Query 004674
Match_columns 738
No_of_seqs 417 out of 3013
Neff 8.7
Searched_HMMs 29240
Date Tue Mar 26 18:39:54 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004674.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1971-1975//hhsearch_pdb/004674hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m7h_A Putidacin L1; monocot m 1.0 1 1 340.0 14.5 231 41-306 10-253 (276)
2 4aoj_A High affinity nerve gro 1.0 1 1 339.8 18.6 207 517-726 41-266 (329)
3 4asz_A BDNF/NT-3 growth factor 1.0 1 1 339.7 15.7 207 517-726 13-236 (299)
4 4gt4_A Tyrosine-protein kinase 1.0 1 1 338.3 15.7 206 518-726 27-253 (308)
5 4fie_A Serine/threonine-protei 1.0 1 1 337.1 19.9 201 516-725 150-351 (423)
6 4b9d_A Serine/threonine-protei 1.0 1 1 336.4 16.0 204 516-725 23-229 (350)
7 4fih_A Serine/threonine-protei 1.0 1 1 336.2 17.9 200 517-725 74-274 (346)
8 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 335.0 15.6 204 517-726 32-239 (311)
9 3omv_A RAF proto-oncogene seri 1.0 1 1 330.6 19.0 202 516-725 35-241 (307)
10 4g3f_A NF-kappa-beta-inducing 1.0 1 1 327.0 15.6 201 516-727 57-262 (336)
No 1
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=1.00 E-value=1 Score=340.04 Aligned_cols=231 Identities=17% Similarity=0.218 Sum_probs=179.4
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCC----CCCEEEEEC
Q ss_conf 1122465578984579996960899389976458999861587865426898089963599987569----860899431
Q 004674 41 AARTLDTISLGQSIKDGETLVSAKESFELGFFSPGNSKSRYLGIWYKKIAEGTVTWVANRDAPLSDR----SGVLRINGE 116 (738)
Q Consensus 41 ~~~~~~~~~~~~~l~~~~~l~s~~g~f~~gf~~~~~~~~~ylgiw~~~~~~~t~vW~Anr~~p~~~~----~~~l~~~~~ 116 (738)
++++.|+|++|++|+++++|+|++|.|+||||+++ ++|+ |+ +++ +||+||||+|+.++ +++|+|+
T Consensus 10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~-- 78 (276)
T 3m7h_A 10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLA-- 78 (276)
T ss_dssp CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSE--
T ss_pred CCCCCCEECCCCEECCCCEEECCCCCEEEEEECCC---CEEE---EC--CCC-EEEECCCCCCCCCCCCCCCEEEEEE--
T ss_conf 34447874699876699989809995899997899---7699---87--997-2998988877677555653289995--
Q ss_pred CCCEEEE--ECCCCCEEEEECCCCC-----CCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEC
Q ss_conf 7814999--7799976998448888-----77536999059868994398999986045314689777689992321323
Q 004674 117 RNGILVL--LNSTNDTVWSSNSSIS-----AQKPVAALMESGNLVVKDGKDNNPDNILWQSFDYPCDTLLPGMKLGINLG 189 (738)
Q Consensus 117 ~~g~lvl--~~~~~~~~Ws~~~~~~-----~~~~~a~l~d~GNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgq~l~~~~~ 189 (738)
.||+||| .|+++.++|+|+++.. ..+.+|+|+|+|||||++ +.++||| |||||+|||||||.+.+
T Consensus 79 ~~G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~------~~~lWqS--~ptdtlLpg~~~~~~l~ 150 (276)
T 3m7h_A 79 FYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD------SLALWNG--TPAIPLVPGAIDSLLLA 150 (276)
T ss_dssp EEESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE------EEEEEES--CTTSCCCCSCTTCEEEC
T ss_pred CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECC------CCEEECC--CCCCCCCCCCCCCCCCC
T ss_conf 798699987579997899847876545556786699994899989548------9521175--43314024541121112
Q ss_pred CCCCEEEEEECCCCCCCCCCEEEECCCCCCCEEEEEE-CCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCC-EEEE
Q ss_conf 8973389980249999997527501899975679940-8848997199897531265554557705899962785-0289
Q 004674 190 TGLNRFLSSWKSTDDPARGDFTYGLDPRGIPQLVLRK-NSIITFRAGSWNGLHWTGVPQLQLNPVYTFEYVSNEK-EAFY 267 (738)
Q Consensus 190 ~~~~~~l~s~~s~~dps~G~~~~~~~~~g~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 267 (738)
+|.. | ++.+||++|.|+++++++|.. ++++ +..+||++|.|++.. ..+.......+.+.++++ ....
