 90 (738)
.+++++|+|+||+++...++ .+|.+.+.+++++|+++.+.|++|.||.|||.-+-...... .. ++......
T Consensus 3 ~~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~-~g-------~~r~~~D~ 74 (238)
T COG0528 3 PKYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARGYIGAA-AG-------MDRVTADY 74 (238)
T ss_pred cceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHH-cC-------CchhhhhH
Confidence 45689999999999988665 58999999999999999999999999998886443221222 12 11111111
Q ss_pred hHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCc-ccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccc
Q 004665 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVT 169 (738)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~-~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~ 169 (738)
.+ +++++-+.. ++.+.|...|++..-. +...+.. ...+ + .....++|++|.|+|+.|
T Consensus 75 mG-mlaTvmNal---~L~~aL~~~~~~~~v~--sai~~~~~~e~~-~-~~~A~~~l~~grVvIf~g-------------- 132 (238)
T COG0528 75 MG-MLATVMNAL---ALQDALERLGVDTRVQ--SAIAMPQVAEPY-S-RREAIRHLEKGRVVIFGG-------------- 132 (238)
T ss_pred HH-HHHHHHHHH---HHHHHHHhcCCcceec--ccccCccccCcc-C-HHHHHHHHHcCCEEEEeC--------------
Confidence 22 233333322 3458888888875321 1111110 1122 2 445568999999999954
Q ss_pred cccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeecc-ccccccCCc-ccCCccccceeeccchHH
Q 004665 170 HKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPP-SEPNSKLIHTYIRAKHQA 247 (738)
Q Consensus 170 ~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~Td-V~GV~~~dP-~~~~a~~i~~i~~~e~~~ 247 (738)
|+++|| .++|++|+++|++++||.|+.+|+ |||||++|| ++||++++++||+.|+.+
T Consensus 133 -------Gtg~P~--------------fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~ 191 (238)
T COG0528 133 -------GTGNPG--------------FTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLK 191 (238)
T ss_pred -------CCCCCC--------------CchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHH
Confidence 445663 889999999999999999999995 999999999 599999999999999884
Q ss_pred HHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 248 EITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 248 ~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
.. ..-| +..+...|.++++|++++|.+.++++..++.|+..||.+.
T Consensus 192 ~~---------l~vm--D~tA~~l~~~~~i~i~Vfn~~~~~~l~~~~~ge~~gT~V~ 237 (238)
T COG0528 192 IG---------LKVM--DPTAFSLARDNGIPIIVFNINKPGNLKRALKGEEVGTIVE 237 (238)
T ss_pred hc---------Ceee--cHHHHHHHHHcCCcEEEEeCCCCccHHHHHcCCCCceEec
Confidence 21 1123 5678889999999999999999999999999999999875
No 178
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=99.93 E-value=7e-26 Score=235.24 Aligned_cols=232 Identities=25% Similarity=0.336 Sum_probs=158.0
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCccc----ccCcccc-
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD----LQKPQNE- 89 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~----~~~~~~~- 89 (738)
|++||||||+++++++ .+ +.+++++|+.+.+.|.++|||||||++.+.. +..+.... .+.+ .+.....
T Consensus 1 k~~ViK~GGs~l~~~~----~~-~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~-~~~~~~~~-~~~~~~r~~~~~~~~~ 73 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKD----EE-LRELADDIALLSQLGIKVVVVHGGGSFTDEL-LEKYGIEP-KFVDGSRVTDIETGLI 73 (242)
T ss_dssp SEEEEEE-HHGHSSHS----HH-HHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHHCTHTT-SEETHHCHBHHHHHHH
T ss_pred CeEEEEECchhhCCch----HH-HHHHHHHHHHHHhCCCeEEEEECChhhcCch-HHhccCCc-ccchhhhhhhhhhhHH
Confidence 6899999999999863 23 8999999999999999999999998866653 44443321 1110 0000000
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccc---cccHHHHHHHHHhCCceEEEeCCCceeccCCCc
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF---RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 166 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~---~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~ 166 (738)
....+...+++..+...+...+...+....++...+..+..... ..+ .+.|+.+|++|.|||++|.-+...
T Consensus 74 ~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~l~~~~ipVv~g~~~~~~----- 147 (242)
T PF00696_consen 74 ITMAAAAELNRDALLDEIVSAGERLGAHAVGLSLSDGGISAAKRDAREVD-KEAIRELLEQGIIPVVSGFAGIDD----- 147 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTHHEEEHHHTGGTEEEEEEESSEEH-HHHHHHHHHTTSEEEEESEEEEET-----
T ss_pred HHHHHhhccccchhHHHHHHhhhhhhHHHHhhhhhcccchhhhhhhhhhH-HHHHHHHHHCCCEEEEeCCcccCC-----
Confidence 00111222333223334556676777665544333322221111 123 788999999999999976211111
Q ss_pred ccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccch
Q 004665 167 EVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKH 245 (738)
Q Consensus 167 ~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~ 245 (738)
.|. + + ....+++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+
T Consensus 148 ---------~g~--~---------~-~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~ 206 (242)
T PF00696_consen 148 ---------DGE--V---------T-TLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEA 206 (242)
T ss_dssp ---------TST--E---------E-EEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHH
T ss_pred ---------CCC--c---------c-cCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHH
Confidence 110 0 0 00139999999999999999999999999999999996 699999999999999
Q ss_pred HHHHhcCCCCccccCchHHHHHHHHHHHHc-CCcEEEEe
Q 004665 246 QAEITFGDKSRVGRGGMTAKVNAAYCAACA-GIPVVITS 283 (738)
Q Consensus 246 ~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~-gi~v~I~~ 283 (738)
.++.. ...+++|||.+|+.+|..++++ +++|+|+|
T Consensus 207 ~~l~~---~~~~~~~gm~~k~~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 207 EELAS---KSGDVTGGMKPKHPAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp HHHHH---HTTSSTTTHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHh---cCCCCCCCHHHHHHHHHHHHHcCCCcEEEeC
Confidence 96553 2468899999999999999887 66899986
No 179
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=99.93 E-value=1.7e-25 Score=229.91 Aligned_cols=207 Identities=21% Similarity=0.284 Sum_probs=161.8
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHHH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (738)
++||||||+++.+. +.+..++++|+.+ +.|+++||||||++.+++..++.. .+
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~--------------------~~ 53 (227)
T cd04234 1 MVVQKFGGTSVASA------ERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA--------------------LL 53 (227)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH--------------------HH
Confidence 47999999999764 3689999999999 889999999999988887544321 45
Q ss_pred HHhhhHHHHHHHHHHhhcCCCceeEE-----EecCCCC-CcccccccHHHHHHHHHhC-CceEEEeCCCceeccCCCccc
Q 004665 96 AAVGQSSLMALYDTLFSQLDVTSSQL-----LVTDSDF-RDEDFRKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 96 ~~~g~~~~~~~~~~~l~~~gi~~~~~-----~~~~~d~-~~~~~~~~~~~~i~~lL~~-g~iPVi~g~~~v~~~~~~~~~ 168 (738)
.++|+...+.++...|.+.|+++..+ .++..++ .....+....+.|+.+|+. |.|||++|.- ..
T Consensus 54 ~s~Ge~~~~~l~~~~l~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~i--~~------- 124 (227)
T cd04234 54 LSFGERLSARLLAAALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFI--GR------- 124 (227)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEeCHHHCCEEcCCccchhhHHHHHHHHHHHHHhhCCCEEEecCce--ec-------
Confidence 67899888888999999999988643 3443443 1112222237889999999 9999997621 11
Q ss_pred ccccccccccccccccccccccCCCce-----ecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeec
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGI-----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR 242 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~-----~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~ 242 (738)
+++|. +.++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|+++++
T Consensus 125 ----------------------~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~ 182 (227)
T cd04234 125 ----------------------NEDGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISY 182 (227)
T ss_pred ----------------------CCCCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCH
Confidence 11111 14799999999999999999999999999999995 789999999999
Q ss_pred cchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccch
Q 004665 243 AKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 288 (738)
Q Consensus 243 ~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 288 (738)
+|+.++... +.++| |++++..+.++|++++|.|++.|+
T Consensus 183 ~e~~~l~~~------G~~~~--~~~a~~~a~~~~i~i~i~~~~~~~ 220 (227)
T cd04234 183 DEALELAYF------GAKVL--HPRAVEPARKANIPIRVKNTFNPE 220 (227)
T ss_pred HHHHHHHhC------Ccccc--CHHHHHHHHHcCCeEEEEeCCCCC
Confidence 999754432 24555 688999999999999999998875
No 180
>PRK12354 carbamate kinase; Reviewed
Probab=99.93 E-value=6.4e-25 Score=230.17 Aligned_cols=246 Identities=24% Similarity=0.285 Sum_probs=163.3
Q ss_pred CeEEEEECccceecCCC--ccc--HHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhc--ccccccCCcccccCccc
Q 004665 15 KRLVVKVGTAVVTRSDG--RLA--LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLR--YRKLVNSSLADLQKPQN 88 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~--~~~--~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~--~~~~~~~~~~~~~~~~~ 88 (738)
+++|||||||+|.+++. +.+ .+++...++.|+.+.+ |+++||+||+|||+|...++ .+.....-+.+.-.
T Consensus 1 ~~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~~~~~~pl~~~~--- 76 (307)
T PRK12354 1 MRIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYKDVTPYPLDVLG--- 76 (307)
T ss_pred CeEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhcCCCCCCcchhc---
Confidence 47999999999998765 344 5689999999999998 99999999999999953332 22211111111111
Q ss_pred cchHHHHHHhhhHHHH--HHHHHHhhcCCCc--eeEEEecCCC--CCccc------------------------------
Q 004665 89 ELDGKACAAVGQSSLM--ALYDTLFSQLDVT--SSQLLVTDSD--FRDED------------------------------ 132 (738)
Q Consensus 89 ~l~~~~~~~~g~~~~~--~~~~~~l~~~gi~--~~~~~~~~~d--~~~~~------------------------------ 132 (738)
+.+.|..+.+ ..+.+.|....+. ..|..+...| |.++.
T Consensus 77 ------a~sqg~iGy~l~q~l~~~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~g~ 150 (307)
T PRK12354 77 ------AETEGMIGYMLEQELGNLLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGDYF 150 (307)
T ss_pred ------ccccchHHHHHHHHHHHHhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCCce
Confidence 1111222211 1233444332222 1233332221 22110
Q ss_pred ----------ccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCc--eecchh
Q 004665 133 ----------FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG--IFWDND 200 (738)
Q Consensus 133 ----------~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g--~~i~~D 200 (738)
...+ .+.|+.||++|+|||..|++.+.. . +.+ .|. -.+ .++|+|
T Consensus 151 rrVv~SP~P~~ive-~~~I~~Ll~~g~ivIa~GGGGIPV-----~--~~~---~~~-------------~~gv~aViD~D 206 (307)
T PRK12354 151 RRVVPSPRPKRIVE-IRPIRWLLEKGHLVICAGGGGIPV-----V--YDA---DGK-------------LHGVEAVIDKD 206 (307)
T ss_pred EEEecCCCCcceeC-HHHHHHHHHCCCEEEEeCCCccCe-----E--ecC---CCc-------------eeeeeecCCcc
Confidence 0123 889999999999877765433322 0 000 000 011 258999
Q ss_pred hHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCc-E
Q 004665 201 SLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-V 279 (738)
Q Consensus 201 ~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~-v 279 (738)
.+|++||.+|+||+|+|+|||||||+++ .+|++++|++++.+|+.+. .+++|||.+|+++|..++++|.. +
T Consensus 207 ~~Aa~LA~~l~Ad~LiiLTdVdGVy~~~-~~p~~k~i~~it~~e~~~~-------~f~~GgM~pKV~AA~~~~~~gg~~v 278 (307)
T PRK12354 207 LAAALLAEQLDADLLLILTDVDAVYLDW-GKPTQRAIAQATPDELREL-------GFAAGSMGPKVEAACEFVRATGKIA 278 (307)
T ss_pred HHHHHHHHHcCCCEEEEEeCCcceecCC-CCCCCeECCCCCHHHHHhh-------CCCcCChHHHHHHHHHHHHhCCCEE
Confidence 9999999999999999999999999974 4688899999999888743 35799999999999998887664 8
Q ss_pred EEEeCccchhHHHhhcCceeEEEEccC
Q 004665 280 VITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 280 ~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
+|.+ ++.+.+++.|+ .||++..+
T Consensus 279 iI~~---~~~l~~al~G~-~GT~I~~~ 301 (307)
T PRK12354 279 GIGS---LEDIQAILAGE-AGTRISPE 301 (307)
T ss_pred EECC---HHHHHHHHCCC-CceEEecC
Confidence 8854 66788888887 79999765
No 181
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=99.93 E-value=5.5e-25 Score=228.46 Aligned_cols=218 Identities=17% Similarity=0.240 Sum_probs=160.9
Q ss_pred EEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcC-----ChhhhhHHHhcccccccCCcccccCccccch
Q 004665 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS-----GAVGVGRQRLRYRKLVNSSLADLQKPQNELD 91 (738)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~G-----Gg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~ 91 (738)
+|||||||+++++. .+.+++++|+.+.+.|+++||||| |++.+.....+..... +.+ +... .
T Consensus 2 ~ViK~GGs~l~~~~------~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~--~~~-~t~~----~ 68 (244)
T cd04260 2 IVQKFGGTSVSTKE------RREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE--NSD-ISPR----E 68 (244)
T ss_pred EEEEECchhcCCHH------HHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh--cCC-CCHH----H
Confidence 79999999998754 478999999999999999877774 4444443222221110 111 1111 1
Q ss_pred HHHHHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCccc-ccccHHHHHHHHHhCCceEEEeCCCceeccCC
Q 004665 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDED-FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (738)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~~~-~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~ 164 (738)
.+.+.++|+...+.++...|+++|+++.++ +++..++.+.. ...+ .+.++.+|+.|.|||++|. . ..
T Consensus 69 ~~~~~~~Ge~~~~~~~~~~l~~~Gi~a~~l~~~~~~lit~~~~~~~~v~~~~-~~~l~~ll~~g~VPVv~g~-~-~~--- 142 (244)
T cd04260 69 LDLLMSCGEIISAVVLTSTLRAQGLKAVALTGAQAGILTDDNYSNAKIIKVN-PKKILSALKEGDVVVVAGF-Q-GV--- 142 (244)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhCCCCeEEechHHcCEEecCCCCceeeeccC-HHHHHHHHhCCCEEEecCC-c-cc---
Confidence 245677898888878999999999998887 34555554322 2345 6789999999999999762 1 11
Q ss_pred CcccccccccccccccccccccccccCCCce-----ecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccc
Q 004665 165 PYEVTHKDTSLENYLKPFRSSFLCFYDSSGI-----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIH 238 (738)
Q Consensus 165 ~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~-----~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~ 238 (738)
+++|. +.++|++|+.+|.+|+|++|+|+|||||||++||+ ++++++|+
T Consensus 143 --------------------------~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~ 196 (244)
T cd04260 143 --------------------------TEDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILD 196 (244)
T ss_pred --------------------------CCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcc
Confidence 11111 14799999999999999999999999999999995 78999999
Q ss_pred eeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccc
Q 004665 239 TYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAM 287 (738)
Q Consensus 239 ~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~ 287 (738)
+|+++|+.+++..|.+ ..|.+++..+.+++++++|.|+++|
T Consensus 197 ~i~~~e~~~l~~~g~~--------v~~~~a~~~~~~~~i~v~I~~~~~~ 237 (244)
T cd04260 197 VVSYNEVFQMAHQGAK--------VIHPRAVEIAMQANIPIRIRSTMSE 237 (244)
T ss_pred cCCHHHHHHHHHcCch--------hcCHHHHHHHHHcCCeEEEecCCCC
Confidence 9999998866544332 3577888999999999999999876
No 182
>PRK14557 pyrH uridylate kinase; Provisional
Probab=99.93 E-value=3.5e-24 Score=221.33 Aligned_cols=234 Identities=17% Similarity=0.222 Sum_probs=164.1
Q ss_pred ccCCeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhh-hHHHhcccccccCCcccccCcccc
Q 004665 12 KDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQNE 89 (738)
Q Consensus 12 ~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~-g~~~l~~~~~~~~~~~~~~~~~~~ 89 (738)
.+++++||||||++|.++++ +++.+++.+++++|+.+.+.|++++||||||..+ |+. .+.... +...
T Consensus 2 ~~~~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~-a~~~~~--------~~~~-- 70 (247)
T PRK14557 2 RPYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHL-AEEWGI--------DRVE-- 70 (247)
T ss_pred CcccEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHH-HHhcCC--------ChHH--
Confidence 45789999999999987654 5888999999999999999999999999997533 442 222211 1110
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcC-CCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccc
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQL-DVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~-gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~ 168 (738)
...+.+.|...-..++...|... +..+ . .+++..+........ ...+..+|++|.|||+.|. .
T Consensus 71 --~D~ig~~g~~lna~ll~~~l~~~~~~~~-~-i~t~~~~~~~~~~~~-~~~~~~~l~~g~VvV~~G~----~------- 134 (247)
T PRK14557 71 --ADNIGTLGTIINSLMLRGVLTSKTNKEV-R-VMTSIPFNAVAEPYI-RLRAVHHLDNGYIVIFGGG----N------- 134 (247)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhhhCCce-e-EEeccccccccchhh-HHHHHHHHhCCCEEEEECC----c-------
Confidence 01222223222222344555543 3332 1 233333332111111 3346677999999999651 0
Q ss_pred ccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEee-ccccccccCCcc-cCCccccceeeccchH
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLL-SDVEGLYSGPPS-EPNSKLIHTYIRAKHQ 246 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~-TdV~GV~~~dP~-~~~a~~i~~i~~~e~~ 246 (738)
+.| ++++|++|+++|.+++||.|+++ |||||||++||+ +|++++|+++++.|+.
T Consensus 135 ----------g~~--------------~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~ 190 (247)
T PRK14557 135 ----------GQP--------------FVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVV 190 (247)
T ss_pred ----------CCC--------------ccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhc
Confidence 111 38899999999999999999999 599999999994 9999999999988764
Q ss_pred HHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccCC
Q 004665 247 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDA 307 (738)
Q Consensus 247 ~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~~ 307 (738)
. .+ ..-| ..+++..|.++|++++|+||+.|+.+.++++|+..||++.+..
T Consensus 191 ~---~~------~~~~--~~~A~~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~~~ 240 (247)
T PRK14557 191 R---QN------IQVM--DQAALLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDDA 240 (247)
T ss_pred c---cC------HHHH--HHHHHHHHHHCCCcEEEEeCCCChHHHHHHcCCCCcEEEecCc
Confidence 1 11 1123 3467888899999999999999999999999999999998763
No 183
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=99.92 E-value=3.2e-24 Score=219.78 Aligned_cols=218 Identities=20% Similarity=0.270 Sum_probs=156.0
Q ss_pred EEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHHHH
Q 004665 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACA 96 (738)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (738)
+|||||||+|++++ +.+.+.+++++|+++.++ ++++||||||... +.+++...... +... .+......
T Consensus 1 iViKlGGs~l~~~~---~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~a-~~~~~~~~~~~-----~~~~--~~~~~g~~ 68 (221)
T TIGR02076 1 IVISLGGSVLSPEI---DAEFIKEFANILRKLSDE-HKVGVVVGGGKTA-RRYIGVARELG-----ASET--FLDEIGID 68 (221)
T ss_pred CEEEechhhcCCCC---CHHHHHHHHHHHHHHHhC-CeEEEEECCcHHH-HHHHHHHHHcC-----CCHH--HHHHhhhH
Confidence 58999999999864 678899999999999876 8999999887654 33333322111 1100 00000011
Q ss_pred HhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccccccccccc
Q 004665 97 AVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLE 176 (738)
Q Consensus 97 ~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~ 176 (738)
+...-..++..+|...+++... .+ ......+|+.|.+||++|. . +
T Consensus 69 --~~~ln~~~l~~ll~~~~~~~~~--------------~~-~~~~~~~l~~g~ipv~~G~-~--~--------------- 113 (221)
T TIGR02076 69 --ATRLNAMLLIAALGDDAYPKVP--------------EN-FEEALEAMSLGKIVVMGGT-H--P--------------- 113 (221)
T ss_pred --HHHHHHHHHHHHHHhcCCCCcC--------------CC-HHHHHHHHHcCCEEEEcCC-C--C---------------
Confidence 1111111244555555554311 11 2334678889999999761 1 1
Q ss_pred ccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCC
Q 004665 177 NYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKS 255 (738)
Q Consensus 177 g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~ 255 (738)
.+++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++++++|+.+.... .
T Consensus 114 -------------------~~s~D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~---~ 171 (221)
T TIGR02076 114 -------------------GHTTDAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGS---S 171 (221)
T ss_pred -------------------CCCcHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcC---C
Confidence 17889999999999999999999999999999995 899999999999887753321 2
Q ss_pred ccccC-chHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 256 RVGRG-GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 256 ~~~~g-gM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
...+| +|..|+.++..+.+.|++|+|+||+.|+.+.+++.|+..||.+
T Consensus 172 ~~~~g~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~g~~~GT~i 220 (221)
T TIGR02076 172 SVKAGSNEVVDPLAAKIIERSKIRTIVVNGRDPENLEKVLKGEHVGTII 220 (221)
T ss_pred CccCCCCceeHHHHHHHHHHCCCcEEEECCCCccHHHHHHCCCCCCeEe
Confidence 34456 5777889889999999999999999999999999998889986
No 184
>PLN02825 amino-acid N-acetyltransferase
Probab=99.92 E-value=3.5e-24 Score=240.62 Aligned_cols=246 Identities=18% Similarity=0.215 Sum_probs=174.2
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHH--HhcccccccCCcccccCccccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQ--RLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~--~l~~~~~~~~~~~~~~~~~~~l 90 (738)
.++++|||+||+++.+.. +.+++.+|+.|+..|.++|||||||++++.. ..+....+..+.+.++...+++
T Consensus 16 rgktfVIk~gG~~l~~~~-------~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~~~gi~~~f~~G~RVTd~~~L~~ 88 (515)
T PLN02825 16 RGSTFVVVISGEVVAGPH-------LDNILQDISLLHGLGIKFVLVPGTHVQIDKLLAERGREPKYVGAYRITDSAALQA 88 (515)
T ss_pred CCCEEEEEECchhhcCch-------HHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHHHcCCCceeeCCcccCCHHHHHH
Confidence 568999999999998754 8999999999999999999999999999974 2233333333445455544444
Q ss_pred hHHHHHHhhhHHHH--HHH-----HHHhhcCCCce----eEEEecCC--------------CCC--cccccccHHHHHHH
Q 004665 91 DGKACAAVGQSSLM--ALY-----DTLFSQLDVTS----SQLLVTDS--------------DFR--DEDFRKQLYDTVQS 143 (738)
Q Consensus 91 ~~~~~~~~g~~~~~--~~~-----~~~l~~~gi~~----~~~~~~~~--------------d~~--~~~~~~~~~~~i~~ 143 (738)
. ..+.|+.... +.+ ...|+++|.++ ..+...++ |+. ...+.+| .+.|+.
T Consensus 89 ~---~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd-~~~i~~ 164 (515)
T PLN02825 89 S---MEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKID-VSRIKE 164 (515)
T ss_pred H---HHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEc-HHHHHH
Confidence 2 2233443322 111 12356666665 34433322 222 2344566 999999
Q ss_pred HHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCcee-cchhhHHHHHHhhcCCCEEEeecccc
Q 004665 144 LLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIF-WDNDSLAGLLALELKADLLVLLSDVE 222 (738)
Q Consensus 144 lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~-i~~D~~A~~lA~~L~A~~li~~TdV~ 222 (738)
+|++|.|||+ +|. | +|++|+ .| +|+|.+|+.+|.+|+|+||||+||++
T Consensus 165 ~L~~g~Ipvi------spl----g-----~s~~Ge----------------~~NinaD~vA~avA~aL~A~KLI~ltd~~ 213 (515)
T PLN02825 165 RLDSNCIVLL------SNL----G-----YSSSGE----------------VLNCNTYEVATACALAIGADKLICIVDGP 213 (515)
T ss_pred HHhCCCeEEE------CCc----e-----ECCCCC----------------EEeeCHHHHHHHHHHHcCCCeEEEEeCcc
Confidence 9999999999 442 2 133331 23 99999999999999999999999977
Q ss_pred ccccCCcccCCccccceeeccchHHHHhcCC-------C-----------------------------------------
Q 004665 223 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGD-------K----------------------------------------- 254 (738)
Q Consensus 223 GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~-------~----------------------------------------- 254 (738)
+++. ++++|++|+.+|+.+++..++ .
