Query 004672
Match_columns 738
No_of_seqs 368 out of 1924
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 18:06:31 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004672.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1971-1975//hhsearch_pdb/004672hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpq_A Serine/threonine-protei 1.0 1 1 449.6 29.3 261 21-283 25-289 (290)
2 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 435.9 21.1 268 11-287 22-301 (311)
3 4fie_A Serine/threonine-protei 1.0 1 1 434.9 24.8 255 19-284 149-408 (423)
4 4b9d_A Serine/threonine-protei 1.0 1 1 434.4 24.6 257 18-283 21-283 (350)
5 4fih_A Serine/threonine-protei 1.0 1 1 430.1 26.1 254 20-284 73-331 (346)
6 3v5w_A G-protein coupled recep 1.0 1 1 422.0 22.2 264 17-287 185-460 (689)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 421.0 23.4 259 15-283 7-269 (275)
8 3ubd_A Ribosomal protein S6 ki 1.0 1 1 418.0 17.4 260 17-286 20-291 (304)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 416.5 22.0 250 19-282 56-328 (336)
10 4b99_A Mitogen-activated prote 1.0 1 1 410.2 24.3 256 21-283 54-351 (398)
No 1
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=449.63 Aligned_cols=261 Identities=47% Similarity=0.868 Sum_probs=237.9
Q ss_pred CCC-EEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC--CCC
Q ss_conf 990-08999810297479999995799199999975156679988999999999999937999843045797845--898
Q 004672 21 EDM-EDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVDT--ANR 97 (738)
Q Consensus 21 ~~y-~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~~--~~~ 97 (738)
.+| ++.++||+|+||+||+|.+..++..||+|++.... ......+++.+|+.+|+.|+|||||+++++|... ...
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~ 102 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEE
T ss_pred CCEEEEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHH--CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
T ss_conf 836895069700738599999988999099999983254--798999999999999986799899919889964367886
Q ss_pred EEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCHHHHH
Q ss_conf 59999923799999999996699999999999999999999988199990304687551798089992999415326875
Q 004672 98 NINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL 177 (738)
Q Consensus 98 ~i~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGlA~~~ 177 (738)
.+++||||++||+|.+++.+.+.+++..++.|++||+.||.|||+++++|+||||||+|||++...|.+||+|||+|...
T Consensus 103 ~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCEEEEECCCCEEC
T ss_conf 89999948797899999986699999999999999999999999779988716457426658889998899727688767
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf 20245533699887893210124683100002102266555258999999998999999991999963446899589999
Q 004672 178 RKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQF 257 (738)
Q Consensus 178 ~~~~~~~~~GTp~YmAPEvl~~~ys~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~g~~p~~l~~~~spel~~l 257 (738)
......+.+|||.|||||++.+.|+.++|||||||++|+|+||+.||.+..+..+++..+..+..|..+....++++++|
T Consensus 183 ~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 183 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 98766776248020189780799992788887999999999788999999819999999973899877776578999999
Q ss_pred HHHHHH-CCCCCCCHHHHHCCCCCCCC
Q ss_conf 999972-72799899989529456877
Q 004672 258 IEKCLA-TVSSRLSARELLTDPFLQID 283 (738)
Q Consensus 258 I~kcL~-dP~~RpSa~ELL~Hpfl~~~ 283 (738)
|.+||. +|.+|||+.|+|+||||+.+
T Consensus 263 i~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 263 IEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHCCCCHHHCCCHHHHHCCCCCCCC
T ss_conf 999763896579199999569040589
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=435.86 Aligned_cols=268 Identities=24% Similarity=0.371 Sum_probs=233.6
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 95434676789900899981029747999999579919999997515667998899999999999993799984304579
Q 004672 11 PPSLLKLIPLEDMEDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTS 90 (738)
Q Consensus 11 ~~~~~~~I~~~~y~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~ 90 (738)
|+........++|.+++.||+|+||+||+|.++.+|..||+|++...... .....+++.+|+.+|+.|+|||||+++++
T Consensus 22 pp~~~~~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~ 100 (311)
T 4aw0_A 22 PPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFFVKLYFT 100 (311)
T ss_dssp -----CCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-CHHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 98998888852368988983164849999999999989999998888877-97899999999999986799898919999
Q ss_pred EEECCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEEC
Q ss_conf 78458985999992379999999999669999999999999999999998819999030468755179808999299941
Q 004672 91 WVDTANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGD 170 (738)
Q Consensus 91 fv~~~~~~i~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~D 170 (738)
|.+ ...+|+||||++||+|.+++.+.+.+++..++.|++||+.||.|||+++ |+||||||+|||++.+ |.+||+|
T Consensus 101 ~~~--~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~-g~vKl~D 175 (311)
T 4aw0_A 101 FQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNED-MHIQITD 175 (311)
T ss_dssp EEC--SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTT-SCEEECC
T ss_pred EEE--CCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEECCC-CCEEEEE
T ss_conf 973--8989999964899899999987499999999999999999999999887--8268787899698589-8889987
Q ss_pred CCHHHHHHCC----CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 5326875202----4553369988789321012-4683100002102266555258999999998999999991999963
Q 004672 171 LGLAAILRKS----HAARCVGTPEFMAPEVYEE-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA 245 (738)
Q Consensus 171 FGlA~~~~~~----~~~~~~GTp~YmAPEvl~~-~ys~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~g~~p~~ 245 (738)
||+|+.+... ...+.+|||.|||||++.+ .|+.++||||+||++|+|+||..||.+ .+..+++..+..+...