T Consensus 151 ~g~~--L---~S~~dps~G~fsl~l~~dGnl--vLy~~~~~~yW~Sgt~~~~~----~~l~l~~dGnLvl~d~~~~~vWs 219 (276)
T 3m7h_A 151 PGSE--L---VQGVVYGAGASKLVFQGDGNL--VAYGPNGAATWNAGTQGKGA----VRAVFQGDGNLVVYGAGNAVLWH 219 (276)
T ss_dssp SSEE--E---CTTCEEEETTEEEEECTTSCE--EEECTTSSEEEECCCTTTTC----CEEEECTTSCEEEECTTSCEEEE
T ss_pred CCCC--C---CCCCCCCCCEEEEEECCCCEE--EEEECCCEEEEECCCCCCCC----EEEEECCCCEEEEEECCCCEEEE
T ss_conf 5863--2---248988895278856588259--99959996999888989844----89999588769999599968998
Q ss_pred EEECCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEEEE
Q ss_conf 964289994215999225737899985288406999843
Q 004674 268 TYNLSNSSVPSRMVINPAGTVQRYTWMERTKTWTLFSRF 306 (738)
Q Consensus 268 ~~~~~~~~~~~r~~l~~~G~l~~y~w~~~~~~W~~~~~~ 306 (738)
++. .....+|++|+.||++++|.| ...|..++..
T Consensus 220 S~t--~~~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~ 253 (276)
T 3m7h_A 220 SHT--GGHASAVLRLQANGSIAILDE---KPVWARFGFQ 253 (276)
T ss_dssp CSC--TTCTTCEEEECTTSCEEEEEE---EEEEESSSCC
T ss_pred ECC--CCCCCEEEEECCCCCEEEECC---CCEEECCCCC
T ss_conf 317--998888999968942999838---8867725745
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=339.79 Aligned_cols=207 Identities=29% Similarity=0.478 Sum_probs=181.8
Q ss_pred CCCCCCCEECCCCCEEEEEEEEC------CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEE
Q ss_conf 79895651055564769974504------663899998158997566889999999967127772358847741782169
Q 004674 517 DNFSEKNKLGEGGFGPVYKGMLI------EGQEIAVKRLSKGSGQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERML 590 (738)
Q Consensus 517 ~~y~~~~~IG~G~fG~Vykg~~~------~g~~VavK~l~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~l 590 (738)
+++.+.++||+|+||.||+|.+. .+..||||+++.......++|.+|++++++++|||||+++|+|.+....+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 99288779714778489989987866577896999999775797999999999999985899899969899998998999
Q ss_pred EEEECCCCCHHHHHHHCC------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCE
Q ss_conf 984179999457886138------------88889999999999999999999873999974747989996898489953
Q 004674 591 IYEYLPNKSLDYFIFDTT------------RSKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTMNP 658 (738)
Q Consensus 591 V~E~~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~v 658 (738)
||||+++|+|.+++.... ...++++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC---EECCCCCHHHEEECCCCCE
T ss_conf 9982799939999986075410012211245788999999999999999999984088---4226666764898899968
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCC
Q ss_conf 9995247511498865545333346667455011037988904589999999999993-9989999998
Q 004674 659 KISDFGLARSFGLDQTEANTKRVVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIIC-GKKNRGFNHA 726 (738)
Q Consensus 659 kL~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDVwSlGviL~ellt-G~~p~~~~~~ 726 (738)
||+|||+++...............||+.|||||++.+..++.++||||||++||||+| |+.||.....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~ 266 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred EECCCCCCEECCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCH
T ss_conf 976660333656787530047645565665826544799996630010578999998289999999899
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=339.70 Aligned_cols=207 Identities=31% Similarity=0.497 Sum_probs=181.9
Q ss_pred CCCCCCCEECCCCCEEEEEEEEC------CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEE
Q ss_conf 79895651055564769974504------663899998158997566889999999967127772358847741782169
Q 004674 517 DNFSEKNKLGEGGFGPVYKGMLI------EGQEIAVKRLSKGSGQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERML 590 (738)
Q Consensus 517 ~~y~~~~~IG~G~fG~Vykg~~~------~g~~VavK~l~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~l 590 (738)
++|.+.+.||+|+||.||+|.+. .+..||||+++.......++|.+|++++++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 89298249820788299999987766677887999999677785899999999999985899888628799956998999
Q ss_pred EEEECCCCCHHHHHHHCC----------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEE
Q ss_conf 984179999457886138----------8888999999999999999999987399997474798999689848995399
Q 004674 591 IYEYLPNKSLDYFIFDTT----------RSKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTMNPKI 660 (738)
Q Consensus 591 V~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~vkL 660 (738)
||||+++|+|.+++.... ....+++.++..++.|++.||+|||+++ |+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEE
T ss_conf 99858999689999860864211123577788999999999999999999997599---046765776389879986898
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCC
Q ss_conf 95247511498865545333346667455011037988904589999999999993-9989999998
Q 004674 661 SDFGLARSFGLDQTEANTKRVVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIIC-GKKNRGFNHA 726 (738)
Q Consensus 661 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDVwSlGviL~ellt-G~~p~~~~~~ 726 (738)
+|||+|+...............||+.|||||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~ 236 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred CCCCCCEECCCCCCEEECCCEECCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 8730010067887416647513470103889870799970366778899999998089999999899
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=1.00 E-value=1 Score=338.29 Aligned_cols=206 Identities=33% Similarity=0.511 Sum_probs=178.2
Q ss_pred CCCCCCEECCCCCEEEEEEEEC------CCCEEEEEECCCC-CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEE
Q ss_conf 9895651055564769974504------6638999981589-97566889999999967127772358847741782169
Q 004674 518 NFSEKNKLGEGGFGPVYKGMLI------EGQEIAVKRLSKG-SGQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERML 590 (738)
Q Consensus 518 ~y~~~~~IG~G~fG~Vykg~~~------~g~~VavK~l~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~l 590 (738)
+++..++||+|+||.||+|.+. .++.||||+++.. .....++|.+|+.++++++|||||+++|+|.+....+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEE
T ss_conf 88586691358884899999857765888869999998801496899999999999985899898773649988998899
Q ss_pred EEEECCCCCHHHHHHHCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCC
Q ss_conf 9841799994578861388-------------888999999999999999999987399997474798999689848995
Q 004674 591 IYEYLPNKSLDYFIFDTTR-------------SKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTMN 657 (738)
Q Consensus 591 V~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~ 657 (738)
||||+++|+|.+++..... ...+++..+.+++.||+.||+|||+++ |+||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCEEECCCCC
T ss_conf 99818999499999862765433332211112468999999999999999999998689---977873623068879997
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCC
Q ss_conf 39995247511498865545333346667455011037988904589999999999993-9989999998
Q 004674 658 PKISDFGLARSFGLDQTEANTKRVVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIIC-GKKNRGFNHA 726 (738)
Q Consensus 658 vkL~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDVwSlGviL~ellt-G~~p~~~~~~ 726 (738)
+||+|||+++...............||++|||||++.+..++.++|||||||+||||+| |+.||.....
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~ 253 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred EEECCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 8988760202336777404734512577656989982799996300015799999999689999999899
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=337.08 Aligned_cols=201 Identities=26% Similarity=0.409 Sum_probs=181.3
Q ss_pred CCCCCCCCEECCCCCEEEEEEEECC-CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 0798956510555647699745046-638999981589975668899999999671277723588477417821699841
Q 004674 516 TDNFSEKNKLGEGGFGPVYKGMLIE-GQEIAVKRLSKGSGQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERMLIYEY 594 (738)
Q Consensus 516 ~~~y~~~~~IG~G~fG~Vykg~~~~-g~~VavK~l~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E~ 594 (738)
.+.|+..++||+|+||.||++.... ++.||+|++........+.+.+|+.+++.++|||||++++++.+.+.+||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 68438616962481848999999999989999998625546899999999999857998987168999989999999969
Q ss_pred CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 79999457886138888899999999999999999998739999747479899968984899539995247511498865
Q 004674 595 LPNKSLDYFIFDTTRSKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTMNPKISDFGLARSFGLDQT 674 (738)
Q Consensus 595 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~vkL~DfGla~~~~~~~~ 674 (738)
+++|+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 230 ~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 230 LEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp CTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEECCCCCEEEECCCCCEECCCCCC
T ss_conf 899828988761----69899999999999999999999889---04465787778985899989803726547778876
Q ss_pred CCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 545333346667455011037988904589999999999993998999999
Q 004674 675 EANTKRVVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIICGKKNRGFNH 725 (738)
Q Consensus 675 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDVwSlGviL~elltG~~p~~~~~ 725 (738)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||....