T Consensus 214 -~~~~-----~g~li~~l~~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (515)
T PLN02825 214 -ILDE-----NGRLIRFMTLEEADMLIRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSF 287 (515)
T ss_pred -eecC-----CCCCcCcCCHHHHHHHHHhhhhcchhhhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 5544 378999999999887665310 0
Q ss_pred -------C--------cc---------ccCchHHHHHHHHHHHHcCCc-EEEEeCccchhHH-HhhcCceeEEEEccC
Q 004665 255 -------S--------RV---------GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSII-KVLEGKRVGTLFHRD 306 (738)
Q Consensus 255 -------~--------~~---------~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~i~-~~~tg~~iGTvi~~~ 306 (738)
. ++ .+.+...|+.+|..||+.||+ ||++|++.++.++ ++|+.+.+||++..+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~ 365 (515)
T PLN02825 288 QNGVGFDNGNGLSGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASD 365 (515)
T ss_pred cccccccCcccccccccccccchhhchhhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccC
Confidence 0 00 111234469999999999998 9999999999987 499999999999877
No 185
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=99.92 E-value=4.8e-24 Score=218.35 Aligned_cols=217 Identities=21% Similarity=0.292 Sum_probs=154.3
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHHH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (738)
++|||||||++++++ +.+.+.+++++|+++.. |++++||||||. +.+.+...+.... .... .+.....
T Consensus 1 ~iViKlGGs~l~~~~---~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~-~a~~~~~~~~~~~-----~~~~--~~d~~g~ 68 (221)
T cd04253 1 RIVISLGGSVLAPEK---DADFIKEYANVLRKISD-GHKVAVVVGGGR-LAREYISVARKLG-----ASEA--FLDEIGI 68 (221)
T ss_pred CEEEEeccceeCCCC---ChHHHHHHHHHHHHHhC-CCEEEEEECCCH-HHHHHHHHHHHcC-----CCHH--HHHHhcC
Confidence 589999999997753 67889999999998876 789999998886 4554333222110 1100 0000011
Q ss_pred HHhhhHHHHH-HHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccccccccc
Q 004665 96 AAVGQSSLMA-LYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTS 174 (738)
Q Consensus 96 ~~~g~~~~~~-~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~ 174 (738)
... .+.. ++...+ ..|+++..+ + .+.+..+|+.|.|||++|. . +
T Consensus 69 ~~~---~ln~~~~~~~l-~~~~~~~~~--------------~-~~~~~~~l~~g~vpv~~G~-~--~------------- 113 (221)
T cd04253 69 MAT---RLNARLLIAAL-GDAYPPVPT--------------S-YEEALEAMFTGKIVVMGGT-E--P------------- 113 (221)
T ss_pred HHH---HHHHHHHHHHH-hcCCCcCCC--------------C-HHHHHHHHHcCCeEEEECC-C--C-------------
Confidence 111 1111 123333 355542111 2 4556789999999999762 0 1
Q ss_pred ccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCC
Q 004665 175 LENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGD 253 (738)
Q Consensus 175 ~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~ 253 (738)
.+++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++++++|+.+.... .
T Consensus 114 ---------------------~~s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~-~ 171 (221)
T cd04253 114 ---------------------GQSTDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGK-S 171 (221)
T ss_pred ---------------------CCccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccC-C
Confidence 16789999999999999999999999999999995 899999999999887743321 1
Q ss_pred CCccccCc-hHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEE
Q 004665 254 KSRVGRGG-MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 303 (738)
Q Consensus 254 ~~~~~~gg-M~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi 303 (738)
....|+ |..|+.++..+.++|++++|+||+.|+.+.++++|+..||.+
T Consensus 172 --~~~~g~~~~~d~~a~~~~~~~gi~~~I~~g~~p~~l~~~l~g~~~GT~I 220 (221)
T cd04253 172 --SWKAGSNEPFDPLAAKIIERSGIKTIVVDGRDPENLERALKGEFVGTII 220 (221)
T ss_pred --CcCCCCCcchHHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCCCeEe
Confidence 122343 567889999999999999999999999999999998889986
No 186
>PRK08841 aspartate kinase; Validated
Probab=99.92 E-value=9.6e-24 Score=232.40 Aligned_cols=225 Identities=21% Similarity=0.262 Sum_probs=167.4
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHH
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 94 (738)
+++|+||||+++.+.. .+..++++|+.+.+.|.++||||||++..+...++..... ...... -..++
T Consensus 2 ~~~V~KfGGtsv~~~~------~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~----~~~~~~---~~~d~ 68 (392)
T PRK08841 2 PLIVQKFGGTSVGSIE------RIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQV----DSVPTA---RELDV 68 (392)
T ss_pred CeEEEeECcccCCCHH------HHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhh----ccCCCH---HHHHH
Confidence 4799999999997743 6899999999999999999999999886776554533221 111111 12357
Q ss_pred HHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCc-ccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcc
Q 004665 95 CAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (738)
Q Consensus 95 ~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~-~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~ 167 (738)
+.+.|+...+.++...|.+.|+++..+ ++++..+.+ .....+ .+.|..+++.|.|||+.|.-+...
T Consensus 69 l~s~GE~~s~~lla~~L~~~Gi~a~~l~~~~~~i~t~~~~~~~~i~~~~-~~~i~~ll~~~~vpVv~Gf~g~~~------ 141 (392)
T PRK08841 69 LLSAGEQVSMALLAMTLNKLGYAARSLTGAQANIVTDNQHNDATIKHID-TSTITELLEQDQIVIVAGFQGRNE------ 141 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEehhHcCEEecCCCCCceechhh-HHHHHHHHhCCCEEEEeCCcccCC------
Confidence 788899888888999999999976554 233333322 112233 688999999999999976211000
Q ss_pred cccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchH
Q 004665 168 VTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQ 246 (738)
Q Consensus 168 ~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~ 246 (738)
.|. . ++ -|+ .++|++|+.+|.+|+|+.|+++|||||||++||+ +|++++|++|+++|+.
T Consensus 142 --------~g~--~------tt---lgr-ggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ 201 (392)
T PRK08841 142 --------NGD--I------TT---LGR-GGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSME 201 (392)
T ss_pred --------CCC--E------EE---eCC-CChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHH
Confidence 010 0 00 011 5899999999999999999999999999999995 8999999999999988
Q ss_pred HHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccc
Q 004665 247 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAM 287 (738)
Q Consensus 247 ~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~ 287 (738)
++.. .|.+.-+.+++..+.++|||++|.|++.+
T Consensus 202 ela~--------~Ga~vlhp~ai~~a~~~~Ipi~i~n~~~~ 234 (392)
T PRK08841 202 AMAR--------KGAKVLHLPSVQHAWKHSVPLRVLSSFEV 234 (392)
T ss_pred HHHh--------cCccccCHHHHHHHHHCCCeEEEEecCCC
Confidence 5433 35567788999999999999999998765
No 187
>PRK09411 carbamate kinase; Reviewed
Probab=99.91 E-value=2.3e-23 Score=216.46 Aligned_cols=240 Identities=22% Similarity=0.277 Sum_probs=167.1
Q ss_pred CeEEEEECccceecCCC--c--ccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccc
Q 004665 15 KRLVVKVGTAVVTRSDG--R--LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~--~--~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l 90 (738)
+++||.+||++|...+. + .+..++...++.|+.|.++ |++||+||.|||+|...++...... .+ .+.|
T Consensus 2 ~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~~-----~~--~~pl 73 (297)
T PRK09411 2 KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWKE-----VE--PYPL 73 (297)
T ss_pred CeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhcC-----CC--CCCc
Confidence 58999999999977544 3 3455899999999999987 9999999999999986554322111 11 1111
Q ss_pred hHHHHHHhhhHHHHHHHHHHhhcCCCce------eEEEecCCC--CCcc---------------------------c---
Q 004665 91 DGKACAAVGQSSLMALYDTLFSQLDVTS------SQLLVTDSD--FRDE---------------------------D--- 132 (738)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~l~~~gi~~------~~~~~~~~d--~~~~---------------------------~--- 132 (738)
..-.+.+-|..+.+ +++.|.+.++.. .|+.+...| |.++ +
T Consensus 74 d~~~a~sqG~iGy~--l~q~l~~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~~~dg~g~ 151 (297)
T PRK09411 74 DVLVAESQGMIGYM--LAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYL 151 (297)
T ss_pred hhhhhhcccHHHHH--HHHHHHHcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEEEecCCce
Confidence 11122333444443 567776666431 222222111 2211 0
Q ss_pred ----------ccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCc--eecchh
Q 004665 133 ----------FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG--IFWDND 200 (738)
Q Consensus 133 ----------~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g--~~i~~D 200 (738)
...+ .+.|+.||++|.|||..|...+.. .. +.+| .++|+|
T Consensus 152 rrVVpSP~P~~iVe-~~~I~~Ll~~G~IVI~~gGGGIPV-----~~----------------------~~~G~e~vIDkD 203 (297)
T PRK09411 152 RRVVASPQPRKILD-SEAIELLLKEGHVVICSGGGGVPV-----TE----------------------DGAGSEAVIDKD 203 (297)
T ss_pred EEEccCCCCcceEC-HHHHHHHHHCCCEEEecCCCCCCe-----EE----------------------cCCCeEEecCHH
Confidence 1123 899999999999988865322221 10 1112 259999
Q ss_pred hHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcC-CcE
Q 004665 201 SLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPV 279 (738)
Q Consensus 201 ~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~g-i~v 279 (738)
.+|+.||.+|+||+|+|+|||||||+++ .+|++++|++++.+|+.+++. .+|||.||+++|..+++.+ .++
T Consensus 204 ~~Aa~LA~~L~Ad~LIiLTDVdGV~~n~-~~p~~~~I~~it~~e~~~~~~-------~~GgM~pKVeAA~~~v~~~g~~a 275 (297)
T PRK09411 204 LAAALLAEQINADGLVILTDADAVYENW-GTPQQRAIRHATPDELAPFAK-------ADGAMGPKVTAVSGYVRSRGKPA 275 (297)
T ss_pred HHHHHHHHHhCCCEEEEEeCchhhccCC-CCCCCcCCCCcCHHHHHHhcc-------CCCCcHHHHHHHHHHHHhCCCeE
Confidence 9999999999999999999999999874 578889999999998864432 4899999999999988875 558
Q ss_pred EEEeCccchhHHHhhcCceeEEEEc
Q 004665 280 VITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 280 ~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
+|.+ ++.+.+++.|+ .||.+.
T Consensus 276 ~I~~---l~~~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 276 WIGA---LSRIEETLAGE-AGTCIS 296 (297)
T ss_pred EECC---hhHHHHHHCCC-CCeEEe
Confidence 8865 67777888887 699874
No 188
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases.
Probab=99.91 E-value=9.8e-24 Score=235.24 Aligned_cols=235 Identities=21% Similarity=0.272 Sum_probs=172.2
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccc-ccCCcccccCccccchHH
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKL-VNSSLADLQKPQNELDGK 93 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~-~~~~~~~~~~~~~~l~~~ 93 (738)
+++|+||||+++.+. +.+.+++++|+.+.+.|++++|||||++.++..+.+.... .. . .... ...+
T Consensus 1 ~~iViK~GGs~~~~~------~~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~~~-~--~~~~----~~~~ 67 (401)
T TIGR00656 1 ELIVQKFGGTSVGSG------ERIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKAIR-D--AITP----RERD 67 (401)
T ss_pred CcEEEEECCcCcCCH------HHHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHHhc-c--CCCh----HHHH
Confidence 368999999999864 3689999999999999999999999998888764443311 10 0 0111 1123
Q ss_pred HHHHhhhHHHHHHHHHHhhcCCCceeEEE------ecCCCCCcc-cccccHHHHHHHHHhCCceEEEeCCCceeccCCCc
Q 004665 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSDFRDE-DFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 166 (738)
Q Consensus 94 ~~~~~g~~~~~~~~~~~l~~~gi~~~~~~------~~~~d~~~~-~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~ 166 (738)
.+.+.|+...+.++...|.++|+++.++. ++...+.+. ....+..+.++.+++.|.|||++|.-+...
T Consensus 68 ~i~~~Ge~~s~~~~~~~l~~~g~~a~~l~~~~~~~~t~~~~~~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~~~~----- 142 (401)
T TIGR00656 68 ELVSHGERLSSALFSGALRDLGVKAIWLDGGEAGIITDDNFGNAKIDIIATEERLLPLLEEGIIVVVAGFQGATE----- 142 (401)
T ss_pred HHhhHHHHHHHHHHHHHHHhCCCceEEeccccceEEeCCCCCceEeeecchHHHHHHHHhCCCEEEecCcceeCC-----
Confidence 56677887767788999999999988763 333333321 122332388999999999999976211000
Q ss_pred ccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccch
Q 004665 167 EVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKH 245 (738)
Q Consensus 167 ~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~ 245 (738)
.| ..+ ..| ..++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+
T Consensus 143 ---------~g--~~~---------~lg-rg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea 201 (401)
T TIGR00656 143 ---------KG--YTT---------TLG-RGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEA 201 (401)
T ss_pred ---------CC--CEe---------ecC-CCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHH
Confidence 01 000 001 15899999999999999999999999999999995 799999999999999
Q ss_pred HHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 246 QAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 246 ~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
.++..+| ...-+.+++..|.++++|++|.|++.|+ .||++..+
T Consensus 202 ~~l~~~G--------~~v~~~~a~~~a~~~~i~i~i~~~~~~~----------~gT~I~~~ 244 (401)
T TIGR00656 202 LELATFG--------AKVLHPRTVEPAMRSGVPIEVRSSFDPE----------EGTLITNS 244 (401)
T ss_pred HHHHHcC--------CcccCHHHHHHHHHCCCeEEEEECCCCC----------CCeEEEeC
Confidence 9665433 3356788999999999999999998874 37877643
No 189
>PRK06635 aspartate kinase; Reviewed
Probab=99.91 E-value=2.4e-23 Score=232.41 Aligned_cols=235 Identities=21% Similarity=0.264 Sum_probs=169.1
Q ss_pred CCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHH
Q 004665 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (738)
++++||||||+++.+. +.+.+++++|+.+.+.|+++||||||++..+...++..+... .. .+. -..+
T Consensus 1 m~~iViK~GGs~l~~~------~~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~-~~--~~~----~~~~ 67 (404)
T PRK06635 1 MALIVQKFGGTSVGDV------ERIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVS-PL--PDP----RELD 67 (404)
T ss_pred CCeEEEeECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhc-cC--CCH----HHHH
Confidence 3589999999999764 468999999999999999999988876555554444332211 00 011 1224
Q ss_pred HHHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCcc-cccccHHHHHHHHHhCCceEEEeCCCceeccCCCc
Q 004665 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDE-DFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 166 (738)
Q Consensus 94 ~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~~-~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~ 166 (738)
++.++|+...+.++...|.+.|+++..+ ++++.+|.+. ....+ .+.|+.+|+.|.|||++|.-+...
T Consensus 68 ~~~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~ipVi~g~~~~~~----- 141 (404)
T PRK06635 68 MLLSTGEQVSVALLAMALQSLGVKARSFTGWQAGIITDSAHGKARITDID-PSRIREALDEGDVVVVAGFQGVDE----- 141 (404)
T ss_pred HHhhhhHHHHHHHHHHHHHhCCCCeEEeChhhCCEEecCCCCceEeeecC-HHHHHHHHhCCCEEEecCccEeCC-----
Confidence 6677888777777899999999987443 3343444332 12334 788999999999999976311111
Q ss_pred ccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccch
Q 004665 167 EVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKH 245 (738)
Q Consensus 167 ~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~ 245 (738)
.| .. ++. | ..++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++++++|+
T Consensus 142 ---------~g--~~------~~l---~-rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~ 200 (404)
T PRK06635 142 ---------DG--EI------TTL---G-RGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEM 200 (404)
T ss_pred ---------CC--CE------Eec---C-CCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHH
Confidence 01 00 000 1 15899999999999999999999999999999995 799999999999998
Q ss_pred HHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 246 QAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 246 ~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
.++... |.+..|.+++..+.++|++++|.|++.+. .||++...
T Consensus 201 ~~l~~~--------g~~~~~~~a~~~~~~~~i~~~i~~~~~~~----------~gT~i~~~ 243 (404)
T PRK06635 201 LELASL--------GAKVLHPRSVEYAKKYNVPLRVRSSFSDN----------PGTLITGE 243 (404)
T ss_pred HHHHHc--------CCcccCHHHHHHHHHcCceEEEEcCCCCC----------CCCEEeeC
Confidence 865432 34456778889999999999999987542 48887654
No 190
>PRK04531 acetylglutamate kinase; Provisional
Probab=99.90 E-value=6.2e-23 Score=225.21 Aligned_cols=208 Identities=23% Similarity=0.213 Sum_probs=151.6
Q ss_pred CCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccc---cCCcccccCccccc
Q 004665 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV---NSSLADLQKPQNEL 90 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~---~~~~~~~~~~~~~l 90 (738)
++++|||+||+++.+. +..++++|+.|...|.++|||||||++++.. +...... ..+.+.++...++.
T Consensus 36 ~~~~VIKiGG~~l~~~--------~~~l~~dla~L~~~G~~~VlVHGggpqI~~~-l~~~gie~~~v~G~RVTd~~tl~v 106 (398)
T PRK04531 36 ERFAVIKVGGAVLRDD--------LEALASSLSFLQEVGLTPIVVHGAGPQLDAE-LDAAGIEKETVNGLRVTSPEALAI 106 (398)
T ss_pred CcEEEEEEChHHhhcC--------HHHHHHHHHHHHHCCCcEEEEECCCHHHHHH-HHHcCCCcEEECCEecCCHHHHHH
Confidence 4789999999999753 5899999999999999999999999999974 3333322 22333233222211
Q ss_pred hHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCccccc
Q 004665 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTH 170 (738)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~ 170 (738)
..+ ++++.. ..+.+.|+.+|++|.|||+. |. +.
T Consensus 107 v~~---~l~~vn--------------------------------~~lv~~I~~~L~~g~IPVls------pl----g~-- 139 (398)
T PRK04531 107 VRK---VFQRSN--------------------------------LDLVEAVESSLRAGSIPVIA------SL----GE-- 139 (398)
T ss_pred HHH---HHHHHH--------------------------------HHHHHHHHHHHHCCCEEEEe------Cc----EE--
Confidence 111 111000 01133388999999999993 31 10
Q ss_pred ccccccccccccccccccccCCCce-e-cchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeecc-chHH
Q 004665 171 KDTSLENYLKPFRSSFLCFYDSSGI-F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRA-KHQA 247 (738)
Q Consensus 171 ~~~~~~g~~~p~~~~~~~~~~~~g~-~-i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~-e~~~ 247 (738)
+..|. + +|+|.+|+.+|.+|+|++|+|+|||+|||+.+ +++|++|+.+ +...
T Consensus 140 --------------------~~~G~~~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~-----g~~i~~i~~~~e~~~ 194 (398)
T PRK04531 140 --------------------TPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDAD-----GKLISSINLSTEYDH 194 (398)
T ss_pred --------------------CCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCC-----CCCcccCCHHHHHHH
Confidence 11232 3 99999999999999999999999999999753 7899999974 5554
Q ss_pred HHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHH-hhcCceeEEEEccC
Q 004665 248 EITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIK-VLEGKRVGTLFHRD 306 (738)
Q Consensus 248 ~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~-~~tg~~iGTvi~~~ 306 (738)
.+. ..+++|||++|+++|..+++..-+++++++..|+.+.. +++.+..||.+...
T Consensus 195 l~~----~~~vtgGM~~KL~~a~~al~~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g 250 (398)
T PRK04531 195 LMQ----QPWINGGMKLKLEQIKELLDRLPLESSVSITSPSDLAKELFTHKGSGTLVRRG 250 (398)
T ss_pred HHh----cCCCCccHHHHHHHHHHHHhCCCcEEEEEecCCCHHHHHHccCCCCCeEEecC
Confidence 443 35689999999999999996533488888888999876 77888899999876
No 191
>PRK08210 aspartate kinase I; Reviewed
Probab=99.90 E-value=5.2e-23 Score=229.34 Aligned_cols=234 Identities=19% Similarity=0.272 Sum_probs=167.5
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhH-----HHhcccccccCCcccccCcccc
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGR-----QRLRYRKLVNSSLADLQKPQNE 89 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~-----~~l~~~~~~~~~~~~~~~~~~~ 89 (738)
+++||||||+++++++ .+.+++++|+.+.++|++++|||||++..|+ ..++...... ......
T Consensus 2 ~~iViK~GGs~l~~~~------~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~---~~~~~~--- 69 (403)
T PRK08210 2 KIIVQKFGGTSVSTEE------RRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF---SEISKR--- 69 (403)
T ss_pred CeEEEeECCcccCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc---cCCChH---
Confidence 5899999999998764 4789999999999999999988866555543 2222111100 001111
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCcc-cccccHHHHHHHHHhCCceEEEeCCCceecc
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDE-DFRKQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~~-~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~ 162 (738)
..+.+.++|+.....++...|.+.|+++..+ +++..++.+. ....+ .+.|+.+|+.|.|||++|.-+...
T Consensus 70 -~~~~l~~~Ge~~s~~~~~~~l~~~Gi~a~~l~~~~~~~~t~~~~~~~~v~~~~-~~~l~~~l~~~~vpVi~G~~~~~~- 146 (403)
T PRK08210 70 -EQDLLMSCGEIISSVVFSNMLNENGIKAVALTGGQAGIITDDNFTNAKIIEVN-PDRILEALEEGDVVVVAGFQGVTE- 146 (403)
T ss_pred -HHHHHHhHhHHHHHHHHHHHHHhCCCCeEEechHHccEEccCCCCceeeehhh-HHHHHHHHhcCCEEEeeCeeecCC-
Confidence 1234577888777777889999999998775 3444444322 12334 788999999999999976211110
Q ss_pred CCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceee
Q 004665 163 KAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYI 241 (738)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~ 241 (738)
.| ..+ +. + ..++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+
T Consensus 147 -------------~g--~~~------~l---~-rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls 201 (403)
T PRK08210 147 -------------NG--DIT------TL---G-RGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVS 201 (403)
T ss_pred -------------CC--CEE------Ee---C-CCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccC
Confidence 01 000 00 1 14899999999999999999999999999999995 89999999999
Q ss_pred ccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 242 RAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 242 ~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
++|+.++...|.+ ..|.+++..+.++++|++|.|++.+. .||++...
T Consensus 202 ~~ea~~l~~~G~~--------v~~~~a~~~~~~~~i~i~i~~~~~~~----------~gT~I~~~ 248 (403)
T PRK08210 202 YNEVFQMAYQGAK--------VIHPRAVEIAMQANIPLRIRSTYSDS----------PGTLITSL 248 (403)
T ss_pred HHHHHHHHHCCcc--------ccCHHHHHHHHHCCCeEEEEecCCCc----------CCcEEEec
Confidence 9999866554432 34678889999999999999987542 28988754
No 192
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.9e-21 Score=196.36 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=178.5
Q ss_pred CeEEEEECccceecCCC----cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccc
Q 004665 15 KRLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~----~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l 90 (738)
+++||.+||++|-..+. ..+.+++...+++|+.|.++|+++||.||.|||+|...++...... ....+. +.|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~--~~~~p~--~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADS--EKGVPA--YPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhcc--ccCCCC--ccH
Confidence 47999999999977643 2588899999999999999999999999999999986544322100 001110 111
Q ss_pred hHHHHHHhhhHHHH--HHHHHHhhcCCCc--e----eEEEecCCC--CCcc----------------------------c
Q 004665 91 DGKACAAVGQSSLM--ALYDTLFSQLDVT--S----SQLLVTDSD--FRDE----------------------------D 132 (738)
Q Consensus 91 ~~~~~~~~g~~~~~--~~~~~~l~~~gi~--~----~~~~~~~~d--~~~~----------------------------~ 132 (738)
..-.+.+-|..+.+ ..+.+.|...++. . .|+.+...| |.++ .
T Consensus 77 d~~~AmsQG~IGy~l~qal~n~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~ 156 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRNELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAG 156 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHHHHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEEEecCC
Confidence 11122333433322 2355666666753 1 222332221 2221 1
Q ss_pred c-cccH-----------HHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCc--eecc
Q 004665 133 F-RKQL-----------YDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSG--IFWD 198 (738)
Q Consensus 133 ~-~~~~-----------~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g--~~i~ 198 (738)
+ ++++ .+.|+.|+++|.++|..|++.|...+- ..| | .| .+||
T Consensus 157 rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~----------~~~----~----------~GVeAVID 212 (312)
T COG0549 157 RGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEE----------GAG----L----------QGVEAVID 212 (312)
T ss_pred CCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCCCcceEec----------CCC----c----------ceeeEEEc
Confidence 1 1121 789999999999999988765554210 011 1 12 2599
Q ss_pred hhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCC-
Q 004665 199 NDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI- 277 (738)
Q Consensus 199 ~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi- 277 (738)
.|..+++||.+++||.|+|+||||+||-++ ..|+.+.|++++.+|+.+++.. ..+..|.|.||+++|...++++-
T Consensus 213 KDlasalLA~~i~AD~liILTdVd~Vy~n~-gkp~q~~L~~v~~~e~~~yl~e---g~Fa~GSM~PKVeAai~Fv~~~gk 288 (312)
T COG0549 213 KDLASALLAEQIDADLLIILTDVDAVYVNF-GKPNQQALDRVTVDEMEKYLAE---GQFAAGSMGPKVEAAISFVENTGK 288 (312)
T ss_pred cHHHHHHHHHHhcCCEEEEEeccchheecC-CCccchhhcccCHHHHHHHHhc---CCCCCCCccHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999876 4678889999999999988875 46889999999999999999854
Q ss_pred cEEEEeCccchhHHHhhcCceeEEEEc
Q 004665 278 PVVITSGFAMDSIIKVLEGKRVGTLFH 304 (738)
Q Consensus 278 ~v~I~~g~~~~~i~~~~tg~~iGTvi~ 304 (738)
+++|.+ .+.+.+++.|+ .||.+.