T Consensus 176 FGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~~~~~-- 252 (311)
T 4aw0_A 176 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEGLIFAKIIKLEYD-- 252 (311)
T ss_dssp CTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCCC--
T ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCC--
T ss_conf 6875025778776543675568030799897689999689899899999999749899899-7999999999719999--
Q ss_pred CCCCCCHHHHHHHHHHHH-CCCCCCCHHH------HHCCCCCCCCCCCH
Q ss_conf 446899589999999972-7279989998------95294568777741
Q 004672 246 LFKVEDPEVRQFIEKCLA-TVSSRLSARE------LLTDPFLQIDDYDS 287 (738)
Q Consensus 246 l~~~~spel~~lI~kcL~-dP~~RpSa~E------LL~Hpfl~~~~~~~ 287 (738)
++...++++++||.+||. +|.+|+|+.| +++||||+.-++..
T Consensus 253 ~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~ 301 (311)
T 4aw0_A 253 FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301 (311)
T ss_dssp CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHH
T ss_conf 9965699999999997628975780967975877987798758989899
No 3
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=434.90 Aligned_cols=255 Identities=29% Similarity=0.480 Sum_probs=222.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCE
Q ss_conf 78990089998102974799999957991999999751566799889999999999999379998430457978458985
Q 004672 19 PLEDMEDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVDTANRN 98 (738)
Q Consensus 19 ~~~~y~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~~~~~~ 98 (738)
+.+.|.++++||+|+||+||+|.++.+|..||+|++.+... ...+.+.+|+.+|+.|+|||||+++++|.+ ...
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--~~~ 222 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDE 222 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC----SSGGGHHHHHHHHHHCCCTTBCCEEEEEEE--TTE
T ss_pred HHHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCH----HHHHHHHHHHHHHHHCCCCCCCCEEEEEEE--CCE
T ss_conf 26843861696248184899999999998999999862554----689999999999985799898716899998--999
Q ss_pred EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCHHHHHH
Q ss_conf 99999237999999999966999999999999999999999881999903046875517980899929994153268752
Q 004672 99 INFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR 178 (738)
Q Consensus 99 i~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGlA~~~~ 178 (738)
+|||||||+||+|.+++.. +++++..++.|++||+.||.|||+++ ||||||||+|||++.+ |.+||+|||+|..+.
T Consensus 223 ~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~-g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 223 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVS 298 (423)
T ss_dssp EEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTT-CCEEECCCTTCEECC
T ss_pred EEEEEECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEECCC-CCEEEECCCCCEECC
T ss_conf 9999969899828988761-69899999999999999999999889--0446578777898589-998980372654777
Q ss_pred CC--CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCCHHH
Q ss_conf 02--4553369988789321012-468310000210226655525899999999899999999199996-3446899589
Q 004672 179 KS--HAARCVGTPEFMAPEVYEE-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEV 254 (738)
Q Consensus 179 ~~--~~~~~~GTp~YmAPEvl~~-~ys~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~g~~p~-~l~~~~spel 254 (738)
.. .....+||+.|||||++.+ .|+.++|||||||++|+|++|+.||.+ .+..+++..+..+..+. ..+...++++
T Consensus 299 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~ 377 (423)
T 4fie_A 299 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL 377 (423)
T ss_dssp SSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-SCHHHHHHHHHHSCCCCCSCTTSSCHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 887643466647472799997799999689999999999999978799898-6999999999727998876501299999
Q ss_pred HHHHHHHHH-CCCCCCCHHHHHCCCCCCCCC
Q ss_conf 999999972-727998999895294568777
Q 004672 255 RQFIEKCLA-TVSSRLSARELLTDPFLQIDD 284 (738)
Q Consensus 255 ~~lI~kcL~-dP~~RpSa~ELL~Hpfl~~~~ 284 (738)
++||.+||. +|.+|+|+.|+|+||||+...
