Query 004673
Match_columns 738
No_of_seqs 318 out of 1613
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 03:15:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004673.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004673hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 6.1E-42 1.3E-46 385.0 45.1 445 4-730 9-472 (485)
2 KOG0254 Predicted transporter 100.0 1E-39 2.2E-44 371.4 41.5 446 4-732 43-503 (513)
3 TIGR00887 2A0109 phosphate:H+ 100.0 8E-39 1.7E-43 362.1 45.5 442 2-726 12-502 (502)
4 PRK10077 xylE D-xylose transpo 100.0 3.7E-38 8E-43 350.8 45.2 437 4-733 10-478 (479)
5 TIGR01299 synapt_SV2 synaptic 100.0 1.7E-37 3.7E-42 366.5 46.6 208 2-210 163-381 (742)
6 PF00083 Sugar_tr: Sugar (and 100.0 1.6E-42 3.5E-47 383.4 -19.4 432 10-727 4-451 (451)
7 TIGR00879 SP MFS transporter, 100.0 7E-35 1.5E-39 317.6 39.9 440 3-722 25-480 (481)
8 PRK10642 proline/glycine betai 100.0 6.4E-33 1.4E-37 313.3 44.1 185 5-190 15-219 (490)
9 TIGR00898 2A0119 cation transp 100.0 2.6E-33 5.7E-38 315.1 30.7 176 27-208 110-288 (505)
10 PRK11551 putative 3-hydroxyphe 100.0 2.5E-31 5.3E-36 289.9 40.8 185 2-188 11-195 (406)
11 PRK09556 uhpT sugar phosphate 100.0 5.6E-32 1.2E-36 303.4 36.5 185 4-188 27-217 (467)
12 TIGR02332 HpaX 4-hydroxyphenyl 100.0 7.9E-32 1.7E-36 298.1 37.1 185 4-188 6-194 (412)
13 PRK11663 regulatory protein Uh 100.0 5.3E-31 1.2E-35 292.8 40.1 183 4-188 21-203 (434)
14 PRK10406 alpha-ketoglutarate t 100.0 3.5E-30 7.7E-35 285.8 43.1 184 3-187 19-222 (432)
15 TIGR00891 2A0112 putative sial 100.0 3.1E-30 6.6E-35 277.6 41.1 186 2-188 8-193 (405)
16 PRK12307 putative sialic acid 100.0 3.6E-30 7.7E-35 282.6 41.1 167 3-171 15-181 (426)
17 KOG0253 Synaptic vesicle trans 100.0 2.5E-31 5.5E-36 284.3 30.4 441 3-720 75-527 (528)
18 PRK09952 shikimate transporter 100.0 1.6E-29 3.5E-34 281.8 43.4 185 3-189 19-225 (438)
19 PRK03545 putative arabinose tr 100.0 2.4E-29 5.2E-34 274.3 41.4 182 3-186 6-187 (390)
20 TIGR00890 2A0111 Oxalate/Forma 100.0 8.6E-30 1.9E-34 269.9 35.0 176 7-186 5-180 (377)
21 TIGR00893 2A0114 d-galactonate 100.0 1.1E-29 2.5E-34 268.8 35.7 171 15-187 3-173 (399)
22 PRK14995 methyl viologen resis 100.0 1.2E-28 2.5E-33 279.2 45.3 185 1-187 1-186 (495)
23 COG2814 AraJ Arabinose efflux 100.0 5.8E-29 1.2E-33 273.4 40.8 180 3-184 10-189 (394)
24 COG2271 UhpC Sugar phosphate p 100.0 4.3E-30 9.3E-35 280.7 31.2 408 3-715 26-437 (448)
25 KOG0252 Inorganic phosphate tr 100.0 3.4E-31 7.4E-36 290.6 22.2 444 2-728 37-513 (538)
26 PRK11273 glpT sn-glycerol-3-ph 100.0 1E-28 2.2E-33 276.0 41.5 183 3-188 26-213 (452)
27 TIGR00903 2A0129 major facilit 100.0 5.9E-29 1.3E-33 272.6 38.1 169 18-189 3-171 (368)
28 PRK15075 citrate-proton sympor 100.0 1.2E-28 2.6E-33 273.8 40.8 167 4-170 13-199 (434)
29 PRK03893 putative sialic acid 100.0 2.4E-28 5.3E-33 273.6 42.4 183 3-188 17-199 (496)
30 TIGR00895 2A0115 benzoate tran 100.0 1.3E-28 2.8E-33 263.4 36.5 186 3-190 14-199 (398)
31 PRK09705 cynX putative cyanate 100.0 1.1E-28 2.5E-33 270.8 36.8 167 5-175 9-176 (393)
32 PRK10091 MFS transport protein 100.0 2.1E-27 4.5E-32 259.0 39.6 177 8-186 5-181 (382)
33 TIGR00881 2A0104 phosphoglycer 100.0 1.5E-28 3.1E-33 260.7 28.3 173 13-187 2-175 (379)
34 TIGR00712 glpT glycerol-3-phos 100.0 1.1E-27 2.3E-32 266.4 35.4 183 4-188 25-211 (438)
35 TIGR00711 efflux_EmrB drug res 100.0 1.1E-27 2.5E-32 266.3 34.9 178 7-186 3-180 (485)
36 PRK05122 major facilitator sup 100.0 1.2E-26 2.6E-31 252.8 40.1 167 6-174 15-190 (399)
37 PRK03699 putative transporter; 100.0 4E-27 8.6E-32 257.8 35.9 175 3-178 4-178 (394)
38 TIGR00894 2A0114euk Na(+)-depe 100.0 1E-27 2.2E-32 267.7 30.9 185 2-188 15-224 (465)
39 PRK15402 multidrug efflux syst 100.0 4E-26 8.6E-31 250.0 41.8 183 2-186 9-191 (406)
40 PLN00028 nitrate transmembrane 100.0 3.2E-26 6.9E-31 258.5 41.7 181 5-186 35-222 (476)
41 PRK10489 enterobactin exporter 100.0 1E-26 2.2E-31 255.9 36.6 387 12-727 23-414 (417)
42 PRK10213 nepI ribonucleoside t 100.0 6.4E-26 1.4E-30 249.6 42.8 183 2-186 16-198 (394)
43 TIGR00710 efflux_Bcr_CflA drug 100.0 5.9E-26 1.3E-30 243.6 41.4 175 10-186 9-183 (385)
44 PRK10504 putative transporter; 100.0 9.2E-26 2E-30 251.8 44.0 178 7-186 11-188 (471)
45 PRK12382 putative transporter; 100.0 3.6E-26 7.8E-31 248.9 39.5 165 7-173 16-189 (392)
46 TIGR00899 2A0120 sugar efflux 100.0 4.9E-26 1.1E-30 243.8 38.7 174 12-187 3-180 (375)
47 KOG0255 Synaptic vesicle trans 100.0 1.3E-26 2.9E-31 263.2 35.0 170 34-209 111-280 (521)
48 TIGR00900 2A0121 H+ Antiporter 100.0 9.4E-26 2E-30 238.5 38.9 166 11-178 4-174 (365)
49 PRK03633 putative MFS family t 100.0 3.3E-25 7.3E-30 241.3 42.1 152 1-152 1-152 (381)
50 cd06174 MFS The Major Facilita 100.0 9.7E-26 2.1E-30 235.8 36.3 167 10-178 3-169 (352)
51 TIGR00892 2A0113 monocarboxyla 100.0 3.6E-26 7.8E-31 256.6 34.0 179 3-184 16-195 (455)
52 TIGR00883 2A0106 metabolite-pr 100.0 4.7E-26 1E-30 242.8 33.3 172 15-187 2-194 (394)
53 PRK09874 drug efflux system pr 100.0 4.2E-25 9.1E-30 240.0 40.4 176 8-186 16-196 (408)
54 PF07690 MFS_1: Major Facilita 100.0 4.4E-26 9.4E-31 240.3 31.0 174 11-186 1-175 (352)
55 PRK10473 multidrug efflux syst 100.0 1E-24 2.2E-29 237.5 42.1 174 11-186 8-181 (392)
56 TIGR00897 2A0118 polyol permea 100.0 8.6E-25 1.9E-29 240.3 40.6 176 8-185 15-195 (402)
57 PRK15034 nitrate/nitrite trans 100.0 1E-24 2.3E-29 245.8 41.7 180 6-186 34-235 (462)
58 PRK11102 bicyclomycin/multidru 99.9 4.7E-24 1E-28 229.7 39.3 164 21-186 6-169 (377)
59 PRK15011 sugar efflux transpor 99.9 6.5E-24 1.4E-28 232.7 39.7 176 9-187 18-198 (393)
60 PRK11043 putative transporter; 99.9 1.7E-23 3.8E-28 228.5 42.4 169 15-186 15-183 (401)
61 PRK10133 L-fucose transporter; 99.9 1.1E-23 2.5E-28 235.7 41.9 149 4-152 24-175 (438)
62 PRK15403 multidrug efflux syst 99.9 4E-23 8.7E-28 229.0 43.1 178 8-187 18-195 (413)
63 PRK11646 multidrug resistance 99.9 3.7E-23 8E-28 228.2 41.9 172 11-185 15-187 (400)
64 KOG1330 Sugar transporter/spin 99.9 1.1E-25 2.3E-30 248.4 19.2 186 1-187 28-213 (493)
65 PRK11652 emrD multidrug resist 99.9 5.7E-23 1.2E-27 223.9 40.3 183 3-187 5-187 (394)
66 PRK10054 putative transporter; 99.9 2.8E-23 6.1E-28 228.7 38.0 174 10-186 11-185 (395)
67 PRK11010 ampG muropeptide tran 99.9 9E-23 1.9E-27 231.8 42.6 173 10-187 16-198 (491)
68 TIGR00886 2A0108 nitrite extru 99.9 9.9E-24 2.1E-28 225.6 32.7 177 10-187 5-192 (366)
69 TIGR00885 fucP L-fucose:H+ sym 99.9 4.9E-23 1.1E-27 228.8 39.3 171 8-178 5-202 (410)
70 PRK11195 lysophospholipid tran 99.9 1.8E-22 3.8E-27 222.3 41.0 171 10-187 7-177 (393)
71 COG2223 NarK Nitrate/nitrite t 99.9 2.1E-23 4.5E-28 228.5 32.1 384 4-713 12-402 (417)
72 KOG2532 Permease of the major 99.9 1.5E-23 3.2E-28 237.1 31.3 153 34-188 66-221 (466)
73 TIGR00896 CynX cyanate transpo 99.9 1.4E-22 3E-27 217.9 32.5 150 23-174 17-166 (355)
74 PRK08633 2-acyl-glycerophospho 99.9 3.9E-22 8.4E-27 245.5 39.5 164 24-187 28-203 (1146)
75 TIGR00902 2A0127 phenyl propri 99.9 1.7E-21 3.7E-26 212.9 39.7 156 11-172 9-168 (382)
76 KOG2504 Monocarboxylate transp 99.9 3.1E-23 6.7E-28 236.9 26.3 181 4-187 44-225 (509)
77 PRK11902 ampG muropeptide tran 99.9 4.4E-21 9.5E-26 210.8 41.8 172 11-187 4-185 (402)
78 KOG2533 Permease of the major 99.9 1.8E-22 3.8E-27 229.5 28.5 184 5-188 44-232 (495)
79 TIGR00889 2A0110 nucleoside tr 99.9 4.8E-21 1E-25 213.1 37.8 167 11-187 7-183 (418)
80 TIGR00792 gph sugar (Glycoside 99.9 2.3E-21 5E-26 213.3 33.9 171 16-186 9-197 (437)
81 PRK09528 lacY galactoside perm 99.9 5.2E-21 1.1E-25 211.1 35.9 172 11-185 15-193 (420)
82 TIGR00901 2A0125 AmpG-related 99.9 4.9E-21 1.1E-25 205.7 33.8 161 22-186 4-181 (356)
83 PRK06814 acylglycerophosphoeth 99.9 6.7E-21 1.5E-25 235.5 37.0 176 8-186 17-197 (1140)
84 PTZ00207 hypothetical protein; 99.9 4.4E-20 9.5E-25 213.7 41.1 197 3-205 25-229 (591)
85 PRK11128 putative 3-phenylprop 99.9 4.9E-20 1.1E-24 201.1 38.9 157 13-175 11-171 (382)
86 TIGR00882 2A0105 oligosacchari 99.9 3.4E-20 7.3E-25 202.9 37.4 172 10-186 6-186 (396)
87 PF06609 TRI12: Fungal trichot 99.9 2.3E-19 5E-24 207.3 39.7 171 10-184 48-218 (599)
88 TIGR00805 oat sodium-independe 99.9 1E-20 2.3E-25 221.6 27.2 180 6-186 33-283 (633)
89 PRK10207 dipeptide/tripeptide 99.9 3.3E-19 7.1E-24 203.1 37.5 174 8-184 16-194 (489)
90 TIGR02718 sider_RhtX_FptX side 99.9 2.8E-18 6E-23 187.4 41.0 175 8-184 3-185 (390)
91 TIGR00924 yjdL_sub1_fam amino 99.9 1.1E-18 2.4E-23 197.8 39.0 166 8-175 12-184 (475)
92 PF05977 MFS_3: Transmembrane 99.9 4.5E-18 9.8E-23 195.3 39.9 162 11-174 15-181 (524)
93 COG0738 FucP Fucose permease [ 99.8 4.2E-18 9.2E-23 186.2 37.0 171 6-176 13-203 (422)
94 TIGR00806 rfc RFC reduced fola 99.8 9.6E-19 2.1E-23 196.4 30.1 175 8-188 30-207 (511)
95 KOG3764 Vesicular amine transp 99.8 3.2E-19 6.9E-24 194.1 19.9 151 34-186 99-250 (464)
96 TIGR01301 GPH_sucrose GPH fami 99.8 6.8E-17 1.5E-21 183.5 39.8 173 15-187 13-222 (477)
97 PRK09584 tppB putative tripept 99.8 5E-17 1.1E-21 185.5 37.8 163 10-174 25-192 (500)
98 PRK09669 putative symporter Ya 99.8 2.4E-17 5.3E-22 183.9 32.2 174 13-186 16-207 (444)
99 COG2807 CynX Cyanate permease 99.8 1.7E-16 3.7E-21 171.6 33.9 171 5-178 11-181 (395)
100 KOG2615 Permease of the major 99.8 1.1E-17 2.3E-22 181.4 23.4 150 36-186 63-216 (451)
101 PRK10429 melibiose:sodium symp 99.8 5.4E-16 1.2E-20 175.1 35.2 175 12-186 12-204 (473)
102 PF03825 Nuc_H_symport: Nucleo 99.8 3E-15 6.5E-20 166.8 40.0 174 11-187 7-183 (400)
103 TIGR00788 fbt folate/biopterin 99.8 3.7E-16 7.9E-21 177.0 32.0 173 8-186 28-211 (468)
104 PF13347 MFS_2: MFS/sugar tran 99.7 8.7E-16 1.9E-20 170.6 27.4 159 27-185 23-200 (428)
105 PF11700 ATG22: Vacuole efflux 99.7 4.4E-14 9.4E-19 160.9 40.9 177 530-719 294-474 (477)
106 PRK09848 glucuronide transport 99.7 8.6E-15 1.9E-19 163.5 34.6 130 13-142 15-158 (448)
107 PRK11462 putative transporter; 99.7 1.9E-14 4.1E-19 162.7 36.0 174 13-186 16-207 (460)
108 PRK15462 dipeptide/tripeptide 99.7 1.2E-13 2.7E-18 157.6 40.0 156 17-174 20-180 (493)
109 PF01306 LacY_symp: LacY proto 99.6 2.8E-13 6.1E-18 151.0 33.2 142 566-717 263-405 (412)
110 COG2211 MelB Na+/melibiose sym 99.6 6.5E-13 1.4E-17 149.7 32.9 176 12-187 18-211 (467)
111 KOG2563 Permease of the major 99.6 1.8E-13 4E-18 151.7 25.0 185 2-187 41-239 (480)
112 PRK10642 proline/glycine betai 99.6 2.6E-13 5.6E-18 154.0 24.9 185 22-208 266-459 (490)
113 COG2270 Permeases of the major 99.5 7.1E-12 1.5E-16 138.5 30.7 147 41-187 58-224 (438)
114 TIGR01272 gluP glucose/galacto 99.5 3.1E-12 6.7E-17 137.6 26.5 153 524-696 147-299 (310)
115 KOG4686 Predicted sugar transp 99.5 8E-14 1.7E-18 146.3 12.2 144 3-146 41-188 (459)
116 TIGR00880 2_A_01_02 Multidrug 99.5 4.2E-13 9E-18 122.0 12.6 138 47-186 4-141 (141)
117 KOG3626 Organic anion transpor 99.4 1.3E-11 2.8E-16 144.8 24.7 180 6-186 97-345 (735)
118 KOG2325 Predicted transporter/ 99.4 5.5E-12 1.2E-16 142.7 14.9 185 3-188 31-234 (488)
119 TIGR00889 2A0110 nucleoside tr 99.3 6.9E-11 1.5E-15 131.9 22.2 162 25-186 227-405 (418)
120 cd06174 MFS The Major Facilita 99.3 6.7E-11 1.5E-15 123.8 20.5 165 12-178 181-347 (352)
121 PF03137 OATP: Organic Anion T 99.3 9.6E-14 2.1E-18 160.3 -1.1 180 8-187 5-254 (539)
122 PRK09528 lacY galactoside perm 99.3 2.8E-11 6.1E-16 133.9 18.3 150 35-186 256-406 (420)
123 TIGR00710 efflux_Bcr_CflA drug 99.3 4.5E-11 9.8E-16 128.5 18.2 170 529-718 17-186 (385)
124 COG3104 PTR2 Dipeptide/tripept 99.3 2.5E-09 5.3E-14 120.8 32.4 147 28-176 44-199 (498)
125 TIGR01299 synapt_SV2 synaptic 99.3 1.3E-10 2.9E-15 138.7 23.5 139 44-186 598-736 (742)
126 TIGR00890 2A0111 Oxalate/Forma 99.3 5.8E-11 1.2E-15 126.1 18.2 149 25-175 224-374 (377)
127 PRK05122 major facilitator sup 99.3 2E-10 4.2E-15 125.6 22.1 159 24-186 234-392 (399)
128 TIGR00895 2A0115 benzoate tran 99.3 3.6E-11 7.9E-16 128.8 15.6 165 532-716 32-196 (398)
129 PRK10473 multidrug efflux syst 99.3 7.2E-11 1.6E-15 128.9 17.9 182 517-718 3-184 (392)
130 PRK03545 putative arabinose tr 99.3 1.2E-10 2.6E-15 127.5 19.6 150 556-716 39-188 (390)
131 PRK15011 sugar efflux transpor 99.3 3.3E-10 7.2E-15 124.6 22.5 155 27-185 237-392 (393)
132 TIGR00711 efflux_EmrB drug res 99.3 3.3E-11 7.1E-16 134.6 14.6 179 520-718 5-183 (485)
133 PRK11663 regulatory protein Uh 99.3 1.9E-10 4.2E-15 128.4 20.5 179 517-715 23-201 (434)
134 TIGR00879 SP MFS transporter, 99.3 1.3E-10 2.8E-15 127.1 18.4 176 9-186 287-473 (481)
135 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.2E-10 2.6E-15 129.3 18.1 180 518-717 9-194 (412)
136 PRK10054 putative transporter; 99.3 1.8E-10 4E-15 127.2 19.0 172 525-716 15-186 (395)
137 PRK12382 putative transporter; 99.3 3.4E-10 7.4E-15 123.6 20.8 159 22-184 232-390 (392)
138 PRK10213 nepI ribonucleoside t 99.3 2.6E-10 5.7E-15 126.0 19.8 151 556-717 50-200 (394)
139 TIGR00893 2A0114 d-galactonate 99.3 7.9E-11 1.7E-15 124.9 15.1 164 534-717 11-174 (399)
140 PF03209 PUCC: PUCC protein; 99.3 2.4E-08 5.3E-13 110.7 35.0 120 31-151 5-146 (403)
141 PRK10077 xylE D-xylose transpo 99.3 5.1E-10 1.1E-14 125.1 22.2 165 22-186 287-460 (479)
142 PRK09874 drug efflux system pr 99.2 3.6E-10 7.9E-15 123.1 19.4 161 23-185 236-400 (408)
143 TIGR00891 2A0112 putative sial 99.2 3.4E-10 7.4E-15 122.1 19.0 177 520-717 15-193 (405)
144 PRK14995 methyl viologen resis 99.2 2.2E-10 4.8E-15 130.3 18.3 181 518-718 7-188 (495)
145 PRK09556 uhpT sugar phosphate 99.2 5.1E-10 1.1E-14 126.2 21.0 167 10-178 262-444 (467)
146 PRK11551 putative 3-hydroxyphe 99.2 7.9E-10 1.7E-14 121.0 21.6 154 25-180 239-393 (406)
147 PF03092 BT1: BT1 family; Int 99.2 1.5E-09 3.2E-14 122.5 23.8 156 27-185 11-177 (433)
148 PLN00028 nitrate transmembrane 99.2 5.8E-10 1.3E-14 126.5 20.7 177 515-713 35-220 (476)
149 PRK10504 putative transporter; 99.2 3.7E-10 8E-15 126.5 18.9 175 522-716 15-189 (471)
150 TIGR00899 2A0120 sugar efflux 99.2 1.4E-09 3.1E-14 116.7 21.6 150 31-184 225-374 (375)
151 PRK10489 enterobactin exporter 99.2 7.7E-10 1.7E-14 122.2 19.9 159 26-186 243-402 (417)
152 TIGR00900 2A0121 H+ Antiporter 99.2 7.2E-10 1.6E-14 117.4 18.7 163 533-710 15-177 (365)
153 PRK15402 multidrug efflux syst 99.2 8.2E-10 1.8E-14 121.4 19.3 151 556-717 43-193 (406)
154 TIGR00881 2A0104 phosphoglycer 99.2 1.5E-10 3.2E-15 123.1 12.9 164 533-716 11-175 (379)
155 PRK15403 multidrug efflux syst 99.2 7.6E-10 1.6E-14 123.2 18.5 152 555-717 45-196 (413)
156 PF07690 MFS_1: Major Facilita 99.2 2.5E-10 5.5E-15 120.5 13.9 150 555-715 26-175 (352)
157 PRK10091 MFS transport protein 99.2 9.6E-10 2.1E-14 120.3 18.2 164 534-717 20-183 (382)
158 PRK12307 putative sialic acid 99.2 1.1E-09 2.4E-14 120.7 18.1 147 532-698 33-179 (426)
159 TIGR00902 2A0127 phenyl propri 99.2 3.3E-09 7E-14 116.3 21.7 155 19-177 218-373 (382)
160 PRK03633 putative MFS family t 99.1 3.4E-09 7.3E-14 115.8 21.7 148 25-177 219-366 (381)
161 COG2814 AraJ Arabinose efflux 99.1 1.8E-09 4E-14 119.9 19.6 170 524-713 20-189 (394)
162 TIGR00883 2A0106 metabolite-pr 99.1 1.9E-09 4.1E-14 115.2 19.2 158 14-173 227-391 (394)
163 TIGR00886 2A0108 nitrite extru 99.1 1.6E-09 3.5E-14 116.1 18.5 168 528-715 12-191 (366)
164 PRK11273 glpT sn-glycerol-3-ph 99.1 2.1E-09 4.6E-14 120.6 20.3 153 557-716 59-212 (452)
165 PRK11102 bicyclomycin/multidru 99.1 9.1E-10 2E-14 118.9 16.4 161 536-716 10-170 (377)
166 KOG2816 Predicted transporter 99.1 2.5E-08 5.4E-13 113.6 28.5 171 9-186 25-202 (463)
167 PRK11652 emrD multidrug resist 99.1 1.9E-09 4E-14 117.9 18.8 182 515-717 7-188 (394)
168 PRK09952 shikimate transporter 99.1 6.4E-09 1.4E-13 116.6 23.5 157 30-187 275-436 (438)
169 TIGR00880 2_A_01_02 Multidrug 99.1 8.2E-10 1.8E-14 100.3 13.0 135 571-715 7-141 (141)
170 PRK15462 dipeptide/tripeptide 99.1 2.1E-09 4.5E-14 123.2 19.0 175 516-709 9-186 (493)
171 TIGR00712 glpT glycerol-3-phos 99.1 1.6E-09 3.6E-14 120.9 17.5 153 557-716 57-210 (438)
172 PRK03893 putative sialic acid 99.1 2.2E-09 4.9E-14 120.7 18.4 175 521-716 24-198 (496)
173 TIGR00903 2A0129 major facilit 99.1 1.6E-09 3.6E-14 119.3 16.6 162 534-716 8-169 (368)
174 PRK11646 multidrug resistance 99.1 2.7E-09 5.9E-14 118.2 18.3 164 532-715 25-188 (400)
175 PRK03699 putative transporter; 99.1 6.3E-09 1.4E-13 114.4 20.3 163 13-178 212-375 (394)
176 TIGR00897 2A0118 polyol permea 99.1 1.1E-08 2.4E-13 112.9 22.2 161 14-178 230-396 (402)
177 TIGR00892 2A0113 monocarboxyla 99.1 1.5E-09 3.4E-14 122.3 15.5 161 15-177 250-415 (455)
178 PF01770 Folate_carrier: Reduc 99.1 1.9E-07 4.1E-12 104.4 31.3 159 28-188 26-186 (412)
179 TIGR00924 yjdL_sub1_fam amino 99.1 4.5E-09 9.7E-14 119.6 18.6 161 530-707 23-187 (475)
180 COG2271 UhpC Sugar phosphate p 99.1 3.9E-09 8.4E-14 117.0 17.0 185 516-720 28-217 (448)
181 PRK09705 cynX putative cyanate 99.0 1.2E-08 2.6E-13 112.5 20.8 163 21-187 220-385 (393)
182 TIGR00887 2A0109 phosphate:H+ 99.0 8.3E-09 1.8E-13 117.6 19.1 158 28-186 310-491 (502)
183 PRK10207 dipeptide/tripeptide 99.0 7.5E-09 1.6E-13 118.5 18.5 176 515-710 13-191 (489)
184 PRK11043 putative transporter; 99.0 1.1E-08 2.3E-13 112.3 19.0 148 555-714 35-182 (401)
185 TIGR00882 2A0105 oligosacchari 99.0 2.7E-08 5.8E-13 109.2 20.2 143 37-181 250-393 (396)
186 PRK08633 2-acyl-glycerophospho 99.0 1.3E-08 2.8E-13 126.3 19.8 155 30-185 257-412 (1146)
187 PRK11128 putative 3-phenylprop 99.0 4.8E-08 1E-12 107.0 21.8 146 27-176 226-372 (382)
188 PRK15075 citrate-proton sympor 99.0 5E-08 1.1E-12 108.9 22.3 142 18-161 250-397 (434)
189 PRK15034 nitrate/nitrite trans 99.0 3.8E-08 8.3E-13 112.0 21.4 188 514-716 31-236 (462)
190 TIGR00792 gph sugar (Glycoside 99.0 2.9E-08 6.3E-13 109.6 19.3 130 23-153 239-377 (437)
191 PF05631 DUF791: Protein of un 99.0 4.4E-07 9.5E-12 99.5 27.7 159 27-186 55-219 (354)
192 PRK06814 acylglycerophosphoeth 98.9 3.4E-08 7.4E-13 123.1 20.3 147 562-716 52-198 (1140)
193 TIGR00894 2A0114euk Na(+)-depe 98.9 1.1E-08 2.3E-13 114.9 14.2 151 555-714 70-221 (465)
194 PRK09584 tppB putative tripept 98.9 4.9E-08 1.1E-12 111.9 19.8 170 516-704 21-193 (500)
195 TIGR00898 2A0119 cation transp 98.9 3.2E-08 6.9E-13 112.0 17.6 147 32-186 349-497 (505)
196 PF05977 MFS_3: Transmembrane 98.9 9.6E-08 2.1E-12 110.5 20.8 151 25-177 237-388 (524)
197 COG0477 ProP Permeases of the 98.9 1.3E-07 2.8E-12 94.2 19.1 164 11-174 7-176 (338)
198 PRK10406 alpha-ketoglutarate t 98.9 1.9E-07 4.2E-12 104.2 22.5 158 26-186 263-426 (432)
199 TIGR00885 fucP L-fucose:H+ sym 98.9 8.7E-08 1.9E-12 107.0 19.6 162 536-714 22-210 (410)
200 COG2223 NarK Nitrate/nitrite t 98.9 4.3E-08 9.3E-13 108.8 16.6 150 555-714 43-195 (417)
201 TIGR02718 sider_RhtX_FptX side 98.9 1.4E-07 3E-12 103.4 20.4 148 28-177 230-385 (390)
202 PF11700 ATG22: Vacuole efflux 98.9 1.8E-07 3.8E-12 107.2 22.1 174 11-186 286-470 (477)
203 PRK11010 ampG muropeptide tran 98.9 2E-07 4.2E-12 106.7 21.7 156 28-186 245-405 (491)
204 PF06813 Nodulin-like: Nodulin 98.8 2.3E-07 5E-12 97.8 18.4 177 5-187 2-185 (250)
205 TIGR00901 2A0125 AmpG-related 98.8 1.3E-07 2.8E-12 101.9 17.0 122 19-140 222-355 (356)
206 KOG2615 Permease of the major 98.8 3.4E-08 7.4E-13 108.3 12.1 145 562-717 68-218 (451)
207 COG2270 Permeases of the major 98.8 2.1E-07 4.7E-12 103.5 17.9 178 6-186 254-431 (438)
208 PRK11195 lysophospholipid tran 98.8 6E-07 1.3E-11 99.3 20.8 142 30-173 230-372 (393)
209 TIGR01301 GPH_sucrose GPH fami 98.8 2.2E-07 4.7E-12 106.4 17.6 188 518-717 6-223 (477)
210 PF06609 TRI12: Fungal trichot 98.7 7.8E-08 1.7E-12 112.3 13.5 139 562-711 78-216 (599)
211 TIGR00896 CynX cyanate transpo 98.7 1.9E-07 4.1E-12 100.7 15.2 152 531-704 14-167 (355)
212 PRK09848 glucuronide transport 98.7 7.5E-07 1.6E-11 99.8 20.3 130 23-152 245-384 (448)
213 PTZ00207 hypothetical protein; 98.7 3.4E-07 7.4E-12 107.1 17.9 165 533-714 43-207 (591)
214 PF01306 LacY_symp: LacY proto 98.7 6.7E-07 1.5E-11 100.3 18.7 172 14-188 233-405 (412)
215 KOG0255 Synaptic vesicle trans 98.7 1.9E-07 4.1E-12 106.8 14.4 139 563-715 119-257 (521)
216 KOG0569 Permease of the major 98.7 1.5E-06 3.2E-11 99.5 21.3 171 12-186 276-457 (485)
217 PRK11902 ampG muropeptide tran 98.7 1.7E-06 3.6E-11 95.6 20.9 144 29-178 233-385 (402)
218 PRK10133 L-fucose transporter; 98.7 1.2E-06 2.7E-11 98.6 19.8 136 533-685 42-177 (438)
219 TIGR00806 rfc RFC reduced fola 98.6 1.3E-06 2.9E-11 99.4 19.6 157 535-713 44-203 (511)
220 KOG1330 Sugar transporter/spin 98.6 2.7E-08 6E-13 111.4 5.9 158 555-723 62-220 (493)
221 TIGR01272 gluP glucose/galacto 98.6 2.5E-06 5.4E-11 92.0 20.4 155 11-170 145-302 (310)
222 TIGR00805 oat sodium-independe 98.6 2.5E-07 5.3E-12 109.4 13.2 159 555-715 62-283 (633)
223 KOG2532 Permease of the major 98.6 9.6E-07 2.1E-11 100.9 16.0 151 554-713 66-217 (466)
224 KOG0254 Predicted transporter 98.6 1.4E-06 3E-11 100.1 17.3 139 565-715 92-232 (513)
225 PRK10429 melibiose:sodium symp 98.5 4.3E-06 9.4E-11 94.9 20.1 133 20-152 245-389 (473)
226 PRK09669 putative symporter Ya 98.5 6E-06 1.3E-10 92.6 20.5 130 23-152 246-384 (444)
227 PF03825 Nuc_H_symport: Nucleo 98.5 9.3E-06 2E-10 91.1 21.7 175 12-186 213-398 (400)
228 KOG2504 Monocarboxylate transp 98.5 1.2E-06 2.6E-11 101.1 14.4 174 8-184 300-476 (509)
229 KOG3098 Uncharacterized conser 98.5 5.2E-05 1.1E-09 86.3 26.8 105 47-152 56-160 (461)
230 COG3104 PTR2 Dipeptide/tripept 98.5 1.9E-06 4.1E-11 97.8 15.2 182 516-711 21-205 (498)
231 KOG3762 Predicted transporter 98.5 7.3E-07 1.6E-11 101.5 11.7 158 533-710 387-545 (618)
232 KOG3764 Vesicular amine transp 98.5 4.6E-07 1E-11 100.1 9.4 147 563-719 107-254 (464)
233 PF13347 MFS_2: MFS/sugar tran 98.5 5E-06 1.1E-10 92.8 17.6 142 11-153 230-381 (428)
234 KOG0253 Synaptic vesicle trans 98.4 1.7E-06 3.7E-11 94.8 11.8 175 2-186 325-522 (528)
235 TIGR00769 AAA ADP/ATP carrier 98.2 0.021 4.5E-07 65.8 43.1 142 9-154 10-189 (472)
236 KOG0637 Sucrose transporter an 98.2 1.7E-05 3.7E-10 89.2 14.3 126 26-151 52-200 (498)
237 COG2211 MelB Na+/melibiose sym 98.2 7.8E-05 1.7E-09 85.0 19.1 138 13-150 243-390 (467)
238 PRK11462 putative transporter; 98.2 0.00025 5.3E-09 80.7 22.7 131 20-150 242-381 (460)
239 PF02487 CLN3: CLN3 protein; 98.1 0.0032 6.9E-08 70.9 30.2 133 47-185 65-197 (402)
240 KOG2533 Permease of the major 98.1 3.1E-05 6.6E-10 89.3 14.7 150 556-716 76-231 (495)
241 TIGR00926 2A1704 Peptide:H+ sy 98.1 7E-05 1.5E-09 89.1 18.1 153 26-178 8-177 (654)
242 TIGR00788 fbt folate/biopterin 98.1 2.3E-05 5E-10 89.3 12.8 120 34-153 281-410 (468)
243 COG2807 CynX Cyanate permease 98.1 0.00024 5.2E-09 78.3 19.6 163 18-184 220-386 (395)
244 PF00083 Sugar_tr: Sugar (and 98.0 9.8E-08 2.1E-12 106.2 -7.9 144 564-715 48-194 (451)
245 PF06813 Nodulin-like: Nodulin 98.0 0.0001 2.2E-09 77.9 15.1 165 531-712 16-181 (250)
246 KOG0252 Inorganic phosphate tr 98.0 3.8E-05 8.3E-10 86.5 12.3 120 559-684 81-203 (538)
247 KOG2816 Predicted transporter 98.0 8.7E-05 1.9E-09 84.9 15.4 138 571-721 71-208 (463)
248 PF06779 DUF1228: Protein of u 98.0 3.5E-05 7.6E-10 68.4 9.5 81 18-98 4-84 (85)
249 PF05978 UNC-93: Ion channel r 98.0 0.00023 5E-09 70.1 16.0 109 44-153 40-148 (156)
250 PF06963 FPN1: Ferroportin1 (F 98.0 0.062 1.3E-06 61.3 38.2 169 8-178 4-195 (432)
251 KOG4686 Predicted sugar transp 98.0 0.00017 3.7E-09 77.1 14.8 121 31-153 290-411 (459)
252 KOG3762 Predicted transporter 97.9 5.6E-05 1.2E-09 86.6 11.6 154 23-178 388-542 (618)
253 KOG4332 Predicted sugar transp 97.9 0.00041 8.8E-09 73.7 16.1 103 31-136 62-165 (454)
254 KOG3810 Micronutrient transpor 97.8 0.00036 7.8E-09 76.4 13.9 153 34-188 34-187 (433)
255 KOG1237 H+/oligopeptide sympor 97.7 0.019 4.2E-07 67.6 28.6 161 25-190 57-249 (571)
256 KOG2563 Permease of the major 97.7 0.00061 1.3E-08 76.9 15.1 127 560-688 77-203 (480)
257 PF05631 DUF791: Protein of un 97.7 0.0028 6.1E-08 70.0 18.8 153 556-719 64-223 (354)
258 COG0738 FucP Fucose permease [ 97.6 0.0034 7.3E-08 70.3 19.5 163 9-176 239-402 (422)
259 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.0013 2.9E-08 78.3 17.6 152 556-710 18-180 (654)
260 PF12832 MFS_1_like: MFS_1 lik 97.6 0.00061 1.3E-08 59.3 9.7 71 11-81 5-75 (77)
261 KOG3574 Acetyl-CoA transporter 97.4 0.012 2.5E-07 65.7 19.2 142 8-152 33-191 (510)
262 PF03209 PUCC: PUCC protein; 97.2 0.02 4.4E-07 64.3 19.3 149 28-176 231-391 (403)
263 TIGR00939 2a57 Equilibrative N 97.2 0.4 8.8E-06 54.8 29.2 38 643-680 390-427 (437)
264 KOG2325 Predicted transporter/ 96.9 0.0083 1.8E-07 69.0 12.7 146 563-716 72-233 (488)
265 PF13000 Acatn: Acetyl-coenzym 96.7 0.17 3.7E-06 58.5 20.4 141 10-153 4-177 (544)
266 PF03092 BT1: BT1 family; Int 96.4 0.031 6.7E-07 63.5 12.9 155 555-718 19-181 (433)
267 TIGR00769 AAA ADP/ATP carrier 96.4 0.13 2.8E-06 59.4 18.0 127 560-686 42-190 (472)
268 COG0477 ProP Permeases of the 96.4 0.14 3.1E-06 50.8 16.0 129 565-701 42-174 (338)
269 PRK03612 spermidine synthase; 96.3 0.34 7.3E-06 56.7 20.9 144 32-178 41-192 (521)
270 PF00854 PTR2: POT family; In 96.3 0.016 3.4E-07 64.0 9.4 104 72-177 2-117 (372)
271 PF03219 TLC: TLC ATP/ADP tran 96.3 3.3 7.1E-05 48.3 40.9 145 7-155 25-205 (491)
272 PF12832 MFS_1_like: MFS_1 lik 95.9 0.033 7.1E-07 48.5 7.6 66 526-601 9-74 (77)
273 PF06963 FPN1: Ferroportin1 (F 95.8 0.26 5.6E-06 56.4 16.0 151 11-161 263-423 (432)
274 PF05978 UNC-93: Ion channel r 95.7 0.27 5.8E-06 48.6 13.9 143 527-684 6-148 (156)
275 KOG3098 Uncharacterized conser 95.4 0.65 1.4E-05 53.5 17.7 103 43-146 281-404 (461)
276 PF01770 Folate_carrier: Reduc 95.3 0.77 1.7E-05 52.2 17.4 123 556-689 35-157 (412)
277 PF07672 MFS_Mycoplasma: Mycop 94.8 1.8 3.8E-05 46.5 17.3 57 126-182 2-61 (267)
278 PF02487 CLN3: CLN3 protein; 94.5 0.52 1.1E-05 53.4 13.4 138 11-153 252-394 (402)
279 PRK03612 spermidine synthase; 94.4 2.1 4.5E-05 50.2 18.6 50 659-708 143-193 (521)
280 PF03219 TLC: TLC ATP/ADP tran 94.4 3 6.5E-05 48.6 19.6 143 542-686 41-205 (491)
281 KOG0637 Sucrose transporter an 94.0 0.057 1.2E-06 61.6 4.6 155 516-682 32-200 (498)
282 PF00854 PTR2: POT family; In 93.9 0.2 4.4E-06 55.2 8.7 118 593-711 2-122 (372)
283 KOG1479 Nucleoside transporter 93.7 12 0.00027 42.6 22.2 107 18-126 30-148 (406)
284 COG3202 ATP/ADP translocase [E 92.7 25 0.00054 41.1 33.4 142 9-154 30-208 (509)
285 COG3202 ATP/ADP translocase [E 90.9 16 0.00036 42.5 18.8 130 558-687 58-210 (509)
286 PF03137 OATP: Organic Anion T 89.1 0.087 1.9E-06 61.8 -1.0 131 555-686 32-202 (539)
287 KOG1237 H+/oligopeptide sympor 89.0 12 0.00027 44.4 16.6 153 557-710 69-243 (571)
288 KOG3880 Predicted small molecu 87.0 5.2 0.00011 44.2 10.8 132 49-186 70-201 (409)
289 PF06779 DUF1228: Protein of u 84.8 5.7 0.00012 35.5 8.2 68 537-614 12-79 (85)
290 KOG4332 Predicted sugar transp 83.7 1.7 3.7E-05 47.1 5.2 153 556-724 67-232 (454)
291 KOG3574 Acetyl-CoA transporter 80.9 10 0.00022 43.2 10.0 181 515-713 30-237 (510)
292 KOG3626 Organic anion transpor 79.5 9.5 0.00021 46.5 10.0 131 555-686 126-298 (735)
293 TIGR00939 2a57 Equilibrative N 78.8 16 0.00034 42.1 11.1 111 42-153 308-431 (437)
294 COG4262 Predicted spermidine s 75.0 1.1E+02 0.0024 34.8 15.6 115 31-147 32-156 (508)
295 KOG1479 Nucleoside transporter 72.3 1.1E+02 0.0023 35.2 15.3 19 529-547 30-48 (406)
296 KOG3097 Predicted membrane pro 71.4 22 0.00049 39.7 9.3 71 53-124 70-140 (390)
297 COG1230 CzcD Co/Zn/Cd efflux s 68.0 68 0.0015 35.2 12.2 31 663-693 157-187 (296)
298 PF01733 Nucleoside_tran: Nucl 58.7 2.9 6.3E-05 45.3 -0.3 111 568-680 188-303 (309)
299 PF06027 DUF914: Eukaryotic pr 57.6 1.1E+02 0.0024 34.1 11.7 18 510-527 127-144 (334)
300 PF11947 DUF3464: Protein of u 55.3 30 0.00066 34.3 6.1 89 584-676 56-145 (153)
301 PRK10263 DNA translocase FtsK; 53.0 1.1E+02 0.0023 40.1 11.7 28 672-699 142-169 (1355)
302 KOG3880 Predicted small molecu 48.9 46 0.00099 37.1 6.8 137 11-152 256-400 (409)
303 PRK12438 hypothetical protein; 48.2 1.7E+02 0.0037 37.2 12.3 19 159-177 281-299 (991)
304 COG1230 CzcD Co/Zn/Cd efflux s 48.1 4.2E+02 0.009 29.2 14.1 82 2-89 21-105 (296)
305 PF03547 Mem_trans: Membrane t 47.2 1.3E+02 0.0028 33.2 10.4 13 577-589 10-22 (385)
306 PF02990 EMP70: Endomembrane p 44.0 2E+02 0.0044 33.9 11.7 25 506-531 251-275 (521)
307 PF01733 Nucleoside_tran: Nucl 43.1 9.5 0.00021 41.4 0.6 107 45-151 186-305 (309)
308 COG2274 SunT ABC-type bacterio 42.5 5.1E+02 0.011 32.0 15.0 25 565-589 160-184 (709)
309 PF05297 Herpes_LMP1: Herpesvi 42.1 8.4 0.00018 41.6 0.0 14 588-601 71-84 (381)
310 PF12670 DUF3792: Protein of u 40.0 3.2E+02 0.0069 25.6 13.1 36 574-609 46-82 (116)
311 COG3619 Predicted membrane pro 39.2 4.9E+02 0.011 27.5 16.7 66 5-70 11-84 (226)
312 COG5336 Uncharacterized protei 37.1 1.1E+02 0.0024 28.8 6.3 39 44-82 45-84 (116)
313 PF10225 DUF2215: Uncharacteri 35.1 2.6E+02 0.0056 29.9 9.8 107 78-186 14-122 (249)
314 COG5336 Uncharacterized protei 31.4 71 0.0015 30.1 4.2 34 656-689 37-70 (116)
315 TIGR01667 YCCS_YHJK integral m 31.0 5.5E+02 0.012 31.7 12.8 33 581-613 42-78 (701)
316 PF06123 CreD: Inner membrane 30.4 3.6E+02 0.0077 31.3 10.5 118 571-709 300-422 (430)
317 PF06912 DUF1275: Protein of u 29.8 6E+02 0.013 25.7 19.7 43 45-87 50-95 (209)
318 PRK11715 inner membrane protei 29.5 3.5E+02 0.0076 31.4 10.3 74 579-666 314-392 (436)
319 PF11947 DUF3464: Protein of u 29.3 1.7E+02 0.0036 29.2 6.7 81 63-146 56-146 (153)
320 PF03699 UPF0182: Uncharacteri 28.9 7.1E+02 0.015 31.1 13.2 20 159-178 269-288 (774)
321 COG2233 UraA Xanthine/uracil p 27.7 3.5E+02 0.0076 31.6 9.8 126 7-134 17-145 (451)
322 TIGR01666 YCCS hypothetical me 27.2 1E+03 0.022 29.5 14.2 32 581-612 42-77 (704)
323 PF07672 MFS_Mycoplasma: Mycop 26.9 5E+02 0.011 28.2 10.2 102 44-146 144-255 (267)
324 PF13000 Acatn: Acetyl-coenzym 26.9 8.8E+02 0.019 29.0 12.8 52 94-145 404-456 (544)
325 KOG1277 Endosomal membrane pro 26.3 4.5E+02 0.0098 30.8 10.1 16 573-588 334-349 (593)
326 TIGR00801 ncs2 uracil-xanthine 25.8 1E+03 0.022 27.1 16.4 121 8-132 7-132 (415)
327 PF07760 DUF1616: Protein of u 24.1 4.7E+02 0.01 28.3 9.7 56 97-155 22-77 (287)
328 KOG3810 Micronutrient transpor 23.3 2E+02 0.0043 32.8 6.6 96 42-137 272-369 (433)
329 COG4769 Predicted membrane pro 23.2 1.8E+02 0.0039 29.5 5.6 51 53-109 85-135 (181)
330 TIGR03173 pbuX xanthine permea 22.6 1.1E+03 0.025 26.5 14.5 100 29-129 15-116 (406)
331 PF05313 Pox_P21: Poxvirus P21 21.7 5E+02 0.011 26.7 8.4 22 654-675 110-131 (189)
332 PRK10263 DNA translocase FtsK; 21.6 7.2E+02 0.016 33.0 11.7 19 51-69 62-80 (1355)
333 PF06800 Sugar_transport: Suga 20.7 1.1E+03 0.024 25.6 14.5 53 660-719 198-250 (269)
334 PTZ00265 multidrug resistance 20.3 2.2E+03 0.048 29.0 17.0 18 159-176 195-212 (1466)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.1e-42 Score=384.98 Aligned_cols=445 Identities=30% Similarity=0.482 Sum_probs=373.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHH--------HhhC--CCh----hHHHHHHHHHHHHHHHHHHhHHHHHhhhC
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIK--------KDLN--LGT----TVEGLVVAMSLIGATAITTCSGPISDWLG 69 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~--------~dfG--lS~----s~iGLi~Sl~~~g~a~~~~~~G~LsDRfG 69 (738)
...+.+.+.++.+-.+|..+.++...+.+. +.+| .++ ...+.+.+++.+|.++|+++.+.++||+|
T Consensus 9 L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~G 88 (485)
T KOG0569|consen 9 LLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFG 88 (485)
T ss_pred HHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 344555667777888899888887655333 3455 444 34556889999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhh
Q 004673 70 RRPMLILSSVLYFVSGLVMLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (738)
Q Consensus 70 RR~~LliglvI~aI~s~~~af---a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~ 146 (738)
||..++++.++..++.+++.+ .+++.+++++|++.|+.+|......+.|+.|..|.+.||.+.++.+++..+|..++
T Consensus 89 RK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~ 168 (485)
T KOG0569|consen 89 RKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLG 168 (485)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHH
Confidence 999999999999888888876 46899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCCchhhhc-cCcchHHHHHHHHhhccccchhHHHHHHhhhcc
Q 004673 147 YCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVS-KGKMLEAKQVLQRLRGREDVSGEMALLVEGLGI 225 (738)
Q Consensus 147 ~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (738)
...+....+.....|++.+.+..+++++.+ +.+.++||||||+.. |++.+||++.++.+++.++.+.+.+...+
T Consensus 169 ~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~---- 243 (485)
T KOG0569|consen 169 QVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLR---- 243 (485)
T ss_pred HHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHH----
Confidence 777777766677789999999999988866 448999999999987 89999999999999998754332221000
Q ss_pred CCccchhhhhcCCCCCCCCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCcccccccccc
Q 004673 226 GGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVH 305 (738)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (738)
T Consensus 244 -------------------------------------------------------------------------------- 243 (485)
T KOG0569|consen 244 -------------------------------------------------------------------------------- 243 (485)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCcccccccccccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccccccCCCCC
Q 004673 306 EKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSH 385 (738)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (738)
| ..|
T Consensus 244 -----------------------------------e--------------------------------~~~--------- 247 (485)
T KOG0569|consen 244 -----------------------------------E--------------------------------IEE--------- 247 (485)
T ss_pred -----------------------------------H--------------------------------HHH---------
Confidence 0 000
Q ss_pred CcchhhccccccccCCCccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCCCCCCCchh
Q 004673 386 GSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGE 465 (738)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (738)
T Consensus 248 -------------------------------------------------------------------------------- 247 (485)
T KOG0569|consen 248 -------------------------------------------------------------------------------- 247 (485)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhhccchhhhhhcccCCCCCCCCCCCCccccCCChHH-HHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHH
Q 004673 466 YIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWA-ALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQIL 544 (738)
Q Consensus 466 ~~~a~av~~i~~lyvR~~v~Esp~f~~~~~~~e~~kk~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (738)
++.++++..++. .+.++..++.+.+++.+...++++|.+.+.+|...++
T Consensus 248 ------------------------------~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~ 297 (485)
T KOG0569|consen 248 ------------------------------EELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIF 297 (485)
T ss_pred ------------------------------hccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHH
Confidence 000001223333 3445577788999999999999999999999999999
Q ss_pred HhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 004673 545 EQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKA 624 (738)
Q Consensus 545 ~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~ 624 (738)
+++|++ ...+...+...++..++.++++.+++||+|||+++++++.++.+..+++.+..........+..
T Consensus 298 ~~aG~~----------~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 367 (485)
T KOG0569|consen 298 KTAGFT----------PEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLS 367 (485)
T ss_pred HHcCCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 998875 3566677788899999999999999999999999999999999999999888776633333444
Q ss_pred hHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHH
Q 004673 625 GISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFIS 704 (738)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 704 (738)
...+++.++|.+.|+.+.+|+++.+.+|++|++.|..+.+++.+++|++.++..++++.+.+.+|- ..|+++.+.+++.
T Consensus 368 y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~ 446 (485)
T KOG0569|consen 368 YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIF 446 (485)
T ss_pred HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999996 6889999999999
Q ss_pred HHHHHHhccCCCCCChhhhHHhhhcc
Q 004673 705 WVFVFLRVPETKGMPLEVITEFFAVG 730 (738)
Q Consensus 705 ~~~~~~~~~e~~~~~l~~~~~~~~~~ 730 (738)
.++.++++||||||+.+++.+.+++.
T Consensus 447 ~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 447 LIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 99999999999999999998888766
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1e-39 Score=371.40 Aligned_cols=446 Identities=35% Similarity=0.673 Sum_probs=368.5
Q ss_pred HHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHhhC-----CCh--hHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHH
Q 004673 4 AALVAIAATIGNFLQGWD--NATIAGAIVYIKKDLN-----LGT--TVEGLVVAMSLIGATAITTCSGPISDWLGRRPML 74 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~--~~~~~~~lp~L~~dfG-----lS~--s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~L 74 (738)
.........++.+..+++ .+..+++...+.++.. .+. .+.+|+.+++.+|..++++++|+++|++|||+++
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l 122 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL 122 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 345566677888888886 5666667777776432 222 3458999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHH
Q 004673 75 ILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS 154 (738)
Q Consensus 75 liglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~ 154 (738)
+++.+++.++.+++++++|+++++++|++.|+|.|....+.+.|++|..|++.||...++.+....+|..++++.+....
T Consensus 123 ~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 123 LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999977766654
Q ss_pred HhccchhHHHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhcc--ccchhHHHHHHhhhccCCccchh
Q 004673 155 LLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGR--EDVSGEMALLVEGLGIGGETSIE 232 (738)
Q Consensus 155 l~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 232 (738)
.. ..+||.++++..+++++..+. .+++||+|||+..+++.+++++.++++++. ++...+.+.+..
T Consensus 203 ~~-~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~----------- 269 (513)
T KOG0254|consen 203 KV-YAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKI----------- 269 (513)
T ss_pred cC-CccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHH-----------
Confidence 33 258999999999999887766 999999999999999999999999999873 222222111100
Q ss_pred hhhcCCCCCCCCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCccccccccccccCCCCC
Q 004673 233 EYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESG 312 (738)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (738)
+. +.
T Consensus 270 --------------------~~-------------------------------------------------~~------- 273 (513)
T KOG0254|consen 270 --------------------KL-------------------------------------------------LV------- 273 (513)
T ss_pred --------------------HH-------------------------------------------------HH-------
Confidence 00 00
Q ss_pred CcccccccccccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccccccCCCCCCcchhhc
Q 004673 313 SMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMR 392 (738)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (738)
T Consensus 274 -------------------------------------------------------------------------------- 273 (513)
T KOG0254|consen 274 -------------------------------------------------------------------------------- 273 (513)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCCCCCCCchhHHHhhhh
Q 004673 393 RHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAAL 472 (738)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~av 472 (738)
T Consensus 274 -------------------------------------------------------------------------------- 273 (513)
T KOG0254|consen 274 -------------------------------------------------------------------------------- 273 (513)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhhhcccCCCCCCCCCCCCccccCCChHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhh
Q 004673 473 VSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVL 552 (738)
Q Consensus 473 ~~i~~lyvR~~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 552 (738)
+....++...+.+++.+..+++..+++.++.++|+++++.+.+|.+++++..|.+
T Consensus 274 -----------------------~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~-- 328 (513)
T KOG0254|consen 274 -----------------------EAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLK-- 328 (513)
T ss_pred -----------------------hhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCC--
Confidence 0000001113555666667889999999999999999999999999999998764
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhHHHH
Q 004673 553 LSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLI---SPVLKAGISTA 629 (738)
Q Consensus 553 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~---s~~~~~~~~~~ 629 (738)
... .+.+++.++..+++.+++++++||+|||++++.+...++++++++......... ......+..+.
T Consensus 329 -------~~~--~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (513)
T KOG0254|consen 329 -------SDT--FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIV 399 (513)
T ss_pred -------Cch--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHH
Confidence 111 555666778888899999999999999999999999999999999887766522 12344567788
Q ss_pred HHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHH-HH
Q 004673 630 CVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWV-FV 708 (738)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~ 708 (738)
+.+++...|..++++++|.++.|++|.+.|+.+.+++..++|+...+....+..+....+....|.++++++.+.++ ++
T Consensus 400 ~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv 479 (513)
T KOG0254|consen 400 FLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFV 479 (513)
T ss_pred HHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999998887656788899999999888 89
Q ss_pred HHhccCCCCCChhhhHHhhhcccc
Q 004673 709 FLRVPETKGMPLEVITEFFAVGAR 732 (738)
Q Consensus 709 ~~~~~e~~~~~l~~~~~~~~~~~~ 732 (738)
++++|||||+++|++++.+.+...
T Consensus 480 ~~~~pETkg~sleei~~~~~~~~~ 503 (513)
T KOG0254|consen 480 FFFVPETKGLTLEEINELFEEGIK 503 (513)
T ss_pred eEEcccCCCCcHHHHHHHHHcCCc
Confidence 999999999999999998877643
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=8e-39 Score=362.07 Aligned_cols=442 Identities=21% Similarity=0.241 Sum_probs=311.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhh-----CCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDL-----NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL 76 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~df-----GlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~Lli 76 (738)
++.+.++.++.++.++++++.+.++.++|.+..++ ..+..+.+++.+++.+++.++++++|+++||+|||+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 35667788899999999999999999999887753 3556778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHH
Q 004673 77 SSVLYFVSGLVMLWSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (738)
Q Consensus 77 glvI~aI~s~~~afa~~------~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~ 150 (738)
+.+++++++++++++++ ++.++++|++.|++.|...+...+++.|++|+++||+++++.+.+..+|.++++.+.