T Consensus 289 ~A~Its---Le~~~~~l~g~-~GT~I~ 311 (312)
T COG0549 289 PAIITS---LENAEAALEGK-AGTVIV 311 (312)
T ss_pred ceEECc---HHHHHHHhccC-CCcEec
Confidence 489987 77777888777 688775
No 193
>PRK07431 aspartate kinase; Provisional
Probab=99.89 E-value=5.8e-22 Score=230.91 Aligned_cols=236 Identities=21% Similarity=0.273 Sum_probs=166.5
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHH
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 94 (738)
+++|+||||+++.+ .+.++.++++|+.+.+.|+++||||||++.+...+++...... ...... ..++
T Consensus 2 ~~iViKfGGss~~~------~~~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~~~~~~~t-~~~~~~------~~~~ 68 (587)
T PRK07431 2 ALIVQKFGGTSVGS------VERIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELVKLAKEIS-SNPPRR------EMDM 68 (587)
T ss_pred CeEEEEECchhcCC------HHHHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHHHHHHHhc-cCCCHH------HHHH
Confidence 47999999999965 3468999999999999999999999965545443333221111 100111 1246
Q ss_pred HHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCc-ccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcc
Q 004665 95 CAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (738)
Q Consensus 95 ~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~-~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~ 167 (738)
+.+.|+.....+++..|.+.|+++..+ +++...+.. .....+ .+.|+.+|+.|.|||++|........
T Consensus 69 ~ls~Ge~~s~~l~~~~l~~~gi~a~~l~~~~~~~~~~~~~~~~~i~~~~-~~~l~~~l~~g~vpVv~g~~g~~~~~---- 143 (587)
T PRK07431 69 LLSTGEQVSIALLSMALHELGQPAISLTGAQVGIVTESEHGRARILEIK-TDRIQRHLDAGKVVVVAGFQGISLSS---- 143 (587)
T ss_pred HHHHhHHHHHHHHHHHHHHCCCCeEEechhHcCeEecCCCCceeeeecc-HHHHHHHHhCCCeEEecCCcCCCCCC----
Confidence 667787666667888999999986554 222222221 111223 67899999999999997621111100
Q ss_pred cccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchH
Q 004665 168 VTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQ 246 (738)
Q Consensus 168 ~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~ 246 (738)
.| ++ ...|+ .++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.
T Consensus 144 --------~g--~~---------~~lgr-ggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~ 203 (587)
T PRK07431 144 --------NL--EI---------TTLGR-GGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEML 203 (587)
T ss_pred --------CC--CE---------eecCC-CchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHH
Confidence 01 01 00122 7899999999999999999999999999999995 7999999999999998
Q ss_pred HHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 247 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 247 ~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
++..+ +.++| +++++..+.++|+|++|.|++. + ..||++..+
T Consensus 204 el~~~------G~~v~--~~~a~~~~~~~~i~i~i~~~~~-~---------~~GT~i~~~ 245 (587)
T PRK07431 204 ELASL------GASVL--HPRAVEIARNYGVPLVVRSSWS-D---------APGTLVTSP 245 (587)
T ss_pred HHHhC------CCceE--hHHHHHHHHHcCCcEEEecCCC-C---------CCCeEEEeC
Confidence 65443 34577 4789999999999999999872 1 248988755
No 194
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=99.86 E-value=9.7e-21 Score=210.35 Aligned_cols=241 Identities=22% Similarity=0.295 Sum_probs=173.1
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc------------------
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN------------------ 77 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~------------------ 77 (738)
++|.||||+++.+. +++...++.|++..+.|.+||+|.+.++.++..+++......
T Consensus 3 ~iV~KFGGTSva~~------e~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~el 76 (447)
T COG0527 3 LIVQKFGGTSVADA------ERILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASEL 76 (447)
T ss_pred eEEEEeCCcccCCH------HHHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHHH
Confidence 79999999999874 368999999999888899999999887656655455443211
Q ss_pred -CCccc---ccCcc----------------ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCcc
Q 004665 78 -SSLAD---LQKPQ----------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDE 131 (738)
Q Consensus 78 -~~~~~---~~~~~----------------~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~~ 131 (738)
..+.. +.... ..-....+.+.|+.....++...|+..|+++..+ +.++.++.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~~L~~~Gv~A~~~~~~~~~i~t~~~~~~a 156 (447)
T COG0527 77 ILDPFIAARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAAALNALGVDARSLDGRQAGIATDSNHGNA 156 (447)
T ss_pred hhcchhhhhHhhhHhhhhHHhhhhhhccCCCHHHHHHHHhhchHHHHHHHHHHHHhCCCceEEEchHHceeeecCccccc
Confidence 01100 00000 0011235668899888888999999999987553 2334444432
Q ss_pred cc-cccHHHH-HHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhh
Q 004665 132 DF-RKQLYDT-VQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALE 209 (738)
Q Consensus 132 ~~-~~~~~~~-i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~ 209 (738)
.. ... .+. +..+++.|.|||+.|.-.... .|+ +++. || +.||+.|++||..
T Consensus 157 ~i~~~~-~~~~l~~~~~~~~v~Vv~GF~G~~~--------------~G~--------~tTL---GR-GGSD~SA~~laa~ 209 (447)
T COG0527 157 RILDED-SERRLLRLLEEGKVPVVAGFQGINE--------------DGE--------TTTL---GR-GGSDYSAAALAAA 209 (447)
T ss_pred ccchhh-hhhhHHHHhcCCcEEEecCceeecC--------------CCC--------EEEe---CC-CcHHHHHHHHHHH
Confidence 21 222 444 888999999999987211111 121 1111 23 7899999999999
Q ss_pred cCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccch
Q 004665 210 LKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 288 (738)
Q Consensus 210 L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 288 (738)
|+||.|.|+|||||||+.||+ .|++++|++||++|+.++-..|++ .-+.++...+.+++||++|.|.++|+
T Consensus 210 l~Ad~~~I~TDVdGI~TaDPRiVp~Ar~i~~isyeEa~ELA~~GAk--------VLHprav~pa~~~~Ip~~i~~t~~p~ 281 (447)
T COG0527 210 LGADEVEIWTDVDGVYTADPRIVPDARLLPEISYEEALELAYLGAK--------VLHPRAVEPAMRSGIPLRIKNTFNPD 281 (447)
T ss_pred cCCCEEEEEECCCCCccCCCCCCCcceEcCccCHHHHHHHHHCCch--------hcCHHHHHHHHhcCCcEEEEecCCCC
Confidence 999999999999999999996 999999999999999954444544 24567889999999999999988875
Q ss_pred hHHHhhcCceeEEEEccC
Q 004665 289 SIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 289 ~i~~~~tg~~iGTvi~~~ 306 (738)
. .||++..+
T Consensus 282 ~---------~GTlI~~~ 290 (447)
T COG0527 282 A---------PGTLITAE 290 (447)
T ss_pred C---------CceEEecC
Confidence 2 69999977
No 195
>PRK08373 aspartate kinase; Validated
Probab=99.84 E-value=5.9e-20 Score=197.40 Aligned_cols=229 Identities=22% Similarity=0.276 Sum_probs=159.4
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc---------------
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN--------------- 77 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~--------------- 77 (738)
+++++|.||||+++.+ . +...++.|+.. .+|.++++|++.-+.+.+.+++......
T Consensus 2 ~~~m~V~KFGGsSv~~-~-------~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~ 72 (341)
T PRK08373 2 VEKMIVVKFGGSSVRY-D-------FEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFA 72 (341)
T ss_pred CCCCEEEEECCcchHh-H-------HHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5678999999999976 2 67777777754 4578899999886666665444322100
Q ss_pred C----Cccc-----------ccCccccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE-----EecCCCCCcccc----
Q 004665 78 S----SLAD-----------LQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVTDSDFRDEDF---- 133 (738)
Q Consensus 78 ~----~~~~-----------~~~~~~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~~~~~d~~~~~~---- 133 (738)
. .... +......-....+.++|+.....++...|++.|+++..+ ..+++++.+...
T Consensus 73 ~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~D~ils~GE~lSa~lla~~L~~~Gi~a~~l~~~~~i~t~~~~~~a~i~~~~ 152 (341)
T PRK08373 73 KRLGIDLEILSPYLKKLFNSRPDLPSEALRDYILSFGERLSAVLFAEALENEGIKGKVVDPWEILEAKGSFGNAFIDIKK 152 (341)
T ss_pred HHhccchhhHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeHHHheeecCCccceeechhh
Confidence 0 0000 000000011246678898888888999999999987543 345555544321
Q ss_pred -cccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCC
Q 004665 134 -RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKA 212 (738)
Q Consensus 134 -~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A 212 (738)
..+ .+.+..+|+.|.|||++|.-. .. .| +.. -.|+ .+||++|+.+|.+|+|
T Consensus 153 s~~~-~~~l~~~l~~g~VpVv~Gf~g-~~--------------~G----~~t-------tLGR-GGSD~tA~~lA~~L~A 204 (341)
T PRK08373 153 SKRN-VKILYELLERGRVPVVPGFIG-NL--------------NG----FRA-------TLGR-GGSDYSAVALGVLLNA 204 (341)
T ss_pred hhhh-HHHHHHHHhCCcEEEEeCCcc-CC--------------CC----eEE-------EcCC-CchHHHHHHHHHHcCC
Confidence 122 578889999999999987211 10 01 000 0122 6899999999999999
Q ss_pred CEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccc
Q 004665 213 DLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAM 287 (738)
Q Consensus 213 ~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~ 287 (738)
++++|+|||||||++||+ .|++++|++|+++|+.+ +. .+||+.+...|...++.+||++|.|.+.+
T Consensus 205 ~~v~i~TDVdGVytaDP~~v~~A~~i~~isy~Ea~e-la--------~~Gakvlhp~ai~~a~~~Ipi~v~~t~~~ 271 (341)
T PRK08373 205 KAVLIMSDVEGIYTADPKLVPSARLIPYLSYDEALI-AA--------KLGMKALHWKAIEPVKGKIPIIFGRTRDW 271 (341)
T ss_pred CEEEEEECCCccCCCCCCCCCCCeEcccCCHHHHHH-HH--------HCcChhhhHHHHHHHHcCCcEEEecCCCC
Confidence 999999999999999996 89999999999999984 33 67898888887766666999999997765
No 196
>TIGR00657 asp_kinases aspartate kinase. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis.
Probab=99.84 E-value=2e-20 Score=210.81 Aligned_cols=243 Identities=22% Similarity=0.326 Sum_probs=169.0
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcc-----cccCcc--
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-----DLQKPQ-- 87 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~-----~~~~~~-- 87 (738)
+++|+||||+++.+. +.+.++++.|+.....|+++|+|||+.+.+....++.......... .+...+
T Consensus 1 ~~~V~KFGGssv~~~------~~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~ 74 (441)
T TIGR00657 1 ALIVQKFGGTSVGNA------ERIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIE 74 (441)
T ss_pred CCEEEEeCcccCCCH------HHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 368999999999874 3688999999988788899999999988787654333221110000 000000
Q ss_pred --------------------------ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCccc-cc
Q 004665 88 --------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDED-FR 134 (738)
Q Consensus 88 --------------------------~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~~~-~~ 134 (738)
.......+.+.|+.....++...|++.|+++..+ +++..+|.+.. ..
T Consensus 75 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~ils~GE~~s~~l~~~~l~~~Gi~a~~l~~~~~~l~t~~~~~~~~~~~ 154 (441)
T TIGR00657 75 ILERLIPQAIAEELKRLLDAELVLEEKPREMDRILSFGERLSAALLSAALEELGVKAVSLLGGEAGILTDSNFGRARVII 154 (441)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhhhcCcchHhheecHHHHHHHHHHHHHHHhCCCCCEEEEcCcceEEecCCCCceeecH
Confidence 0001234456676555556889999999887654 33444443322 11
Q ss_pred ccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCE
Q 004665 135 KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADL 214 (738)
Q Consensus 135 ~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~ 214 (738)
....+.|+.+|+.|.|||++|.-+... .|+ . . ..|+ .++|++|+.+|.+|+|++
T Consensus 155 ~~~~~~l~~~l~~~~vpVv~G~~g~~~--------------~g~--~------~---~lgr-ggsD~~A~~lA~~l~a~~ 208 (441)
T TIGR00657 155 EILTERLEPLLEEGIIPVVAGFQGATE--------------KGE--T------T---TLGR-GGSDYTAALLAAALKADE 208 (441)
T ss_pred hhhHHHHHHHHhcCCEEEEeCcEeeCC--------------CCC--E------e---ecCC-CchHHHHHHHHHHcCCCE
Confidence 122788999999999999977211111 010 0 0 0011 579999999999999999
Q ss_pred EEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHh
Q 004665 215 LVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 293 (738)
Q Consensus 215 li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~ 293 (738)
|+++|||||||++||+ +|+++++++++++|+.++..+ |.+..+.+++..+.++++|++|.|++.|+.
T Consensus 209 l~~~tDV~Gv~~~DP~~~~~a~~i~~is~~ea~el~~~--------G~~v~~~~a~~~~~~~~i~i~i~~~~~~~~---- 276 (441)
T TIGR00657 209 CEIYTDVDGIYTTDPRIVPDARRIDEISYEEMLELASF--------GAKVLHPRTLEPAMRAKIPIVVKSTFNPEA---- 276 (441)
T ss_pred EEEEECCCCCCcCCCCCCCCCeECCccCHHHHHHHHhc--------CCcccCHHHHHHHHHcCCeEEEecCCCCCC----
Confidence 9999999999999995 799999999999999865443 345667889999999999999999987742
Q ss_pred hcCceeEEEEccC
Q 004665 294 LEGKRVGTLFHRD 306 (738)
Q Consensus 294 ~tg~~iGTvi~~~ 306 (738)
.||++...
T Consensus 277 -----~GT~I~~~ 284 (441)
T TIGR00657 277 -----PGTLIVAS 284 (441)
T ss_pred -----CceEEEeC
Confidence 48998765
No 197
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants. The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP.
Probab=99.83 E-value=8.2e-20 Score=194.35 Aligned_cols=232 Identities=19% Similarity=0.281 Sum_probs=158.3
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCC----cc----c-----
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS----LA----D----- 82 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~----~~----~----- 82 (738)
++|.||||+++.+. +.+..+++.|+.. ..+.++|+|++.-..+.+.++........+ .. .
T Consensus 1 ~~V~KFGGtSv~~~------~~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h 73 (298)
T cd04244 1 RLVMKFGGTSVGSA------ERIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRH 73 (298)
T ss_pred CEEEEECcccCCCH------HHHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 47999999999864 4688888888876 457888888887555665433322111000 00 0
Q ss_pred ------c-cC---c------------------------c-ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE------
Q 004665 83 ------L-QK---P------------------------Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------ 121 (738)
Q Consensus 83 ------~-~~---~------------------------~-~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------ 121 (738)
+ .. . + ..-....+.+.|+.....++...|++.|+++..+
T Consensus 74 ~~~~~~l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~l~~~~~~ 153 (298)
T cd04244 74 IKAAKEAISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDYIVSFGERLSAPIFSAALRSLGIKARALDGGEAG 153 (298)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhHhccHhHHHHHHHHHHHHHhCCCCeEEEcHHHcc
Confidence 0 00 0 0 0001124556777766667889999999987654
Q ss_pred EecCCCCCcc----cccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceec
Q 004665 122 LVTDSDFRDE----DFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFW 197 (738)
Q Consensus 122 ~~~~~d~~~~----~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i 197 (738)
+++..++.+. ....++...+..+++.|.|||+.|. ++.. ..| ++ + ..|+ +
T Consensus 154 i~t~~~~~~a~~~~~~~~~i~~~l~~ll~~~~vpVv~Gf--ig~~------------~~g--~~------t---tlgR-g 207 (298)
T cd04244 154 IITDDNFGNARPLPATYERVRKRLLPMLEDGKIPVVTGF--IGAT------------EDG--AI------T---TLGR-G 207 (298)
T ss_pred eeecCcccccccchhHHHHHHHHHHHHhhcCCEEEEeCc--cccC------------CCC--CE------E---EecC-C
Confidence 3444444332 1223334456678899999999751 1110 001 00 0 0112 6
Q ss_pred chhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcC
Q 004665 198 DNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG 276 (738)
Q Consensus 198 ~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~g 276 (738)
++|++|+.+|.+|+|++|+|+|||+|||+.||+ +|++++|++|+++|+.++.. .|.+.-+.+++..+.++|
T Consensus 208 gsD~~A~~~A~~l~a~~l~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~--------~Ga~vlhp~ai~~a~~~~ 279 (298)
T cd04244 208 GSDYSATIIGAALDADEIWIWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAY--------FGAKVLHPRTVEPAMEKG 279 (298)
T ss_pred ChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHh--------CCCcccCHHHHHHHHHcC
Confidence 999999999999999999999999999999995 89999999999999996544 356778899999999999
Q ss_pred CcEEEEeCccch
Q 004665 277 IPVVITSGFAMD 288 (738)
Q Consensus 277 i~v~I~~g~~~~ 288 (738)
||++|.|++.|+
T Consensus 280 Ipi~i~n~~~p~ 291 (298)
T cd04244 280 IPVRVKNTFNPE 291 (298)
T ss_pred CcEEEeeCCCCC
Confidence 999999998875
No 198
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative. This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between.
Probab=99.81 E-value=1.3e-19 Score=193.73 Aligned_cols=239 Identities=22% Similarity=0.286 Sum_probs=150.2
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc---------------CCc
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN---------------SSL 80 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~---------------~~~ 80 (738)
++|+||||+++.+. +..+++.|+.+.+ +.++++|+|+-..+.+.++....... ...
T Consensus 1 m~V~KFGGsSv~~~--------~~~v~~ii~~~~~-~~~~vVVVSA~~gvTd~L~~~~~~~~~~~l~~i~~~h~~~~~~L 71 (327)
T TIGR02078 1 MIVVKFGGSSVRYA--------FEEALELVKSLSE-EKRVIVVVSALKGITDCLIRYANTFDKSAALEIEEIYEEFAKEL 71 (327)
T ss_pred CEEEEECCcchHHH--------HHHHHHHHHHHhc-CCCEEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 36999999999752 6777777776544 67888888885555554332211100 000
Q ss_pred ----cccc--------Ccc--ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCccc-----ccccHHHHH
Q 004665 81 ----ADLQ--------KPQ--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDED-----FRKQLYDTV 141 (738)
Q Consensus 81 ----~~~~--------~~~--~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~-----~~~~~~~~i 141 (738)
..+. ... ..-....+.++|+.....++...+....+++.+++.+++.|.+.. ...+ .+.+
T Consensus 72 ~~~~~~~~~~l~~~~~~~~l~~~~~~d~I~s~GE~lSa~Lla~gi~a~~vd~~~~i~t~~~~~~a~~~~~~~~~~-~~~l 150 (327)
T TIGR02078 72 GVDLNILSPYLKELFNPPDLPKEALRDYILSLGERLSAVIFAEGINGKVVDPWDIFFAKGDFGNAFIDIKKSKRN-AKIL 150 (327)
T ss_pred ccchhhhHHHHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHccCCcEEEcHHHHhccCCcCCceeechhhhHhh-HHHH
Confidence 0000 000 000123455666654433333322222222333445555554321 1233 5677
Q ss_pred HHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccc
Q 004665 142 QSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDV 221 (738)
Q Consensus 142 ~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV 221 (738)
..+|+.|.|||++|.-. .. .| +.. + .|+ .+||++|+.+|.+|+|+.++++|||
T Consensus 151 ~~~l~~g~IpVv~Gf~~-~~--------------~G----~~t----t---lGR-GgSD~~Aa~lA~~L~A~~v~i~TDV 203 (327)
T TIGR02078 151 YEVLESGKIPVIPGFYG-NL--------------NG----YRV----T---LGR-GGSDYSAVALGVLLNSKLVAIMSDV 203 (327)
T ss_pred HHHHhCCcEEEEeCCcc-CC--------------CC----eEE----E---cCC-CChHHHHHHHHHhcCCCEEEEEECC
Confidence 88999999999976211 10 01 000 0 122 6899999999999999999999999
Q ss_pred cccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchH-HHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCcee
Q 004665 222 EGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT-AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRV 299 (738)
Q Consensus 222 ~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~-~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~i 299 (738)
||||++||+ +|++++|++++++|+. ++. ..||. -+++++..+.++|||++|.|.+.|. .
T Consensus 204 dGVytaDP~~v~~A~~i~~lsy~Ea~-ela--------~~Gakvlhp~a~~~a~~~~Ipi~I~~t~~~~----------~ 264 (327)
T TIGR02078 204 EGIFTADPKLVPSARLIPYLSYEEIK-IAA--------KLGMKALQWKAADLAKEYKIPVLFGRTRDWR----------M 264 (327)
T ss_pred CccCCCCCCcCCCceEccccCHHHHH-HHH--------HCCchhhHHHHHHHHHHCCCeEEEEeCCCcC----------C
Confidence 999999995 8999999999999987 333 34674 6888999999999999999987652 3
Q ss_pred EEEEccCCCCC
Q 004665 300 GTLFHRDAHLW 310 (738)
Q Consensus 300 GTvi~~~~~~~ 310 (738)
||++......|
T Consensus 265 GT~I~~~~~~~ 275 (327)
T TIGR02078 265 GTLISNRSSGM 275 (327)
T ss_pred CcEEecCCCCC
Confidence 77776543333
No 199
>PRK06291 aspartate kinase; Provisional
Probab=99.81 E-value=6.6e-19 Score=199.29 Aligned_cols=242 Identities=23% Similarity=0.317 Sum_probs=167.5
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccC--C-------cc-----
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS--S-------LA----- 81 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~--~-------~~----- 81 (738)
++|.||||+++.+. +++..+++.|+...+.|+++|+|++.-+.+...++........ + ..
T Consensus 2 ~~V~KFGGtSv~~~------~~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (465)
T PRK06291 2 RLVMKFGGTSVGDG------ERIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRER 75 (465)
T ss_pred cEEEEeCcccCCCH------HHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHH
Confidence 57999999999864 3688888888876667889988888765566543332211000 0 00
Q ss_pred ------cc-cCc----------------------------c-ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE----
Q 004665 82 ------DL-QKP----------------------------Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL---- 121 (738)
Q Consensus 82 ------~~-~~~----------------------------~-~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~---- 121 (738)
.+ ... + ..-....+.+.|+.....++...|++.|+++..+
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~~~~L~~~Gi~a~~l~~~~ 155 (465)
T PRK06291 76 HYKAIEEAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDYILSFGERLSAPILSGALRDLGIKSVALTGGE 155 (465)
T ss_pred HHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHhhhHHHHHHHHHHHHHhCCCCeEEEchHH
Confidence 00 000 0 0001234667788777777889999999987554
Q ss_pred --EecCCCCCccc----ccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCce
Q 004665 122 --LVTDSDFRDED----FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGI 195 (738)
Q Consensus 122 --~~~~~d~~~~~----~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~ 195 (738)
+++..+|.+.. .+.++.+.++.+++.|.|||+.|. ++.. ..| .+ ++ .|+
T Consensus 156 ~~i~t~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gf--ig~~------------~~g--~~------~t---lgr 210 (465)
T PRK06291 156 AGIITDSNFGNARPLPKTYERVKERLEPLLKEGVIPVVTGF--IGET------------EEG--II------TT---LGR 210 (465)
T ss_pred CcEEecCCCCceeechhhHHHHHHHHHHHhhcCcEEEEeCc--EEcC------------CCC--CE------EE---ecC
Confidence 34444444322 123345678889999999999762 1110 001 00 00 011
Q ss_pred ecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHH
Q 004665 196 FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 274 (738)
Q Consensus 196 ~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~ 274 (738)
+++|++|+.+|.+|+|+.|+++|||||||+.||+ +|++++|+++++.|+.++.. .|.+.-+++++..+.+
T Consensus 211 -ggsD~~A~~~A~~l~a~~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~~--------~G~~v~~~~a~~~~~~ 281 (465)
T PRK06291 211 -GGSDYSAAIIGAALDADEIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELSY--------FGAKVLHPRTIEPAME 281 (465)
T ss_pred -CChHHHHHHHHHhcCCCEEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHHh--------CCCcccCHHHHHHHHH
Confidence 6999999999999999999999999999999995 89999999999999985432 3667889999999999
Q ss_pred cCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 275 AGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 275 ~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
+|||++|.|++.|+ ..||++...
T Consensus 282 ~~i~i~i~~~~~~~---------~~gt~i~~~ 304 (465)
T PRK06291 282 KGIPVRVKNTFNPE---------FPGTLITSD 304 (465)
T ss_pred cCCcEEEecCCCCC---------CCceEEEec
Confidence 99999999998874 258888754
No 200
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=99.80 E-value=8.8e-19 Score=185.70 Aligned_cols=233 Identities=18% Similarity=0.161 Sum_probs=156.6
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccC-C----cccccCc----
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-S----LADLQKP---- 86 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~-~----~~~~~~~---- 86 (738)
++|.||||+++.+.. .+.++++.|+.-.+.+.++|+|.+.-..+...+++....... . ...+...