T Consensus 378 ~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 378 KGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 9999998678956890999996098756899
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=434.39 Aligned_cols=257 Identities=24% Similarity=0.431 Sum_probs=228.2
Q ss_pred CCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
Q ss_conf 67899008999810297479999995799199999975156679988999999999999937999843045797845898
Q 004672 18 IPLEDMEDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVDTANR 97 (738)
Q Consensus 18 I~~~~y~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~~~~~ 97 (738)
-..++|.++++||+|+||+||+|.++.+|..||+|+++... ......+++.+|+.+|+.|+|||||+++++|.+ ..
T Consensus 21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~--~~ 96 (350)
T 4b9d_A 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR--MSSKEREESRREVAVLANMKHPNIVQYRESFEE--NG 96 (350)
T ss_dssp SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTT--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TT
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHH--CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE--CC
T ss_conf 85125588479702779399999988999899999986587--897999999999999987799898919999998--99
Q ss_pred EEEEEEECCCCCCHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCHHH
Q ss_conf 5999992379999999999669--99999999999999999999881999903046875517980899929994153268
Q 004672 98 NINFVTEMFTSGTLRQYRLKHR--RVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA 175 (738)
Q Consensus 98 ~i~LV~Ey~~gGSL~~~l~k~~--~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGlA~ 175 (738)
.+||||||++||+|.+++...+ .+++..++.|++||+.||.|||+++ |+||||||+|||++.+ |.+||+|||+|+
T Consensus 97 ~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~-g~vKl~DFGla~ 173 (350)
T 4b9d_A 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKD-GTVQLGDFGIAR 173 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTT-CCEEECSTTEES
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCCCHHHEEECCC-CCEEECCCCCCE
T ss_conf 9999994889983999999738999978999999999999999999899--1513597899798789-998976465214
Q ss_pred HHHCC--CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 75202--4553369988789321012-46831000021022665552589999999989999999919999634468995
Q 004672 176 ILRKS--HAARCVGTPEFMAPEVYEE-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDP 252 (738)
Q Consensus 176 ~~~~~--~~~~~~GTp~YmAPEvl~~-~ys~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~g~~p~~l~~~~sp 252 (738)
.+... .....+||+.|||||++.+ .|+.++|||||||++|+|+||+.||.+ .+..+++..+..+..|. ++...++
T Consensus 174 ~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~~~~-~~~~~s~ 251 (350)
T 4b9d_A 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKNLVLKIISGSFPP-VSLHYSY 251 (350)
T ss_dssp CCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHTCCCC-CCTTSCH
T ss_pred EECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCCC-CCCCCCH
T ss_conf 406885410145788360399998799989599999999999999978799899-69999999998089999-9755799
Q ss_pred HHHHHHHHHHH-CCCCCCCHHHHHCCCCCCCC
Q ss_conf 89999999972-72799899989529456877
Q 004672 253 EVRQFIEKCLA-TVSSRLSARELLTDPFLQID 283 (738)
Q Consensus 253 el~~lI~kcL~-dP~~RpSa~ELL~Hpfl~~~ 283 (738)
++++||.+||. +|.+|||+.|+|+||||+..
T Consensus 252 ~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 252 DLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 99999999855896679089999639976167
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=430.14 Aligned_cols=254 Identities=28% Similarity=0.468 Sum_probs=222.8
Q ss_pred CCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEE
Q ss_conf 89900899981029747999999579919999997515667998899999999999993799984304579784589859
Q 004672 20 LEDMEDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNI 99 (738)
Q Consensus 20 ~~~y~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~~~~~~i 99 (738)
.+.|.++++||+|+||+||+|.++.+|..||+|++++.... ..+.+.+|+.+|+.|+|||||+++++|.+ ...+
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--~~~~ 146 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLV--GDEL 146 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHCCCTTBCCEEEEEEE--TTEE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHH----HHHHHHHHHHHHHHCCCCCCCCEEEEEEE--CCEE
T ss_conf 57538707960272829999999899989999998527656----89999999999986799899919999998--9999
Q ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCHHHHHHC
Q ss_conf 99992379999999999669999999999999999999998819999030468755179808999299941532687520
Q 004672 100 NFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK 179 (738)
Q Consensus 100 ~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGlA~~~~~ 179 (738)
||||||++||+|.+++.+ +++++..++.|++||+.||.|||+++ |+||||||+|||++.+ |.+||+|||+|..+..