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998765 789999999999999999999999999999999999999999999999999987766
Q ss_pred HHHHH---------------------hccchhHHHHHHHHHHHHHHHHHHhhcccCCchhhhccCcch-HHHHHHHHhhc
Q 004673 151 FGMSL---------------------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKML-EAKQVLQRLRG 208 (738)
Q Consensus 151 ~~l~l---------------------~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~-~a~~~~~~~~~ 208 (738)
..... ...++||++|.+.++++++.+ +..+++||||||+..+++.+ ++++.+++...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~ 250 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQ 250 (502)
T ss_pred HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhc
Confidence 54321 112479999988888777654 44688999999998888764 35555554432
Q ss_pred cccchhHHHHHHhhhccCCccchhhhhcCCCCCCCCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCC
Q 004673 209 REDVSGEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLAN 288 (738)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (738)
.+.. ++ .++.++
T Consensus 251 ~~~~---------------------------~~-------~~~~~~---------------------------------- 262 (502)
T TIGR00887 251 VKIE---------------------------AE-------PDEVEK---------------------------------- 262 (502)
T ss_pred cccc---------------------------cC-------cccccc----------------------------------
Confidence 1100 00 000000
Q ss_pred CCcccCCccccccccccccCCCCCCcccccccccccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCcc
Q 004673 289 QSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLI 368 (738)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (738)
+
T Consensus 263 -------------------------------------------------------------------------------~ 263 (502)
T TIGR00887 263 -------------------------------------------------------------------------------A 263 (502)
T ss_pred -------------------------------------------------------------------------------h
Confidence 0
Q ss_pred ccccccccccccCCCCCCcchhhccccccccCCCccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCC
Q 004673 369 SRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSR 448 (738)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (738)
+++
T Consensus 264 ~~~----------------------------------------------------------------------------- 266 (502)
T TIGR00887 264 STA----------------------------------------------------------------------------- 266 (502)
T ss_pred hcc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred CCcccccCCCCCCCchhHHHhhhhhccchhhhhhcccCCCCCCCCCCCCccccCCChHHHHHHh----hhhhHHHHHHHH
Q 004673 449 RGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEA----GVKRALLVGVGI 524 (738)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~a~av~~i~~lyvR~~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~----~~~~~~~~~~~~ 524 (738)
.+ .....+++++++ +.++. .+++.+
T Consensus 267 ------------------------------------------------~~--~~~~~~~~l~~~~~~~~~~~~-~~~~~~ 295 (502)
T TIGR00887 267 ------------------------------------------------VE--VPKASWSDFFTHFFKWRHGKH-LLGTAG 295 (502)
T ss_pred ------------------------------------------------cc--chhhhHHHHHHHHhhhHHHHH-HHHHHH
Confidence 00 000124444432 22222 232222
Q ss_pred HHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcC-CC-chhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 004673 525 QILQQFSGINGVLYYTPQILEQAGVEVLLSNLG-IS-SESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVL 602 (738)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~ 602 (738)
..+.+...++++..|.|.++++.|.+....... .. .-........+..++.+++.+++++++||+|||++++++..++
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~ 375 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFIL 375 (502)
T ss_pred HHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHH
Confidence 222333345567778899998765431000000 00 0001111233445677788899999999999999998888777
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHH
Q 004673 603 IVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLP 682 (738)
Q Consensus 603 ~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~ 682 (738)
+++++++.+..... ......+..+++.+.++.+..++.+++++|++|++.|+++.|+++++.++++++++.+.+
T Consensus 376 ~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~ 449 (502)
T TIGR00887 376 TVLFFVLGFAYNHL------STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFL 449 (502)
T ss_pred HHHHHHHHHHHHhc------chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhh
Confidence 77766665432110 001112222233333456677788899999999999999999999999999999999999
Q ss_pred HHHHh----------hcchhHHHHHHHHHHHHHHHHHHhccCCCCCChhhhHHh
Q 004673 683 VMLSS----------IGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEF 726 (738)
Q Consensus 683 ~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~ 726 (738)
.+.+. .++..+|++++++++++.++. +++||||++++|++|++
T Consensus 450 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 450 YLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSGE 502 (502)
T ss_pred hhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhCC
Confidence 99874 345567888888888876654 67899999999998753
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3.7e-38 Score=350.79 Aligned_cols=437 Identities=30% Similarity=0.543 Sum_probs=330.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhh--------CCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDL--------NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI 75 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~df--------GlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~Ll 75 (738)
...+++++.++.+.++++...+++..|.+++++ +.+..+.+++.+++.+++.++++++|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 355677778899999999999999999999888 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhh
Q 004673 76 LSSVLYFVSGLVMLWS------------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGM 143 (738)
Q Consensus 76 iglvI~aI~s~~~afa------------~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~ 143 (738)
++.++++++.++++++ .++..++++|+++|++.|...+...++++|++|+++||+++++.+.+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999999999888763 3357788999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHH------HhccchhHHHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccccchhHHH
Q 004673 144 FLAYCMVFGMS------LLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMA 217 (738)
Q Consensus 144 ~I~~~~~~~l~------l~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 217 (738)
+++++...... .....+||+.|++.++++++.+ +..+++||+|+++..+++.+++++..++....+......+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQ 248 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHH
Confidence 99866554332 1234699999999888877755 4467899999988777666665555444332211000000
Q ss_pred HHHhhhccCCccchhhhhcCCCCCCCCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCcc
Q 004673 218 LLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPL 297 (738)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (738)
.++
T Consensus 249 ------------------------------------~~~----------------------------------------- 251 (479)
T PRK10077 249 ------------------------------------EIK----------------------------------------- 251 (479)
T ss_pred ------------------------------------HHH-----------------------------------------
Confidence 000
Q ss_pred ccccccccccCCCCCCcccccccccccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccc
Q 004673 298 VTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEK 377 (738)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (738)
T Consensus 252 -------------------------------------------------------------------------------- 251 (479)
T PRK10077 252 -------------------------------------------------------------------------------- 251 (479)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCcchhhccccccccCCCccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCC
Q 004673 378 DMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPG 457 (738)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (738)
++
T Consensus 252 -----------------------------------------~~------------------------------------- 253 (479)
T PRK10077 252 -----------------------------------------HS------------------------------------- 253 (479)
T ss_pred -----------------------------------------HH-------------------------------------
Confidence 00
Q ss_pred CCCCCchhHHHhhhhhccchhhhhhcccCCCCCCCCCCCCccccCCChHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 004673 458 YDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVL 537 (738)
Q Consensus 458 ~~~~~~~~~~~a~av~~i~~lyvR~~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (738)
.+. ++.+... ++. ......+.++....++++.+++...
T Consensus 254 ----------------------~~~---------------~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (479)
T PRK10077 254 ----------------------LDH---------------GRKTGGK----LLM-FGVGVIVIGVMLSVFQQFVGINVVL 291 (479)
T ss_pred ----------------------HHH---------------hhhhhhh----hcc-hhHHHHHHHHHHHHHHHHhChhHHH
Confidence 000 0000000 000 0012334444555666777778888
Q ss_pred hhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 004673 538 YYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL 617 (738)
Q Consensus 538 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~ 617 (738)
+|.|.++++.|. +. ..+.+.....++..+++.+++++++||+|||++++.+..+++++++++.......
T Consensus 292 ~~~p~i~~~~g~---------~~-~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~- 360 (479)
T PRK10077 292 YYAPEIFKTLGA---------ST-DIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ- 360 (479)
T ss_pred HHHHHHHHHcCC---------CC-chHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence 899999887554 33 3334455566788889999999999999999999999998888877775432211
Q ss_pred hhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHH------Hhhcch
Q 004673 618 ISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML------SSIGLA 691 (738)
Q Consensus 618 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~------~~~g~~ 691 (738)
........+++++..++...+.+..+.+++|++|++.|+++.|+++++.+++.++++.+++.+. +..++.
T Consensus 361 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~ 436 (479)
T PRK10077 361 ----APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNG 436 (479)
T ss_pred ----cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCc
Confidence 0112333455556666666677888899999999999999999999999999999988887665 467888
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCChhhhHHhhhccccc
Q 004673 692 GAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQ 733 (738)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~ 733 (738)
..|.++++++++++++.+++.||||+++.|++++.+++..|+
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 478 (479)
T PRK10077 437 FSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPETKK 478 (479)
T ss_pred cHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhcccC
Confidence 889998988888888888889999999999999998776654
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.7e-37 Score=366.48 Aligned_cols=208 Identities=22% Similarity=0.288 Sum_probs=186.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~ 81 (738)
++.|.++++++++.++.+++...++.++|.+.++++++..+.+++.+++.+|++++++++|+++||+|||+++++++++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34677888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh-----
Q 004673 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL----- 156 (738)
Q Consensus 82 aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~----- 156 (738)
++++++++++++++.++++|++.|+|.|+..+...+++.|++|+++||++.++.++++.+|.++++.++......
T Consensus 243 ~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~ 322 (742)
T TIGR01299 243 GFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSF 322 (742)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 999999999999999999999999999999999999999999999999999999999999999987665443321
Q ss_pred ------ccchhHHHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccc
Q 004673 157 ------ASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGRE 210 (738)
Q Consensus 157 ------~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~ 210 (738)
...+||+.+++.++++++. ++.++++||+|+|+..+++.+++.+.++++...+
T Consensus 323 ~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 323 QMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred ccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 1247999999888777664 4557889999999999999999999999886654
No 6
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.6e-42 Score=383.40 Aligned_cols=432 Identities=35% Similarity=0.604 Sum_probs=337.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHH--HhhCCCh---------hHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVYIK--KDLNLGT---------TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSS 78 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~L~--~dfGlS~---------s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~Lligl 78 (738)
+..++.+.++|+...++...+... ..+..+. .+.+++.++..+|..+|++++|.++||+|||+++.++.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~ 83 (451)
T PF00083_consen 4 IASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISA 83 (451)
T ss_pred eeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 345677999999999887776554 2333222 35789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHH
Q 004673 79 VLYFVSGLVMLWSP---NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL 155 (738)
Q Consensus 79 vI~aI~s~~~afa~---~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l 155 (738)
++..+++++.++++ |++.++++|++.|++.|...+....++.|..|+++||+..++.+.+..+|.+++.........
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 84 LLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999 999999999999999999999999999999999999999999999999999998766655422
Q ss_pred hc-cchhHHHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccccchhHHHHHHhhhccCCccchhhh
Q 004673 156 LA-SPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEY 234 (738)
Q Consensus 156 ~~-~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (738)
.. ..+||+.+.+.++++++.+ +..+++||||||+..|+|.+|+++.++++++.+..+.+.+
T Consensus 164 ~~~~~~Wr~~~~~~~~~~l~~~-~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~----------------- 225 (451)
T PF00083_consen 164 YSDNWGWRILLIFGAIPSLLVL-LLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIE----------------- 225 (451)
T ss_pred cccccccccccccccccccccc-ccccccccccceeccccccccccccccccccccccccccc-----------------
Confidence 22 2469999999999887755 4568899999999999999999988887544321100000
Q ss_pred hcCCCCCCCCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCccccccccccccCCCCCCc
Q 004673 235 IIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSM 314 (738)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (738)
+ +. ++
T Consensus 226 ---------~------~~----------------------------------------------------~~-------- 230 (451)
T PF00083_consen 226 ---------E------IK----------------------------------------------------AE-------- 230 (451)
T ss_pred ---------c------cc----------------------------------------------------cc--------
Confidence 0 00 00
Q ss_pred ccccccccccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccccccCCCCCCcchhhccc
Q 004673 315 RSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRH 394 (738)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (738)
.|
T Consensus 231 ------------------------------------------------------------~~------------------ 232 (451)
T PF00083_consen 231 ------------------------------------------------------------KK------------------ 232 (451)
T ss_pred ------------------------------------------------------------cc------------------
Confidence 00
Q ss_pred cccccCCCccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCCCCCCCchhHHHhhhhhc
Q 004673 395 SSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVS 474 (738)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~av~~ 474 (738)
T Consensus 233 -------------------------------------------------------------------------------- 232 (451)
T PF00083_consen 233 -------------------------------------------------------------------------------- 232 (451)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhhcccCCCCCCCCCCCCccccCCChHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhh
Q 004673 475 QPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEA-GVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLL 553 (738)
Q Consensus 475 i~~lyvR~~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 553 (738)
+.++++..+.++++. +.++++++.+.+.+++++++++.+.+|.+.++++.+.+
T Consensus 233 -----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~--- 286 (451)
T PF00083_consen 233 -----------------------ESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGIS--- 286 (451)
T ss_pred -----------------------cccccceeeeeccccccccccccccccccccccccccccccccccccccccccc---
Confidence 000000223333333 23567788888888888999999999999999886653
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHH
Q 004673 554 SNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVII 633 (738)
Q Consensus 554 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 633 (738)
.. ...+.+..+..+++.+++.+++||+|||++++.+..+++++.+.+..........+.......+.+.++
T Consensus 287 ------~~---~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 357 (451)
T PF00083_consen 287 ------NS---FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLAL 357 (451)
T ss_pred ------cc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence 22 444455667777888888999999999999999988888877776511111101111123344555666
Q ss_pred HHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhcc
Q 004673 634 YFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP 713 (738)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 713 (738)
+.+++..+++++.+.+++|++|++.|+.+.|++..+.++++++.+.+.+.+.+..+....|.++++++++..+++++++|
T Consensus 358 ~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lp 437 (451)
T PF00083_consen 358 FFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLP 437 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEe
Confidence 77788888999999999999999999999999999999999999999999988888566888999999999999999999
Q ss_pred CCCCCChhhhHHhh
Q 004673 714 ETKGMPLEVITEFF 727 (738)
Q Consensus 714 e~~~~~l~~~~~~~ 727 (738)
||||+++|++++.|
T Consensus 438 ET~g~~l~ei~~~f 451 (451)
T PF00083_consen 438 ETKGKTLEEIQEMF 451 (451)
T ss_pred eCCCCCHHHHHhhC
Confidence 99999999999876
No 7
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=7e-35 Score=317.60 Aligned_cols=440 Identities=35% Similarity=0.635 Sum_probs=320.8
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCC--------hhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLG--------TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPML 74 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS--------~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~L 74 (738)
+.+...+++.++.++..++...++...+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~ 104 (481)
T TIGR00879 25 KVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL 104 (481)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH
Confidence 3455566677788889999999999999988888877 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHH-
Q 004673 75 ILSSVLYFVSGLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV- 150 (738)
Q Consensus 75 liglvI~aI~s~~~afa---~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~- 150 (738)
+++.++.+++.+++.+. .+++.++++|++.|+|.+...+...+++.|++|+++|++++++.+.+..+|.++++.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 105 LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999654 35568999999999999999999999999999999999999999999999999997766
Q ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccccchhHHHHHHhhhccCCccc
Q 004673 151 FGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETS 230 (738)
Q Consensus 151 ~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (738)
.........+||+.|++.++.+++ .++..+++||+|+++..+++.+++.+..++....++....
T Consensus 185 ~~~~~~~~~~w~~~f~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 248 (481)
T TIGR00879 185 GKVSLNNTLGWRIPLGLQLIPAGL-LFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKE--------------- 248 (481)
T ss_pred HhhcCCCCccHHHHHHHHHHHHHH-HHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHH---------------
Confidence 223334566999999996666555 4455678899998765554444433332221111000000
Q ss_pred hhhhhcCCCCCCCCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCccccccccccccCCC
Q 004673 231 IEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPE 310 (738)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (738)
..+...
T Consensus 249 --------------------~~~~~~------------------------------------------------------ 254 (481)
T TIGR00879 249 --------------------LLDELE------------------------------------------------------ 254 (481)
T ss_pred --------------------HHHHHH------------------------------------------------------
Confidence 000000
Q ss_pred CCCcccccccccccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccccccCCCCCCcchh
Q 004673 311 SGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILS 390 (738)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (738)
.. + ++...|++
T Consensus 255 -----------------------------~~---~-------------------------~~~~~~~~------------ 265 (481)
T TIGR00879 255 -----------------------------LI---D-------------------------IKRSIEKR------------ 265 (481)
T ss_pred -----------------------------HH---H-------------------------HHHHHHHh------------
Confidence 00 0 00000000
Q ss_pred hccccccccCCCccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCCCCCCCchhHHHhh
Q 004673 391 MRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAA 470 (738)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 470 (738)
T Consensus 266 -------------------------------------------------------------------------------- 265 (481)
T TIGR00879 266 -------------------------------------------------------------------------------- 265 (481)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccchhhhhhcccCCCCCCCCCCCCccccCCChHHHHHHh--hhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhh
Q 004673 471 ALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEA--GVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAG 548 (738)
Q Consensus 471 av~~i~~lyvR~~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 548 (738)
...+.+..+++. ...++.++...+..+.+....+.+.+|.|.++++.
T Consensus 266 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (481)
T TIGR00879 266 ------------------------------SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENA- 314 (481)
T ss_pred ------------------------------hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHc-
Confidence 000112223321 12345566666666666666777888888888774
Q ss_pred hhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--hhhhH
Q 004673 549 VEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPV--LKAGI 626 (738)
Q Consensus 549 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~--~~~~~ 626 (738)
|++. ..+.+...+..+..+++.+++++++||+|||+.+..+..+.+++++++.+..... .... .....
T Consensus 315 --------g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 384 (481)
T TIGR00879 315 --------GVST-DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASF-VTGSSKSSGNV 384 (481)
T ss_pred --------CCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcc-cCCcccchhHH
Confidence 4455 4445555667788899999999999999999999988777777766665322111 0000 01223
Q ss_pred HHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHH
Q 004673 627 STACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWV 706 (738)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 706 (738)
.+...+++..+++.+..+..+.++.|.+|++.|+++.|+++++.+++.++++.+.+.+.+..||...|++++++++++++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i 464 (481)
T TIGR00879 385 AIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLI 464 (481)
T ss_pred HHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHH
Confidence 34445556666777777888888899999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhccCCCCCChhh
Q 004673 707 FVFLRVPETKGMPLEV 722 (738)
Q Consensus 707 ~~~~~~~e~~~~~l~~ 722 (738)
+.+++.||+|+++.++
T Consensus 465 ~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 465 FVYFFLPETKGRTLEE 480 (481)
T ss_pred HHheecccCCCCChhh
Confidence 8888889999887654
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=6.4e-33 Score=313.34 Aligned_cols=185 Identities=19% Similarity=0.274 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhH-HHH-----HHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHH
Q 004673 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTV-EGL-----VVAMSLIGATAITTCSGPISDWLGRRPMLILSS 78 (738)
Q Consensus 5 ~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~-iGL-----i~Sl~~~g~a~~~~~~G~LsDRfGRR~~Lligl 78 (738)
+.+++...++++++++|...++...|.+.+++..+.+. ..+ +.++.++++.++++++|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34566778999999999999999999999998644321 122 257888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHH--------HHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHH
Q 004673 79 VLYFVSGLVMLWSPNVYV--------LCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (738)
Q Consensus 79 vI~aI~s~~~afa~~~~~--------liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~ 150 (738)
++++++++++++++|+.. ++++|+++|+|.|+.++...+++.|++|+++||++.++.+.+..+|.+++..+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 888999999999999999999999999999999999999999999998886554
Q ss_pred HHHHH------hccchhHHHHHHHHHHHHHHHHHHhhcccCCchhh
Q 004673 151 FGMSL------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWL 190 (738)
Q Consensus 151 ~~l~l------~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~ 190 (738)
..... ....|||++|++.++++++.+ +....+||+|+|.
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp~~~ 219 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETPAFQ 219 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCChhHH
Confidence 33321 235799999999877666533 4466789998764
No 9
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.6e-33 Score=315.10 Aligned_cols=176 Identities=31% Similarity=0.481 Sum_probs=157.8
Q ss_pred HHHHHHHHhhCCC---hhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 004673 27 GAIVYIKKDLNLG---TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (738)
Q Consensus 27 ~~lp~L~~dfGlS---~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l 103 (738)
...|.+.++++++ ..+.+++.+++.+|+.++.+++|+++||+|||++++++.++.+++.+++++++|++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4557788999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcc
Q 004673 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (738)
Q Consensus 104 ~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~fl 183 (738)
.|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.+.... . +||+.|++.++++++.+++ .+++
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~---~wr~~~~~~~i~~~~~~~~-~~~~ 263 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI--P---DWRWLQLAVSLPTFLFFLL-SWFV 263 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh--h---HHHHHHHHHHHHHHHHHHH-HHhc
Confidence 99999999999999999999999999999999999999999886554332 1 5999999999888776554 5789
Q ss_pred cCCchhhhccCcchHHHHHHHHhhc
Q 004673 184 PESPRWLVSKGKMLEAKQVLQRLRG 208 (738)
Q Consensus 184 pESp~~~~~~~~~~~a~~~~~~~~~ 208 (738)
||+|+|+..+++.+++.+.+++...
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~ 288 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAK 288 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHH
Confidence 9999999999998888877766543
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.5e-31 Score=289.92 Aligned_cols=185 Identities=24% Similarity=0.292 Sum_probs=168.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~ 81 (738)
++.|.++.++++..++++++...++...|.+.+++|+++.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 46788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchh
Q 004673 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (738)
Q Consensus 82 aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~W 161 (738)
+++.+++.+++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+. ....+..+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~ 168 (406)
T PRK11551 91 GLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIG--VLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccccCH
Confidence 999999999999999999999999999999999999999999999999999999999999999986554 334556799
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 162 RLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 162 r~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
|+.|++.+++.++.+++..+++||+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRA 195 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 999999888777666666777888864
No 11
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.6e-32 Score=303.39 Aligned_cols=185 Identities=17% Similarity=0.003 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
.+.++..+++++++.+.++..++...|.+.+++|++.++.|++.+++.+++++++++.|+++||+|||+++.++.++.++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 34567778888899999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHh-----hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh-c
Q 004673 84 SGLVMLW-----SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL-A 157 (738)
Q Consensus 84 ~s~~~af-----a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~-~ 157 (738)
++++.++ ++|++.++++|+++|++.+...+...+++.|++|+++||+++++.+.+.++|.++++.+....... .
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 7776665 589999999999999999999999999999999999999999999999999999997765443322 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 158 SPSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 158 ~~~Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
..+||..|.+.++++++..++.+++.++.|+
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 2369999999898888777666677777753
No 12
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=7.9e-32 Score=298.08 Aligned_cols=185 Identities=21% Similarity=0.199 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
.|..++.++++++++++|+..++...|.+.+++|++.++.+++.+++.+++++++++.|+++||+|||+++.++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 57788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh----ccc
Q 004673 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL----ASP 159 (738)
Q Consensus 84 ~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~----~~~ 159 (738)
+++++++++|++.++++|++.|++.+...+....++.|++|+++|++++++++.+.++|.++++......... +..
T Consensus 86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 165 (412)
T TIGR02332 86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK 165 (412)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999997665544321 346
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 160 ~Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
|||++|++.++++++..++.++++||+|+
T Consensus 166 gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 166 GWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 99999999998888777677788899984
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=5.3e-31 Score=292.83 Aligned_cols=183 Identities=17% Similarity=0.189 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
++.+.....+++++...+...++..+|.+.+++|++.++.+++.+++.+++++++++.|+++||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 44566677888899899988999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHH
Q 004673 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (738)
Q Consensus 84 ~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~ 163 (738)
+++++++++|++.+++.|++.|++.|..++...+++.|++|+++|++++++.+.+.++|.++++.+.. ...+..+||+
T Consensus 101 ~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~--~l~~~~gw~~ 178 (434)
T PRK11663 101 INILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVG--AIALHYGWRY 178 (434)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999855443 3355679999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCch
Q 004673 164 MLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 164 ~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
.|++.++++++..++..+++||+|+
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHh
Confidence 9999988877666555667788764
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.5e-30 Score=285.82 Aligned_cols=184 Identities=22% Similarity=0.251 Sum_probs=149.6
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhC---CChhHHHHHHH---HHHHHHHHHHHhHHHHHhhhCChHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLN---LGTTVEGLVVA---MSLIGATAITTCSGPISDWLGRRPMLIL 76 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfG---lS~s~iGLi~S---l~~~g~a~~~~~~G~LsDRfGRR~~Lli 76 (738)
+++..+..++++++++++|+..++...|.+.++++ .+..+.+...+ ..+++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45566777789999999999999999999999985 55554444444 4445555999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHH
Q 004673 77 SSVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYC 148 (738)
Q Consensus 77 glvI~aI~s~~~afa~~~~--------~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~ 148 (738)
+.++++++++++++++++. .++++|+++|+|.|..++...+++.|++|+++||++.++.+.+..+|.+++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764 68899999999999999999999999999999999999999998899888865
Q ss_pred HHHHHHH------hccchhHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 149 MVFGMSL------LASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 149 ~~~~l~l------~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
....... ....|||++|++.++++++.+ +....+||+|
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~ 222 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETS 222 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 5433221 125699999998888776643 3344456654
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=3.1e-30 Score=277.58 Aligned_cols=186 Identities=21% Similarity=0.237 Sum_probs=164.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~ 81 (738)
+++|.....++++++.++++...+++..|.+.+++|++..+.+++.+++.+++.++.++.|.++||+|||+++.++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 35678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchh
Q 004673 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (738)
Q Consensus 82 aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~W 161 (738)
++++++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+..........+|
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w 167 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGW 167 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999766554433322359
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 162 RLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 162 r~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
|+.|.+.+++.++. ++....+||+|+
T Consensus 168 ~~~f~~~~~~~~~~-~~~~~~~~~~~~ 193 (405)
T TIGR00891 168 RALFFISILPIIFA-LWLRKNIPEAED 193 (405)
T ss_pred HHHHHHHHHHHHHH-HHHHHhCCCChh
Confidence 99998866555543 344566777754
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=3.6e-30 Score=282.56 Aligned_cols=167 Identities=22% Similarity=0.296 Sum_probs=152.6
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
.++..++.+.++++.++++.....+..|.+.+++|+++.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 45666778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++.++++++++++.++++|++.|++.+..++....++.|++|+++|++++++.+.+.++|.++++.+. ....+..+||
T Consensus 95 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~--~~l~~~~~w~ 172 (426)
T PRK12307 95 VGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFM--PSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHH--HHHcccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999985443 3335667999
Q ss_pred HHHHHHHHH
Q 004673 163 LMLGVLSIP 171 (738)
Q Consensus 163 ~~~~I~ail 171 (738)
++|++.++.
T Consensus 173 ~~f~i~~~~ 181 (426)
T PRK12307 173 AAFFVGLLP 181 (426)
T ss_pred HHHHHHHHH
Confidence 999875443
No 17
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=284.32 Aligned_cols=441 Identities=20% Similarity=0.229 Sum_probs=328.8
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
.+|...+...+++..+.+-....+.+.|.+....+.+.-+..++....+.|..+++..+|.++|++|||+.+.+..+...
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~ 154 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTG 154 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHH
Confidence 45667777888888888888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
+..++.+.++|+..|++.|.+.|+|.|+ .|...++-.|..|..+|+..+-.. +++.+|.++..++..+. ....|||
T Consensus 155 v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~v--m~~~gwr 230 (528)
T KOG0253|consen 155 VFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGV--MSNFGWR 230 (528)
T ss_pred HHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHH--HHhhhHH
Confidence 9999999999999999999999999999 799999999999999999988887 99999999998887766 4455999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccccchhHHHHHHhhhccCCccchhhhhcCCCCCC
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDEL 242 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (738)
|.+...+.+..+ ++...+++||||||+..+++..+|.+.++++.+.|...-
T Consensus 231 ~~l~~~~~pl~~-~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~ql---------------------------- 281 (528)
T KOG0253|consen 231 YLLFTSSTPLMF-AARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQL---------------------------- 281 (528)
T ss_pred HHHHHHHhHHHH-HHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCC----------------------------
Confidence 988888855444 455688999999999999999999999999887764210
Q ss_pred CCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCccccccccccccCCCCCCccccccccc
Q 004673 243 ADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTF 322 (738)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (738)
|-+.
T Consensus 282 ------------------------------------------------------------------plgv---------- 285 (528)
T KOG0253|consen 282 ------------------------------------------------------------------PLGV---------- 285 (528)
T ss_pred ------------------------------------------------------------------Ccce----------
Confidence 0000
Q ss_pred ccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccccccCCCCCCcchhhccccccccCCC
Q 004673 323 GSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSG 402 (738)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (738)
-.+. .++.|.|++-...|+..
T Consensus 286 -----------l~~s--~~~~~e~e~~~~~~~~~---------------------------------------------- 306 (528)
T KOG0253|consen 286 -----------LESS--AIDRQEQEESDLDDSKS---------------------------------------------- 306 (528)
T ss_pred -----------eeee--hhhhhhhhhhchhhhhh----------------------------------------------
Confidence 0000 00011111000000000
Q ss_pred ccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCCCCCCCchhHHHhhhhhccchhhhhh
Q 004673 403 EAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKE 482 (738)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~av~~i~~lyvR~ 482 (738)
T Consensus 307 -------------------------------------------------------------------------------- 306 (528)
T KOG0253|consen 307 -------------------------------------------------------------------------------- 306 (528)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCCCCCccccCCChHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhh---------h
Q 004673 483 LMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVL---------L 553 (738)
Q Consensus 483 ~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~ 553 (738)
+..++.+.....++.++.+++.++.+.+++...++.+.. ...+..+++ .|..-. .
T Consensus 307 --------------~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~-VLlttelfq-sgd~c~~~~r~~p~e~ 370 (528)
T KOG0253|consen 307 --------------SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGS-VLLTTELFQ-SGDACPLYNRFLPTEL 370 (528)
T ss_pred --------------ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHh-ccCccccchhcchhHH
Confidence 001112234567888888888888888888776664443 333333333 232100 0
Q ss_pred hh---cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHH
Q 004673 554 SN---LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTAC 630 (738)
Q Consensus 554 ~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~ 630 (738)
+. -..+. ..-+....+.++..+||.++.++++||+|||+.+..+.+++.++++.+....+.+ ..+..
T Consensus 371 e~~~~c~~s~-~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn---------~~tvl 440 (528)
T KOG0253|consen 371 ETRANCPLSV-AKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN---------AYTVL 440 (528)
T ss_pred HhhhcCCccc-hhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc---------hhHHH
Confidence 00 01111 2235556678899999999999999999999999999999988888877655544 23333
Q ss_pred HHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 004673 631 VIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 710 (738)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 710 (738)
.+..-++..++ ....|+|.+|++|+++|+++.|.|+.+.+||+++.|.+. .+.+. .-..+.+++.++++++.+.+.+
T Consensus 441 lf~arafisg~-fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~-s~sl~i~vy~~~~ilagIavcf 517 (528)
T KOG0253|consen 441 LFTARAFISGA-FQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL-STSLPIFVYGALFILAGIAVCF 517 (528)
T ss_pred HHHHHHHHhch-heEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc-ceeehHHHHHHHHHHHHHHhee
Confidence 44444444444 445669999999999999999999999999999999998 44433 3345677889998888887777
Q ss_pred hccCCCCCCh
Q 004673 711 RVPETKGMPL 720 (738)
Q Consensus 711 ~~~e~~~~~l 720 (738)
+--||||+.+
T Consensus 518 fPiEtkGR~l 527 (528)
T KOG0253|consen 518 FPIETKGRSL 527 (528)
T ss_pred eeeccCCCCC
Confidence 6669999864
No 18
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.6e-29 Score=281.77 Aligned_cols=185 Identities=19% Similarity=0.242 Sum_probs=149.8
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHH-HHHhh--CCChhHHHHHH-----HHHHHHHHHHHHhHHHHHhhhCChHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVY-IKKDL--NLGTTVEGLVV-----AMSLIGATAITTCSGPISDWLGRRPML 74 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~-L~~df--GlS~s~iGLi~-----Sl~~~g~a~~~~~~G~LsDRfGRR~~L 74 (738)
+++.++...+++++++++|...++.+.|. +.+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34567778888999999999999888774 55565 67776 45553 345567789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhh
Q 004673 75 ILSSVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (738)
Q Consensus 75 liglvI~aI~s~~~afa~~~~--------~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~ 146 (738)
+++.++++++++++++++|+. .++++|+++|++.|..++....++.|++|+++||+..+..+.+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 588899999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHH------hccchhHHHHHHHHHHHHHHHHHHhhcccCCchh
Q 004673 147 YCMVFGMSL------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (738)
Q Consensus 147 ~~~~~~l~l------~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~ 189 (738)
..+...... ....+||++|++.++++++.+ +.....||+|+|
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l~~~~~es~~~ 225 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH-HHHHhCCCChhH
Confidence 554443321 134699999998887765532 334456777643
No 19
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.4e-29 Score=274.35 Aligned_cols=182 Identities=18% Similarity=0.159 Sum_probs=157.4
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
++|..++.+.++.++.........+.+|.+.+++|+++.+.+++.+++.+++.+++++.|.++||+|||+++.++.++++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 45655666666666655555555667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++++++++++|++.++++|+++|++.+..++...+++.+++|+++|++++++.+.+.++|.++++.+... ..+..+||
T Consensus 86 ~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~--l~~~~gw~ 163 (390)
T PRK03545 86 ASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRV--IGQYLGWR 163 (390)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHH--HHHHhcHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999655433 34566999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCC
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpES 186 (738)
++|++.++++++..++.++++||.
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999988877665555556654
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.98 E-value=8.6e-30 Score=269.92 Aligned_cols=176 Identities=19% Similarity=0.204 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHH
Q 004673 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (738)
Q Consensus 7 illil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~ 86 (738)
++....+..+..+. ...+++..|.+.+++|++.++.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~ 83 (377)
T TIGR00890 5 VLVGTVIMCFTSGY-VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFT 83 (377)
T ss_pred EeHHHHHHHHHhhH-HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHH
Confidence 33444444444443 55678889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHH
Q 004673 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (738)
Q Consensus 87 ~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~ 166 (738)
++++++|++.++++|++.|++.+..++....++.+++| ++|+++.++...+.++|.+++..... ...+..+||+.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~f~ 160 (377)
T TIGR00890 84 FYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLIT--SVINLEGVPAAFI 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHH--HHHhcccHHHHHH
Confidence 99999999999999999999999988888889999997 56999999999999999877533322 2344569999999
Q ss_pred HHHHHHHHHHHHHhhcccCC
Q 004673 167 VLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 167 I~ail~~~~~~~i~~flpES 186 (738)
+.++++++.+++.+++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (377)
T TIGR00890 161 YMGIIFLLVIVLGAFLIGYP 180 (377)
T ss_pred HHHHHHHHHHHHHHHheecC
Confidence 99998888776666666654
No 21
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.98 E-value=1.1e-29 Score=268.78 Aligned_cols=171 Identities=19% Similarity=0.185 Sum_probs=155.0
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhH
Q 004673 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV 94 (738)
Q Consensus 15 ~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~ 94 (738)
+++...+...++...|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45667788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 004673 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (738)
Q Consensus 95 ~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~ 174 (738)
+.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++.+... ..+..+||+.|++.++++++
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGW--ILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHH--HHHhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999655443 34556899999999988887
Q ss_pred HHHHHhhcccCCc
Q 004673 175 YFAFAVFFLPESP 187 (738)
Q Consensus 175 ~~~~i~~flpESp 187 (738)
..++.+++.||+|
T Consensus 161 ~~~~~~~~~~~~~ 173 (399)
T TIGR00893 161 WGVLWLKFIPDPP 173 (399)
T ss_pred HHHHhhheecCCC
Confidence 7766666777764
No 22
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.98 E-value=1.2e-28 Score=279.23 Aligned_cols=185 Identities=17% Similarity=0.184 Sum_probs=170.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHH
Q 004673 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (738)
Q Consensus 1 ~~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI 80 (738)
|.+.|.+++.++++.++...|.++++..+|.+.+++|.+.++.+|+.+.+.++++++.+++|+++||+|||++++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 1 MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcC-CcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccc
Q 004673 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (738)
Q Consensus 81 ~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~-P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~ 159 (738)
++++++++++++|++.++++|+++|+|.+...+.....+.+.+ |+++|++++++......+|.++|+.+ +....+..
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~l--gg~l~~~~ 158 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLV--GGILLEHF 158 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhccC
Confidence 9999999999999999999999999999999888888887765 77999999999999999999999554 45556778
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 160 SWRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 160 ~Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
+||+.|++...++++.+++.++++|+.|
T Consensus 159 gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 159 YWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999998888887777778888764
No 23
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=5.8e-29 Score=273.44 Aligned_cols=180 Identities=23% Similarity=0.282 Sum_probs=172.7
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
..+..++.+.++.|..+.......+.+|.+.+|+|+|....|++.+.|.+++.+++++...++||+.||++++..+.++.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 45778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++.+++++++||+.++++|++.|+..|.+++...++..+..|+++|++++++...+.+++.++| +.++..+.+..|||
T Consensus 90 ~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~G--vPLGt~ig~~~GWR 167 (394)
T COG2814 90 VSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG--VPLGTFLGQLFGWR 167 (394)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHh--ccHHHHHHHHhhHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 67777778888999
Q ss_pred HHHHHHHHHHHHHHHHHhhccc
Q 004673 163 LMLGVLSIPALLYFAFAVFFLP 184 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flp 184 (738)
+.|++.++++++.++..+..+|
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999988888888
No 24
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=4.3e-30 Score=280.72 Aligned_cols=408 Identities=17% Similarity=0.192 Sum_probs=312.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
+++-+.+.+++|+...+..+..++.+.|.+.++.++|.++.|++.+++.+.|+++-++.|.++||.++|..+.+++++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
+.++++++++++..+.++.+++|+.+|..+|++...++.|+|+++||+..++.++.-++|..+.+.+........+.+||
T Consensus 106 i~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~ 185 (448)
T COG2271 106 IVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWR 185 (448)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999987766445556666999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccccchhHHHHHHhhhccCCccchhhhhcCCCCCC
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDEL 242 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (738)
..|++.++++++..++.++..+|+|+-.-.. ++|+|.
T Consensus 186 ~~f~~pgiiaiival~~~~~~rd~Pqs~GLP------------------------------------~ie~~~------- 222 (448)
T COG2271 186 AAFYFPGIIAIIVALILLFLLRDRPQSEGLP------------------------------------PIEEYR------- 222 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccCCC------------------------------------CHHHhh-------
Confidence 9999999999999888899999998521100 000000
Q ss_pred CCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCccccccccccccCCCCCCccccccccc
Q 004673 243 ADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTF 322 (738)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (738)
.||..
T Consensus 223 ---------------------------------------------------~d~~e------------------------ 227 (448)
T COG2271 223 ---------------------------------------------------GDPLE------------------------ 227 (448)
T ss_pred ---------------------------------------------------cCchh------------------------
Confidence 00000
Q ss_pred ccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccccccCCCCCCcchhhccccccccCCC
Q 004673 323 GSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSG 402 (738)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (738)
T Consensus 228 -------------------------------------------------------------------------------- 227 (448)
T COG2271 228 -------------------------------------------------------------------------------- 227 (448)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCCCCCCCchhHHHhhhhhccchhhhhh
Q 004673 403 EAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKE 482 (738)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~av~~i~~lyvR~ 482 (738)
T Consensus 228 -------------------------------------------------------------------------------- 227 (448)
T COG2271 228 -------------------------------------------------------------------------------- 227 (448)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCCCCCccccCCChHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchh
Q 004673 483 LMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSES 562 (738)
Q Consensus 483 ~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~ 562 (738)
..++.++.+....|+.+++.-.+.+.++.+++........-++++-|.|.++.+ ..|+|...
T Consensus 228 ----------~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e--------~k~~s~~~ 289 (448)
T COG2271 228 ----------IYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSE--------VKGFSLVK 289 (448)
T ss_pred ----------hhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--------hcCCCHHH
Confidence 000000000023445555565666777777777776666778899999999888 46788777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcc--chhHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhh
Q 004673 563 ASFLISAFTTFLMLPCIGVAMKLMDVA--GRRKLLLTTI-PVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFV 639 (738)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~l~d~~--grr~~l~~~~-~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 639 (738)
+...++. .-.++++|.+++|+++||+ |||....+.. .+..++++.+.... ..+..+..+++++ ..++.
T Consensus 290 a~~a~~l-fE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~-------~~~~~l~~~~l~~-iGf~I 360 (448)
T COG2271 290 ANWAISL-FEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAP-------NGSYLLDAILLFI-IGFLI 360 (448)
T ss_pred HHHHHHH-HHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCC-------CccHHHHHHHHHH-HHHHH
Confidence 7777755 5799999999999999986 6776554432 22222222222211 1122222222222 22222
Q ss_pred hhcCcchhhhhcccCcccchhhhhHHHHHhhhH-HHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 640 AAYGPIPNILCAEIFPTKVRGICIAICAMAYWI-CDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 640 ~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i-~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
.+...+....+.|..|.+.-|++.|+...+..+ |+..+....+.+.+..||.+.|.++.+.++++.+++.......
T Consensus 361 yGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~~ 437 (448)
T COG2271 361 YGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNAE 437 (448)
T ss_pred hhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhhc
Confidence 233334557778999999999999999999988 9999999999999999999999988888888877776655433
No 25
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=3.4e-31 Score=290.60 Aligned_cols=444 Identities=20% Similarity=0.227 Sum_probs=322.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhh-C-------CChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDL-N-------LGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPM 73 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~df-G-------lS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~ 73 (738)
|+....+.+..+|.|.+.||..+++.+.|.+..-+ + ++....+.+..+.++|.++|++++|++.||+|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 56778888999999999999999999998877654 2 556788899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhh
Q 004673 74 LILSSVLYFVSGLVMLWSP-------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (738)
Q Consensus 74 LliglvI~aI~s~~~afa~-------~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~ 146 (738)
+...++++.+++++++++. -..+|.+.|++.|+|.|+.+|...+..+|....++||...+.+.+...+|...|
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999888742 247888899999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhcc-------------chhHHHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccccch
Q 004673 147 YCMVFGMSLLAS-------------PSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVS 213 (738)
Q Consensus 147 ~~~~~~l~l~~~-------------~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~~~~ 213 (738)
.++......... .-||..|.+.++++++++ .....+|||+||-....++.+. ..++..
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l-y~Rl~M~Et~~Y~al~~~~~~~--a~~d~~------ 267 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL-YFRLKMPETARYTALVSKKLKQ--AAGDMK------ 267 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhhcCCcchhHHHHhhcCHhh--hhhccc------
Confidence 777666543211 149999999999888766 4477899998874211111100 000000
Q ss_pred hHHHHHHhhhccCCccchhhhhcCCCCCCCCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCccc
Q 004673 214 GEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPL 293 (738)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (738)
T Consensus 268 -------------------------------------------------------------------------------- 267 (538)
T KOG0252|consen 268 -------------------------------------------------------------------------------- 267 (538)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccccCCCCCCcccccccccccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccc
Q 004673 294 MDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTT 373 (738)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (738)
++++ .+-+ +|. .+ .++.+
T Consensus 268 ------------k~~~----------------------------~~~~---~~~--~~--------~~~~~--------- 285 (538)
T KOG0252|consen 268 ------------KVLS----------------------------VDIE---AES--TA--------ESDVP--------- 285 (538)
T ss_pred ------------cccc----------------------------cccc---hhh--cc--------ccCCC---------
Confidence 0000 0000 000 00 00000
Q ss_pred cccccccCCCCCCcchhhccccccccCCCccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCccc
Q 004673 374 SMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLV 453 (738)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (738)
T Consensus 286 -------------------------------------------------------------------------------- 285 (538)
T KOG0252|consen 286 -------------------------------------------------------------------------------- 285 (538)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCchhHHHhhhhhccchhhhhhcccCCCCCCCCCCCCccccCCChHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 004673 454 SVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGI 533 (738)
Q Consensus 454 ~~~~~~~~~~~~~~~a~av~~i~~lyvR~~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 533 (738)
..+.....+..++..+.-+. +++.....+..-..+
T Consensus 286 --------------------------------------------~~~~~~~~F~~~f~~~hg~~-Llgt~~~WFllDiaf 320 (538)
T KOG0252|consen 286 --------------------------------------------PPSNSFGLFSRLFLRWHGKH-LLGTAGTWFLLDIAF 320 (538)
T ss_pred --------------------------------------------CcccccchHHHHHHHHHHHH-HHHHHHHHHhhhhhh
Confidence 00001112333333333344 444444445455557
Q ss_pred hhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHH
Q 004673 534 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 613 (738)
Q Consensus 534 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~ 613 (738)
+....+...++++.|+.....++ ...-..+....++...+.+||..+..+++|++|||+..+.+++++++..+.+.+.+
T Consensus 321 y~~nL~~s~I~~~ig~~~~~~~~-~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y 399 (538)
T KOG0252|consen 321 YGQNLFQSVIFSAIGVIPSANTY-HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPY 399 (538)
T ss_pred hccccHHHHHHHhhccCCCcchH-HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCc
Confidence 77899999999987764311111 00001334444555667778888999999999999999999999999888887754
Q ss_pred HhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHH-----hh
Q 004673 614 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS-----SI 688 (738)
Q Consensus 614 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~-----~~ 688 (738)
... ......+++..+.+++..++.+....++.+|+||+++|+++.||+.+++-+|++++...+..+.+ .+
T Consensus 400 ~~~-----~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~ 474 (538)
T KOG0252|consen 400 NQL-----ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNI 474 (538)
T ss_pred ccc-----cccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccc
Confidence 421 12223344555555666677777888999999999999999999999999999999999999999 78
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhccCCCCCChhhhHHhhh
Q 004673 689 GLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFA 728 (738)
Q Consensus 689 g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~ 728 (738)
|.++.|+++++++++..++.++ +||||++++|++++..+
T Consensus 475 g~~~v~~i~~~~~~~gi~~T~l-~pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 475 GVRNVFIILAGCMLLGILFTLL-IPETKGKSLEEISNEEE 513 (538)
T ss_pred cchHHHHHHHHHHHHhHheeEE-eecccccCHHHhcChhh
Confidence 9999999999999988776655 78999999999976554
No 26
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=1e-28 Score=275.98 Aligned_cols=183 Identities=17% Similarity=0.158 Sum_probs=155.0
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
+.|.++..+++.....+.++..++...|++.++ |++..+.+++.+++.++++++++++|+++||+|||+++.++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 345566666777788888888888888999988 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh----hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHh-hHHHHHHHHHhc
Q 004673 83 VSGLVMLWSP----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL-AYCMVFGMSLLA 157 (738)
Q Consensus 83 I~s~~~afa~----~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I-~~~~~~~l~l~~ 157 (738)
++.+++++++ +++.+++.|++.|++.+..++.....+.+++|+++|++++++.+.+..+|..+ +++...... .
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~--~ 182 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA--W 182 (452)
T ss_pred HHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--H
Confidence 9999888763 78889999999999999998888889999999999999999999999888644 433222221 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 158 SPSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 158 ~~~Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
..+||+.|++.++++++..++.++++||+|+
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 2499999999998888877777788888864
No 27
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=5.9e-29 Score=272.62 Aligned_cols=169 Identities=17% Similarity=0.097 Sum_probs=143.0
Q ss_pred HHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 004673 18 QGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVL 97 (738)
Q Consensus 18 ~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~l 97 (738)
+......+++.+|.+.+++|+|+.+.|++.+++.+++++++++.|+++||+|||+++..+......+.+.....+|++.+
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34556778899999999999999999999999999999999999999999999998776665555554433334799999
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 004673 98 CIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 98 iI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~ 177 (738)
+++|+++|+|.+.. +.....++|++|+++|++++++.+.+.++|.++++.+.... .+..+||++|++.++++++..+
T Consensus 83 ~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l--~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 83 LACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI--YTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHccchHHHHHHHHHHHHHHHH
Confidence 99999999999964 56667779999999999999999999999999996555444 4567999999999999888777
Q ss_pred HHhhcccCCchh
Q 004673 178 FAVFFLPESPRW 189 (738)
Q Consensus 178 ~i~~flpESp~~ 189 (738)
+.++++||+|++
T Consensus 160 ~~~~~lp~~p~~ 171 (368)
T TIGR00903 160 LVLAALPALPFQ 171 (368)
T ss_pred HHHHHcCCCCCC
Confidence 778889998753
No 28
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=1.2e-28 Score=273.81 Aligned_cols=167 Identities=20% Similarity=0.272 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHH-HHHHHH-----HHHHHHHhHHHHHhhhCChHHHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLV-VAMSLI-----GATAITTCSGPISDWLGRRPMLILS 77 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi-~Sl~~~-----g~a~~~~~~G~LsDRfGRR~~Llig 77 (738)
++.....++++++++++|+..++...|.+.++++.++.+.+.+ .+...+ +..+++++.|+++||+|||++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4567888999999999999999999999999999988776543 333322 2246889999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHH
Q 004673 78 SVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (738)
Q Consensus 78 lvI~aI~s~~~afa~~~~--------~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~ 149 (738)
.+++++++++++++++++ .++++|+++|++.+...+....++.|++|+++|++++++...+.++|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987 468899999999999999899999999999999999999998888888877655
Q ss_pred HHHHHH------hccchhHHHHHHHHH
Q 004673 150 VFGMSL------LASPSWRLMLGVLSI 170 (738)
Q Consensus 150 ~~~l~l------~~~~~Wr~~~~I~ai 170 (738)
+..... ....|||++|++..+
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 544321 245799999987543
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=2.4e-28 Score=273.59 Aligned_cols=183 Identities=22% Similarity=0.288 Sum_probs=160.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
+.+..+..++++.+++.++...+++.+|.+.+++|+++.+.+++.+++.+++.++.++.|+++||+|||++++++.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34567778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++.+++++++|++.++++|++.|++.+..++....++.|++|+++|++++++...+.++|.++++.+.. ...+..+||
T Consensus 97 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~--~l~~~~~w~ 174 (496)
T PRK03893 97 VGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYS--LVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999965554 345677999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
+.|++.++..++ .++.....||+++
T Consensus 175 ~~f~~~~~~~~~-~~~~~~~~p~~~~ 199 (496)
T PRK03893 175 ALFFIGILPIIF-ALWLRKNLPEAED 199 (496)
T ss_pred HHHHHHHHHHHH-HHHHHHhCCCchh
Confidence 999875444333 3333445566543
No 30
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=1.3e-28 Score=263.42 Aligned_cols=186 Identities=27% Similarity=0.342 Sum_probs=165.9
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
+.+..+..+.+..+..+++....+...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFS 93 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHH
Confidence 34556667777888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+. ....+..+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~g~~ 171 (398)
T TIGR00895 94 VFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA--GWLIPVFGWR 171 (398)
T ss_pred HHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH--HHHhhcccce
Confidence 99999999999999999999999999999999999999999999999999999999999999996554 3345567999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCchhh
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPESPRWL 190 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpESp~~~ 190 (738)
+.|++.++++++..++.++++||+|++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFL 199 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHH
Confidence 9999988777776667777889987654
No 31
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=1.1e-28 Score=270.80 Aligned_cols=167 Identities=16% Similarity=0.235 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH
Q 004673 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (738)
Q Consensus 5 ~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~ 84 (738)
|.....++++.++.... ..+++++|.+++++|+|.++.+++.+++.+++.+++++.|+++||+|||+++..+..+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~ 87 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG 87 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH
Confidence 44444555555554443 66788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhcc-chhHH
Q 004673 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSWRL 163 (738)
Q Consensus 85 s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~-~~Wr~ 163 (738)
.+++++++|++.++++|+++|+|.+...+....++.+++| ++|++++++...+..+|..+++.+.... .++ .+||+
T Consensus 88 ~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l--~~~~~~w~~ 164 (393)
T PRK09705 88 ALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWL--VQHSETWYQ 164 (393)
T ss_pred HHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCHHH
Confidence 9999999999999999999999999999999999999997 7799999999999999998886655433 333 38999
Q ss_pred HHHHHHHHHHHH
Q 004673 164 MLGVLSIPALLY 175 (738)
Q Consensus 164 ~~~I~ail~~~~ 175 (738)
.+.+.++..++.
T Consensus 165 ~~~~~~~~~~~~ 176 (393)
T PRK09705 165 TLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHHHHH
Confidence 988776665443
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=2.1e-27 Score=259.02 Aligned_cols=177 Identities=16% Similarity=0.226 Sum_probs=157.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
+..+.++.++.+.......+.+|.+.+++|++.++.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 34556677777888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHH
Q 004673 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (738)
Q Consensus 88 ~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I 167 (738)
+++++|++.+++.|++.|++.+...+....++.+++|+++|++++++...+..+|..+++.+. ....+..+||+.|.+
T Consensus 85 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~--~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLG--TYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHH--HHHhhhccHHHHHHH
Confidence 999999999999999999999998888889999999999999999999999999999885443 344556799999999
Q ss_pred HHHHHHHHHHHHhhcccCC
Q 004673 168 LSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 168 ~ail~~~~~~~i~~flpES 186 (738)
.++++++.++..++++||.
T Consensus 163 ~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 9988877666556667765
No 33
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=1.5e-28 Score=260.73 Aligned_cols=173 Identities=20% Similarity=0.224 Sum_probs=156.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 004673 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP 92 (738)
Q Consensus 13 L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~ 92 (738)
+++++...++..++...|.+.+++|++..+.+++.+++.+++.++.++.|+++||+|||+++.++.++.+++.+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHH-HHHHHHHhccchhHHHHHHHHHH
Q 004673 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYC-MVFGMSLLASPSWRLMLGVLSIP 171 (738)
Q Consensus 93 ~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~-~~~~l~l~~~~~Wr~~~~I~ail 171 (738)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++. ... ......+||+.|++.+++
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 159 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLF--GIAELYSWHWVFIVPGII 159 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHH--HHHhcCCchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999862 322 234456999999999988
Q ss_pred HHHHHHHHhhcccCCc
Q 004673 172 ALLYFAFAVFFLPESP 187 (738)
Q Consensus 172 ~~~~~~~i~~flpESp 187 (738)
+++..++.+++.||+|
T Consensus 160 ~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 160 AIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHheeeCCCc
Confidence 8777667677777765
No 34
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=1.1e-27 Score=266.41 Aligned_cols=183 Identities=16% Similarity=0.126 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
++..+..+.++++..+.++..+....|.+.+ +|+++++.+++.+++.++..++.++.|+++||+|||+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3555666777788888888877778888876 699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh----hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccc
Q 004673 84 SGLVMLWS----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (738)
Q Consensus 84 ~s~~~afa----~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~ 159 (738)
+.+++++. .+++.+.+.|++.|++.+..++....++.|++|+++||+++++.+.+.++|..+++.+.... .....
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~ 182 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG-MAWFN 182 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH-HHHhh
Confidence 99887764 56788889999999999999898899999999999999999999999999988875443322 22335
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 160 ~Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
+||..|++.++++++..++.++++||+|+
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 89999999999888877676777888754
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=1.1e-27 Score=266.33 Aligned_cols=178 Identities=21% Similarity=0.312 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHH
Q 004673 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (738)
Q Consensus 7 illil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~ 86 (738)
++..++++.++..++....++.+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||+++.++.++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHH
Q 004673 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (738)
Q Consensus 87 ~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~ 166 (738)
++++++|++.++++|+++|++.+...+...+++.|++|+++|+++.++...+..+|..+++.+. ....+..+||+.|+
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLG--GWIIENYHWRWIFL 160 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccH--hHhccCcCceehhh
Confidence 9999999999999999999999999999999999999999999999999999999999995544 44566789999999
Q ss_pred HHHHHHHHHHHHHhhcccCC
Q 004673 167 VLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 167 I~ail~~~~~~~i~~flpES 186 (738)
+.++++++.+++.+++.||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCc
Confidence 99888887776666777765
No 36
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.2e-26 Score=252.82 Aligned_cols=167 Identities=19% Similarity=0.208 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHH-HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH
Q 004673 6 LVAIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (738)
Q Consensus 6 lillil~L~~~~~g~~~~~~~~~lp~-L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~ 84 (738)
.-+..+.+..++...+.....+.+|. +.+++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++.++.++++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 34455677777888888888888886 67899999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhh--------hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh
Q 004673 85 GLVMLWS--------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL 156 (738)
Q Consensus 85 s~~~afa--------~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~ 156 (738)
.+++.++ .+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++..+ ....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~--~~l~ 172 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLG--VLLY 172 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH--HHHH
Confidence 7766553 25778999999999999999999999999999999999999999999999999885544 3445
Q ss_pred ccchhHHHHHHHHHHHHH
Q 004673 157 ASPSWRLMLGVLSIPALL 174 (738)
Q Consensus 157 ~~~~Wr~~~~I~ail~~~ 174 (738)
...+||+++++.++++++
T Consensus 173 ~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 173 HWGGLAGLGLLIMLLALL 190 (399)
T ss_pred HcccHHHHHHHHHHHHHH
Confidence 567999998877666544
No 37
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=4e-27 Score=257.84 Aligned_cols=175 Identities=13% Similarity=0.096 Sum_probs=154.7
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
+++.+.+.++++.++.+.....++..+|.+.+++|+|.++.+++.+.+.+++.++.++.|+++||+|||+++.++.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35566677788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++.++++++++++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+.... .....+||
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-~~~~~gw~ 162 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL-LARSIEWY 162 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccccHH
Confidence 99999999999999999999999999999898999999999999999999998888888888875443322 23456999
Q ss_pred HHHHHHHHHHHHHHHH
Q 004673 163 LMLGVLSIPALLYFAF 178 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~ 178 (738)
+.|.+.++++++.+++
T Consensus 163 ~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 163 WVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999988877765443
No 38
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=1e-27 Score=267.70 Aligned_cols=185 Identities=16% Similarity=0.217 Sum_probs=164.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH----------------------hhCCChhHHHHHHHHHHHHHHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKK----------------------DLNLGTTVEGLVVAMSLIGATAITT 59 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~----------------------dfGlS~s~iGLi~Sl~~~g~a~~~~ 59 (738)
+.+|.++..+++++.+.+.++..++...+.+.+ +++++..+.|++.+++.+++.++++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~ 94 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQI 94 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHc
Confidence 356788888899999999999999998888876 8999999999999999999999999
Q ss_pred hHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHH
Q 004673 60 CSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF 137 (738)
Q Consensus 60 ~~G~LsDRfGRR~~LliglvI~aI~s~~~afa--~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~ 137 (738)
+.|+++||+|||+++.++.++.+++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...
T Consensus 95 ~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 174 (465)
T TIGR00894 95 PVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTS 174 (465)
T ss_pred chHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999887654 5688899999999999999999999999999999999999999999
Q ss_pred HhhhhhHhhHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 138 TGSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 138 ~~~~G~~I~~~~~~~l~l~~~-~~Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
+..+|.++++.+... ..+. .+||++|++.++++++..++.+++.+|+|+
T Consensus 175 ~~~~g~~i~~~l~~~--l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 175 GFQLGTFIFLPISGW--LCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHHHHHH--HHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 999999999666543 3455 499999999999888877666667777764
No 39
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=4e-26 Score=250.03 Aligned_cols=183 Identities=20% Similarity=0.265 Sum_probs=161.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~ 81 (738)
++.++.++.+.++.++..+....+.+.+|.+.++++.+..+.++..+++.+++.++.++.|.++||+|||+++.++.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 35677788888899988888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchh
Q 004673 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (738)
Q Consensus 82 aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~W 161 (738)
+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+++.+.. ...+..+|
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~--~l~~~~~w 166 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGA--ALIHVLPW 166 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHccCc
Confidence 9999999999999999999999999999988889999999999999999999988888888888855543 33455699
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 162 RLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 162 r~~~~I~ail~~~~~~~i~~flpES 186 (738)
|+.|++.++++++.++..++..||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPET 191 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999888877666555666765
No 40
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=3.2e-26 Score=258.55 Aligned_cols=181 Identities=17% Similarity=0.115 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH
Q 004673 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (738)
Q Consensus 5 ~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~ 84 (738)
+..+....+..++..++...+.+..|.+.+++|++.++.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 44455555666667777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHH--Hh-----c
Q 004673 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS--LL-----A 157 (738)
Q Consensus 85 s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~--l~-----~ 157 (738)
.++++++++++.++++|++.|++.+... ....++.|++|+++||+++++......+|..++..+..... .. .
T Consensus 115 ~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 193 (476)
T PLN00028 115 VFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPS 193 (476)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999988654 45678999999999999999998877777777654442221 11 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 158 SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 158 ~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
..+||++|++.++++++..++.+++.++.
T Consensus 194 ~~gWr~~f~i~g~l~l~~~l~~~~~~~~~ 222 (476)
T PLN00028 194 FTAWRIAFFVPGLLHIIMGILVLTLGQDL 222 (476)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 24899999999998887665555544444
No 41
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=1e-26 Score=255.94 Aligned_cols=387 Identities=14% Similarity=0.071 Sum_probs=276.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-
Q 004673 12 TIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW- 90 (738)
Q Consensus 12 ~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af- 90 (738)
..+.++.........+.+|.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 23 FIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH
Confidence 3445566666677788889999999999999999999999999999999999999999999999988888877665542
Q ss_pred ----hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHH
Q 004673 91 ----SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (738)
Q Consensus 91 ----a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~ 166 (738)
.++++.+++.|++.|++.+...+...+++.+++|+++|++++++.+...++|.++|+.+... ..+..+|++.|+
T Consensus 103 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~--l~~~~~~~~~~~ 180 (417)
T PRK10489 103 AFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGL--LIAAGGVAWNYG 180 (417)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHH--HHHHHhhHHHHH
Confidence 56889999999999999998889999999999999999999999999999999999655433 344458999998
Q ss_pred HHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccccchhHHHHHHhhhccCCccchhhhhcCCCCCCCCCC
Q 004673 167 VLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDELADGE 246 (738)
Q Consensus 167 I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (738)
+.++..++..+ ..+.+|++++. + ++ .+... .