T Consensus 1 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~ 74 (295)
T cd04259 1 WVVLKFGGTSVSSRA------RWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNL 74 (295)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 369999999998743 678888888765556777888888755555433222111000 0 0000000
Q ss_pred -------------------------------cccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE-----EecCCCCCc
Q 004665 87 -------------------------------QNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVTDSDFRD 130 (738)
Q Consensus 87 -------------------------------~~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~~~~~d~~~ 130 (738)
...-....+.+.|+.....++..+|++.|+++..+ .+++.++..
T Consensus 75 ~~~L~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~~~~~~~~ 154 (295)
T cd04259 75 AEQLEVDADALLANDLAQLQRWLTGISLLKQASPRTRAEVLALGELMSTRLGAAYLEAQGLKVKWLDARELLTATPTLGG 154 (295)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcHHHheeecccccc
Confidence 00001234567888777778899999999987553 344444431
Q ss_pred c-cc-------cccHHHHHHHHHhC-CceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhh
Q 004665 131 E-DF-------RKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDS 201 (738)
Q Consensus 131 ~-~~-------~~~~~~~i~~lL~~-g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~ 201 (738)
. .. .....+.|...++. +.|||+.|.-+..+ .|. .++. |+ .+||+
T Consensus 155 ~~~~~~~a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~~--------------~G~--------~ttL---Gr-ggsD~ 208 (295)
T cd04259 155 ETMNYLSARCESEYADALLQKRLADGAQLIITQGFIARNA--------------HGE--------TVLL---GR-GGSDT 208 (295)
T ss_pred cccccccceehhhhhHHHHHHHHhcCCceeEeCCceeeCC--------------CCC--------EEEE---CC-CChHH
Confidence 1 00 01114566766665 67999987311111 110 0111 22 78999
Q ss_pred HHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEE
Q 004665 202 LAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVV 280 (738)
Q Consensus 202 ~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~ 280 (738)
+|+.+|.+|+|+.|+++|||+|||+.||+ +|++++|++|+++|+.++.. .|++.-+.+++..+.++|||++
T Consensus 209 tA~~lA~~l~A~~l~i~TdV~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~--------~Ga~v~h~~a~~~a~~~~ipi~ 280 (295)
T cd04259 209 SAAYFAAKLQAARCEIWTDVPGLFTANPHEVPHARLLKRLDYDEAQEIAT--------MGAKVLHPRCIPPARRANIPMV 280 (295)
T ss_pred HHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEeceeCHHHHHHHHH--------cCCcccCHHHHHHHHHCCCCEE
Confidence 99999999999999999999999999995 79999999999999986544 4667889999999999999999
Q ss_pred EEeCccch
Q 004665 281 ITSGFAMD 288 (738)
Q Consensus 281 I~~g~~~~ 288 (738)
|.|++.|+
T Consensus 281 i~~~~~p~ 288 (295)
T cd04259 281 VRSTERPE 288 (295)
T ss_pred EEeCCCCC
Confidence 99998875
No 201
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH). These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act
Probab=99.80 E-value=1.4e-18 Score=184.37 Aligned_cols=231 Identities=18% Similarity=0.231 Sum_probs=153.7
Q ss_pred EEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCc-------ccc------
Q 004665 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSL-------ADL------ 83 (738)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~-------~~~------ 83 (738)
.|.||||+++.+.. .+.++++.|+... ++.++++|++.-..+.+.++........+. ..+
T Consensus 2 ~V~KFGGtSv~~~~------~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~~ 74 (294)
T cd04257 2 KVLKFGGTSLANAE------RIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHLD 74 (294)
T ss_pred EEEEeCccccCCHH------HHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Confidence 59999999998743 6788888887654 467888888875556654333222100000 000
Q ss_pred ------cCc--------------c--------------ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE-----Eec
Q 004665 84 ------QKP--------------Q--------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVT 124 (738)
Q Consensus 84 ------~~~--------------~--------------~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~~~ 124 (738)
... + ..-....+.+.|+.....++...|++.|+++..+ +++
T Consensus 75 ~~~~l~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t 154 (294)
T cd04257 75 LITELLSGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKVLSFGERLSARLLSALLNQQGLDAAWIDARELIVT 154 (294)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhheeHHHHHHHHHHHHHHHhCCCCeEEEchHHeeEe
Confidence 000 0 0011134457788777778899999999987543 455
Q ss_pred CCCCCcccccc-cHHHHHHHHHhC-CceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhH
Q 004665 125 DSDFRDEDFRK-QLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSL 202 (738)
Q Consensus 125 ~~d~~~~~~~~-~~~~~i~~lL~~-g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~ 202 (738)
+.++.+..... ...+.++.+++. +.|||++|.-+... .|. ..+ .|+ ..||++
T Consensus 155 ~~~~~~a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~--------------~G~--------~tt---lGR-GGSD~~ 208 (294)
T cd04257 155 DGGYLNAVVDIELSKERIKAWFSSNGKVIVVTGFIASNP--------------QGE--------TTT---LGR-NGSDYS 208 (294)
T ss_pred cCCCCceEechHhhHHHHHHHHhcCCCEEEecCcccCCC--------------CCC--------EEE---CCC-CchHHH
Confidence 55554432211 125677777776 89999987311111 110 011 123 778999
Q ss_pred HHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEE
Q 004665 203 AGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVI 281 (738)
Q Consensus 203 A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I 281 (738)
|+.+|..|+|+.++++|||||||+.||+ +|++++|++|+++|+.+...+|++ .-..++...+.++|||++|
T Consensus 209 A~~lA~~l~a~~l~i~tdVdGvyt~DP~~~~~A~~i~~is~~ea~~l~~~Gak--------v~h~~~~~~a~~~~Ipi~i 280 (294)
T cd04257 209 AAILAALLDADQVEIWTDVDGVYSADPRKVKDARLLPSLSYQEAMELSYFGAK--------VLHPKTIQPVAKKNIPILI 280 (294)
T ss_pred HHHHHHHhCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHhCCCc--------ccCHHHHHHHHHCCCCEEE
Confidence 9999999999999999999999999995 899999999999999855433322 1234566789999999999
Q ss_pred EeCccch
Q 004665 282 TSGFAMD 288 (738)
Q Consensus 282 ~~g~~~~ 288 (738)
.|++.|+
T Consensus 281 ~~~~~p~ 287 (294)
T cd04257 281 KNTFNPE 287 (294)
T ss_pred eeCCCCC
Confidence 9998875
No 202
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=99.79 E-value=4.1e-18 Score=179.65 Aligned_cols=161 Identities=20% Similarity=0.190 Sum_probs=118.5
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCcccc-cccHHHHHHHHHhCCceEEEeCCCceeccCCC
Q 004665 93 KACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAP 165 (738)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~~~~-~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~ 165 (738)
..+.+.|+.....++...|+..|+++..+ ++++.+|.+... ... .+.+..+++.+.|||+.|.-+...
T Consensus 113 d~i~s~GE~lSa~ll~~~L~~~Gi~a~~ld~~~~~i~t~~~~~~a~~~~~~-~~~~~~~~~~~~v~Vv~Gf~g~~~---- 187 (288)
T cd04245 113 DALKARGEYLNAQLMAAYLNYQGIDARYVIPKDAGLVVTDEPGNAQILPES-YQKIKKLRDSDEKLVIPGFYGYSK---- 187 (288)
T ss_pred HHHHHHhHHHHHHHHHHHHHHCCCCeEEEcHHHCceeecCCccccccchhh-HHHHHHHHhCCCEEEEeCccccCC----
Confidence 35667888777777899999999987554 344555543211 123 667788888899999987211111
Q ss_pred cccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccc
Q 004665 166 YEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAK 244 (738)
Q Consensus 166 ~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e 244 (738)
.|. + +--|+ .+||+.|+.+|.+|+|+.+.++|||||||++||+ +|+++.|++|+++|
T Consensus 188 ----------~G~--~---------ttLgR-ggSD~tAal~A~~l~A~~v~i~tdVdGvytaDPr~v~~A~~i~~lsy~E 245 (288)
T cd04245 188 ----------NGD--I---------KTFSR-GGSDITGAILARGFQADLYENFTDVDGIYAANPRIVANPKPISEMTYRE 245 (288)
T ss_pred ----------CCC--E---------EEcCC-CchHHHHHHHHHHcCCCEEEEEeCCCceECCCCCCCCCCeEeCccCHHH
Confidence 110 0 00122 6899999999999999999999999999999996 89999999999999
Q ss_pred hHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccch
Q 004665 245 HQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 288 (738)
Q Consensus 245 ~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 288 (738)
+.++..+|.+ .....+...+.+++||++|.|.+.|+
T Consensus 246 A~ela~~Gak--------Vlhp~ai~~a~~~~Ipi~v~n~~~p~ 281 (288)
T cd04245 246 MRELSYAGFS--------VFHDEALIPAIEAGIPINIKNTNHPE 281 (288)
T ss_pred HHHHHHCCCc--------ccCHHHHHHHHHCCCcEEEeeCCCCC
Confidence 9965444433 23455888899999999999998875
No 203
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-
Probab=99.78 E-value=2e-18 Score=183.04 Aligned_cols=230 Identities=21% Similarity=0.272 Sum_probs=152.1
Q ss_pred EEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCC-------ccc-------
Q 004665 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS-------LAD------- 82 (738)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~-------~~~------- 82 (738)
.|.||||+++.+. +.+.++++.|+.-. +.++++|++.-..+.+..+......... ...
T Consensus 2 ~V~KFGGtSv~~~------~~i~~v~~iI~~~~--~~~~vvVvSA~~gvTd~L~~~~~~a~~~~~~~~~~l~~i~~~h~~ 73 (293)
T cd04243 2 KVLKFGGTSVASA------ERIRRVADIIKSRA--SSPVLVVVSALGGVTNRLVALAELAASGDDAQAIVLQEIRERHLD 73 (293)
T ss_pred EEEEECccccCCH------HHHHHHHHHHHHhc--CCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Confidence 6999999999874 35777777776543 6788888887555655433322110000 000
Q ss_pred ----c-cC-c-------------c--------------ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE-----Eec
Q 004665 83 ----L-QK-P-------------Q--------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVT 124 (738)
Q Consensus 83 ----~-~~-~-------------~--------------~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~~~ 124 (738)
+ .. . + ..-....+.+.|+.....++...|++.|+++..+ +.+
T Consensus 74 ~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~s~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t 153 (293)
T cd04243 74 LIKELLSGESAAELLAALDSLLERLKDLLEGIRLLGELSDKTRAEVLSFGELLSSRLMSAYLQEQGLPAAWLDARELLLT 153 (293)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCchhhhHheeHHHHHHHHHHHHHHHhCCCCcEEEcHHHeEEe
Confidence 0 00 0 0 0001134457787777777899999999987653 344
Q ss_pred CCCCCcccc-cccHHHHHHHHHhC-CceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhH
Q 004665 125 DSDFRDEDF-RKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSL 202 (738)
Q Consensus 125 ~~d~~~~~~-~~~~~~~i~~lL~~-g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~ 202 (738)
+.++.+... +....+.++.+++. +.|||++|.-+... .|. + ++ .|+ .+||++
T Consensus 154 ~~~~~~~~~~~~~s~~~~~~~~~~~~~v~Vv~Gfig~~~--------------~G~--~------tt---LGR-ggsD~~ 207 (293)
T cd04243 154 DDGFLNAVVDLKLSKERLAQLLAEHGKVVVTQGFIASNE--------------DGE--T------TT---LGR-GGSDYS 207 (293)
T ss_pred cCCCCcchhhhHHHHHHHHHHHhcCCCEEEecCccccCC--------------CCC--E------EE---eCC-CCcHHH
Confidence 444443221 11114577788887 89999987311111 110 0 11 123 678999
Q ss_pred HHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEE
Q 004665 203 AGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVI 281 (738)
Q Consensus 203 A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I 281 (738)
|+.+|.+|+|+.|+++|||||||++||+ +|++++|++++++|+.++..+|++ .-..++...+.++|||++|
T Consensus 208 A~~~a~~l~a~~~~i~tdvdGiyt~dP~~~~~a~~i~~ls~~ea~~l~~~Gak--------vl~p~ai~~a~~~~i~i~i 279 (293)
T cd04243 208 AALLAALLDAEEVEIWTDVDGVYTADPRKVPDARLLKELSYDEAMELAYFGAK--------VLHPRTIQPAIRKNIPIFI 279 (293)
T ss_pred HHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHhCCCc--------ccCHHHHHHHHHCCCcEEE
Confidence 9999999999999999999999999995 899999999999999865444432 2245677889999999999
Q ss_pred EeCccch
Q 004665 282 TSGFAMD 288 (738)
Q Consensus 282 ~~g~~~~ 288 (738)
.|++.|+
T Consensus 280 ~~~~~p~ 286 (293)
T cd04243 280 KNTFNPE 286 (293)
T ss_pred ecCCCCC
Confidence 9998875
No 204
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.78 E-value=1.2e-18 Score=175.55 Aligned_cols=202 Identities=25% Similarity=0.348 Sum_probs=128.3
Q ss_pred EEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcccccCccccchHHHHHH
Q 004665 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAA 97 (738)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 97 (738)
|||+|||++.+ +..+.+.++.+. |++++||.|||+.....+ +.... .+..+.... .+.+.+
T Consensus 1 vvKiGGsl~~~---------~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r-~~~~~--~g~~~~~ad-----~mgila 61 (203)
T cd04240 1 VVKIGGSLIRE---------AVRLLRWLKTLS--GGGVVIVPGGGPFADVVR-RYQER--KGLSDAAAH-----WMAILA 61 (203)
T ss_pred CEEEccccccc---------HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHH-HHHHH--cCCChHHHH-----HHHHHH
Confidence 79999999855 356777777664 789999999998754431 11111 111111111 122333
Q ss_pred hhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccc
Q 004665 98 VGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLEN 177 (738)
Q Consensus 98 ~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g 177 (738)
.-++.+ +++... ......+ ...+.+++..|.|||+. | |+... .
T Consensus 62 t~~na~------~l~~~~--------------~~~~~~~-~~~~~~~~~~g~ipV~~------P----~~~~~------~ 104 (203)
T cd04240 62 MEQYGY------LLADLE--------------PRLVART-LAELTDVLERGKIAILL------P----YRLLL------D 104 (203)
T ss_pred HHHHHH------HHhccC--------------CccccCC-HHHHHHHHHCCCcEEEe------C----chhhc------c
Confidence 333222 222110 0001122 45678899999999993 3 11000 0
Q ss_pred cccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHHhcCCCCcc
Q 004665 178 YLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 257 (738)
Q Consensus 178 ~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~ 257 (738)
..+ .+++.++|+|++|+++|.+|+|++|+++|||||||++| +++|++++.+|+.. ...
T Consensus 105 -~~~---------~~~~~~~ttD~lAa~lA~~l~A~~Li~ltdVdGVy~~d-----a~~i~~i~~~e~~~-------~~~ 162 (203)
T cd04240 105 -TDP---------LPHSWEVTSDSIAAWLAKKLGAKRLVIVTDVDGIYEKD-----GKLVNEIAAAELLG-------ETS 162 (203)
T ss_pred -cCC---------CCcccccCHHHHHHHHHHHcCCCEEEEEeCCccccCCC-----CcCccccCHHHhCC-------CCe
Confidence 000 01122499999999999999999999999999999874 88999999876541 111
Q ss_pred ccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCc-eeEEEE
Q 004665 258 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK-RVGTLF 303 (738)
Q Consensus 258 ~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~-~iGTvi 303 (738)
-.+|.+|+ +.++|++++|+||+.|+.+.+.+.|+ ..||.+
T Consensus 163 -id~~~~~~-----~~~~gi~v~I~~g~~~~~l~~~l~g~~~~GT~I 203 (203)
T cd04240 163 -VDPAFPRL-----LTKYGIRCYVVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred -ehhhHHHH-----HHhCCCeEEEECCCCccHHHHHHCCCCCCCCCC
Confidence 12344443 57789999999999999999988887 678853
No 205
>PRK09084 aspartate kinase III; Validated
Probab=99.76 E-value=5.5e-18 Score=190.48 Aligned_cols=238 Identities=20% Similarity=0.203 Sum_probs=160.7
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCC------cc--------
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS------LA-------- 81 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~------~~-------- 81 (738)
++|.||||+++.+. +++.++++.|+. .+.++++|++.-+.+.+.++...+....+ ..
T Consensus 1 m~V~KFGGtSv~~~------e~i~~v~~ii~~---~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~ 71 (448)
T PRK09084 1 LVVAKFGGTSVADF------DAMNRSADIVLS---NPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYA 71 (448)
T ss_pred CEEEEECccCcCCH------HHHHHHHHHHhc---CCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 47999999999874 367788877764 46788888888666665433332111000 00
Q ss_pred ---cc--c-------------------Cc---cccchHHHHHHhhhHHHHHHHHHHhhcCCCceeE-----EEecCCCCC
Q 004665 82 ---DL--Q-------------------KP---QNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTDSDFR 129 (738)
Q Consensus 82 ---~~--~-------------------~~---~~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~-----~~~~~~d~~ 129 (738)
.+ + .. ........+.+.|+.....++...|++.|+++.. +++++.+|.
T Consensus 72 ~~~~l~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~i~s~GE~lSa~l~~~~L~~~Gi~a~~l~~~~~i~t~~~~~ 151 (448)
T PRK09084 72 ILDRLGDPNVVREEIERLLENITVLAEAASLATSPALTDELVSHGELMSTLLFVELLRERGVQAEWFDVRKVMRTDDRFG 151 (448)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhhhhHHHHHHHHHHHHHHHhCCCCcEEEchHHeEEecCCCC
Confidence 00 0 00 0001224566888887777899999999998543 566766665
Q ss_pred cccc-----cccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHH
Q 004665 130 DEDF-----RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAG 204 (738)
Q Consensus 130 ~~~~-----~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~ 204 (738)
+... .....+.+..+++.+ |||++|.-+..+ .|. . . .-|+ .+||+.|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~--------------~G~-----~---t---tLgR-ggSD~~a~ 204 (448)
T PRK09084 152 RAEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDE--------------KGR-----T---T---TLGR-GGSDYSAA 204 (448)
T ss_pred cccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCC--------------CCC-----E---e---ecCC-CchHHHHH
Confidence 5322 112245666778888 999987311111 111 0 0 0123 78999999
Q ss_pred HHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEe
Q 004665 205 LLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITS 283 (738)
Q Consensus 205 ~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~ 283 (738)
.+|..|+|+.++++|||||||+.||+ +|++++|++|+++|+.++..+|.+ .-...+...+.++++|++|.|
T Consensus 205 ~~a~~l~a~~~~i~tdv~Gi~t~dP~~~~~a~~i~~is~~ea~ela~~Ga~--------vlh~~~~~~~~~~~i~i~i~~ 276 (448)
T PRK09084 205 LLAEALNASRVEIWTDVPGIYTTDPRIVPAAKRIDEISFEEAAEMATFGAK--------VLHPATLLPAVRSNIPVFVGS 276 (448)
T ss_pred HHHHHcCCCEEEEEECCCccccCCCCCCCCCeEcccCCHHHHHHHHhCCCc--------ccCHHHHHHHHHcCCcEEEEe
Confidence 99999999999999999999999996 899999999999999854333322 234566778899999999999
Q ss_pred CccchhHHHhhcCceeEEEEccC
Q 004665 284 GFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 284 g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
++.|+ ..||++...
T Consensus 277 ~~~~~---------~~GT~I~~~ 290 (448)
T PRK09084 277 SKDPE---------AGGTWICND 290 (448)
T ss_pred CCCCC---------CCceEEecC
Confidence 98874 258888654
No 206
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=99.74 E-value=3.6e-17 Score=172.92 Aligned_cols=229 Identities=20% Similarity=0.197 Sum_probs=148.6
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCC----c----ccccCcc
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS----L----ADLQKPQ 87 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~----~----~~~~~~~ 87 (738)
+.|.||||+++.+.. .+.++++.|+. .+.++|+|++.-..+.+.++........+ . ..+...+
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~l~~l~~~h 71 (292)
T cd04258 1 MVVAKFGGTSVADYA------AMLRCAAIVKS---DASVRLVVVSASAGVTNLLVALADAAESGEEIESIPQLHEIRAIH 71 (292)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHhc---cCCCEEEEEeCCCCchHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 369999999998743 56777776653 25678888887555555433322110000 0 0000000
Q ss_pred -------------------------------------ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeE-----EEecC
Q 004665 88 -------------------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTD 125 (738)
Q Consensus 88 -------------------------------------~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~-----~~~~~ 125 (738)
..-....+.+.|+.....++...|+..|+++.. +.+++
T Consensus 72 ~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~ 151 (292)
T cd04258 72 FAILNRLGAPEELRAKLEELLEELTQLAEGAALLGELSPASRDELLSFGERMSSLLFSEALREQGVPAEWFDVRTVLRTD 151 (292)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHhhhccccccChHhHhHhhhHHHHHHHHHHHHHHHhCCCCeEEEchHHeEEec
Confidence 000123556778877777788999999998654 34555
Q ss_pred CCCCcccc-----cccHHHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchh
Q 004665 126 SDFRDEDF-----RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDND 200 (738)
Q Consensus 126 ~d~~~~~~-----~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D 200 (738)
.+|.+... ..++...++.+ ..+.|||+.|.-+... .|. .++. |+ .+||
T Consensus 152 ~~~~~a~~~~~~~~~~~~~~~~~~-~~~~v~Vv~Gf~g~~~--------------~G~--------~ttL---Gr-ggsD 204 (292)
T cd04258 152 SRFGRAAPDLNALAELAAKLLKPL-LAGTVVVTQGFIGSTE--------------KGR--------TTTL---GR-GGSD 204 (292)
T ss_pred CCCccccccHHHHHHHHHHHHHHh-hcCCEEEECCccccCC--------------CCC--------EEec---CC-CchH
Confidence 55544221 11222333333 4568999987311111 111 1111 22 7899
Q ss_pred hHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcE
Q 004665 201 SLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPV 279 (738)
Q Consensus 201 ~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v 279 (738)
+.|+.+|..|+|+.++++|||+|||+.||+ +|++++|++|+++|+.+...+|.+ ....++...+.+++||+
T Consensus 205 ~~a~~~a~~l~a~~~~i~tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~~Gak--------vlhp~a~~~~~~~~ipi 276 (292)
T cd04258 205 YSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAEMATFGAK--------VLHPATLLPAIRKNIPV 276 (292)
T ss_pred HHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEeceeCHHHHHHHHHCCCc--------ccCHHHHHHHHHcCCcE
Confidence 999999999999999999999999999995 899999999999999965444432 22567788899999999
Q ss_pred EEEeCccch
Q 004665 280 VITSGFAMD 288 (738)
Q Consensus 280 ~I~~g~~~~ 288 (738)
+|.|.+.|+
T Consensus 277 ~i~~~~~p~ 285 (292)
T cd04258 277 FVGSSKDPE 285 (292)
T ss_pred EEEeCCCCC
Confidence 999988874
No 207
>PRK05925 aspartate kinase; Provisional
Probab=99.72 E-value=9e-17 Score=179.29 Aligned_cols=239 Identities=20% Similarity=0.205 Sum_probs=154.7
Q ss_pred CeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCC----cc---------
Q 004665 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS----LA--------- 81 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~----~~--------- 81 (738)
.++|.||||+++.+. +++.++++.|+. ..++++|++.-..+.+.+.......... ..
T Consensus 2 ~~~V~KFGGtSv~~~------e~i~~v~~ii~~----~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~i~~~~~~~ 71 (440)
T PRK05925 2 APLVYKFGGTSLGTA------ESIRRVCDIICK----EKPSFVVVSAVAGVTDLLEEFCRLSKGKREALTEKIREKHEEI 71 (440)
T ss_pred CcEEEEECccccCCH------HHHHHHHHHHhc----CCCEEEEECCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 468999999999874 356777776653 2467777777655665432221100000 00
Q ss_pred --cc------cC-----------cc-ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeE-----EEecCCCCCccccc-c
Q 004665 82 --DL------QK-----------PQ-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTDSDFRDEDFR-K 135 (738)
Q Consensus 82 --~~------~~-----------~~-~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~-----~~~~~~d~~~~~~~-~ 135 (738)
.+ .. .+ .......+.+.|+.....++..+|+..|+++.. +.+++.+|.+.... .
T Consensus 72 ~~~l~~~~~~~~~~~~L~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~a~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~~ 151 (440)
T PRK05925 72 AKELGIEFSLSPWWERLEHFEDVEEISSEDQARILAIGEDISASLICAYCCTYVLPLEFLEARQVILTDDQYLRAVPDLA 151 (440)
T ss_pred HHHhhcchhhhHHHHHHHHHHHhCcCCchhhhhheehhHHHHHHHHHHHHHhCCCCeEEEcHHHhEeecCCccccccCHH
Confidence 00 00 00 011223556778877777889999999997644 45566555542221 1
Q ss_pred cH-HHHHHHHHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCE
Q 004665 136 QL-YDTVQSLLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADL 214 (738)
Q Consensus 136 ~~-~~~i~~lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~ 214 (738)
.. ....+..++.+.|||+.|.-+..+ .|. .++. | +++||+.|+++|.+|+|+.