T Consensus 303 --~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 351 (423)
T 4fie_A 303 --RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351 (423)
T ss_dssp --CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred --CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf --4346664747279999779999968999999999999997879989869
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=336.43 Aligned_cols=204 Identities=24% Similarity=0.387 Sum_probs=179.9
Q ss_pred CCCCCCCCEECCCCCEEEEEEEECC-CCEEEEEECCCCC--CCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEE
Q ss_conf 0798956510555647699745046-6389999815899--756688999999996712777235884774178216998
Q 004674 516 TDNFSEKNKLGEGGFGPVYKGMLIE-GQEIAVKRLSKGS--GQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERMLIY 592 (738)
Q Consensus 516 ~~~y~~~~~IG~G~fG~Vykg~~~~-g~~VavK~l~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 592 (738)
.++|++.+.||+|+||.||++.... ++.||+|++.... ....+.+.+|+.++++++|||||++++++.+....+|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 12558847970277939999998899989999998658789799999999999998779989891999999899999999
Q ss_pred EECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCCC
Q ss_conf 41799994578861388888999999999999999999987399997474798999689848995399952475114988
Q 004674 593 EYLPNKSLDYFIFDTTRSKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTMNPKISDFGLARSFGLD 672 (738)
Q Consensus 593 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~vkL~DfGla~~~~~~ 672 (738)
||+++|+|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred ECCCCCCHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCCCHHHEEECCCCCEEECCCCCCEEECCC
T ss_conf 488998399999973-8999978999999999999999999899---151359789979878999897646521440688
Q ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 65545333346667455011037988904589999999999993998999999
Q 004674 673 QTEANTKRVVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIICGKKNRGFNH 725 (738)
Q Consensus 673 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDVwSlGviL~elltG~~p~~~~~ 725 (738)
. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||....
T Consensus 179 ~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 179 V--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp H--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred C--CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 5--41014578836039999879998959999999999999997879989969
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=336.25 Aligned_cols=200 Identities=26% Similarity=0.411 Sum_probs=180.2
Q ss_pred CCCCCCCEECCCCCEEEEEEEECC-CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEC
Q ss_conf 798956510555647699745046-6389999815899756688999999996712777235884774178216998417
Q 004674 517 DNFSEKNKLGEGGFGPVYKGMLIE-GQEIAVKRLSKGSGQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERMLIYEYL 595 (738)
Q Consensus 517 ~~y~~~~~IG~G~fG~Vykg~~~~-g~~VavK~l~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E~~ 595 (738)
+.|+..++||+|+||.||++.... ++.||+|++........+.+.+|+.+++.++|||||++++++.+.+..+|||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECC
T ss_conf 75387079602728299999998999899999985276568999999999998679989991999999899999999698
Q ss_pred CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 99994578861388888999999999999999999987399997474798999689848995399952475114988655
Q 004674 596 PNKSLDYFIFDTTRSKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTMNPKISDFGLARSFGLDQTE 675 (738)
Q Consensus 596 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~vkL~DfGla~~~~~~~~~ 675 (738)
++|+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~- 225 (346)
T 4fih_A 154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP- 225 (346)
T ss_dssp TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-
T ss_pred CCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCC-
T ss_conf 99808999871----89899999999999999999999888---35562788997887999889902757536678877-
Q ss_pred CCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 45333346667455011037988904589999999999993998999999
Q 004674 676 ANTKRVVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIICGKKNRGFNH 725 (738)
Q Consensus 676 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDVwSlGviL~elltG~~p~~~~~ 725 (738)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||....