T Consensus 181 ~~~~~~~~~~~-~~~~l~~~~~~-----~-~~----------~~~~~---~----------------------------- 211 (417)
T PRK10489 181 LAAAGTFITLL-PLLRLPALPPP-----P-QP----------REHPL---R----------------------------- 211 (417)
T ss_pred HHHHHHHHHHH-HHHhCCCCCCC-----C-cc----------cccch---H-----------------------------
Confidence 87776665443 34555654210 0 00 00000 0
Q ss_pred CCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCccccccccccccCCCCCCccccccccccccc
Q 004673 247 EPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMF 326 (738)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (738)
+
T Consensus 212 -------~------------------------------------------------------------------------ 212 (417)
T PRK10489 212 -------S------------------------------------------------------------------------ 212 (417)
T ss_pred -------H------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccccccCCCCCCcchhhccccccccCCCcccc
Q 004673 327 STAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVG 406 (738)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (738)
T Consensus 213 -------------------------------------------------------------------------------- 212 (417)
T PRK10489 213 -------------------------------------------------------------------------------- 212 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCCCCCCCchhHHHhhhhhccchhhhhhcccC
Q 004673 407 STGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQ 486 (738)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~av~~i~~lyvR~~v~E 486 (738)
T Consensus 213 -------------------------------------------------------------------------------- 212 (417)
T PRK10489 213 -------------------------------------------------------------------------------- 212 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCccccCCChHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHH
Q 004673 487 HPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFL 566 (738)
Q Consensus 487 sp~f~~~~~~~e~~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 566 (738)
....++.+++++..+..++...+. .. ...+..+.|.++++ .+|.++...+.+
T Consensus 213 ---------------~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~p~~~~~--------~~g~~~~~~g~~ 264 (417)
T PRK10489 213 ---------------LLAGFRFLLASPVVGGIALLGGLL---TM--ASAVRVLYPALADE--------VWQMGAAQIGLL 264 (417)
T ss_pred ---------------HHHHHHHHHcChHHHHHHHHHHHH---HH--HHhHHHhhHHHHHh--------ccCCChhHhHHH
Confidence 000011122221112222211111 11 23345667777766 245555555554
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcch
Q 004673 567 ISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIP 646 (738)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (738)
. ....++.+++.++.+++.||.++++.+..+..+.+++++++..... ......+.++++.+. ....+..
T Consensus 265 ~-~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~-~~~~~~~ 333 (417)
T PRK10489 265 Y-AAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM---------WILAVLCLALFGYLS-AISSLLQ 333 (417)
T ss_pred H-HHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccch---------HHHHHHHHHHHHHHH-HHHHHHH
Confidence 4 4567889999999999999988887877777666666555433211 112222222222222 2223445
Q ss_pred hhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCCCChhhhHHh
Q 004673 647 NILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEF 726 (738)
Q Consensus 647 ~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~ 726 (738)
..++.|.+|++.||++.|++++..++|..+++.+.|.+.+..|+..++++++++.++..++++..+|++|+.++|++++.
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 57889999999999999999999999999999999999999999888988888888888888888999999999988765
Q ss_pred h
Q 004673 727 F 727 (738)
Q Consensus 727 ~ 727 (738)
.
T Consensus 414 ~ 414 (417)
T PRK10489 414 A 414 (417)
T ss_pred C
Confidence 3
No 42
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=6.4e-26 Score=249.62 Aligned_cols=183 Identities=15% Similarity=0.092 Sum_probs=157.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~ 81 (738)
++.|..+..+.++.++.........+.+|.+.+++|+++++.++..+++.++..+++++.|.++||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 34566666666666666666556666789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchh
Q 004673 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (738)
Q Consensus 82 aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~W 161 (738)
+++.+++++++|++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.++++.+. ....+..+|
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~--~~l~~~~gw 173 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLG--SFLGELIGW 173 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhcCH
Confidence 999999999999999999999999999999999999999999999999999999999999999995554 444566799
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 162 RLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 162 r~~~~I~ail~~~~~~~i~~flpES 186 (738)
|+.|++.++++++..++.....||+
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999998887766554444445554
No 43
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=5.9e-26 Score=243.60 Aligned_cols=175 Identities=23% Similarity=0.317 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a 89 (738)
.+.+..++...+...+.+.+|.+.+++|.++++.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 88 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLA 88 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 33334456677788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~a 169 (738)
++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+.. ...+..+||++|++.+
T Consensus 89 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~--~l~~~~~~~~~~~~~~ 166 (385)
T TIGR00710 89 LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGG--YILVWLSWHAIFAFLS 166 (385)
T ss_pred HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999865544 3345569999999998
Q ss_pred HHHHHHHHHHhhcccCC
Q 004673 170 IPALLYFAFAVFFLPES 186 (738)
Q Consensus 170 il~~~~~~~i~~flpES 186 (738)
+++++..++.+++.||+
T Consensus 167 ~~~~~~~~~~~~~~~~~ 183 (385)
T TIGR00710 167 LAGILLSALIFFILPET 183 (385)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 88877666656666665
No 44
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=9.2e-26 Score=251.84 Aligned_cols=178 Identities=19% Similarity=0.272 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHH
Q 004673 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (738)
Q Consensus 7 illil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~ 86 (738)
.++.++++.++..++...+++.+|.+.+++|.+..+.+++.+.+.++.+++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 45667788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHH
Q 004673 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (738)
Q Consensus 87 ~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~ 166 (738)
++.++++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|.++++.+. ....+..+||++|.
T Consensus 91 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~--g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALG--GLLVEYASWHWIFL 168 (471)
T ss_pred HHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHH--HHHHhhccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999985554 44455679999999
Q ss_pred HHHHHHHHHHHHHhhcccCC
Q 004673 167 VLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 167 I~ail~~~~~~~i~~flpES 186 (738)
+..+++++..++.....|+.
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCc
Confidence 98887777666655555554
No 45
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=3.6e-26 Score=248.89 Aligned_cols=165 Identities=16% Similarity=0.194 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHH-HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHH
Q 004673 7 VAIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (738)
Q Consensus 7 illil~L~~~~~g~~~~~~~~~lp~-L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s 85 (738)
.+..+.++.++.........+.+|. +.+++|+|..+.|++.+++.+++.+++++.|+++||+|||++++++.++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3444556667777777777788885 678999999999999999999999999999999999999999999988877765
Q ss_pred HHHHh--------hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhc
Q 004673 86 LVMLW--------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA 157 (738)
Q Consensus 86 ~~~af--------a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~ 157 (738)
+.+.. ..|++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+.++|.++++... .....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~--~~l~~ 173 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG--LLLHS 173 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHH--HHHHh
Confidence 54322 368899999999999999999899999999999999999999999999999999985554 33345
Q ss_pred cchhHHHHHHHHHHHH
Q 004673 158 SPSWRLMLGVLSIPAL 173 (738)
Q Consensus 158 ~~~Wr~~~~I~ail~~ 173 (738)
..+||..+.+..++.+
T Consensus 174 ~~g~~~~~~~~~~~~~ 189 (392)
T PRK12382 174 HFGFAALALTTMVLPL 189 (392)
T ss_pred ccChHHHHHHHHHHHH
Confidence 6699988776555443
No 46
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=4.9e-26 Score=243.76 Aligned_cols=174 Identities=19% Similarity=0.208 Sum_probs=144.5
Q ss_pred HHHHHHHHHhHHHHHHHHHH-HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHH-HHHHHHHHHHHHHH
Q 004673 12 TIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSGLVML 89 (738)
Q Consensus 12 ~L~~~~~g~~~~~~~~~lp~-L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~Ll-iglvI~aI~s~~~a 89 (738)
.+.+++.+.......+.+|. +.+++|.|..+.|++.+++.++..+.+++.|+++||+||||.++ .+.++.+++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 34577778888888888885 67889999999999999999999999999999999999988655 56677778888899
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhh--chHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRL--NTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~--~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I 167 (738)
+++|++.+++.|++.|.+.+...|...+++.|+.|+++|+++ .++...+.++|.++++.+. ....+..+||+.|++
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~--~~l~~~~~~~~~f~~ 160 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLA--FWLALGFGFTVMFLT 160 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHH--HHHHHhcccHHHHHH
Confidence 999999999999999988888888888899999888777654 6777888889999985544 334556799999999
Q ss_pred HHHHHHHHHHHHhhcccCCc
Q 004673 168 LSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 168 ~ail~~~~~~~i~~flpESp 187 (738)
.++++++..++.++++||.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 161 AALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHHHHhCCCcc
Confidence 99888777766667788765
No 47
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1.3e-26 Score=263.19 Aligned_cols=170 Identities=30% Similarity=0.521 Sum_probs=148.2
Q ss_pred HhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 004673 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVT 113 (738)
Q Consensus 34 ~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~ 113 (738)
+.+..+.....+..+++++|.++|++++|.++||+|||++++++.++.+++.++.++++|++.+++.|++.|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 45667788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCCchhhhcc
Q 004673 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSK 193 (738)
Q Consensus 114 ~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~ 193 (738)
....++.|++++++|+.+.++....+..|.++.+...+.. . +||+.+++..+++++.+++ +++.||+|||+..+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~---~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYIT---R--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred HhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHH---h--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 9999999999999999999995555555554432222222 2 9999999999999886655 67777999999999
Q ss_pred CcchHHHHHHHHhhcc
Q 004673 194 GKMLEAKQVLQRLRGR 209 (738)
Q Consensus 194 ~~~~~a~~~~~~~~~~ 209 (738)
++.+++.+.+++....
T Consensus 265 g~~~~a~~~l~~~a~~ 280 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKL 280 (521)
T ss_pred CchHHHHHHHHHHHhh
Confidence 9999999988887544
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=9.4e-26 Score=238.47 Aligned_cols=166 Identities=11% Similarity=0.067 Sum_probs=148.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af 90 (738)
+.++.++.........+.+|.+..+++.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.++..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 45667777778888888899999999999999999999999999999999999999999999999999999999999888
Q ss_pred hh-----hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHH
Q 004673 91 SP-----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (738)
Q Consensus 91 a~-----~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~ 165 (738)
+. +++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+... ..+..+||+.|
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~--l~~~~g~~~~~ 161 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGL--MYATLGIKWAI 161 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH--HHHHhhHHHHH
Confidence 87 999999999999999999999999999999999999999999999999999999655443 34556999999
Q ss_pred HHHHHHHHHHHHH
Q 004673 166 GVLSIPALLYFAF 178 (738)
Q Consensus 166 ~I~ail~~~~~~~ 178 (738)
++.++..++..++
T Consensus 162 ~~~~~~~~~~~~~ 174 (365)
T TIGR00900 162 WVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHH
Confidence 8887766654433
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=3.3e-25 Score=241.33 Aligned_cols=152 Identities=17% Similarity=0.116 Sum_probs=139.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHH
Q 004673 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (738)
Q Consensus 1 ~~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI 80 (738)
|++.-..+..+.++.++...+...+++.+|.+.+++|.|..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~ 80 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLI 80 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 44544556777889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHH
Q 004673 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (738)
Q Consensus 81 ~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~ 152 (738)
.+++.+++++++|++.++++|+++|++.+...+...+.+.+..++++|++++++...+.++|..+|+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 81 FAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999988888888899999999999999999999999999655443
No 50
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=9.7e-26 Score=235.75 Aligned_cols=167 Identities=27% Similarity=0.403 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a 89 (738)
.+.++.+....+.....+..|.+.++++.+..+.+++.++..++..++.++.|+++||+|||+++.++.++.+++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 45667778888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~a 169 (738)
++++++.++++|++.|++.+...+...+++.|++|+++|++++++.+...++|..+++...... .+..+||+.+.+.+
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL--AESLGWRWLFLILA 160 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999996555443 45558999999988
Q ss_pred HHHHHHHHH
Q 004673 170 IPALLYFAF 178 (738)
Q Consensus 170 il~~~~~~~ 178 (738)
++.++..++
T Consensus 161 ~~~~~~~~~ 169 (352)
T cd06174 161 ILGLLLALL 169 (352)
T ss_pred HHHHHHHHH
Confidence 887765544
No 51
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=3.6e-26 Score=256.56 Aligned_cols=179 Identities=15% Similarity=0.079 Sum_probs=150.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
+.|.++..++++..........++...|.+.+++|++.++.+++.+.+.++..++.++.|+++||+|||++++++.++.+
T Consensus 16 ~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 16 WGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred cchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 34667777777766555555667888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHH-HHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchh
Q 004673 83 VSGLVMLWSPNVYVLCI-ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (738)
Q Consensus 83 I~s~~~afa~~~~~liI-~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~W 161 (738)
+++++++++++++.+++ .|++.|++.+...+...+++.++++ ++|+++.++.+.+..+|..+++.+ .....+..||
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l--~~~l~~~~gw 172 (455)
T TIGR00892 96 LGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPL--NQYLFESFGW 172 (455)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHH--HHHHHHHhCh
Confidence 99999999999998875 4799999999877777888899996 689999999999999999988544 3344556699
Q ss_pred HHHHHHHHHHHHHHHHHHhhccc
Q 004673 162 RLMLGVLSIPALLYFAFAVFFLP 184 (738)
Q Consensus 162 r~~~~I~ail~~~~~~~i~~flp 184 (738)
|+.|++.++++++..++.++..+
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999888765554444433
No 52
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=4.7e-26 Score=242.79 Aligned_cols=172 Identities=24% Similarity=0.345 Sum_probs=136.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhC--CChhHHHHHHHH-----HHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 15 NFLQGWDNATIAGAIVYIKKDLN--LGTTVEGLVVAM-----SLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 15 ~~~~g~~~~~~~~~lp~L~~dfG--lS~s~iGLi~Sl-----~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
++.+.+++..++...+.+.+++. .++++.+++.+. ..++..+++++.|+++||+|||++++++.++.+++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 46788899999998888888764 445666655443 33334568899999999999999999999999999999
Q ss_pred HHhhhhHH--------HHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHH----
Q 004673 88 MLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL---- 155 (738)
Q Consensus 88 ~afa~~~~--------~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l---- 155 (738)
+++++++. .++++|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 99998875 478889999999999999999999999999999999999999999999998766544321
Q ss_pred --hccchhHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 156 --LASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 156 --~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
....+||+.|.+.+++.++.. +.....||+|
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~ 194 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGL-YLRRNLEETP 194 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHH-HHHHhcCCCh
Confidence 135689999988777665533 2234455553
No 53
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=4.2e-25 Score=240.04 Aligned_cols=176 Identities=21% Similarity=0.219 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhH-----HHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTV-----EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~-----iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
...+.++.++.+.......+.+|.+.+++|++..+ .+++.+++.++..++.++.|+++||+|||+++.++.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 33456777888888888889999999999998654 4889999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++.+++.++++++.+++.|++.|++.+ ..+....++.+++|+++|++++++......+|.++++.+.. ...+..+||
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~l~~~~~~~ 172 (408)
T PRK09874 96 IVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGG--LLADSYGLR 172 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHhCHH
Confidence 999999999999999999999999865 45777889999999999999999999999999999865543 334556999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCC
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpES 186 (738)
+.|.+.+++.++..++.++++||.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999988877666666667765
No 54
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=4.4e-26 Score=240.31 Aligned_cols=174 Identities=28% Similarity=0.466 Sum_probs=152.9
Q ss_pred HHHHHHHHHHhHHHHHHHHH-HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp-~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a 89 (738)
++++.++...+...+.+.+| .+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 35677888888888999999 89999999999999999999999999999999999999999999999999999977777
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~a 169 (738)
+++|++.++++|++.|++.+...+...+++.|++|+++|++++++.....++|.++++.+ .....+..+||+.|++.+
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~~~~~~~~~~~ 158 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLL--GGFLISYFGWRWAFLISA 158 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHH--HHHCCCHCHHCCHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccch--hhhhhhcccccccccccc
Confidence 778888999999999999999999999999999999999999999999999999999444 444456779999999999
Q ss_pred HHHHHHHHHHhhcccCC
Q 004673 170 IPALLYFAFAVFFLPES 186 (738)
Q Consensus 170 il~~~~~~~i~~flpES 186 (738)
+++++.+++..++.+++
T Consensus 159 ~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHHHHCCC---
T ss_pred chhhhhhhhHhhhhhhc
Confidence 99988776545666555
No 55
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=1e-24 Score=237.50 Aligned_cols=174 Identities=18% Similarity=0.246 Sum_probs=151.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af 90 (738)
..+..+..........+.+|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 34444455555566667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHH
Q 004673 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (738)
Q Consensus 91 a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ai 170 (738)
+++++.++++|++.|++.+...+...+++.|++|+++|+++.++.+....+|.++++.+.. ...+..+||+.|++.++
T Consensus 88 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~--~l~~~~g~~~~~~~~~~ 165 (392)
T PRK10473 88 AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGH--LIMLKFPWQSLFYTMAA 165 (392)
T ss_pred hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCcChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999888855543 33456699999999998
Q ss_pred HHHHHHHHHhhcccCC
Q 004673 171 PALLYFAFAVFFLPES 186 (738)
Q Consensus 171 l~~~~~~~i~~flpES 186 (738)
++++..++.++++||+
T Consensus 166 ~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 166 MGILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 8887776666777776
No 56
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=8.6e-25 Score=240.31 Aligned_cols=176 Identities=13% Similarity=0.042 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
+....++.++.........+.++.+.+++|+++++.+++.+.+.+++.+++++.|+++||+|||+++..+.++.++++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~ 94 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAA 94 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 33445555555555555555667777899999999999999999999999999999999999999999999999998776
Q ss_pred HH---h-hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhh-HhhHHHHHHHHHhccchhH
Q 004673 88 ML---W-SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGM-FLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 88 ~a---f-a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~-~I~~~~~~~l~l~~~~~Wr 162 (738)
+. + .++++.+++.|++.|+|.+...+....++.+++|+++|++++++.+.+.++|. ++++.+. ....+..||+
T Consensus 95 ~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~--~~l~~~~g~~ 172 (402)
T TIGR00897 95 FIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYS--SYAIPAFGEM 172 (402)
T ss_pred HHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccccchH
Confidence 53 3 35888899999999999988888888899999999999999999999999996 4664333 3334456766
Q ss_pred HHHHHHHHHHHHHHHHHhhcccC
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPE 185 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpE 185 (738)
..++......++..++.+++.++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 173 NTLWSALAFVLTGGVIALFSNKD 195 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC
Confidence 55554443333333333344444
No 57
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=1e-24 Score=245.79 Aligned_cols=180 Identities=13% Similarity=0.014 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHH-hhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH
Q 004673 6 LVAIAATIGNFLQGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (738)
Q Consensus 6 lillil~L~~~~~g~~~~~~~~~lp~L~~-dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~ 84 (738)
..+....++.++..+....++++.+.+.+ ++++|.++.+++.+++.++++++.++.|++.||+|.|+++.++.++.++.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 45666777788888888999999998877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh-----hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHH---Hh
Q 004673 85 GLVMLWS-----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS---LL 156 (738)
Q Consensus 85 s~~~afa-----~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~---l~ 156 (738)
+++.+++ ++++.+++.|++.|++ +..++.....+++|+|+++||+++++....+++|..++..+..... ..
T Consensus 114 ~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~ 192 (462)
T PRK15034 114 CVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVF 192 (462)
T ss_pred HHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999987 8999999999999998 6688999999999999999999999998777777776654443221 10
Q ss_pred -------------ccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 157 -------------ASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 157 -------------~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
...+||..+++.+++.++..++.+++.++.
T Consensus 193 ~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 193 AFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 133599999898888877766666665554
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.94 E-value=4.7e-24 Score=229.75 Aligned_cols=164 Identities=20% Similarity=0.325 Sum_probs=147.6
Q ss_pred hHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 004673 21 DNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIA 100 (738)
Q Consensus 21 ~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~ 100 (738)
....+.+.+|.+.+++|+++++.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++.++++++.++++
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 44566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHh
Q 004673 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (738)
Q Consensus 101 r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~ 180 (738)
|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+... ..+..+||+.|++.++++++..++..
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGW--LLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998655433 34556999999999888887766666
Q ss_pred hcccCC
Q 004673 181 FFLPES 186 (738)
Q Consensus 181 ~flpES 186 (738)
++.||+
T Consensus 164 ~~~~~~ 169 (377)
T PRK11102 164 FFIPET 169 (377)
T ss_pred HhCCcc
Confidence 677765
No 59
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.94 E-value=6.5e-24 Score=232.68 Aligned_cols=176 Identities=18% Similarity=0.177 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHH-HHHhhCCChhHHHHHHHHHHH-HHHHHHHhHHHHHhhhCChHHH-HHHHHHHHHHH
Q 004673 9 IAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPML-ILSSVLYFVSG 85 (738)
Q Consensus 9 lil~L~~~~~g~~~~~~~~~lp~-L~~dfGlS~s~iGLi~Sl~~~-g~a~~~~~~G~LsDRfGRR~~L-liglvI~aI~s 85 (738)
....++.++.+.....+.+.+|. +.+++|++.+++|++.+...+ ++.++.++.++ +||+||||.+ ..+.++.+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~ 96 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLAC 96 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHH
Confidence 34555677777777777787765 678899999999999876544 66666666666 9999998875 56667777888
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchh--hhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHH
Q 004673 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIR--GRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (738)
Q Consensus 86 ~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~R--g~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~ 163 (738)
++.+++++++.+++.+.+.|...+...|....++.++.+++.| +..+++.+.+.++|.++++.++ ....+..|||.
T Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~--~~l~~~~gw~~ 174 (393)
T PRK15011 97 TLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLA--YALAMGFSFTV 174 (393)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHH--HHHHHhcChHH
Confidence 8888999999887666555555556778888888888876655 4456788889999999995444 44455679999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCc
Q 004673 164 MLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 164 ~~~I~ail~~~~~~~i~~flpESp 187 (738)
.|++.++++++..++.++++||.|
T Consensus 175 ~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 175 MYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhcCccC
Confidence 999999888877766677778763
No 60
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=1.7e-23 Score=228.53 Aligned_cols=169 Identities=22% Similarity=0.245 Sum_probs=145.4
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhH
Q 004673 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV 94 (738)
Q Consensus 15 ~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~ 94 (738)
.++..+....+.+.+|.+.+++|.++++.+++.+++.+++.++++++|+++||+|||+++.++.++.+++.+++.+++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 94 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA 94 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH
Confidence 44445667778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 004673 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (738)
Q Consensus 95 ~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~ 174 (738)
+.+++.|+++|++.+...+...+++.|++|++++++..+.......+|.++++.+.. ...+..+||+.|++.+++.++
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~--~l~~~~g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGA--WLLNHFGWQAIFATLFAITLL 172 (401)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCChHHHHHHHHHHHHH
Confidence 999999999999998888888899999999999999999888888888888855543 345567999999998888777
Q ss_pred HHHHHhhcccCC
Q 004673 175 YFAFAVFFLPES 186 (738)
Q Consensus 175 ~~~~i~~flpES 186 (738)
..++. ++.+++
T Consensus 173 ~~~~~-~~~~~~ 183 (401)
T PRK11043 173 LILPT-LRLKPS 183 (401)
T ss_pred HHHHH-HHcCCC
Confidence 55443 344443
No 61
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=1.1e-23 Score=235.71 Aligned_cols=149 Identities=15% Similarity=0.083 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
.++.+..+++..++.+......++.+|.+++++|+++.+.+++.+.+.+++.+++++.|+++||+|||+++.++.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 44555667777888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHH
Q 004673 84 SGLVM---LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (738)
Q Consensus 84 ~s~~~---afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~ 152 (738)
+++++ .++++++.++++|+++|+|.|...+....++.++.|+++|++.+++.+.++++|..++++++..
T Consensus 104 ~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 104 GAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99886 4688999999999999999999999999999998888877778999999999999999776543
No 62
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.94 E-value=4e-23 Score=229.01 Aligned_cols=178 Identities=19% Similarity=0.318 Sum_probs=157.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
...+.+..++...+.....+.+|.+.++++.+.++.++..+++.++++++++++|+++||+|||++++++.+++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 34446666667778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHH
Q 004673 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (738)
Q Consensus 88 ~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I 167 (738)
+++++|++.++++|+++|++.+...+....++.|++|+++|++++++......+|.++++.++.. ..+..+||+.|++
T Consensus 98 ~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~--l~~~~gw~~~f~~ 175 (413)
T PRK15403 98 TLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAA--LMHFVHWKVLFAI 175 (413)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHH
Confidence 99999999999999999999987777778899999999999999999999999999999655533 3455799999999
Q ss_pred HHHHHHHHHHHHhhcccCCc
Q 004673 168 LSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 168 ~ail~~~~~~~i~~flpESp 187 (738)
.++++++.+++.++++||++
T Consensus 176 ~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCc
Confidence 99888877666566778763
No 63
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=3.7e-23 Score=228.16 Aligned_cols=172 Identities=19% Similarity=0.257 Sum_probs=146.9
Q ss_pred HHHHHHHHHHhHHHHHHHHH-HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp-~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a 89 (738)
+..++++.......+.+.++ ++.+++|+|..++|++.+++.++..+..++.|+++||+|||+++.++.++.+++.+++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~ 94 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA 94 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 34555555555566566655 57789999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~a 169 (738)
++++++.+++.|++.|++.+...+...+++.+++|+++|++++++.....++|..+|+.+.... . ..+||+.|++.+
T Consensus 95 ~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l--~-~~g~~~~f~~~~ 171 (400)
T PRK11646 95 IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL--L-QYDFRLVCATGA 171 (400)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HhhHHHHHHHHH
Confidence 9999999999999999999988899999999999999999999999999999999996555444 3 459999999988
Q ss_pred HHHHHHHHHHhhcccC
Q 004673 170 IPALLYFAFAVFFLPE 185 (738)
Q Consensus 170 il~~~~~~~i~~flpE 185 (738)
+++++..++..++.||
T Consensus 172 ~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 172 VLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHhCCc
Confidence 8777655444455554
No 64
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.1e-25 Score=248.38 Aligned_cols=186 Identities=17% Similarity=0.259 Sum_probs=174.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHH
Q 004673 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (738)
Q Consensus 1 ~~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI 80 (738)
|++.++.++++++.++++..|+..+....+.+++.|+++++..|++.+.+.+++++.++++|+|+|||.||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 35667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccch
Q 004673 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (738)
Q Consensus 81 ~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~ 160 (738)
++++.+.+++++.+|++.++|.+.|+|.+...|+.+++++|.+|..+|++.+++++++.++|..+|++.+........ .
T Consensus 108 W~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-~ 186 (493)
T KOG1330|consen 108 WTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-W 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999877655543333 3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 161 WRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 161 Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
|||.|.+.++++++..++.+++++|.+
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999999999999999999874
No 65
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=5.7e-23 Score=223.95 Aligned_cols=183 Identities=19% Similarity=0.204 Sum_probs=157.6
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
+.+..+.++.+..++..+......+.+|.+.+++|+|+.+.+++.+++.+++.++.+++|+++||+|||+++.++.++.+
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~ 84 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFI 84 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 34555555666666666777788888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++.+++.++++++.+++.|++.|++.+...+....++.|.+++++|++++++...+..+|..+++.+.. ...+..+||
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~--~l~~~~g~~ 162 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGG--LLTTLFGWR 162 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhccChH
Confidence 999999999999999999999999999888888889999999999999999999999999988855543 334556999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpESp 187 (738)
+.|++.++++++..++..++.||++
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999988877766655566677763
No 66
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=2.8e-23 Score=228.73 Aligned_cols=174 Identities=12% Similarity=0.138 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHH-HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp-~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~ 88 (738)
.+.+++++.........+.+| ++.+++|++..+.|++.+++.+++.+++++.|+++||+|||++++++.++.+++.++.
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 344566666666677666665 5677899999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHH
Q 004673 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (738)
Q Consensus 89 afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ 168 (738)
+++++++.++++|++.|.+.+...+...++..|.+|+++|+++.++.....++|.++++.+..... . .+||..|.+.
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~--~-~g~~~~f~~~ 167 (395)
T PRK10054 91 PLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV--M-QSINLPFWLA 167 (395)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-hccCcHHHHH
Confidence 999999999999999999888888889999999999999999999999999999999966655443 2 5899999998
Q ss_pred HHHHHHHHHHHhhcccCC
Q 004673 169 SIPALLYFAFAVFFLPES 186 (738)
Q Consensus 169 ail~~~~~~~i~~flpES 186 (738)
++++++..++..+++|+.
T Consensus 168 ~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 168 AICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 888777655555556554
No 67
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=9e-23 Score=231.81 Aligned_cols=173 Identities=16% Similarity=0.167 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhh-----CChHH-HHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRPM-LILSSVLYFV 83 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf-----GRR~~-LliglvI~aI 83 (738)
.+++..+..+......++.+|...++.|.+.++++.+ +.....+ ++.+++|.++||+ |||+. ++++.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 4455556677777888889999999999999999987 3333444 6889999999999 99885 6678787878
Q ss_pred HHHHHHhh---hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhc-cc
Q 004673 84 SGLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-SP 159 (738)
Q Consensus 84 ~s~~~afa---~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~-~~ 159 (738)
+.+.+++. .+++.+.+.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+.... .+ ..
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l--~~~~~ 171 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWL--ADRYL 171 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--Hhccc
Confidence 87777774 47889999999999999999999999999999999999999999999999999995554333 44 45
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 160 SWRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 160 ~Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
|||.+|++.++++++.++. .+++||++
T Consensus 172 GWr~~f~i~a~l~ll~~l~-~~~~~e~~ 198 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIA-TLLAPEPT 198 (491)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 9999999999887765544 34467763
No 68
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=9.9e-24 Score=225.62 Aligned_cols=177 Identities=24% Similarity=0.181 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH-HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~-L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~ 88 (738)
..+++.++.......+++..|. +.+++|+++.+.+++.+++.++++++.++.|+++||+|||+++.++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4566666667777888889995 999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh-hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh--------ccc
Q 004673 89 LWSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL--------ASP 159 (738)
Q Consensus 89 afa~-~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~--------~~~ 159 (738)
++++ +++.+++.|++.|++.+. ++....++.|++|+++|++++++.....++|..+++.+....... ...
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~ 163 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHL 163 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 9999 999999999999999664 466789999999999999999999988888887776554333221 134
Q ss_pred hhHHHH-HHHHHHHHHHHHHHhhcccCCc
Q 004673 160 SWRLML-GVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 160 ~Wr~~~-~I~ail~~~~~~~i~~flpESp 187 (738)
+||+.| .+.+++.++..++.+++.+|+|
T Consensus 164 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 164 AWGWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred cccchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 899999 4445555555555556666664
No 69
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=4.9e-23 Score=228.78 Aligned_cols=171 Identities=15% Similarity=0.094 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
++.+++..++.+...+..++.+|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45667778888888899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHh---hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh--------
Q 004673 88 MLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL-------- 156 (738)
Q Consensus 88 ~af---a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~-------- 156 (738)
+.. .++++.+++.|++.|+|.|...+....++.+..|+++|++..++.+.+.++|..+++.+.......
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 654 358999999999999999999999999999999999999999999999999999997766554322
Q ss_pred ----------------ccchhHHHHHHHHHHHHHHHHH
Q 004673 157 ----------------ASPSWRLMLGVLSIPALLYFAF 178 (738)
Q Consensus 157 ----------------~~~~Wr~~~~I~ail~~~~~~~ 178 (738)
+..+||++|++.++++++.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1236999999999877765433
No 70
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=1.8e-22 Score=222.30 Aligned_cols=171 Identities=16% Similarity=0.178 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a 89 (738)
.++++.++...+...+....+.+.++++.++.+.+++.+.+.+++.+..++.|+++||+|||++++++.++.++++++++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 34566666666555556666777899999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~a 169 (738)
++.+. ++.|+++|++.+...|...+++.|++|+++|++++++.+....+|.++|+.++... .+. .|+..+.+.+
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l--~~~-~~~~~~~i~~ 160 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL--ADP-HAEAALAVCA 160 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH-HHHHHHHHHH
Confidence 87664 67899999999999999999999999999999999999999999999996665443 332 4888877766
Q ss_pred HHHHHHHHHHhhcccCCc
Q 004673 170 IPALLYFAFAVFFLPESP 187 (738)
Q Consensus 170 il~~~~~~~i~~flpESp 187 (738)
++.++. ++..+.+||+|
T Consensus 161 ~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 161 LIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHH-HHHHhcCCCCc
Confidence 554443 34456677764
No 71
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=2.1e-23 Score=228.52 Aligned_cols=384 Identities=18% Similarity=0.195 Sum_probs=293.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
....+.+..+......+....++++.+.+.+++++|+.|.+++.++..+..++.-++.|.+.||||.|++..++.++..+
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~I 91 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLI 91 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHH
Confidence 34556666677777777888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh---hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccch
Q 004673 84 SGLVMLWSP---NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (738)
Q Consensus 84 ~s~~~afa~---~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~ 160 (738)
-++..+++. +++++++++++.|++.+ .+.....+++.++|++++|.++++.. .+++|..+........... .+
T Consensus 92 P~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~--~g 167 (417)
T COG2223 92 PCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA--FG 167 (417)
T ss_pred HHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH--Hh
Confidence 999999975 44599999999999855 55888899999999999999999999 8999998886666554332 35
Q ss_pred ---hHHHHHHHHHHHHHHHHHHhhcccCCchhhhccCcchHHHHHHHHhhccccchhHHHHHHhhhccCCccchhhhhcC
Q 004673 161 ---WRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIG 237 (738)
Q Consensus 161 ---Wr~~~~I~ail~~~~~~~i~~flpESp~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (738)
||....+..+..++.++..+++..|.|......++...
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--------------------------------------- 208 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--------------------------------------- 208 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------------------------------------
Confidence 99999999998888888888888887531000000000
Q ss_pred CCCCCCCCCCCcccchhhhccCCcCCCccccccccCcchhhhhhhcccCCCCCcccCCccccccccccccCCCCCCcccc
Q 004673 238 PGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRST 317 (738)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (738)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccCCccchhhhhhcCCccccccccCCCCCCCCCCccccccccccccccCCCCCCcchhhcccccc
Q 004673 318 LFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSL 397 (738)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (738)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCccccccccCCCccccchhhhhccCCCCCCCccccccccccCCCCCCCCcccccCCCCCCCchhHHHhhhhhccch
Q 004673 398 MQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPA 477 (738)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~av~~i~~ 477 (738)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcccCCCCCCCCCCCCccccCCChHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcC
Q 004673 478 LYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLG 557 (738)
Q Consensus 478 lyvR~~v~Esp~f~~~~~~~e~~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~ 557 (738)
.+.+.+++ ++-.+...+..+.+|.++-++..++|.++++ ++|
T Consensus 209 --------------------------~~~~~v~~----~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~--------~fg 250 (417)
T COG2223 209 --------------------------AQLKAVFS----NKDTWLLSLLYFATFGGFVGFSAYLPMYLVT--------QFG 250 (417)
T ss_pred --------------------------hHHHHHhc----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcC
Confidence 00111111 1113334455566777888899999999988 688
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHH
Q 004673 558 ISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCC 637 (738)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 637 (738)
+++.+++... ....+.+.+.++++|+|+||+|.++.++..+.+++++..++.+..+.. .........+...+..+.+
T Consensus 251 ~~~~~Ag~~a-~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~l~~~ 327 (417)
T COG2223 251 LSPVTAGLIA-FLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGF--GHGGSFVVFVAVFLALFVF 327 (417)
T ss_pred CChhhHHHHH-HHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccc--ccCcchHHHHHHHHHHHHH
Confidence 8886666554 556677888999999999999999999999888888877776654222 1111222333334444444
Q ss_pred hhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHhcc
Q 004673 638 FVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG-LAGAFGVYAVVCFISWVFVFLRVP 713 (738)
Q Consensus 638 ~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 713 (738)
.+.+-+. .+-+++.++|.+ -|...|+..++..+|+..-|..++...+..| +..+|+++..++++++++.+....
T Consensus 328 ~G~GnGs-vfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 328 AGLGNGS-VFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred hccCcch-heeechHHHHhh-hhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444443 346667777764 6888999999999999999999999999998 778888888888888887776543
No 72
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.5e-23 Score=237.14 Aligned_cols=153 Identities=20% Similarity=0.354 Sum_probs=139.9
Q ss_pred HhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhh
Q 004673 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIARLLDGFGVGLA 111 (738)
Q Consensus 34 ~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~--~~~~liI~r~l~G~g~G~~ 111 (738)
.+++++.++.+++.+++++|+.+++++.|+++||+|.|+++.++.++.++++++..++- +++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46889999999999999999999999999999999999999999999999999999865 5568899999999999999
Q ss_pred hhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 112 VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 112 ~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~-~~Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
+|+...+...|.|+++|++..++...+..+|.+++. .....+.+. .||+..|++.++++++..++.+++..|+|.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~m--p~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITM--PVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999984 334444555 799999999999999999888888888875
No 73
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.92 E-value=1.4e-22 Score=217.88 Aligned_cols=150 Identities=20% Similarity=0.316 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004673 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARL 102 (738)
Q Consensus 23 ~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~ 102 (738)
..+++.+|.+.+++|++.++.+++.+++.+++.++.++.|+++||+|||+++.++.++.+++.+++ .+++.+.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 556788999999999999999999999999999999999999999999999999999999888887 7789999999999
Q ss_pred HHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 004673 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (738)
Q Consensus 103 l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~ 174 (738)
+.|++.+...+....++.|++| ++|++++++.+.+..+|..+++.+..........+||+.|.+.++++++
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 9999999988888889999987 5799999999999999999886655443322222499999887765543
No 74
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=3.9e-22 Score=245.46 Aligned_cols=164 Identities=12% Similarity=0.040 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHhhCCCh--hHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---hhhHHHHH
Q 004673 24 TIAGAIVYIKKDLNLGT--TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW---SPNVYVLC 98 (738)
Q Consensus 24 ~~~~~lp~L~~dfGlS~--s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af---a~~~~~li 98 (738)
....+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.+++.+++.+ +++++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (1146)
T PRK08633 28 HKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAF 107 (1146)
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 33444556667777654 45789999999999999999999999999999999998877666655443 57899999
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhc-------cchhHHHHHHHHHH
Q 004673 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-------SPSWRLMLGVLSIP 171 (738)
Q Consensus 99 I~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~-------~~~Wr~~~~I~ail 171 (738)
++|+++|++.+...++..+++.|++|+++|++++++.+++.++|.++|+.++..+.... ..+|++.+.+.++.
T Consensus 108 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 108 AVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred HHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977665543220 12455555554444
Q ss_pred HHHHHHHHhhcccCCc
Q 004673 172 ALLYFAFAVFFLPESP 187 (738)
Q Consensus 172 ~~~~~~~i~~flpESp 187 (738)
..+..++..+.+|++|
T Consensus 188 ~~~~~~~~~~~~~~~~ 203 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVP 203 (1146)
T ss_pred HHHHHHHHHhcCcCCC
Confidence 4333444455667764
No 75
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.92 E-value=1.7e-21 Score=212.87 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=127.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHH----HHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPML----ILSSVLYFVSGL 86 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~L----liglvI~aI~s~ 86 (738)
+.++++..+...+...|.+|.+.+++|+|.+++|++.+++.++..++++++|.++||+||+... .++..+..+ +
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 5677788888889999999999999999999999999999999999999999999999985433 222222222 2
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHH
Q 004673 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (738)
Q Consensus 87 ~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~ 166 (738)
++.++++++.+++.|+++|.+.+...|...++..++ .++|+++.+......++|.++++.+. ....+..|||..|.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~--g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALF--GGLIGMFDEQNILA 162 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHH--HHHHHHcChhHHHH
Confidence 444678999999999999999988888888887665 46789999999999999999995544 44456679999998
Q ss_pred HHHHHH
Q 004673 167 VLSIPA 172 (738)
Q Consensus 167 I~ail~ 172 (738)
+.+++.
T Consensus 163 ~~~~~~ 168 (382)
T TIGR00902 163 ILTAGL 168 (382)
T ss_pred HHHHHH
Confidence 876553
No 76
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=3.1e-23 Score=236.91 Aligned_cols=181 Identities=13% Similarity=0.129 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 4 ~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
-|.+++..++.++...-....++.+.+.++++++.+..+++|+.++....+.+.+++.+.+.||+|.|++.++|.++.++
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 46667777777777766667777888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 84 SGLVMLWSPNVYVLCIA-RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 84 ~s~~~afa~~~~~liI~-r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
|.++..|+++++.+++. -++.|+|.|..+....+.+..||++| |++|+++...+.++|.++- +.+.-.+.+..|||
T Consensus 124 g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~--~~l~~~l~~~~G~r 200 (509)
T KOG2504|consen 124 GLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVF--PPLLKYLLSKYGWR 200 (509)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeH--HHHHHHHHHHhCcH
Confidence 99999999999988887 89999999999999999999888655 9999999999999999887 44445557778999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpESp 187 (738)
+.+++.+.+.+..++......|.++
T Consensus 201 ~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 201 GALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999999999877766666666554
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.91 E-value=4.4e-21 Score=210.76 Aligned_cols=172 Identities=16% Similarity=0.139 Sum_probs=142.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhh-----CChH-HHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRP-MLILSSVLYFVS 84 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf-----GRR~-~LliglvI~aI~ 84 (738)
...-++.++...+.....+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| ++.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 344567788888888999999999999999999999877776 68899999999999 8765 788888888888
Q ss_pred HHHHHhh---hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhcc-ch
Q 004673 85 GLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PS 160 (738)
Q Consensus 85 s~~~afa---~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~-~~ 160 (738)
..+.++. .+++.+++..++.++..+...++..+++.|++|+++|++++++...+.++|.+++..+.... .+. .|
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l--~~~~~g 159 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL--ADRVLG 159 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH--HhcccC
Confidence 8887776 46788888888889988989999999999999999999999999999999999985544333 343 49
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 161 WRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 161 Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
||.+|++.+++.++..+ ..++.||++
T Consensus 160 w~~~f~i~a~~~l~~~l-~~~~~~e~~ 185 (402)
T PRK11902 160 WGNTYLLMAGLMLAGAL-TTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhcCCCc
Confidence 99999999887766443 345667653
No 78
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.8e-22 Score=229.52 Aligned_cols=184 Identities=19% Similarity=0.155 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 5 ALVAIAATIGNFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 5 ~lillil~L~~~~~g~~~~~~~~~l-p~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
+.++..++...+....+...++-.. ..+.+|.+...++.+.+.+++.++|+++.++++.|.||++..+.+....+++++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 4555666777777777777665432 236689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHH----hccc
Q 004673 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL----LASP 159 (738)
Q Consensus 84 ~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l----~~~~ 159 (738)
..++....+|++.+++.|++.|+.+++.+|+...+++.|+.+++||+.++++.+..++|.++|.++..+... ....
T Consensus 124 ~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 124 FGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999988888543 2335
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 160 ~Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
||||+|++.++++++..+++++++|+.|.
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecCChh
Confidence 99999999999999999999999999985
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=4.8e-21 Score=213.12 Aligned_cols=167 Identities=16% Similarity=0.033 Sum_probs=119.1
Q ss_pred HHHHHHHHHHhHHHHHH-HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCC-hHHHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSVLYFVSGLVM 88 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~-~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGR-R~~LliglvI~aI~s~~~ 88 (738)
+++.+|++....++..+ ..+++.+++|++..++|++.+++.++..++++++|.++||+|| |+++.++.++.+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 45566666767777655 4456778899999999999999999999999999999999965 888999999998999899
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHh--------hcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccch
Q 004673 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYIS--------ETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (738)
Q Consensus 89 afa~~~~~liI~r~l~G~g~G~~~~~~~a~Ia--------E~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~ 160 (738)
.+.++++.+++.|++.|++.+...+...++.. |......|.+..+ ++|.++++++.... .....
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l--~~~~~ 158 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL--DIELS 158 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh--cccch
Confidence 99999999999999999987777666555432 2222233445444 35666664444322 22224
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 161 WRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 161 Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
|+ +|++.+++.++.+++ .+++||.|
T Consensus 159 ~~-~f~~~~~~~~~~~~~-~~~~~e~~ 183 (418)
T TIGR00889 159 NI-QLYITAGSSALLGVF-ALTLPDIP 183 (418)
T ss_pred hH-HHHHHHHHHHHHHHH-HhcCCCCC
Confidence 55 455555555554433 55777764
No 80
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.90 E-value=2.3e-21 Score=213.30 Aligned_cols=171 Identities=17% Similarity=0.245 Sum_probs=133.0
Q ss_pred HHHHHhHHHHHH-HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh----hCC-hHHHHHHHHHHHHHHHHHH
Q 004673 16 FLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGR-RPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 16 ~~~g~~~~~~~~-~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR----fGR-R~~LliglvI~aI~s~~~a 89 (738)
+........+.. ..+++.+++|+++.++|++.++..+..++..++.|+++|| +|| |+.++++.++.+++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 333444444444 4456778899999999999999999999999999999998 677 4567788888888888887
Q ss_pred hhhh------HHHHHHHHHHHHHHHhhhhhhHHHHHhhcC-CcchhhhhchHhHHHhhhhhHhhHHHHHHHHH-----hc
Q 004673 90 WSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL-----LA 157 (738)
Q Consensus 90 fa~~------~~~liI~r~l~G~g~G~~~~~~~a~IaE~~-P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l-----~~ 157 (738)
+.++ ...+++.+++.+++.+...++..++..|.. ++++|+++.++.+.+..+|..++..+...... .+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~ 168 (437)
T TIGR00792 89 TTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDD 168 (437)
T ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 6543 456777889999998888778888888987 57889999999999999988777554433321 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 158 SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 158 ~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
..+||+++.+.++++++..++.+++.||+
T Consensus 169 ~~g~~~~~~i~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 169 KFGWFMFALVLALIGVVSLIICFFGTKER 197 (437)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 45899999999998888776666667765
No 81
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=5.2e-21 Score=211.09 Aligned_cols=172 Identities=16% Similarity=0.075 Sum_probs=110.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHH-HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~-L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a 89 (738)
+.+.+++.......+.+.+|. +.+++|++..+.|++.+++.+++.+++++.|+++||+|||++++++..+.+++.....
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 94 (420)
T PRK09528 15 FSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFF 94 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 344555555555666666664 5666999999999999999999999999999999999999999887766655443221
Q ss_pred h---hhhHH-HHHHHHHHHHHHHhhhhhhHHHHHhhcCC--cchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHH
Q 004673 90 W---SPNVY-VLCIARLLDGFGVGLAVTLVPLYISETAP--SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (738)
Q Consensus 90 f---a~~~~-~liI~r~l~G~g~G~~~~~~~a~IaE~~P--~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~ 163 (738)
. +.... ......++.++..+...+.....+.++.+ .+++|+..+......++|.++++.+.... .+ .+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l--~~-~~~~~ 171 (420)
T PRK09528 95 IYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGIL--FN-INPQI 171 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHH--Hh-cCchH
Confidence 1 11110 11112223333333332222222333322 24567788888888899999986664433 22 38999
Q ss_pred HHHHHHHHHHHHHHHHhhcccC
Q 004673 164 MLGVLSIPALLYFAFAVFFLPE 185 (738)
Q Consensus 164 ~~~I~ail~~~~~~~i~~flpE 185 (738)
+|++.++++++.+++.++..+|
T Consensus 172 ~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 172 NFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred hHHHHHHHHHHHHHHHhccccc
Confidence 9999888877765554444444
No 82
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.90 E-value=4.9e-21 Score=205.69 Aligned_cols=161 Identities=17% Similarity=0.187 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhh-----CChHH-HHHHHHHHHHHHHHHHhh---h
Q 004673 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRPM-LILSSVLYFVSGLVMLWS---P 92 (738)
Q Consensus 22 ~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf-----GRR~~-LliglvI~aI~s~~~afa---~ 92 (738)
...+++.+|.+.+++|+|.++.+++... .+...+ .+++|.++||+ ||||. ++.+.++.+++.++.++. .
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3456778899999999999999999755 444454 89999999998 89886 567788888887777776 4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccch--------hHHH
Q 004673 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS--------WRLM 164 (738)
Q Consensus 93 ~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~--------Wr~~ 164 (738)
+++.+.+..++.+++.+...+...+++.|++|+++|++++++...+.++|.++++.+.... ....+ ||.+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l--~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVL--ASPEFANTGLITLWGYI 159 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHH--hhhcccccccccccHHH
Confidence 6677778888899998988899999999999999999999999999999999986555433 33345 9999
Q ss_pred HHHHHHHHHHHHHHHhhcccCC
Q 004673 165 LGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 165 ~~I~ail~~~~~~~i~~flpES 186 (738)
|++.+++.++..++.++..||+
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCC
Confidence 9999887777555544456664
No 83
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.89 E-value=6.7e-21 Score=235.53 Aligned_cols=176 Identities=14% Similarity=0.084 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH-HHHHhhCCCh-hHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHH---HHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIV-YIKKDLNLGT-TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL---SSVLYF 82 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp-~L~~dfGlS~-s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~Lli---glvI~a 82 (738)
.+..+++.+.++.....+...+. .+..+.+.+. ...++..+++.+.+++.++++|+++||+|||+++.. +.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~ 96 (1140)
T PRK06814 17 FWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIA 96 (1140)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHH
Confidence 33445555555555544443333 3444444433 457888999999999999999999999999997533 333333
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
+..++....++++.++++|+++|++.+...|+..+++.+++|+++|++++++.+++.++|.++|+.++.. +....+|+
T Consensus 97 ~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~--l~~~~~~~ 174 (1140)
T PRK06814 97 ALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGL--ATISGNFV 174 (1140)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHH--HHhccccH
Confidence 3333334458999999999999999999999999999999999999999999999999999999655544 45566999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCC
Q 004673 163 LMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flpES 186 (738)
+.|.+.++++++ .++..+++|++
T Consensus 175 ~~~~~~~~~~~~-~~~~~~~~~~~ 197 (1140)
T PRK06814 175 ILVALLMGIAVL-GWLASLFIPKT 197 (1140)
T ss_pred HHHHHHHHHHHH-HHHHHhhCCCC
Confidence 999444444444 33445556655
No 84
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=4.4e-20 Score=213.74 Aligned_cols=197 Identities=14% Similarity=0.094 Sum_probs=152.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
++|..+++......+.+.. ..++.+.|.+++++|++..+.+++.++. ..+++++++.|++.||+|+|++++++.++++
T Consensus 25 ~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 4555555555444444433 3455677889999999999999998874 4556778889999999999999999999999
Q ss_pred HHHHHHHhh------hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh
Q 004673 83 VSGLVMLWS------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL 156 (738)
Q Consensus 83 I~s~~~afa------~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~ 156 (738)
++.++++++ .+++.+++.|++.|+|.+...+....++.+|+| ++||++.++...+..+|.++...+......
T Consensus 103 iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~- 180 (591)
T PTZ00207 103 LGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS- 180 (591)
T ss_pred HHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999997 689999999999999999999999999999997 679999999999999999865434333322
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcccCCc--hhhhccCcchHHHHHHHH
Q 004673 157 ASPSWRLMLGVLSIPALLYFAFAVFFLPESP--RWLVSKGKMLEAKQVLQR 205 (738)
Q Consensus 157 ~~~~Wr~~~~I~ail~~~~~~~i~~flpESp--~~~~~~~~~~~a~~~~~~ 205 (738)
.+|+..|++.++++++..++.++++++.| ++...+++.+++.+..++
T Consensus 181 --~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~ 229 (591)
T PTZ00207 181 --DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRL 229 (591)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHh
Confidence 37999999999988887777677665554 444344444444444443
No 85
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.89 E-value=4.9e-20 Score=201.14 Aligned_cols=157 Identities=13% Similarity=0.026 Sum_probs=123.6
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCCh----HHHHHHHHHHHHHHHHH
Q 004673 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRR----PMLILSSVLYFVSGLVM 88 (738)
Q Consensus 13 L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR----~~LliglvI~aI~s~~~ 88 (738)
..++......+.+.+.+|.+.+++|.|..++|++.+++.++..++++++|.++||+||| +.+.++..+. .....
T Consensus 11 ~~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 11 LSYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 33556666678888899999999999999999999999999999999999999999994 3333222222 22333
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHH
Q 004673 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (738)
Q Consensus 89 afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ 168 (738)
..+++++.+++.|++.|++.+...+...+++.++ .++|+++.+......++|.++++.+ +....+..|||.+|++.
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~l--gg~l~~~~g~~~~f~~~ 164 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSAL--TGKLVSWFGEQAILWIL 164 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHH--HHHHHHHcChhHHHHHH
Confidence 4468899999999999999998888888887776 4568899999999999999999544 44456667999999887
Q ss_pred HHHHHHH
Q 004673 169 SIPALLY 175 (738)
Q Consensus 169 ail~~~~ 175 (738)
++..++.
T Consensus 165 ~~~~~~~ 171 (382)
T PRK11128 165 TAGVASM 171 (382)
T ss_pred HHHHHHH
Confidence 7654443
No 86
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.89 E-value=3.4e-20 Score=202.86 Aligned_cols=172 Identities=16% Similarity=0.075 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH-HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~-L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~ 88 (738)
.+...+++.......+.+.+|. +.+++|++..+.+++.+++.+++.+++++.|+++||+|||+.++.+.++.+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 4455666677777777887775 556799999999999999999999999999999999999999998877766554432
Q ss_pred H---hh-----hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccch
Q 004673 89 L---WS-----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (738)
Q Consensus 89 a---fa-----~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~ 160 (738)
. +. +.+..+++.|++.|++.+...+....+..+..+ ++++..+......++|.++++.++... . ..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l--~-~~~ 160 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGIL--F-SID 160 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhh--h-ccC
Confidence 2 11 223445667899999888888888777777543 345666777788889999886554332 2 349
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 161 WRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 161 Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
||++|++.++++++..++.++..||.
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999888887665544444443
No 87
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.88 E-value=2.3e-19 Score=207.26 Aligned_cols=171 Identities=20% Similarity=0.253 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a 89 (738)
.+++......+.....+..++++.+|+|-+ ....|+.+...++.+++.++.|+|+|.||||.+++.+.++..+|+++++
T Consensus 48 ~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a 126 (599)
T PF06609_consen 48 AFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA 126 (599)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh
Confidence 344444444555555567788999999976 5577899999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~a 169 (738)
-++|...++.+-.+.|+|.|... .....++|..|.|.|+....+...........++.. ......+.+|||.|++.+
T Consensus 127 tA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~i--a~~~~~~~~WRw~~~~~~ 203 (599)
T PF06609_consen 127 TAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLI--AQLFAAHSGWRWIFYIFI 203 (599)
T ss_pred cCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHH--HHHhccCCCcchHHHHHH
Confidence 99999999999999999988775 456669999999999877766554443433333222 222344569999999999
Q ss_pred HHHHHHHHHHhhccc
Q 004673 170 IPALLYFAFAVFFLP 184 (738)
Q Consensus 170 il~~~~~~~i~~flp 184 (738)
++..+.+++.+++..
T Consensus 204 i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 204 IWSGIALVLIFFFYF 218 (599)
T ss_pred HHHHHHHHHHHHHhC
Confidence 987776655454443
No 88
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.87 E-value=1e-20 Score=221.62 Aligned_cols=180 Identities=16% Similarity=0.170 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHH
Q 004673 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (738)
Q Consensus 6 lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s 85 (738)
+.++.+++..+......+.++..++.+.++|+++..+.|++.+.+.++++++.++.++++||+|||+++.++.+++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 33 VFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 33455566778888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh---------------------------------------------------hHHHHHHHHHHHHHHHhhhhhh
Q 004673 86 LVMLWSP---------------------------------------------------NVYVLCIARLLDGFGVGLAVTL 114 (738)
Q Consensus 86 ~~~afa~---------------------------------------------------~~~~liI~r~l~G~g~G~~~~~ 114 (738)
+++++++ .+..++++|+++|+|.+..++.
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~ 192 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPL 192 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhc
Confidence 9998763 2567788999999999999999
Q ss_pred HHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhc-c-------------------chhHHHHHHHHHHHHH
Q 004673 115 VPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-S-------------------PSWRLMLGVLSIPALL 174 (738)
Q Consensus 115 ~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~-~-------------------~~Wr~~~~I~ail~~~ 174 (738)
..+++.|++|+++|+++.++.+....+|.++|++++....... . .+||..|++.++++++
T Consensus 193 ~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l 272 (633)
T TIGR00805 193 GISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALL 272 (633)
T ss_pred CchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987766554221 0 1388899999988887
Q ss_pred HHHHHhhcccCC
Q 004673 175 YFAFAVFFLPES 186 (738)
Q Consensus 175 ~~~~i~~flpES 186 (738)
..+. ++++|+.
T Consensus 273 ~~v~-l~~~p~~ 283 (633)
T TIGR00805 273 TSIP-FFFFPKA 283 (633)
T ss_pred HHHH-HHhCccc
Confidence 6654 4555544
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.87 E-value=3.3e-19 Score=203.06 Aligned_cols=174 Identities=13% Similarity=0.105 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHhHHHHHH-HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh-hCChHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSG 85 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~-~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR-fGRR~~LliglvI~aI~s 85 (738)
+..+++..+...+....... ...++.+++|++.++.+++.+.+.....+..+++|+++|| +|||++++++.++++++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 34444444545444444433 4457788999999999999999998888999999999999 999999999999999999
Q ss_pred HHHHhhhhHHH-HHHHHHHHHHHHhhhhhhHHHHHhhcCCcc--hhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhH
Q 004673 86 LVMLWSPNVYV-LCIARLLDGFGVGLAVTLVPLYISETAPSE--IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (738)
Q Consensus 86 ~~~afa~~~~~-liI~r~l~G~g~G~~~~~~~a~IaE~~P~k--~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr 162 (738)
++++++.+... ++++|+++|+|.|...+...+++.|.+|++ +|+++.++...+.++|.++++.++ ....+..|||
T Consensus 96 ~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~--g~l~~~~gw~ 173 (489)
T PRK10207 96 FMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA--PVIADKFGYS 173 (489)
T ss_pred HHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH--HHHHHhhChH
Confidence 99999876444 557899999999999999999999999877 457899999999999999995544 4445667999
Q ss_pred HHHHHHHHHHHHHHHHHhhccc
Q 004673 163 LMLGVLSIPALLYFAFAVFFLP 184 (738)
Q Consensus 163 ~~~~I~ail~~~~~~~i~~flp 184 (738)
+.|++.++ +++..++.+++.+
T Consensus 174 ~~F~i~~i-~~~~~~~~~~~~~ 194 (489)
T PRK10207 174 VTYNLCGA-GLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHH-HHHHHHHHHHHcc
Confidence 99998654 4443444444444
No 90
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.86 E-value=2.8e-18 Score=187.42 Aligned_cols=175 Identities=11% Similarity=-0.045 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHH--HHHHHHHHHHHHHhH-HHHHhhhCChHHHHHHHHHH-HH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLV--VAMSLIGATAITTCS-GPISDWLGRRPMLILSSVLY-FV 83 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi--~Sl~~~g~a~~~~~~-G~LsDRfGRR~~LliglvI~-aI 83 (738)
+..++..++.++...+...+.+|.+.++.|.|.+++|++ .++..+...+.+++. ++..||+||||..++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 445667779999999999999999999999999999997 466677777777777 45789999998875555332 22
Q ss_pred HHHHHH---hhhh-HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccc
Q 004673 84 SGLVML---WSPN-VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (738)
Q Consensus 84 ~s~~~a---fa~~-~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~ 159 (738)
.....+ ...+ ...++..-++.++..+...+..-++..|..++++++..++....+..+|.+++..+. ....+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~--~~l~~~~ 160 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGT--LVLFGKF 160 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHH--HHHHHHh
Confidence 222222 2222 334444556666777777778888889999999889999988888899999885433 3345566
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccc
Q 004673 160 SWRLMLGVLSIPALLYFAFAVFFLP 184 (738)
Q Consensus 160 ~Wr~~~~I~ail~~~~~~~i~~flp 184 (738)
|||..|++.+++.++..+..++..|
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999888776555433333
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.86 E-value=1.1e-18 Score=197.82 Aligned_cols=166 Identities=9% Similarity=0.062 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHH-HHh--hCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh-hCChHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYI-KKD--LNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFV 83 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L-~~d--fGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR-fGRR~~LliglvI~aI 83 (738)
+..+.+..++.......+.+.+|.+ .++ +|++..+.+++.+.+.+++.++.+++|+++|| +|||++++++.+++++
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 3445566666666666666666654 555 89999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcch---hhhhchHhHHHhhhhhHhhHHHHHHHHHhccch
Q 004673 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI---RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (738)
Q Consensus 84 ~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~---Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~ 160 (738)
+.++.+++++++.++++|++.|+|.|...+...+++++++|+++ |+.+.++.+.+.++|.++|+.+.. ...+..+
T Consensus 92 g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g--~l~~~~g 169 (475)
T TIGR00924 92 GHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAG--VIAENYG 169 (475)
T ss_pred HHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHH--HHHHhcC
Confidence 99999999999999999999999999999999999999998754 888999999999999999965543 3455569
Q ss_pred hHHHHHHHHHHHHHH
Q 004673 161 WRLMLGVLSIPALLY 175 (738)
Q Consensus 161 Wr~~~~I~ail~~~~ 175 (738)
||+.|++.++..++.