T Consensus 152 ~~~~~~~~~~~~~~~v~Vv~GF~g~~~--------------~G~--------~ttL---g-rGgsD~~AallA~~l~Ad~ 205 (440)
T PRK05925 152 LMQTAWHELALQEDAIYIMQGFIGANS--------------SGK--------TTVL---G-RGGSDFSASLIAELCKARE 205 (440)
T ss_pred HHHHHHHHhhccCCcEEEecCcceeCC--------------CCC--------EEEe---c-cCcHHHHHHHHHHHcCCCE
Confidence 11 222233456778999987311111 121 0111 1 2899999999999999999
Q ss_pred EEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHh
Q 004665 215 LVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 293 (738)
Q Consensus 215 li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~ 293 (738)
++++|||||||++||+ +|++++|++++++|+.++...|+ ....++| ...+.++|||++|.|++.|+
T Consensus 206 ~~i~TdVdGvytaDP~~~~~A~~i~~is~~ea~ela~~Ga--~vl~~~~------~~~a~~~~Ipi~I~~~~~p~----- 272 (440)
T PRK05925 206 VRIYTDVNGIYTMDPKIIKDAQLIPELSFEEMQNLASFGA--KVLHPPM------LKPCVRAGIPIFVTSTFDVT----- 272 (440)
T ss_pred EEEEEcCCccCCCCcCCCCCCeEeeEECHHHHHHHHhCCC--CcCCHHH------HHHHHHCCCcEEEecCCCCC-----
Confidence 9999999999999995 89999999999999885444443 2345555 47788899999999999885
Q ss_pred hcCceeEEEEccC
Q 004665 294 LEGKRVGTLFHRD 306 (738)
Q Consensus 294 ~tg~~iGTvi~~~ 306 (738)
..||++.+.
T Consensus 273 ----~~GT~i~~~ 281 (440)
T PRK05925 273 ----KGGTWIYAS 281 (440)
T ss_pred ----CCccEEecC
Confidence 258888754
No 208
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=99.72 E-value=1.1e-16 Score=170.09 Aligned_cols=169 Identities=17% Similarity=0.216 Sum_probs=115.7
Q ss_pred HHHHhhhHHHHHHHHHHhhcCCCceeEE-----EecCCCC--CcccccccHHHHHHH-HHh-CCceEEEeCCCceeccCC
Q 004665 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVTDSDF--RDEDFRKQLYDTVQS-LLD-LRVIPIFNENDAVSTRKA 164 (738)
Q Consensus 94 ~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~~~~~d~--~~~~~~~~~~~~i~~-lL~-~g~iPVi~g~~~v~~~~~ 164 (738)
.+.+.|+.....++...|++.|+++..+ ..++.+. .+........+.+.. +.+ .+.|||+.|. ++..
T Consensus 127 ~i~s~GE~lSa~l~a~~L~~~Gi~a~~ld~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~GF--ig~~-- 202 (306)
T cd04247 127 LVISTGEKLSCRFMAAVLRDRGVDAEYVDLSHIVDLDFSIEALDQTFYDELAQVLGEKITACENRVPVVTGF--FGNV-- 202 (306)
T ss_pred HHhhHHHHHHHHHHHHHHHhCCCCeEEEcHHHheecCCCccccccchhHHHHHHHHHHhhccCCceEEeecc--EecC--
Confidence 5567888777778899999999987553 2222211 001101111222222 332 5789999872 1110
Q ss_pred CcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeecc
Q 004665 165 PYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRA 243 (738)
Q Consensus 165 ~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~ 243 (738)
..|. .++ .|+ ..||++|+.+|..|+|+.++++|||+|||+.||+ +|++++|++|+++
T Consensus 203 ----------~~G~--------~tt---LGR-gGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ 260 (306)
T cd04247 203 ----------PGGL--------LSQ---IGR-GYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPE 260 (306)
T ss_pred ----------CCCC--------eEE---eCC-CchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHH
Confidence 0111 111 123 7899999999999999999999999999999995 8999999999999
Q ss_pred chHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEcc
Q 004665 244 KHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 305 (738)
Q Consensus 244 e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~ 305 (738)
|+.++..+|++ .-+.++...|.+++||++|.|.+.|+ ..||+|.+
T Consensus 261 ea~el~~~Gak--------VlHp~ti~pa~~~~Ipi~i~nt~~P~---------~~GT~I~~ 305 (306)
T cd04247 261 EAAELTYYGSE--------VIHPFTMEQVIKARIPIRIKNVENPR---------GEGTVIYP 305 (306)
T ss_pred HHHHHHhCcCc--------ccCHHHHHHHHHcCCcEEEecCCCCC---------CCCcEEcC
Confidence 99965444433 24567888999999999999988774 25888754
No 209
>PRK09034 aspartate kinase; Reviewed
Probab=99.72 E-value=1.5e-16 Score=179.37 Aligned_cols=171 Identities=20% Similarity=0.227 Sum_probs=124.0
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCCCceeEE------EecCCCCCcccccccHHHHHHHHHhCCceEEEeCCCceeccCCCc
Q 004665 93 KACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 166 (738)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi~g~~~v~~~~~~~ 166 (738)
..+.+.|+.....++...|++.|+++..+ .++++++.+......-.+.+..++..+.|||+.|.=+...
T Consensus 113 d~l~s~GE~~S~~l~a~~L~~~g~~a~~~~~~~~~~~t~~~~~~a~i~~~~~~~~~~~~~~~~v~Vv~GFig~~~----- 187 (454)
T PRK09034 113 DAFKARGEDLNAKLIAAYLNYEGIPARYVDPKEAGIIVTDEPGNAQVLPESYDNLKKLRDRDEKLVIPGFFGVTK----- 187 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcEEEchHHceEEecCCcCceeEcHhhHHHHHHHHhcCCEEEecCccccCC-----
Confidence 35667888777778899999999987553 4555555542211112556666777888999987211111
Q ss_pred ccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccch
Q 004665 167 EVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKH 245 (738)
Q Consensus 167 ~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~ 245 (738)
.|. .++. |+ +.+|+.|+.+|.+|+|+.+.++|||||||++||+ .|+++.+++|+++|+
T Consensus 188 ---------~g~--------~ttl---gR-ggSD~tA~~la~~l~A~~~~i~tdV~Gi~taDPr~v~~A~~l~~lsy~Ea 246 (454)
T PRK09034 188 ---------DGQ--------IVTF---SR-GGSDITGAILARGVKADLYENFTDVDGIYAANPRIVKNPKSIKEITYREM 246 (454)
T ss_pred ---------CCC--------EEec---CC-CcHHHHHHHHHHHcCCCEEEEEecCCccCcCCCCCCCCCeECCccCHHHH
Confidence 121 0111 23 7899999999999999999999999999999996 899999999999999
Q ss_pred HHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 246 QAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 246 ~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
.++..+|.+ .-..++...|.+++||++|.|.+.|+ ..||++..+
T Consensus 247 ~ela~~Gak--------vlhp~ai~~a~~~~Ipi~v~~~~~p~---------~~GT~I~~~ 290 (454)
T PRK09034 247 RELSYAGFS--------VFHDEALIPAYRGGIPINIKNTNNPE---------DPGTLIVPD 290 (454)
T ss_pred HHHHhCCcc--------cCCHHHHHHHHHcCCCEEEEcCCCCC---------CCccEEEec
Confidence 965444433 23456888899999999999988773 258888754
No 210
>PLN02551 aspartokinase
Probab=99.71 E-value=1.8e-16 Score=180.04 Aligned_cols=244 Identities=16% Similarity=0.214 Sum_probs=159.3
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhccccccc---------CC-ccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN---------SS-LAD 82 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~---------~~-~~~ 82 (738)
+..++|.||||+++.+. +++.++++.|+... +.++|+|++.-+.+...++....... .. ...
T Consensus 50 ~~~~~V~KFGGtSv~~~------e~i~~v~~iI~~~~--~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~ 121 (521)
T PLN02551 50 KQLTVVMKFGGSSVASA------ERMREVADLILSFP--DERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSA 121 (521)
T ss_pred cCceEEEEECCCccCCH------HHHHHHHHHHHhcC--CCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHH
Confidence 44577999999999874 36788888887542 34577777775445544333210000 00 000
Q ss_pred c-------------cCc--------------------c-ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE------E
Q 004665 83 L-------------QKP--------------------Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------L 122 (738)
Q Consensus 83 ~-------------~~~--------------------~-~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~------~ 122 (738)
+ ... + ..-....+.++|+.....++..+|++.|+++..+ +
T Consensus 122 i~~~h~~~~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~lda~~~gi 201 (521)
T PLN02551 122 IRELHLRTADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYLVSFGERMSTRIFAAYLNKIGVKARQYDAFDIGF 201 (521)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhHHHHHHHHHHHHHHHHCCCCcEEechHHcce
Confidence 0 000 0 0011245678888877778999999999987553 4
Q ss_pred ecCCCCCcccccccHHHHHHHHH-----hCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceec
Q 004665 123 VTDSDFRDEDFRKQLYDTVQSLL-----DLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFW 197 (738)
Q Consensus 123 ~~~~d~~~~~~~~~~~~~i~~lL-----~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i 197 (738)
+++.+|.+........+.++..+ +.+.|||+.|.-+..+ ..|. .+ ..|+ .
T Consensus 202 ~t~~~~~~a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~~-------------~~G~--------~t---tLGR-G 256 (521)
T PLN02551 202 ITTDDFTNADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKGW-------------KTGA--------IT---TLGR-G 256 (521)
T ss_pred EecCCCCccchhhhhHHHHHHHHHhhhccCCeEEEEcCccccCC-------------CCCc--------EE---ecCC-C
Confidence 56666654322111122333333 3568999987311110 1121 11 1133 7
Q ss_pred chhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcC
Q 004665 198 DNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG 276 (738)
Q Consensus 198 ~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~g 276 (738)
.||+.|+.+|.+|+|+.+.+||||||||+.||+ .|+++.|++|+++|+.++-.+|++ .-+.++...+.+++
T Consensus 257 GSD~sA~~la~~L~A~~v~I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~Gak--------Vlhp~ai~pa~~~~ 328 (521)
T PLN02551 257 GSDLTATTIGKALGLREIQVWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFGAQ--------VLHPQSMRPAREGD 328 (521)
T ss_pred hHHHHHHHHHHHcCCCEEEEEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCCCc--------ccCHHHHHHHHHCC
Confidence 899999999999999999999999999999996 999999999999999965445543 24567888999999
Q ss_pred CcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 277 IPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 277 i~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
||++|.|.+.|+ ..||+|...
T Consensus 329 Ipi~vknt~~p~---------~~GT~I~~~ 349 (521)
T PLN02551 329 IPVRVKNSYNPT---------APGTLITKT 349 (521)
T ss_pred ceEEEEecCCCC---------CCCcEEecc
Confidence 999999987763 358888654
No 211
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=99.66 E-value=1.1e-15 Score=183.10 Aligned_cols=240 Identities=18% Similarity=0.202 Sum_probs=160.4
Q ss_pred EEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccC-C--cc------------
Q 004665 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-S--LA------------ 81 (738)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~-~--~~------------ 81 (738)
.|.||||+++.+. +++.++++.|+...+. .++|+|++.-..++..++........ . ..
T Consensus 2 ~V~KFGGtSv~~~------~~i~~v~~iI~~~~~~-~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~~~~~~~h~~ 74 (819)
T PRK09436 2 RVLKFGGTSVANA------ERFLRVADIIESNARQ-EQVAVVLSAPAKVTNHLVAMIEKAAKGDDAYPEILDAERIFHEL 74 (819)
T ss_pred EEEEeCccccCCH------HHHHHHHHHHHhhccc-CCEEEEEcCCcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 5999999999874 3678888888766544 57788888865566543332211000 0 00
Q ss_pred --cc----cC---c-----------cc-----------cc---hHHHHHHhhhHHHHHHHHHHhhcCCCceeEE-----E
Q 004665 82 --DL----QK---P-----------QN-----------EL---DGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----L 122 (738)
Q Consensus 82 --~~----~~---~-----------~~-----------~l---~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~ 122 (738)
++ .. . ++ ++ ....+.+.|+.....++...|++.|+++..+ .
T Consensus 75 ~~~l~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i 154 (819)
T PRK09436 75 LDGLAAALPGFDLAQLKAKVDQEFAQLKDILHGISLLGECPDSVNAAIISRGERLSIAIMAAVLEARGHDVTVIDPRELL 154 (819)
T ss_pred HHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhheeeHHHHHHHHHHHHHHHhCCCCeEEECHHHeE
Confidence 00 00 0 00 00 1134457788777777899999999987553 3
Q ss_pred ecCCCCCcccc-cccHHHHHHHHH-hCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchh
Q 004665 123 VTDSDFRDEDF-RKQLYDTVQSLL-DLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDND 200 (738)
Q Consensus 123 ~~~~d~~~~~~-~~~~~~~i~~lL-~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D 200 (738)
+++.+|.+... .....+.|+.++ +.+.|||++|. ++.. ..|. ..+ .|+ ..||
T Consensus 155 ~t~~~~~~~~~~~~~~~~~i~~~~~~~~~v~Vv~Gf--ig~~------------~~G~--------~tt---lGR-gGSD 208 (819)
T PRK09436 155 LADGHYLESTVDIAESTRRIAASFIPADHVILMPGF--TAGN------------EKGE--------LVT---LGR-NGSD 208 (819)
T ss_pred EecCCCCCceechHhhHHHHHHHHhcCCcEEEecCc--ccCC------------CCCC--------EEE---eCC-CCch
Confidence 55555543222 111245566654 46889999872 1111 0111 011 123 6789
Q ss_pred hHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcE
Q 004665 201 SLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPV 279 (738)
Q Consensus 201 ~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v 279 (738)
++|+.+|..|+|+.|+++|||||||+.||+ +|++++|+++++.|+.+... .|-+..+.+++..|.++|||+
T Consensus 209 ~~A~~~A~~l~A~~~~i~tdVdGvyt~DP~~~~~A~~i~~isy~ea~el~~--------~G~kvlhp~a~~~a~~~~Ipi 280 (819)
T PRK09436 209 YSAAILAACLDADCCEIWTDVDGVYTADPRVVPDARLLKSLSYQEAMELSY--------FGAKVLHPRTIAPIAQFQIPC 280 (819)
T ss_pred HHHHHHHHHcCCCEEEEEECCCceECCCCCCCCCCeEeeEecHHHHHHHHh--------cCCccchHHHHHHHHHCCceE
Confidence 999999999999999999999999999995 89999999999999985433 244567899999999999999
Q ss_pred EEEeCccchhHHHhhcCceeEEEEccC
Q 004665 280 VITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 280 ~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
+|.|++.|+. .||++..+
T Consensus 281 ~i~n~~~p~~---------~GT~I~~~ 298 (819)
T PRK09436 281 LIKNTFNPQA---------PGTLIGAE 298 (819)
T ss_pred EEccCCCCCC---------CceEEEec
Confidence 9999988752 58888643
No 212
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=99.66 E-value=1.6e-15 Score=180.37 Aligned_cols=245 Identities=16% Similarity=0.137 Sum_probs=159.6
Q ss_pred hhccCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccCCcc-------c
Q 004665 10 FVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-------D 82 (738)
Q Consensus 10 ~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~~~~-------~ 82 (738)
+...++++|.||||+++.+.. +++++++.|+.-.+.+ +++|++.-..+....+........+.. .
T Consensus 6 ~~~~M~~~V~KFGGtSv~~~e------~i~~v~~iI~~~~~~~--~vVVVSA~~~~Td~L~~~~~~~~~~~~~~~~~l~~ 77 (810)
T PRK09466 6 QAGAMGRQLHKFGGSSLADAK------CYRRVAGILAEYSQPD--DLVVVSAAGKTTNQLISWLKLSQTDRLSAHQVQQT 77 (810)
T ss_pred ccccceeEEEEECccccCCHH------HHHHHHHHHhhhccCC--EEEEEcCCCCCHHHHHHHHHHhhcCchhHHHHHHH
Confidence 333455789999999998743 6788888877554433 666677755555543333221100000 0
Q ss_pred -----------ccC--cc----------------------ccchHHHHHHhhhHHHHHHHHHHhhcCCCceeEE-----E
Q 004665 83 -----------LQK--PQ----------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----L 122 (738)
Q Consensus 83 -----------~~~--~~----------------------~~l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~ 122 (738)
+.. .+ .......+.+.|+.....++..+|++.|+++..+ .
T Consensus 78 i~~~h~~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~d~ils~GE~~Sa~lla~~L~~~G~~a~~ld~~~~i 157 (810)
T PRK09466 78 LRRYQQDLIEGLLPAEQARSLLSRLISDLERLAALLDGGINDAQYAEVVGHGEVWSARLMAALLNQQGLPAAWLDARSFL 157 (810)
T ss_pred HHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHhhccCCchhhhheecHHHHHHHHHHHHHHHhCCCCcEEEcHHHhe
Confidence 000 00 0001234557788777778999999999987554 2
Q ss_pred ecCCCCCcccccccHHHHHHHHHhCC--ceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchh
Q 004665 123 VTDSDFRDEDFRKQLYDTVQSLLDLR--VIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDND 200 (738)
Q Consensus 123 ~~~~d~~~~~~~~~~~~~i~~lL~~g--~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D 200 (738)
.++..+..........+.++.+++.+ .|||+.|.-...+ .|. .++. |+ ..||
T Consensus 158 ~~~~~~~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~--------------~G~--------~ttL---GR-GGSD 211 (810)
T PRK09466 158 RAERAAQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNE--------------AGE--------TVLL---GR-NGSD 211 (810)
T ss_pred ecCCCCCcccchhhhHHHHHHHHhccCCeEEEeeCccccCC--------------CCC--------EEEc---CC-ChHH
Confidence 22222211111111256777777654 7999987311111 121 1111 23 7799
Q ss_pred hHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcE
Q 004665 201 SLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPV 279 (738)
Q Consensus 201 ~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v 279 (738)
+.|+.+|.+|+|+.+.|||||||||+.||+ .|++++|++|+++|+.++..+|++ .-+.++...+.+++||+
T Consensus 212 ~tA~~la~~l~A~~v~i~tDV~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Gak--------VlHp~ti~pa~~~~Ipi 283 (810)
T PRK09466 212 YSATLIGALAGVERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAP--------VLHARTLQPVSGSDIDL 283 (810)
T ss_pred HHHHHHHHHcCCCEEEEEeCCCccccCCcccCCCceEcccCCHHHHHHHHHcCcc--------ccCHHHHHHHHHcCCeE
Confidence 999999999999999999999999999996 899999999999999965555554 23567888999999999
Q ss_pred EEEeCccchhHHHhhcCceeEEEEcc
Q 004665 280 VITSGFAMDSIIKVLEGKRVGTLFHR 305 (738)
Q Consensus 280 ~I~~g~~~~~i~~~~tg~~iGTvi~~ 305 (738)
+|.|.+.|+ ..||++..
T Consensus 284 ~V~ntf~p~---------~~GT~I~~ 300 (810)
T PRK09466 284 QLRCSYQPE---------QGSTRIER 300 (810)
T ss_pred EEecCCCCC---------CCceEEec
Confidence 999988764 25888864
No 213
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional
Probab=99.66 E-value=8.6e-16 Score=185.93 Aligned_cols=235 Identities=18% Similarity=0.163 Sum_probs=156.0
Q ss_pred CCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccC-Cc----c-------
Q 004665 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-SL----A------- 81 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~-~~----~------- 81 (738)
++++|.||||+++.+.. .+.++++.|+.-.++|.++++|++.-+.++...+........ .. .
T Consensus 7 ~~~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~ 80 (861)
T PRK08961 7 DRWVVLKFGGTSVSRRH------RWDTIAKIVRKRLAEGGRVLVVVSALSGVSNELEAIIAAAGAGDSASRVAAIRQRHR 80 (861)
T ss_pred CCcEEEEECccccCCHH------HHHHHHHHHHhhcccCCCEEEEEeCCCCchHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 46789999999998743 588888888766566888888888866566543222110000 00 0
Q ss_pred ----cc--cCc----------cc---------cc---hHHHHHHhhhHHHHHHHHHHhhcCCCceeEE-----EecCCC-
Q 004665 82 ----DL--QKP----------QN---------EL---DGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVTDSD- 127 (738)
Q Consensus 82 ----~~--~~~----------~~---------~l---~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~-----~~~~~d- 127 (738)
.+ +.. .. .+ ....+.+.|+.....++..+|++.|+++..+ ..++.+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~~~~~~~~ 160 (861)
T PRK08961 81 ELLAELGVDAEAVLAERLAALQRLLDGIRALTRASLRWQAEVLGQGELLSTTLGAAYLEASGLDMGWLDAREWLTALPQP 160 (861)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccCChhhhheEEEehHHHHHHHHHHHHHhCCCCcEEEcHHHhEeecCcc
Confidence 00 000 00 00 0012235677666667889999999987543 333332
Q ss_pred -CCcccccc-------cHHHHHHHHHhCC-ceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecc
Q 004665 128 -FRDEDFRK-------QLYDTVQSLLDLR-VIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWD 198 (738)
Q Consensus 128 -~~~~~~~~-------~~~~~i~~lL~~g-~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~ 198 (738)
+.....+. ...+.++.+++.+ .|||+.|.-+... .|. .++. |+ ++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~--------------~g~--------~ttL---gr-gg 214 (861)
T PRK08961 161 NQSEWSQYLSVSCQWQSDPALRERFAAQPAQVLITQGFIARNA--------------DGG--------TALL---GR-GG 214 (861)
T ss_pred ccccccccccceecHhhHHHHHHHHhccCCeEEEeCCcceeCC--------------CCC--------EEEE---eC-Cc
Confidence 11111110 1145666677665 4999987311111 110 0111 22 88
Q ss_pred hhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCC
Q 004665 199 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI 277 (738)
Q Consensus 199 ~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi 277 (738)
||++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++|+.++.. .|+|.-+.+++..|.++||
T Consensus 215 sD~~A~~iA~~l~a~~~~i~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~el~~--------~g~~v~~~~a~~~a~~~~i 286 (861)
T PRK08961 215 SDTSAAYFAAKLGASRVEIWTDVPGMFSANPKEVPDARLLTRLDYDEAQEIAT--------TGAKVLHPRSIKPCRDAGI 286 (861)
T ss_pred hHHHHHHHHHHcCCCEEEEEeCCCccccCCCCCCCCceEecccCHHHHHHHHH--------CCCeEECHHHHHHHHHCCC
Confidence 99999999999999999999999999999995 89999999999999885443 4778889999999999999
Q ss_pred cEEEEeCccch
Q 004665 278 PVVITSGFAMD 288 (738)
Q Consensus 278 ~v~I~~g~~~~ 288 (738)
|++|.|++.|+
T Consensus 287 ~i~v~~~~~~~ 297 (861)
T PRK08961 287 PMAILDTERPD 297 (861)
T ss_pred CEEEEeCCCCC
Confidence 99999998774
No 214
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only]
Probab=99.56 E-value=2.3e-14 Score=135.71 Aligned_cols=121 Identities=22% Similarity=0.326 Sum_probs=94.9
Q ss_pred HHhCCceEEEeCCCceeccCCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccc
Q 004665 144 LLDLRVIPIFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEG 223 (738)
Q Consensus 144 lL~~g~iPVi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~G 223 (738)
-.+.+.+||+ +||.+++ +.+|.-|||. ++||.++.++|.++++.++++.|||||
T Consensus 89 ~i~~~~~aVL----------LPyrlLr-------~~DplpHSW~---------VTSDsis~~Ia~~~~~~~vv~aTDVdG 142 (212)
T COG2054 89 GIKPDAKAVL----------LPYRLLR-------KTDPLPHSWE---------VTSDSISVWIAAKAGATEVVKATDVDG 142 (212)
T ss_pred ccCcccceEe----------eehHhhh-------cCCCCCccee---------ecccHHHHHHHHHcCCcEEEEEecCCc
Confidence 3456778898 2344433 3578889994 899999999999999999999999999
Q ss_pred cccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCc-eeEEE
Q 004665 224 LYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK-RVGTL 302 (738)
Q Consensus 224 V~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~-~iGTv 302 (738)
||+.+| +++++++|+.+|+.. |. ..-++-.|+ .+.+.+++++|+||+.|+++..+..|+ .+||.
T Consensus 143 I~~~~~---~~kLv~eI~A~dl~~----~~---t~vD~~~P~-----Ll~k~~m~~~Vvng~~pervi~~lrGk~~v~T~ 207 (212)
T COG2054 143 IYEEDP---KGKLVREIRASDLKT----GE---TSVDPYLPK-----LLVKYKMNCRVVNGKEPERVILALRGKEVVGTL 207 (212)
T ss_pred ccccCC---cchhhhhhhHhhccc----Cc---ccccchhhH-----HHHHcCCceEEECCCCHHHHHHHHhccccceEE
Confidence 999875 568999999988762 11 123444554 467889999999999999999998885 46998
Q ss_pred Ecc
Q 004665 303 FHR 305 (738)
Q Consensus 303 i~~ 305 (738)
+..