T Consensus 147 ~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~-g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSK 222 (346)
T ss_dssp EEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTT-CCEEECCCTTCEECCS
T ss_pred EEEEECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEECCC-CCEEEECCCCCEECCC
T ss_conf 999969899808999871-89899999999999999999999888--3556278899788799-9889902757536678
Q ss_pred C--CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCCHHHH
Q ss_conf 2--4553369988789321012-468310000210226655525899999999899999999199996-34468995899
Q 004672 180 S--HAARCVGTPEFMAPEVYEE-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVR 255 (738)
Q Consensus 180 ~--~~~~~~GTp~YmAPEvl~~-~ys~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~g~~p~-~l~~~~spel~ 255 (738)
. ...+.+||+.|||||++.+ .|+.++|||||||++|+|++|+.||.+ .+..+++..+..+..+. ..+...+++++
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~ 301 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLK 301 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-SCHHHHHHHHHHSSCCCCSCGGGSCHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 87753465627582799997799999689999999999999978799898-59999999997179998875022999999
Q ss_pred HHHHHHHH-CCCCCCCHHHHHCCCCCCCCC
Q ss_conf 99999972-727998999895294568777
Q 004672 256 QFIEKCLA-TVSSRLSARELLTDPFLQIDD 284 (738)
Q Consensus 256 ~lI~kcL~-dP~~RpSa~ELL~Hpfl~~~~ 284 (738)
+||.+||. +|.+|||+.|+|+||||+...
T Consensus 302 dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 302 GFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 999998679956890999996098656899
No 6
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=421.97 Aligned_cols=264 Identities=23% Similarity=0.334 Sum_probs=227.9
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
Q ss_conf 7678990089998102974799999957991999999751566--79988999999999999937999843045797845
Q 004672 17 LIPLEDMEDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDF--LQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVDT 94 (738)
Q Consensus 17 ~I~~~~y~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~--~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~~ 94 (738)
.+++++|.+++.||+|+||+||+|.++.+|..||+|+++.... ............++.+++.++|||||+++++|.+
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~- 263 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT- 263 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-
T ss_pred CCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE-
T ss_conf 9956892888898316483999999999998999999757882525568999999999999964899987179999998-
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCHH
Q ss_conf 89859999923799999999996699999999999999999999988199990304687551798089992999415326
Q 004672 95 ANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA 174 (738)
Q Consensus 95 ~~~~i~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGlA 174 (738)
...+||||||++||+|.+++.+.+.+++..++.|+.||+.||.|||+++ ||||||||+|||++.+ |.+||+|||+|
T Consensus 264 -~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~-G~vKL~DFGlA 339 (689)
T 3v5w_A 264 -PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEH-GHVRISDLGLA 339 (689)
T ss_dssp -SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTT-SCEEECCCTTC
T ss_pred -CCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEEECC-CCEEECCCCEE
T ss_conf -9988999946899829999986699999999999999999999999788--5416886687598089-98896456556
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCHHHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 875202455336998878932101-2-4683100002102266555258999999--99899999999199996344689
Q 004672 175 AILRKSHAARCVGTPEFMAPEVYE-E-EYNELVDIYSFGMCILEMVTFDYPYSEC--THPAQIYKKVISGKKPEALFKVE 250 (738)
Q Consensus 175 ~~~~~~~~~~~~GTp~YmAPEvl~-~-~ys~~sDIWSLGiiLyeLlTG~~Pf~~~--~~~~~i~k~i~~g~~p~~l~~~~ 250 (738)
..+......+.+|||.|||||++. + .|+.++|||||||++|+|++|.+||.+. .+...++..+...... ++...