T Consensus 170 ~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 170 YHVGFNLAAVGMVIG 184 (475)
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999988655543
No 92
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.85 E-value=4.5e-18 Score=195.33 Aligned_cols=162 Identities=19% Similarity=0.181 Sum_probs=132.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af 90 (738)
++++.++...+..+....++.+..+..-|+..++++..+..+-..+.++++|.++||+.||++++.+-++.++..++.++
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~ 94 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAV 94 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666667777777788889999999999999999999999999999999999999999887766555543
Q ss_pred h-----hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHH
Q 004673 91 S-----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (738)
Q Consensus 91 a-----~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~ 165 (738)
. .+.+.+++.-++.|++.+...|...+++.|.+|+++...++++.+...++..++|+.++. .+....|-.+.|
T Consensus 95 l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG--~Lva~~G~~~~f 172 (524)
T PF05977_consen 95 LAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG--ILVAFFGAAAAF 172 (524)
T ss_pred HHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH--HHHHHHHHHHHH
Confidence 2 478899999999999999999999999999999999999999999999999999854443 333344667778
Q ss_pred HHHHHHHHH
Q 004673 166 GVLSIPALL 174 (738)
Q Consensus 166 ~I~ail~~~ 174 (738)
.+.++..++
T Consensus 173 ~inalsfl~ 181 (524)
T PF05977_consen 173 LINALSFLI 181 (524)
T ss_pred HHHHHHHHH
Confidence 777654444
No 93
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.85 E-value=4.2e-18 Score=186.17 Aligned_cols=171 Identities=19% Similarity=0.126 Sum_probs=149.5
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHH
Q 004673 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (738)
Q Consensus 6 lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s 85 (738)
+..+.+..-.++.++......+.+|.+++.|+++..+.+++..+++.||.+++++.|++.+|+|+|+.+++|+.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34555666777788888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH---hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh------
Q 004673 86 LVML---WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL------ 156 (738)
Q Consensus 86 ~~~a---fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~------ 156 (738)
+++. ...+|..++++-|+.|.|.+...+.+..++....|++.-.+.+++.|.+.++|+++++.++..+...
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 9995 5678999999999999999999999999999999998889999999999999999998777665541
Q ss_pred -----------ccchhHHHHHHHHHHHHHHH
Q 004673 157 -----------ASPSWRLMLGVLSIPALLYF 176 (738)
Q Consensus 157 -----------~~~~Wr~~~~I~ail~~~~~ 176 (738)
+...||.+|.+.+.+.++..
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~ 203 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLA 203 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 11247777877777665544
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.84 E-value=9.6e-19 Score=196.43 Aligned_cols=175 Identities=16% Similarity=0.201 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhH-HHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTV-EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~-iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~ 86 (738)
++++.+|++.. -+...+.+.|++.+++|+++++ .|.+.++++.+|++..++.|+++||+|.|+++.++++.+++.++
T Consensus 30 ~~lC~fGF~~e--~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~ 107 (511)
T TIGR00806 30 LYLCFYGFMAQ--FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWL 107 (511)
T ss_pred HHHHHHHHHHH--hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 33444455444 3677788899999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHH
Q 004673 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (738)
Q Consensus 87 ~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~ 166 (738)
+.++++++..+.+.|++.|++.|..+ +...++..|+|+++|+++.++..++..+|.++++++... ....|||..+.
T Consensus 108 L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql---l~s~gWr~y~~ 183 (511)
T TIGR00806 108 LLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL---LVTLGWISYST 183 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCchhHHH
Confidence 99999999999999999999999999 999999999999999999999999999999999766655 23458887654
Q ss_pred HH--HHHHHHHHHHHhhcccCCch
Q 004673 167 VL--SIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 167 I~--ail~~~~~~~i~~flpESp~ 188 (738)
.. .+.+....+++.+++|..+|
T Consensus 184 Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCch
Confidence 43 22333334455678886544
No 95
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.82 E-value=3.2e-19 Score=194.06 Aligned_cols=151 Identities=21% Similarity=0.241 Sum_probs=139.7
Q ss_pred HhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 004673 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVT 113 (738)
Q Consensus 34 ~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~ 113 (738)
.+.+-+++++|++.++..+...+.+++.|.+.||+|+|..+++|+.++.++++++++.++|++++++|.+||+|.++..+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 34566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCcch-hhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 114 LVPLYISETAPSEI-RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 114 ~~~a~IaE~~P~k~-Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
+..+++++.+|.+. |++++|+.-.+.++|..+| +.++..+++..|.+.+|++.++++++-.++.++.++.+
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvg--PpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVG--PPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceec--CCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 99999999999765 7999999999999999999 66677778888999999999999999888777777654
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.82 E-value=6.8e-17 Score=183.48 Aligned_cols=173 Identities=13% Similarity=0.112 Sum_probs=134.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHh----hhCChHHHHHH-HHHHHHHHHHHH
Q 004673 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRPMLILS-SVLYFVSGLVML 89 (738)
Q Consensus 15 ~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsD----RfGRR~~Llig-lvI~aI~s~~~a 89 (738)
.+-..+..+.....++.+.+++|++....+++..+..+...+.+++.|+++| |+||||.++++ .+..+++.++.+
T Consensus 13 ~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~ 92 (477)
T TIGR01301 13 AAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG 92 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3333445555566677788899999999999999999999999999999999 59999988774 666667777777
Q ss_pred hhhhHH-----------------HHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchh--hhhchHhHHHhhhhhHhhHHHH
Q 004673 90 WSPNVY-----------------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIR--GRLNTLPQFTGSGGMFLAYCMV 150 (738)
Q Consensus 90 fa~~~~-----------------~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~R--g~~~~~~~~~~~~G~~I~~~~~ 150 (738)
+++++. .++++-.+..++.+...++..++++|.+|+++| +.++++.+.+..+|.++|+..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g 172 (477)
T TIGR01301 93 FAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAG 172 (477)
T ss_pred hCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776643 223333344557888888899999999998865 6899999999999999998877
Q ss_pred HHHHHhcc-------------chhHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 151 FGMSLLAS-------------PSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 151 ~~l~l~~~-------------~~Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
........ .+.|..|++.+++.++..++..++++|.|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 173 AYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 55321111 26799999988888888888888899875
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.82 E-value=5e-17 Score=185.51 Aligned_cols=163 Identities=14% Similarity=0.174 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHhHHHHHHHH-HHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh-hCChHHHHHHHHHHHHHHHH
Q 004673 10 AATIGNFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~l-p~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR-fGRR~~LliglvI~aI~s~~ 87 (738)
.+++..+........+...+ .++.+++|++.++.+++.+.+........+++|+++|| +|||++++++.++++++.++
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 34444444444444444433 46778999999999998888877766667889999999 59999999999999999999
Q ss_pred HHhhh-hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcch--hhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHH
Q 004673 88 MLWSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI--RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (738)
Q Consensus 88 ~afa~-~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~--Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~ 164 (738)
++++. +.+.+.++|++.|+|.|...+...+++.|++|+++ |+.+.++.+.+.++|.++++.+.. ...+..|||+.
T Consensus 105 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g--~l~~~~g~~~~ 182 (500)
T PRK09584 105 VAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP--WLAAKYGWSVA 182 (500)
T ss_pred HHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHH--HHHHhhCHHHH
Confidence 98874 56677788999999999998999999999998643 456888889999999999965554 34566799999
Q ss_pred HHHHHHHHHH
Q 004673 165 LGVLSIPALL 174 (738)
Q Consensus 165 ~~I~ail~~~ 174 (738)
|++.++..++
T Consensus 183 F~i~~i~~~i 192 (500)
T PRK09584 183 FALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHH
Confidence 9988754444
No 98
>PRK09669 putative symporter YagG; Provisional
Probab=99.81 E-value=2.4e-17 Score=183.87 Aligned_cols=174 Identities=13% Similarity=0.177 Sum_probs=125.7
Q ss_pred HHHHHHHHhHHHHHH-HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh----hCC-hHHHHHHHHHHHHHHH
Q 004673 13 IGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGR-RPMLILSSVLYFVSGL 86 (738)
Q Consensus 13 L~~~~~g~~~~~~~~-~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR----fGR-R~~LliglvI~aI~s~ 86 (738)
++.+..+.....++. ...++.+.+|++...+|++.++..+..++..++.|+++|| +|| |+.++++.+..+++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 333333333334443 4456888899999999999999999999999999999998 777 5666678788777776
Q ss_pred HHHhhhh------HHHHHHHHHHHHHHHhhhhhhHHHHHhhcC-CcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh---
Q 004673 87 VMLWSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL--- 156 (738)
Q Consensus 87 ~~afa~~------~~~liI~r~l~G~g~G~~~~~~~a~IaE~~-P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~--- 156 (738)
+....++ +..+++..++.+++......+..++.+|+. ++++|+++.++-..+..+|..+++.+.......
T Consensus 96 l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~ 175 (444)
T PRK09669 96 LTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK 175 (444)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6554432 455666677777776677777789999988 568899999998888888888776544322211
Q ss_pred --ccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 157 --ASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 157 --~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
...+|+..+.+.++++++.+++.++..+|.
T Consensus 176 ~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 176 GDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 134899999988888877665555555543
No 99
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.79 E-value=1.7e-16 Score=171.59 Aligned_cols=171 Identities=21% Similarity=0.301 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH
Q 004673 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (738)
Q Consensus 5 ~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~ 84 (738)
++.+..+.+..+-.--..+.++|.++.+++++|+|.+..|+++++..+..+..+++..+++.|+|.++.+..++++.++|
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44555555555555667788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHH
Q 004673 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (738)
Q Consensus 85 s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~ 164 (738)
.++-... +.+.|+.+-.+.|.|.+...+..+.+|-+.||++ -+..++++.+...+|.++++.......... .+||..
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~-~gW~~a 167 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHS-GGWRGA 167 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-ccHHHH
Confidence 9998887 8888999999999999999999999999999976 799999999999999999966655554333 489999
Q ss_pred HHHHHHHHHHHHHH
Q 004673 165 LGVLSIPALLYFAF 178 (738)
Q Consensus 165 ~~I~ail~~~~~~~ 178 (738)
+.+.+.++++.++.
T Consensus 168 L~~WAl~allAl~~ 181 (395)
T COG2807 168 LGFWALLALLALLI 181 (395)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887644
No 100
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=1.1e-17 Score=181.36 Aligned_cols=150 Identities=21% Similarity=0.163 Sum_probs=120.5
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhH
Q 004673 36 LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLV 115 (738)
Q Consensus 36 fGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~ 115 (738)
.+.+....|.+.+.|.++..+.++.+|.++||+|||+++++|.+..++..++.++++|+..++++|++.|+.-|.. .+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~ 141 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVI 141 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHH
Confidence 3445677899999999999999999999999999999999999999999999999999977777799999998766 678
Q ss_pred HHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHH-h--ccch-hHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 116 PLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL-L--ASPS-WRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 116 ~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l-~--~~~~-Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
.++++|.+++++|+++++.+.+.+++|.++||.++..+.. . ...- .-.+.++..+.+.....+..+++|||
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 8999999999999999999999999999999888877655 1 1111 11122222233333233456778888
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.78 E-value=5.4e-16 Score=175.11 Aligned_cols=175 Identities=13% Similarity=0.150 Sum_probs=125.9
Q ss_pred HHHHHHHHHhHHHHHHHH-HHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHh----hhCC-hHHHHHHHHHHHHHH
Q 004673 12 TIGNFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGR-RPMLILSSVLYFVSG 85 (738)
Q Consensus 12 ~L~~~~~g~~~~~~~~~l-p~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsD----RfGR-R~~LliglvI~aI~s 85 (738)
.+|.+......+.+...+ .++.+.+|++...+|.+..+..+.-++..++.|+++| |+|| |+.++++.+..+++.
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 455555555556666644 4566778999999999999999999999999999999 6698 667777888888876
Q ss_pred HHHHhhh------hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcC-CcchhhhhchHhHHHhhhhhHhhHHHHHHHHH---
Q 004673 86 LVMLWSP------NVYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL--- 155 (738)
Q Consensus 86 ~~~afa~------~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~-P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l--- 155 (738)
+++...+ .+..+++.-++.+++.....++..+++.|.. ++++|.++.++-..+.++|..+.+........
T Consensus 92 ~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 92 FLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6664432 1345556667778888888888889999998 68999999998777777775555333222111
Q ss_pred --hccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 156 --LASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 156 --~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
....+|+....+.+++.++..++.++..+|.
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 1123688888777777776565655556654
No 102
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=3e-15 Score=166.82 Aligned_cols=174 Identities=21% Similarity=0.231 Sum_probs=128.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhC-ChHHHHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-RRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfG-RR~~LliglvI~aI~s~~~a 89 (738)
++.-+|++....+.+.|.++..-++.|+|..++|++.++..+...++++++|.++||++ +|+.+.+..++.++..++..
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34556666777788888888899999999999999999999999999999999999987 58888888888888887888
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHH--HHhccchhHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM--SLLASPSWRLMLGV 167 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l--~l~~~~~Wr~~~~I 167 (738)
+.++++.+++.-++..+......|..-++..+... +++.-.+-.-..+++|.+++....... ...+..+....+++
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 88899988888888888888888888888888776 345556666777888887774431111 11111223345555
Q ss_pred HHHHHHHHHHHHhhcccCCc
Q 004673 168 LSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 168 ~ail~~~~~~~i~~flpESp 187 (738)
.++.+++.. ...+.+|+.|
T Consensus 165 ~~~~~~ll~-~~~l~lp~~~ 183 (400)
T PF03825_consen 165 AAILSLLLA-GFALFLPKTP 183 (400)
T ss_pred HHHHHHHHH-HHHHhCCCCc
Confidence 555544433 2245567664
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.77 E-value=3.7e-16 Score=177.04 Aligned_cols=173 Identities=18% Similarity=0.115 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHhHHHHHH-HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhC-----ChHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLILSSVLY 81 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~-~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfG-----RR~~LliglvI~ 81 (738)
+.++...++.+|.. ..... ..+.+.+++|++.++++.+.++..+...+-.+ +|.++||++ ||+.++++.++.
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 34455567788887 44444 45567778999999999999999999998666 999999998 788888887776
Q ss_pred H-HHHHHHHhhhhHHHHH-HHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHH---hhhhhHhhHHHHHHHHHh
Q 004673 82 F-VSGLVMLWSPNVYVLC-IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFT---GSGGMFLAYCMVFGMSLL 156 (738)
Q Consensus 82 a-I~s~~~afa~~~~~li-I~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~---~~~G~~I~~~~~~~l~l~ 156 (738)
+ ++....+..++...+. +.+++.+++.+...++.-+++.|..+ +++....++.... .++|.++++.++. ...
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G--~l~ 182 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGG--PLL 182 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHH--HHH
Confidence 3 4433344445544444 47999999999999999999999998 5554444443333 3478888755543 345
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 157 ASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 157 ~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
+..+||..|++.+++.++. .+..++++|.
T Consensus 183 ~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~ 211 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQ-LFVSNLSKER 211 (468)
T ss_pred HhcCcchHHHHHHHHHHHH-HHHHHhcccc
Confidence 5669999999998888776 3446677775
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.73 E-value=8.7e-16 Score=170.63 Aligned_cols=159 Identities=22% Similarity=0.323 Sum_probs=126.7
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHh----hhCChH-HHHHHHHHHHHHHHHHHhh-h-------h
Q 004673 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRP-MLILSSVLYFVSGLVMLWS-P-------N 93 (738)
Q Consensus 27 ~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsD----RfGRR~-~LliglvI~aI~s~~~afa-~-------~ 93 (738)
...+++.+.+|+++...|++..+..+-.++..++.|.++| |+|||| .+++|.++.+++.+++... + .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 3456777888999999999999999999999999999999 899655 5667888888888877765 4 2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCC-cchhhhhchHhHHHhhhhhHhhHHHHHHHHH-hc---c-chhHHHHHH
Q 004673 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL-LA---S-PSWRLMLGV 167 (738)
Q Consensus 94 ~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P-~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l-~~---~-~~Wr~~~~I 167 (738)
...+.+.-++..++......+..+++.|..+ +++|.+..+.-..+..+|.++.......... .. . .+|+++..+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3445677777789988888889999999997 5789999999999999988755444433321 11 1 279999999
Q ss_pred HHHHHHHHHHHHhhcccC
Q 004673 168 LSIPALLYFAFAVFFLPE 185 (738)
Q Consensus 168 ~ail~~~~~~~i~~flpE 185 (738)
.++++++..++..+..+|
T Consensus 183 ~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHhhhhhheeee
Confidence 999998888777777777
No 105
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.73 E-value=4.4e-14 Score=160.90 Aligned_cols=177 Identities=14% Similarity=0.141 Sum_probs=119.0
Q ss_pred hhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchh--HHHHHHHHHHHH-HH
Q 004673 530 FSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR--KLLLTTIPVLIV-SL 606 (738)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr--~~l~~~~~~~~v-~~ 606 (738)
-.+.+.+..+...+..+ .+|++..+. ..+.++..+..++|+++.+++.||+|.| +.++++..+..+ .+
T Consensus 294 ~dg~~ti~~~~~i~a~~--------~lg~s~~~l-~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 294 SDGVNTIISFAGIYATE--------VLGMSTTQL-IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHHHHHHHHHHH--------hcCcCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 34566666666666654 577776554 4445667899999999999999999998 777776655532 22
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHH
Q 004673 607 IILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 686 (738)
Q Consensus 607 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~ 686 (738)
..+.-..... .. ....+.. ..+.+..+.+..+..+..-.+.+|+.|++..+.-+|+..+......+++|.+.+.+.+
T Consensus 365 ~g~~G~~~~~-~g-~~~~~~f-~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~ 441 (477)
T PF11700_consen 365 YGLFGFWPSF-FG-LKSPWEF-WVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD 441 (477)
T ss_pred HHHHHhhhcc-cC-cccHHHH-HHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222110000 01 1112222 2222333334444455566888999999999999999999999999999999999999
Q ss_pred hhc-chhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004673 687 SIG-LAGAFGVYAVVCFISWVFVFLRVPETKGMP 719 (738)
Q Consensus 687 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 719 (738)
..| .+..+....++.+++.++. .+++..|++.
T Consensus 442 ~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~~ 474 (477)
T PF11700_consen 442 ATGSQRYGFLFLLVLFLIGLILL-FFVDVEKGRE 474 (477)
T ss_pred HhCCchhHHHHHHHHHHHHHHHH-hhccchhhhh
Confidence 987 6777776666666665554 5677777653
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.73 E-value=8.6e-15 Score=163.48 Aligned_cols=130 Identities=12% Similarity=0.142 Sum_probs=88.5
Q ss_pred HHHHHHHHhHHHHHHH-HHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhh----CChHHH-HHHHHHHHHHHH
Q 004673 13 IGNFLQGWDNATIAGA-IVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL----GRRPML-ILSSVLYFVSGL 86 (738)
Q Consensus 13 L~~~~~g~~~~~~~~~-lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf----GRR~~L-liglvI~aI~s~ 86 (738)
++.+........+.+. .+++.+.+|++..++|++.++..+..++..++.|+++||. ||||.+ +++.+...+.++
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 4444444444444443 3567777899999999999999999999999999999996 766644 556555554444
Q ss_pred HH-Hhh----h--hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCC-cchhhhhchHhHHHhhhh
Q 004673 87 VM-LWS----P--NVYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGG 142 (738)
Q Consensus 87 ~~-afa----~--~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P-~k~Rg~~~~~~~~~~~~G 142 (738)
+. ... . ....+++.-++.+++.+...++..++..+... +++|.+..++-..+.++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~ 158 (448)
T PRK09848 95 LVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLT 158 (448)
T ss_pred HHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 43 221 1 22334445667788888888777777777664 467888877766554443
No 107
>PRK11462 putative transporter; Provisional
Probab=99.72 E-value=1.9e-14 Score=162.66 Aligned_cols=174 Identities=13% Similarity=0.159 Sum_probs=125.8
Q ss_pred HHHHHHHHhHHHHHH-HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh----hCCh-HHHHHHHHHHHHHHH
Q 004673 13 IGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRR-PMLILSSVLYFVSGL 86 (738)
Q Consensus 13 L~~~~~g~~~~~~~~-~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR----fGRR-~~LliglvI~aI~s~ 86 (738)
+|.+..+.....++. ...++.+.+|+++..+|++..+.-+.-++.-|+.|.++|| +||| +.++++.+..+++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 344444444444444 3445777889999999999999999999999999999995 7875 556677788888877
Q ss_pred HHHhhhh------HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCC-cchhhhhchHhHHHhhhhhHhhHHHHHHHHHhc--
Q 004673 87 VMLWSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-- 157 (738)
Q Consensus 87 ~~afa~~------~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P-~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~-- 157 (738)
++...++ ...+.+.-++..++......+..++..|..+ +++|.++.++-..+..+|..+++..........
T Consensus 96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~ 175 (460)
T PRK11462 96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG 175 (460)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6654442 3445556666788888888888899999887 788999999999999998877765543332211
Q ss_pred ---cchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 158 ---SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 158 ---~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
..+|+....+.++++++...+.++..+|.
T Consensus 176 ~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 176 DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 13788888887777766555545555553
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.70 E-value=1.2e-13 Score=157.63 Aligned_cols=156 Identities=15% Similarity=0.144 Sum_probs=120.7
Q ss_pred HHHHhHHHHHHHHH-HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhh-h
Q 004673 17 LQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSP-N 93 (738)
Q Consensus 17 ~~g~~~~~~~~~lp-~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf-GRR~~LliglvI~aI~s~~~afa~-~ 93 (738)
........+...+| ++.+++|+++.+.+.+.+.+.+...++.+++|+++||+ |||++++++.++.+++.++.++.. +
T Consensus 20 ~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~ 99 (493)
T PRK15462 20 WEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIH 99 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33333333333444 46678999999999999999999999999999999999 999999999999999988776543 2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcc--hhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHH
Q 004673 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAPSE--IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIP 171 (738)
Q Consensus 94 ~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k--~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail 171 (738)
...+.++..+.++|.|...+...++++|.+|++ +|..+.++.+.+.++|..+++.+.. ...+..|||+.|.+.++.
T Consensus 100 ~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g--~L~~~~Gw~~~F~iaaig 177 (493)
T PRK15462 100 PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG--YAQEEYSWAMGFGLAAVG 177 (493)
T ss_pred hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH--HHHhhhChHHHHHHHHHH
Confidence 233444444555667777777789999999975 6899999999999999999965554 445566999999987654
Q ss_pred HHH
Q 004673 172 ALL 174 (738)
Q Consensus 172 ~~~ 174 (738)
.++
T Consensus 178 m~l 180 (493)
T PRK15462 178 MIA 180 (493)
T ss_pred HHH
Confidence 433
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.64 E-value=2.8e-13 Score=150.99 Aligned_cols=142 Identities=12% Similarity=0.090 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcc
Q 004673 566 LISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPI 645 (738)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (738)
....+..+..++.-.++.++.+|+|.|+.++++..++++=.++..+..... .....-++...-+.....++
T Consensus 263 ~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~---------~i~~~klLH~~e~~l~lva~ 333 (412)
T PF01306_consen 263 YLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPW---------VISLIKLLHALEFPLLLVAA 333 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHH---------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchH---------HHHHHHHHHHHHHHHHHHHH
Confidence 334557788888889999999999999999999999888888777654433 23333333333333333333
Q ss_pred hhhhhcccCcccchhhhhHHH-HHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCC
Q 004673 646 PNILCAEIFPTKVRGICIAIC-AMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 717 (738)
Q Consensus 646 ~~~~~~e~~p~~~r~~~~gi~-~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 717 (738)
. -|+++.+|+|..++...+. +...+++.++.+.+.|.+.+.+|++.+|++.+++.+...++.++.+++.+.
T Consensus 334 f-kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 334 F-KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp H-HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred H-HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 3 7789999999999999886 788999999999999999999999999999999988888888887765544
No 110
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.62 E-value=6.5e-13 Score=149.70 Aligned_cols=176 Identities=17% Similarity=0.277 Sum_probs=137.7
Q ss_pred HHHHHHHHHhHHHHHHHHH-HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh----hCC-hHHHHHHHHHHHHHH
Q 004673 12 TIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGR-RPMLILSSVLYFVSG 85 (738)
Q Consensus 12 ~L~~~~~g~~~~~~~~~lp-~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR----fGR-R~~LliglvI~aI~s 85 (738)
.++.+............+. ++.+.+|+++..+|.+..+.-+--++.-|+.|.++|| +|| |+.++++.+..++.+
T Consensus 18 g~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~ 97 (467)
T COG2211 18 GLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVA 97 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHH
Confidence 3455555555555555555 4666789999999999999999999999999999995 776 667788889899988
Q ss_pred HHHHhhhh------HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCC-cchhhhhchHhHHHhhhhhHhhHHHHHHHH-Hhc
Q 004673 86 LVMLWSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMS-LLA 157 (738)
Q Consensus 86 ~~~afa~~------~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P-~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~-l~~ 157 (738)
+++-.+++ ....++.-.+.+++......+..++.+|+.+ +++|.+..+.-+.+.++|.++.......+. ...
T Consensus 98 ~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g 177 (467)
T COG2211 98 VLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG 177 (467)
T ss_pred HHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88887663 4555667888889888888888899999875 688999999999999999777655443332 221
Q ss_pred ----cchhHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 158 ----SPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 158 ----~~~Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
..||+.+-++.++++++.++++++.++|.+
T Consensus 178 ~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 178 GGDKALGYQGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 348999999999999888888888887763
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.60 E-value=1.8e-13 Score=151.67 Aligned_cols=185 Identities=16% Similarity=0.177 Sum_probs=152.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~ 81 (738)
.++|+++++.++-++.+++..-.+++...+....|| +....-|+..+|.+.+....+++-|+.|++|-|..++++.++.
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLN 119 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHH
Confidence 478999999999999998888888888888888999 7778889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh------hhHH--HHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHH
Q 004673 82 FVSGLVMLWS------PNVY--VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 82 aI~s~~~afa------~~~~--~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l 153 (738)
.+|+.+-..+ +.++ ..+.+..+.+.+.-..+........-|||+++|..|.++-.++..+|.+++.++....
T Consensus 120 ~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 120 GIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred HHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 9999988775 3444 6778889999988887777677888899999999999999999889999887766655
Q ss_pred HHhc----cchhHH--HHHHHHHHHHHHHHHHhhcccCCc
Q 004673 154 SLLA----SPSWRL--MLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 154 ~l~~----~~~Wr~--~~~I~ail~~~~~~~i~~flpESp 187 (738)
.... ...|-. +|+..++++.+.+++..+..++.|
T Consensus 200 V~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P 239 (480)
T KOG2563|consen 200 VPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKP 239 (480)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4333 446766 566666666665666666666655
No 112
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.58 E-value=2.6e-13 Score=153.96 Aligned_cols=185 Identities=16% Similarity=0.149 Sum_probs=134.8
Q ss_pred HHHHHHHHHH-HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH---HHhhhhHHHH
Q 004673 22 NATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV---MLWSPNVYVL 97 (738)
Q Consensus 22 ~~~~~~~lp~-L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~---~afa~~~~~l 97 (738)
...+...+|. +.+.+|++..+.+++.+...++..++.++.|+++||+|||+++.++.++..++.+. ...+++...+
T Consensus 266 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (490)
T PRK10642 266 YYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLI 345 (490)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 3334445565 44678999888888888899999999999999999999999988887654443332 2234567788
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 004673 98 CIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 98 iI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~ 177 (738)
+++|++.|++.+........++.|.+|++.||++.++......++..+++....... ....+|+.++++..+++++.++
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~-~~~~~~~~~~~~~~~~~~i~~~ 424 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLV-ESTQNLMMPAYYLMVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCchHHHHHHHHHHHHHHH
Confidence 889999999888777778888999999999999998743333444444433322221 1123578777777766666554
Q ss_pred HHhhcccCCchhhhcc-----CcchHHHHHHHHhhc
Q 004673 178 FAVFFLPESPRWLVSK-----GKMLEAKQVLQRLRG 208 (738)
Q Consensus 178 ~i~~flpESp~~~~~~-----~~~~~a~~~~~~~~~ 208 (738)
..+++||+|+|+.++ +|.+|+++.++++++
T Consensus 425 -~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 425 -TGVTMKETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred -HHHHhccccCCCCCCccccccchhhHHHHhhcccc
Confidence 456679999998765 889999999998873
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.54 E-value=7.1e-12 Score=138.52 Aligned_cols=147 Identities=14% Similarity=0.161 Sum_probs=111.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHhhhCC-hHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHhhhhhhHH
Q 004673 41 TVEGLVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSVLYFVSGLVMLWSPN---VYVLCIARLLDGFGVGLAVTLVP 116 (738)
Q Consensus 41 s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGR-R~~LliglvI~aI~s~~~afa~~---~~~liI~r~l~G~g~G~~~~~~~ 116 (738)
+..+...++..+..++..++.|.++|..|+ |+.+.....+..+++++..+.++ ++.+++.-.+..++.....+...
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 677788888999999999999999999995 55666777777777777777654 45555668888888888889999
Q ss_pred HHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHH-h---------------ccchhHHHHHHHHHHHHHHHHHHh
Q 004673 117 LYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL-L---------------ASPSWRLMLGVLSIPALLYFAFAV 180 (738)
Q Consensus 117 a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l-~---------------~~~~Wr~~~~I~ail~~~~~~~i~ 180 (738)
+++.+..++++-++..++-.....+|..+..+....... . +...=|..+.+.++..++..+-.+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 999999999999999888777788887776544433221 1 334577788887777776665556
Q ss_pred hcccCCc
Q 004673 181 FFLPESP 187 (738)
Q Consensus 181 ~flpESp 187 (738)
+.+|+.+
T Consensus 218 ~~v~~~~ 224 (438)
T COG2270 218 LNVHDAE 224 (438)
T ss_pred hcccccc
Confidence 6666654
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.53 E-value=3.1e-12 Score=137.59 Aligned_cols=153 Identities=12% Similarity=0.057 Sum_probs=100.2
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 004673 524 IQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLI 603 (738)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~ 603 (738)
+.++.....-.++..|.+.++.+.. .+|+++...+... .....++.+|++++++++||+|+|+.+.++..+.+
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~------~~g~s~~~a~~~~-s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPH------ALGLPEDQAAHFT-AYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc------cCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3333344345566778888886521 2567766666665 55678899999999999999999998888777666
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHH
Q 004673 604 VSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPV 683 (738)
Q Consensus 604 v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~ 683 (738)
++.+++.... . ......+++.+++.+ ...|.......+.+|.+ .+.+.++. ....+|+++.|.+.|.
T Consensus 220 ~~~~l~~~~~--~--------~~~~~~~~l~g~~~s-~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~ 286 (310)
T TIGR01272 220 LLSIGAALTH--G--------YVAMWFVLALGLFNS-IMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGS 286 (310)
T ss_pred HHHHHHHHcC--C--------HHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHH
Confidence 6654443321 1 112223333333333 33444446666777765 45666775 5677999999999999
Q ss_pred HHHhhcchhHHHH
Q 004673 684 MLSSIGLAGAFGV 696 (738)
Q Consensus 684 ~~~~~g~~~~~~~ 696 (738)
+.+..|.+.+|++
T Consensus 287 lad~~g~~~a~~v 299 (310)
T TIGR01272 287 LADCLGIQLAFAL 299 (310)
T ss_pred HHHhccchHHHHH
Confidence 9999998877763
No 115
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.51 E-value=8e-14 Score=146.34 Aligned_cols=144 Identities=14% Similarity=0.059 Sum_probs=116.7
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh-hCChHHHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLY 81 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR-fGRR~~LliglvI~ 81 (738)
++...++..++-.|-.++....-+....++..+.++..++..++-+.|..-..+.++++|++.|| +|-|..-.+-..+.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 34555666666666666666665566677888888888999999999999999999999999996 57777666666666
Q ss_pred HHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhh
Q 004673 82 FVSGLVMLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (738)
Q Consensus 82 aI~s~~~af---a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~ 146 (738)
.+|-++++. .+.+|.+.++||+.|+|.-...++..+|+.-||..|+-+.++++..+..-+|...-
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvN 188 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVN 188 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceee
Confidence 677777664 78999999999999999877778888999999999999999999888888887654
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.47 E-value=4.2e-13 Score=122.03 Aligned_cols=138 Identities=30% Similarity=0.417 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcc
Q 004673 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (738)
Q Consensus 47 ~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k 126 (738)
.+.+.++..++.++.|++.||+|||+.+.++..+..++.++..+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 127 IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 127 ~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
+|++.+++.+....+|..+++..... ..+..+|++.+.+.++++++..++.+++.||+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGV--LAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHH--HhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999655443 35667899999999888887776666666653
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.44 E-value=1.3e-11 Score=144.77 Aligned_cols=180 Identities=17% Similarity=0.194 Sum_probs=153.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHH
Q 004673 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (738)
Q Consensus 6 lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s 85 (738)
..+.++++..+.+++..+.+...+..+.+.|+++.++.|++.+.+=+|..+...+..+..-|.-|-+++.+|.+++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 45666788888888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh--------------------h------------------------------h-H-HHHHHHHHHHHHHHhhhhh
Q 004673 86 LVMLWS--------------------P------------------------------N-V-YVLCIARLLDGFGVGLAVT 113 (738)
Q Consensus 86 ~~~afa--------------------~------------------------------~-~-~~liI~r~l~G~g~G~~~~ 113 (738)
+++++- + + . ..++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 999861 0 0 2 2566679999999999999
Q ss_pred hHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh--cc---------------chhHHHHHHHHHHHHHHH
Q 004673 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL--AS---------------PSWRLMLGVLSIPALLYF 176 (738)
Q Consensus 114 ~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~--~~---------------~~Wr~~~~I~ail~~~~~ 176 (738)
.+.+|+-|...+++-...+++..+...+|.++|++++...... +. ..|..-|++.+++.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998887765422 11 148888999998888866
Q ss_pred HHHhhcccCC
Q 004673 177 AFAVFFLPES 186 (738)
Q Consensus 177 ~~i~~flpES 186 (738)
+. +|+.|..
T Consensus 337 ~p-~f~fPk~ 345 (735)
T KOG3626|consen 337 VP-LFFFPKE 345 (735)
T ss_pred HH-HHhCccc
Confidence 55 4455443
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.37 E-value=5.5e-12 Score=142.73 Aligned_cols=185 Identities=23% Similarity=0.303 Sum_probs=151.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHH-hhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCC-hHHHHHHHH
Q 004673 3 GAALVAIAATIGNFLQGWDNATIAGAI-VYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSV 79 (738)
Q Consensus 3 ~~~lillil~L~~~~~g~~~~~~~~~l-p~L~~-dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGR-R~~Lliglv 79 (738)
..|..+.+..+..++.....+++.+.. |++++ |.+.+.+..|++.++..+|.+++.+++|+...|.+. |+.++.+.+
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 356777778888888888888777644 55555 588889999999999999999999999999999996 888999999
Q ss_pred HHHHHHHHH-Hh---hh-hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHH
Q 004673 80 LYFVSGLVM-LW---SP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS 154 (738)
Q Consensus 80 I~aI~s~~~-af---a~-~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~ 154 (738)
+.++|.++. ++ .+ ..+.++++|++.|+|.|.. ....+|+++....++|.++.+....+..+|.++|+.+...+.
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 999999999 43 23 6799999999999998866 677899999888888999999988888999999977776655
Q ss_pred Hhccch-----------hHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 155 LLASPS-----------WRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 155 l~~~~~-----------Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
.....| +-.+-++.++++++.+++..++.+|.+|
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 433222 3446678888888888888888888743
No 119
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.35 E-value=6.9e-11 Score=131.92 Aligned_cols=162 Identities=12% Similarity=0.095 Sum_probs=132.2
Q ss_pred HHHHHHHHHHhhCCCh--------hHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh----
Q 004673 25 IAGAIVYIKKDLNLGT--------TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP---- 92 (738)
Q Consensus 25 ~~~~lp~L~~dfGlS~--------s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~---- 92 (738)
.....+...++.|.++ ...+.+.++..++..++.++.|+++||+|+|+++.++.++.+++.++.....
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~ 306 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYF 306 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence 3344455556666443 6679999999999999999999999999999999999999999877776632
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhH-HHhhhhhHhhHHHHHHHHHhcc----chhHHHHHH
Q 004673 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLAS----PSWRLMLGV 167 (738)
Q Consensus 93 ~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~-~~~~~G~~I~~~~~~~l~l~~~----~~Wr~~~~I 167 (738)
+++.+++.+++.|++.+...+....++.|++|+++||++.++.+ +..++|.++|+.+......... .||+.+|.+
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~ 386 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLF 386 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 35677788999999999988888999999999999999999997 6788999999666544432211 479999999
Q ss_pred HHHHHHHHHHHHhhcccCC
Q 004673 168 LSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 168 ~ail~~~~~~~i~~flpES 186 (738)
.++++++..++.++++||+
T Consensus 387 ~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 387 FAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHhCCc
Confidence 9998888888888888887
No 120
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.35 E-value=6.7e-11 Score=123.85 Aligned_cols=165 Identities=27% Similarity=0.347 Sum_probs=142.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChH-HHHHHHHHHHHHHHHHH
Q 004673 12 TIGNFLQGWDNATIAGAIVYIKKDL-NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRP-MLILSSVLYFVSGLVML 89 (738)
Q Consensus 12 ~L~~~~~g~~~~~~~~~lp~L~~df-GlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~-~LliglvI~aI~s~~~a 89 (738)
.+..++............|.+.++. +.++.+.+++.+...++..++.++.+++.||+|||+ .+.++.++..++.++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 181 ALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 3344445555555666667666654 999999999999999999999999999999999999 99999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHH
Q 004673 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (738)
Q Consensus 90 fa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~a 169 (738)
+.++.+.+++..++.|++.+...+...+++.|.+|+++|++..++.+....+|..+++... ....+..+|+..+.+.+
T Consensus 261 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~--g~l~~~~~~~~~~~~~~ 338 (352)
T cd06174 261 LAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLA--GLLLDTGGYGGVFLILA 338 (352)
T ss_pred HhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcccCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999985444 44455679999999999
Q ss_pred HHHHHHHHH
Q 004673 170 IPALLYFAF 178 (738)
Q Consensus 170 il~~~~~~~ 178 (738)
+++++..++
T Consensus 339 ~~~~i~~i~ 347 (352)
T cd06174 339 ALALLAALL 347 (352)
T ss_pred HHHHHHHHH
Confidence 988876654
No 121
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.34 E-value=9.6e-14 Score=160.28 Aligned_cols=180 Identities=16% Similarity=0.168 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
++.+++..+++....+.+...+..+.+.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+.+|.+++++|+++
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHH
Confidence 34455666666777777888889999999999999999999999999999999999999988989999999999999999
Q ss_pred HHhh------------h--------------------------------------hHHHHHHHHHHHHHHHhhhhhhHHH
Q 004673 88 MLWS------------P--------------------------------------NVYVLCIARLLDGFGVGLAVTLVPL 117 (738)
Q Consensus 88 ~afa------------~--------------------------------------~~~~liI~r~l~G~g~G~~~~~~~a 117 (738)
+++. . -++.++++.++.|+|....++.+.+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 8751 0 1357778899999999999999999
Q ss_pred HHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHh-------c----c---------chhHHHHHHHHHHHHHHHH
Q 004673 118 YISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL-------A----S---------PSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 118 ~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~-------~----~---------~~Wr~~~~I~ail~~~~~~ 177 (738)
|+-|.+++++-+...++..+...+|.++|++++...... + . ..|-.-|++.+++.++..+
T Consensus 165 YiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 165 YIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998877654321 0 0 1377778888887776555
Q ss_pred HHhhcccCCc
Q 004673 178 FAVFFLPESP 187 (738)
Q Consensus 178 ~i~~flpESp 187 (738)
..++|-++-|
T Consensus 245 pl~~FPk~lp 254 (539)
T PF03137_consen 245 PLFFFPKKLP 254 (539)
T ss_dssp ----------
T ss_pred HHHcCCccCC
Confidence 4333333333
No 122
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.34 E-value=2.8e-11 Score=133.88 Aligned_cols=150 Identities=19% Similarity=0.201 Sum_probs=127.7
Q ss_pred hhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhh
Q 004673 35 DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTL 114 (738)
Q Consensus 35 dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~ 114 (738)
+.+.+..+.+++.++..++..++.+++|+++||+|+|+++.++.++.+++.++.++++|.+.+++.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34667788899999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHhhcCCcchhhhhchH-hHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 115 VPLYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 115 ~~a~IaE~~P~k~Rg~~~~~-~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
...++.+.+|++.|+...+. .++...+|.++++.+. ....+..|||.+|.+.+++.++..++.++..++.
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~--G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLA--GNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHH--HHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88999999999998887655 5677888998885443 4456667999999999988877666666666655
No 123
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.32 E-value=4.5e-11 Score=128.51 Aligned_cols=170 Identities=16% Similarity=0.152 Sum_probs=124.7
Q ss_pred HhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 004673 529 QFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLII 608 (738)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~ 608 (738)
...+........|.+.++ +|.++...+... ....++.+++.++.|+++||+|||+.+..+..+.+++.+.
T Consensus 17 ~~~~~~~~~~~~p~~~~~---------~g~s~~~~g~~~-~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 86 (385)
T TIGR00710 17 GPLGIDMYLPAFPEIAAD---------LSTPASIVQMTL-TLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG 86 (385)
T ss_pred HHHHHHHhcccHHHHHHH---------hCCCHHHHHHHH-HHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH
Confidence 333444455556666665 455655555554 5567888999999999999999999999998888887776
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhh
Q 004673 609 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 688 (738)
Q Consensus 609 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~ 688 (738)
+....... ...+..++...+.+ ...+....++.|.+|++.|+.+.++.+....++..+++.+.+.+.+..
T Consensus 87 ~~~~~~~~---------~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 156 (385)
T TIGR00710 87 LALSNNIE---------TLLVLRFVQAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL 156 (385)
T ss_pred HHHHccHH---------HHHHHHHHHHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 65542211 22222222222222 233455578899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004673 689 GLAGAFGVYAVVCFISWVFVFLRVPETKGM 718 (738)
Q Consensus 689 g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 718 (738)
||+..|++.++++++..++.++..||++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 157 SWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999988888888877777778876543
No 124
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.32 E-value=2.5e-09 Score=120.76 Aligned_cols=147 Identities=20% Similarity=0.183 Sum_probs=126.4
Q ss_pred HHHHHHHhhC----CChhHHHHHHHHHHHHHHHHHHhHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHH
Q 004673 28 AIVYIKKDLN----LGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIA 100 (738)
Q Consensus 28 ~lp~L~~dfG----lS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf-GRR~~LliglvI~aI~s~~~afa~--~~~~liI~ 100 (738)
.+-++..+++ +++++..-+.+.|..-..+...++|+++||+ |+|+++.+|.+++++|.++.+.+. +...++++
T Consensus 44 L~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~ 123 (498)
T COG3104 44 LILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIG 123 (498)
T ss_pred HHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHH
Confidence 4456667777 9999999999999988899999999999997 999999999999999999999984 78899999
Q ss_pred HHHHHHHHhhhhhhHHHHHhhcCCcc--hhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 004673 101 RLLDGFGVGLAVTLVPLYISETAPSE--IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (738)
Q Consensus 101 r~l~G~g~G~~~~~~~a~IaE~~P~k--~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~ 176 (738)
-.+.++|.|..=+...+++.|.+|++ +|-...+++.++.++|..+++++... .....||...|.+.++-.++.+
T Consensus 124 L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~--~~~~~g~~~gF~~aavGm~~gl 199 (498)
T COG3104 124 LALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGL--LAINYGWHVGFGLAAVGMIIGL 199 (498)
T ss_pred HHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHH--HHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999853 36778999999999999999655544 4566799999988877555544
No 125
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.32 E-value=1.3e-10 Score=138.68 Aligned_cols=139 Identities=16% Similarity=0.030 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcC
Q 004673 44 GLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETA 123 (738)
Q Consensus 44 GLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~ 123 (738)
.+...+..++..++.++.|+++||+|||++++++.++.++++++.+++++...+++++++.|++.++.++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677889999999999999999999999999999999999999988888888999999998889999999999999
Q ss_pred CcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 124 PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 124 P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
|.+.|++++++..+...+|.++++.+...+... +...+|++.+++.++.+++ .+++||+
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~---~~~~pf~i~a~~lll~~ll-~~~LPET 736 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI---TKAAPILFASAALACGGLL-ALKLPDT 736 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 999999999999999999999997665443322 4566777777776665544 5566988
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.32 E-value=5.8e-11 Score=126.09 Aligned_cols=149 Identities=17% Similarity=0.106 Sum_probs=124.8
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHH
Q 004673 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV--YVLCIARL 102 (738)
Q Consensus 25 ~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~--~~liI~r~ 102 (738)
.....+.+.++++.++.+.+++.+.+.++..++.++.|+++||+|||+.+.++.++.+++.++..+.++. ..+++..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 224 LIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 3344555678899999999999999999999999999999999999999999999999988888776643 33456678
Q ss_pred HHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 004673 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLY 175 (738)
Q Consensus 103 l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~ 175 (738)
+.|++.+...+....++.|.+|+++|+++.++.+....+|..+++.+. ....+..||++.|.+.++++++.
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~--g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIA--SHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH--HHHHhhhchhhHHHHHHHHHHHh
Confidence 889988888888888999999999999999999999999999995544 33456679999999888777654
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.31 E-value=2e-10 Score=125.63 Aligned_cols=159 Identities=16% Similarity=0.147 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 004673 24 TIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (738)
Q Consensus 24 ~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l 103 (738)
.....++.+..+.+.+ ..++..+.+.++..++.++.|++.||+|+|+.+.++.++.+++.++..+.++.+.+++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (399)
T PRK05122 234 TIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL 311 (399)
T ss_pred HHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3334445545566663 45667788889999999999999999999999999999999998888888888888889999
Q ss_pred HHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcc
Q 004673 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (738)
Q Consensus 104 ~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~fl 183 (738)
.|++.+..++.....+.|.+|+++||++.++......+|..+++.+. ....+..||++.|.+.++++++.+++.++..
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLA--GLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998888888888999999999999999999999988875443 3445566899999999888887666555544
Q ss_pred cCC
Q 004673 184 PES 186 (738)
Q Consensus 184 pES 186 (738)
++.
T Consensus 390 ~~~ 392 (399)
T PRK05122 390 RRA 392 (399)
T ss_pred ccc
Confidence 444
No 128
>TIGR00895 2A0115 benzoate transport.
Probab=99.30 E-value=3.6e-11 Score=128.84 Aligned_cols=165 Identities=17% Similarity=0.203 Sum_probs=122.5
Q ss_pred hhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 004673 532 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 611 (738)
Q Consensus 532 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~ 611 (738)
......++.|.+.++ +|++....+.+. ....++.+++.++.|+++||+|||+.+..+..+..++.+++..
T Consensus 32 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 101 (398)
T TIGR00895 32 DLAAMGFAAPAISAE---------WGLDPVQLGFLF-SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL 101 (398)
T ss_pred HHHHHHhhHHHHhhc---------cCCCHHHHHHHH-HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 344566677777666 445555555544 5567888999999999999999999999988887777666654
Q ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcch
Q 004673 612 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 691 (738)
Q Consensus 612 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~ 691 (738)
.... +..++..++..++.+ ...+....+.+|.+|++.|+.+.++..+...+|.++++.+.+.+.+..||+
T Consensus 102 ~~~~---------~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 102 ATNV---------TQLLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWR 171 (398)
T ss_pred ccch---------HHHHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccce
Confidence 3221 122222333332222 334556688899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCC
Q 004673 692 GAFGVYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~e~~ 716 (738)
..|.+.++++++..++.+.++||+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9998887777777777777788764
No 129
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.29 E-value=7.2e-11 Score=128.90 Aligned_cols=182 Identities=13% Similarity=0.112 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 004673 517 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLL 596 (738)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~ 596 (738)
|.+.+..+..+++..+......++|.+.++.| .+....+ +......++.+++.++.|+++||+|||+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~---------~s~~~~~-~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~ 72 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLN---------ASEAQLH-IAFSVYLAGMAAAMLFAGKIADRSGRKPVAI 72 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhC---------CCHHHHH-HHHHHHHHHHHHHHHhHhHHHHHhCChHHHH
Confidence 45666667777777777777788888877754 4444444 4445567888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHH
Q 004673 597 TTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII 676 (738)
Q Consensus 597 ~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i 676 (738)
.+..+.+++.+++....... ...+..++...+.+ ...+..+.++.|.+|++.|+.+.++.+....++.++
T Consensus 73 ~~~~~~~i~~~~~~~~~~~~---------~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~ 142 (392)
T PRK10473 73 PGAALFIIASLLCSLAETSS---------LFLAGRFLQGIGAG-CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVL 142 (392)
T ss_pred HHHHHHHHHHHHHHHhCcHH---------HHHHHHHHHHhhhh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 98888877777665432211 22222222222222 223445678899999999999999999999999999
Q ss_pred HhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004673 677 VTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGM 718 (738)
Q Consensus 677 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 718 (738)
+|.+.+.+.+..||+..|.+.++++++..++.++.+||++..
T Consensus 143 ~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 143 APVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999888888999999998888888888877778887543
No 130
>PRK03545 putative arabinose transporter; Provisional
Probab=99.29 E-value=1.2e-10 Score=127.48 Aligned_cols=150 Identities=13% Similarity=0.141 Sum_probs=114.2
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 004673 556 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYF 635 (738)
Q Consensus 556 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 635 (738)
+|.++.+.+...+ ...++..++.++.|++.||+|||+++..+..+.+++.+......+.. ...++-++.+
T Consensus 39 ~~~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~r~~~G 108 (390)
T PRK03545 39 FHMQTAQVGLMLT-IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFT---------VLLISRIGIA 108 (390)
T ss_pred cCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHH---------HHHHHHHHHH
Confidence 5667666665554 45677788888899999999999999999888888877776543322 2222222222
Q ss_pred HHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 636 CCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 636 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
.......+....+..+.+|++.|+.+.|+......++..++|.+.+.+.+..||++.|++.++++++..++.+..+|+.
T Consensus 109 -~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 109 -FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred -HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2222334555678899999999999999999999999999999999999999999999999988888877777667764
Q ss_pred C
Q 004673 716 K 716 (738)
Q Consensus 716 ~ 716 (738)
+
T Consensus 188 ~ 188 (390)
T PRK03545 188 P 188 (390)
T ss_pred C
Confidence 3
No 131
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.28 E-value=3.3e-10 Score=124.57 Aligned_cols=155 Identities=15% Similarity=0.158 Sum_probs=124.8
Q ss_pred HHHH-HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 004673 27 GAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDG 105 (738)
Q Consensus 27 ~~lp-~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G 105 (738)
...| ++.+++|+++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+..+...+.++.+.+++.+++.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3455 456779999999999888888888889999999999999999888887776666655566778888888999999
Q ss_pred HHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccC
Q 004673 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (738)
Q Consensus 106 ~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpE 185 (738)
++.|...+....+..|.+|+ +||++.++++....+|..+++.+.. ...+..+|+.+|++.++++++.+++ .++.||
T Consensus 317 ~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G--~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 392 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAG--IVAEIWNYHAVFWFALVMIIATLFC-LLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhHHHHHHHHHHHHHHHHH-HHhhcC
Confidence 98888878888888999986 4999999999999999999965554 4456669999999888877775544 445554
No 132
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.28 E-value=3.3e-11 Score=134.56 Aligned_cols=179 Identities=15% Similarity=0.122 Sum_probs=132.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 004673 520 VGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTI 599 (738)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~ 599 (738)
+.+.+..+.............|.+.++. |.+....+.. .....++.+++.++.|+++||+|||+.++.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~---------g~s~~~~~~~-~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDL---------GSSLSQVQWV-ITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCChhhhhHH-HHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 3444444444445566777788887774 4454444444 45567899999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhh
Q 004673 600 PVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTY 679 (738)
Q Consensus 600 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~ 679 (738)
.+.+++.+++....... ..++..++.+. ......+....++.|.+|++.|+.+.++..+...++..++|.
T Consensus 75 ~~~~~~~~~~~~~~~~~---------~l~~~~~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 144 (485)
T TIGR00711 75 FAFTLGSLLCGVAPNLE---------LMIIFRVIQGF-GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPT 144 (485)
T ss_pred HHHHHHHHHHhCcCCHH---------HHHHHHHHHHh-hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 88888877765543222 22222222222 223344566688899999999999999999999999999999
Q ss_pred hHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004673 680 TLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGM 718 (738)
Q Consensus 680 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 718 (738)
+.+.+.+..||++.|++.+.++++..++.++.+||++..
T Consensus 145 ~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 183 (485)
T TIGR00711 145 LGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA 183 (485)
T ss_pred cHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc
Confidence 999999999999999988888888777777777775543
No 133
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.28 E-value=1.9e-10 Score=128.38 Aligned_cols=179 Identities=13% Similarity=0.092 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 004673 517 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLL 596 (738)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~ 596 (738)
..+....+..+........+..+.|.+.++ +|++..+.+... ....++..++.++.|+++||+|||+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~s~~~~g~~~-~~~~~~~~~~~~~~G~l~dr~g~r~~~~ 92 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD---------LGLSRSDIGLLA-TLFYITYGVSKFVSGIVSDRSNARYFMG 92 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh---------cCCCHHHHHHHH-HHHHHHHHHHHhhhhHHHhhcCCchhHH
Confidence 333344444444433344566777888776 455555555554 5567888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHH
Q 004673 597 TTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII 676 (738)
Q Consensus 597 ~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i 676 (738)
++..+..++.+++....... ......++...+.+.. .+....++.|.+|++.|+.+.|+.+....+|.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~---------~l~~~~~l~g~~~g~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 162 (434)
T PRK11663 93 IGLIATGIINILFGFSSSLW---------AFALLWVLNAFFQGWG-WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGAL 162 (434)
T ss_pred HHHHHHHHHHHHHHHHhHHH---------HHHHHHHHHHHHHHcc-chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888877666543222 2222222233333333 3455578899999999999999999999999999
Q ss_pred HhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 677 VTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 677 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
++.+.+.+.+..||++.|.+.++++++..++.++++||+
T Consensus 163 ~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 163 IPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999988877776666556666654
No 134
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.27 E-value=1.3e-10 Score=127.07 Aligned_cols=176 Identities=18% Similarity=0.093 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 004673 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (738)
Q Consensus 9 lil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~ 88 (738)
....+..+........+....|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 366 (481)
T TIGR00879 287 LGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVL 366 (481)
T ss_pred HHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 33444444444444445556788888999999889999999999999999999999999999999999988888887777
Q ss_pred Hhh-----h------hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhc
Q 004673 89 LWS-----P------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA 157 (738)
Q Consensus 89 afa-----~------~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~ 157 (738)
++. + +...+....++.+.......+....++.|.+|+++|++++++......+|.++++.+.. ...+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~--~~~~ 444 (481)
T TIGR00879 367 GILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFP--TMLE 444 (481)
T ss_pred HHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 621 1 33333333333333222334666678899999999999999999999999999854443 3345
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 158 SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 158 ~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
..+|++.|++.++++++.+++.+++.||+
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecccC
Confidence 56899999999999888777777778876
No 135
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.27 E-value=1.2e-10 Score=129.34 Aligned_cols=180 Identities=12% Similarity=0.066 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q 004673 518 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT 597 (738)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~ 597 (738)
.++...+.++.+......+.+..|.+.++ +|.+..+.+...+ ...++..++.++.|+++||+|||+++..
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~---------~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKD---------LGLSATMFGLAAT-LFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhh---------cCCCHHHHHHHHH-HHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 34444444444444445455566655444 5666666665554 4568888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHH
Q 004673 598 TIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIV 677 (738)
Q Consensus 598 ~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~ 677 (738)
+..+..++.++..+..... ..++.-++.+.+. .+..+....++.|.+|++.|+.+.++.+....+|.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~---------~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPE---------SLYLLRILVGIAE-AGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHH-hhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888877776643222 2222222222222 23345555778999999999999999999999999999
Q ss_pred hhhHHHHHH------hhcchhHHHHHHHHHHHHHHHHHHhccCCCC
Q 004673 678 TYTLPVMLS------SIGLAGAFGVYAVVCFISWVFVFLRVPETKG 717 (738)
Q Consensus 678 ~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 717 (738)
+.+.+.+.+ ..||+++|.+.++.+++..++.++++||++.
T Consensus 149 ~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 149 LILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 999998875 3599999999888888777777778888764
No 136
>PRK10054 putative transporter; Provisional
Probab=99.26 E-value=1.8e-10 Score=127.23 Aligned_cols=172 Identities=10% Similarity=0.133 Sum_probs=123.1
Q ss_pred HHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 004673 525 QILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIV 604 (738)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v 604 (738)
..+....+......++|.++++ ++|++....+...+ ...+..+++.++.|+++||+|||+.++++..+.++
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~--------~~g~s~~~~g~~~s-~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSR--------QYSLSVDLIGYAMT-IALTIGVVFSLGFGILADKFDKKRYMLLAITAFAS 85 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence 3333444566666777777755 36677766666654 45677888999999999999999999988887777
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHH
Q 004673 605 SLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVM 684 (738)
Q Consensus 605 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~ 684 (738)
+.+++.+.... +..+++..+...+.. ...+....+.+|.+|++.|+.+.|+.+...++|.+++|.+.+.+
T Consensus 86 ~~~~~~~~~~~---------~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 86 GFIAIPLVNNV---------TLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHHHHhHH---------HHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666543322 122222222222222 33455668889999999999999999999999999999999988
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHHhccCCC
Q 004673 685 LSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 685 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 716 (738)
.. .||+..|.+.++++++..++.++++|+++
T Consensus 156 ~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 156 VM-QSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HH-hccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 75 78999999888777777666666666553
No 137
>PRK12382 putative transporter; Provisional
Probab=99.26 E-value=3.4e-10 Score=123.60 Aligned_cols=159 Identities=16% Similarity=0.108 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 004673 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIAR 101 (738)
Q Consensus 22 ~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r 101 (738)
...+....|.+.++.+.+. .++..+.+.++..++.++.|++.||+|+|+.+.++..+.+++.++..+.++.+.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (392)
T PRK12382 232 FAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGA 309 (392)
T ss_pred HhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 3334444555556667654 45666778888899999999999999999999999999999988888888888888899
Q ss_pred HHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhh
Q 004673 102 LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVF 181 (738)
Q Consensus 102 ~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~ 181 (738)
++.|++.+...+...+.+.+.+|+++||++.++.++...+|..+++.+ .....+..||+..|.+.+++.++..++.++
T Consensus 310 ~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~--~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 310 ALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPL--AGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999998888888899999999999999999999999999998544 444456679999999999888776666554
Q ss_pred ccc
Q 004673 182 FLP 184 (738)
Q Consensus 182 flp 184 (738)
+.+
T Consensus 388 ~~~ 390 (392)
T PRK12382 388 SFR 390 (392)
T ss_pred hcc
Confidence 443
No 138
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.25 E-value=2.6e-10 Score=125.96 Aligned_cols=151 Identities=15% Similarity=0.199 Sum_probs=115.4
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 004673 556 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYF 635 (738)
Q Consensus 556 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 635 (738)
+|+++++.+...+ ...++..++.++.|.++||+|||+.++.+..+.+++.++.....+. +..+++-++.+
T Consensus 50 ~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~---------~~l~~~r~l~G 119 (394)
T PRK10213 50 LGISEGVAGQSVT-VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSF---------SLLLIGRACLG 119 (394)
T ss_pred cCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChH---------HHHHHHHHHHH
Confidence 5666666666554 4568888899999999999999999999999988877766554222 22333333333
Q ss_pred HHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 636 CCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 636 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
++.+. ..+....++.|.+|++.|+.+.++......++..++|.+.+.+.+..||++.|++.++++++..++.+..+||+
T Consensus 120 ~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 120 LALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 33333 34566688899999999999999999999999999999999999999999999988877777666666667876
Q ss_pred CC
Q 004673 716 KG 717 (738)
Q Consensus 716 ~~ 717 (738)
++
T Consensus 199 ~~ 200 (394)
T PRK10213 199 PG 200 (394)
T ss_pred Cc
Confidence 43
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.25 E-value=7.9e-11 Score=124.94 Aligned_cols=164 Identities=18% Similarity=0.135 Sum_probs=123.5
Q ss_pred hhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHH
Q 004673 534 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 613 (738)
Q Consensus 534 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~ 613 (738)
..+....|.+.++ +|+++...+... ....++.+++.++.|+++||+|||+.+..+..+.+++.+++....