T Consensus 208 Ivg 210 (212)
T COG2054 208 IVG 210 (212)
T ss_pred EeC
Confidence 864
No 215
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.37 E-value=7.7e-10 Score=122.75 Aligned_cols=244 Identities=15% Similarity=0.148 Sum_probs=167.2
Q ss_pred EEEEeeeeeeEEEEeC-CChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEec--C-CC
Q 004665 419 LEKTSCPLGVLLIVFE-SRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--S-RE 493 (738)
Q Consensus 419 ~~~~~~PlGVV~~I~p-~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~--~-~~ 493 (738)
.+.++.|.|+|+.|.| |-|.+.++.++.+|.+||..|+|+|...|.++..|++.+.+...+. +- ..+.++. + ..
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~-~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLA-DSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhh-hcEEEEEecCCch
Confidence 4677999999999999 5699999999999999999999999999999999999987642221 11 3456663 4 44
Q ss_pred hhhHhhhcCCCcCEEEeecCHHHHHHHHHhCC-CcEEEecCCc-CeEEEcCCCCHHHHHHHHHHHcccc-Cceeccccee
Q 004665 494 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVDKSANLDVAKNIVIDAKIDY-PAACNAMETL 570 (738)
Q Consensus 494 ~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~-~p~~lElGGk-~p~iV~~dADld~Aa~~iv~~~f~n-~G~C~a~~rv 570 (738)
++.+.+.. ..|+|+.+||.++.+.|.+... .+-.+.-|-| +-.|+..+++++++++.+..=.+.. .+.|.|++.+
T Consensus 160 ~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 160 ELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred HHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 56666653 4999999999999999977543 3444454554 6788888889999998887655544 4499999999
Q ss_pred EEe---ccccchHHHHHHHHHHHhcCceee-cC---Cc--------cc-----------ccc--c-----C--CCCCccc
Q 004665 571 LVH---KDLACNGALNELVVELQHEGVGLF-GG---PR--------AS-----------KLL--Q-----I--PETRLFH 615 (738)
Q Consensus 571 lV~---~~i~dd~f~~~l~~~~~~~~~~~~-g~---~~--------~~-----------~~~--p-----v--~~~~i~~ 615 (738)
||. ..-. ++|.++|.+++++..-.+- +. .. .. ..+ + | .+.....
T Consensus 238 fv~~g~~~~~-~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~ 316 (399)
T PF05893_consen 238 FVETGDGDSV-EEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPEPPLL 316 (399)
T ss_pred EEECCCcccH-HHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCCcccc
Confidence 999 2334 5888888777765421100 00 00 00 001 0 1 1111222
Q ss_pred cCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHH-hccee
Q 004665 616 HEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC-QVDSA 667 (738)
Q Consensus 616 eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~-~l~~G 667 (738)
..-++=.+.|.++++.+|++..+|....=-|.+++... ++...+++ -...|
T Consensus 317 ~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 317 PSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred cCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 22234488899999999999999987431466776444 45556665 33444
No 216
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism]
Probab=99.30 E-value=1.6e-11 Score=128.41 Aligned_cols=171 Identities=17% Similarity=0.248 Sum_probs=117.5
Q ss_pred HHHHhhhHHHHHHHHHHhhcCCCceeEEE------ecCCCCCccc-ccccHHHHHHHH----HhCCceEEEeCCCceecc
Q 004665 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSDFRDED-FRKQLYDTVQSL----LDLRVIPIFNENDAVSTR 162 (738)
Q Consensus 94 ~~~~~g~~~~~~~~~~~l~~~gi~~~~~~------~~~~d~~~~~-~~~~~~~~i~~l----L~~g~iPVi~g~~~v~~~ 162 (738)
.+.++|+....+.++..++..|..+.+.- ++..+|.+.. .+...+...+.+ ...+.+||+.|. ++
T Consensus 194 ~lvs~GE~lS~rf~aA~lnd~G~kar~~D~~~I~~~~~d~~t~~d~~~a~~~av~k~~~~~~aken~VPVvTGf--~G-- 269 (559)
T KOG0456|consen 194 YLVSFGECLSTRFFAAYLNDIGHKARQYDAFEIGFITTDDFTNDDILEATYPAVSKLLSGDWAKENAVPVVTGF--LG-- 269 (559)
T ss_pred HhhhhhhHHHHHHHHHHHHhcCccceeechhheeccccccccchhHHHHHHHHHHHhcccccccCCccceEeec--cc--
Confidence 34578888888889999999999888742 2223333211 111112222222 236889999762 11
Q ss_pred CCCcccccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-cCCccccceee
Q 004665 163 KAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYI 241 (738)
Q Consensus 163 ~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~~~a~~i~~i~ 241 (738)
+.++. |-....|+ +.+|..|+.||.+|++|.+.+|.|||||++.||+ .|.+++++.++
T Consensus 270 -----------------k~~~t---g~lt~lGR-G~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT 328 (559)
T KOG0456|consen 270 -----------------KGWPT---GALTTLGR-GGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLT 328 (559)
T ss_pred -----------------cCccc---cceecccC-CchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccC
Confidence 11111 11112234 7789999999999999999999999999999995 99999999999
Q ss_pred ccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 242 RAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 242 ~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
++|+.++--+|+. .-+..+...+.+..|||.|-|..+|- ..||++.++
T Consensus 329 ~dEAaELaYfGaq--------VlHP~sM~~~~~~~IPvRvKN~~NP~---------~~GTvI~~d 376 (559)
T KOG0456|consen 329 FDEAAELAYFGAQ--------VLHPFSMRPAREGRIPVRVKNSYNPT---------APGTVITPD 376 (559)
T ss_pred HHHHHHHHhhhhh--------hccccccchhhccCcceEeecCCCCC---------CCceEeccc
Confidence 9999854445543 23344556788889999999877663 358888876
No 217
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=99.29 E-value=2.6e-11 Score=127.39 Aligned_cols=156 Identities=16% Similarity=0.143 Sum_probs=108.8
Q ss_pred HHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHh----CCceEEEeCCCceeccCCCcccc
Q 004665 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLD----LRVIPIFNENDAVSTRKAPYEVT 169 (738)
Q Consensus 94 ~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~----~g~iPVi~g~~~v~~~~~~~~~~ 169 (738)
.+.++|+.....++...|++.|+++.-+-.+. +........ .+.|...++ .+.|||+.|. . ..
T Consensus 135 ~l~S~GE~~Sa~l~a~~L~~~Gi~A~~vD~~~--~~~~~~~t~-~~~i~~~~~~~~~~~~v~IvtGF-~-~~-------- 201 (304)
T cd04248 135 LLASLGEAHSAFNTALLLQNRGVNARFVDLSG--WRDSGDMTL-DERISEAFRDIDPRDELPIVTGY-A-KC-------- 201 (304)
T ss_pred HHhhhCHHHHHHHHHHHHHHCCCCeEEECccc--ccccCCCCc-HHHHHHHHHhhccCCcEEEeCCc-c-CC--------
Confidence 55678887666678899999999876432221 110000111 233444333 6789999873 1 11
Q ss_pred cccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-c--CCccccceeeccchH
Q 004665 170 HKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQ 246 (738)
Q Consensus 170 ~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~--~~a~~i~~i~~~e~~ 246 (738)
..|. ..+. |+ +.||+.|+.||.+|+|+.+.|+|||+ ||+.||+ . ++++.|++++++|+.
T Consensus 202 -----~~G~--------itTL---GR-GGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~~lsY~EA~ 263 (304)
T cd04248 202 -----AEGL--------MREF---DR-GYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIGRTNYDVAD 263 (304)
T ss_pred -----CCCC--------EEEc---CC-CcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeCccCHHHHH
Confidence 0121 1111 23 78999999999999999999999995 9999996 5 689999999999999
Q ss_pred HHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccch
Q 004665 247 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 288 (738)
Q Consensus 247 ~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 288 (738)
++-.+|++ .-..+++..+.+++||++|.|.++|+
T Consensus 264 ELA~~Gak--------vLHP~ai~pa~~~~IPi~Vkntf~P~ 297 (304)
T cd04248 264 QLANLGME--------AIHPKAAKGLRQAGIPLRVKNTFEPD 297 (304)
T ss_pred HHHHcChh--------hcCHHHHHHHHHcCCeEEEecCCCCC
Confidence 65444433 23567889999999999999988774
No 218
>PRK09181 aspartate kinase; Validated
Probab=99.27 E-value=3.7e-11 Score=135.54 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=118.8
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCCCceeEEEecCCCCCcccccccHHHHHHHHHh----CCceEEEeCCCceeccCCCccc
Q 004665 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLD----LRVIPIFNENDAVSTRKAPYEV 168 (738)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~----~g~iPVi~g~~~v~~~~~~~~~ 168 (738)
..+.+.|+.....++..+|++.|+++.-+-.+. +....... ..+.|...++ .+.|||+.|. ....
T Consensus 140 D~l~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~--~~~~~~~~-~~~~i~~~l~~~~~~~~v~Vv~GF--~~~~------ 208 (475)
T PRK09181 140 EMLASIGEAHSAFNTALLLQNRGVNARFVDLTG--WDDDDPLT-LDERIKKAFKDIDVTKELPIVTGY--AKCK------ 208 (475)
T ss_pred HHHhhHhHHHHHHHHHHHHHhCCCCeEEecccc--ccCCcccc-hHHHHHHHHhhhccCCcEEEecCC--cCCC------
Confidence 355678887777788999999999876532221 11111111 2455666665 5789999873 1110
Q ss_pred ccccccccccccccccccccccCCCceecchhhHHHHHHhhcCCCEEEeeccccccccCCcc-c--CCccccceeeccch
Q 004665 169 THKDTSLENYLKPFRSSFLCFYDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKH 245 (738)
Q Consensus 169 ~~~~~~~~g~~~p~~~~~~~~~~~~g~~i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP~-~--~~a~~i~~i~~~e~ 245 (738)
.|. +++ .|| ..||+.|+.+|.+|+|+.+.+||||+ ||+.||+ . |+++.|++|+++|+
T Consensus 209 -------~G~--------itT---LGR-GGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i~~lsy~Ea 268 (475)
T PRK09181 209 -------EGL--------MRT---FDR-GYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPIGRTNYDVA 268 (475)
T ss_pred -------CCC--------EEe---cCC-ChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEcCccCHHHH
Confidence 121 111 234 78999999999999999999999997 9999996 5 79999999999999
Q ss_pred HHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHhhcCceeEEEEccC
Q 004665 246 QAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 306 (738)
Q Consensus 246 ~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~~tg~~iGTvi~~~ 306 (738)
.++-.+|++ .-..++...+.+++||++|.|.+.|+ ..||++...
T Consensus 269 ~ELA~~GAk--------VLHp~ti~pa~~~~Ipi~V~nt~~p~---------~~GT~I~~~ 312 (475)
T PRK09181 269 DQLANLGME--------AIHPKAAKGLRQAGIPLRIKNTFEPE---------HPGTLITKD 312 (475)
T ss_pred HHHHHcCch--------hcCHHHHHHHHHcCCeEEEecCCCCC---------CCCeEEecC
Confidence 965445544 24567889999999999999988764 259998654
No 219
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism]
Probab=98.78 E-value=2.1e-08 Score=109.56 Aligned_cols=243 Identities=22% Similarity=0.246 Sum_probs=137.7
Q ss_pred cCCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHHHhcccccccC---CcccccCcccc
Q 004665 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS---SLADLQKPQNE 89 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~~l~~~~~~~~---~~~~~~~~~~~ 89 (738)
..+.+|+|-|+..+++. ++.++.+++.|...|.+.|||||+++++++ .++..+++.. ..+..+...+.
T Consensus 94 ~q~fvV~~~g~~~~t~~--------~~sl~s~lafl~h~gl~pIvv~g~~~qin~-~l~~~~ie~~y~~~~RvTda~t~q 164 (520)
T KOG2436|consen 94 DQKFVVIKSGEAISTSL--------LHSLASDLAFLHHVGLRPIVVPGTQPQINR-LLAERGIEPEYVDGYRVTDAHTLQ 164 (520)
T ss_pred CceEEEEecccccccch--------HHHHHHHHHHHhcCCceEEEecCccHHHHH-HHHHcCCCcccccceecccHHHHH
Confidence 33455555555554443 689999999999999999999999999998 4555555431 11111111111
Q ss_pred chHHHHHHhhhHHHHHHHHHHhhcCCCceeEE---------EecC-------CCCC--cccccccHHHHHHHHHhCCceE
Q 004665 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQL---------LVTD-------SDFR--DEDFRKQLYDTVQSLLDLRVIP 151 (738)
Q Consensus 90 l~~~~~~~~g~~~~~~~~~~~l~~~gi~~~~~---------~~~~-------~d~~--~~~~~~~~~~~i~~lL~~g~iP 151 (738)
+.++ .-.++..+. +-..|+++|-..+.. ...+ .+|. +.....+ .+.|..+++.|.+|
T Consensus 165 ~~~~--~~~~E~n~~--lv~nL~~~g~~ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd-~d~i~~l~~~G~mp 239 (520)
T KOG2436|consen 165 AAKE--SVSLEANLN--LVINLSQLGTRARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVD-VDRIRHLLDAGSMP 239 (520)
T ss_pred Hhhh--cchhhhhhH--HHHHHHHhhceeccccccccccceeecccccccccceeeeecccceec-hhhhhhhhhCCCch
Confidence 1111 011111111 113344444322211 1001 1121 2223344 78899999999999
Q ss_pred EEeCCCceeccCCCcccccccccccccccccccccccccCCCce-e-cchhhHHHHHHhhcCCCEEEeeccccccccCCc
Q 004665 152 IFNENDAVSTRKAPYEVTHKDTSLENYLKPFRSSFLCFYDSSGI-F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP 229 (738)
Q Consensus 152 Vi~g~~~v~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~g~-~-i~~D~~A~~lA~~L~A~~li~~TdV~GV~~~dP 229 (738)
++.- ++ | +..|. + +|+|.+|..+|..|+|+++++++|+ |...+
T Consensus 240 ~L~s---la---------~--------------------TaSGqvlnvNa~~~a~elA~~L~~~kli~l~d~-g~~l~-- 284 (520)
T KOG2436|consen 240 LLRS---LA---------A--------------------TASGQVLNVNADEVAGELALALGPDKLILLMDK-GRILK-- 284 (520)
T ss_pred hehh---hc---------c--------------------cCccceEEeeHHHHhhHHHhccCcceeEEeccc-ccccc--
Confidence 9931 11 1 12233 3 9999999999999999999999998 44432
Q ss_pred ccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHH-HhhcCceeEEEEccC
Q 004665 230 SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSII-KVLEGKRVGTLFHRD 306 (738)
Q Consensus 230 ~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~-~~~tg~~iGTvi~~~ 306 (738)
.+++.++.++..|....+........++.+|..++.....+..-+.+-+.+......+.. ..+++...||.+...
T Consensus 285 --e~ge~~S~l~l~~e~~~l~k~~qq~~~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~g 360 (520)
T KOG2436|consen 285 --ENGEDISSLILQEEDAGLRKPSQQKNIAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISGG 360 (520)
T ss_pred --cCcccccccccchhHhhhhhhhhhcccccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccCc
Confidence 246778888777655444433333566777877776665542222212333333343333 356665567766643
No 220
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=98.76 E-value=3.3e-09 Score=96.39 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=65.4
Q ss_pred CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCC
Q 004665 609 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 676 (738)
Q Consensus 609 ~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~ 676 (738)
|.|.++.||+||||+..+.-+++||||.++|.++||-...|||.|.+.++++++..++|.+.+|.+..
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999998653
No 221
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=98.42 E-value=2.2e-06 Score=85.53 Aligned_cols=134 Identities=15% Similarity=0.158 Sum_probs=98.6
Q ss_pred EEEcCCCCHHHHHHHHHHHccccCceecccceeEEeccccchHHHHHHHHHHHhcCcee--------------------e
Q 004665 538 VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGL--------------------F 597 (738)
Q Consensus 538 ~iV~~dADld~Aa~~iv~~~f~n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~--------------------~ 597 (738)
+||++|.||+.|+..++.+. .|.=...+.--|+|||+|. |+|++++..+++.+.-.+ .
T Consensus 8 MIvfe~GDlnsA~~~L~~sl-~~Pf~~~~VatVlVqEsir-eefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~~I 85 (215)
T PF07368_consen 8 MIVFEDGDLNSAMHYLLESL-HNPFAPGAVATVLVQESIR-EEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAKTI 85 (215)
T ss_pred EEEEeCCCHHHHHHHHHHHH-hCcccCCcEEEEEEeHHHH-HHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCeEE
Confidence 89999999999999999874 3332344667899999999 799999999887653211 1
Q ss_pred -cCCcccc--ccc-CCCCCccccCcc----cceEEEEEeCCHHHHHHHHHcC--CCCcEEEEEecCHHHHHHHHHhccee
Q 004665 598 -GGPRASK--LLQ-IPETRLFHHEYN----SMVCTVEIVDDVRAAIDHIHQH--GSAHTDCIVAEDQKVAETFLCQVDSA 667 (738)
Q Consensus 598 -g~~~~~~--~~p-v~~~~i~~eE~F----GPVl~v~~~~~~dEAi~~aN~~--~~GLsa~VfT~d~~~a~~~~~~l~~G 667 (738)
++..... --| +.. -+..-.| .+|+++-.|++..||+++++.. +|+ +.|||++-...+..++.++++-
T Consensus 86 ~~~~~~~~~~aSPilV~--d~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~~~ 162 (215)
T PF07368_consen 86 VADFENVPPPASPILVC--DFTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLPCD 162 (215)
T ss_pred EecccCCCCCCCCEEEc--CCCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCCCC
Confidence 1100000 002 100 0122223 3599999999999999999964 666 9999999999999999999999
Q ss_pred EEEECCCCC
Q 004665 668 AVFHNASTR 676 (738)
Q Consensus 668 ~V~iN~~~~ 676 (738)
.++||+...
T Consensus 163 ~f~iNC~~V 171 (215)
T PF07368_consen 163 TFYINCFNV 171 (215)
T ss_pred EEEEEeccC
Confidence 999998653
No 222
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=97.79 E-value=6.9e-05 Score=93.69 Aligned_cols=102 Identities=13% Similarity=0.190 Sum_probs=75.7
Q ss_pred CCceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecCCCh
Q 004665 415 DGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREE 494 (738)
Q Consensus 415 ~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~ 494 (738)
.|.....+..|.|+|++|+||... ....++.||++||+||+||+++++. .++. +|..+.+.+.
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~~~-~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~~-----Lp~~~~~~~~---- 1130 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTEEA-LLRQLAAALATGNVAVVAADSGLAA-------ALAD-----LPGLVAARID---- 1130 (1208)
T ss_pred CCcceeEEecCCceEEEECCcHHH-HHHHHHHHHHhCCEEEEeCCcccHH-------HHHh-----Cccccccccc----
Confidence 455667788999999999999743 4457788999999999999999762 2221 7776666553
Q ss_pred hhHhhhcCCCcCEEEeecCHHHHHHHHHhC----C--CcEEEecC
Q 004665 495 IPDLLKLDDVIDLVIPRGSNKLVSQIKEST----K--IPVLGHAD 533 (738)
Q Consensus 495 ~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a----~--~p~~lElG 533 (738)
++..+..+++|+.|.||||+.+.+.+.++. + .|++.|..
T Consensus 1131 ~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1131 WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 233456677899999999999999886553 2 56666664
No 223
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=96.71 E-value=0.65 Score=51.59 Aligned_cols=281 Identities=16% Similarity=0.160 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHhhccccc-cccccccccCCCceEEEEeeeeeeEEEEeCC----ChHHHHHHHHHHHHhCCE--EEEe
Q 004665 385 GKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLK 457 (738)
Q Consensus 385 ~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--VVlK 457 (738)
+-++.+.++++.|.....+. ..... ...|.....++.|+--|++..|- +|-..++.++||-.||.. |+.-
T Consensus 68 ~Ai~~A~~~I~~fh~~q~~~~~~~~~---~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~T 144 (412)
T PF00815_consen 68 EAIEQAAENIRAFHEAQLPKKDWEVE---TEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCT 144 (412)
T ss_dssp HHHHHHHHHHHHHHHTT-----EEEE---EETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEE---ecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEc
Confidence 34566777777776433321 11111 12466777889999999999992 455567888899999965 4555
Q ss_pred CCcc----cHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhhh----cCCCcCEEEeecCHH--HHHHHHHh-CC
Q 004665 458 GGKE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNK--LVSQIKES-TK 525 (738)
Q Consensus 458 pse~----tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l~----~~~~vd~V~fTGS~~--~g~~i~~~-a~ 525 (738)
|... .|.+ |+-+ + =.|+=.+.. ||...-++|. +=|+||+|+=-|..= .+|+.... .+
T Consensus 145 Pp~~~G~i~p~v---L~Aa-~-------~~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ 213 (412)
T PF00815_consen 145 PPPKDGKINPAV---LAAA-H-------LAGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVG 213 (412)
T ss_dssp -SS------HHH---HHHH-H-------HTT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-E
T ss_pred CCCccCCCCHHH---HHHH-H-------HcCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcc
Confidence 5433 3332 2211 1 114444554 5433222222 237899999888753 34444332 12
Q ss_pred CcEEEecCCcC--eEEEcCCCCHHHHHHHHHHHccccCc-eecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcc
Q 004665 526 IPVLGHADGIC--HVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRA 602 (738)
Q Consensus 526 ~p~~lElGGk~--p~iV~~dADld~Aa~~iv~~~f~n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~ 602 (738)
+-. +-|-+ -+|-|++||.+..+..++.=+=.... .| ++|..+ .++.+++.+++.+.-..+ ++.
T Consensus 214 ID~---~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~a~~-----vLvt~s---~~la~~V~~~v~~~l~~l---~r~ 279 (412)
T PF00815_consen 214 IDM---IAGPSEVLVIADETANPEFVAADLLAQAEHDPDAQA-----VLVTTS---EELAEAVEAEVERQLEEL---PRR 279 (412)
T ss_dssp ES---------EEEEEE-TTS-HHHHHHHHHHHHTT-TT-EE-----EEEES----HHHHHHHHHHHHHHHTT----TTH
T ss_pred cCC---CCCCCceEEEECCCCCHHHHHHHHHHHhccCCCCce-----EEEECC---HHHHHHHHHHHHHHHHhC---Cch
Confidence 211 11222 24556789999887776643332222 22 334332 244445544444320000 111
Q ss_pred cccccCCCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHh-cceeEEEECCCCCC----
Q 004665 603 SKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF---- 677 (738)
Q Consensus 603 ~~~~pv~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~-l~~G~V~iN~~~~~---- 677 (738)
. +. ++.+. --.++.++|++||++++|.-- +=-..|.++|... +..+ -.+|.|++...+..
T Consensus 280 ~---------i~-~~sl~-~g~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~~~---~~~~i~~AGaiFlG~~tp~a~GD 344 (412)
T PF00815_consen 280 E---------IA-EKSLE-NGAIIVVDSLEEAIELANEYA-PEHLELQVEDPEE---LLEKIRNAGAIFLGEYTPEALGD 344 (412)
T ss_dssp H---------HH-HHHHT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHHH---HGGG--S-SEEEESTT--HHHHH
T ss_pred H---------HH-HHHHH-CCeEEEECCHHHHHHHHHHhh-HHHHHHHHcCHHH---HHHHhhccChhhcCCCCCHHHhh
Confidence 0 11 22223 334777899999999999865 3356788999743 4443 46899999875521
Q ss_pred ---CCCCcccCccccccccccccccchhHHhhcceeeEEEE
Q 004665 678 ---CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 715 (738)
Q Consensus 678 ---~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~~ 715 (738)
.++.-++. +|.. +..|..+...|...-++..
T Consensus 345 Y~aGpNHvLPT---~G~A----R~~sgLsv~~FlK~~s~~~ 378 (412)
T PF00815_consen 345 YAAGPNHVLPT---GGTA----RFSSGLSVDDFLKRISVQR 378 (412)
T ss_dssp HTSSS---------TTGG----GT---S-GGGGEEEEEEEE
T ss_pred hccCCCccCCC---Cccc----cccCCCcHHHccceeeEEE
Confidence 11111111 1211 2346667788887766543
No 224
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=95.74 E-value=4.3 Score=44.98 Aligned_cols=249 Identities=14% Similarity=0.158 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC----ChHHHHHHHHHHHHhCCE--EEEeCC
Q 004665 386 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 459 (738)
Q Consensus 386 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--VVlKps 459 (738)
-++.+.++++.|.....+...... ...|.....++.|+--|++..|- +|-..++.++||-.||+. |+.-|.