T Consensus 340 ~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~--~p~~~ 417 (689)
T 3v5w_A 340 CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE--LPDSF 417 (689)
T ss_dssp EECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC--CCTTS
T ss_pred EECCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC--CCCCC
T ss_conf 6637898777657867318899847999995999999999999998687999999867799999850579888--87669
Q ss_pred CHHHHHHHHHHHH-CCCCCCC-----HHHHHCCCCCCCCCCCH
Q ss_conf 9589999999972-7279989-----99895294568777741
Q 004672 251 DPEVRQFIEKCLA-TVSSRLS-----ARELLTDPFLQIDDYDS 287 (738)
Q Consensus 251 spel~~lI~kcL~-dP~~RpS-----a~ELL~Hpfl~~~~~~~ 287 (738)
++++++||.+||. +|.+|++ +.|+++||||+.-++..
T Consensus 418 S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~ 460 (689)
T 3v5w_A 418 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQM 460 (689)
T ss_dssp CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHH
T ss_pred CHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHH
T ss_conf 9999999999760898687999888999996691504789889
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=421.04 Aligned_cols=259 Identities=24% Similarity=0.419 Sum_probs=228.1
Q ss_pred CCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
Q ss_conf 46767899008999810297479999995799199999975156679988999999999999937999843045797845
Q 004672 15 LKLIPLEDMEDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVDT 94 (738)
Q Consensus 15 ~~~I~~~~y~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~~ 94 (738)
..+-.+++|++++.||+|+||+||+|.+..+|..||+|.++.... ......+++.+|+.+|+.++|||||+++++|.+
T Consensus 7 ~~G~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~- 84 (275)
T 3hyh_A 7 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS- 84 (275)
T ss_dssp -------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred CCCCEEECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE-
T ss_conf 999893386899998217681999999999998999999837886-787899999999999987799899929999998-
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCHH
Q ss_conf 89859999923799999999996699999999999999999999988199990304687551798089992999415326
Q 004672 95 ANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA 174 (738)
Q Consensus 95 ~~~~i~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGlA 174 (738)
...+|+||||+ +|+|.+++.+.+++++..++.|++||+.||.|||+++ |+||||||+|||++.+ |.+||+|||+|
T Consensus 85 -~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~-~~vkl~DFGla 159 (275)
T 3hyh_A 85 -KDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEH-LNVKIADFGLS 159 (275)
T ss_dssp -SSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTT-CCEEECCSSCC
T ss_pred -CCEEEEEEECC-CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEECCC-CCEEEEECCCC
T ss_conf -99899999278-9978999987499999999999999999999999889--3066687587688799-98999454777
Q ss_pred HHHHCCC-CCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 8752024-5533699887893210124-6-83100002102266555258999999998999999991999963446899
Q 004672 175 AILRKSH-AARCVGTPEFMAPEVYEEE-Y-NELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVED 251 (738)
Q Consensus 175 ~~~~~~~-~~~~~GTp~YmAPEvl~~~-y-s~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~g~~p~~l~~~~s 251 (738)
....... ..+.+||+.|||||++.+. | +.++||||+||++|+|+||+.||.+ .+...+++.+..+..+ ++...+
T Consensus 160 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-~~~~~~~~~i~~~~~~--~p~~~s 236 (275)
T 3hyh_A 160 NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGVYT--LPKFLS 236 (275)
T ss_dssp ---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCCC--CCTTSC
T ss_pred EECCCCCCCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCC--CCCCCC
T ss_conf 2667887467702893527745506898889836568789999999988799899-8999999999749999--987799
Q ss_pred HHHHHHHHHHHH-CCCCCCCHHHHHCCCCCCCC
Q ss_conf 589999999972-72799899989529456877
Q 004672 252 PEVRQFIEKCLA-TVSSRLSARELLTDPFLQID 283 (738)
Q Consensus 252 pel~~lI~kcL~-dP~~RpSa~ELL~Hpfl~~~ 283 (738)
+++++||.+||. +|.+|||+.|+|+||||+.+
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCC
T ss_conf 999999999865896689199999719200658
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=417.99 Aligned_cols=260 Identities=21% Similarity=0.284 Sum_probs=225.2
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEC---CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
Q ss_conf 767899008999810297479999995---79919999997515667998899999999999993799984304579784
Q 004672 17 LIPLEDMEDTMKFLVKELQRHYRAFDE---YEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVD 93 (738)
Q Consensus 17 ~I~~~~y~il~kLG~GafgtVYkA~d~---~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~ 93 (738)
.+..++|++++.||+|+||+||+|.+. .++..||+|.++...... ....++.+|+.+|+.|+|||||+++++|.+