T Consensus 11 ~~~~~~~~~~~~~---------~g~s~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 11 ANLSFAAPMLQED---------LGLSAAQYGYVF-SAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred HhhhHhHHHHHHh---------hCCChhhHHHHH-HHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 3455556665555 456665555554 556799999999999999999999999998888887777766543
Q ss_pred HhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhH
Q 004673 614 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 693 (738)
Q Consensus 614 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~ 693 (738)
.. +...+..++.+.+. ....+....++.|.+|++.|+.+.++......+|..+++.+.+.+.+..+|++.
T Consensus 81 ~~---------~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 150 (399)
T TIGR00893 81 AY---------VSLYILRVLLGAAE-APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWA 150 (399)
T ss_pred CH---------HHHHHHHHHHHHHH-HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHH
Confidence 22 22333333333333 334455668889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCC
Q 004673 694 FGVYAVVCFISWVFVFLRVPETKG 717 (738)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~e~~~ 717 (738)
|.+.++++++..++.++..||++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 151 FIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHHHHhhheecCCCC
Confidence 998888888777777766776544
No 140
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.25 E-value=2.4e-08 Score=110.73 Aligned_cols=120 Identities=21% Similarity=0.171 Sum_probs=94.5
Q ss_pred HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhC-----ChHHHHH-HHHHHHHHHHHHHhh-----h-------
Q 004673 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLIL-SSVLYFVSGLVMLWS-----P------- 92 (738)
Q Consensus 31 ~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfG-----RR~~Lli-glvI~aI~s~~~afa-----~------- 92 (738)
.|..|++++....+.+.++..+... ..+.+|+.+|+.+ ||..+++ |.++...+..+..++ .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 3667899999999999888877665 5889999999999 8776665 555555555555542 1
Q ss_pred -hH---HHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHH
Q 004673 93 -NV---YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (738)
Q Consensus 93 -~~---~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~ 151 (738)
.+ ....+.-++.|+|.+...+...+++.|..|+++|+++.++..+..-+|.+++.....
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g 146 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFG 146 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 21 234445678899999999999999999999999999999999999999999865543
No 141
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.25 E-value=5.1e-10 Score=125.13 Aligned_cols=165 Identities=16% Similarity=0.092 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hH--HHH
Q 004673 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NV--YVL 97 (738)
Q Consensus 22 ~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~--~~--~~l 97 (738)
........|.+.+++|.+.....+......++..++.+++++++||+|||++++++.++.+++.++.+... +. ...
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 33444456888888999887777877888888999999999999999999999999999999888776432 11 122
Q ss_pred HHHHHHHHHHHhhh-hhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHH----HHhccchhHHHHHHHHHHH
Q 004673 98 CIARLLDGFGVGLA-VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM----SLLASPSWRLMLGVLSIPA 172 (738)
Q Consensus 98 iI~r~l~G~g~G~~-~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l----~l~~~~~Wr~~~~I~ail~ 172 (738)
.++-++.+++.+.. .+....++.|.+|+++|+.+.++.+....+|.++++...... ...+..+|++.|++.++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 23344444444432 366789999999999999999999999999998875443221 1234568999999988888
Q ss_pred HHHHHHHhhcccCC
Q 004673 173 LLYFAFAVFFLPES 186 (738)
Q Consensus 173 ~~~~~~i~~flpES 186 (738)
++.+++.+++.||+
T Consensus 447 ~~~~~~~~~~~~e~ 460 (479)
T PRK10077 447 VLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHhccccC
Confidence 88777777788887
No 142
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.23 E-value=3.6e-10 Score=123.11 Aligned_cols=161 Identities=19% Similarity=0.221 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHhhCCChh----HHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 004673 23 ATIAGAIVYIKKDLNLGTT----VEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLC 98 (738)
Q Consensus 23 ~~~~~~lp~L~~dfGlS~s----~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~li 98 (738)
..+.+.++.+..+.+.+.. ..+.+.+++.++..++.++.|+++||+|||+++.++.++.+++.+...+.++.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3344455555454433322 345666777888889999999999999999999999998888888888888888888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 004673 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (738)
Q Consensus 99 I~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~ 178 (738)
+.+++.|++.+...+...+++.+..|+++||+..++......+|..+++.+ .....+..+|+..|++.+++.++..++
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~--~G~l~~~~g~~~~f~~~~~~~l~~~~~ 393 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLM--GAAISANYGFRAVFLVTAGVVLFNAVY 393 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHH--HHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999554 444466679999999999888887666
Q ss_pred HhhcccC
Q 004673 179 AVFFLPE 185 (738)
Q Consensus 179 i~~flpE 185 (738)
.++..++
T Consensus 394 ~~~~~~~ 400 (408)
T PRK09874 394 SWNSLRR 400 (408)
T ss_pred HHHHHHH
Confidence 5554443
No 143
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.23 E-value=3.4e-10 Score=122.10 Aligned_cols=177 Identities=12% Similarity=0.071 Sum_probs=121.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 004673 520 VGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTI 599 (738)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~ 599 (738)
..+.+..+........+....|.+.++ +|++..+.+.+. ....++.+++.++.|+++||+|||+.++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~s~~~~g~~~-~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~ 84 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAEVAGE---------FGLTTVDAASLI-SAALISRWFGALMFGLWGDRYGRRLPMVTSI 84 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---------hCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 333333333333445455566665554 556666665555 4467889999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhh
Q 004673 600 PVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTY 679 (738)
Q Consensus 600 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~ 679 (738)
.+.+++.+++.+..... ...+..++.+++.+. ..+....+..|.+|++.|+.+.++.++...+|.++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~---------~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 154 (405)
T TIGR00891 85 VLFSAGTLACGFAPGYI---------TMFIARLVIGIGMGG-EYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQ 154 (405)
T ss_pred HHHHHHHHHHHHhccHH---------HHHHHHHHHHhhhhh-hhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 88888777665543222 223333333333332 33445578899999999999999999999999999999
Q ss_pred hHHHHHHhhc--chhHHHHHHHHHHHHHHHHHHhccCCCC
Q 004673 680 TLPVMLSSIG--LAGAFGVYAVVCFISWVFVFLRVPETKG 717 (738)
Q Consensus 680 ~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 717 (738)
+.+.+.+..+ |+..|.+.++.. +..++....+||++.
T Consensus 155 l~~~l~~~~~~~w~~~f~~~~~~~-~~~~~~~~~~~~~~~ 193 (405)
T TIGR00891 155 VYSLVVPVWGDGWRALFFISILPI-IFALWLRKNIPEAED 193 (405)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHH-HHHHHHHHhCCCChh
Confidence 9999888776 888887654443 334455566787643
No 144
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.23 E-value=2.2e-10 Score=130.34 Aligned_cols=181 Identities=14% Similarity=0.072 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q 004673 518 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT 597 (738)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~ 597 (738)
.+..+.+..+....-.+.+..-.|.+.++.+ .+..+..+.. ..+.++...+.++.|+++||+|||++++.
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~---------~s~~~~~~~~-~~~~l~~~~~~~~~G~l~D~~Grk~~l~~ 76 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLG---------ASGNELLWII-DIYSLVMAGMVLPMGALGDRIGFKRLLML 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCHhHHHHHH-HHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 4455555555555556667777888877744 4444545554 44667778888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccC-cccchhhhhHHHHHhhhHHHHH
Q 004673 598 TIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIF-PTKVRGICIAICAMAYWICDII 676 (738)
Q Consensus 598 ~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~gi~~~~~~i~~~i 676 (738)
+..+.+++.+++....... ..++.-.+.+++.+. ..+.......+.+ |++.|+.+.|+..+...+|..+
T Consensus 77 ~~~~~~~~~~~~~~a~~~~---------~li~~r~l~G~g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 77 GGTLFGLASLAAAFSPTAS---------WLIATRALLAIGAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HHHHHHHHHHHHHHcCCHH---------HHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888877643322 223333333333332 3333334444554 7899999999999999999999
Q ss_pred HhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004673 677 VTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGM 718 (738)
Q Consensus 677 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 718 (738)
+|.+++.+.+..||++.|++...++++..++.++++|+.++.
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~ 188 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGR 188 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999998888888888887888875443
No 145
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.23 E-value=5.1e-10 Score=126.17 Aligned_cols=167 Identities=16% Similarity=0.067 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHH-HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH-
Q 004673 10 AATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV- 87 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp-~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~- 87 (738)
.+++..++.......+....| ++.+++|++..+.++..+++.++..++.+++|+++||+|||+.+.++..+..++..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~ 341 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG 341 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 344445554444444555566 466779999999999999999999999999999999999998877655444443322
Q ss_pred -HHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhh-hhHhhHHHHHHHHHhc--------
Q 004673 88 -MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSG-GMFLAYCMVFGMSLLA-------- 157 (738)
Q Consensus 88 -~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~-G~~I~~~~~~~l~l~~-------- 157 (738)
.....+.+.+.+++++.|+............+.|.+|++.||.+.++.+....+ |.++++.+... ..+
T Consensus 342 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~--i~~~~~~g~~~ 419 (467)
T PRK09556 342 VYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGM--IADPTKNGTPI 419 (467)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHH--Hhccccccccc
Confidence 223456777778888888755444334446777999999999999999988886 66776444333 334
Q ss_pred ----cchhHHHHHHHHHHHHHHHHH
Q 004673 158 ----SPSWRLMLGVLSIPALLYFAF 178 (738)
Q Consensus 158 ----~~~Wr~~~~I~ail~~~~~~~ 178 (738)
..+|+..|.+.++.+++.+++
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~ 444 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICL 444 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHH
Confidence 457999999987777765544
No 146
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.23 E-value=7.9e-10 Score=120.97 Aligned_cols=154 Identities=18% Similarity=0.089 Sum_probs=126.1
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 004673 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (738)
Q Consensus 25 ~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~ 104 (738)
+....|.+.++.|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.+..+++.++..+.++.+.+.+.-++.
T Consensus 239 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 239 LLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 33456777788999999999999999999999999999999999999999988887777777777778888888888899
Q ss_pred HHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHh
Q 004673 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALLYFAFAV 180 (738)
Q Consensus 105 G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~-~~Wr~~~~I~ail~~~~~~~i~ 180 (738)
|++.+...+...+++.|.+|+++||++.++.+....+|.++++.+.... .+. .+|...+.+.....++.+++.+
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l--~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQL--LALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhh--hccCCchHHHHHHHHHHHHHHHHHHH
Confidence 9988888888899999999999999999999999999999986554433 333 3667677666666555444433
No 147
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.22 E-value=1.5e-09 Score=122.50 Aligned_cols=156 Identities=24% Similarity=0.277 Sum_probs=119.6
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhC-----ChHHHHHHHHHHHHHHHHHHhh----hhHHHH
Q 004673 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLILSSVLYFVSGLVMLWS----PNVYVL 97 (738)
Q Consensus 27 ~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfG-----RR~~LliglvI~aI~s~~~afa----~~~~~l 97 (738)
...|++++++|+++++...+.++..+... .-++.|.++|-+- ||+-++++.++.+++.+..+.. .+....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 45578999999999999888888777666 4577899999874 5556677777776666666653 356667
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhhcCC--cchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 004673 98 CIARLLDGFGVGLAVTLVPLYISETAP--SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLY 175 (738)
Q Consensus 98 iI~r~l~G~g~G~~~~~~~a~IaE~~P--~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~ 175 (738)
.++-++..+|......+.-+++.|... ++.||...+.......+|.+++..+. +...+..++|..|.+.+++.++.
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~--G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLS--GPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh--hhhhhcCCCeEEehHHHHHHHHH
Confidence 777788899999999999999999873 33478888888889999999985554 34456678999999988888777
Q ss_pred HHHHhhcccC
Q 004673 176 FAFAVFFLPE 185 (738)
Q Consensus 176 ~~~i~~flpE 185 (738)
++..++..+|
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 6666666665
No 148
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.22 E-value=5.8e-10 Score=126.54 Aligned_cols=177 Identities=12% Similarity=0.026 Sum_probs=116.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 004673 515 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKL 594 (738)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~ 594 (738)
++.++.+... ++..+........+.|.+.++ +|++..+.+.. .....++.+++.+++|+++||+|||+.
T Consensus 35 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~---------~gls~~~~g~~-~~~~~~~~~~~~~~~G~l~dr~G~r~~ 103 (476)
T PLN00028 35 MRAFHLSWIS-FFTCFVSTFAAAPLLPIIRDN---------LNLTKSDIGNA-GIASVSGSIFSRLAMGPVCDLYGPRYG 103 (476)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---------cCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 3444444333 333333344455566666655 55665555554 455678888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHH
Q 004673 595 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICD 674 (738)
Q Consensus 595 l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~ 674 (738)
+..+.++.+++.++........ ...++.++.+++.+ .+.+ ...+++|.+|++.|+.+.|+.+...++|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~s~~---------~l~~~r~l~G~~~~-~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~ 172 (476)
T PLN00028 104 SAFLLMLTAPAVFCMSLVSSAT---------GFIAVRFFIGFSLA-TFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGG 172 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHH-hhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHH
Confidence 9888877777766655533221 22222222222222 2222 33567899999999999999998888888
Q ss_pred HHHhhhHHHHHHh---------hcchhHHHHHHHHHHHHHHHHHHhcc
Q 004673 675 IIVTYTLPVMLSS---------IGLAGAFGVYAVVCFISWVFVFLRVP 713 (738)
Q Consensus 675 ~i~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 713 (738)
.+++.+.+.+... .||++.|.+.++++++..++.+++.+
T Consensus 173 ~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 173 GVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8888877765432 48999999988888877666655443
No 149
>PRK10504 putative transporter; Provisional
Probab=99.22 E-value=3.7e-10 Score=126.52 Aligned_cols=175 Identities=14% Similarity=0.108 Sum_probs=126.4
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 004673 522 VGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPV 601 (738)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~ 601 (738)
+.+..+......+.+..+.|.+.++. |.+....+... ....++..++.++.|+++||+|||+.++.+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~---------g~s~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~ 84 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQSL---------GESPLHMHMVI-VSYVLTVAVMLPASGWLADRVGVRNIFFTAIVL 84 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHh---------CcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 33344444444556777888888774 45555555544 556688888999999999999999999988777
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhH
Q 004673 602 LIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTL 681 (738)
Q Consensus 602 ~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~ 681 (738)
.+++.+++...... +...+..++.+++. ....+....+..|.+|++.|+.+.|+.+....++..++|.+.
T Consensus 85 ~~~~~~~~~~~~~~---------~~l~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 154 (471)
T PRK10504 85 FTLGSLFCALSGTL---------NELLLARVLQGVGG-AMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALG 154 (471)
T ss_pred HHHHHHHHHHhCCH---------HHHHHHHHHHHhhh-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 77766655443211 12222223332222 233455667788999999999999999999999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCC
Q 004673 682 PVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 682 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 716 (738)
+.+.+..||++.|.+...++.+..+......|+.+
T Consensus 155 g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 155 GLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999888888877777777666543
No 150
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.20 E-value=1.4e-09 Score=116.75 Aligned_cols=150 Identities=17% Similarity=0.219 Sum_probs=122.9
Q ss_pred HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhh
Q 004673 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGL 110 (738)
Q Consensus 31 ~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~ 110 (738)
++.+++|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+..+...+.++.+.+++.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999988888777888889999999999999999988887777766666778888888899999999998
Q ss_pred hhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhccc
Q 004673 111 AVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (738)
Q Consensus 111 ~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flp 184 (738)
..+....++.|..|++ ++++.++++....+|..+++.+.. ...+..+|+..|++.++++++..++ ..+++
T Consensus 305 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g--~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 374 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGG--ILAERWSYHAVYWFAIVMLIVALFC-LLLIK 374 (375)
T ss_pred HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHH--HHHHhccchhHHHHHHHHHHHHHHH-Hheec
Confidence 8888889999998864 679999999999999999854443 3355568999999988887775544 34444
No 151
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.20 E-value=7.7e-10 Score=122.17 Aligned_cols=159 Identities=17% Similarity=0.133 Sum_probs=135.2
Q ss_pred HHHHHHHHHh-hCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 004673 26 AGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (738)
Q Consensus 26 ~~~lp~L~~d-fGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~ 104 (738)
....|.+.++ +|.+..+.+++.+...++..++.++.+++.||.++++++..+.++.+++.++..+.++.+.+.++.++.
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 3455666565 899999999999999999999999999999998888899999888888888888888988888899999
Q ss_pred HHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhccc
Q 004673 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (738)
Q Consensus 105 G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flp 184 (738)
|++.+...+...+++.|..|++.||+++++......+|..+++.+. ....+..|++..+.+.+++.++..++....++
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~--G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALL--GGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHH--HHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 9999888888889999999999999999999999999999995544 44456668888888888777776666667777
Q ss_pred CC
Q 004673 185 ES 186 (738)
Q Consensus 185 ES 186 (738)
+.
T Consensus 401 ~~ 402 (417)
T PRK10489 401 EL 402 (417)
T ss_pred cc
Confidence 76
No 152
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.20 E-value=7.2e-10 Score=117.44 Aligned_cols=163 Identities=15% Similarity=0.047 Sum_probs=115.0
Q ss_pred hhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 004673 533 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 612 (738)
Q Consensus 533 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~ 612 (738)
.......+|.+..+.+ .+....+. ......++.+++.++.|+++||+|||+.++.+..+..++.+++...
T Consensus 15 ~~~~~~~~~~~~~~~~---------~s~~~~g~-~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 15 TAITQVALPLYVLAGT---------GSASVLSL-AALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHhh---------ccHHHHHH-HHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666643 34444444 4455678888999999999999999999999888777776666554
Q ss_pred HHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchh
Q 004673 613 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 692 (738)
Q Consensus 613 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~ 692 (738)
.... ..+.+...+..++..++. ....+....+.+|.+|++.|+.+.++.+....+|.++++.+.+.+.+..||+.
T Consensus 85 ~~~~----~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~ 159 (365)
T TIGR00900 85 ALLG----GLNIWQVYVLAGILAIAQ-AFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKW 159 (365)
T ss_pred HHcC----CCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3111 011222333333333333 33445566888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 004673 693 AFGVYAVVCFISWVFVFL 710 (738)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~ 710 (738)
.|++.++.++++.++.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 160 AIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 988777666665544443
No 153
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.19 E-value=8.2e-10 Score=121.37 Aligned_cols=151 Identities=15% Similarity=0.160 Sum_probs=112.3
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 004673 556 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYF 635 (738)
Q Consensus 556 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 635 (738)
+|++....+... ....++..++.++.|+++||+|||+.++.+..+.+++.+.+....... ......++.+
T Consensus 43 ~~~s~~~~~~~~-~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~---------~l~~~~~l~G 112 (406)
T PRK15402 43 FNAGAEWVPTSM-TAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIE---------QFTLLRFLQG 112 (406)
T ss_pred hCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHH---------HHHHHHHHHH
Confidence 556665555555 456788889999999999999999999998888877776665532211 1222222222
Q ss_pred HHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 636 CCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 636 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
++.+ ...+....++.|.+|++.|..+.++......++..++|.+.+.+.+..+|+++|++.++++++..+..++..||+
T Consensus 113 ~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (406)
T PRK15402 113 IGLC-FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPET 191 (406)
T ss_pred hHhh-hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2222 223455677789999999999999988888899999999999999989999999988888888877777778887
Q ss_pred CC
Q 004673 716 KG 717 (738)
Q Consensus 716 ~~ 717 (738)
+.
T Consensus 192 ~~ 193 (406)
T PRK15402 192 AG 193 (406)
T ss_pred Cc
Confidence 54
No 154
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.19 E-value=1.5e-10 Score=123.09 Aligned_cols=164 Identities=14% Similarity=0.113 Sum_probs=120.5
Q ss_pred hhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 004673 533 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 612 (738)
Q Consensus 533 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~ 612 (738)
...+....|.+.++ +|++..+.+.+. ....++.+++.++.|+++||+|||++++.+..+.+++.+++...
T Consensus 11 ~~~~~~~~~~~~~~---------~g~s~~~~g~~~-~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 11 RKNFALAMPYLVEE---------IGLSKTDLGLLL-SSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred HHhhhhhhHHHHHH---------hCCCHhHHHHHH-HHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 34455667776665 455555555554 55678999999999999999999999999998888888777665
Q ss_pred HHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHh-hhHHHHHHhhcch
Q 004673 613 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVT-YTLPVMLSSIGLA 691 (738)
Q Consensus 613 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~-~~~~~~~~~~g~~ 691 (738)
.... ..++..++.+ .......+....++.|.+|++.|+.+.++.+....+|.++++ .+.+.+....+|+
T Consensus 81 ~~~~---------~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 150 (379)
T TIGR00881 81 TSLW---------VMAALWALNG-IFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWH 150 (379)
T ss_pred hhHH---------HHHHHHHHHH-hhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCch
Confidence 3222 2222222222 222334566668889999999999999999999999999999 4666666778999
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCC
Q 004673 692 GAFGVYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~e~~ 716 (738)
..|.+.++++++..++++++.||++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 151 WVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred hHHHHHHHHHHHHHHHHheeeCCCc
Confidence 9998888888777777777777653
No 155
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.17 E-value=7.6e-10 Score=123.19 Aligned_cols=152 Identities=16% Similarity=0.134 Sum_probs=114.8
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 634 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 634 (738)
.+|.+........++ ..++..++.++.|+++||+|||++++.+..+.+++.++........ ..+++-++.
T Consensus 45 ~~~~~~~~~~~~~s~-~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~---------~l~~~r~l~ 114 (413)
T PRK15403 45 DFNADVSLAPASVSL-YLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMT---------QFLIARFIQ 114 (413)
T ss_pred HhCCCHHHHHHHHHH-HHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHH---------HHHHHHHHH
Confidence 466666666555544 5688888999999999999999999999888887777666543221 222222222
Q ss_pred HHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccC
Q 004673 635 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPE 714 (738)
Q Consensus 635 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e 714 (738)
+++.+ ...+..+.+..|.+|++.|+.+.++.+....++..++|.+++.+.+..||++.|++.+++.++++++.++.+||
T Consensus 115 Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 115 GTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22222 22344557788999999999999999999999999999999999988899999999888888887776777898
Q ss_pred CCC
Q 004673 715 TKG 717 (738)
Q Consensus 715 ~~~ 717 (738)
++.
T Consensus 194 ~~~ 196 (413)
T PRK15403 194 TVK 196 (413)
T ss_pred Ccc
Confidence 754
No 156
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.17 E-value=2.5e-10 Score=120.50 Aligned_cols=150 Identities=21% Similarity=0.280 Sum_probs=111.5
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 634 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 634 (738)
++|.+..+.+.+. ....++.+++.++.|+++||+|||+.++.+..+.+++.++..+. . ..+..++..++.
T Consensus 26 ~~~~s~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~l~ 95 (352)
T PF07690_consen 26 ELGLSPSQIGLLF-SAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA---S------NFWLLLIARFLL 95 (352)
T ss_dssp CSTTTSHCHHHHH-HHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH---C------CHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh---h------hHHHHhhhcccc
Confidence 3566666666655 44678889999999999999999999999999888884444432 1 112233333333
Q ss_pred HHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccC
Q 004673 635 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPE 714 (738)
Q Consensus 635 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e 714 (738)
+++. ....+....++.|.+|++.|+.+.++.+....+|.++++.+.+.+.+..||+..|++.++++++..++...+.++
T Consensus 96 g~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 96 GIGS-GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHH-HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred cccc-ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhh
Confidence 3333 345556668889999999999999999999999999999999999988899999999999998887764455544
Q ss_pred C
Q 004673 715 T 715 (738)
Q Consensus 715 ~ 715 (738)
+
T Consensus 175 ~ 175 (352)
T PF07690_consen 175 P 175 (352)
T ss_dssp -
T ss_pred c
Confidence 3
No 157
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.16 E-value=9.6e-10 Score=120.31 Aligned_cols=164 Identities=11% Similarity=0.135 Sum_probs=121.3
Q ss_pred hhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHH
Q 004673 534 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 613 (738)
Q Consensus 534 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~ 613 (738)
......+|.+.++ +|.+....+... ....++.+++.++.|+++||+|||+.+..+..+.+++.++.....
T Consensus 20 ~~~~~~l~~~~~~---------~g~s~~~~g~~~-s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~ 89 (382)
T PRK10091 20 FGIMGVLTELAHD---------VGISIPAAGHMI-SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS 89 (382)
T ss_pred HHHHhChHHHHHH---------cCCCHHHHhHHH-HHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC
Confidence 3445566766665 455555555555 456789999999999999999999999999988888877766543
Q ss_pred HhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhH
Q 004673 614 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 693 (738)
Q Consensus 614 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~ 693 (738)
... ..++.-++.+.+.+. ..+....+..|.+|++.|+.+.++......++..+++.+.+.+.+..||+++
T Consensus 90 ~~~---------~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~ 159 (382)
T PRK10091 90 SYL---------MLAIGRLVSGFPHGA-FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYT 159 (382)
T ss_pred cHH---------HHHHHHHHHHhhhHH-HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHH
Confidence 222 222222333322222 2344456778999999999999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCC
Q 004673 694 FGVYAVVCFISWVFVFLRVPETKG 717 (738)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~e~~~ 717 (738)
|.+.++++++..+..++++||.+.
T Consensus 160 f~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 160 FLLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc
Confidence 999888888777777777887543
No 158
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.15 E-value=1.1e-09 Score=120.66 Aligned_cols=147 Identities=18% Similarity=0.167 Sum_probs=108.0
Q ss_pred hhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 004673 532 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 611 (738)
Q Consensus 532 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~ 611 (738)
......+..|.+.++ +|+++.+.+... ....++.+++.++.|+++||+|||++++.+..+.+++.++..+
T Consensus 33 ~~~~~~~~~~~i~~~---------~~~s~~~~~~~~-~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 102 (426)
T PRK12307 33 DFMLIFYIMYLIKAD---------LGLTDMEGAFLA-TAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL 102 (426)
T ss_pred HHHHHHHHHHHHHHH---------hCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 344455555655555 456655555444 5567999999999999999999999999999999888877766
Q ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcch
Q 004673 612 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 691 (738)
Q Consensus 612 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~ 691 (738)
..... ...++-++.+.+.+ +..+....++.|.+|++.|+.+.++..+...+|.++++.+.+.+.+..||+
T Consensus 103 ~~~~~---------~l~~~r~l~G~g~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 103 ASGVI---------MLTLSRFIVGMGMA-GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HhHHH---------HHHHHHHHHHHHHh-hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 54322 22223333232222 234455577899999999999999999999999999999999988888999
Q ss_pred hHHHHHH
Q 004673 692 GAFGVYA 698 (738)
Q Consensus 692 ~~~~~~~ 698 (738)
+.|++..
T Consensus 173 ~~f~i~~ 179 (426)
T PRK12307 173 AAFFVGL 179 (426)
T ss_pred HHHHHHH
Confidence 8887643
No 159
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.15 E-value=3.3e-09 Score=116.30 Aligned_cols=155 Identities=12% Similarity=0.094 Sum_probs=130.2
Q ss_pred HHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 004673 19 GWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLC 98 (738)
Q Consensus 19 g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~li 98 (738)
......+....|.+.+++|.++.+.|++.++..++..++.++.+++.||+|+|+++.++.++.++..++.++++|.+.++
T Consensus 218 ~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (382)
T TIGR00902 218 QGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIF 297 (382)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHH
Confidence 33344444455666677999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhH-HHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 004673 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 99 I~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~-~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~ 177 (738)
+.+++.|+..+...+....++.+. |+++|+++.++++ ....+|.++++..+ +...+..++ ..|.+.++++++.++
T Consensus 298 ~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~--G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 298 LLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFA--GFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999998 9999999999876 46778888885444 444566676 667777777776543
No 160
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.15 E-value=3.4e-09 Score=115.84 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=120.4
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 004673 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (738)
Q Consensus 25 ~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~ 104 (738)
....+|.+.++.|.+.++.+++.+...++..++.++.|++.||+|+|+++..+.++.+++.+... . ........++.
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 33456777777899999999999999999999999999999999999999998888887766543 2 23344567888
Q ss_pred HHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 004673 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 105 G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~ 177 (738)
|++.+...|...+++.|..|+++++.+.+......++|.++++.+ .....+..+|++.|.+.+++.++..+
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~--~G~l~~~~g~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSF--TAMLMQNYSDNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 888888889999999999999888888888888899999999544 44556667899999998888876543
No 161
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.15 E-value=1.8e-09 Score=119.85 Aligned_cols=170 Identities=18% Similarity=0.210 Sum_probs=136.0
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 004673 524 IQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLI 603 (738)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~ 603 (738)
+..|.....-....-.+|.+.++ +|+|...+++++++ +.++..++.++...+.||+.||++++..+.+++
T Consensus 20 ~~~F~igttEfv~~gLLp~iA~d---------l~vs~~~aG~lis~-yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 20 LAAFAIGTTEFVPVGLLPPIAAD---------LGVSEGAAGQLITA-YALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred HHHHHHHhHHHHHHhchHHHHHH---------cCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 33333333345566677777777 55666677777755 679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHH
Q 004673 604 VSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPV 683 (738)
Q Consensus 604 v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~ 683 (738)
++-++.++...+. ...+.=++.... ...+.++...+.+++.|++.|+.++++..+...++..+|.+++.+
T Consensus 90 ~~n~l~alAp~f~---------~Ll~aR~~~g~a-~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 90 VSNLLSALAPSFA---------VLLLARALAGLA-HGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHhccHH---------HHHHHHHHHHHH-HHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 9999998877655 222222222222 233445566888999999999999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHhcc
Q 004673 684 MLSSIGLAGAFGVYAVVCFISWVFVFLRVP 713 (738)
Q Consensus 684 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 713 (738)
+-+.+|||.+|+..++++++..+..+..+|
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999
No 162
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.15 E-value=1.9e-09 Score=115.21 Aligned_cols=158 Identities=24% Similarity=0.203 Sum_probs=117.0
Q ss_pred HHHHHHHhHHHHHHHHHHHH-HhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHH--HHHHh
Q 004673 14 GNFLQGWDNATIAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG--LVMLW 90 (738)
Q Consensus 14 ~~~~~g~~~~~~~~~lp~L~-~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s--~~~af 90 (738)
..++............|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++.++..+..+.. ++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 306 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMAL 306 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444455566544 7789999999999999999999999999999999999998876655544433 22222
Q ss_pred --hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHh-HHHhhhhhHhhHHHHHHHHHhccch-hHHHHH
Q 004673 91 --SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLP-QFTGSGGMFLAYCMVFGMSLLASPS-WRLMLG 166 (738)
Q Consensus 91 --a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~-~~~~~~G~~I~~~~~~~l~l~~~~~-Wr~~~~ 166 (738)
.++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++. +....+|..+++.+. ....+..+ |+..++
T Consensus 307 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~--g~l~~~~g~~~~~~~ 384 (394)
T TIGR00883 307 LDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA--AALVAMTGDWYAIGY 384 (394)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH--HHHHHHcCcchhHHH
Confidence 246777778889999999999999999999999999999999984 555667887875443 44445556 888877
Q ss_pred HHHHHHH
Q 004673 167 VLSIPAL 173 (738)
Q Consensus 167 I~ail~~ 173 (738)
..++.++
T Consensus 385 ~~~~~~l 391 (394)
T TIGR00883 385 YLAALAL 391 (394)
T ss_pred HHHHHHH
Confidence 7665554
No 163
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.14 E-value=1.6e-09 Score=116.10 Aligned_cols=168 Identities=15% Similarity=0.137 Sum_probs=114.3
Q ss_pred HHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 004673 528 QQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLI 607 (738)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~ 607 (738)
..+.....+..+.|+++++ .+|+++...+.+. ....++.+++.++.|+++||+|||+.++.+..+.+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~--------~~~~s~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 12 LSFSVWFAFSPLAVQMIKD--------DLGLSTAQLGNLV-AVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHhHHhhhHHHHH--------HhCCCHHHhhHhh-HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3344455566777753332 3566665655554 556789999999999999999999999999988888877
Q ss_pred HHHHHH-HhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHH
Q 004673 608 ILVISE-TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 686 (738)
Q Consensus 608 ~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~ 686 (738)
++.... ... ...+..++.+.+ ... .+....+++|.+|++.|+.+.++......+|..+++.+.+.+..
T Consensus 83 ~~~~~~~~~~---------~~~~~~~~~g~~-~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 83 WAGLAVQSYS---------VLLLLRLFIGIA-GGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHhhhHH---------HHHHHHHHHHHh-chh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 776543 221 222222222222 222 33455788999999999999999998888999988888887766
Q ss_pred h----------hcchhHH-HHHHHHHHHHHHHHHHhccCC
Q 004673 687 S----------IGLAGAF-GVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 687 ~----------~g~~~~~-~~~~~~~~~~~~~~~~~~~e~ 715 (738)
. .+|++.| .+.+++.++..++.+...+|+
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 3 3788888 444555555555555555554
No 164
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.14 E-value=2.1e-09 Score=120.61 Aligned_cols=153 Identities=12% Similarity=0.014 Sum_probs=104.4
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHH
Q 004673 557 GISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFC 636 (738)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 636 (738)
|++..+.+... ....++..++.++.|+++||+|||++++.+..+.+++.+++.+..... ...+..++...+...
T Consensus 59 g~s~~~~g~~~-~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~l~gi 132 (452)
T PRK11273 59 GFSRGDLGFAL-SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT-----SSIAVMFVLLFLCGW 132 (452)
T ss_pred CCCHHHHHHHH-HHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhccc-----ccHHHHHHHHHHHHH
Confidence 45655555554 556788999999999999999999999999888888777665532110 011122222233333
Q ss_pred HhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHH-HhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 637 CFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII-VTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 637 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
+.+.. .+.....+.|.+|++.|+.+.|+.++...+|+.+ ++.+...+....||+..|++.++++++..++.++++||+
T Consensus 133 ~~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 133 FQGMG-WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred HHhcc-chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 33333 3333466789999999999999999999888754 444433333445899999988888888777777777775
Q ss_pred C
Q 004673 716 K 716 (738)
Q Consensus 716 ~ 716 (738)
.
T Consensus 212 ~ 212 (452)
T PRK11273 212 P 212 (452)
T ss_pred H
Confidence 4
No 165
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.14 E-value=9.1e-10 Score=118.92 Aligned_cols=161 Identities=17% Similarity=0.190 Sum_probs=121.5
Q ss_pred hhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 004673 536 VLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETL 615 (738)
Q Consensus 536 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~ 615 (738)
..-..|.+.++ +|+++.+.+... ....++..++.++.|+++||+|||+.+..+..+.+++.+++......
T Consensus 10 ~~p~~~~~~~~---------~~~s~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 79 (377)
T PRK11102 10 YLPALPVIAAD---------FGVSAGSVQMTL-SAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTI 79 (377)
T ss_pred HhccHHHHHHH---------hCCCHHHHHHHH-HHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 44556666665 456665555555 44678888999999999999999999999988888887777654322
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHH
Q 004673 616 QLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFG 695 (738)
Q Consensus 616 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~ 695 (738)
. ...+..++..++. ....+....++.|.+|++.|+.+.++.+....++..++|.+.+.+.+..||+..|.
T Consensus 80 ~---------~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 149 (377)
T PRK11102 80 D---------QLIYMRFLHGLAA-AAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFW 149 (377)
T ss_pred H---------HHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHH
Confidence 1 2222222222222 23344555788999999999999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHHhccCCC
Q 004673 696 VYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~e~~ 716 (738)
+.++++++..++..+++||++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 150 VLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHhCCccC
Confidence 888888888777777788764
No 166
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=2.5e-08 Score=113.59 Aligned_cols=171 Identities=18% Similarity=0.242 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCh-hHHHHHHHHH----HHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHH
Q 004673 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGT-TVEGLVVAMS----LIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (738)
Q Consensus 9 lil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~-s~iGLi~Sl~----~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI 83 (738)
...++-.|..++.........+.....++... ...+...... .+...+.++..|.++||+|||..+.+.+....+
T Consensus 25 ~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 25 PLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHH
Confidence 33444445455554444445555554443332 2233333333 567788889999999999999999999999998
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHH--HhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchh
Q 004673 84 SGLVMLWSPNVYVLCIARLLDGFG--VGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (738)
Q Consensus 84 ~s~~~afa~~~~~liI~r~l~G~g--~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~W 161 (738)
..+...+.. +|.++ +.|+. .+..+....++++|....++|....++...+...+..+++..+... ....|.
T Consensus 105 ~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~--~~~~~~ 177 (463)
T KOG2816|consen 105 PALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYL--VKFLGI 177 (463)
T ss_pred hHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHH--HHhcCc
Confidence 888888766 33333 33332 2345567789999999999999999999998888888885554444 444688
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 162 RLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 162 r~~~~I~ail~~~~~~~i~~flpES 186 (738)
-.+|.+.++..++..+...+++||+
T Consensus 178 a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 178 ALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhhccccc
Confidence 8899999999999889999999998
No 167
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.13 E-value=1.9e-09 Score=117.92 Aligned_cols=182 Identities=12% Similarity=0.096 Sum_probs=123.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 004673 515 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKL 594 (738)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~ 594 (738)
+|.+++......+..+. ........|.+.++ +|+++...+... ....++..++.++.|+++||+|||+.
T Consensus 7 ~~~l~~~~~~~~~~~~~-~~~~~p~~~~i~~~---------~~~s~~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~grr~~ 75 (394)
T PRK11652 7 VNLLFMLVLLVAVGQMA-QTIYVPAIADMARD---------LNVREGAVQAVM-AAYLLTYGLSQLFYGPLSDRVGRRPV 75 (394)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhccHHHHHHH---------hCCCHHHHHHHH-HHHHHHHHHHHHhhhhHHHhcCChHH
Confidence 34444444444433322 22233345666555 456665555554 55678899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHH
Q 004673 595 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICD 674 (738)
Q Consensus 595 l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~ 674 (738)
++.+..+.+++.++....... +...+..++..++.+ ...+....++.|.++.+.++.+.++.++...++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~---------~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (394)
T PRK11652 76 ILVGMSIFILGTLVALFAHSL---------TVLIAASAIQGLGTG-VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSP 145 (394)
T ss_pred HHHHHHHHHHHHHHHHHHccH---------HHHHHHHHHHHhhhh-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999888777777665443211 122222222222222 2234455677888998999999999999999999
Q ss_pred HHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCC
Q 004673 675 IIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 717 (738)
Q Consensus 675 ~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 717 (738)
.++|.+.+.+.+..||+..|++.++++++..++..++.||++.
T Consensus 146 ~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 146 LLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 9999999999888899999998887777766666667788654
No 168
>PRK09952 shikimate transporter; Provisional
Probab=99.13 E-value=6.4e-09 Score=116.56 Aligned_cols=157 Identities=12% Similarity=0.106 Sum_probs=113.3
Q ss_pred HHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---h-hhHHHHHHHHHHHH
Q 004673 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW---S-PNVYVLCIARLLDG 105 (738)
Q Consensus 30 p~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af---a-~~~~~liI~r~l~G 105 (738)
+++.+++|++......+..+..+...++.++.|+++||+|||+++.++.++.+++.+.... . ++...+++..++.|
T Consensus 275 ~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (438)
T PRK09952 275 NYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLAN 354 (438)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 3456778998876666666667777888899999999999999999887776665543332 1 23445555677778
Q ss_pred HHHhhhhhhHHHHHhhcCCcchhhhhchHhHHH-hhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhccc
Q 004673 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFT-GSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (738)
Q Consensus 106 ~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~-~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flp 184 (738)
++.+...+...+++.|.+|++.|+.+.++.... ..+|..+++.+..........+|+..+.+.++.+++.++. .+.++
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~-~~~~~ 433 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT-ALLMK 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH-HHHcc
Confidence 888888888899999999999999888885443 4477777755554443323346999888888777776544 45567
Q ss_pred CCc
Q 004673 185 ESP 187 (738)
Q Consensus 185 ESp 187 (738)
|++
T Consensus 434 ~~~ 436 (438)
T PRK09952 434 DNQ 436 (438)
T ss_pred ccc
Confidence 763
No 169
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.12 E-value=8.2e-10 Score=100.30 Aligned_cols=135 Identities=16% Similarity=0.223 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhh
Q 004673 571 TTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILC 650 (738)
Q Consensus 571 ~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (738)
..++.+++.++.+++.||+|||+.+..+..+..++.+.+..... .+....+.++...+.+ ...+..+.+.
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~-~~~~~~~~~~ 76 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN---------ITVLIIARFLQGFGAA-FALVAGAALI 76 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc---------HHHHHHHHHHHHHHHH-HHHHhHHHHH
Confidence 45677788999999999999999999888777777666554321 1222233333333333 2345566788
Q ss_pred cccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 651 AEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 651 ~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
.|.+|++.|+.+.++.++...++..+++.+.+.+.+..+|+..|.+.+.++++..+..++..||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999999999999888998899988888888888777777764
No 170
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.12 E-value=2.1e-09 Score=123.23 Aligned_cols=175 Identities=19% Similarity=0.170 Sum_probs=121.7
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhcc-chhHH
Q 004673 516 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-GRRKL 594 (738)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-grr~~ 594 (738)
+.+...+...+...+ .++++..++|.++.+ .+|++........ ........++.+++|+++||+ |||+.
T Consensus 9 ~~l~~l~~~~~~e~f-s~Yg~~~~L~~yL~~--------~lgls~~~a~~i~-~~~~~~~~l~~ligG~LaDRilGrrr~ 78 (493)
T PRK15462 9 RAIYYVVALQIWEYF-SFYGMRALLILYLTN--------QLKYDDNHAYELF-SAYCSLVYVTPILGGFLADKVLGNRMA 78 (493)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------hcCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence 444555555555444 456677888888876 3567765555554 555677788999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCccc--chhhhhHHHHHhhhH
Q 004673 595 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK--VRGICIAICAMAYWI 672 (738)
Q Consensus 595 l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~gi~~~~~~i 672 (738)
++.+..+.+++.+++....... ......+.+..++.+. ..+...++++|.+|++ .|..++++..+..++
T Consensus 79 iliG~il~~lg~lll~~~~~~~--------~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl 149 (493)
T PRK15462 79 VMLGALLMAIGHVVLGASEIHP--------SFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV 149 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcch--------hHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHH
Confidence 9999988888876554321100 1111122222222222 2344457889999986 799999999999999
Q ss_pred HHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 004673 673 CDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVF 709 (738)
Q Consensus 673 ~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 709 (738)
|+.++|.+++.+.+..||+..|.+.++..+++.+..+
T Consensus 150 G~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 150 GSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999886655555544443
No 171
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.11 E-value=1.6e-09 Score=120.91 Aligned_cols=153 Identities=13% Similarity=0.066 Sum_probs=108.3
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHH
Q 004673 557 GISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFC 636 (738)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 636 (738)
|++..+.+... ....++..++.++.|+++||+|||+.++.+..+.+++.+++....... .......+..++..+
T Consensus 57 g~s~~~~g~~~-~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l~g~ 130 (438)
T TIGR00712 57 GFSKGELGFAL-SAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWAT-----SSIAIMFVLLFLNGW 130 (438)
T ss_pred CCCHhHhHHHH-HHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccccc-----chHHHHHHHHHHHHH
Confidence 45665555554 556788999999999999999999999988888777766654432110 011111222222233
Q ss_pred HhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHH-hhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 637 CFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS-SIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 637 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
+.+..+ +.....+.|.+|++.|+.+.|+.++...+++.+++.+.+.... ..||+..|++.++++++..++.++++||+
T Consensus 131 ~~g~~~-~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 131 FQGMGW-PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred Hhhcch-HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 333332 3344677899999999999999999999999999988876554 46899999998888888777777777765
Q ss_pred C
Q 004673 716 K 716 (738)
Q Consensus 716 ~ 716 (738)
+
T Consensus 210 ~ 210 (438)
T TIGR00712 210 P 210 (438)
T ss_pred H
Confidence 3
No 172
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.11 E-value=2.2e-09 Score=120.72 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=119.2
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 004673 521 GVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIP 600 (738)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~ 600 (738)
.+.+..+.............|.+.++ +|++....+.+.+. ..++.+++.++.|+++||+|||+.++.+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~i~~~---------~~~s~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 24 AAWLGYLLDGFDFVLITLVLTEVQGE---------FGLTTVQAASLISA-AFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------hCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 33343333333444455566666655 45666566665544 568888999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhh
Q 004673 601 VLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYT 680 (738)
Q Consensus 601 ~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~ 680 (738)
+.+++.+++.+..... ...+..++.+++ ..+..+....++.|.+|.+.|+.+.++......+|..+++.+
T Consensus 94 ~~~~~~~~~~~~~~~~---------~l~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 163 (496)
T PRK03893 94 LFSVGTLACGFAPGYW---------TLFIARLVIGMG-MAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQV 163 (496)
T ss_pred HHHHHHHHHHHHhHHH---------HHHHHHHHHHHH-HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877776543222 222222222222 223344455778999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCC
Q 004673 681 LPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 681 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 716 (738)
.+.+.+..||++.|++.++.+ +..++.....||++
T Consensus 164 ~~~l~~~~~w~~~f~~~~~~~-~~~~~~~~~~p~~~ 198 (496)
T PRK03893 164 YSLVVPVWGWRALFFIGILPI-IFALWLRKNLPEAE 198 (496)
T ss_pred HHHHhccCCHHHHHHHHHHHH-HHHHHHHHhCCCch
Confidence 999999999998887643333 33333344456643
No 173
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.10 E-value=1.6e-09 Score=119.28 Aligned_cols=162 Identities=15% Similarity=0.064 Sum_probs=113.7
Q ss_pred hhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHH
Q 004673 534 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 613 (738)
Q Consensus 534 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~ 613 (738)
..+...+|.+.++ +|++..+.+.+. ....++..++.+..|+++||+|||+++.......+++.+......
T Consensus 8 ~~~~~~lp~i~~~---------~~~s~~~~g~~~-s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 77 (368)
T TIGR00903 8 VTFSPVLSLVAED---------IDVSKEELGLLA-ITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF 77 (368)
T ss_pred HHHHhhHHHHHHH---------hCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc
Confidence 3355666777666 456665655554 456688899999999999999999887655444433322111101
Q ss_pred HhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhH
Q 004673 614 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 693 (738)
Q Consensus 614 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~ 693 (738)
+.....++-++.+.+.+ .........+|.+|++.|+++.++..+...+|..+++.+.+.+.+..||+..
T Consensus 78 ---------~~~~l~~~R~l~G~g~~--~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~ 146 (368)
T TIGR00903 78 ---------NYEWLLACQLLAALGQP--FLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLL 146 (368)
T ss_pred ---------cHHHHHHHHHHHHhHhH--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 11222222333222222 2233335558999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCC
Q 004673 694 FGVYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~e~~ 716 (738)
|.+.++++++.+++.++++||..
T Consensus 147 f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 147 IIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCC
Confidence 99988888888888888888864
No 174
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.10 E-value=2.7e-09 Score=118.16 Aligned_cols=164 Identities=13% Similarity=0.102 Sum_probs=117.9
Q ss_pred hhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 004673 532 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 611 (738)
Q Consensus 532 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~ 611 (738)
+.+.+..+++.++++ .+|.+....+.... ...+...+..+++|+++||+|||+.+..+..+.+++++.+..
T Consensus 25 ~~~~~~~~~~~~~~~--------~~g~s~~~~gl~~~-~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 25 GFFVVFPLISIRFVD--------QLGWAAVMVGIALG-LRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHH--------HhCCcHHHHHHHHH-HHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 344455566655543 35666656655554 456777777899999999999999999999988888877655
Q ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcch
Q 004673 612 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 691 (738)
Q Consensus 612 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~ 691 (738)
... .+...+..++..++ .....+....++.|.+|++.|+.+.|+......+|..++|.+.+.+. ..||+
T Consensus 96 ~~~---------~~~l~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~ 164 (400)
T PRK11646 96 AHE---------PWLLWLSCILSGLG-GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFR 164 (400)
T ss_pred hcc---------HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHH
Confidence 321 11222222222222 22334555577889999999999999999999999999999999998 67999
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCC
Q 004673 692 GAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
+.|++.++++++..++..++.||.
T Consensus 165 ~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 165 LVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999988887777766666666764
No 175
>PRK03699 putative transporter; Provisional
Probab=99.08 E-value=6.3e-09 Score=114.37 Aligned_cols=163 Identities=15% Similarity=0.054 Sum_probs=128.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHH-HhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q 004673 13 IGNFLQGWDNATIAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (738)
Q Consensus 13 L~~~~~g~~~~~~~~~lp~L~-~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa 91 (738)
++.++.......+....|.+. +.+|++..+.+++.+.+.++..++.++.|+++||+++|+++.....+.++..++..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~ 291 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT 291 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc
Confidence 333443334444445566544 6789999999999999999999999999999999999999998888888777777777
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHH
Q 004673 92 PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIP 171 (738)
Q Consensus 92 ~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail 171 (738)
+|...+.+..++.|++.+..++...++..+..|.+ +++..++......+|..+++.+. ....+..||+..+++.+++
T Consensus 292 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~--G~l~~~~g~~~~~~~~~~~ 368 (394)
T PRK03699 292 DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVT--SPIVAHFGLQAALLTANGL 368 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHH--HHHHHHhCchhhhhhhHHH
Confidence 88877778889999988888888888888877644 67788888888899999985444 4445567899999988887
Q ss_pred HHHHHHH
Q 004673 172 ALLYFAF 178 (738)
Q Consensus 172 ~~~~~~~ 178 (738)
.++.++.
T Consensus 369 ~~~~~~~ 375 (394)
T PRK03699 369 YAVVFVM 375 (394)
T ss_pred HHHHHHH
Confidence 7776544
No 176
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.08 E-value=1.1e-08 Score=112.91 Aligned_cols=161 Identities=12% Similarity=0.053 Sum_probs=119.7
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHH-HHHHHHHHHHHHHHh--
Q 004673 14 GNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSGLVMLW-- 90 (738)
Q Consensus 14 ~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~Ll-iglvI~aI~s~~~af-- 90 (738)
..++.......+....|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...+
T Consensus 230 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~ 309 (402)
T TIGR00897 230 VRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIP 309 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444555678777889999999999999999999999999999999999988764 333334443333322
Q ss_pred ---hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHH
Q 004673 91 ---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (738)
Q Consensus 91 ---a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I 167 (738)
.++++.+++..++.|++.+...+ ....+.|..| ++||++.++.+....+|..+++.+. ....+..||+.++++
T Consensus 310 ~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~--g~l~~~~g~~~~~~~ 385 (402)
T TIGR00897 310 QHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIA--VLFIGFFGAIGVVWI 385 (402)
T ss_pred HccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHH--HHHHhhcchHHHHHH
Confidence 24667777889999998887655 4456677655 5799999999999999999985544 444566799999999
Q ss_pred HHHHHHHHHHH
Q 004673 168 LSIPALLYFAF 178 (738)
Q Consensus 168 ~ail~~~~~~~ 178 (738)
.+++.++..++
T Consensus 386 ~a~~~~i~~~~ 396 (402)
T TIGR00897 386 FAALYVVSAFL 396 (402)
T ss_pred HHHHHHHHHHH
Confidence 98887765544
No 177
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.08 E-value=1.5e-09 Score=122.30 Aligned_cols=161 Identities=9% Similarity=0.003 Sum_probs=124.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhh--CChHHHH--HHHHHHHHHHHHHHh
Q 004673 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--GRRPMLI--LSSVLYFVSGLVMLW 90 (738)
Q Consensus 15 ~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf--GRR~~Ll--iglvI~aI~s~~~af 90 (738)
.++...........+|.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+... ++.++.+++.++..+
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 329 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL 329 (455)
T ss_pred HHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333334455666678999999999999999999999999999999984 3343333 344444555666677
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccc-hhHHHHHHHH
Q 004673 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLMLGVLS 169 (738)
Q Consensus 91 a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~-~Wr~~~~I~a 169 (738)
.++++.+++.+++.|++.+...+...+++.|.+|++++|++.+++++...+|.++++.+. ....+.. +|+..|++.+
T Consensus 330 ~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~--G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 330 AGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA--GRLVDATKNYKYIFYASG 407 (455)
T ss_pred hchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce--eeeehhcCCcchHHHHhh
Confidence 889999999999999999999999999999999999999999999999999999995443 3334444 6999999988
Q ss_pred HHHHHHHH
Q 004673 170 IPALLYFA 177 (738)
Q Consensus 170 il~~~~~~ 177 (738)
++.++..+
T Consensus 408 ~~~li~~~ 415 (455)
T TIGR00892 408 SIVVSAGL 415 (455)
T ss_pred HHHHHHHH
Confidence 87766543
No 178
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.07 E-value=1.9e-07 Score=104.42 Aligned_cols=159 Identities=15% Similarity=0.205 Sum_probs=130.6
Q ss_pred HHHHHHHh-hCCChhHHH-HHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 004673 28 AIVYIKKD-LNLGTTVEG-LVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDG 105 (738)
Q Consensus 28 ~lp~L~~d-fGlS~s~iG-Li~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G 105 (738)
..|++.+. .|++..++. -+.-+..-.+.+..++...++|..+.|++++++.+...+..++..+.+++..+-+..++-|
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG 105 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 45666665 789887775 3556666678888899999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccC
Q 004673 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (738)
Q Consensus 106 ~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpE 185 (738)
++.+.. .+.++|+-...|+++--++.+...+..-+|..++.+++-........+++..+++......+.+ ++.+++|.
T Consensus 106 ~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fLP~ 183 (412)
T PF01770_consen 106 LATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFLPM 183 (412)
T ss_pred HHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHcCC
Confidence 998875 6788999999999988899999999999999999888777766667788888777665444444 44567777
Q ss_pred Cch
Q 004673 186 SPR 188 (738)
Q Consensus 186 Sp~ 188 (738)
.++
T Consensus 184 ~~~ 186 (412)
T PF01770_consen 184 PKR 186 (412)
T ss_pred CCc
Confidence 654
No 179
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.06 E-value=4.5e-09 Score=119.64 Aligned_cols=161 Identities=17% Similarity=0.118 Sum_probs=116.9
Q ss_pred hhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHH
Q 004673 530 FSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-AGRRKLLLTTIPVLIVSLII 608 (738)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~grr~~l~~~~~~~~v~~~~ 608 (738)
-.+++++..++|.++.+.+ .+|++....+... ....+...++.+++|+++|| +|||+.++++..+.+++.++
T Consensus 23 ~~~~~~~~~~L~~yl~~~~------~lg~s~~~ag~~~-~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~ 95 (475)
T TIGR00924 23 RFSYYGMQGILAVYLVQQA------GLGFSQEQAFIIF-GAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFM 95 (475)
T ss_pred HHHHHHHHHHHHHHHHhCC------CCCCCHHHHHHHH-HHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 3346667788888876621 1567766666665 44568888999999999999 89999999999999888877
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccc---hhhhhHHHHHhhhHHHHHHhhhHHHHH
Q 004673 609 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV---RGICIAICAMAYWICDIIVTYTLPVML 685 (738)
Q Consensus 609 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---r~~~~gi~~~~~~i~~~i~~~~~~~~~ 685 (738)
+.+..... ...+...+.. .......+....+.++.+|++. |+.+.++.+...++|.+++|.+++.+.
T Consensus 96 ~~~~~~~~---------~~~~~~~l~g-~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 96 LAMSIYPD---------LIFYGLGTIA-VGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred HHhcccHh---------HHHHHHHHHH-hccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 76532211 1122222222 2222344566688889998764 888999999999999999999999999
Q ss_pred HhhcchhHHHHHHHHHHHHHHH
Q 004673 686 SSIGLAGAFGVYAVVCFISWVF 707 (738)
Q Consensus 686 ~~~g~~~~~~~~~~~~~~~~~~ 707 (738)
+..||+..|.+.++.++++.++
T Consensus 166 ~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 166 ENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HhcChHHHHHHHHHHHHHHHHH
Confidence 9999999998877655555433
No 180
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.05 E-value=3.9e-09 Score=117.05 Aligned_cols=185 Identities=15% Similarity=0.139 Sum_probs=140.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH
Q 004673 516 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 595 (738)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l 595 (738)
.+.++++.+........-..+.+-.|.+.++. |+|.++.+.+.+. ..+..-++-++.|.++||.+.|..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~---------~lsk~~lG~i~s~-f~i~YG~sKf~~G~~sDr~npr~fm 97 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDG---------GLSKTQLGILGSA-FSITYGVSKFVMGVLSDRSNPRYFM 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhc---------CCCHHHHHHHHHH-HHHHHHHHHHHhhhhcccCCCceee
Confidence 44555555554444334455666667777764 4566666666554 5688888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHH
Q 004673 596 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 675 (738)
Q Consensus 596 ~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~ 675 (738)
.++++++++..+++.++.... +..++..+-+.+-+.++.|.. -.++.-+|++.||+..++-|+++++|+.
T Consensus 98 ~~gLilsai~nil~Gfs~s~~---------~~~~l~~lng~fQg~Gwpp~~-~~i~~Wfsr~eRG~~~siWn~shNiGGa 167 (448)
T COG2271 98 AFGLILSAIVNILFGFSPSLF---------LFAVLWVLNGWFQGMGWPPCA-RTITHWFSRKERGTWWSIWNTSHNIGGA 167 (448)
T ss_pred hHHHHHHHHHHHHHhhhhHHH---------HHHHHHHHHHHHhcCCCcHHH-HHHHHHcCccccCceEEEehhhhhcccc
Confidence 999999999999888866433 333333333444444544444 6778999999999999999999999999
Q ss_pred HHhhhH--HHHHHhhcchhHHHHHHHHHHHHHHHHHHhcc---CCCCCCh
Q 004673 676 IVTYTL--PVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP---ETKGMPL 720 (738)
Q Consensus 676 i~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---e~~~~~l 720 (738)
+.|.+. +.+..+.+|+.+|++-++++++..++++++++ ++.|.+.