T Consensus 56 ai~~A~~nI~~fh~~q~~~~~~~~---~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 56 AIELAAENIRAFHEAQLPKDWEVE---TEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEE---eCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 455666777776543222211111 12467778889999999999993 455567788899999975 444554
Q ss_pred c----ccHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhhh----cCCCcCEEEeecCHHH--HHHHHHhCCCcE
Q 004665 460 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKESTKIPV 528 (738)
Q Consensus 460 e----~tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l~----~~~~vd~V~fTGS~~~--g~~i~~~a~~p~ 528 (738)
. -.|.+- .-+++ .|+=.+.. |+...-++|. +-|+||+|+=-|..=+ +|+....- .-+
T Consensus 133 ~~~g~i~p~iL-~aa~~----------~Gv~eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~-V~I 200 (390)
T cd06572 133 RKDGKINPAIL-AAAKL----------AGVDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGD-VGI 200 (390)
T ss_pred CCCCCCCHHHH-HHHHH----------cCCcEEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCC-cCc
Confidence 3 233321 11222 14445555 5543333332 3678999988887543 33332211 111
Q ss_pred EEecCCcCe--EEEcCCCCHHHHHHHHHHHccc--cCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcccc
Q 004665 529 LGHADGICH--VYVDKSANLDVAKNIVIDAKID--YPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASK 604 (738)
Q Consensus 529 ~lElGGk~p--~iV~~dADld~Aa~~iv~~~f~--n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~ 604 (738)
=+ +-|-+= +|-|++||.+..+..++.=+=. +++ -++|..+ .++.+++.+++++.-..+ ++.
T Consensus 201 D~-~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~a~------aiLvT~s---~~la~~V~~~v~~ql~~l---~r~-- 265 (390)
T cd06572 201 DM-PAGPSEVLVIADETANPEFVAADLLSQAEHDPDSQ------AILVTTS---EELAEAVEEEVERQLAEL---PRR-- 265 (390)
T ss_pred cC-CCCCceEEEEeCCCCCHHHHHHHHHhhhccCCCCe------EEEEECC---HHHHHHHHHHHHHHHHhC---CcH--
Confidence 11 112222 4446669999987776543222 222 1344332 344445544444321000 111
Q ss_pred cccCCCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCC
Q 004665 605 LLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST 675 (738)
Q Consensus 605 ~~pv~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~ 675 (738)
.+.+ +...---.++-++|+|||++++|..- +--.-|+++|... .+.+=-.+|.|++-..+
T Consensus 266 -------~~~~-~~~~~~g~ii~~~~~~eai~~~N~~A-PEHLel~~~~~~~--~l~~i~nAGsiFlG~~t 325 (390)
T cd06572 266 -------EIAA-KSLLDYGAIILVDDLEEAIELANEYA-PEHLELQTEDPEE--LLEKIRNAGSIFLGPYT 325 (390)
T ss_pred -------HHHH-HHHHhCCEEEEECCHHHHHHHHHhhc-hhhheeHhcCHHH--HHhhCccceEEeecCCC
Confidence 0111 11111223567899999999999864 3345788888754 23334578999997654
No 225
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=95.33 E-value=6.2 Score=44.15 Aligned_cols=279 Identities=15% Similarity=0.144 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC----ChHHHHHHHHHHHHhCCE--EEEeCC
Q 004665 386 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 459 (738)
Q Consensus 386 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--VVlKps 459 (738)
-++.+.++++.|.....+...... ...|.....++.|+--|++..|. +|-..++.++||-.||+. |+.-|.
T Consensus 84 ai~~A~~~I~~Fh~~q~~~~~~~~---~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 84 ALEEAAENIRAFHEAQKPESWDVE---TAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEE---ecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 455666677776543222111110 12466667889999999999994 565667888899999975 444554
Q ss_pred c---ccHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhh----hcCCCcCEEEeecCHH--HHHHHHHh-CCCcE
Q 004665 460 K---EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNK--LVSQIKES-TKIPV 528 (738)
Q Consensus 460 e---~tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~vd~V~fTGS~~--~g~~i~~~-a~~p~ 528 (738)
. -.|.+- .-+++ .|+=.+.. ||...-++| .+=|+||+|+=-|..= .+|+.... .++-.
T Consensus 161 ~~g~i~p~vL-~AA~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 229 (425)
T PRK00877 161 PDGEINPAIL-AAAAL----------AGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGIDM 229 (425)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcCC
Confidence 2 233321 11222 24444444 554322233 2347899999888753 34443221 11211
Q ss_pred EEecCCcCe--EEEcCCCCHHHHHHHHHHHcccc--Cc-eecccceeEEeccccchHHHHHHHHHHHhcCceeecCCccc
Q 004665 529 LGHADGICH--VYVDKSANLDVAKNIVIDAKIDY--PA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRAS 603 (738)
Q Consensus 529 ~lElGGk~p--~iV~~dADld~Aa~~iv~~~f~n--~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~ 603 (738)
+-|-+= +|-|++||.+..+..++.=+=.. ++ .+.+.+ ++++ ++..+.+.+.++.+ ++.
T Consensus 230 ---~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~a~aiLvT~s-----~~la-~~V~~~v~~ql~~l-------~r~- 292 (425)
T PRK00877 230 ---IAGPSEILVIADETADPDFVAADLLSQAEHDPDAQSILVTTS-----EELA-EAVAAEVERQLATL-------PRA- 292 (425)
T ss_pred ---CCCCceeEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECC-----HHHH-HHHHHHHHHHHHhC-------ChH-
Confidence 123222 34456699999887766433222 23 332222 2333 23333333333322 110
Q ss_pred ccccCCCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCCCC------
Q 004665 604 KLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF------ 677 (738)
Q Consensus 604 ~~~pv~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~~~------ 677 (738)
.+. ...+ |-||= |+-++|+|||++++|.-- +=-..|.++|.... +.+=-.+|.|++-..+..
T Consensus 293 ~ia----~~sl--~~~g~---iivv~~leeai~~~N~~A-PEHLel~~~~p~~~--l~~I~nAGaiFlG~~tp~a~GDY~ 360 (425)
T PRK00877 293 EIA----RASL--EGQGA---IILVDDLEEAIELSNAYA-PEHLEIQTEDPRAL--LDRIRNAGAIFLGPYTPESLGDYA 360 (425)
T ss_pred HHH----HHHH--HhCCE---EEEECCHHHHHHHHHhhC-hHheeehhCCHHHH--HhhcCccceeccCCCCchhhhhcc
Confidence 000 0011 22554 467899999999999864 23456888887542 233357899999654421
Q ss_pred -CCCCcccCccccccccccccccchhHHhhcceeeEEE
Q 004665 678 -CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 714 (738)
Q Consensus 678 -~~~~pfGgg~~sG~~~~~~~~~G~~g~~~ft~~K~v~ 714 (738)
.++.-++. +|.. +..|..+...|...-++.
T Consensus 361 aGpNHvLPT---~G~A----R~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 361 AGPNHVLPT---SGTA----RFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred cCCCcccCC---Ccce----eecCCccHHHhccceeEE
Confidence 11111111 1222 234667788887766654
No 226
>PLN02926 histidinol dehydrogenase
Probab=95.25 E-value=6.6 Score=43.98 Aligned_cols=248 Identities=14% Similarity=0.109 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHhhccccccc-cccccccCCCceEEEEeeeeeeEEEEeCC----ChHHHHHHHHHHHHhCCE--EEEeC
Q 004665 386 KISSLAKSIRILADMEEPIGQ-ILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKG 458 (738)
Q Consensus 386 ~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--VVlKp 458 (738)
-++.+.++++.|.....+... ... ..+|.....++.|+.-|++..|. +|-..++.++||-.||+. |+.-|
T Consensus 83 ai~~A~~nI~~fh~~q~~~~~~~~~---~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TP 159 (431)
T PLN02926 83 AFDVAYDNIYAFHLAQKSTEKLEVE---TMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATP 159 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCCcceEe---cCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEEC
Confidence 455666667766543222111 110 12466677889999999999994 455667888899999975 45555
Q ss_pred Ccc----cHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhh----hcCCCcCEEEeecCHHH--HHHHHHhCCCc
Q 004665 459 GKE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKESTKIP 527 (738)
Q Consensus 459 se~----tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~vd~V~fTGS~~~--g~~i~~~a~~p 527 (738)
... .|.+ |+-. + =.|+=.+.. |+...-++| .+=|+||+|+=-|..=| +|+... +.+
T Consensus 160 p~~~g~i~p~i---L~AA-~-------~~Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--G~~ 226 (431)
T PLN02926 160 PRKDGSICPEV---LYCA-K-------KAGVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQ--NSE 226 (431)
T ss_pred CCcCCCCCHHH---HHHH-H-------HcCCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhh--CCC
Confidence 532 3332 2211 1 124444554 554322222 23478999998887543 444321 221
Q ss_pred --EEE-ecCCcCe--EEEcCCCCHHHHHHHHHHHccccCceecccceeEEec--cccchHHHHHHHHHHHhcCceeecCC
Q 004665 528 --VLG-HADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHK--DLACNGALNELVVELQHEGVGLFGGP 600 (738)
Q Consensus 528 --~~l-ElGGk~p--~iV~~dADld~Aa~~iv~~~f~n~G~C~a~~rvlV~~--~i~dd~f~~~l~~~~~~~~~~~~g~~ 600 (738)
|-. -+-|-+= +|-|++||.+.++..++.=+=.... ..-++|.. ++. ++..+.+...++.+ +
T Consensus 227 ~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAEHdp~----a~aiLvT~s~~la-~~V~~~v~~ql~~l-------~ 294 (431)
T PLN02926 227 AMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAEHGPD----SQVVLVAVGDVDL-DAIEEEVEKQCQSL-------P 294 (431)
T ss_pred CccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECCHHHH-HHHHHHHHHHHHhC-------C
Confidence 111 1123332 3445569999988776643322211 11133433 233 23333333333332 1
Q ss_pred cccccccCCCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHhcceeEEEECCCC
Q 004665 601 RASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST 675 (738)
Q Consensus 601 ~~~~~~pv~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~ 675 (738)
+. .+. ++.+.- -.|+-++|+|||++++|.-- +--.-|+++|.... +.+=-.+|.|++-..+
T Consensus 295 r~---------~i~-~~sl~~-g~iivv~~l~ea~~~~N~~A-PEHLei~~~~~~~~--l~~i~nAGaiFlG~~s 355 (431)
T PLN02926 295 RG---------EIA-SKALGH-SFIVVARDMAEAISFSNLYA-PEHLIVNVEDAESW--LDKIDNAGSVFLGRWT 355 (431)
T ss_pred hH---------HHH-HHHHHC-CEEEEECCHHHHHHHHHhhC-hHhheehhcCHHHH--HhhcCccceeccCCCC
Confidence 11 111 222222 45678999999999999864 22345888887542 2233568999996544
No 227
>PRK13770 histidinol dehydrogenase; Provisional
Probab=94.88 E-value=8.1 Score=43.06 Aligned_cols=244 Identities=11% Similarity=0.109 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC----ChHHHHHHHHHHHHhCCEEE--EeCC
Q 004665 386 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLL--LKGG 459 (738)
Q Consensus 386 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNtVV--lKps 459 (738)
-++.+.++++.|.....+.. +....|.....++.|+--|++..|- +|-..++.++||-.||+.=| .-|.
T Consensus 76 ai~~A~~nI~~fh~~q~~~~-----~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 150 (416)
T PRK13770 76 ALQQSYERIKAYQESIKQTN-----QQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPP 150 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----eEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCc
Confidence 45566666776653222211 1112455667789999999999993 56566788889999998644 4444
Q ss_pred cc---cHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhh----hcCCCcCEEEeecCHHH--HHHHHHh-CCCcE
Q 004665 460 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 528 (738)
Q Consensus 460 e~---tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~vd~V~fTGS~~~--g~~i~~~-a~~p~ 528 (738)
.. .|.+- .-+++ .|+=.+.. |+...-++| .+=|+||+|+=-|..=| +|+.... .++-.
T Consensus 151 ~~~~i~p~iL-~Aa~~----------~Gv~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 219 (416)
T PRK13770 151 QPNGVSQEVL-AACYI----------TQVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQ 219 (416)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcCC
Confidence 32 33321 11222 14444444 553322222 23478999987777533 3432211 11221
Q ss_pred EEecCCcCe--EEEcCCCCHHHHHHHHHHHccc--cCc-eecccceeEEeccccchHHHHHHHHHHHhcCceeecCCccc
Q 004665 529 LGHADGICH--VYVDKSANLDVAKNIVIDAKID--YPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRAS 603 (738)
Q Consensus 529 ~lElGGk~p--~iV~~dADld~Aa~~iv~~~f~--n~G-~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~ 603 (738)
+-|-+= +|-|++||.+..+..++.=+=. +++ .+++.+ +++. ++..+.+...++.+ ++..
T Consensus 220 ---~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~a~~iLvT~s-----~~la-~~V~~ev~~ql~~l-------pr~~ 283 (416)
T PRK13770 220 ---IAGPTEIALIIDETADLDAIVYDVFAQAEHDELARTYVISED-----AQVL-KDLESRIAKALPNV-------DRYD 283 (416)
T ss_pred ---CCCCceeEEEecCCCCHHHHHHHHHHHhccCCCCcEEEEeCC-----HHHH-HHHHHHHHHHHHhC-------ChHH
Confidence 123222 4446679999987776643322 233 333332 3334 34444444444332 1100
Q ss_pred ccccCCCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHh-cceeEEEECCCC
Q 004665 604 KLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNAST 675 (738)
Q Consensus 604 ~~~pv~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~-l~~G~V~iN~~~ 675 (738)
+. ...+ |-|| .++-++|+|||++++|.---= -.-|.++|... +..+ -.+|.|++-..+
T Consensus 284 -i~----~~al--~~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGaiFlG~~s 342 (416)
T PRK13770 284 -IV----SKSI--ANQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQP---YIEKVKYVGALFIGHYS 342 (416)
T ss_pred -HH----HHHH--HhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHH---HHhhCCEeceeccCCCC
Confidence 00 0011 2244 346789999999999986422 34588888754 4444 468999996544
No 228
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=94.67 E-value=9.3 Score=42.78 Aligned_cols=249 Identities=15% Similarity=0.143 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC----ChHHHHHHHHHHHHhCCE--EEEeCC
Q 004665 386 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 459 (738)
Q Consensus 386 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--VVlKps 459 (738)
-++.+.++++.|.....+....... ....|.....++.|+--|++..|- +|-..++.++||-.||+. |+.-|.
T Consensus 77 ai~~A~~nI~~fh~~q~~~~~~~~~-~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 155 (426)
T PRK12447 77 DIRFAQDQVRRFAEAQRDSLQDLEV-ETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPP 155 (426)
T ss_pred HHHHHHHHHHHHHHHhcCCCCceEE-ecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 4556666777665322221100000 012466677889999999999993 565567788899999976 444454
Q ss_pred cc---cHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhh----hcCCCcCEEEeecCHHH--HHHHHHh-CCCcE
Q 004665 460 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 528 (738)
Q Consensus 460 e~---tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~vd~V~fTGS~~~--g~~i~~~-a~~p~ 528 (738)
.. .|.+ |+-. + =.|+=.+.. |+...-++| .+=|+||+|+=-|..=+ +|+.... .++-.
T Consensus 156 ~~~~i~p~i---L~Aa-~-------~~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 224 (426)
T PRK12447 156 FPGEPPPAI---VAAM-H-------LAGADEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDL 224 (426)
T ss_pred CCCCCCHHH---HHHH-H-------HcCCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCC
Confidence 32 3332 2211 1 124444444 553322222 23478999998887543 3443211 12221
Q ss_pred EEecCCcCe--EEEcCCCCHHHHHHHHHHHccccCceecccceeEEe--ccccchHHHHHHHHHHHhcCceeecCCcccc
Q 004665 529 LGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVH--KDLACNGALNELVVELQHEGVGLFGGPRASK 604 (738)
Q Consensus 529 ~lElGGk~p--~iV~~dADld~Aa~~iv~~~f~n~G~C~a~~rvlV~--~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~ 604 (738)
+-|-+= +|-|++||.+..+..++.=+=.... ..-++|. +++. ++..+++...++.+ ++..
T Consensus 225 ---~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a~~iLvT~s~~la-~~V~~~v~~ql~~l-------~r~~- 288 (426)
T PRK12447 225 ---FAGPTETLVIADDTADPELVATDLLGQAEHGPN----SPAVLITTSRKLA-EEVLAEIERLLAIL-------PTAD- 288 (426)
T ss_pred ---CCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CceEEEECCHHHH-HHHHHHHHHHHHhC-------CHHH-
Confidence 123222 4445669999887776643322211 0113333 2333 33333333333322 1110
Q ss_pred cccCCCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHh-cceeEEEECCCC
Q 004665 605 LLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNAST 675 (738)
Q Consensus 605 ~~pv~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~-l~~G~V~iN~~~ 675 (738)
+. ...+ |-+|= |+-++|+|||++++|.-- +=-..|.++|... +..+ -.+|.|++-..+
T Consensus 289 i~----~~sl--~~~g~---ii~v~~l~ea~~~~N~~A-PEHLel~~~~~~~---~l~~i~nAGaiFlG~~s 347 (426)
T PRK12447 289 VA----SAAW--RDYGE---VILCDDLEEMVAEADRYA-SEHVQVMTEDPDW---FLENMTNYGALFLGERT 347 (426)
T ss_pred HH----HHHH--HhCCE---EEEECCHHHHHHHHHhhC-hHheeehhCCHHH---HHhhcCccceeccCCCC
Confidence 00 0011 22443 467899999999999864 2234588888743 4443 468999996544
No 229
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=94.59 E-value=5.2 Score=44.25 Aligned_cols=245 Identities=17% Similarity=0.210 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC----ChHHHHHHHHHHHHhCCE--EEEeCC
Q 004665 386 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 459 (738)
Q Consensus 386 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--VVlKps 459 (738)
-++.+.++++.|-....+...... ...|.....++.|+--|++..|. +|-..++.++||-.||+. |+.-|.
T Consensus 52 ai~~A~~~I~~fh~~q~~~~~~~~---~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp 128 (393)
T TIGR00069 52 ALELAAENIRAFHEAQLPRSWEVE---TEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 128 (393)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEe---cCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 345556666665432222111111 13566777889999999999994 455567778899999975 444554
Q ss_pred c----ccHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhh----hcCCCcCEEEeecCHHH--HHHHHHh-CCCc
Q 004665 460 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIP 527 (738)
Q Consensus 460 e----~tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~vd~V~fTGS~~~--g~~i~~~-a~~p 527 (738)
. -.|.+- .-+++ .|+=.+.. |+...-++| .+=|+||+|+=-|..=+ +|+.... .++-
T Consensus 129 ~~~g~i~p~iL-~AA~~----------~Gv~eIy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~V~ID 197 (393)
T TIGR00069 129 GKDGKINPAVL-AAAKL----------AGVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGDVGID 197 (393)
T ss_pred CcCCCCCHHHH-HHHHH----------cCCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcC
Confidence 2 234321 11222 14444444 554322222 23478999988887543 4443211 1121
Q ss_pred EEEecCCcCe--EEEcCCCCHHHHHHHHHHHccccCceecccceeEEe--ccccchHHHHHHHHHHHhcCceeecCCccc
Q 004665 528 VLGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVH--KDLACNGALNELVVELQHEGVGLFGGPRAS 603 (738)
Q Consensus 528 ~~lElGGk~p--~iV~~dADld~Aa~~iv~~~f~n~G~C~a~~rvlV~--~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~ 603 (738)
. +-|-+= +|-|++||.+..+..++.=+=.... ..-++|. +++. ++..+.+...++.+ ++.
T Consensus 198 ~---~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~----a~~iLvT~s~~la-~~V~~~v~~ql~~l-------~r~- 261 (393)
T TIGR00069 198 M---PAGPSEVLVIADETANPEFVAADLLSQAEHDPD----AQAILVTTSEELA-EAVQEEIERQLATL-------PRR- 261 (393)
T ss_pred C---CCCCceEEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECCHHHH-HHHHHHHHHHHHhC-------ChH-
Confidence 1 123322 4446679999988776643322211 1113343 2333 34443443333332 111
Q ss_pred ccccCCCCCcccc--CcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHh-cceeEEEECCCC
Q 004665 604 KLLQIPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNAST 675 (738)
Q Consensus 604 ~~~pv~~~~i~~e--E~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~-l~~G~V~iN~~~ 675 (738)
.+.++ +-+|= |+-++|+|||++++|.-- +--.-|.++|... +..+ -.+|.|++-..+
T Consensus 262 --------~i~~~al~~~g~---ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~---~l~~I~nAGaiFlG~~t 321 (393)
T TIGR00069 262 --------EIARKSLEDNGA---IILVDDLEEAIEISNDYA-PEHLELQTKNPEE---LLPKIRNAGSIFLGPYT 321 (393)
T ss_pred --------HHHHHHHHhCCE---EEEECCHHHHHHHHHhhC-hHhheehhCCHHH---HHhhcCccceeccCCCC
Confidence 01111 11443 467899999999999864 2234578888754 4433 468999997654
No 230
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=93.66 E-value=7.1 Score=43.39 Aligned_cols=252 Identities=13% Similarity=0.189 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC----ChHHHHHHHHHHHHhCCE--EEEeCC
Q 004665 386 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 459 (738)
Q Consensus 386 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--VVlKps 459 (738)
-++.++++++.+-....+..... ...+|.....++.|+--|++..|- ||-..++...||-.||+. |+.-|.
T Consensus 80 ai~~A~~~I~~fH~~Q~p~~~~~---~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp 156 (425)
T COG0141 80 ALEVAAENIEAFHEAQLPKDWLV---ETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPP 156 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCccce---eccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCC
Confidence 45566667776643222211111 113567778889999999999992 676667778899999985 444454
Q ss_pred cc---cHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhhhcC----CCcCEEEeecCHHH--HHHHHHhCCCcEE
Q 004665 460 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKLD----DVIDLVIPRGSNKL--VSQIKESTKIPVL 529 (738)
Q Consensus 460 e~---tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l~~~----~~vd~V~fTGS~~~--g~~i~~~a~~p~~ 529 (738)
.. .|.+ +.-++++ |+=.|.. ||...-++|.-. |.||+|+=-|..=+ +|+.... ..-.=
T Consensus 157 ~~~gv~p~i-L~AA~~~----------Gv~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g-~V~ID 224 (425)
T COG0141 157 PKDGVNPEI-LAAARLA----------GVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG-VVGID 224 (425)
T ss_pred CCCCCCHHH-HHHHHHh----------CcHHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC-CcccC
Confidence 43 3433 1222221 2222333 544333334322 67999988887543 3333221 11111
Q ss_pred EecCCcCe-EEEcCCCCHHHHHHHHHHHccccCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcccccccC
Q 004665 530 GHADGICH-VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI 608 (738)
Q Consensus 530 lElGGk~p-~iV~~dADld~Aa~~iv~~~f~n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv 608 (738)
+..|=..- +|-|++||.+..+..++.=+=.... .+-++|..| ++|.++..+++.+.-..+ ++ ..+.
T Consensus 225 ~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~----a~aiLvT~s---~~la~~v~~~v~~~l~~l---~~-~ei~-- 291 (425)
T COG0141 225 MIAGPSEVLVIADETANPDFVAADLLSQAEHDPD----AQAILVTDS---EELAEAVEAAVERQLETL---PR-AEIA-- 291 (425)
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCCC----ceEEEEeCc---HHHHHHHHHHHHHHHHhc---cH-HHHH--
Confidence 22222222 4445669999988777643332211 112455443 355555555544321000 11 0000
Q ss_pred CCCCccccCcccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEecCHHHHHHHHHh-cceeEEEECCCCC
Q 004665 609 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTR 676 (738)
Q Consensus 609 ~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~~GLsa~VfT~d~~~a~~~~~~-l~~G~V~iN~~~~ 676 (738)
...+ +-|| .|+.++|+|||++++|..- +--.-|.++|... +..+ -++|.|++...+.
T Consensus 292 --~~~l--~~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~~---~l~~I~nAGsIFlG~~sP 349 (425)
T COG0141 292 --RKAL--ENYG---AIILVDDLDEAVEISNEYA-PEHLELQTENPRE---LLGKIRNAGSIFLGHYSP 349 (425)
T ss_pred --HHHH--HhCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHHH---HHHHhcccceeeecCCCC
Confidence 0001 1234 4667899999999999864 3345788988754 3433 4689999998653
No 231
>PRK13769 histidinol dehydrogenase; Provisional
Probab=92.94 E-value=17 Score=39.94 Aligned_cols=235 Identities=14% Similarity=0.058 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCCceEEEEeeeeeeEEEEeCC-ChHHHHHHHHHHHHhCCEEEE--eCCc-c
Q 004665 386 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLL--KGGK-E 461 (738)
Q Consensus 386 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGNtVVl--Kpse-~ 461 (738)
-++.+.++++.+.....+..... ..+|.....++.|+--|++..|. +|-..++.++||-.||+.=|+ -|.. -
T Consensus 58 ai~~a~~~I~~fh~~q~~~~~~~----~~~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~i 133 (368)
T PRK13769 58 AALEAAKSLEALYSRLKPPEAVD----FYGGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRGV 133 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEe----cCCCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCCC
Confidence 44556666666653222211111 12566677889999999999994 455567888899999986444 3432 2
Q ss_pred cHHHHHHHHHHHHhhCCCccCcCcEEEec-CCChhhHhhhcCCCcCEEEeecCHHH--HHHHHHh-CCCcEEEecCCcCe
Q 004665 462 AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKL--VSQIKES-TKIPVLGHADGICH 537 (738)
Q Consensus 462 tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l~~~~~vd~V~fTGS~~~--g~~i~~~-a~~p~~lElGGk~p 537 (738)
.|.+ +.-+++ .|+=.+.. |+...-+++..--+||+|+=-|..=+ +|+.... .++- +--|=..-
T Consensus 134 ~p~v-L~aa~~----------~Gv~eIy~vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID--~~AGPSEv 200 (368)
T PRK13769 134 TGEL-LAVAKE----------LGVKGVLAIGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGID--GIEGPTEL 200 (368)
T ss_pred CHHH-HHHHHH----------cCCCeeecccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCC--CcCCCcce
Confidence 3322 111222 24444554 55433234443337999998888543 4443211 1222 11222334
Q ss_pred EEEcCCCCHHHHHHHHHHHccc--cCceecccceeEEeccccchHHHHHHHHHHHhcCceeecCCcccccccCCCCCccc
Q 004665 538 VYVDKSANLDVAKNIVIDAKID--YPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFH 615 (738)
Q Consensus 538 ~iV~~dADld~Aa~~iv~~~f~--n~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~i~~ 615 (738)
+|+-++||.+..+..++.=+=. +++ -++|..+ .++.+++.+++++.-.