T Consensus 20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 97 (304)
T 3ubd_A 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEVNHPFIVKLHYAFQT 97 (304)
T ss_dssp CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCCCCTTEECEEEEEEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCH--HHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
T ss_conf 389556589889721888399999985588789799999981577684--789999999999987799799909999998
Q ss_pred CCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCH
Q ss_conf 58985999992379999999999669999999999999999999998819999030468755179808999299941532
Q 004672 94 TANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGL 173 (738)
Q Consensus 94 ~~~~~i~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGl 173 (738)
...+|+||||++||+|.+++.+.+.+++..++.|++||+.||.|||+++ |+||||||+|||++.+ |.+||+|||+
T Consensus 98 --~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~-g~vKl~DFGl 172 (304)
T 3ubd_A 98 --EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEE-GHIKLTDFGL 172 (304)
T ss_dssp --TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTT-SCEEEESSEE
T ss_pred --CCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEECCC-CCEEECCCCC
T ss_conf --9999999975799888999975599999999999999999999999779--9588887899578689-9887623663
Q ss_pred HHHHHC--CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 687520--24553369988789321012-468310000210226655525899999999899999999199996344689
Q 004672 174 AAILRK--SHAARCVGTPEFMAPEVYEE-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVE 250 (738)
Q Consensus 174 A~~~~~--~~~~~~~GTp~YmAPEvl~~-~ys~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~g~~p~~l~~~~ 250 (738)
|+.... ....+.+||+.|||||++.+ .|+.++||||+||++|+|+||+.||.+ .+..+++..+..+..+ ++...
T Consensus 173 a~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~~~--~p~~~ 249 (304)
T 3ubd_A 173 SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG-KDRKETMTMILKAKLG--MPQFL 249 (304)
T ss_dssp EEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCC--CCTTS
T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCC--CCCCC
T ss_conf 43326887630454418150799996568878777636119999999859899898-4999999999718999--98768
Q ss_pred CHHHHHHHHHHHH-CCCCCCC-----HHHHHCCCCCCCCCCC
Q ss_conf 9589999999972-7279989-----9989529456877774
Q 004672 251 DPEVRQFIEKCLA-TVSSRLS-----ARELLTDPFLQIDDYD 286 (738)
Q Consensus 251 spel~~lI~kcL~-dP~~RpS-----a~ELL~Hpfl~~~~~~ 286 (738)
++++++||.+||. +|.+||| +.|+++||||+..++.
T Consensus 250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~ 291 (304)
T 3ubd_A 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWN 291 (304)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred CHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHH
T ss_conf 999999999986469878799986789999769040378999
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=416.52 Aligned_cols=250 Identities=24% Similarity=0.292 Sum_probs=214.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCE
Q ss_conf 78990089998102974799999957991999999751566799889999999999999379998430457978458985
Q 004672 19 PLEDMEDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVDTANRN 98 (738)
Q Consensus 19 ~~~~y~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~~~~~~ 98 (738)
..+.|.+.++||+|+||+||+|.++.+|..||+|+++.... ..+|+.+|+.|+|||||++|++|.+ ...
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~--~~~ 124 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVRE--GPW 124 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEE--TTE
T ss_pred CHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH---------HHHHHHHHHHCCCCCCCCEEEEEEE--CCE
T ss_conf 53351768685138780999999889998999999788886---------9999999985799899939999998--999
Q ss_pred EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCHHHHHH
Q ss_conf 99999237999999999966999999999999999999999881999903046875517980899929994153268752
Q 004672 99 INFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR 178 (738)
Q Consensus 99 i~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGlA~~~~ 178 (738)
+||||||++||+|.+++.+.+.+++..++.|+.||+.||.|||+++ |+||||||+|||++.+...+||+|||+|..+.
T Consensus 125 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCHHHEEEECCCCEEEEEECCCCEECC
T ss_conf 9999966599869999987699999999999999999999999889--04261677887995899979996278776856
Q ss_pred CCC-------CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC-CCCCCC
Q ss_conf 024-------553369988789321012-46831000021022665552589999999989999999919999-634468
Q 004672 179 KSH-------AARCVGTPEFMAPEVYEE-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKP-EALFKV 249 (738)
Q Consensus 179 ~~~-------~~~~~GTp~YmAPEvl~~-~ys~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~g~~p-~~l~~~ 249 (738)
... ....+||+.|||||++.+ .|+.++|||||||++|+|+||+.||.+.. ...++..+..+..+ ..++..