T Consensus 168 l~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ 217 (448)
T COG2271 168 LAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP 217 (448)
T ss_pred hHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC
Confidence 999999 88888889999999999999999888888874 5666653
No 181
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.05 E-value=1.2e-08 Score=112.47 Aligned_cols=163 Identities=18% Similarity=0.193 Sum_probs=124.5
Q ss_pred hHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-hhhHHHHHH
Q 004673 21 DNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-SPNVYVLCI 99 (738)
Q Consensus 21 ~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af-a~~~~~liI 99 (738)
....+....|.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|||+++.++..+.+++.++..+ ..+...+.
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~- 298 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW- 298 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH-
Confidence 3334444566666678999999999999999999999999999999999999999998888887766553 33332222
Q ss_pred HHHHHHHHHhhhhhhHHHHHhhcCC-cchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHH
Q 004673 100 ARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 100 ~r~l~G~g~G~~~~~~~a~IaE~~P-~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~-~Wr~~~~I~ail~~~~~~ 177 (738)
-++.|++.+...+.......+..+ +++||++.++.+....++..+++...... .+.. +|...|.+.++.+++.++
T Consensus 299 -~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l--~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 299 -AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVL--RSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred -HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCCchHHHHHHHHHHHHHHH
Confidence 246788888888877777777774 67899999999999999988885554433 3333 588889888888887777
Q ss_pred HHhhcccCCc
Q 004673 178 FAVFFLPESP 187 (738)
Q Consensus 178 ~i~~flpESp 187 (738)
....+.||++
T Consensus 376 ~~~~~~~~~~ 385 (393)
T PRK09705 376 ITLRFAPARF 385 (393)
T ss_pred HHHHhccccc
Confidence 7677888873
No 182
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.03 E-value=8.3e-09 Score=117.55 Aligned_cols=158 Identities=15% Similarity=0.157 Sum_probs=105.7
Q ss_pred HHHHHHHhhCCChhHHHH------------HHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhh--
Q 004673 28 AIVYIKKDLNLGTTVEGL------------VVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPN-- 93 (738)
Q Consensus 28 ~lp~L~~dfGlS~s~iGL------------i~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~-- 93 (738)
..|.+.++.|.+....+. ...+..++..++.+++++++||+|||++++++.++.+++.++.++..+
T Consensus 310 ~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~ 389 (502)
T TIGR00887 310 NQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL 389 (502)
T ss_pred ccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 457777788876542111 233444566678889999999999999999998888877766665321
Q ss_pred --HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhc--------cchhHH
Q 004673 94 --VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA--------SPSWRL 163 (738)
Q Consensus 94 --~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~--------~~~Wr~ 163 (738)
...+.+.-+...++.....+....+..|.+|.+.|+++.++.+....+|.++++.......... ..++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 469 (502)
T TIGR00887 390 STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGH 469 (502)
T ss_pred chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchH
Confidence 1122222122222222234566778899999999999999999999999999865544332211 235567
Q ss_pred HHHHHHHHHHHHHHHHhhcccCC
Q 004673 164 MLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 164 ~~~I~ail~~~~~~~i~~flpES 186 (738)
.|++.++++++.+++ ++++||+
T Consensus 470 ~~~i~~~~~~~~~i~-~~~lpEt 491 (502)
T TIGR00887 470 VLEIFALFMFLGILF-TLLIPET 491 (502)
T ss_pred HHHHHHHHHHHHHHH-heEeccC
Confidence 788888887776554 5788998
No 183
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.03 E-value=7.5e-09 Score=118.45 Aligned_cols=176 Identities=16% Similarity=0.206 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhH
Q 004673 515 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-AGRRK 593 (738)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~grr~ 593 (738)
+|.+++.+...+...++ ++++..+++.++.+ .+|++........+. .........+++|+++|| +||||
T Consensus 13 p~~~~~~~~~~~~er~~-~y~~~~~l~~yl~~--------~lg~~~~~a~~i~~~-~~~~~~~~~~~~G~laDr~~G~r~ 82 (489)
T PRK10207 13 PRPFFMIFFVELWERFG-YYGVQGILAVFFVK--------QLGFSQEQAFITFGA-FAALVYGLISIGGYVGDHLLGTKR 82 (489)
T ss_pred ChhHHHHHHHHHHHHHH-HHHHHHHHHHHHHH--------HcCCCHHHHHHHHHH-HHHHHHHHHhhHHHhhhhccchHH
Confidence 35556666666555554 55566666666655 356666565555544 344455566789999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccc--hhhhhHHHHHhhh
Q 004673 594 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV--RGICIAICAMAYW 671 (738)
Q Consensus 594 ~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~ 671 (738)
+++.+..+.+++.+.+.+..... ....+...+. ........+....+++|.+|++. |+.++++..+..+
T Consensus 83 ~~~~g~~~~~~g~~~~~~~~~~~--------~ll~~~~~l~-~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~n 153 (489)
T PRK10207 83 TIVLGAIVLAIGYFMTGMSLLKP--------DLIFIALGTI-AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSIN 153 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhccch--------hHHHHHHHHH-HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHH
Confidence 99999999999888877643211 1111222222 22223344555688899999884 4778999999999
Q ss_pred HHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 004673 672 ICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 710 (738)
Q Consensus 672 i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 710 (738)
+|.+++|.++|++.+..||++.|++..+ +++..++.+.
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~ 191 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYF 191 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999987544 3443333333
No 184
>PRK11043 putative transporter; Provisional
Probab=99.03 E-value=1.1e-08 Score=112.26 Aligned_cols=148 Identities=11% Similarity=0.076 Sum_probs=106.8
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 634 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 634 (738)
++|+++.+.+... .+..++..++.++.|+++||+|||+.++.+..+..++.+++....... ..++..++.
T Consensus 35 ~~~~s~~~~g~~~-s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~~~l~ 104 (401)
T PRK11043 35 DLQTSASAVSASL-SLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAA---------QLLVLRFVQ 104 (401)
T ss_pred HHCCCHHHHHHHH-HHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHH
Confidence 3567766665555 456788889999999999999999999998888777776665532211 222222222
Q ss_pred HHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccC
Q 004673 635 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPE 714 (738)
Q Consensus 635 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e 714 (738)
+.+.+ ...+....+..|.+|++.++...+..+....++..++|.+.+.+.+..||+..|++.+++.++..++.+. ++|
T Consensus 105 G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 182 (401)
T PRK11043 105 AVGVC-SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR-LKP 182 (401)
T ss_pred HhhhH-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 22222 2223344677899999999999999888899999999999999999999999998888777776655544 443
No 185
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.99 E-value=2.7e-08 Score=109.22 Aligned_cols=143 Identities=20% Similarity=0.259 Sum_probs=119.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHH
Q 004673 37 NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVP 116 (738)
Q Consensus 37 GlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~ 116 (738)
+.+....|.+.++..+...++.++.|++.||+|+|+++.++.++.+++.++..+++|.+.+++.+++.|++.+.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999999999999888888888999999999999999887777777
Q ss_pred HHHhhcCCcchhhhhchH-hHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhh
Q 004673 117 LYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVF 181 (738)
Q Consensus 117 a~IaE~~P~k~Rg~~~~~-~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~ 181 (738)
.++.+..+++.++...+. .++...+|.++++.+. +...+..||+.+|.+.+++.++..+...+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~--G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLA--GNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhH--HHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 788888888888887766 6778888998885444 44455669999999999888776655444
No 186
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.99 E-value=1.3e-08 Score=126.32 Aligned_cols=155 Identities=21% Similarity=0.235 Sum_probs=127.4
Q ss_pred HHHHHhhCCChh-HHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004673 30 VYIKKDLNLGTT-VEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGV 108 (738)
Q Consensus 30 p~L~~dfGlS~s-~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~ 108 (738)
+++.+.+|++.. ..+++.++..++..++.+++|+++||+++|+++.++.++.+++.++..+..+++.++++.++.|++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 356677999998 9999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred hhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccC
Q 004673 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (738)
Q Consensus 109 G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpE 185 (738)
+...+...+++.+.+|++.||+++++.++...+|.+++..++..... ...++...|++.+.++++..++.++..|+
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLIGTLYTLLLLPD 412 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99989999999999999999999999999999998777555443322 23466677777666655544443444443
No 187
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.98 E-value=4.8e-08 Score=107.01 Aligned_cols=146 Identities=16% Similarity=0.121 Sum_probs=118.1
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 004673 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGF 106 (738)
Q Consensus 27 ~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~ 106 (738)
...|.+.++.|.+..+.|++.++..++..+..++.|++.||+|+|+++.++.++.+++.++.+++++.+.+++..++.|+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 33454557799999999999999999999999999999999999999999999999998888889999999999999999
Q ss_pred HHhhhhhhHHHHHhhcCCcchhhhhchHhH-HHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 004673 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (738)
Q Consensus 107 g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~-~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~ 176 (738)
+.+...+....++.+. ++.+++++.++.. ....+|..+++.+ ++...+..++ ..+++.++++++.+
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i--~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 306 TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVL--SGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhccH-HHHHHHHHHHHHHH
Confidence 9999889988998887 5666788888875 5556777777444 4444566677 46666666665543
No 188
>PRK15075 citrate-proton symporter; Provisional
Probab=98.98 E-value=5e-08 Score=108.93 Aligned_cols=142 Identities=19% Similarity=0.107 Sum_probs=97.1
Q ss_pred HHHhHHHHHHHHHHHHH-hhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH-HH---hhh
Q 004673 18 QGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV-ML---WSP 92 (738)
Q Consensus 18 ~g~~~~~~~~~lp~L~~-dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~-~a---fa~ 92 (738)
.......+....|.+.+ .+|++..+.+++...+.++..++.++.|+++||+|||+++.++..+..+..+. .. ..+
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444445555666554 58999999999999999999999999999999999999988775554332221 11 123
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHh-hhhhHhhHHHHHHHHHhccchh
Q 004673 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTG-SGGMFLAYCMVFGMSLLASPSW 161 (738)
Q Consensus 93 ~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~-~~G~~I~~~~~~~l~l~~~~~W 161 (738)
++..+.+..++.|++.+...+....++.|.+|++.|+.+.++..... .++..+++.+ .....+..|+
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~--~g~i~~~~g~ 397 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAI--STWLIHVTGD 397 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHH--HHHHHHhcCC
Confidence 44445555666777777777777789999999999999999864433 3345555333 3333444454
No 189
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=3.8e-08 Score=112.02 Aligned_cols=188 Identities=13% Similarity=0.055 Sum_probs=123.8
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 004673 514 VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRK 593 (738)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~ 593 (738)
.-|+.++...+.+...|.....+....+.+-+. ++|+|..+.+.+.++ ..+...++.+..|++.||+|.|+
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~--------~~~ls~~q~g~l~ai-~~l~~al~rip~G~l~Dr~G~R~ 101 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKI--------GFNFTTDQLFLLTAL-PSVSGALLRVPYSFMVPIFGGRR 101 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------hcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChH
Confidence 334566666666665555444444433433331 477888777766655 45677778888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHH
Q 004673 594 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWIC 673 (738)
Q Consensus 594 ~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~ 673 (738)
++.+++.+..+..+.+.+..... ..+....+++-++.++ +.+..+.....+++.+|++.||.+.|+.....++|
T Consensus 102 v~~~~~ll~~i~~~~~~~a~~~~----~~s~~~lli~r~l~Gi--gg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G 175 (462)
T PRK15034 102 WTVFSTAILIIPCVWLGIAVQNP----NTPFGIFIVIALLCGF--AGANFASSMGNISFFFPKAKQGSALGINGGLGNLG 175 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHccc----CCCHHHHHHHHHHHHH--HHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhH
Confidence 99999888887777666531100 0111222222222222 23344555577899999999999999998888888
Q ss_pred HHHHhhhHHHHH-----H-------------hhcchhHHHHHHHHHHHHHHHHHHhccCCC
Q 004673 674 DIIVTYTLPVML-----S-------------SIGLAGAFGVYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 674 ~~i~~~~~~~~~-----~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 716 (738)
..+++++.+.++ . ..+++++++++.++.++..++.++++++.+
T Consensus 176 ~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~ 236 (462)
T PRK15034 176 VSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIA 236 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 888877777644 2 334777778888888888878777776644
No 190
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.96 E-value=2.9e-08 Score=109.57 Aligned_cols=130 Identities=17% Similarity=0.227 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHH
Q 004673 23 ATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-PNVYVLCIA 100 (738)
Q Consensus 23 ~~~~~~lp~L~~d-fGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa-~~~~~liI~ 100 (738)
.......+++.++ ++ +....+++.++..++..++.+++++++||+|+|+++.++.++.+++.++..+. .+.+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (437)
T TIGR00792 239 NIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVL 317 (437)
T ss_pred HHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHH
Confidence 3333334444433 34 56677788888899999999999999999999999999999988888777765 466777788
Q ss_pred HHHHHHHHhhhhhhHHHHHhhcCC-------cchhhhhchHhHHHhhhhhHhhHHHHHHH
Q 004673 101 RLLDGFGVGLAVTLVPLYISETAP-------SEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 101 r~l~G~g~G~~~~~~~a~IaE~~P-------~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l 153 (738)
.++.|++.+...+...++++|..+ ++++|.+.++.++...+|..+++.+....
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 318 IILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999875 45679999999999999999886555443
No 191
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.95 E-value=4.4e-07 Score=99.46 Aligned_cols=159 Identities=17% Similarity=0.172 Sum_probs=107.3
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 004673 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGF 106 (738)
Q Consensus 27 ~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~ 106 (738)
|..-.+-+++|++..+++.+....+...++.+++.|.++||+|||+.-++..++++++++. -..++++.|+++|++.|+
T Consensus 55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 55 PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHH
Confidence 3333455789999999999999999999999999999999999999999999999999964 445899999999999999
Q ss_pred HHhhhhhhHHHHH-hhcC----CcchhhhhchHhHHHhh-hhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHh
Q 004673 107 GVGLAVTLVPLYI-SETA----PSEIRGRLNTLPQFTGS-GGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (738)
Q Consensus 107 g~G~~~~~~~a~I-aE~~----P~k~Rg~~~~~~~~~~~-~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~ 180 (738)
+....+++--+++ .|.- |++..+...+...+..+ +-++++.++.-........|-..+|....++.++..+++.
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 9999988877654 3432 22222222221111111 1112222222122111222346778777777666666655
Q ss_pred hcccCC
Q 004673 181 FFLPES 186 (738)
Q Consensus 181 ~flpES 186 (738)
...+|.
T Consensus 214 ~~W~EN 219 (354)
T PF05631_consen 214 KTWPEN 219 (354)
T ss_pred hccccc
Confidence 555555
No 192
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.92 E-value=3.4e-08 Score=123.11 Aligned_cols=147 Identities=14% Similarity=0.026 Sum_probs=99.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhh
Q 004673 562 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 641 (738)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 641 (738)
....+...+..+..++..+++|+++||+|||+++.....+.++...+........ ..+. ++...+........
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~------s~~~-l~~~~~l~gi~~a~ 124 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLN------SVPL-LFAALFLMGIHSAL 124 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHh------hHHH-HHHHHHHHHHHHHh
Confidence 3445555566788888999999999999999986443222222222111111101 1122 22333333344455
Q ss_pred cCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCC
Q 004673 642 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 716 (738)
Q Consensus 642 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 716 (738)
+.|....++.+++|.+.|+.++|+.++...+|.+++|.++++++...||+..| +..+++.+..+++++++|+++
T Consensus 125 ~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 125 FGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred hchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 67788899999999999999999999999999999999999999999998877 444444444455556666653
No 193
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.92 E-value=1.1e-08 Score=114.92 Aligned_cols=151 Identities=11% Similarity=0.022 Sum_probs=111.8
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 634 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 634 (738)
+++++....+.+.+. ..++.+++.+++|+++||+|||+.+..+..+..++.++........ ... ++..-+.
T Consensus 70 ~~~~s~~~~g~~~s~-~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~-------~~~-l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSGALQGLILSS-HFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG-------IAL-VVFCRVI 140 (465)
T ss_pred CCCCCHHHhhHHHHH-HHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC-------chH-HHHHHHH
Confidence 467887666666654 5689999999999999999999999998887777766554332111 111 2222222
Q ss_pred HHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHhcc
Q 004673 635 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS-IGLAGAFGVYAVVCFISWVFVFLRVP 713 (738)
Q Consensus 635 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 713 (738)
.........+....+++|.+|++.|+.+.|+......+|.++++.+.+.+.+. .||+..|.+.++++++..++.+.+.+
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence 22333344556668889999999999999999999999999999999999988 49999999888877766665555554
Q ss_pred C
Q 004673 714 E 714 (738)
Q Consensus 714 e 714 (738)
+
T Consensus 221 ~ 221 (465)
T TIGR00894 221 D 221 (465)
T ss_pred C
Confidence 4
No 194
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.92 E-value=4.9e-08 Score=111.93 Aligned_cols=170 Identities=18% Similarity=0.233 Sum_probs=112.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHH
Q 004673 516 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-AGRRKL 594 (738)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~grr~~ 594 (738)
+.++..+...++..+ +++.+..+++.++.+ .+|++........... ........+++|+++|| +|||+.
T Consensus 21 ~~~~~~~~~~~~~~~-~~y~~~~~l~~yl~~--------~lg~s~~~a~~~~~~~-~~~~~~~~~~~G~LaDr~~G~r~~ 90 (500)
T PRK09584 21 KAFYLIFSIELWERF-GYYGLQGIMAVYLVK--------QLGMSEADSITLFSSF-SALVYGLVAIGGWLGDKVLGTKRV 90 (500)
T ss_pred chHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccchHHH
Confidence 445555555555444 455577777777755 3667665555554443 33333445689999999 599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccc--hhhhhHHHHHhhhH
Q 004673 595 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV--RGICIAICAMAYWI 672 (738)
Q Consensus 595 l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~i 672 (738)
++.+..+.+++.+++.+..... ....+...+..++.+ ...+....+++|.+|++. |..+.++.++..++
T Consensus 91 ~~~g~~~~~ig~~l~~~~~~~~--------~~l~~~~~l~gig~g-~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i 161 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWSGHDA--------GIVYMGMATIAVGNG-LFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI 161 (500)
T ss_pred HHHHHHHHHHHHHHHHHhcccH--------HHHHHHHHHHHHhhh-cccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH
Confidence 9999988888877766532111 111222222222222 234555578899998653 44578888999999
Q ss_pred HHHHHhhhHHHHHHhhcchhHHHHHHHHHHHH
Q 004673 673 CDIIVTYTLPVMLSSIGLAGAFGVYAVVCFIS 704 (738)
Q Consensus 673 ~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 704 (738)
|..++|.+.+++.+..||+..|.+.++..+++
T Consensus 162 G~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 162 GSFFSMLATPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 99999999999999999999998876544443
No 195
>TIGR00898 2A0119 cation transport protein.
Probab=98.91 E-value=3.2e-08 Score=111.99 Aligned_cols=147 Identities=24% Similarity=0.231 Sum_probs=113.3
Q ss_pred HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHh
Q 004673 32 IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV--YVLCIARLLDGFGVG 109 (738)
Q Consensus 32 L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~--~~liI~r~l~G~g~G 109 (738)
..++++.+.. +...+..+....+.++.+++.||+|||+++.++.++.+++.++..+.++. +..++.-++.+++.+
T Consensus 349 ~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (505)
T TIGR00898 349 DLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGIT 425 (505)
T ss_pred cccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence 3344555533 33334556677888899999999999999999999999998888776543 555566677788888
Q ss_pred hhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 110 LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 110 ~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
..++....+..|.+|++.|+.++++..+...+|.++++.+.. . ...++...+.+.++.+++..++ .+++||+
T Consensus 426 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~---~~~~~~~~~~~~~~~~~~~~~~-~~~lpet 497 (505)
T TIGR00898 426 SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L---GEKWLFLPLVLFGGLALLAGIL-TLFLPET 497 (505)
T ss_pred HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H---HHHHHhhHHHHHHHHHHHHHHH-HHcCcCC
Confidence 888888999999999999999999999999999999976554 2 2236677888888777775544 5678887
No 196
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.89 E-value=9.6e-08 Score=110.51 Aligned_cols=151 Identities=23% Similarity=0.224 Sum_probs=131.1
Q ss_pred HHHHHHHHH-HhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 004673 25 IAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (738)
Q Consensus 25 ~~~~lp~L~-~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l 103 (738)
+...+|.+. +.+|.+...+|++.+++.+|..+++++.+++.+|+++++++..+.++++++.++.+++++.+..+++-++
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l 316 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFL 316 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 334567665 5689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 004673 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 104 ~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~ 177 (738)
.|++.....+...+.+.+..|++.|||+++++++....+..+|..+. +...+..|-+..+.+.++..++..+
T Consensus 317 ~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~--G~la~~~g~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 317 AGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLW--GFLADHFGVRTALLIAGAALLLSAL 388 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 99999999889999999999999999999999999999988885543 4446667888888877765544443
No 197
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.88 E-value=1.3e-07 Score=94.20 Aligned_cols=164 Identities=26% Similarity=0.396 Sum_probs=130.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCh--hHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGT--TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~--s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~ 88 (738)
.....+....+........+.+..+++.+. ...+++.+.+.++..++.++.|.++||+|||+.+..+.....++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 86 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL 86 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH
Confidence 344445555677777778888888888776 589999999999999999999999999999999888887767777777
Q ss_pred Hhhhh--HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCc-chhhhhchHhHH-HhhhhhHhhHHHHHHHHHhccchhHHH
Q 004673 89 LWSPN--VYVLCIARLLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQF-TGSGGMFLAYCMVFGMSLLASPSWRLM 164 (738)
Q Consensus 89 afa~~--~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~-k~Rg~~~~~~~~-~~~~G~~I~~~~~~~l~l~~~~~Wr~~ 164 (738)
++..+ .+.+++.|++.|++.+...+...+++.|++|+ ++|+...+.... ...+|.++++............+||..
T Consensus 87 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 87 ALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred HhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 77766 89999999999999999999999999999998 678998888888 577888887644433322244589996
Q ss_pred HHHHHHHHHH
Q 004673 165 LGVLSIPALL 174 (738)
Q Consensus 165 ~~I~ail~~~ 174 (738)
|.+.......
T Consensus 167 ~~~~~~~~~~ 176 (338)
T COG0477 167 FLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHH
Confidence 6665555543
No 198
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.88 E-value=1.9e-07 Score=104.15 Aligned_cols=158 Identities=15% Similarity=0.103 Sum_probs=98.4
Q ss_pred HHHHHH-HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH--h--hhhHHHHHHH
Q 004673 26 AGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML--W--SPNVYVLCIA 100 (738)
Q Consensus 26 ~~~lp~-L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a--f--a~~~~~liI~ 100 (738)
...+|. +.+++|.+..+.++..++..++..+++++.|+++||+|||+++.++.++.++..+... . ..+....+..
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGL 342 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 344554 5567899999999999888888899999999999999999988877665444433221 1 1233322222
Q ss_pred HHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhh-hHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Q 004673 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGG-MFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFA 179 (738)
Q Consensus 101 r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G-~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i 179 (738)
-++.+++.+...+....++.|++|++.|+.+.++.+....+. ....+.+.. .......|...+++.++.+++.++.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~--~l~~~g~~~~~~~~~~~~~~i~~~~- 419 (432)
T PRK10406 343 VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL--SLKSIGMETAFFWYVTLMAVVAFLV- 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH--HHHHhCCCcHHHHHHHHHHHHHHHH-
Confidence 233334444444566788999999999999999987655542 222322222 2222223666666666666655444
Q ss_pred hhcccCC
Q 004673 180 VFFLPES 186 (738)
Q Consensus 180 ~~flpES 186 (738)
.+++++.
T Consensus 420 ~~~l~~~ 426 (432)
T PRK10406 420 SLMLHRK 426 (432)
T ss_pred HHHhhhc
Confidence 3344443
No 199
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.88 E-value=8.7e-08 Score=107.04 Aligned_cols=162 Identities=9% Similarity=0.023 Sum_probs=112.4
Q ss_pred hhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 004673 536 VLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETL 615 (738)
Q Consensus 536 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~ 615 (738)
.....|.+.++ +|++..+.+.+. ....++.+++.++.+++.||+|||+.++.+..+.+++.+++......
T Consensus 22 ~~~l~~~~~~~---------~~~s~~~~g~l~-s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~ 91 (410)
T TIGR00885 22 TNPMVPQFQQA---------FTLTAFQAALVQ-SAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI 91 (410)
T ss_pred HHHHHHHHHHH---------hCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34555666544 566665655555 55679999999999999999999999999999988887775443211
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHh--------
Q 004673 616 QLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS-------- 687 (738)
Q Consensus 616 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~-------- 687 (738)
. ..+..+...++.+++.+.. .+..+++..++.|++.|+...++.+....+|..+++.+.+.+...
T Consensus 92 ~------~~~~~l~~~~l~G~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 92 M------NYTLFLVGLFILTAGLGFL-ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred c------cHHHHHHHHHHHHhhHHHH-HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 1 1122222333333333332 334446778899999999999999999999999999999887532
Q ss_pred ------------------hcchhHHHHHHHHHHHHHHHHH-HhccC
Q 004673 688 ------------------IGLAGAFGVYAVVCFISWVFVF-LRVPE 714 (738)
Q Consensus 688 ------------------~g~~~~~~~~~~~~~~~~~~~~-~~~~e 714 (738)
.+|+.+|.+.++++++.+++.. ...|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~ 210 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPA 210 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3688889888877776655443 23554
No 200
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.88 E-value=4.3e-08 Score=108.76 Aligned_cols=150 Identities=19% Similarity=0.226 Sum_probs=124.2
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 634 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 634 (738)
.+|+|+.+...+. ++..+.+.+.+++-|.+.||+|.|+...+++.++++.++.+.+..+.. + .....++-.
T Consensus 43 ~~~LS~~q~~ll~-aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~------~--~~~ll~~gl 113 (417)
T COG2223 43 DFGLSEGQKGLLV-AIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYP------S--TWQLLVIGL 113 (417)
T ss_pred ccCCCHHHHHHHH-HHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCC------c--hHHHHHHHH
Confidence 4778876666665 555688888999999999999999999999999988888887765544 1 123444555
Q ss_pred HHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhc---chhHHHHHHHHHHHHHHHHHHh
Q 004673 635 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG---LAGAFGVYAVVCFISWVFVFLR 711 (738)
Q Consensus 635 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~ 711 (738)
.++++.+...+...+.++.+|++.+|.+.|+.. .+|+|..+...+.|.++...| |+.+..++.+..++..+..++.
T Consensus 114 l~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~ 192 (417)
T COG2223 114 LLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLG 192 (417)
T ss_pred HHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666777777788899999999999999999 999999999999999999999 9999999999999988888887
Q ss_pred ccC
Q 004673 712 VPE 714 (738)
Q Consensus 712 ~~e 714 (738)
+.+
T Consensus 193 ~~d 195 (417)
T COG2223 193 MND 195 (417)
T ss_pred hCC
Confidence 753
No 201
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.87 E-value=1.4e-07 Score=103.44 Aligned_cols=148 Identities=14% Similarity=-0.040 Sum_probs=111.1
Q ss_pred HHHHHHHhhCCChhHHHHHHHHHHH-HHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh------hhhHHHHHHH
Q 004673 28 AIVYIKKDLNLGTTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW------SPNVYVLCIA 100 (738)
Q Consensus 28 ~lp~L~~dfGlS~s~iGLi~Sl~~~-g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af------a~~~~~liI~ 100 (738)
..+.+.+|.|+++++.|++.....+ +..++.++.|++.||+|+|+++.++.++.++..++... .++...+...
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 4455556789999999999888764 66677899999999999999998887766443333221 1233444555
Q ss_pred HHHHHHHHhhhhhhHHHHHhhcCCc-chhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 004673 101 RLLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 101 r~l~G~g~G~~~~~~~a~IaE~~P~-k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~ 177 (738)
.++.+++.+...+...+++.+..++ +.+|+..++.+...++|..+++.+. +...+..||+..|.+.++++++..+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~--G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA--GYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHccHHHHHHHHHHHHHHHH
Confidence 6677777888878888887777776 7899999999999999999995554 4445666899999888877766543
No 202
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.87 E-value=1.8e-07 Score=107.16 Aligned_cols=174 Identities=20% Similarity=0.156 Sum_probs=139.3
Q ss_pred HHHHHHHHHHhH-HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCCh--HHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDN-ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRR--PMLILSSVLYFVSGLV 87 (738)
Q Consensus 11 l~L~~~~~g~~~-~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR--~~LliglvI~aI~s~~ 87 (738)
..+++++..-+. +++.....+..+++|++..+...+.-+..+..++|++++|++.||+|.| ++++++++++.+..+.
T Consensus 286 fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~ 365 (477)
T PF11700_consen 286 FLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLY 365 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 344444433333 3334445566679999999999999999999999999999999999999 8999999888776666
Q ss_pred HHh--------hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccc
Q 004673 88 MLW--------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (738)
Q Consensus 88 ~af--------a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~ 159 (738)
..+ .++-+.+.+.-++.|+..|..++...++.++..|+.+.+...+++.+..-....+|+++........ .
T Consensus 366 g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t-g 444 (477)
T PF11700_consen 366 GLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT-G 444 (477)
T ss_pred HHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C
Confidence 665 6788889999999999999999999999999999999999999999999999999977665554333 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 160 SWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 160 ~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
+-|+.+....++.++.+++ +++++..
T Consensus 445 ~~r~g~~~l~~lf~~gl~l-l~~v~~~ 470 (477)
T PF11700_consen 445 SQRYGFLFLLVLFLIGLIL-LFFVDVE 470 (477)
T ss_pred CchhHHHHHHHHHHHHHHH-Hhhccch
Confidence 5788888777777766544 4555544
No 203
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.85 E-value=2e-07 Score=106.68 Aligned_cols=156 Identities=12% Similarity=0.119 Sum_probs=116.9
Q ss_pred HHHHHHHhhCCChhHHHHHHH-HHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHH
Q 004673 28 AIVYIKKDLNLGTTVEGLVVA-MSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM---LWS-PNVYVLCIARL 102 (738)
Q Consensus 28 ~lp~L~~dfGlS~s~iGLi~S-l~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~---afa-~~~~~liI~r~ 102 (738)
..|++.+++|++..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++. ++. ++.+.+.+.-+
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 345666789999999999874 6668999999999999999999998887776655554333 232 45555555667
Q ss_pred HHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhc
Q 004673 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFF 182 (738)
Q Consensus 103 l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~f 182 (738)
+..+..|...+...++..+..+++.+++..++.+....+|.++++.+ .+...+..||+..|.+.++++++.+++. .+
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~--~G~l~~~~G~~~~f~~~~~~~l~~l~~~-~~ 401 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV--AGWFVEAHGWPTFYLFSVAAAVPGLLLL-LV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhChHHHHHHHHHHHHHHHHHH-HH
Confidence 76666666667778888899999999999999999999998876433 4444566699999999888888765543 33
Q ss_pred ccCC
Q 004673 183 LPES 186 (738)
Q Consensus 183 lpES 186 (738)
++++
T Consensus 402 ~~~~ 405 (491)
T PRK11010 402 CRQT 405 (491)
T ss_pred HHhc
Confidence 3443
No 204
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.80 E-value=2.3e-07 Score=97.78 Aligned_cols=177 Identities=17% Similarity=0.180 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH
Q 004673 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (738)
Q Consensus 5 ~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~ 84 (738)
|..+..........| ....++..-|.+++.+|+|.++...+.++..+|..+ +++.|.+.|++|++.++++|.+...+|
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred hhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 444444444444444 344556677899999999999999999999999987 588999999999999999999999999
Q ss_pred HHHHHhh-------hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhc
Q 004673 85 GLVMLWS-------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA 157 (738)
Q Consensus 85 s~~~afa-------~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~ 157 (738)
..+...+ .+++.+.+..++.|.+.+...+.......+.||. +||.+.++......++..+-..+.... ..
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~--f~ 156 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAF--FG 156 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHH--cC
Confidence 8888763 4788888889999998887777777777788885 699999999999999998864443333 22
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhcccCCc
Q 004673 158 SPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (738)
Q Consensus 158 ~~~Wr~~~~I~ail~~~~~~~i~~flpESp 187 (738)
...-+..+ ..+..+.+..+...++++..|
T Consensus 157 ~~~~~fll-~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 157 DDPSSFLL-FLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred CChHHHHH-HHHHHHHHHHHHHhhheeccC
Confidence 22333333 334433333334445555444
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.80 E-value=1.3e-07 Score=101.86 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=99.8
Q ss_pred HHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHH-HHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh------
Q 004673 19 GWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSL-IGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS------ 91 (738)
Q Consensus 19 g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~-~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa------ 91 (738)
...........|.+.+++|++..+.+.+.++.. ++..++.+++|++.||+|+|+.+.++.++.+++..+..+.
T Consensus 222 ~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (356)
T TIGR00901 222 KLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHH 301 (356)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 333334444556665669999999998887665 6788999999999999999999999888888877765543
Q ss_pred -----hhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhh
Q 004673 92 -----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGS 140 (738)
Q Consensus 92 -----~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~ 140 (738)
++.+.++.+.++.+++.+...+...+++.|.+|+++||+..++.++..+
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 302 DGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4567788889999999999999999999999999999999999887654
No 206
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.79 E-value=3.4e-08 Score=108.28 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=102.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhh
Q 004673 562 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 641 (738)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 641 (738)
..+......+.++.+++++..|.++||+|||.+++++++..+++..+.+.+.... .+...=+...++...
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~----------afv~aR~l~Gi~kgn 137 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFA----------AFVLARFLGGIFKGN 137 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHhhhhccCc
Confidence 3444555556799999999999999999999999999999999888877754322 111112233344444
Q ss_pred cCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHH---hhcchhHHHHHHHHHHHH---HHHHHHhccCC
Q 004673 642 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS---SIGLAGAFGVYAVVCFIS---WVFVFLRVPET 715 (738)
Q Consensus 642 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~---~~g~~~~~~~~~~~~~~~---~~~~~~~~~e~ 715 (738)
.+.+. +++.|++++|.|+.+++..+.+..+|.++||++++++.. ..|....++....++.++ ..++.+++|||
T Consensus 138 l~v~r-AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 138 LSVIR-AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred hHHHH-HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 44444 888999999999999999999999999999999999987 445433333222222222 33445578998
Q ss_pred CC
Q 004673 716 KG 717 (738)
Q Consensus 716 ~~ 717 (738)
-.
T Consensus 217 L~ 218 (451)
T KOG2615|consen 217 LP 218 (451)
T ss_pred cc
Confidence 44
No 207
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.78 E-value=2.1e-07 Score=103.46 Aligned_cols=178 Identities=20% Similarity=0.241 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHH
Q 004673 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (738)
Q Consensus 6 lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s 85 (738)
+..+++.-..+.++.+ ++++....+-..++|++..+..++.....+..++++++.|+|.||+|.|+++.++++++.+.+
T Consensus 254 i~~FLiA~~~~~DGv~-til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 254 LVLFLIARFFYIDGVN-TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred hHHHHHHHHHHHhhHH-HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 3444444444555544 444444455666999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHH
Q 004673 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (738)
Q Consensus 86 ~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~ 165 (738)
+...+...-..+.++-++.|+..|..+....+|.++.+|+++-++..+++..+.-.+..+|+..........+ +-|.-+
T Consensus 333 ~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg-~~r~g~ 411 (438)
T COG2270 333 LYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG-SSRAGV 411 (438)
T ss_pred HHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc-chhhHH
Confidence 9888877777777888999999999999999999999999999999999999999999999877766654444 467766
Q ss_pred HHHHHHHHHHHHHHhhcccCC
Q 004673 166 GVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 166 ~I~ail~~~~~~~i~~flpES 186 (738)
....++..+.+ +.+..+|+.
T Consensus 412 ~~i~vll~iGl-~~L~~v~~~ 431 (438)
T COG2270 412 LSIIVLLLIGL-LLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhhH-hhEEeecCC
Confidence 66655555544 335556554
No 208
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.76 E-value=6e-07 Score=99.34 Aligned_cols=142 Identities=11% Similarity=0.027 Sum_probs=110.5
Q ss_pred HHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 004673 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVG 109 (738)
Q Consensus 30 p~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G 109 (738)
+++++.+|.++.+.|++.+...+|..++++..+++.||+++|+++..+.. .++..++.++.++++.+++.-++.|++.+
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 34667789999999999999999999999999999999999998888754 44555556667788877788889999999
Q ss_pred hhhhhHHHHHhhcCCcch-hhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 004673 110 LAVTLVPLYISETAPSEI-RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPAL 173 (738)
Q Consensus 110 ~~~~~~~a~IaE~~P~k~-Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~ 173 (738)
...+...+.+.+..|++. +|++.++.+....+|..++..+..... .....++..|...+.+..
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV-KLGVPVVAVIVGFGLLVA 372 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH
Confidence 888888888888766654 799999999999999998865544332 223355555555555433
No 209
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.75 E-value=2.2e-07 Score=106.35 Aligned_cols=188 Identities=15% Similarity=0.083 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh----ccchhH
Q 004673 518 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMD----VAGRRK 593 (738)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d----~~grr~ 593 (738)
++....+.+..|++ +.....+.+.+++.. |++.. ...++.....+.+++..++.|+++| |+|||+
T Consensus 6 li~~~~~~~Giq~~-~~l~~~~l~~yl~~l---------g~~~~-~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr 74 (477)
T TIGR01301 6 LLRVASVAAGVQFG-WALQLSLLTPYVQEL---------GIPHA-WASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR 74 (477)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHc---------CCCHH-HHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH
Confidence 33334444444554 445566666677664 45454 4444456677899999999999999 599999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhh-----hhhh-hh--hHHHHHHHHHHHHhhhhcCcchhhhhcccCcccch--hhh
Q 004673 594 LLLTT-IPVLIVSLIILVISETLQLI-----SPVL-KA--GISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVR--GIC 662 (738)
Q Consensus 594 ~l~~~-~~~~~v~~~~~~~~~~~~~~-----s~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~ 662 (738)
.++.. ....+++++++......... .... .. +..+..+.+..+.......|.. ++++|++|++.| +.+
T Consensus 75 p~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~r-ALiaDl~p~~~~~~~~a 153 (477)
T TIGR01301 75 PFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCR-AFLADLTGGDARRTRIA 153 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccccCchhHHHHHH
Confidence 88774 55555555555543321100 0000 01 1122222233333444444444 788999999876 578
Q ss_pred hHHHHHhhhHHHHHHhhhHHHH--HHhh-------------cchhHHHHHHHHHHHHHHHHHHhccCCCC
Q 004673 663 IAICAMAYWICDIIVTYTLPVM--LSSI-------------GLAGAFGVYAVVCFISWVFVFLRVPETKG 717 (738)
Q Consensus 663 ~gi~~~~~~i~~~i~~~~~~~~--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 717 (738)
.++.+...++|+++++.++++. .+.. +.+..|.+-+++.+++.++..+.+||..-
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 9999999999999999988865 2221 45678888888888888888888898653
No 210
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.74 E-value=7.8e-08 Score=112.26 Aligned_cols=139 Identities=18% Similarity=0.248 Sum_probs=101.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhh
Q 004673 562 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 641 (738)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 641 (738)
....+++....+...++.++.|+|+|.+|||+.++++..+.+++.++.....+.. ..++...+++++. +
T Consensus 78 ~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~---------~~iag~~l~Gvga--G 146 (599)
T PF06609_consen 78 DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN---------TFIAGMVLYGVGA--G 146 (599)
T ss_pred ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH---------HHHHHHHHHHHhh--H
Confidence 3444455667788888999999999999999999999999999999888765544 3344455554443 3
Q ss_pred cCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 004673 642 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLR 711 (738)
Q Consensus 642 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 711 (738)
........++|+.|.|.|..+.++.....-+...+++.+...+....+||+.|+++++...++++.++++
T Consensus 147 ~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 147 VQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 3334556679999999999888776655545555666666665556689999998888777766554443
No 211
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.72 E-value=1.9e-07 Score=100.74 Aligned_cols=152 Identities=16% Similarity=0.160 Sum_probs=101.9
Q ss_pred hhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 004673 531 SGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILV 610 (738)
Q Consensus 531 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~ 610 (738)
.++..+...+|.+.++ +|++....+... ....++..++.++.|+++||+|||+.++.+..+.+++.+..
T Consensus 14 ~~~~~~~~~lp~l~~~---------~~~s~~~~g~~~-s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~- 82 (355)
T TIGR00896 14 PALTSVGPLLPQIRSA---------LGMSFSVAGLLT-ALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR- 82 (355)
T ss_pred CccccCcccHHHHHHH---------hCCCHHHHHHHH-HHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-
Confidence 3445556677777666 455655555554 55678999999999999999999999998877766655443
Q ss_pred HHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhc-
Q 004673 611 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG- 689 (738)
Q Consensus 611 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g- 689 (738)
... + .+..++..++..++.+... +....++.|.+| +.|+.+.++.++...+|..+++.+.+.+.+..+
T Consensus 83 ~~~--~-------~~~l~~~~~~~g~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~ 151 (355)
T TIGR00896 83 SAP--G-------TALLFAGTALIGVGIAIIN-VLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGG 151 (355)
T ss_pred Hhc--c-------HHHHHHHHHHHHHHHHHHh-ccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 211 1 1222222223333333322 233356678886 579999999999999999999999998877653
Q ss_pred -chhHHHHHHHHHHHH
Q 004673 690 -LAGAFGVYAVVCFIS 704 (738)
Q Consensus 690 -~~~~~~~~~~~~~~~ 704 (738)
|+..|.+.++++++.
T Consensus 152 ~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 152 HWQQALAWWALPALLA 167 (355)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 777777666554443
No 212
>PRK09848 glucuronide transporter; Provisional
Probab=98.72 E-value=7.5e-07 Score=99.82 Aligned_cols=130 Identities=18% Similarity=0.248 Sum_probs=101.8
Q ss_pred HHHHHHHHHH-HHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHH
Q 004673 23 ATIAGAIVYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCI 99 (738)
Q Consensus 23 ~~~~~~lp~L-~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~--~~~~liI 99 (738)
.......|++ ...+|.+....++......++..++.++.++++||+|+|+++.++.++.+++.++..+.+ +++.+++
T Consensus 245 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 324 (448)
T PRK09848 245 FAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALV 324 (448)
T ss_pred HHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHH
Confidence 3333445544 445777666555555555677888999999999999999999999999888888777643 6777777
Q ss_pred HHHHHHHHHhhhhhhHHHHHhhcCCcc-------hhhhhchHhHHHhhhhhHhhHHHHHH
Q 004673 100 ARLLDGFGVGLAVTLVPLYISETAPSE-------IRGRLNTLPQFTGSGGMFLAYCMVFG 152 (738)
Q Consensus 100 ~r~l~G~g~G~~~~~~~a~IaE~~P~k-------~Rg~~~~~~~~~~~~G~~I~~~~~~~ 152 (738)
..++.|+|.+...+...++++|..|.+ ++|...++.++...+|..++..+...
T Consensus 325 ~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 325 ALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999988754 35889999999999999988655443
No 213
>PTZ00207 hypothetical protein; Provisional
Probab=98.71 E-value=3.4e-07 Score=107.12 Aligned_cols=165 Identities=9% Similarity=0.052 Sum_probs=105.0
Q ss_pred hhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 004673 533 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 612 (738)
Q Consensus 533 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~ 612 (738)
.+.+..+.+.+.++ +|++..+.+.+.++. ...+ .+.+++|++.||+|+|++++++..+..++.+++.+.
T Consensus 43 ~y~fsv~s~~L~~~---------lgls~~~l~~i~svg-~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala 111 (591)
T PTZ00207 43 MYAFNLISGAMQAR---------YNLTQRDLSTITTVG-IAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHHHHHHHH---------hCcCHHHHHHHHHHH-HHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777776555 456666665555442 2222 355678999999999999999999999998888775
Q ss_pred HHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchh
Q 004673 613 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 692 (738)
Q Consensus 613 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~ 692 (738)
.... . ....+...++.++.+.+.+ ...+.....+.+.|| +.||.+.|+......+|.++.+.+...++. .+|..
T Consensus 112 ~~~~-i--~~s~~~l~l~r~l~G~G~~-~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~ 185 (591)
T PTZ00207 112 FQEV-I--EGSVVRLSVYNGLMTLGCM-LFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSA 185 (591)
T ss_pred hccc-c--cCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHH
Confidence 2211 0 0111222222222222221 122233456678897 679999999999999999876665555544 35677
Q ss_pred HHHHHHHHHHHHHHHHHHhccC
Q 004673 693 AFGVYAVVCFISWVFVFLRVPE 714 (738)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~e 714 (738)
.|++.+++.++.+++.+.+++.
T Consensus 186 ~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 186 YFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHHHHHHhheeC
Confidence 7777777777777776666543
No 214
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.69 E-value=6.7e-07 Score=100.34 Aligned_cols=172 Identities=13% Similarity=0.203 Sum_probs=135.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhh
Q 004673 14 GNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPN 93 (738)
Q Consensus 14 ~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~ 93 (738)
..+-+.+|++ +......+-++-+.++...|.+.++..+.-++.-.+..++.+|+|.|+.++++.+++++=.+++++++|
T Consensus 233 ~~~Y~vfdqq-f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~ 311 (412)
T PF01306_consen 233 AAIYDVFDQQ-FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATN 311 (412)
T ss_dssp HHHHHHHHHH-HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--S
T ss_pred HHHHHHHHHH-HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcc
Confidence 3455666666 333322222333445678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchH-hHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 004673 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPA 172 (738)
Q Consensus 94 ~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~-~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~ 172 (738)
.+.+.+.+.+.|+-.+........|+++.+|++-.+++..+ .+...++|.++. ....+...++.|.+.+|++++.+.
T Consensus 312 ~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~--s~~~G~lyd~~G~~~tylimg~iv 389 (412)
T PF01306_consen 312 PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL--SPLAGYLYDRIGFQHTYLIMGLIV 389 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH--hhhHHhhHhhcCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999877776666 366777777776 444566688889999999999998
Q ss_pred HHHHHHHhhcccCCch
Q 004673 173 LLYFAFAVFFLPESPR 188 (738)
Q Consensus 173 ~~~~~~i~~flpESp~ 188 (738)
++..++.++.+++.++
T Consensus 390 ~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 390 LPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHS--SSS
T ss_pred HHHHHHheeeecCCCc
Confidence 8888888888877643
No 215
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=1.9e-07 Score=106.78 Aligned_cols=139 Identities=15% Similarity=0.141 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhc
Q 004673 563 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAY 642 (738)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 642 (738)
...+...+..++.++|.++.|.++|++|||++++.+..+.+++.++.++..... .++..=++.+.+..+.
T Consensus 119 ~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~----------~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 119 LVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYW----------MFLIFRFLSGFFGSGP 188 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHH----------HHHHHHHHHHhhccch
Confidence 334444556789999999999999999999999999999999987777765544 3333333444444555
Q ss_pred CcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 643 GPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 643 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
..+.+++++|+++++.|+.+..+ ....+.++.+++...+++.. +|++.+++....+++..++ +++.||.
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 66777899999999999999999 88899999999999999887 8998888888777777665 5555564
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.5e-06 Score=99.46 Aligned_cols=171 Identities=19% Similarity=0.128 Sum_probs=125.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q 004673 12 TIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (738)
Q Consensus 12 ~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa 91 (738)
.+....+.-+...+......+-++-|++..+.-+......+...+.++++..+.||+|||+.++++..+..+..+++...
T Consensus 276 ~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~ 355 (485)
T KOG0569|consen 276 VVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIA 355 (485)
T ss_pred HHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 33333333344444555567888999999999999999999999999999999999999999999999999888887753
Q ss_pred h---hHH------HHHHHH--HHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccch
Q 004673 92 P---NVY------VLCIAR--LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (738)
Q Consensus 92 ~---~~~------~liI~r--~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~ 160 (738)
- +.. ..+++. +...++.|.. |..+-+.+|.+|++.|..+.++..+...+..++-....... .+..|
T Consensus 356 ~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l--~~~~g 432 (485)
T KOG0569|consen 356 LFLSNSFGSWLSYLCIAAIFLFIISFAIGPG-PIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPL--QNVIG 432 (485)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhc
Confidence 1 111 123333 3344444443 77788999999999999999998877777776642222222 22223
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 161 WRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 161 Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
= +.|.+..+++++.+++.++++|||
T Consensus 433 ~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 433 P-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred c-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 2 778888888888888999999999
No 217
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.67 E-value=1.7e-06 Score=95.56 Aligned_cols=144 Identities=18% Similarity=0.154 Sum_probs=103.6
Q ss_pred HHHHHHhhCCChhHHHHHHHHH-HHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHH--
Q 004673 29 IVYIKKDLNLGTTVEGLVVAMS-LIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM---LWS-PNVYVLCIAR-- 101 (738)
Q Consensus 29 lp~L~~dfGlS~s~iGLi~Sl~-~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~---afa-~~~~~liI~r-- 101 (738)
.+.+.+++|+++.+.+++.+.. .++..++.+++|++.||+|+|+.+.++.++.++..+.. ++. ++.+.++++-
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 3557778999999999988665 45688999999999999999999888777766665443 333 4555555443
Q ss_pred --HHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 004673 102 --LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (738)
Q Consensus 102 --~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~ 178 (738)
+..|++.+...+....++.+.+|.+.++. .+...++|..++.. ..+...+..||+.+|.+.++++++.+++
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~--~~G~l~~~~G~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQYAL----LSALASVGRVYVGP--TSGYLVEAYGWPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH----HHHHHHHHHHHHHH--HHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 45667777778888888888888776543 44444556654432 3445567779999999998888776544
No 218
>PRK10133 L-fucose transporter; Provisional
Probab=98.66 E-value=1.2e-06 Score=98.63 Aligned_cols=136 Identities=10% Similarity=0.003 Sum_probs=94.0
Q ss_pred hhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 004673 533 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 612 (738)
Q Consensus 533 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~ 612 (738)
.+....+.|.+-++ +|+++.+.+.+. ....++..++.++.|+++||+|||++++.+..+.+++.+++...
T Consensus 42 ~~~~~~~~p~i~~~---------~~~s~~~~gl~~-~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~ 111 (438)
T PRK10133 42 NNLNDILLPQFQQA---------FTLTNFQAGLIQ-SAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPA 111 (438)
T ss_pred HHHHHHHHHHHHHH---------hCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677776444 566665555555 55679999999999999999999999999999999888765322
Q ss_pred HHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHH
Q 004673 613 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML 685 (738)
Q Consensus 613 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~ 685 (738)
.... .......+.++.+++.+.. .+..+.++.|..|.+.|....++.+....+|..+++.+++.+.
T Consensus 112 ~~a~------~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 112 AEIM------NYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HhcC------CHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1223333334444444433 3444566678877777766789999999999999998877654
No 219
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.65 E-value=1.3e-06 Score=99.35 Aligned_cols=157 Identities=15% Similarity=0.176 Sum_probs=114.0
Q ss_pred hhhhhHHHHHHhhhhhhhhhhcCCCchh-hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHH
Q 004673 535 GVLYYTPQILEQAGVEVLLSNLGISSES-ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 613 (738)
Q Consensus 535 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~ 613 (738)
...+-.|.+.++ +|++.++ .+.+.++ ...+.+++.+++|+++||+|-|+++..+.+.-.+..+++++..
T Consensus 44 n~s~a~p~L~~e---------lglT~~qv~G~I~s~-F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~ 113 (511)
T TIGR00806 44 GESFITPYLLTV---------LNFTEETVTNEIIPV-LPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT 113 (511)
T ss_pred hHHHHHHHHHHH---------cCCCHHHhcchHHHH-HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555544 6777777 5555544 5799999999999999999999999999888888888887754
Q ss_pred HhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhH
Q 004673 614 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 693 (738)
Q Consensus 614 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~ 693 (738)
... ...++-++++.+-+..+ ..+.++...+|++.|+++.|+++....+|.++++.+.+. +...||+..
T Consensus 114 Sl~---------~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y 181 (511)
T TIGR00806 114 SVW---------HMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISY 181 (511)
T ss_pred HHH---------HHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhH
Confidence 332 34444555555555555 555778899999999999999999999999999999999 567898866
Q ss_pred HHHH--HHHHHHHHHHHHHhcc
Q 004673 694 FGVY--AVVCFISWVFVFLRVP 713 (738)
Q Consensus 694 ~~~~--~~~~~~~~~~~~~~~~ 713 (738)
+.+. ...+.+.+++..+++|
T Consensus 182 ~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 182 STLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 5432 2333333344444566
No 220
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.64 E-value=2.7e-08 Score=111.35 Aligned_cols=158 Identities=20% Similarity=0.164 Sum_probs=124.1
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 634 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 634 (738)
.+++++.....+-+. ..+...++++++|++.||+.|++++.+++++-.++.++..+...+. ..+++=. +
T Consensus 62 ~fni~~s~~Gll~~v-f~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fw---------q~~l~R~-~ 130 (493)
T KOG1330|consen 62 YFNISDSELGLLQTV-FIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFW---------QVLLCRG-F 130 (493)
T ss_pred hcCCCchhccchhHH-HHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHH---------HHHHHHH-H
Confidence 477887666655544 5688888999999999999999999999988888887777663322 2322222 2
Q ss_pred HHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHhcc
Q 004673 635 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG-LAGAFGVYAVVCFISWVFVFLRVP 713 (738)
Q Consensus 635 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 713 (738)
...--+.+.++...++++.||.+.|+..+++.+++..+|..+|-.++.++.+..+ |+++|.+.+++.++..++++++++
T Consensus 131 vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 131 VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 2333346778888999999999999999999999999999999999999888887 999999999999999999888887
Q ss_pred CCCCCChhhh
Q 004673 714 ETKGMPLEVI 723 (738)
Q Consensus 714 e~~~~~l~~~ 723 (738)
|......|+.
T Consensus 211 eP~rga~~~~ 220 (493)
T KOG1330|consen 211 EPERGARDEV 220 (493)
T ss_pred Cccccccccc
Confidence 7654333333
No 221
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.63 E-value=2.5e-06 Score=92.02 Aligned_cols=155 Identities=10% Similarity=0.015 Sum_probs=113.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHH---hhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKK---DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~---dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
..++.|+.......++...+.+.+ .+|+++.+.++..+.+..+..++.++.+++.||+|+|+++.++.++..++.++
T Consensus 145 ~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l 224 (310)
T TIGR01272 145 GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIG 224 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 445555544445555555554443 36999999999999999999999999999999999999999998888888776
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHH
Q 004673 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (738)
Q Consensus 88 ~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I 167 (738)
....++...+ .+-++.|++.+..+|...+...+.+|++ .+.+.++. ....+|.++.+. ..+...+..|.+..|++
T Consensus 225 ~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~--l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 225 AALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPL--LQGSLADCLGIQLAFAL 299 (310)
T ss_pred HHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHH--HHHHHHHhccchHHHHH
Confidence 6665544332 3555889999999999999999988764 45666665 456677777743 34444566678888764
Q ss_pred HHH
Q 004673 168 LSI 170 (738)
Q Consensus 168 ~ai 170 (738)
..+
T Consensus 300 ~~~ 302 (310)
T TIGR01272 300 PVP 302 (310)
T ss_pred HHH
Confidence 443
No 222
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.62 E-value=2.5e-07 Score=109.42 Aligned_cols=159 Identities=11% Similarity=-0.016 Sum_probs=108.7
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhh---h----------h--
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL---I----------S-- 619 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~---~----------s-- 619 (738)
++++++.+.+.+. ....++.+++.++.+++.||+|||+.+.++.++++++.+++++...... . +
T Consensus 62 ~F~lss~~~G~i~-s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~ 140 (633)
T TIGR00805 62 RFKLSTSSSGLIN-GSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSA 140 (633)
T ss_pred hhCCCCCcceeee-ehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccc
Confidence 4777776665555 4567899999999999999999999999999999999888876531110 0 0
Q ss_pred -------h-----------------h--hhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHH
Q 004673 620 -------P-----------------V--LKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWIC 673 (738)
Q Consensus 620 -------~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~ 673 (738)
. . ......++..-+..........++...++.|.+|++.|+...|+.+....+|
T Consensus 141 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG 220 (633)
T TIGR00805 141 NSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFG 220 (633)
T ss_pred ccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhh
Confidence 0 0 0011111111122222223344566689999999999999999999999999
Q ss_pred HHHHhhhHHHHHHhh---------------------c-chhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 674 DIIVTYTLPVMLSSI---------------------G-LAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 674 ~~i~~~~~~~~~~~~---------------------g-~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
..+++.+++.+.+.. | |+..|++.+++.++.++. ++++|++
T Consensus 221 ~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~ 283 (633)
T TIGR00805 221 PAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKA 283 (633)
T ss_pred hHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCccc
Confidence 999999999887642 1 555566666666665544 4455654
No 223
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.57 E-value=9.6e-07 Score=100.89 Aligned_cols=151 Identities=17% Similarity=0.146 Sum_probs=122.2
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHH
Q 004673 554 SNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVII 633 (738)
Q Consensus 554 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 633 (738)
.++..++++.+.+++.+ ..+.+++.+.++++.||+|-|+++..+..+.+++.++.++..... .+..+++=++
T Consensus 66 ~~~~ws~~~k~~i~ss~-~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-------~~~~~~~R~l 137 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSF-FWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-------FYLLLVLRFL 137 (466)
T ss_pred ceecCCHHHHHHHHHHH-HHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-------chhhHHHHHH
Confidence 36788888888888775 599999999999999999999999999999999999888876554 1222333333
Q ss_pred HHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHhc
Q 004673 634 YFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS-IGLAGAFGVYAVVCFISWVFVFLRV 712 (738)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 712 (738)
-+.+.+.. .|....+.+.-.|+++|++..++......+|.+++.++.|.+.+. .||...|.++++++++-.++.+++.
T Consensus 138 qGl~~g~~-~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 138 QGLGQGVL-FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred hHHHHhHH-HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 33333333 444457779999999999999999999999999999999999999 9999999999999888777766655
Q ss_pred c
Q 004673 713 P 713 (738)
Q Consensus 713 ~ 713 (738)
.
T Consensus 217 ~ 217 (466)
T KOG2532|consen 217 S 217 (466)
T ss_pred c
Confidence 4
No 224
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.57 E-value=1.4e-06 Score=100.09 Aligned_cols=139 Identities=21% Similarity=0.236 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCc
Q 004673 565 FLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGP 644 (738)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (738)
.++.....++.+++.+++|+++|++|||+.++++.+...++.++.+...... ...+.=++.+++.+.....
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~---------~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWY---------QLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHH---------HHHHHHHHhccchhhhhhc
Confidence 4555667899999999999999999999999999999999999998876433 3444555555555555544
Q ss_pred chhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhh--cchhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 645 IPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI--GLAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 645 ~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
.+ .+.+|+.|++.||...++......+|..++ ++.+...... +|+..+++..+.+++..+. .+++||+
T Consensus 163 ~p-iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 163 AP-VYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred ch-hhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 55 899999999999999999999888777776 6666666554 8998888877777777776 7778875
No 225
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.54 E-value=4.3e-06 Score=94.89 Aligned_cols=133 Identities=16% Similarity=0.116 Sum_probs=99.5
Q ss_pred HhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-----hhhH
Q 004673 20 WDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-----SPNV 94 (738)
Q Consensus 20 ~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af-----a~~~ 94 (738)
......+...+++.+...-+....+++.++..++..++.+++++++||+|+|+++.++.++.+++.+...+ ..+.