T Consensus 201 lViAD~a~p~~vAaDLLaQAEH~~~a~------~iLvT~s---~~la~~V~~~v~~~~~--------------------- 250 (368)
T PRK13769 201 VVYAEGVPPEVAVRGALAQLEHGPTSF------AYLLSTD---AELLKAAEEIYRRERT--------------------- 250 (368)
T ss_pred EEEcCCCCHHHHHHHHHHHhhcCCCCc------EEEEECC---HHHHHHHHHHHHHHHH---------------------
Confidence 6666679998877766543221 222 1334332 3555666665554200
Q ss_pred cCcccceEEEEEeCCHHHHHHHHHcCC-CCcEEEEEecCHHHHHHHHHhcceeEEEECCCC
Q 004665 616 HEYNSMVCTVEIVDDVRAAIDHIHQHG-SAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST 675 (738)
Q Consensus 616 eE~FGPVl~v~~~~~~dEAi~~aN~~~-~GLsa~VfT~d~~~a~~~~~~l~~G~V~iN~~~ 675 (738)
+ ..|- ..|+-++|+|||++++|.-- --|. |.+.+ . .+.+=-.+|.|+++.+.
T Consensus 251 ~-~~~~-~~iivv~~leeai~~~N~~APEHLe--l~~~~-~---~~~~i~nAGsiFl~~p~ 303 (368)
T PRK13769 251 S-SMGP-LEVRKVAGVEEAVRFIDEIAPEHLE--VWGRR-E---VAYRVRNVGAVSVNMPS 303 (368)
T ss_pred h-cCCC-CeEEEECCHHHHHHHHHhhChHheE--eeCcH-H---HHhhCCccCChhcCCch
Confidence 0 1221 34678999999999999864 2343 44422 2 22233568999996543
No 232
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=79.82 E-value=4.2 Score=52.10 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=61.9
Q ss_pred CceEEEEeeeeeeEEEEeCCChHHHHHHHHHHHHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCccCcCcEEEecCCChh
Q 004665 416 GLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 495 (738)
Q Consensus 416 ~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtVVlKpse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~~ 495 (738)
|......-.|.|+|+++.+.-. -....++.+|++||.+|+..++.. .+++. .||+.|.+.+.-. .
T Consensus 1178 GE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~~-------~~~~~-----~Lp~~v~~~v~~~--~ 1242 (1318)
T PRK11809 1178 GERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDALH-------RALVA-----ALPAAVQARIQLA--K 1242 (1318)
T ss_pred CCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCchh-------HHHHH-----hccHHHHhHhhhc--c
Confidence 4455667799999999987543 245677889999999998755432 22222 2899988876411 1
Q ss_pred hHhhhcCCCcCEEEeecCHHHHHHHHHh
Q 004665 496 PDLLKLDDVIDLVIPRGSNKLVSQIKES 523 (738)
Q Consensus 496 ~~~l~~~~~vd~V~fTGS~~~g~~i~~~ 523 (738)
...+ ....++.|.|-|.....+.+.++
T Consensus 1243 ~~~~-~~~~~~avl~~G~~~~l~~~~~~ 1269 (1318)
T PRK11809 1243 DWQL-ADQPFDAVLFHGDSDQLRALCEQ 1269 (1318)
T ss_pred cccc-ccCCccEEEEeCCHHHHHHHHHH
Confidence 1222 23469999999999876666544
No 233
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=61.28 E-value=25 Score=36.85 Aligned_cols=117 Identities=21% Similarity=0.216 Sum_probs=66.6
Q ss_pred cchhhHHHHHH-hhcCCCEEEeeccccccccCCcccCCccccceeeccchHHHH-h-cCCCCccccCch------HHHHH
Q 004665 197 WDNDSLAGLLA-LELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEI-T-FGDKSRVGRGGM------TAKVN 267 (738)
Q Consensus 197 i~~D~~A~~lA-~~L~A~~li~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i-~-~~~~~~~~~ggM------~~Kl~ 267 (738)
++++....+.- .+|+++ +-++.||.--... .+..-+.+|..+.. + ++...-.+||.+ ..|++
T Consensus 123 ~~~~a~e~~r~R~~l~a~-v~ilaDV~~kh~~--------~l~~~~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~ 193 (254)
T PF03437_consen 123 IEGCAGELLRYRKRLGAD-VKILADVHVKHSS--------PLATRDLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLK 193 (254)
T ss_pred ccccHHHHHHHHHHcCCC-eEEEeeechhhcc--------cCCCCCHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHH
Confidence 55555544444 458999 8888888754433 22233333333221 2 122222344433 34555
Q ss_pred HHHHHHHcCCcEEEEeCccchhHHHh---hcCceeEEEEccCCCCCC--CHHHHHHHHHHHH
Q 004665 268 AAYCAACAGIPVVITSGFAMDSIIKV---LEGKRVGTLFHRDAHLWV--KQVGAREMAVAAR 324 (738)
Q Consensus 268 aa~~a~~~gi~v~I~~g~~~~~i~~~---~tg~~iGTvi~~~~~~~~--~~~~v~~av~~A~ 324 (738)
.++.++. +||.|.+|-.++++.+. .+|-.+||++..++..|. .++-|++-+++++
T Consensus 194 ~vr~~~~--~PVlvGSGvt~~Ni~~~l~~ADG~IVGS~~K~~G~~~n~VD~~Rv~~fm~~v~ 253 (254)
T PF03437_consen 194 RVREAVP--VPVLVGSGVTPENIAEYLSYADGAIVGSYFKKDGKWENPVDPERVRRFMEAVK 253 (254)
T ss_pred HHHhcCC--CCEEEecCCCHHHHHHHHHhCCEEEEeeeeeeCCEeCCcCCHHHHHHHHHHhh
Confidence 5555444 89999999999999774 467788999986643222 2444555555443
No 234
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=52.78 E-value=21 Score=34.50 Aligned_cols=58 Identities=28% Similarity=0.296 Sum_probs=34.7
Q ss_pred eeccccccccCCcccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHh
Q 004665 217 LLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 293 (738)
Q Consensus 217 ~~TdV~GV~~~dP~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~ 293 (738)
+.+||||++++ ++++=.-.-+|+. .| .+.+|+--| ...+.|+.|-|+.|+....+..-
T Consensus 11 li~DVDGvLTD------G~ly~~~~Gee~K---aF-----nv~DG~Gik-----~l~~~Gi~vAIITGr~s~ive~R 68 (170)
T COG1778 11 LILDVDGVLTD------GKLYYDENGEEIK---AF-----NVRDGHGIK-----LLLKSGIKVAIITGRDSPIVEKR 68 (170)
T ss_pred EEEeccceeec------CeEEEcCCCceee---ee-----eccCcHHHH-----HHHHcCCeEEEEeCCCCHHHHHH
Confidence 34699999987 5432111112222 12 235666433 34567999888899888766653
No 235
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=40.13 E-value=39 Score=27.21 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 004665 313 QVGAREMAVAARESSRRLQALQSQDRRKILLDVA 346 (738)
Q Consensus 313 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 346 (738)
++|+..+++.-..|..-|..++...|..++..+.
T Consensus 7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~ 40 (63)
T PF13376_consen 7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWIN 40 (63)
T ss_pred CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHH
Confidence 5699999999999999999999999999997765
No 236
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=37.92 E-value=3e+02 Score=26.99 Aligned_cols=114 Identities=9% Similarity=0.101 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCChhhhh-HHHh--cccccccCCcccccCccccchHHHHHHhhh-HHHHHHHHHH
Q 004665 35 LGRLGALLEQLKELNSQGFEIILVSSGAVGVG-RQRL--RYRKLVNSSLADLQKPQNELDGKACAAVGQ-SSLMALYDTL 110 (738)
Q Consensus 35 ~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g-~~~l--~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~-~~~~~~~~~~ 110 (738)
.+.+.+.++.|......|.+|+ +.|.|++.. .+.+ .+.+++......++...++.+.....++++ .....++...
T Consensus 24 ~~~I~~aa~~i~~~l~~G~Kvl-~cGNGgSaadAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~vFsRq 102 (176)
T COG0279 24 IEAIERAAQLLVQSLLNGNKVL-ACGNGGSAADAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDEVFSRQ 102 (176)
T ss_pred HHHHHHHHHHHHHHHHcCCEEE-EECCCcchhhHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHHHHHHH
Confidence 3446667777777777788855 456665543 2221 112221101111222222223335555555 3445567777
Q ss_pred hhcCCCceeEEEecCCCCCcccccccHHHHHHHHHhCCceEEE
Q 004665 111 FSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIF 153 (738)
Q Consensus 111 l~~~gi~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~iPVi 153 (738)
+++.|.+..-++ . +...+...|+.+.++..-+.|...|.
T Consensus 103 veA~g~~GDvLi-g---ISTSGNS~nVl~Ai~~Ak~~gm~vI~ 141 (176)
T COG0279 103 VEALGQPGDVLI-G---ISTSGNSKNVLKAIEAAKEKGMTVIA 141 (176)
T ss_pred HHhcCCCCCEEE-E---EeCCCCCHHHHHHHHHHHHcCCEEEE
Confidence 778887653332 1 11122346778999999999988775
No 237
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=36.43 E-value=87 Score=32.38 Aligned_cols=50 Identities=28% Similarity=0.465 Sum_probs=35.2
Q ss_pred CCcEEEEeCccchhHHH---hhcCceeEEEEccCCCCCC--CHHHHHHHHHHHHH
Q 004665 276 GIPVVITSGFAMDSIIK---VLEGKRVGTLFHRDAHLWV--KQVGAREMAVAARE 325 (738)
Q Consensus 276 gi~v~I~~g~~~~~i~~---~~tg~~iGTvi~~~~~~~~--~~~~v~~av~~A~~ 325 (738)
.+||.+.||-+++++.. +.+|-.+||++..++..|. ..+-+.+.+++|++
T Consensus 205 ~~pvlvGSGv~~eN~~~~l~~adG~IvgT~lK~~G~~~n~VD~~Rv~~~v~~a~~ 259 (263)
T COG0434 205 DTPVLVGSGVNPENIEELLKIADGVIVGTSLKKGGVTWNPVDLERVRRFVEAARR 259 (263)
T ss_pred CCCEEEecCCCHHHHHHHHHHcCceEEEEEEccCCEecCccCHHHHHHHHHHHHH
Confidence 48999999999987755 5568889999998876554 23344444555443
No 238
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=35.80 E-value=61 Score=30.17 Aligned_cols=47 Identities=30% Similarity=0.572 Sum_probs=32.4
Q ss_pred CeEEEEECccceecCCCccc-HHHHHHHHHHHHHHHhCCCeEEEEcCCh
Q 004665 15 KRLVVKVGTAVVTRSDGRLA-LGRLGALLEQLKELNSQGFEIILVSSGA 62 (738)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~-~~~~~~~~~~i~~l~~~g~~vvlV~GGg 62 (738)
|.+++=+.|.++.+..+... ........+.++.|+++|++++++. |-
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaT-GR 49 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISS-SR 49 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEEC-CC
Confidence 68999999999875322110 1123567778888888999988887 44
No 239
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=34.82 E-value=92 Score=24.57 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHH
Q 004665 321 VAARESSRRLQALQSQDRRKILLDVADALEANESL 355 (738)
Q Consensus 321 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ee 355 (738)
+.++..-..|+.+|.++|..+..+.....++..++
T Consensus 30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e 64 (66)
T cd01390 30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKE 64 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 34455567899999999999988887776665544
No 240
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=33.99 E-value=43 Score=25.91 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=18.9
Q ss_pred HHhcCCHHHHHHHHHHHHHHHH
Q 004665 329 RLQALQSQDRRKILLDVADALE 350 (738)
Q Consensus 329 ~w~~~~~~~R~~~L~~~a~~l~ 350 (738)
.|..++..+|.+++.++...+.
T Consensus 29 ~W~~~s~~er~~i~~~l~~R~~ 50 (51)
T PF06945_consen 29 DWKSMSDDERRAILARLRARRA 50 (51)
T ss_pred HHhhCCHHHHHHHHHHHHHHhc
Confidence 5999999999999998877653
No 241
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B ....
Probab=32.96 E-value=48 Score=34.45 Aligned_cols=183 Identities=14% Similarity=0.112 Sum_probs=106.5
Q ss_pred HHhCCEEEEeCCcccHHHHHHHHHHHHhhCCCc-cCcCcEEEecCCChhhHhhhcCCCcCEEEeecCHHHHHHHHHhCCC
Q 004665 448 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKI 526 (738)
Q Consensus 448 LaaGNtVVlKpse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~vd~V~fTGS~~~g~~i~~~a~~ 526 (738)
|..++..++=|.-.-++|+.++.+ + ||. +-+++..+...+ --|+...++++==....+.|.+....
T Consensus 4 L~~~~~~l~~p~~~D~~SAr~~e~--------~Gf~a----i~~sg~~~a~s~-G~pD~~~lt~~e~~~~~~~I~~~~~i 70 (238)
T PF13714_consen 4 LHEPGKPLVLPNVWDALSARLAER--------AGFDA----IATSGAGVAASL-GYPDGGLLTLTEMLAAVRRIARAVSI 70 (238)
T ss_dssp HHHSSSSEEEEEESSHHHHHHHHH--------TT-SE----EEEHHHHHHHHT-TS-SSS-S-HHHHHHHHHHHHHHSSS
T ss_pred hhcCCCcEEeCCCcCHHHHHHHHH--------cCCCE----EEechHHHHHHc-CCCCCCCCCHHHHHHHHHHHHhhhcC
Confidence 566766666688888888766543 3 554 222332333444 45788888888777888888887777
Q ss_pred cEEE--ecC-CcCeEEEcCCCCHHHHHHHHHHHccc--c--CceecccceeEEeccccchHHHHHHHHHHHhcCceeecC
Q 004665 527 PVLG--HAD-GICHVYVDKSANLDVAKNIVIDAKID--Y--PAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGG 599 (738)
Q Consensus 527 p~~l--ElG-Gk~p~iV~~dADld~Aa~~iv~~~f~--n--~G~C~a~~rvlV~~~i~dd~f~~~l~~~~~~~~~~~~g~ 599 (738)
|++. |.| |++|. ++...++....+... | =|.|.....=++ ++ ++|++++++..+... +
T Consensus 71 Pv~vD~d~GyG~~~~------~v~~tv~~~~~aG~agi~IEDq~~~~~~~~l~--~~--ee~~~kI~Aa~~a~~-----~ 135 (238)
T PF13714_consen 71 PVIVDADTGYGNDPE------NVARTVRELERAGAAGINIEDQRCGHGGKQLV--SP--EEMVAKIRAAVDARR-----D 135 (238)
T ss_dssp EEEEE-TTTSSSSHH------HHHHHHHHHHHCT-SEEEEESBSTTTSTT-B----H--HHHHHHHHHHHHHHS-----S
T ss_pred cEEEEcccccCchhH------HHHHHHHHHHHcCCcEEEeeccccCCCCCcee--CH--HHHHHHHHHHHHhcc-----C
Confidence 7775 444 44332 345666666653221 1 134652222233 33 588888877766431 1
Q ss_pred CcccccccCCCCCccccCcccceEEEEEeCCHHHHHHHHHcC-CCCcEEEEEe---cCHHHHHHHHHhcceeEEEECC
Q 004665 600 PRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH-GSAHTDCIVA---EDQKVAETFLCQVDSAAVFHNA 673 (738)
Q Consensus 600 ~~~~~~~pv~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~-~~GLsa~VfT---~d~~~a~~~~~~l~~G~V~iN~ 673 (738)
+. -++ +.+.+.|.. ....+||||+.+|.. +-| +-.||- ++.+.+.++.++++ +-+++|.
T Consensus 136 ~~--~~I------~ARTDa~~~-----~~~~~deaI~R~~aY~eAG-AD~ifi~~~~~~~~i~~~~~~~~-~Pl~v~~ 198 (238)
T PF13714_consen 136 PD--FVI------IARTDAFLR-----AEEGLDEAIERAKAYAEAG-ADMIFIPGLQSEEEIERIVKAVD-GPLNVNP 198 (238)
T ss_dssp TT--SEE------EEEECHHCH-----HHHHHHHHHHHHHHHHHTT--SEEEETTSSSHHHHHHHHHHHS-SEEEEET
T ss_pred Ce--EEE------EEecccccc-----CCCCHHHHHHHHHHHHHcC-CCEEEeCCCCCHHHHHHHHHhcC-CCEEEEc
Confidence 11 111 345555543 456789999999975 344 556662 67778999999995 6677775
No 242
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=32.74 E-value=1.1e+02 Score=25.09 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHH
Q 004665 321 VAARESSRRLQALQSQDRRKILLDVADALEANESL 355 (738)
Q Consensus 321 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ee 355 (738)
+..+.+-..|++||.++|..+-.+....=++...+
T Consensus 34 e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~e 68 (73)
T PF09011_consen 34 EVMKEISERWKSLSEEEKEPYEERAKEDKERYERE 68 (73)
T ss_dssp HHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677899999999999987776554444333
No 243
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=32.51 E-value=1e+02 Score=24.63 Aligned_cols=36 Identities=8% Similarity=0.114 Sum_probs=27.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHHH
Q 004665 322 AARESSRRLQALQSQDRRKILLDVADALEANESLIK 357 (738)
Q Consensus 322 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel~ 357 (738)
..+.+-..|..+|.++|..+-.......+++..++.
T Consensus 31 i~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~~ 66 (69)
T PF00505_consen 31 ISKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEMP 66 (69)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556689999999999998888777777665543
No 244
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=31.56 E-value=89 Score=25.96 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=25.4
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChh
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 63 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~ 63 (738)
+.|+=.||.-.+|. ..+.+.|.++...--.++|||||.+
T Consensus 4 ~rVli~GgR~~~D~---------~~i~~~Ld~~~~~~~~~~lvhGga~ 42 (71)
T PF10686_consen 4 MRVLITGGRDWTDH---------ELIWAALDKVHARHPDMVLVHGGAP 42 (71)
T ss_pred CEEEEEECCccccH---------HHHHHHHHHHHHhCCCEEEEECCCC
Confidence 45666788777764 3455555555554456889999883
No 245
>smart00398 HMG high mobility group.
Probab=28.68 E-value=1.5e+02 Score=23.42 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=26.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHHH
Q 004665 323 ARESSRRLQALQSQDRRKILLDVADALEANESLI 356 (738)
Q Consensus 323 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~eel 356 (738)
++..-..|+.+|.++|..+........+++..++
T Consensus 33 ~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~ 66 (70)
T smart00398 33 SKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEM 66 (70)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445568999999999999888877776665554
No 246
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=28.14 E-value=1.3e+02 Score=29.39 Aligned_cols=58 Identities=16% Similarity=0.208 Sum_probs=31.8
Q ss_pred EeeccccccccCCc--ccCCccccceeeccchHHHHhcCCCCccccCchHHHHHHHHHHHHcCCcEEEEeCccchhHHHh
Q 004665 216 VLLSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 293 (738)
Q Consensus 216 i~~TdV~GV~~~dP--~~~~a~~i~~i~~~e~~~~i~~~~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~i~~~ 293 (738)
.+.+|+|||+++.- -++++.-....+ ..+||- ...+.+.|+++.|+++.....+...
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~----------------~~D~~~-----~~~L~~~Gi~laIiT~k~~~~~~~~ 67 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFD----------------IKDGMG-----VIVLQLCGIDVAIITSKKSGAVRHR 67 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEe----------------cchHHH-----HHHHHHCCCEEEEEECCCcHHHHHH
Confidence 34679999999741 133332222222 234442 2344567999777777665544443
Q ss_pred h
Q 004665 294 L 294 (738)
Q Consensus 294 ~ 294 (738)
+
T Consensus 68 l 68 (169)
T TIGR02726 68 A 68 (169)
T ss_pred H
Confidence 3
No 247
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=24.37 E-value=1.7e+02 Score=23.85 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHHH
Q 004665 322 AARESSRRLQALQSQDRRKILLDVADALEANESL 355 (738)
Q Consensus 322 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ee 355 (738)
.++..-..|+.+|.++|..+........+++.++
T Consensus 32 isk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~~ 65 (72)
T cd01388 32 ISKILGDRWKALSNEEKQPYYEEAKKLKELHMKL 65 (72)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566899999999998887766666655433
No 248
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=22.87 E-value=1.6e+02 Score=31.57 Aligned_cols=49 Identities=20% Similarity=0.341 Sum_probs=37.1
Q ss_pred cCCeEEEEECccceecCCC-cccHHHHHHHHHHHHHHHhCCCeEEEEcCChhh
Q 004665 13 DVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVG 64 (738)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~ 64 (738)
..+.+|.=+.|.++++... ++.- +.+.+.|..|.+.|++++|+.+|+..
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~ird---PgV~EaL~~LkekGikLaIaTS~~Re 174 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRD---PRIYDSLTELKKRGCILVLWSYGDRD 174 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCC---HHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 4568999999999998652 1211 45677888888999999999987643
No 249
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=22.16 E-value=3.2e+02 Score=26.40 Aligned_cols=43 Identities=16% Similarity=0.349 Sum_probs=28.2
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCC-eEEEEcCChhhhhHH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGF-EIILVSSGAVGVGRQ 68 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~-~vvlV~GGg~~~g~~ 68 (738)
.|++-..|..+++ ..|++.|..+...|. +++.+.||.-.++..
T Consensus 70 ~i~Ld~~Gk~~sS----------~~fA~~l~~~~~~g~~~i~F~IGG~~G~~~~ 113 (155)
T PF02590_consen 70 VILLDERGKQLSS----------EEFAKKLERWMNQGKSDIVFIIGGADGLSEE 113 (155)
T ss_dssp EEEE-TTSEE--H----------HHHHHHHHHHHHTTS-EEEEEE-BTTB--HH
T ss_pred EEEEcCCCccCCh----------HHHHHHHHHHHhcCCceEEEEEecCCCCCHH
Confidence 5666677888876 368888888888897 899999886544443
No 250
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=22.10 E-value=3.7e+02 Score=25.93 Aligned_cols=43 Identities=16% Similarity=0.300 Sum_probs=29.7
Q ss_pred eEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcCChhhhhHH
Q 004665 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQ 68 (738)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~GGg~~~g~~ 68 (738)
.|++-..|..+++ ..+++.|..+...|.+++.|.||.-.++..
T Consensus 68 ~i~LDe~Gk~~sS----------~~fA~~l~~~~~~g~~i~FvIGGa~G~~~~ 110 (153)
T TIGR00246 68 VVTLDIPGKPWTT----------PQLADTLEKWKTDGRDVTLLIGGPEGLSPT 110 (153)
T ss_pred EEEEcCCCCcCCH----------HHHHHHHHHHhccCCeEEEEEcCCCcCCHH
Confidence 4555667776665 357777778878887899999886444443
No 251
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=21.89 E-value=2.4e+02 Score=21.86 Aligned_cols=33 Identities=12% Similarity=0.147 Sum_probs=24.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcHH
Q 004665 322 AARESSRRLQALQSQDRRKILLDVADALEANES 354 (738)
Q Consensus 322 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~e 354 (738)
..+.....|+.++.++|..+..+......++..
T Consensus 31 i~~~~~~~W~~l~~~~k~~y~~~a~~~~~~y~~ 63 (66)
T cd00084 31 ISKILGEMWKSLSEEEKKKYEEKAEKDKERYEK 63 (66)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 345556689999999999988777766665543
No 252
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=20.13 E-value=1.6e+02 Score=30.56 Aligned_cols=42 Identities=10% Similarity=0.342 Sum_probs=32.3
Q ss_pred CCeEEEEECccceecCCCcccHHHHHHHHHHHHHHHhCCCeEEEEcC
Q 004665 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS 60 (738)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~~~~i~~l~~~g~~vvlV~G 60 (738)
.|.+++-+.|.++.+.. .+.. ...+.|++|+++|+++++..|
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~~----~~~~ai~~l~~~G~~~~iaTG 44 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-TISP----AVKQAIAAARAKGVNVVLTTG 44 (270)
T ss_pred eEEEEEecCCcCcCCCC-ccCH----HHHHHHHHHHHCCCEEEEecC
Confidence 46889999999997643 3433 345778889999999999984
Done!