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~ 281 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF-RGPLCLKIASEPPPIREIPPS 281 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC-CSCCHHHHHHSCCGGGGSCTT
T ss_pred CCCCCCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHCCCCCCHHCCCC
T ss_conf 7876540221785455802008999889998908999999999999997869989989-999999998089980025866
Q ss_pred CCHHHHHHHHHHHH-CCCCCCCHHHHH-------------CCCCCCC
Q ss_conf 99589999999972-727998999895-------------2945687
Q 004672 250 EDPEVRQFIEKCLA-TVSSRLSARELL-------------TDPFLQI 282 (738)
Q Consensus 250 ~spel~~lI~kcL~-dP~~RpSa~ELL-------------~Hpfl~~ 282 (738)
.++++++||.+||. +|.+|||+.|++ +|||+..
T Consensus 282 ~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~ 328 (336)
T 4g3f_A 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE 328 (336)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred CCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 79999999999762897689599999999999975443216987677
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=410.16 Aligned_cols=256 Identities=27% Similarity=0.357 Sum_probs=216.2
Q ss_pred CCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC----CC
Q ss_conf 99008999810297479999995799199999975156679988999999999999937999843045797845----89
Q 004672 21 EDMEDTMKFLVKELQRHYRAFDEYEGIEVAWNQVKLYDFLQSPEELERLYCEIHLLKTLKHRNIMKFYTSWVDT----AN 96 (738)
Q Consensus 21 ~~y~il~kLG~GafgtVYkA~d~~tG~~VAIK~ikl~~~~~s~e~~e~l~~Ei~iLk~L~HpNIVkl~~~fv~~----~~ 96 (738)
++|.+++.||+|+||+||+|.+..+|..||+|+++... ......+++.+|+.+|+.|+|||||++++++... ..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC--CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC
T ss_conf 97489889842608499999998999899999987400--3468899999999999866799954176555203554668
Q ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEECCCHHHH
Q ss_conf 85999992379999999999669999999999999999999998819999030468755179808999299941532687
Q 004672 97 RNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILSGLLYLHSRDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI 176 (738)
Q Consensus 97 ~~i~LV~Ey~~gGSL~~~l~k~~~lse~~i~~i~~QIl~aL~yLHs~gp~IIHrDIKp~NILI~~~~g~VKL~DFGlA~~ 176 (738)
..+|+||||+. |+|.+++.+.+.+++..++.|++||+.||.|||+++ |+||||||+|||++.+ |.+||+|||+|..
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~-~~~Ki~DFGla~~ 207 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNEN-CELKIGDFGMARG 207 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTT-CCEEECCCTTCBC
T ss_pred CEEEEEEECCC-CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCC-CCEEEEECCEEEE
T ss_conf 87999983799-988999986599999999999999999999999886--7678737133542788-8778722143421
Q ss_pred HHC------CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHC--CCCCC--
Q ss_conf 520------24553369988789321012--4683100002102266555258999999998999999991--99996--
Q 004672 177 LRK------SHAARCVGTPEFMAPEVYEE--EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKKPE-- 244 (738)
Q Consensus 177 ~~~------~~~~~~~GTp~YmAPEvl~~--~ys~~sDIWSLGiiLyeLlTG~~Pf~~~~~~~~i~k~i~~--g~~p~-- 244 (738)
+.. ....+.+||+.|||||++.+ .|+.++||||+||++|+|++|++||.+.+...++ ..+.. |..+.
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l-~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL-QLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHH-HHHHHHHCCCCGGG
T ss_pred CCCCCCCCCCCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHH-HHHHHHCCCCCHHH
T ss_conf 34675456666566255867648787627888997222111689999999788998988989999-99997038998677
Q ss_pred -------------------------CCCCCCCHHHHHHHHHHHH-CCCCCCCHHHHHCCCCCCCC
Q ss_conf -------------------------3446899589999999972-72799899989529456877
Q 004672 245 -------------------------ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID 283 (738)
Q Consensus 245 -------------------------~l~~~~spel~~lI~kcL~-dP~~RpSa~ELL~Hpfl~~~ 283 (738)
......++++++||.+||. +|.+|+||.|+|+||||+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf 63310023455553078768878898587999999999999774995579189999659723868
Done!