T Consensus 245 ~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (473)
T PRK10429 245 IASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNA 324 (473)
T ss_pred HHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhH
Confidence 33344444445555554445667777777777889999999999999999999999888877766655432 3466
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHhhcCC-------cchhhhhchHhHHHhhhhhHhhHHHHHH
Q 004673 95 YVLCIARLLDGFGVGLAVTLVPLYISETAP-------SEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (738)
Q Consensus 95 ~~liI~r~l~G~g~G~~~~~~~a~IaE~~P-------~k~Rg~~~~~~~~~~~~G~~I~~~~~~~ 152 (738)
+.+++.-++.|++.+...+...++++|..+ .++.|...++..+..-+|..+++.+...
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777778889999999999999999999976 2334668888888888888887655443
No 226
>PRK09669 putative symporter YagG; Provisional
Probab=98.52 E-value=6e-06 Score=92.56 Aligned_cols=130 Identities=16% Similarity=0.167 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh--hhhHHHHHHH
Q 004673 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW--SPNVYVLCIA 100 (738)
Q Consensus 23 ~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af--a~~~~~liI~ 100 (738)
...+...+++.++.--.++..+.+.....+...++.+++++++||+|+|+.+.++.++.++..++..+ .++.+.+++.
T Consensus 246 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (444)
T PRK09669 246 VTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFAL 325 (444)
T ss_pred HHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHH
Confidence 33334444444433223444555666677888888899999999999999999888776654443332 3577778888
Q ss_pred HHHHHHHHhhhhhhHHHHHhhcCCc-------chhhhhchHhHHHhhhhhHhhHHHHHH
Q 004673 101 RLLDGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (738)
Q Consensus 101 r~l~G~g~G~~~~~~~a~IaE~~P~-------k~Rg~~~~~~~~~~~~G~~I~~~~~~~ 152 (738)
.++.|++.+...+...++++|..+. +..|...++..+...+|..+|+.+...
T Consensus 326 ~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 326 NILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998862 223566777777778888888655544
No 227
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.52 E-value=9.3e-06 Score=91.11 Aligned_cols=175 Identities=19% Similarity=0.226 Sum_probs=133.5
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhC-CChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q 004673 12 TIGNFLQGWDNATIAGAIVYIKKDLN-LGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (738)
Q Consensus 12 ~L~~~~~g~~~~~~~~~lp~L~~dfG-lS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af 90 (738)
.+..++.+...+.+....+...++.| .+....+.+.++..++-+..-.+.+++..|+|.|++++++.+.+++=..+.++
T Consensus 213 ll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~ 292 (400)
T PF03825_consen 213 LLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAY 292 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556566666666676777777 77888888888888899999999999999999999999999999999988888
Q ss_pred h-hhHHHHHHH----HHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHH-HhhhhhHhhHHHHHHHHHhc----cch
Q 004673 91 S-PNVYVLCIA----RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF-TGSGGMFLAYCMVFGMSLLA----SPS 160 (738)
Q Consensus 91 a-~~~~~liI~----r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~-~~~~G~~I~~~~~~~l~l~~----~~~ 160 (738)
. ++.+.+.+. ..+.|+..+..+.....|+.+.+|++.|+++.+++.. ...+|.++|..++....... ...
T Consensus 293 ~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~ 372 (400)
T PF03825_consen 293 FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFD 372 (400)
T ss_pred hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhh
Confidence 7 555444333 4579999999999999999999999999999999876 46788888866654443211 124
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 161 WRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 161 Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
|...+.+.+++.++..++.+++.+|+
T Consensus 373 ~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 373 WSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 66677777777666655555555554
No 228
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.50 E-value=1.2e-06 Score=101.11 Aligned_cols=174 Identities=14% Similarity=0.120 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhC--ChHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG--RRPMLILSSVLYFVSG 85 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfG--RR~~LliglvI~aI~s 85 (738)
.+...+++.+...........+|.+.++.+.+..+...+.++..+...++.++.|+++|+.. ++.+..+++++.+++.
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 44556667777777777778889999999999999999999999999999999999999998 5667888999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccc-hhHHH
Q 004673 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLM 164 (738)
Q Consensus 86 ~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~-~Wr~~ 164 (738)
+.+.++++++.+++.-++.|+..|.........+.|.++.++-..+.|+...+.+++.++|+.+ .....+.. +|...
T Consensus 380 ~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPi--ag~~~d~tg~Y~~~ 457 (509)
T KOG2504|consen 380 LFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPI--AGLLYDITGNYDHA 457 (509)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCccc--ceeeeeccCCeeee
Confidence 9999999999999999999999999988888899999999999999999999999999999443 33444444 49999
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 004673 165 LGVLSIPALLYFAFAVFFLP 184 (738)
Q Consensus 165 ~~I~ail~~~~~~~i~~flp 184 (738)
|+..++..++...+ ++..+
T Consensus 458 f~~~g~~~~~s~~~-~~~~~ 476 (509)
T KOG2504|consen 458 FYFCGLCFLLSAVL-LLILR 476 (509)
T ss_pred hhhcChHHHHHHHH-HHHhH
Confidence 99998887776543 44444
No 229
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.49 E-value=5.2e-05 Score=86.31 Aligned_cols=105 Identities=22% Similarity=0.247 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcc
Q 004673 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (738)
Q Consensus 47 ~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k 126 (738)
.++....+.+.+++.+.+.|+.|.|..+.++...+....+.+.+. |-+.++++-.+.|+|.+..+..--.|+.|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 777888889999999999999999999999999999888777764 4666778999999999999999999999999999
Q ss_pred hhhhhchHhHHHhhhhhHhhHHHHHH
Q 004673 127 IRGRLNTLPQFTGSGGMFLAYCMVFG 152 (738)
Q Consensus 127 ~Rg~~~~~~~~~~~~G~~I~~~~~~~ 152 (738)
++.+..++.......+.++|.+..+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 99999998888888888777544433
No 230
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.49 E-value=1.9e-06 Score=97.75 Aligned_cols=182 Identities=20% Similarity=0.228 Sum_probs=129.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhcc-chhHH
Q 004673 516 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-GRRKL 594 (738)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-grr~~ 594 (738)
|.++..+.+.+.-.|+.|..-....-++..+.+. .+|++++.+..+.++......+ ..+++||++||+ |+|+.
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~-----gLg~~~~~A~~l~~~y~slVY~-t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGD-----GLGFDETHATGLFSAYGSLVYL-TPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccc-----cCCcChHhhHHHHHHHHHHHHH-HHHHHHHHHHHhcchhHH
Confidence 6777777777777777555433333344444332 2778888888887776655554 677999999985 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccc--hhhhhHHHHHhhhH
Q 004673 595 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV--RGICIAICAMAYWI 672 (738)
Q Consensus 595 l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~i 672 (738)
++.+.++++++.+++....... .....+.+.+..++.+ ..-+....++.|++|++. |-.++++..+..++
T Consensus 95 I~lGail~~iGh~~L~~~~~~~-------~~gl~i~L~~I~iG~G-l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi 166 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSG-------PGGLYIGLALIIVGTG-LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI 166 (498)
T ss_pred HHHHHHHHHHHHHHHhcccccc-------ccHHHHHHHHHHhccc-cccccHHHHHHHhcCCCCcccCCCccEEEEEeeh
Confidence 9999999999999988763010 1112222222223333 333445577889987663 56688888999999
Q ss_pred HHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 004673 673 CDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLR 711 (738)
Q Consensus 673 ~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 711 (738)
|++++|.+++++.+..||...|.+.++-..++.+..++.
T Consensus 167 Gsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 167 GSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999888888877766654
No 231
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.48 E-value=7.3e-07 Score=101.55 Aligned_cols=158 Identities=10% Similarity=0.125 Sum_probs=119.5
Q ss_pred hhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 004673 533 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 612 (738)
Q Consensus 533 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~ 612 (738)
...+.+++-.-+++.+.. + ..-...++..-.+.++..++.++|.+|+|+-+++.+++++..+=++.+...
T Consensus 387 ~~lv~tFLfWHled~~~~---------~-~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L 456 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGI---------K-TLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL 456 (618)
T ss_pred HHHHHHHHHHHHhhcCCc---------c-eeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh
Confidence 344455555556664321 1 222244566778888889999999999999999999888877766665443
Q ss_pred HHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHH-HhhhHHHHHHhhhHHHHHHhhcch
Q 004673 613 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICA-MAYWICDIIVTYTLPVMLSSIGLA 691 (738)
Q Consensus 613 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~-~~~~i~~~i~~~~~~~~~~~~g~~ 691 (738)
. .+|..+..-++-.+.++..|.++. .|+..+.|++.|.++.|+.. ....+|--+|.+++|.+.+.+|-+
T Consensus 457 ~---------n~W~vLPieilqgit~aliWaa~~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ 526 (618)
T KOG3762|consen 457 Q---------NPWMVLPIEILQGITHALIWAAII-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGAR 526 (618)
T ss_pred c---------CchheeeHHHHHHHHHHHHHHHHH-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhH
Confidence 3 345666677777777777777777 78889999999999999884 457889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 004673 692 GAFGVYAVVCFISWVFVFL 710 (738)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~ 710 (738)
..|.++++.|++.+++...
T Consensus 527 ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 527 TTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999998888887766544
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.47 E-value=4.6e-07 Score=100.06 Aligned_cols=147 Identities=16% Similarity=0.134 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhc
Q 004673 563 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAY 642 (738)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 642 (738)
...++.+...+.+++..++.|.+.||+|+|..++++++++.++.+++++...+. ..+..=.+=+.+.++..
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~---------~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYP---------MLFVARSLQGVGSAFAD 177 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhH---------HHHHHHHHhhhhHHHHH
Confidence 334444667899999999999999999999999999999999999998865544 22222222223333322
Q ss_pred CcchhhhhcccCcccc-hhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004673 643 GPIPNILCAEIFPTKV-RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMP 719 (738)
Q Consensus 643 ~~~~~~~~~e~~p~~~-r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 719 (738)
.....+.++.||.++ |+.++|+.-.+..+|.+++|..+|++.+..|...+|.+.+.++++..++.++.++.++..+
T Consensus 178 -tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 178 -TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred -hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 233477799999987 6999999999999999999999999999999999999999999999999888887766554
No 233
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.46 E-value=5e-06 Score=92.80 Aligned_cols=142 Identities=16% Similarity=0.168 Sum_probs=117.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~d-fGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~a 89 (738)
+.+..++........+...+++.++ ++.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 308 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLF 308 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHH
Confidence 4445555556666666666776665 4544 6788888899999999999999999999999999999999999999998
Q ss_pred hhh--hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCc-------chhhhhchHhHHHhhhhhHhhHHHHHHH
Q 004673 90 WSP--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 90 fa~--~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~-------k~Rg~~~~~~~~~~~~G~~I~~~~~~~l 153 (738)
+.+ |.+.+++.-++.|++.+..++...++++|..+. ++.|...++..+..-+|..++..+....
T Consensus 309 ~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 309 FLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 886 999999999999999999999999999999973 3348888888888888888886655443
No 234
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.41 E-value=1.7e-06 Score=94.80 Aligned_cols=175 Identities=18% Similarity=0.161 Sum_probs=118.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCh-------------------hHHHHHHHHHHHHHHHHHHhHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGT-------------------TVEGLVVAMSLIGATAITTCSG 62 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~-------------------s~iGLi~Sl~~~g~a~~~~~~G 62 (738)
+|.-+.++.+++++.+.+++.-.+..-+-......++.. +.--++ +..+.-.-|.++.+
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdll--itslaefPGlLIt~ 402 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLL--ITSLAEFPGLLITG 402 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHH--HHHHhhCCchhHHH
Confidence 355567778888888888776655443322222222211 111111 22334556888999
Q ss_pred HHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hHH--HHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHH
Q 004673 63 PISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVY--VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFT 138 (738)
Q Consensus 63 ~LsDRfGRR~~LliglvI~aI~s~~~afa~--~~~--~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~ 138 (738)
++.||+|||+.+..+.+++++..++...+. |.+ +++.+|++. .+.+.+.++|..|.+|.+-|+...|.....
T Consensus 403 ~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPTavRatgvGtcSsm 478 (528)
T KOG0253|consen 403 VIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTAVRATGVGTCSSM 478 (528)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccchhhhhcchhhhhhH
Confidence 999999999999999999999998887754 332 333446554 444566788999999999999999999999
Q ss_pred hhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 139 GSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 139 ~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
.-+|.++.+++..-. ..+-..+..+.+.++++..+...++--|+
T Consensus 479 aRIggI~~p~iA~~~----e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 479 ARIGGIFSPVIAMRA----ELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred HhhhhhhhhHHHHHh----ccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999999997666222 22334566677777777776655555566
No 235
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.25 E-value=0.021 Score=65.81 Aligned_cols=142 Identities=8% Similarity=0.085 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhCC-----ChhHHHHHHHHHHHHHHHH-HHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNL-----GTTVEGLVVAMSLIGATAI-TTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 9 lil~L~~~~~g~~~~~~~~~lp~L~~dfGl-----S~s~iGLi~Sl~~~g~a~~-~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
+.+.+..|+......+ +-.+++.+.+ ....+.++.+...+..++. .++.+++++|++|++++-+....+.
T Consensus 10 ~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~ 85 (472)
T TIGR00769 10 LPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFL 85 (472)
T ss_pred HHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHH
Confidence 3344444444444333 3567777655 3367888888877776666 8899999999999999988888777
Q ss_pred HHHHHHHhh----h---------------------------hHHHHHHHHHHHHHHHhhhhh-hHHHHHhhcCCcchhhh
Q 004673 83 VSGLVMLWS----P---------------------------NVYVLCIARLLDGFGVGLAVT-LVPLYISETAPSEIRGR 130 (738)
Q Consensus 83 I~s~~~afa----~---------------------------~~~~liI~r~l~G~g~G~~~~-~~~a~IaE~~P~k~Rg~ 130 (738)
+..+++++. + +.|...+.-+...+-.....+ ....+++|.++.++-.|
T Consensus 86 ~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakR 165 (472)
T TIGR00769 86 GFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKR 165 (472)
T ss_pred HHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 777776653 1 122333333444454445555 67899999999999999
Q ss_pred hchHhHHHhhhhhHhhHHHHHHHH
Q 004673 131 LNTLPQFTGSGGMFLAYCMVFGMS 154 (738)
Q Consensus 131 ~~~~~~~~~~~G~~I~~~~~~~l~ 154 (738)
..+++..+.++|.++++.......
T Consensus 166 fy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 166 FYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999976665554
No 236
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.22 E-value=1.7e-05 Score=89.24 Aligned_cols=126 Identities=14% Similarity=0.170 Sum_probs=99.5
Q ss_pred HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHh----hhCChHH-HHHHHHHHHHHHHHHHhhhhH------
Q 004673 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRPM-LILSSVLYFVSGLVMLWSPNV------ 94 (738)
Q Consensus 26 ~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsD----RfGRR~~-LliglvI~aI~s~~~afa~~~------ 94 (738)
....+++.+.+|++....+.+--+..+...+.+++.|..+| ||||||. +.++.+..+++.++..++.++
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 34567788899999999998888888889999999999999 5887665 555677777888888776443
Q ss_pred -----------HHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhh-hchHhHHHhhhhhHhhHHHHH
Q 004673 95 -----------YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGR-LNTLPQFTGSGGMFLAYCMVF 151 (738)
Q Consensus 95 -----------~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~-~~~~~~~~~~~G~~I~~~~~~ 151 (738)
.+++++--+.=++......+.-+++.|...+.++.+ +++.+..+.++|..+||..+.
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 344444445556666777888999999998777766 999999999999999987765
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.19 E-value=7.8e-05 Score=85.01 Aligned_cols=138 Identities=19% Similarity=0.201 Sum_probs=110.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHH-hhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q 004673 13 IGNFLQGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (738)
Q Consensus 13 L~~~~~g~~~~~~~~~lp~L~~-dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa 91 (738)
+.+++......+.+....++.+ .+|.++....+.......+..++.+++..+++|+|+|+++.++.++.+++.++..+.
T Consensus 243 ~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~ 322 (467)
T COG2211 243 LMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT 322 (467)
T ss_pred HHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhh
Confidence 3455555555555555565544 467777777788888888888889999999999999999999999999999999886
Q ss_pred h--hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCc-------chhhhhchHhHHHhhhhhHhhHHHH
Q 004673 92 P--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCMV 150 (738)
Q Consensus 92 ~--~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~-------k~Rg~~~~~~~~~~~~G~~I~~~~~ 150 (738)
+ +...+++..++.++|.+...+...++++|..+- ++-|...+...++.=+|.+++..+.
T Consensus 323 ~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 323 PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 5 789999999999999999999999999998862 2237777777777778887775443
No 238
>PRK11462 putative transporter; Provisional
Probab=98.16 E-value=0.00025 Score=80.71 Aligned_cols=131 Identities=15% Similarity=0.167 Sum_probs=83.8
Q ss_pred HhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--hhHHHH
Q 004673 20 WDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--PNVYVL 97 (738)
Q Consensus 20 ~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa--~~~~~l 97 (738)
......+....++.+...-++...+.+...+.++..++.+++++++||+|+|+++..+..+.++..++..+. .+...+
T Consensus 242 ~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (460)
T PRK11462 242 LAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITM 321 (460)
T ss_pred HHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Confidence 333333444445555443344556677788888999999999999999999998876655554444443332 233344
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhhcCC-------cchhhhhchHhHHHhhhhhHhhHHHH
Q 004673 98 CIARLLDGFGVGLAVTLVPLYISETAP-------SEIRGRLNTLPQFTGSGGMFLAYCMV 150 (738)
Q Consensus 98 iI~r~l~G~g~G~~~~~~~a~IaE~~P-------~k~Rg~~~~~~~~~~~~G~~I~~~~~ 150 (738)
++.-++.|++.+...+...++++|..+ .++.|...+...+..-+|..++..+.
T Consensus 322 ~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~ 381 (460)
T PRK11462 322 FVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALI 381 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 555567788887777777788888776 23235555555566666776665444
No 239
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.14 E-value=0.0032 Score=70.92 Aligned_cols=133 Identities=13% Similarity=0.134 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcc
Q 004673 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (738)
Q Consensus 47 ~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k 126 (738)
.-+-.+-..+..++..++.+|+..+.=+.++.++.++|.++.++++|++.=+++=++.+++.|..-.....+.. .+++
T Consensus 65 lladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~- 142 (402)
T PF02487_consen 65 LLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK- 142 (402)
T ss_pred HHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc-
Confidence 33333455566677888899998766677777889999999999999999889999999999888777666544 5553
Q ss_pred hhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccC
Q 004673 127 IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (738)
Q Consensus 127 ~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpE 185 (738)
.+.+-+.++.+.+.++|+..-..... ...+-|..+.+...+.++.++..++.+|.
T Consensus 143 ---~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 143 ---SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred ---cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 34556666666666666544433332 34456888888887776644433344443
No 240
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.13 E-value=3.1e-05 Score=89.27 Aligned_cols=150 Identities=12% Similarity=0.016 Sum_probs=107.2
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 004673 556 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYF 635 (738)
Q Consensus 556 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 635 (738)
.++...+.+.+.++ ..++.+++.+.++.|.||++-.+.+....++..+..++-...... ..++++-++.
T Consensus 76 l~~~~~~l~~~~t~-F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~----------~~~ialr~ll 144 (495)
T KOG2533|consen 76 LKLVGNQLGVLDTV-FYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSF----------PGLIALRFLL 144 (495)
T ss_pred cchhhhhhhhHHHH-HHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhh----------HHHHHHHHHH
Confidence 44444555566555 568999999999999999995555444433332222222111111 2344444445
Q ss_pred HHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHH------hhcchhHHHHHHHHHHHHHHHHH
Q 004673 636 CCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS------SIGLAGAFGVYAVVCFISWVFVF 709 (738)
Q Consensus 636 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~ 709 (738)
..+..+..|....++...+.++.|+.-+|+.++...+|+++++.+...+.+ ..||++.|.+-++++++..++++
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 555555556555888999999999999999999999999999999988643 35899999999999999999999
Q ss_pred HhccCCC
Q 004673 710 LRVPETK 716 (738)
Q Consensus 710 ~~~~e~~ 716 (738)
+++|+..
T Consensus 225 ~~lp~~P 231 (495)
T KOG2533|consen 225 FFLPDNP 231 (495)
T ss_pred EEecCCh
Confidence 9998643
No 241
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.13 E-value=7e-05 Score=89.13 Aligned_cols=153 Identities=14% Similarity=0.172 Sum_probs=121.6
Q ss_pred HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh-hCChHHHHHHHHHHHHHHHHHHhhh--------hHHH
Q 004673 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSGLVMLWSP--------NVYV 96 (738)
Q Consensus 26 ~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR-fGRR~~LliglvI~aI~s~~~afa~--------~~~~ 96 (738)
+..+.++.+.+|++.+....+...+.....+..+++|+++|+ +|++++++++.+++.+|.++.+++. ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 445567778899999999999999999999999999999996 5999999999999999998887742 1234
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhcCCcc---hhhhhchHhHHHhhhhhHhhHHHHHHHHHh-----ccchhHHHHHHH
Q 004673 97 LCIARLLDGFGVGLAVTLVPLYISETAPSE---IRGRLNTLPQFTGSGGMFLAYCMVFGMSLL-----ASPSWRLMLGVL 168 (738)
Q Consensus 97 liI~r~l~G~g~G~~~~~~~a~IaE~~P~k---~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~-----~~~~Wr~~~~I~ 168 (738)
++++-.+.++|.|+.-++..+...|.++++ +|-....++..+.++|++++..+....... ...+|.+.|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 667788889999999999999999999754 356677788888888888875554433211 134799999999
Q ss_pred HHHHHHHHHH
Q 004673 169 SIPALLYFAF 178 (738)
Q Consensus 169 ail~~~~~~~ 178 (738)
+++.++.+++
T Consensus 168 ~i~m~ia~lv 177 (654)
T TIGR00926 168 AILMILALIV 177 (654)
T ss_pred HHHHHHHHHH
Confidence 8888776644
No 242
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.10 E-value=2.3e-05 Score=89.34 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=104.0
Q ss_pred HhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHH
Q 004673 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS----------PNVYVLCIARLL 103 (738)
Q Consensus 34 ~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa----------~~~~~liI~r~l 103 (738)
+.+|.++...|++.+...++..++....+++.+|++.|+++.++.++.+++.+...+. ++.+.++..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 5689999999999999999999999999999999999999999999999988665321 333455566789
Q ss_pred HHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHH
Q 004673 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 104 ~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l 153 (738)
.+++.+..+.+...++.+..|++.+|...++..+..++|..++...+...
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997554444
No 243
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.09 E-value=0.00024 Score=78.30 Aligned_cols=163 Identities=21% Similarity=0.223 Sum_probs=121.4
Q ss_pred HHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhhhHHH
Q 004673 18 QGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSPNVYV 96 (738)
Q Consensus 18 ~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf-GRR~~LliglvI~aI~s~~~afa~~~~~ 96 (738)
+.....+.-..+|.+..|-|+|..+.|++.+...+.....++....+++|. .+|+..+....++.++.+.+.+.+....
T Consensus 220 qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~ 299 (395)
T COG2807 220 QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLP 299 (395)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 344445555677999999999999999999999999999999999999965 5788888888888899888888765444
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhcCCcch-hhhhchHhHHHhhhhhHhhHHHHH-HHHHh-ccchhHHHHHHHHHHHH
Q 004673 97 LCIARLLDGFGVGLAVTLVPLYISETAPSEI-RGRLNTLPQFTGSGGMFLAYCMVF-GMSLL-ASPSWRLMLGVLSIPAL 173 (738)
Q Consensus 97 liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~-Rg~~~~~~~~~~~~G~~I~~~~~~-~l~l~-~~~~Wr~~~~I~ail~~ 173 (738)
+.. -++.|+|.|..++...+++....+..+ -+...++. .++|..++.+-.. .+.+. ...+|+..+...+..++
T Consensus 300 ~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgma---Qg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i 375 (395)
T COG2807 300 ILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMA---QGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATL 375 (395)
T ss_pred HHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHh---hhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHH
Confidence 433 489999999999999999998876544 34455544 4555555433222 22222 33589999998888887
Q ss_pred HHHHHHhhccc
Q 004673 174 LYFAFAVFFLP 184 (738)
Q Consensus 174 ~~~~~i~~flp 184 (738)
+..++.+..-|
T Consensus 376 ~m~i~Gl~a~r 386 (395)
T COG2807 376 LMLIFGLRAGR 386 (395)
T ss_pred HHHHHHhhcch
Confidence 76665555444
No 244
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.04 E-value=9.8e-08 Score=106.18 Aligned_cols=144 Identities=14% Similarity=0.100 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcC
Q 004673 564 SFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYG 643 (738)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 643 (738)
..+......++.++|.+++|+++||+|||+.+..+..+.+++.++..+..... ..+...++-++.+++.+.. .
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~------~~~~~~~~R~~~G~~~g~~-~ 120 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYN------NFWMLLIGRFLIGFGIGGA-Y 120 (451)
T ss_pred HHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccc------ccccccccccccccccccc-c
Confidence 34455667799999999999999999999999999999999888887765221 1112222223333333333 3
Q ss_pred cchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhc---chhHHHHHHHHHHHHHHHHHHhccCC
Q 004673 644 PIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG---LAGAFGVYAVVCFISWVFVFLRVPET 715 (738)
Q Consensus 644 ~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~e~ 715 (738)
+...+++.|..|++.|+...++.+....+|.+++..+...+....+ |+..+.+.++.+++..+ ...++||+
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pES 194 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 4455888999999999999999888888888887777655433333 88777666666655444 44568876
No 245
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.03 E-value=0.0001 Score=77.85 Aligned_cols=165 Identities=18% Similarity=0.183 Sum_probs=106.0
Q ss_pred hhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 004673 531 SGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILV 610 (738)
Q Consensus 531 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~ 610 (738)
...+.+..|.|++-++.++ |.+ ....++....++..+| +++|.+.|++|.+.+++++.....++..++.
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~---------sq~-~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~ 84 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGY---------SQS-QLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLW 84 (250)
T ss_pred CcccchhhhhHHHHHHhCC---------CHH-HHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 3456688899988877554 443 3444445566777664 7889999999999999999999999988776
Q ss_pred HHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcC-cchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhc
Q 004673 611 ISETLQLISPVLKAGISTACVIIYFCCFVAAYG-PIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 689 (738)
Q Consensus 611 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g 689 (738)
...... . +.. ..+..+++.+..+.+.++. ......+.+.||. .||++.|+.-....+++.+-+.+...+.+. +
T Consensus 85 l~~~~~-i-~~~--~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~ 158 (250)
T PF06813_consen 85 LAVSGR-I-PSL--PVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-D 158 (250)
T ss_pred HHHhCc-c-Ccc--chHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-C
Confidence 654322 1 111 2222333333333443332 2233455689985 699999999999999999988888777655 3
Q ss_pred chhHHHHHHHHHHHHHHHHHHhc
Q 004673 690 LAGAFGVYAVVCFISWVFVFLRV 712 (738)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~ 712 (738)
....+.+.+....+..++...++
T Consensus 159 ~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 159 PSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhe
Confidence 33334444444444444444444
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.03 E-value=3.8e-05 Score=86.52 Aligned_cols=120 Identities=13% Similarity=0.005 Sum_probs=84.0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHh
Q 004673 559 SSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCF 638 (738)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 638 (738)
-++....+.+....++.++|.++.|++.|++|||+++...+.+++++.++........ ...-.+..++++-...
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~------~~~~~m~~L~~~R~~L 154 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTT------SPLGVMMTLCFFRFLL 154 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCC------CCcchhhHHHHHHHHh
Confidence 3456667777888899999999999999999999999999999999888555543222 1111222333333333
Q ss_pred hhhc---CcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHH
Q 004673 639 VAAY---GPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVM 684 (738)
Q Consensus 639 ~~~~---~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~ 684 (738)
+.+. -|...+++.|..-.+.||.-.+..-++..+|...+..+.-.+
T Consensus 155 GiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv 203 (538)
T KOG0252|consen 155 GIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIV 203 (538)
T ss_pred hccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHH
Confidence 3333 467778999999999999988887777766665555544433
No 247
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.02 E-value=8.7e-05 Score=84.92 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhh
Q 004673 571 TTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILC 650 (738)
Q Consensus 571 ~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (738)
.++..++.+.+-|.++|++|||..++.....+.+..+.+.+... .. +++....+...++....+.++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~-----------~~--~~~~~l~g~~~~~~s~~~a~v 137 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGY-----------WF--FLLLGLSGGFSAIFSVGFAYV 137 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHH-----------HH--hhhcccccchhhhhhhhhhhe
Confidence 36777788889999999999999999988888777776665331 11 113333344444555667899
Q ss_pred cccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCCCChh
Q 004673 651 AEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLE 721 (738)
Q Consensus 651 ~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~ 721 (738)
+++...+.|...+|+.+...+.+..++|.+.+.+.+..|+...|.+.++..+++.++..+++||+...+.+
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998665544
No 248
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.02 E-value=3.5e-05 Score=68.40 Aligned_cols=81 Identities=12% Similarity=0.147 Sum_probs=75.3
Q ss_pred HHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 004673 18 QGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVL 97 (738)
Q Consensus 18 ~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~l 97 (738)
.|..+..+.+.+|.+++|.++|.++.+++.+...+||.+|.+...++.++..+++.+..++++..+..+.+++..+.+..
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 46778889999999999999999999999999999999999999999999899999999999999999999999887654
Q ss_pred H
Q 004673 98 C 98 (738)
Q Consensus 98 i 98 (738)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 3
No 249
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.00 E-value=0.00023 Score=70.11 Aligned_cols=109 Identities=22% Similarity=0.212 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcC
Q 004673 44 GLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETA 123 (738)
Q Consensus 44 GLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~ 123 (738)
-.-.++.....++.+++.+.+.+++|.|+.+++|.+.+.+-.+.. +-++.+.++.+-.+.|+|.+..++....++.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 344566666778888889999999999999999999998666554 4567889999999999999999999999999999
Q ss_pred CcchhhhhchHhHHHhhhhhHhhHHHHHHH
Q 004673 124 PSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 124 P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l 153 (738)
+++.|++-.++.......+.++|.+..+..
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888877777877776555544
No 250
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.98 E-value=0.062 Score=61.35 Aligned_cols=169 Identities=15% Similarity=-0.022 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhC-CChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLN-LGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfG-lS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~ 86 (738)
...++.+.++..|+.-+.....+.+..+.. -+---.+...-+-.+..++.++..|.+.||..|.+++-.+.++--++..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 345788888888888888888887666653 2333334444444556777888889999999999988777655433333
Q ss_pred HHHh------h--h-----h--HHHHHHHHHHHHHHHhhh-hhhHHHHHhhcC------CcchhhhhchHhHHHhhhhhH
Q 004673 87 VMLW------S--P-----N--VYVLCIARLLDGFGVGLA-VTLVPLYISETA------PSEIRGRLNTLPQFTGSGGMF 144 (738)
Q Consensus 87 ~~af------a--~-----~--~~~liI~r~l~G~g~G~~-~~~~~a~IaE~~------P~k~Rg~~~~~~~~~~~~G~~ 144 (738)
+++. . . + ...+++.-.+.|.-.-.. .....+.=.||. ++..+.+.|+...-.--+..+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 3221 1 1 1 111122222222111111 111122223343 345567777777777777888
Q ss_pred hhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 004673 145 LAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (738)
Q Consensus 145 I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~ 178 (738)
++|+.. +......+.+....+.++..++.+.+
T Consensus 164 laPl~v--G~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 164 LAPLFV--GLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHH--HHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 885444 33345457777777777777666544
No 251
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.95 E-value=0.00017 Score=77.13 Aligned_cols=121 Identities=13% Similarity=0.116 Sum_probs=92.9
Q ss_pred HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHh
Q 004673 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS-GLVMLWSPNVYVLCIARLLDGFGVG 109 (738)
Q Consensus 31 ~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~-s~~~afa~~~~~liI~r~l~G~g~G 109 (738)
.+++.||+|+...+.+.+....-.++.+++.|.++||+|++...+.+..+..+. -....| +.+.=.++-.+.|....
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHH
Confidence 478899999999999998888888999999999999999998887766554443 322222 33333455567777766
Q ss_pred hhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHH
Q 004673 110 LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 110 ~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l 153 (738)
.........++-..|.++-|++.++.|...++|.++.+++....
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 66555667788888999999999999999999999886655443
No 252
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.93 E-value=5.6e-05 Score=86.55 Aligned_cols=154 Identities=18% Similarity=0.131 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004673 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARL 102 (738)
Q Consensus 23 ~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~ 102 (738)
+.+...+=--.+|++..+...|........|-+..-++++++..|+|+-+++.+++.+..+=.+..++..|.|..+..-+
T Consensus 388 ~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPiei 467 (618)
T KOG3762|consen 388 GLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEI 467 (618)
T ss_pred HHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHH
Confidence 33333333456788888888888888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHH-HhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 004673 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF-TGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (738)
Q Consensus 103 l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~-~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~ 178 (738)
++|+..+..|.+..+|++...||+.|..+.++.+. ...+|--+|++++... ....+=|..|.+.++.|++.+++
T Consensus 468 lqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~--v~~fg~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 468 LQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFV--VERFGARTTFRIFGIACLVTLAL 542 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhh--heeehhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888764 4455655554444333 45568899999999988887654
No 253
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.89 E-value=0.00041 Score=73.75 Aligned_cols=103 Identities=22% Similarity=0.317 Sum_probs=76.2
Q ss_pred HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhh
Q 004673 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGL 110 (738)
Q Consensus 31 ~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~ 110 (738)
++-+.++....++|.+..+.+-..++.+.+.|-|+|+.|||+.-+.-.+.+.++++ .-.++.|-+|+++|.+.|++.+.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsL 140 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSL 140 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHH
Confidence 45567788888899888777778888889999999999999976555555544442 33467899999999999999999
Q ss_pred hhhhHHH-HHhhcCCcchhhhhchHhH
Q 004673 111 AVTLVPL-YISETAPSEIRGRLNTLPQ 136 (738)
Q Consensus 111 ~~~~~~a-~IaE~~P~k~Rg~~~~~~~ 136 (738)
.+...-+ +++|.. ++|+.---++.
T Consensus 141 LFSaFEsWliaEHn--ekr~FeqqWls 165 (454)
T KOG4332|consen 141 LFSAFESWLIAEHN--EKRGFEQQWLS 165 (454)
T ss_pred HHHHHHHHHHHHhh--hccCChHhhhh
Confidence 8887755 456655 34554433333
No 254
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.77 E-value=0.00036 Score=76.43 Aligned_cols=153 Identities=15% Similarity=0.143 Sum_probs=113.4
Q ss_pred HhhCCChhHHH-HHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhh
Q 004673 34 KDLNLGTTVEG-LVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAV 112 (738)
Q Consensus 34 ~dfGlS~s~iG-Li~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~ 112 (738)
.+.+++..+.. =+.-+..-.+.+.-.+.=.+.|-.-.|+++++-.+.+.+..++..+.++.+.+=+.-++-|...+.-
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE- 112 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE- 112 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-
Confidence 34456654443 1223333455666666668999999999999988888888888899999999999999999987765
Q ss_pred hhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCCch
Q 004673 113 TLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (738)
Q Consensus 113 ~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~ 188 (738)
.+.++|+.+.++++++-++.+....+.-.|...|.+.+-.+...+..++...-.+......+.. +..+++|..+|
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~-~~A~fLP~v~r 187 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAV-LLALFLPRVKR 187 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHH-HHHhhCCCCch
Confidence 6788999999999999999999999999999999877777666666666666555443333333 33566666543
No 255
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.73 E-value=0.019 Score=67.58 Aligned_cols=161 Identities=17% Similarity=0.210 Sum_probs=118.7
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhhh----------
Q 004673 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSPN---------- 93 (738)
Q Consensus 25 ~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRf-GRR~~LliglvI~aI~s~~~afa~~---------- 93 (738)
....+.++..+++.+...+.-..+.+.-......+.+++++|.| ||-+++.++.+++.+|.++..++..
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 45677889999999988888888888888888889999999976 8999999999999998766654321
Q ss_pred ---------------HHHHHHHHHHHHHHHhhhhhhHHHHHhhcCC---cch-hh--hhchHhHHHhhhhhHhhHHHHHH
Q 004673 94 ---------------VYVLCIARLLDGFGVGLAVTLVPLYISETAP---SEI-RG--RLNTLPQFTGSGGMFLAYCMVFG 152 (738)
Q Consensus 94 ---------------~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P---~k~-Rg--~~~~~~~~~~~~G~~I~~~~~~~ 152 (738)
...+..+..+..+|.|+.-+...++-+|.++ +++ +. ..+.++.+..++|..++. ...
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~--t~~ 214 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQ--TVL 214 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHH--HHH
Confidence 1356666778888999999999999999998 322 23 456667777788888873 333
Q ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHhhcccCCchhh
Q 004673 153 MSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWL 190 (738)
Q Consensus 153 l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpESp~~~ 190 (738)
...-++.+|.+-|.++.+..++.+ ++|++-+|.|.
T Consensus 215 vyiq~~~~w~lgf~i~~~~~~lai---~iF~~g~~~y~ 249 (571)
T KOG1237|consen 215 VYIQDNVGWKLGFGIPTVLNALAI---LIFLPGFPFYR 249 (571)
T ss_pred HhhhhcccceeeccHHHHHHHHHH---HHHHcCceeEE
Confidence 333356799999988887665533 34444454443
No 256
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.72 E-value=0.00061 Score=76.94 Aligned_cols=127 Identities=21% Similarity=0.210 Sum_probs=89.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhh
Q 004673 560 SESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFV 639 (738)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 639 (738)
+...+.+.+.++.+..++..+.++|+.||+|-|..++++..+.+++..+=.+....+ ..+.....+......+-.....
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~-v~~~f~~~l~~~Gq~iaa~Aq~ 155 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPF-VPPLFRRPLTHTGQSIAAAAQP 155 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCcc-ccccchhhhhHHhHHHHHHhhh
Confidence 356778888889999999999999999999999999999999999887776654432 1111111122222222222211
Q ss_pred hhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhh
Q 004673 640 AAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 688 (738)
Q Consensus 640 ~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~ 688 (738)
+..+ ++.-+.+-.||+++|.+|..++.+.+.+|..++..+-+.++.+.
T Consensus 156 Fim~-lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 156 FILG-LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred Hhhc-cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 1111 22233355799999999999999999999999999888887654
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.65 E-value=0.0028 Score=70.00 Aligned_cols=153 Identities=16% Similarity=0.099 Sum_probs=93.0
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 004673 556 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYF 635 (738)
Q Consensus 556 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 635 (738)
+|++..+.+.++.... ...++...+.|.+.||+|||+..++..++.+++++.--... + .+.++.=++.+
T Consensus 64 yg~~~~qIa~Lf~~Gf-~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~-~---------~~L~~GRvlgG 132 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGF-ASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSN-Y---------PVLLLGRVLGG 132 (354)
T ss_pred cCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccc-c---------HHHHHHHHHHH
Confidence 6677778888876654 55555666788999999999999998888888776432211 1 11111111111
Q ss_pred HHhhhhcCcchhhhhcc----cCcccchhhhhHHHH-HhhhHHHHHHhhhHHHHHHhhcc--hhHHHHHHHHHHHHHHHH
Q 004673 636 CCFVAAYGPIPNILCAE----IFPTKVRGICIAICA-MAYWICDIIVTYTLPVMLSSIGL--AGAFGVYAVVCFISWVFV 708 (738)
Q Consensus 636 ~~~~~~~~~~~~~~~~e----~~p~~~r~~~~gi~~-~~~~i~~~i~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~ 708 (738)
+.....+...=.=++.| -+|.+..+..++... ..+.+-+++...+...+.+..|. ..+|....++..++.++.
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 11111111100011223 356666666666555 34455667777777777777654 677888777888887777
Q ss_pred HHhccCCCCCC
Q 004673 709 FLRVPETKGMP 719 (738)
Q Consensus 709 ~~~~~e~~~~~ 719 (738)
....+|+.|.+
T Consensus 213 ~~~W~ENyg~~ 223 (354)
T PF05631_consen 213 LKTWPENYGDT 223 (354)
T ss_pred HhcccccCCCc
Confidence 77778887763
No 258
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.0034 Score=70.26 Aligned_cols=163 Identities=13% Similarity=0.085 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 9 IAATIGNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 9 lil~L~~~~~g~~~~~~~~~lp~L~~d-fGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
..-.++.|+..-....+...++.+..+ .|++..+.....+.+..+.++|.+++.++..|+...|++.+..++..+-++.
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~ 318 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLA 318 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 344556666665666666666666665 8999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHH
Q 004673 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (738)
Q Consensus 88 ~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I 167 (738)
.++++++..+ .+-++.|+..+..+|...+...+..| ++-....++..++...|+++ |...++..+..+-...+.+
T Consensus 319 ~~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~maivGGAii---P~l~G~i~d~~g~~~~~~~ 393 (422)
T COG0738 319 VALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVMAIVGGAII---PPLQGVIADMFGIQLTFLI 393 (422)
T ss_pred HHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeeeheecchHH---HHHHHHHHHhhhhHHHHHH
Confidence 9999995554 46678899999999999999999998 54555555555554444444 5555666777788888876
Q ss_pred HHHHHHHHH
Q 004673 168 LSIPALLYF 176 (738)
Q Consensus 168 ~ail~~~~~ 176 (738)
...+|.+..
T Consensus 394 ~pllc~lyV 402 (422)
T COG0738 394 VPLLCYLYV 402 (422)
T ss_pred HHHHHHHHH
Confidence 666666644
No 259
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.65 E-value=0.0013 Score=78.34 Aligned_cols=152 Identities=18% Similarity=0.230 Sum_probs=99.2
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 004673 556 LGISSESASFLISAFTTFLMLPCIGVAMKLMD-VAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 634 (738)
Q Consensus 556 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d-~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 634 (738)
+|.+...+...+..+..+..+ ..+++|++.| ++||++.++.+.++..++.+++.+..... ..........+..+.+.
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl-~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~-~~~~~~~~~~l~gLaLi 95 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYL-TPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPS-SGHPLHDLLDLLGLALI 95 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcc-cccchHHHHHHHHHHHH
Confidence 456666677777666655555 4568889999 67999999999999888888777643211 00000111111122222
Q ss_pred HHHhhhhcCcchhhhhcccCccc---chhhhhHHHHHhhhHHHHHHhhhHHHHHHhh-------cchhHHHHHHHHHHHH
Q 004673 635 FCCFVAAYGPIPNILCAEIFPTK---VRGICIAICAMAYWICDIIVTYTLPVMLSSI-------GLAGAFGVYAVVCFIS 704 (738)
Q Consensus 635 ~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~ 704 (738)
.++ ..+.-+...+...+.++.+ .|-..+.+..++.++|+++++.+.+.+.+.. +|..+|.+.+++.+++
T Consensus 96 a~G-~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia 174 (654)
T TIGR00926 96 ALG-TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILA 174 (654)
T ss_pred Hhh-ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHH
Confidence 222 2223344447778888754 3667888889999999999999999887554 5777888887777777
Q ss_pred HHHHHH
Q 004673 705 WVFVFL 710 (738)
Q Consensus 705 ~~~~~~ 710 (738)
.++...
T Consensus 175 ~lvf~~ 180 (654)
T TIGR00926 175 LIVFMA 180 (654)
T ss_pred HHHHHH
Confidence 666554
No 260
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.56 E-value=0.00061 Score=59.28 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~ 81 (738)
+-.-+|+.....+++.|.+|...++.|++..++|.+.++..+...++.+++|.++||+++++.++....+.
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34455666667788888888888899999999999999999999999999999999999988877766543
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.40 E-value=0.012 Score=65.69 Aligned_cols=142 Identities=20% Similarity=0.190 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHh-----hhCChHHHH-HHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD-----WLGRRPMLI-LSSVLY 81 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsD-----RfGRR~~Ll-iglvI~ 81 (738)
+..+.+-++++|...+.+. .+|.+.+.-|.|.++.+...-++. =...-+++..+.| |+||||.-+ -+..+.
T Consensus 33 illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ll 109 (510)
T KOG3574|consen 33 ILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLL 109 (510)
T ss_pred HHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHHHH
Confidence 3455666788898888887 899999988998887765433321 1223467888888 999988432 233333
Q ss_pred HHHHHHHHh-----------hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHH
Q 004673 82 FVSGLVMLW-----------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (738)
Q Consensus 82 aI~s~~~af-----------a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~ 150 (738)
+..+++.+. .++...+...-++.-+.++..-.+.-.+...+..+++-|.+.+....+...|.+++..+.
T Consensus 110 G~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 110 GLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 333333332 245555555666777777777777778888889999999999999999999999886554
Q ss_pred HH
Q 004673 151 FG 152 (738)
Q Consensus 151 ~~ 152 (738)
+.
T Consensus 190 La 191 (510)
T KOG3574|consen 190 LA 191 (510)
T ss_pred eE
Confidence 44
No 262
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.24 E-value=0.02 Score=64.31 Aligned_cols=149 Identities=11% Similarity=0.047 Sum_probs=119.9
Q ss_pred HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHh-hhCChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHH
Q 004673 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD-WLGRRPMLILSSVLYFVSGLVMLW---SPNVYVLCIARLL 103 (738)
Q Consensus 28 ~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsD-RfGRR~~LliglvI~aI~s~~~af---a~~~~~liI~r~l 103 (738)
.-|+=.+-||++..+...+...+..|..++-...|++.. |.+++++-.++..+.+++..+..+ ..+.+.+...-++
T Consensus 231 LEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 231 LEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred cCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 346677789999999999999999999999999998877 778888888888877777666554 4578899999999
Q ss_pred HHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHH-----Hh---ccchhHHHHHHHHHHHHHH
Q 004673 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS-----LL---ASPSWRLMLGVLSIPALLY 175 (738)
Q Consensus 104 ~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~-----l~---~~~~Wr~~~~I~ail~~~~ 175 (738)
.|+|.|.+.....+.+-+...+++.|..++.......+...++...+.... .. ...+|-.+|.+-++.-++.
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888888777755544322 11 2246778888777766554
Q ss_pred H
Q 004673 176 F 176 (738)
Q Consensus 176 ~ 176 (738)
.
T Consensus 391 ~ 391 (403)
T PF03209_consen 391 L 391 (403)
T ss_pred H
Confidence 4
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.16 E-value=0.4 Score=54.82 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=27.5
Q ss_pred CcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhh
Q 004673 643 GPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYT 680 (738)
Q Consensus 643 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~ 680 (738)
+.....+.++.++++.|..+..+...+..+|-.+|..+
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445667788888999888888777777777766654
No 264
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.92 E-value=0.0083 Score=69.02 Aligned_cols=146 Identities=10% Similarity=-0.017 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH--HHhh
Q 004673 563 ASFLISAFTTFLMLPCIGVAMKLMDVAGR-RKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYF--CCFV 639 (738)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gr-r~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~--~~~~ 639 (738)
...+..+...++.+++.++.++...|.+. |+.++.+.++++++.++........ . . ....+++.- ++++
T Consensus 72 ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~----~--~--~~y~mL~~R~l~Gvg 143 (488)
T KOG2325|consen 72 FFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP----N--G--VKYLMLVARILTGVG 143 (488)
T ss_pred hhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc----c--c--hHHHHHHHHHHcCcC
Confidence 34455566789999999999999999885 7777888888888888875544433 0 0 122222222 2333
Q ss_pred hhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhh-------------cchhHHHHHHHHHHHHHH
Q 004673 640 AAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI-------------GLAGAFGVYAVVCFISWV 706 (738)
Q Consensus 640 ~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~~ 706 (738)
.+...+.=.|.+..--.+.|.++++......-+|.++||.+...+.... -+..+-++.++++++.++
T Consensus 144 ~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 144 VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 3333344477777777777888888887777788888887766543221 134455788888888888
Q ss_pred HHHHhccCCC
Q 004673 707 FVFLRVPETK 716 (738)
Q Consensus 707 ~~~~~~~e~~ 716 (738)
+.+++++|..
T Consensus 224 ~i~~~f~E~~ 233 (488)
T KOG2325|consen 224 IILFFFKEVY 233 (488)
T ss_pred HHHhheeecc
Confidence 8888887743
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.66 E-value=0.17 Score=58.46 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh--hCCChhHHHHHHHH-HHHHHHHHHHhHHHHH-----hhhCChHHHHH-HHHH
Q 004673 10 AATIGNFLQGWDNATIAGAIVYIKKD--LNLGTTVEGLVVAM-SLIGATAITTCSGPIS-----DWLGRRPMLIL-SSVL 80 (738)
Q Consensus 10 il~L~~~~~g~~~~~~~~~lp~L~~d--fGlS~s~iGLi~Sl-~~~g~a~~~~~~G~Ls-----DRfGRR~~Lli-glvI 80 (738)
++.+-++++|...+.....+|.+.++ -+.|.++.+...-+ +... .-+++..+. .|+||||.-++ .-.+
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfS---lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFS---LKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhH---HHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 45667788888888776788998888 78888887754321 1111 124455555 48999986443 2222
Q ss_pred HHHHHHHHHhhh------------------------hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhH
Q 004673 81 YFVSGLVMLWSP------------------------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQ 136 (738)
Q Consensus 81 ~aI~s~~~afa~------------------------~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~ 136 (738)
.++..+..+..- ++..|.+.-++.=+-++..-.++-.+...+..+++++.|.+...
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 223222222111 11122333323333334333444456666778888999999988
Q ss_pred HHhhhhhHhhHHHHHHH
Q 004673 137 FTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 137 ~~~~~G~~I~~~~~~~l 153 (738)
.+.+.|.++++.+.+.+
T Consensus 161 vG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLAL 177 (544)
T ss_pred hHhhhhHHHHHHHHHhh
Confidence 89999988886665554
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.43 E-value=0.031 Score=63.52 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=95.6
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhcc-----chhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-----GRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTA 629 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-----grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~ 629 (738)
.+|.++.+...+... ..+... .-++.|.++|-+ .||+.++++..+.+++++.++...... .+.....+
T Consensus 19 ~l~ls~~~~~~~~~~-~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~-----~s~~~~~~ 91 (433)
T PF03092_consen 19 DLGLSPAQLQRLSSL-ASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE-----SSAAIAVV 91 (433)
T ss_pred HcCCCHHHHHHHHHH-HhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc-----chhhhHHH
Confidence 466776555544332 223333 356889999966 355666666666655555555433211 11122222
Q ss_pred HHHHHHHHhhhhcCcchhhhhcccC---cccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHH
Q 004673 630 CVIIYFCCFVAAYGPIPNILCAEIF---PTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWV 706 (738)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 706 (738)
++++...++... -...-.+++|.. |.+ ||.-.+.+..+..+|++++..+.|.+.+..+++..|.+.+.+..+..+
T Consensus 92 ~l~la~~g~a~~-DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 92 LLFLASFGYAFA-DVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHH-HHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 222222222222 122335556664 444 777888889999999999999999999999999999988888888877
Q ss_pred HHHHhccCCCCC
Q 004673 707 FVFLRVPETKGM 718 (738)
Q Consensus 707 ~~~~~~~e~~~~ 718 (738)
..++..+|++.+
T Consensus 170 ~~~~~~~e~~~~ 181 (433)
T PF03092_consen 170 VALFLLEERKVR 181 (433)
T ss_pred HHHHhhhhcccc
Confidence 777777764433
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.43 E-value=0.13 Score=59.37 Aligned_cols=127 Identities=11% Similarity=-0.009 Sum_probs=82.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhh--------------h-hhh
Q 004673 560 SESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISP--------------V-LKA 624 (738)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~--------------~-~~~ 624 (738)
.+...++.........++..++.+++++|++|++++-......++.++++.....+..... . ...
T Consensus 42 ae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 42 AEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 3556666655443344444788999999999999998877777777766665533221100 0 000
Q ss_pred ------hHHHHHHHHHHHHhhhhcCc-chhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHH
Q 004673 625 ------GISTACVIIYFCCFVAAYGP-IPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 686 (738)
Q Consensus 625 ------~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~ 686 (738)
.+......+..-.++..... +.|.+++|++..++-.+-+++..+..++|.++++.+...+.+
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111122222223333333 668899999999999999999999999999999998888763
No 268
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.39 E-value=0.14 Score=50.76 Aligned_cols=129 Identities=18% Similarity=0.192 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCc
Q 004673 565 FLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGP 644 (738)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (738)
.+......+...++.++.|.+.||+|||+.+..+.....++.++..+... ............ .........+
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~g~~~~~~~~ 113 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN-------VGLALLLILRLL-QGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc-------chHHHHHHHHHH-HHhhhHHHHH
Confidence 33444456777777799999999999997777776553443233322221 011111111111 1122223445
Q ss_pred chhhhhcccCcc-cchhhhhHHHHH-hhhHHHHHHhhhHHHHHHh--hcchhHHHHHHHHH
Q 004673 645 IPNILCAEIFPT-KVRGICIAICAM-AYWICDIIVTYTLPVMLSS--IGLAGAFGVYAVVC 701 (738)
Q Consensus 645 ~~~~~~~e~~p~-~~r~~~~gi~~~-~~~i~~~i~~~~~~~~~~~--~g~~~~~~~~~~~~ 701 (738)
....+..|.+|. +.|+...++... ...++..+++.+.+.+... .+|+..|.+.....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 666888899998 678888888877 5777888888666666554 46666444444333
No 269
>PRK03612 spermidine synthase; Provisional
Probab=96.32 E-value=0.34 Score=56.70 Aligned_cols=144 Identities=14% Similarity=0.054 Sum_probs=83.4
Q ss_pred HHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHH---HHHHHHH----hhhhH-HHHHHHHHH
Q 004673 32 IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF---VSGLVML----WSPNV-YVLCIARLL 103 (738)
Q Consensus 32 L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~a---I~s~~~a----fa~~~-~~liI~r~l 103 (738)
+..-+|-+....+.+.+++..|.++|+.+++++.++.-++ ...+-+.+.. ++..+.. +...+ ..++..-++
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456788999999999999999999999998886432222 2222211111 1111111 11111 223344567
Q ss_pred HHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 004673 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (738)
Q Consensus 104 ~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~ 178 (738)
.|+..|+..|....+..+... ++-|...+-+.....+|+++|.+..... +....|-....++.+.+.++..++
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~v-Llp~lG~~~t~~~~a~l~~~~a~~ 192 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFL-LLPRLGLIRTAALTGSLNLLAALV 192 (521)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHHHHHH
Confidence 788888888887776655432 2235666777777888888876554333 333345444444555555554433
No 270
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.31 E-value=0.016 Score=63.96 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---------hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcc---hhhhhchHhHHHh
Q 004673 72 PMLILSSVLYFVSGLVMLWSP---------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE---IRGRLNTLPQFTG 139 (738)
Q Consensus 72 ~~LliglvI~aI~s~~~afa~---------~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k---~Rg~~~~~~~~~~ 139 (738)
|+++++.+++.+|.++..++. +...++++-++.++|.|+.=|....+++|.++++ +|....+++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 578899999999999855432 2367889999999999999999999999999865 4566778889999
Q ss_pred hhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 004673 140 SGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 140 ~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~ 177 (738)
++|..++..+.... .++.+|.+.|++.++..++.++
T Consensus 82 n~G~~~~~~~~~~i--~~~~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 82 NIGSLFSPTLVPYI--QQNYGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHHHCCCHH--HHCS-HHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhh--ccccchhhhhhHHHHHHHHHHH
Confidence 99999985444333 4667999999998887776553
No 271
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.29 E-value=3.3 Score=48.31 Aligned_cols=145 Identities=12% Similarity=0.133 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhhC---CChhHHHHHHHHHHH-HHHHHHHhHHHHHhhhCChHHHHHHHHHHH
Q 004673 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLN---LGTTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPMLILSSVLYF 82 (738)
Q Consensus 7 illil~L~~~~~g~~~~~~~~~lp~L~~dfG---lS~s~iGLi~Sl~~~-g~a~~~~~~G~LsDRfGRR~~LliglvI~a 82 (738)
-.+.+.+..|+..+..+.. -.+++.+= ..++.+..+-....+ ...+...+..++++++++.+++-+....+.
T Consensus 25 k~~~l~~m~f~i~f~y~~l----R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 25 KFLPLALMFFFILFNYTIL----RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3444455555554444332 33333221 133444444443333 445556778999999999999888777766
Q ss_pred HHHHHHHhh---------h----------------------hHHHHHHHHHHHHHHHhhhhh-hHHHHHhhcCCcchhhh
Q 004673 83 VSGLVMLWS---------P----------------------NVYVLCIARLLDGFGVGLAVT-LVPLYISETAPSEIRGR 130 (738)
Q Consensus 83 I~s~~~afa---------~----------------------~~~~liI~r~l~G~g~G~~~~-~~~a~IaE~~P~k~Rg~ 130 (738)
....++++. + +.|...+.-++.-+-.....+ .-..+..|.++.++-.|
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKR 180 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKR 180 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 666666541 0 112222222222222233333 45789999999999999
Q ss_pred hchHhHHHhhhhhHhhHHHHHHHHH
Q 004673 131 LNTLPQFTGSGGMFLAYCMVFGMSL 155 (738)
Q Consensus 131 ~~~~~~~~~~~G~~I~~~~~~~l~l 155 (738)
..+++..+.++|.+++.........
T Consensus 181 fYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 181 FYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988766655544
No 272
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.94 E-value=0.033 Score=48.50 Aligned_cols=66 Identities=21% Similarity=0.273 Sum_probs=49.3
Q ss_pred HHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 004673 526 ILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPV 601 (738)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~ 601 (738)
.+..+++...+.-|.|.++++.| +|+.+.+.+. .+..+..+++.++.|.++||+++++..+....+
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~G---------l~~~~iGil~-~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLG---------LSPSQIGILS-AIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcC---------CCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34455566777888888888754 5555555554 556788999999999999999999988766544
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.76 E-value=0.26 Score=56.40 Aligned_cols=151 Identities=15% Similarity=0.108 Sum_probs=103.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af 90 (738)
..++..+.+++--.+......+...-|+++..+|.+-+...+....++++..++.+|+|..|.-++++..-.+...++..
T Consensus 263 as~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~ 342 (432)
T PF06963_consen 263 ASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVV 342 (432)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHH
Confidence 34444444444333444444444455999999999999999999999999999999999998888887655444333332
Q ss_pred ---h---h----hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHHhccch
Q 004673 91 ---S---P----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (738)
Q Consensus 91 ---a---~----~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~ 160 (738)
. + +...++.+-.+.=+|-=.+-....-++-|..|+++||..++.-....++-.++.++.+.....-+.++
T Consensus 343 ~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~ 422 (432)
T PF06963_consen 343 SFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFG 422 (432)
T ss_pred HHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcC
Confidence 1 1 33444444444445554555667788999999999999999988888888887766665543333333
Q ss_pred h
Q 004673 161 W 161 (738)
Q Consensus 161 W 161 (738)
|
T Consensus 423 ~ 423 (432)
T PF06963_consen 423 W 423 (432)
T ss_pred h
Confidence 3
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.70 E-value=0.27 Score=48.63 Aligned_cols=143 Identities=7% Similarity=-0.032 Sum_probs=85.6
Q ss_pred HHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 004673 527 LQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSL 606 (738)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~ 606 (738)
++.+.++.......-.+++..+.+ ..-++++ ..+..-..+......++.+++..+.+++|.|+.++++..+.++..
T Consensus 6 ~~~Ftaf~t~~~i~~svi~s~~~~---~~~~i~~-~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~ 81 (156)
T PF05978_consen 6 MFLFTAFQTQSFIQESVIHSVHER---NPSSISA-GLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYI 81 (156)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhc---Ccccccc-cccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 334444554545555555443221 0012332 223333344445566677888899999999999999877776554
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHH
Q 004673 607 IILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVM 684 (738)
Q Consensus 607 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~ 684 (738)
...... ..+..+..-.+.+++.+..|.+-. .++.+...++.+++-.++...+...+.++|..+.-.+
T Consensus 82 ~~~~~~----------~~~~l~~~s~l~G~~~a~lW~aqg-~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 82 ASFFYP----------NSYTLYPASALLGFGAALLWTAQG-TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhh----------hHHHHHHHHHHHhhhhHHhhHhhh-HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443211 112334444455555555555554 5667888888999999998888888877777665544
No 275
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.43 E-value=0.65 Score=53.52 Aligned_cols=103 Identities=20% Similarity=0.194 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHH---hhhCChHHHHHHHHHHHHHHHHHHhh------------------hhHHHHHHHH
Q 004673 43 EGLVVAMSLIGATAITTCSGPIS---DWLGRRPMLILSSVLYFVSGLVMLWS------------------PNVYVLCIAR 101 (738)
Q Consensus 43 iGLi~Sl~~~g~a~~~~~~G~Ls---DRfGRR~~LliglvI~aI~s~~~afa------------------~~~~~liI~r 101 (738)
.++..-...+|..+++...+.++ +++||++.++++.++..++.++.-.. +++...++.-
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 33333344445555555566665 57899999999999999888887652 3577888889
Q ss_pred HHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhh
Q 004673 102 LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (738)
Q Consensus 102 ~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~ 146 (738)
++.|++-+...+..+.++...+ +++|..+.++..+-.+++..++
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 5558888888777777777664
No 276
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.28 E-value=0.77 Score=52.22 Aligned_cols=123 Identities=11% Similarity=0.065 Sum_probs=80.7
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 004673 556 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYF 635 (738)
Q Consensus 556 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 635 (738)
.|++.++...-+.-+.+=+.++.-++...+.|..+-|++++......++..+++.+..... ..-+..++|+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~---------~mq~~q~~yg 105 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVL---------AMQLMQFFYG 105 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHH---------HHHHHHHHHH
Confidence 4556555554444445556666677788999999999999999888777777765543322 2223333333
Q ss_pred HHhhhhcCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhc
Q 004673 636 CCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 689 (738)
Q Consensus 636 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g 689 (738)
...+.-. .-+.++=-.+|++.-.++.+.+.++.-+|.+++..++-.+++.-+
T Consensus 106 ~~~a~ev--ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~ 157 (412)
T PF01770_consen 106 LATAAEV--AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG 157 (412)
T ss_pred HHHHHHH--HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333321 222333346688877888999999999999999888887776444
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.75 E-value=1.8 Score=46.48 Aligned_cols=57 Identities=9% Similarity=0.236 Sum_probs=41.5
Q ss_pred chhhhhchHhHHHhhhhhHhhHHHHHHH---HHhccchhHHHHHHHHHHHHHHHHHHhhc
Q 004673 126 EIRGRLNTLPQFTGSGGMFLAYCMVFGM---SLLASPSWRLMLGVLSIPALLYFAFAVFF 182 (738)
Q Consensus 126 k~Rg~~~~~~~~~~~~G~~I~~~~~~~l---~l~~~~~Wr~~~~I~ail~~~~~~~i~~f 182 (738)
|+|+....+...+.++|.++..++.... .......|++.+.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5788888999999999999986665443 12223479999999998887766554433
No 278
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.50 E-value=0.52 Score=53.43 Aligned_cols=138 Identities=17% Similarity=0.142 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHH--HHHHHHH-
Q 004673 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL--YFVSGLV- 87 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI--~aI~s~~- 87 (738)
+.+.++..+...+.+.+.+. ...++.-..++.-+...+|.+|-.++.--...+ |+ |++.+.+.+- ..+..++
T Consensus 252 L~lVY~aEY~InqGv~~tl~-fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~ 326 (402)
T PF02487_consen 252 LFLVYFAEYFINQGVAPTLL-FPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQ 326 (402)
T ss_pred HHHHHHHHHHHHhchHHHhc-CCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHH
Confidence 45566666555444433321 112233345778888888888876664322211 23 3433333222 2222222
Q ss_pred --HHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHH
Q 004673 88 --MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 88 --~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l 153 (738)
.-+.+++|.+++.-+..|+..|..++-....+.|-.|+++|-.+++....+-++|..++.+++...
T Consensus 327 s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 327 SWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 234679999999999999999999999999999999999999999999999999999997776654
No 279
>PRK03612 spermidine synthase; Provisional
Probab=94.41 E-value=2.1 Score=50.22 Aligned_cols=50 Identities=14% Similarity=0.255 Sum_probs=35.9
Q ss_pred hhhhhHHHHHhhhHHHHHHhhhHHHHHH-hhcchhHHHHHHHHHHHHHHHH
Q 004673 659 RGICIAICAMAYWICDIIVTYTLPVMLS-SIGLAGAFGVYAVVCFISWVFV 708 (738)
Q Consensus 659 r~~~~gi~~~~~~i~~~i~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 708 (738)
-+...|-...+..+|+++|+.++++++- .+|...+.++.+++.++.++++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 3566788888999999999999988765 5776666666655555544433
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.36 E-value=3 Score=48.60 Aligned_cols=143 Identities=14% Similarity=0.043 Sum_probs=87.3
Q ss_pred HHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhh--h
Q 004673 542 QILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLI--S 619 (738)
Q Consensus 542 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~--s 619 (738)
.++++..+....... .++...++=.....-..++...+-.+++++++|.++.-+.+........++++...+... -
T Consensus 41 ~~lR~~KD~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lh 118 (491)
T PF03219_consen 41 TILRDLKDTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILH 118 (491)
T ss_pred HHHHHhcCeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcC
Confidence 455555444322222 445566655443334555566778899999999999887777766666666554332210 0
Q ss_pred hh-------------hhhhHHH----HHHHHHHH--Hhhhhc-CcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhh
Q 004673 620 PV-------------LKAGIST----ACVIIYFC--CFVAAY-GPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTY 679 (738)
Q Consensus 620 ~~-------------~~~~~~~----~~~~~~~~--~~~~~~-~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~ 679 (738)
+. .+..+.+ ...++|.. .++... .-..|.++.|+++.++-.+-.++.....+++.++++.
T Consensus 119 p~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~ 198 (491)
T PF03219_consen 119 PDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQ 198 (491)
T ss_pred CCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000 01122222 222222 2245889999999999999999999999999999999
Q ss_pred hHHHHHH
Q 004673 680 TLPVMLS 686 (738)
Q Consensus 680 ~~~~~~~ 686 (738)
+...+.+
T Consensus 199 ~~~~~~~ 205 (491)
T PF03219_consen 199 LTSYFSS 205 (491)
T ss_pred HHHHHHH
Confidence 9888877
No 281
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.02 E-value=0.057 Score=61.56 Aligned_cols=155 Identities=17% Similarity=0.135 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh----ccch
Q 004673 516 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMD----VAGR 591 (738)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d----~~gr 591 (738)
+.++....+.+..+++ +..-..|.+.+++++|++ ..-.+... ...-+.+++..++.|..+| |+||
T Consensus 32 ~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvp---------hk~~S~iw-~~gPi~G~~vQP~vG~~SDrc~sr~GR 100 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFG-WALELSYLTPYLQSLGVP---------HKWSSIIW-LCGPLSGLLVQPLVGSASDRCTSRYGR 100 (498)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCC---------cccccccc-cccccccceeccccccccccccccccc
Confidence 4445555555555664 444566777777776654 33333333 2334667778889999999 5787
Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHHhhhh-h----h-hhhhhHHHH--HHHHHHHHhhhhcCcchhhhhcccCcccchhh-
Q 004673 592 RKLLL-TTIPVLIVSLIILVISETLQLI-S----P-VLKAGISTA--CVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI- 661 (738)
Q Consensus 592 r~~l~-~~~~~~~v~~~~~~~~~~~~~~-s----~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~- 661 (738)
|+..+ .+.+..+++++++......... . . .....+++. .+.+.-+......+|.- ++.+++.-.+.+.+
T Consensus 101 RRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~r-a~L~Dl~~~d~~~~~ 179 (498)
T KOG0637|consen 101 RRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCR-ALLADLARGDAKKTR 179 (498)
T ss_pred ccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHH-HHHHHhccChhhhhc
Confidence 76554 4555666677766555443311 1 1 111112211 12222222233445555 67788887777777
Q ss_pred hhHHHHHhhhHHHHHHhhhHH
Q 004673 662 CIAICAMAYWICDIIVTYTLP 682 (738)
Q Consensus 662 ~~gi~~~~~~i~~~i~~~~~~ 682 (738)
+.+....+..+|+.++-.+.+
T Consensus 180 Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 180 ANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cchhHHHHHHhcceeeeeccc
Confidence 999988888888888777665
No 282
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.95 E-value=0.2 Score=55.20 Aligned_cols=118 Identities=13% Similarity=0.140 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCccc---chhhhhHHHHHh
Q 004673 593 KLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK---VRGICIAICAMA 669 (738)
Q Consensus 593 ~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~gi~~~~ 669 (738)
|.++++.++.+++.+++.+.................+.+.+..++.+ +.-|...++.+|.++++ .|...+....+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G-~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTG-GIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHH-CCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccc-cccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 45677788888888887776655422111222233333333222222 23344558888998876 355677788999
Q ss_pred hhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 004673 670 YWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLR 711 (738)
Q Consensus 670 ~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 711 (738)
.++|..+++.+.+++-+..||...|++.++..+++.+.++..
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999998888888777665543
No 283
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.73 E-value=12 Score=42.56 Aligned_cols=107 Identities=10% Similarity=-0.075 Sum_probs=53.3
Q ss_pred HHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHH---HHHHHHHHHHHh----
Q 004673 18 QGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSS---VLYFVSGLVMLW---- 90 (738)
Q Consensus 18 ~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~Lligl---vI~aI~s~~~af---- 90 (738)
.-+....+..+.++..+++..+.. .....+.+.+...+..++...+--+...|.-..++. ....+..+++.+
T Consensus 30 ~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l~~~~v~ 108 (406)
T KOG1479|consen 30 TLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTLDLALVK 108 (406)
T ss_pred cccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 344556666667788877755544 334444444444444444444433333222222221 111112222222
Q ss_pred -----hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcc
Q 004673 91 -----SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (738)
Q Consensus 91 -----a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k 126 (738)
...+...++.=.+.+++.|......+...++ +|++
T Consensus 109 ~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ 148 (406)
T KOG1479|consen 109 TDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSE 148 (406)
T ss_pred cCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHH
Confidence 1355666667778888888776666555554 4444
No 284
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=92.68 E-value=25 Score=41.11 Aligned_cols=142 Identities=11% Similarity=0.080 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhCCC---hhHHHHHHHHHHH-HHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH
Q 004673 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLG---TTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (738)
Q Consensus 9 lil~L~~~~~g~~~~~~~~~lp~L~~dfGlS---~s~iGLi~Sl~~~-g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~ 84 (738)
+-+++-.++..+..+.. -.+.+.+.++ +..+..+-+...+ .+.+..++.+++.+++.+.+++-+....+...
T Consensus 30 lpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~f 105 (509)
T COG3202 30 LPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGF 105 (509)
T ss_pred HHHHHHHHHHHHHHHHH----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 33444444444443333 4455555444 4566667676666 67778889999999999999998888888777
Q ss_pred HHHHHhh---------------h--------h---------HHHHHHHHHHHHHHHhhhhh-hHHHHHhhcCCcchhhhh
Q 004673 85 GLVMLWS---------------P--------N---------VYVLCIARLLDGFGVGLAVT-LVPLYISETAPSEIRGRL 131 (738)
Q Consensus 85 s~~~afa---------------~--------~---------~~~liI~r~l~G~g~G~~~~-~~~a~IaE~~P~k~Rg~~ 131 (738)
.+++++. . + .|...+.-++.=+=.....+ .-.....|.+..++-.|.
T Consensus 106 F~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRF 185 (509)
T COG3202 106 FALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRF 185 (509)
T ss_pred HHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhh
Confidence 7777752 1 1 12222222222222222223 446788899999999999
Q ss_pred chHhHHHhhhhhHhhHHHHHHHH
Q 004673 132 NTLPQFTGSGGMFLAYCMVFGMS 154 (738)
Q Consensus 132 ~~~~~~~~~~G~~I~~~~~~~l~ 154 (738)
.++++.+.+++..++..+.....
T Consensus 186 y~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 186 YPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998876665554
No 285
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.86 E-value=16 Score=42.54 Aligned_cols=130 Identities=12% Similarity=-0.021 Sum_probs=79.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhh----hh--------hhhh-h
Q 004673 558 ISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL----IS--------PVLK-A 624 (738)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~----~s--------~~~~-~ 624 (738)
..++..+++-.....=+.++..++-.+++++..|.++...........+++++....+.. .. ...+ .
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 445566666554443356667778888999999999887766666665555554433210 00 0000 0
Q ss_pred --h-------HHHHHHHHHHHHhhhh-cCcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHh
Q 004673 625 --G-------ISTACVIIYFCCFVAA-YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 687 (738)
Q Consensus 625 --~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~ 687 (738)
| ++.....+..=.++.. ..-..|....|+...++-.+-+++.+...+++..++..+..++.+.
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0 1111111111122221 1224567889999999999999999999999999999888887663
No 286
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=89.15 E-value=0.087 Score=61.77 Aligned_cols=131 Identities=10% Similarity=-0.045 Sum_probs=1.1
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhh------h---------
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLI------S--------- 619 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~------s--------- 619 (738)
++++++.+.+.+ ....-++.++..++..++..|..|-+.+-.+.++++++.+++++-...... .
T Consensus 32 RF~l~S~~~G~i-~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~ 110 (539)
T PF03137_consen 32 RFGLSSSQSGLI-SSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSIS 110 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccc
Confidence 577887555544 455778888888888899888777788888999999998887764322110 0
Q ss_pred ---h-------------------hhhhhHHHHHHHHHHHHhhhhc---CcchhhhhcccCcccchhhhhHHHHHhhhHHH
Q 004673 620 ---P-------------------VLKAGISTACVIIYFCCFVAAY---GPIPNILCAEIFPTKVRGICIAICAMAYWICD 674 (738)
Q Consensus 620 ---~-------------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~ 674 (738)
. .......++.+++..+..+++. .++..+|+=|.++++.-+..+|+..++..+|-
T Consensus 111 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGP 190 (539)
T PF03137_consen 111 SNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGP 190 (539)
T ss_dssp -----------------------------------------SSS------------------------------------
T ss_pred cccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccH
Confidence 0 0000111222222333333333 33455888899999999999999888888888
Q ss_pred HHHhhhHHHHHH
Q 004673 675 IIVTYTLPVMLS 686 (738)
Q Consensus 675 ~i~~~~~~~~~~ 686 (738)
++|-.+++.+++
T Consensus 191 a~Gf~lg~~~L~ 202 (539)
T PF03137_consen 191 ALGFLLGSFCLR 202 (539)
T ss_dssp ------------
T ss_pred HHHHHHHHHHHh
Confidence 887777776654
No 287
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=89.00 E-value=12 Score=44.43 Aligned_cols=153 Identities=15% Similarity=0.135 Sum_probs=88.1
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----------h--
Q 004673 557 GISSESASFLISAFTTFLMLPCIGVAMKLMD-VAGRRKLLLTTIPVLIVSLIILVISETLQLISPV-----------L-- 622 (738)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d-~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~-----------~-- 622 (738)
+.+...++-..+.+.+.. ....+++++++| .+||=+.+.++.++..++++++..........+. .
T Consensus 69 ~~~~~~aa~~v~~f~G~~-~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~ 147 (571)
T KOG1237|consen 69 HASGGGAANNVNAFGGTQ-FLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESP 147 (571)
T ss_pred ccchHHHHHHHHHHhhHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCc
Confidence 334444555555544333 335678999999 5689899999988888887777666554422110 0
Q ss_pred hhh-HHHHHHHHHHHH-hhhhcCcchhhhhcccCcc----cchh--hhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHH
Q 004673 623 KAG-ISTACVIIYFCC-FVAAYGPIPNILCAEIFPT----KVRG--ICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAF 694 (738)
Q Consensus 623 ~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p~----~~r~--~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~ 694 (738)
... ..+....++... ...+.-+....+-++-++. +.+. .-+.-.....++|.++...+..++-+..||..-|
T Consensus 148 s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf 227 (571)
T KOG1237|consen 148 SKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGF 227 (571)
T ss_pred chHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeec
Confidence 111 111112222222 1223334444677788872 2223 2233344455666666666666666778999889
Q ss_pred HHHHHHHHHHHHHHHH
Q 004673 695 GVYAVVCFISWVFVFL 710 (738)
Q Consensus 695 ~~~~~~~~~~~~~~~~ 710 (738)
.+..++.+++.++++.
T Consensus 228 ~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 228 GIPTVLNALAILIFLP 243 (571)
T ss_pred cHHHHHHHHHHHHHHc
Confidence 8888877777666554
No 288
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.02 E-value=5.2 Score=44.21 Aligned_cols=132 Identities=16% Similarity=0.062 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchh
Q 004673 49 MSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIR 128 (738)
Q Consensus 49 l~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~R 128 (738)
+-.+-..+..+.+..+.||+-.-.=..+..++.+.+.++.+++++.++-+++-.+..++.|..-.....+-+ .+|+.
T Consensus 70 aDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y~~~-- 146 (409)
T KOG3880|consen 70 ADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RYPSI-- 146 (409)
T ss_pred hhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-cCCCc--
Confidence 333445566677778888876544455566778888889999999999888888888888877554433333 33322
Q ss_pred hhhchHhHHHhhhhhHhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 129 GRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 129 g~~~~~~~~~~~~G~~I~~~~~~~l~l~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
...-...+...+.++|..--..+....+.+-|.++++...+.++.... +|++-++
T Consensus 147 --~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~-yf~lL~~ 201 (409)
T KOG3880|consen 147 --VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFA-YFFLLKS 201 (409)
T ss_pred --eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHH-HHheeCC
Confidence 112222222223333322111222224456788888877776654433 4444333
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=84.84 E-value=5.7 Score=35.53 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=52.1
Q ss_pred hhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHH
Q 004673 537 LYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 614 (738)
Q Consensus 537 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~ 614 (738)
.-.+|...++. ++|.++.+.+ .....++.++|.+.+.++.++..+++.+..+.++..++++.+.+...
T Consensus 12 TplLP~M~~~~---------~ls~~~ag~l-asaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 12 TPLLPLMQADG---------GLSLSQAGWL-ASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HhHhHHHHHhc---------CCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34556666664 4555555555 45678999999999999999988899999999999888888877543
No 290
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=83.67 E-value=1.7 Score=47.05 Aligned_cols=153 Identities=20% Similarity=0.177 Sum_probs=80.7
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh-----HHHHH
Q 004673 556 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAG-----ISTAC 630 (738)
Q Consensus 556 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~-----~~~~~ 630 (738)
+|+-..+.+.++....+-.+++|. +.|-|.||-|||+..+...+..+++++.= .+++.+.. +.-+.
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGt-ivgSLaDkqGRKracvtycitYiLsCiTK--------hSpqYkVLmVGR~LGGia 137 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGT-IVGSLADKQGRKRACVTYCITYILSCITK--------HSPQYKVLMVGRVLGGIA 137 (454)
T ss_pred cCccCCccceeeecccchHHHHHH-HHHHHHhhhccccceeeehHHHHHHHHhh--------cCCceEEEeehhhhhhHH
Confidence 455566777777666666677666 56789999999998776655555544321 11111110 00011
Q ss_pred HHHHHHHhhhhcCcchhhhhcccC-----cccchhhhhHHHH-HhhhHHHHHHhhhHHHHHHhhcc--hhHHHHHHHHHH
Q 004673 631 VIIYFCCFVAAYGPIPNILCAEIF-----PTKVRGICIAICA-MAYWICDIIVTYTLPVMLSSIGL--AGAFGVYAVVCF 702 (738)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~e~~-----p~~~r~~~~gi~~-~~~~i~~~i~~~~~~~~~~~~g~--~~~~~~~~~~~~ 702 (738)
..+.+..|-. -+++|-. |.+.....++=.. ..+.+-+++....+..+++.++. -.+|-..+.+..
T Consensus 138 TsLLFSaFEs-------WliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLa 210 (454)
T KOG4332|consen 138 TSLLFSAFES-------WLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLA 210 (454)
T ss_pred HHHHHHHHHH-------HHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Confidence 1111111111 2234543 4444333333332 33455666777777777777753 344544444444
Q ss_pred HHHHHHHHhccCCCCCChhhhH
Q 004673 703 ISWVFVFLRVPETKGMPLEVIT 724 (738)
Q Consensus 703 ~~~~~~~~~~~e~~~~~l~~~~ 724 (738)
++..+.+--.-|..|.+.|+.|
T Consensus 211 igmAvil~~W~ENygdps~~kd 232 (454)
T KOG4332|consen 211 IGMAVILSSWSENYGDPSENKD 232 (454)
T ss_pred HHHHHHHhhhhhccCChhhhHH
Confidence 5555544445688888776654
No 291
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=80.94 E-value=10 Score=43.23 Aligned_cols=181 Identities=17% Similarity=0.194 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHH--HHHHHHHhhh-----
Q 004673 515 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLP--CIGVAMKLMD----- 587 (738)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~d----- 587 (738)
++.+++.+++...|. .-+. ...-.|.+++.-+++. .+.+.. .+..-| --++...++|
T Consensus 30 ~~~illLl~LYllQG-iP~G-L~~~iP~lL~ak~vSy---------t~~a~f-----S~ay~P~sLKllWaPiVDs~y~k 93 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQG-IPLG-LIGAIPLLLQAKGVSY---------TSQAIF-----SFAYWPFSLKLLWAPIVDSVYSK 93 (510)
T ss_pred hhhHHHHHHHHHHcC-Cchh-HhhhhHHHhcCCCcch---------hhhhhh-----hhhhhHHHHHHHHHhhhHHHHHH
Confidence 355555555555443 3344 4447888888655431 111111 111111 1234455666
Q ss_pred ccchhHHHHHH-HHHHHHHHHHHHHHHHhhh-hh-hhhhhhHHHHHHHHHHHHhhhhcCcc-hhhhhcccCcccchhhhh
Q 004673 588 VAGRRKLLLTT-IPVLIVSLIILVISETLQL-IS-PVLKAGISTACVIIYFCCFVAAYGPI-PNILCAEIFPTKVRGICI 663 (738)
Q Consensus 588 ~~grr~~l~~~-~~~~~v~~~~~~~~~~~~~-~s-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~p~~~r~~~~ 663 (738)
|+||||..++- ..+.. +.++.++...+. .. +......++....++..-|.++..-+ .-.+.-.+..++..|-|.
T Consensus 94 ~~GrrksWvvp~q~llG--~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaS 171 (510)
T KOG3574|consen 94 RFGRRKSWVVPCQYLLG--LFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYAS 171 (510)
T ss_pred hhccccceeeehHHHHH--HHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchh
Confidence 99999988763 33333 333333333221 11 11112222222222233333333222 123333566666666665
Q ss_pred HHHHHhhhHHHHHHhhhHHHHHHh----------------hcchhHHHHHHHHHHHHHHHHHHhcc
Q 004673 664 AICAMAYWICDIIVTYTLPVMLSS----------------IGLAGAFGVYAVVCFISWVFVFLRVP 713 (738)
Q Consensus 664 gi~~~~~~i~~~i~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ 713 (738)
........+|.+++..++-.+.+. +...+..++++.+.+++-.++.+.-+
T Consensus 172 T~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kk 237 (510)
T KOG3574|consen 172 TCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKK 237 (510)
T ss_pred HHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 555555666666655544332220 12334455666666666555555433
No 292
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=79.50 E-value=9.5 Score=46.52 Aligned_cols=131 Identities=11% Similarity=-0.026 Sum_probs=82.6
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhh-------h------hh-
Q 004673 555 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL-------I------SP- 620 (738)
Q Consensus 555 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~-------~------s~- 620 (738)
++++++.. +.++....-++.++...+..+..-|.-|-+++-.+..+++++.+++++-..... . .+
T Consensus 126 RF~i~Ss~-sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~ 204 (735)
T KOG3626|consen 126 RFKISSSQ-SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPS 204 (735)
T ss_pred hcCCCCCc-ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCc
Confidence 68888765 555555567888888888888888888888888899999888887776422110 0 00
Q ss_pred ---------------------h----hhhhHHHHHHHHHHHHhhhhc---CcchhhhhcccCcccchhhhhHHHHHhhhH
Q 004673 621 ---------------------V----LKAGISTACVIIYFCCFVAAY---GPIPNILCAEIFPTKVRGICIAICAMAYWI 672 (738)
Q Consensus 621 ---------------------~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i 672 (738)
. ......++.+++.....+++- .++...|+-|...++.....+|+...+.-+
T Consensus 205 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~l 284 (735)
T KOG3626|consen 205 SSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAIL 284 (735)
T ss_pred cccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHh
Confidence 0 000011122222222233332 344557777888888778888888877777
Q ss_pred HHHHHhhhHHHHHH
Q 004673 673 CDIIVTYTLPVMLS 686 (738)
Q Consensus 673 ~~~i~~~~~~~~~~ 686 (738)
|=++|-.+++++++
T Consensus 285 GPaiGfllgS~~l~ 298 (735)
T KOG3626|consen 285 GPAIGFLLGSFCLK 298 (735)
T ss_pred hhHHHHHHHHHHHH
Confidence 77777777776654
No 293
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.75 E-value=16 Score=42.07 Aligned_cols=111 Identities=18% Similarity=0.103 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhCCh--HHHHHH--HHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHHH
Q 004673 42 VEGLVVAMSLIGATAITTCSGPISDWLGRR--PMLILS--SVLYFVSGLVMLWS---------PNVYVLCIARLLDGFGV 108 (738)
Q Consensus 42 ~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR--~~Llig--lvI~aI~s~~~afa---------~~~~~liI~r~l~G~g~ 108 (738)
..-.+..++.+|-.+|-.+..+. ..-++| .++..+ =+++.--.++|..- ++-+..++.-++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 33456677777777777654332 111223 332221 12233333333322 45566777899999999
Q ss_pred hhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHH
Q 004673 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (738)
Q Consensus 109 G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l 153 (738)
|-..+....+..+..++++|-.+..+...+..+|..+|.+.++..
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999886665443
No 294
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=74.98 E-value=1.1e+02 Score=34.79 Aligned_cols=115 Identities=17% Similarity=0.105 Sum_probs=69.2
Q ss_pred HHHHh-hCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHH-----HHHHHh----hhhHHHHHHH
Q 004673 31 YIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS-----GLVMLW----SPNVYVLCIA 100 (738)
Q Consensus 31 ~L~~d-fGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~-----s~~~af----a~~~~~liI~ 100 (738)
.+... .|-..-+.+++.+.|.+...+|+...-++.|.--.-+.+..-+++..++ .+-..| .++.+.++++
T Consensus 32 tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~l 111 (508)
T COG4262 32 TLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYAL 111 (508)
T ss_pred HHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHH
Confidence 34444 3556678899999999999999888877766433222222222222111 111123 3467888889
Q ss_pred HHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhH
Q 004673 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAY 147 (738)
Q Consensus 101 r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~ 147 (738)
-++.|+-.|.-.|..+.++..... +-.-..+..-..-.+|+..+.
T Consensus 112 t~vIG~LVG~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~g 156 (508)
T COG4262 112 TAVIGVLVGAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGG 156 (508)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHH
Confidence 999999999999999888876221 111222333333566666553
No 295
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=72.28 E-value=1.1e+02 Score=35.15 Aligned_cols=19 Identities=5% Similarity=-0.164 Sum_probs=11.2
Q ss_pred HhhhhhhhhhhHHHHHHhh
Q 004673 529 QFSGINGVLYYTPQILEQA 547 (738)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~ 547 (738)
.+.-+|.++.-.+++.+..
T Consensus 30 ~LlpWN~fiTa~~y~~~~~ 48 (406)
T KOG1479|consen 30 TLLPWNMFITASDYYYYRF 48 (406)
T ss_pred cccchHhhhccHHHHHhhc
Confidence 3445666666666666553
No 296
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=71.39 E-value=22 Score=39.69 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=55.3
Q ss_pred HHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCC
Q 004673 53 GATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAP 124 (738)
Q Consensus 53 g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P 124 (738)
..+..+.+.+.+..++|-|.+++++...+...-..- +-+.++.++-.-.+.|+|.+..+..--+|+++.-.
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 334455556689999999999999998887654322 34678999999999999999998888788777654
No 297
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=68.00 E-value=68 Score=35.21 Aligned_cols=31 Identities=6% Similarity=-0.154 Sum_probs=20.8
Q ss_pred hHHHHHhhhHHHHHHhhhHHHHHHhhcchhH
Q 004673 663 IAICAMAYWICDIIVTYTLPVMLSSIGLAGA 693 (738)
Q Consensus 663 ~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~ 693 (738)
.+..-+...+.+.++..+.+.+....||.+.
T Consensus 157 ~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~ 187 (296)
T COG1230 157 GAYLHVLGDALGSVGVIIAAIVIRFTGWSWL 187 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 3444556666666777777777777887764
No 298
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=58.69 E-value=2.9 Score=45.34 Aligned_cols=111 Identities=7% Similarity=0.020 Sum_probs=2.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHHHHHHHHHHHHhhh--hhh-hhhhhHHHHHHHHHHHHhhhhc-
Q 004673 568 SAFTTFLMLPCIGVAMKLMDVA-GRRKLLLTTIPVLIVSLIILVISETLQL--ISP-VLKAGISTACVIIYFCCFVAAY- 642 (738)
Q Consensus 568 ~~~~~~~~~~~~~~~~~l~d~~-grr~~l~~~~~~~~v~~~~~~~~~~~~~--~s~-~~~~~~~~~~~~~~~~~~~~~~- 642 (738)
.....++.++|+.+.++..-+. .+|++... .+.=.+...++......+. ..+ ........ +++++.+++.-||
T Consensus 188 fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~-s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~-~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 188 FLLFNLGDFIGRFLASWPRWPGPSPRWLWIL-SLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWF-IILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcchhcceeEecccccccHHHH-HHHHHHHHHHHHHHHhhcccccCCCcccchHHH-HHHHHHHHHccchh
Confidence 4457899999999888753221 34444432 2222222211111111100 000 00111111 2222222233333
Q ss_pred CcchhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhh
Q 004673 643 GPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYT 680 (738)
Q Consensus 643 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~ 680 (738)
......+.++..+++.|..+-.++..+-.+|-.+|..+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -HHHH---------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555777888888888888777777766666666554
No 299
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=57.62 E-value=1.1e+02 Score=34.11 Aligned_cols=18 Identities=28% Similarity=0.213 Sum_probs=10.4
Q ss_pred HHhhhhhHHHHHHHHHHH
Q 004673 510 LEAGVKRALLVGVGIQIL 527 (738)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~ 527 (738)
++.++...-++++.+.+.
T Consensus 127 L~~ry~~~~~~gv~i~i~ 144 (334)
T PF06027_consen 127 LKRRYSWFHILGVLICIA 144 (334)
T ss_pred HHhhhhHHHHHHHHHHHh
Confidence 344555666666666553
No 300
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=55.35 E-value=30 Score=34.32 Aligned_cols=89 Identities=11% Similarity=0.070 Sum_probs=50.3
Q ss_pred HhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhhHHHHHHHHHHHHhhhhcCcchhhhhcccCcccchhhh
Q 004673 584 KLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLIS-PVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGIC 662 (738)
Q Consensus 584 ~l~d~~grr~~l~~~~~~~~v~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 662 (738)
.++||+-||-.+..++... +++..++.++..-... .... ..+.++.-+++|+.+...+.|.+..-.-.++.-|..
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~-lG~~~f~~~y~l~~~~~~dvP---~~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTA-LGVAVFVVFYYLKSRQIVDVP---PWAVLLVSLVFFGLGLLGISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHHhccccccC---chHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCc
Confidence 4568888887777766544 3444444433332111 1111 122333344455555555666666666677778999
Q ss_pred hHHHHHhhhHHHHH
Q 004673 663 IAICAMAYWICDII 676 (738)
Q Consensus 663 ~gi~~~~~~i~~~i 676 (738)
.|+-.+-.+++-+.
T Consensus 132 lG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 132 LGWEEFKRNWGRMW 145 (153)
T ss_pred ccHHHHHHhHHHHH
Confidence 99888877776554
No 301
>PRK10263 DNA translocase FtsK; Provisional
Probab=52.97 E-value=1.1e+02 Score=40.12 Aligned_cols=28 Identities=7% Similarity=-0.027 Sum_probs=14.5
Q ss_pred HHHHHHhhhHHHHHHhhcchhHHHHHHH
Q 004673 672 ICDIIVTYTLPVMLSSIGLAGAFGVYAV 699 (738)
Q Consensus 672 i~~~i~~~~~~~~~~~~g~~~~~~~~~~ 699 (738)
.|++||..+...+...+|..++.+++.+
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLl 169 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLC 169 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3555665555555555554444443333
No 302
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=48.91 E-value=46 Score=37.15 Aligned_cols=137 Identities=16% Similarity=0.219 Sum_probs=87.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHH-HHHhhCCCh-hHHHHHHHHHHHHHHHHHHhHHHHHhhhCChH------HHHHHHHHHH
Q 004673 11 ATIGNFLQGWDNATIAGAIVY-IKKDLNLGT-TVEGLVVAMSLIGATAITTCSGPISDWLGRRP------MLILSSVLYF 82 (738)
Q Consensus 11 l~L~~~~~g~~~~~~~~~lp~-L~~dfGlS~-s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~------~LliglvI~a 82 (738)
+++.++..++..+.....+-+ -.+.+.++. .|.=|....|.+|-.+.. =+-++=+-+ ++-.-.+++.
T Consensus 256 L~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSR-----SS~~~~~~p~l~~LailQ~vNl~ff 330 (409)
T KOG3880|consen 256 LALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISR-----SSINLFTMPYLWLLAILQFVNLLFF 330 (409)
T ss_pred HHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEe-----ccceEEechHHHHHHHHHHHHHHHH
Confidence 444555555444433332211 134455543 446788888777643321 111111211 1122223344
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHH
Q 004673 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (738)
Q Consensus 83 I~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~ 152 (738)
+...+..+.++++..++.-+.-|+-.|..++-..--+.+-.++++|-.+++.....-++|..++..+...
T Consensus 331 ~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 331 LLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 4455556788999999999999998888888888888888888999999999999999999998665543
No 303
>PRK12438 hypothetical protein; Provisional
Probab=48.21 E-value=1.7e+02 Score=37.21 Aligned_cols=19 Identities=11% Similarity=-0.008 Sum_probs=12.9
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 004673 159 PSWRLMLGVLSIPALLYFA 177 (738)
Q Consensus 159 ~~Wr~~~~I~ail~~~~~~ 177 (738)
.+||.+....+++.+..++
T Consensus 281 r~~rlp~i~~~llv~~~iv 299 (991)
T PRK12438 281 RDLRIPAMAAALLVLSAIL 299 (991)
T ss_pred hcchhHHHHHHHHHHHHHH
Confidence 4899988777776554433
No 304
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=48.08 E-value=4.2e+02 Score=29.23 Aligned_cols=82 Identities=16% Similarity=0.209 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhh---hCChHHHHHHH
Q 004673 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW---LGRRPMLILSS 78 (738)
Q Consensus 2 ~~~~lillil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDR---fGRR~~Lligl 78 (738)
+|+.+..+.+.+++++.-...+.....+.-+.+..+...+..+++.++..+.. ..+-.++ ||.||.=+++.
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa 94 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAA 94 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHH
Confidence 45566666666777666666666666666777878877776766665543322 1222222 77777766666
Q ss_pred HHHHHHHHHHH
Q 004673 79 VLYFVSGLVML 89 (738)
Q Consensus 79 vI~aI~s~~~a 89 (738)
++.++..+..+
T Consensus 95 ~~nav~Li~~s 105 (296)
T COG1230 95 FLNALLLIVVS 105 (296)
T ss_pred HHHHHHHHHHH
Confidence 66555544444
No 305
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=47.17 E-value=1.3e+02 Score=33.24 Aligned_cols=13 Identities=15% Similarity=-0.207 Sum_probs=5.8
Q ss_pred HHHHHHHHhhhcc
Q 004673 577 PCIGVAMKLMDVA 589 (738)
Q Consensus 577 ~~~~~~~~l~d~~ 589 (738)
+..++.|++.-|.
T Consensus 10 ~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 10 FLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHh
Confidence 3334444555443
No 306
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=44.05 E-value=2e+02 Score=33.88 Aligned_cols=25 Identities=8% Similarity=0.056 Sum_probs=13.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhh
Q 004673 506 WAALLEAGVKRALLVGVGIQILQQFS 531 (738)
Q Consensus 506 ~~~l~~~~~~~~~~~~~~~~~~~~~~ 531 (738)
-.++|+++. .+.+++.++....|+.
T Consensus 251 hgDVFR~P~-~~~lls~lvG~G~Qll 275 (521)
T PF02990_consen 251 HGDVFRPPK-HPMLLSALVGTGIQLL 275 (521)
T ss_pred hHHHhcCcC-CchHHHhHhcchhhhh
Confidence 345565543 4555555555555554
No 307
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=43.07 E-value=9.5 Score=41.36 Aligned_cols=107 Identities=21% Similarity=0.141 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhh-hCChHHHHHHH--HHHHHHHHHHH----------hhhhHHHHHHHHHHHHHHHhhh
Q 004673 45 LVVAMSLIGATAITTCSGPISDW-LGRRPMLILSS--VLYFVSGLVML----------WSPNVYVLCIARLLDGFGVGLA 111 (738)
Q Consensus 45 Li~Sl~~~g~a~~~~~~G~LsDR-fGRR~~Lligl--vI~aI~s~~~a----------fa~~~~~liI~r~l~G~g~G~~ 111 (738)
.+..+|.+|-.+|..+.++.-=+ ..+|.++..+. +++.-..++|. +-+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667888888888877764211 12444333211 12222222221 2235567777889999999999
Q ss_pred hhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHH
Q 004673 112 VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (738)
Q Consensus 112 ~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~ 151 (738)
.+....+..+..++++|..+..+..++..+|..+|..+.+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -HHHH-----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988888888888855543
No 308
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=42.45 E-value=5.1e+02 Score=32.01 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc
Q 004673 565 FLISAFTTFLMLPCIGVAMKLMDVA 589 (738)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~l~d~~ 589 (738)
++.+.+..+..+...++...+.|++
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4445666777788888888999975
No 309
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=42.11 E-value=8.4 Score=41.61 Aligned_cols=14 Identities=21% Similarity=0.097 Sum_probs=0.0
Q ss_pred ccchhHHHHHHHHH
Q 004673 588 VAGRRKLLLTTIPV 601 (738)
Q Consensus 588 ~~grr~~l~~~~~~ 601 (738)
-|.||-+.-.+..+
T Consensus 71 lF~RrLLCPLGlLC 84 (381)
T PF05297_consen 71 LFKRRLLCPLGLLC 84 (381)
T ss_dssp --------------
T ss_pred HHHHhhcCcchHHH
Confidence 46777655444433
No 310
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=40.00 E-value=3.2e+02 Score=25.56 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHH
Q 004673 574 LMLPCIGVAMKLMD-VAGRRKLLLTTIPVLIVSLIIL 609 (738)
Q Consensus 574 ~~~~~~~~~~~l~d-~~grr~~l~~~~~~~~v~~~~~ 609 (738)
..+++.+++|+++- |.++|..+........-.++++
T Consensus 46 i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~ 82 (116)
T PF12670_consen 46 IYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 33344445555544 4556665555444433333333
No 311
>COG3619 Predicted membrane protein [Function unknown]
Probab=39.15 E-value=4.9e+02 Score=27.54 Aligned_cols=66 Identities=15% Similarity=0.248 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH--------HHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCC
Q 004673 5 ALVAIAATIGNFLQGWDNATIAGAIV--------YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR 70 (738)
Q Consensus 5 ~lillil~L~~~~~g~~~~~~~~~lp--------~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGR 70 (738)
.+.++++..+.+.+.+.....+.... .+.-++.-.+...........+..++|......+..|..|
T Consensus 11 ~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 11 RLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45556666777777776633322211 1222232235555566677777777776655555555554
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.12 E-value=1.1e+02 Score=28.84 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhhh-CChHHHHHHHHHHH
Q 004673 44 GLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYF 82 (738)
Q Consensus 44 GLi~Sl~~~g~a~~~~~~G~LsDRf-GRR~~LliglvI~a 82 (738)
+.-.++=+++..+.....||+.||| |.++..++..++.+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3445666777777778889999987 67776665544433
No 313
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=35.13 E-value=2.6e+02 Score=29.88 Aligned_cols=107 Identities=14% Similarity=0.202 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHH--HhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHH
Q 004673 78 SVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLY--ISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL 155 (738)
Q Consensus 78 lvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~--IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l 155 (738)
.+.+.+|.+++..++....=.++.-..|+..|........+ +....| +|.....+...++++|..+-.....-...
T Consensus 14 ~~~~v~Gi~Lf~~A~~LS~s~~FyY~sg~~lGv~~s~li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~~~~nl~~ 91 (249)
T PF10225_consen 14 VAQFVLGIVLFFLAPSLSRSVLFYYSSGISLGVLASLLILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQLWENLQS 91 (249)
T ss_pred HHHHHHHHHHHHHhHHhccChhHHHhhhHHHHHHHHHHHHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHHHHHHHHH
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcccCC
Q 004673 156 LASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (738)
Q Consensus 156 ~~~~~Wr~~~~I~ail~~~~~~~i~~flpES 186 (738)
+-..-|.++++...+.+++.+.++...-|..
T Consensus 92 il~~~~~~v~~yv~~~G~vsf~vcy~~gp~~ 122 (249)
T PF10225_consen 92 ILEEYRIYVLGYVLVVGLVSFAVCYRYGPPV 122 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCc
No 314
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.36 E-value=71 Score=30.05 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=28.7
Q ss_pred ccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhc
Q 004673 656 TKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 689 (738)
Q Consensus 656 ~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g 689 (738)
++.++.+.++-...-.+++++.....|++++.+-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4457788888888899999999999999999874
No 315
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=30.98 E-value=5.5e+02 Score=31.67 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=20.6
Q ss_pred HHHHhhhcc----chhHHHHHHHHHHHHHHHHHHHHH
Q 004673 581 VAMKLMDVA----GRRKLLLTTIPVLIVSLIILVISE 613 (738)
Q Consensus 581 ~~~~l~d~~----grr~~l~~~~~~~~v~~~~~~~~~ 613 (738)
+++-+.|.- ||.+-++++..+.+++.+...+..
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~ 78 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF 78 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455677743 566777777777766666655433
No 316
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=30.44 E-value=3.6e+02 Score=31.30 Aligned_cols=118 Identities=19% Similarity=0.292 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhhccchhHH-----HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcc
Q 004673 571 TTFLMLPCIGVAMKLMDVAGRRKL-----LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPI 645 (738)
Q Consensus 571 ~~~~~~~~~~~~~~l~d~~grr~~-----l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (738)
+++..+.-++++-++.+.+.++++ +++|+.+...-++++.+++... +...|.+...++...+
T Consensus 300 YgiLFI~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~-------------F~~AYliAa~a~i~Li 366 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIG-------------FNLAYLIAALACIGLI 366 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhc-------------hHHHHHHHHHHHHHHH
Q ss_pred hhhhhcccCcccchhhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 004673 646 PNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVF 709 (738)
Q Consensus 646 ~~~~~~e~~p~~~r~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 709 (738)
. .|+.-++..+.|+..++...++-...-.+ ++..-.++...+-...+++++.+..+
T Consensus 367 ~-~Y~~~vl~~~k~~~~~~~~L~~LY~~Ly~-------lLq~EdyALL~GSl~LF~iLa~vM~~ 422 (430)
T PF06123_consen 367 S-LYLSSVLKSWKRGLIFAGLLAALYGFLYV-------LLQSEDYALLMGSLLLFIILALVMYL 422 (430)
T ss_pred H-HHHHHHHhcchHHHHHHHHHHHHHHHHHH-------HHHhhhHHHHHHHHHHHHHHHHHHhe
No 317
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=29.81 E-value=6e+02 Score=25.71 Aligned_cols=43 Identities=16% Similarity=0.075 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHhHHHHH---hhhCChHHHHHHHHHHHHHHHH
Q 004673 45 LVVAMSLIGATAITTCSGPIS---DWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 45 Li~Sl~~~g~a~~~~~~G~Ls---DRfGRR~~LliglvI~aI~s~~ 87 (738)
+......+++.+|..+++.+. ++..+|+.....+.+-++..++
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~ 95 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLI 95 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 334445556666666666662 3344444444444443333333
No 318
>PRK11715 inner membrane protein; Provisional
Probab=29.47 E-value=3.5e+02 Score=31.40 Aligned_cols=74 Identities=19% Similarity=0.305 Sum_probs=39.2
Q ss_pred HHHHHHhhhccchhH-----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhhhhcCcchhhhhccc
Q 004673 579 IGVAMKLMDVAGRRK-----LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEI 653 (738)
Q Consensus 579 ~~~~~~l~d~~grr~-----~l~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 653 (738)
++++-++.+...+++ .+++|+.+...-++++.+++... +...|.....++...+. .|..-+
T Consensus 314 TF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEHig-------------F~~AYliAa~a~v~li~-~Y~~~v 379 (436)
T PRK11715 314 TFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEHIG-------------FTLAYLIAALACVLLIG-FYLSAV 379 (436)
T ss_pred HHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhhhc-------------hHHHHHHHHHHHHHHHH-HHHHHH
Confidence 334446667666554 46677777777777777776544 12222222222222222 455556
Q ss_pred CcccchhhhhHHH
Q 004673 654 FPTKVRGICIAIC 666 (738)
Q Consensus 654 ~p~~~r~~~~gi~ 666 (738)
+....||..++.+
T Consensus 380 l~~~k~g~~~~~~ 392 (436)
T PRK11715 380 LRSWKRGLLFAAA 392 (436)
T ss_pred HhcchHHHHHHHH
Confidence 6666676665543
No 319
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=29.29 E-value=1.7e+02 Score=29.22 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=51.8
Q ss_pred HHHhhhCChHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhc
Q 004673 63 PISDWLGRRPMLILSSVLYFVSGLVMLW----------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLN 132 (738)
Q Consensus 63 ~LsDRfGRR~~LliglvI~aI~s~~~af----------a~~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~ 132 (738)
.++||.-||..+..|.-......++..+ .+++..+++.-++.|+|.- .+.|..++-..++++.|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcc
Confidence 4678888877776665433222222221 2566667666666666532 44566777788888889999
Q ss_pred hHhHHHhhhhhHhh
Q 004673 133 TLPQFTGSGGMFLA 146 (738)
Q Consensus 133 ~~~~~~~~~G~~I~ 146 (738)
|+-.+--+++-+.-
T Consensus 133 G~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 133 GWEEFKRNWGRMWE 146 (153)
T ss_pred cHHHHHHhHHHHHH
Confidence 99888877776653
No 320
>PF03699 UPF0182: Uncharacterised protein family (UPF0182); InterPro: IPR005372 This family contains uncharacterised integral membrane proteins.; GO: 0016021 integral to membrane
Probab=28.88 E-value=7.1e+02 Score=31.14 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=13.6
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 004673 159 PSWRLMLGVLSIPALLYFAF 178 (738)
Q Consensus 159 ~~Wr~~~~I~ail~~~~~~~ 178 (738)
.+||.+....+++.++.+++
T Consensus 269 ~~~~~~~~~~~~~~v~~i~~ 288 (774)
T PF03699_consen 269 RNWRLPAIGLGLLVVSSILL 288 (774)
T ss_pred cccHHHHHHHHHHHHHHHHH
Confidence 48998887777766654433
No 321
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=27.67 E-value=3.5e+02 Score=31.56 Aligned_cols=126 Identities=13% Similarity=0.117 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHH
Q 004673 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (738)
Q Consensus 7 illil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~ 86 (738)
-.+.+.+-+++..+...+..|.+ +..+++++.++...+.+.-.+.+.+++++--....++|-|-....+.....++-+
T Consensus 17 ~~~~lglQH~lamfg~~V~VPli--vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~ 94 (451)
T COG2233 17 KLLLLGLQHLLAMFGATVLVPLL--VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPM 94 (451)
T ss_pred HHHHHHHHHHHHHHhcchHhhHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHH
Confidence 34456666666666655554433 5578999999999999999999999999887644456656666666666666655
Q ss_pred HHHhhh---hHHHHHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchH
Q 004673 87 VMLWSP---NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTL 134 (738)
Q Consensus 87 ~~afa~---~~~~liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~ 134 (738)
+..... ....++-+-+..|+-.-..-+.....+...+||---|....+
T Consensus 95 i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~ 145 (451)
T COG2233 95 IAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLV 145 (451)
T ss_pred HHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeee
Confidence 555432 355666566666665444433322288889998876665544
No 322
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=27.19 E-value=1e+03 Score=29.45 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=19.0
Q ss_pred HHHHhhhc----cchhHHHHHHHHHHHHHHHHHHHH
Q 004673 581 VAMKLMDV----AGRRKLLLTTIPVLIVSLIILVIS 612 (738)
Q Consensus 581 ~~~~l~d~----~grr~~l~~~~~~~~v~~~~~~~~ 612 (738)
+++-++|. -||.+-++++.++..++.+...+.
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll 77 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELL 77 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567774 356666777766666665554443
No 323
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=26.92 E-value=5e+02 Score=28.23 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhh-hCChHHHH----HHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHHHHHhhhhh
Q 004673 44 GLVVAMSLIGATAITTCSGPISDW-LGRRPMLI----LSSVLYFVSGLVMLW-S----PNVYVLCIARLLDGFGVGLAVT 113 (738)
Q Consensus 44 GLi~Sl~~~g~a~~~~~~G~LsDR-fGRR~~Ll----iglvI~aI~s~~~af-a----~~~~~liI~r~l~G~g~G~~~~ 113 (738)
.....++..|+.+|.+..|..... +-||+.+. ++++++.++.++... . .++..+++.-|+.|+..=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 445556666677777777777653 44565444 334444554444212 1 2456777888888876544444
Q ss_pred hHHHHHhhcCCcchhhhhchHhHHHhhhhhHhh
Q 004673 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (738)
Q Consensus 114 ~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~ 146 (738)
+. ..+..-++...+-+....+...+.+|.++-
T Consensus 224 Vi-L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 224 VI-LNLPHEYKGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HH-hcChhhhcCCCcceehhHHHHHHHHHHHHH
Confidence 33 333333333344455555556666666553
No 324
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=26.87 E-value=8.8e+02 Score=29.02 Aligned_cols=52 Identities=17% Similarity=0.216 Sum_probs=42.6
Q ss_pred HHHHH-HHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHh
Q 004673 94 VYVLC-IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL 145 (738)
Q Consensus 94 ~~~li-I~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I 145 (738)
|..++ +.-++.-+..-..+++..++=+.+.+|..=|..|+++++..++|.--
T Consensus 404 Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtW 456 (544)
T PF13000_consen 404 YFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTW 456 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCc
Confidence 44443 44778888888888999999999999999999999999998888633
No 325
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.25 E-value=4.5e+02 Score=30.85 Aligned_cols=16 Identities=0% Similarity=-0.184 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHhhhc
Q 004673 573 FLMLPCIGVAMKLMDV 588 (738)
Q Consensus 573 ~~~~~~~~~~~~l~d~ 588 (738)
+.....+++.|+.+.-
T Consensus 334 ~vYAlTs~i~GY~~gs 349 (593)
T KOG1277|consen 334 VVYALTSPINGYVSGS 349 (593)
T ss_pred HHHHhcccccccccce
Confidence 4445566777777653
No 326
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=25.83 E-value=1e+03 Score=27.09 Aligned_cols=121 Identities=15% Similarity=0.116 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 004673 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (738)
Q Consensus 8 llil~L~~~~~g~~~~~~~~~lp~L~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~ 87 (738)
.+.+.+-+.+..+...+..|.+ +.... +++++...+.+...+..++++++-+....+. -|-....|.....++..+
T Consensus 7 ~~~lglQh~l~~~~~~i~~p~i--v~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~ 82 (415)
T TIGR00801 7 TLVLGLQHLLAMFGGTVLVPLL--VGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMI 82 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--Hhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHH
Confidence 3344555555444443333322 44556 8999999999999999999999998876544 112222222211122222
Q ss_pred -HHhhhhHHHHHHHHHHHHHHHhhhhh----hHHHHHhhcCCcchhhhhc
Q 004673 88 -MLWSPNVYVLCIARLLDGFGVGLAVT----LVPLYISETAPSEIRGRLN 132 (738)
Q Consensus 88 -~afa~~~~~liI~r~l~G~g~G~~~~----~~~a~IaE~~P~k~Rg~~~ 132 (738)
.....++.....+-++.|+-...... ....++.+.+|+.-.+...
T Consensus 83 ~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 83 AIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhH
Confidence 22222344444444555544433322 1234567888888665533
No 327
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=24.08 E-value=4.7e+02 Score=28.31 Aligned_cols=56 Identities=20% Similarity=0.221 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhcCCcchhhhhchHhHHHhhhhhHhhHHHHHHHHH
Q 004673 97 LCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL 155 (738)
Q Consensus 97 liI~r~l~G~g~G~~~~~~~a~IaE~~P~k~Rg~~~~~~~~~~~~G~~I~~~~~~~l~l 155 (738)
.-..|.+.|+-.=.+ .+++++++-.||++ .....+--...++|..++.++..+..+
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~~--~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPRK--HDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccCc--CCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567799998876444 66789999999954 345666667777777777666655543
No 328
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=23.31 E-value=2e+02 Score=32.84 Aligned_cols=96 Identities=19% Similarity=0.187 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhCChH--HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHHHHH
Q 004673 42 VEGLVVAMSLIGATAITTCSGPISDWLGRRP--MLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYI 119 (738)
Q Consensus 42 ~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~--~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G~~~~~~~a~I 119 (738)
.-|..-++..+..+++.+..|.+--.+.|.. ++.++.+.-+...++++.+.++|..+++-++.+.--....+.+..-+
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 3455666777778888899999987777653 44445555555566666788999998888888877778888888888
Q ss_pred hhcCCcchhhhhchHhHH
Q 004673 120 SETAPSEIRGRLNTLPQF 137 (738)
Q Consensus 120 aE~~P~k~Rg~~~~~~~~ 137 (738)
++-...+.-|...|+..+
T Consensus 352 A~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHhhhhhhheeeeehHHH
Confidence 888888877888777554
No 329
>COG4769 Predicted membrane protein [Function unknown]
Probab=23.17 E-value=1.8e+02 Score=29.48 Aligned_cols=51 Identities=14% Similarity=0.027 Sum_probs=35.0
Q ss_pred HHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 004673 53 GATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVG 109 (738)
Q Consensus 53 g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~afa~~~~~liI~r~l~G~g~G 109 (738)
..++.+...=++..++|+|..-.+|... +-+|.+|+.+|++.+++.|-..-
T Consensus 85 aG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~~v 135 (181)
T COG4769 85 AGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTTSV 135 (181)
T ss_pred HHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcchH
Confidence 3444445555677889988875555433 34578999999999999875433
No 330
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=22.65 E-value=1.1e+03 Score=26.48 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=60.6
Q ss_pred HHHH-HHhhCCChhHHHHHHHHHHHHHHHHHHhHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHH
Q 004673 29 IVYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-SPNVYVLCIARLLDGF 106 (738)
Q Consensus 29 lp~L-~~dfGlS~s~iGLi~Sl~~~g~a~~~~~~G~LsDRfGRR~~LliglvI~aI~s~~~af-a~~~~~liI~r~l~G~ 106 (738)
.|.+ .+..|++.++...+.+...+..++++++-.+-.-++|.|..+..+.....++.....- ...+...+.+-++.|+
T Consensus 15 ~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gi 94 (406)
T TIGR03173 15 VPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGL 94 (406)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 3443 4456999988888888888999988887753333577777666665554444333322 2344444445555555
Q ss_pred HHhhhhhhHHHHHhhcCCcchhh
Q 004673 107 GVGLAVTLVPLYISETAPSEIRG 129 (738)
Q Consensus 107 g~G~~~~~~~a~IaE~~P~k~Rg 129 (738)
-.-... .....+.+.+|+.-.|
T Consensus 95 i~illg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 95 FVILLA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HHHHHH-HHHHHHHHHCCcHHHH
Confidence 443332 3455677888875443
No 331
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=21.67 E-value=5e+02 Score=26.67 Aligned_cols=22 Identities=18% Similarity=0.227 Sum_probs=12.7
Q ss_pred CcccchhhhhHHHHHhhhHHHH
Q 004673 654 FPTKVRGICIAICAMAYWICDI 675 (738)
Q Consensus 654 ~p~~~r~~~~gi~~~~~~i~~~ 675 (738)
-|.+.+.+++++.-.+..+-.+
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti 131 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITI 131 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHH
Confidence 4566667777775554444333
No 332
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.59 E-value=7.2e+02 Score=32.96 Aligned_cols=19 Identities=11% Similarity=0.025 Sum_probs=8.3
Q ss_pred HHHHHHHHHhHHHHHhhhC
Q 004673 51 LIGATAITTCSGPISDWLG 69 (738)
Q Consensus 51 ~~g~a~~~~~~G~LsDRfG 69 (738)
..+..+|..+...+..-||
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3334444444444444444
No 333
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=20.70 E-value=1.1e+03 Score=25.62 Aligned_cols=53 Identities=19% Similarity=0.054 Sum_probs=32.8
Q ss_pred hhhhHHHHHhhhHHHHHHhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004673 660 GICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMP 719 (738)
Q Consensus 660 ~~~~gi~~~~~~i~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 719 (738)
+...|++....+++.++. ....|....|.+-=.-.+++.+.-.++++|.|++.
T Consensus 198 nil~G~~w~ignl~~~is-------~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 198 NILTGLIWGIGNLFYLIS-------AQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred hhHHHHHHHHHHHHHHHh-------HHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 444455444444444333 23567777777766666777777788889988753
No 334
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=20.29 E-value=2.2e+03 Score=28.98 Aligned_cols=18 Identities=28% Similarity=0.443 Sum_probs=12.1
Q ss_pred chhHHHHHHHHHHHHHHH
Q 004673 159 PSWRLMLGVLSIPALLYF 176 (738)
Q Consensus 159 ~~Wr~~~~I~ail~~~~~ 176 (738)
.+|+..+++.+++.++.+
T Consensus 195 ~sw~Lalv~l~~~pl~~~ 212 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYI 212 (1466)
T ss_pred HhHHHHHHHHHHHHHHHH
Confidence 389988877766555433
Done!