T Consensus 226 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 274 (346)
T 4fih_A 226 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 274 (346)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred -CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf -5346562758279999779999968999999999999997879989859
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=335.01 Aligned_cols=204 Identities=28% Similarity=0.407 Sum_probs=182.9
Q ss_pred CCCCCCCEECCCCCEEEEEEEECC-CCEEEEEECCCC---CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEE
Q ss_conf 798956510555647699745046-638999981589---9756688999999996712777235884774178216998
Q 004674 517 DNFSEKNKLGEGGFGPVYKGMLIE-GQEIAVKRLSKG---SGQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERMLIY 592 (738)
Q Consensus 517 ~~y~~~~~IG~G~fG~Vykg~~~~-g~~VavK~l~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 592 (738)
++|++.+.||+|+||.||+++... ++.||+|++.+. .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
T ss_conf 23689889831648499999999999899999988888779789999999999998679989891999997389899999
Q ss_pred EECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCCC
Q ss_conf 41799994578861388888999999999999999999987399997474798999689848995399952475114988
Q 004674 593 EYLPNKSLDYFIFDTTRSKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTMNPKISDFGLARSFGLD 672 (738)
Q Consensus 593 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~vkL~DfGla~~~~~~ 672 (738)
||+++|+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ECCCCCCHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf 64899899999987---499999999999999999999999887---826878789969858988899876875025778
Q ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 655453333466674550110379889045899999999999939989999998
Q 004674 673 QTEANTKRVVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIICGKKNRGFNHA 726 (738)
Q Consensus 673 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDVwSlGviL~elltG~~p~~~~~~ 726 (738)
.........+||+.|||||++.+..|+.++||||+||++|||++|+.||...+.
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~ 239 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 776543675568030799897689999689899899999999749899899799
No 9
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=330.61 Aligned_cols=202 Identities=29% Similarity=0.477 Sum_probs=173.4
Q ss_pred CCCCCCCCEECCCCCEEEEEEEECCCCEEEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEE
Q ss_conf 0798956510555647699745046638999981589--97566889999999967127772358847741782169984
Q 004674 516 TDNFSEKNKLGEGGFGPVYKGMLIEGQEIAVKRLSKG--SGQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERMLIYE 593 (738)
Q Consensus 516 ~~~y~~~~~IG~G~fG~Vykg~~~~g~~VavK~l~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 593 (738)
.+++.+.++||+|+||+||+|++.. .||||+++.. .....++|.+|+.++++++|||||+++|++.+ +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHEEEEEEEEECCCCEEEEEEECC--CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC-CEEEEEEE
T ss_conf 7994984498208886899999899--68999997268999999999999999985899887469999978-95899997
Q ss_pred ECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCC
Q ss_conf 17999945788613888889999999999999999999873999974747989996898489953999524751149886
Q 004674 594 YLPNKSLDYFIFDTTRSKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTMNPKISDFGLARSFGLDQ 673 (738)
Q Consensus 594 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~vkL~DfGla~~~~~~~ 673 (738)
|+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+......
T Consensus 112 y~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCCHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEEECCCCEECCCCC
T ss_conf 48998788987524--899999999999999999999997799---5278557899788899908994415754246677
Q ss_pred CCCCCCCCCCCCCCCCHHCCCC---CCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 5545333346667455011037---988904589999999999993998999999
Q 004674 674 TEANTKRVVGTYGYMSPEYAID---GLFSVKSDVFSFGVLVLEIICGKKNRGFNH 725 (738)
Q Consensus 674 ~~~~~~~~~gt~~y~aPE~~~~---~~~t~~sDVwSlGviL~elltG~~p~~~~~ 725 (738)
........+||+.|||||++.+ .+++.++||||||++||||+||+.||....
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~ 241 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 6403156446877249878614689987868775728999999997889989999
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=327.03 Aligned_cols=201 Identities=25% Similarity=0.299 Sum_probs=174.5
Q ss_pred CCCCCCCCEECCCCCEEEEEEEECC-CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 0798956510555647699745046-638999981589975668899999999671277723588477417821699841
Q 004674 516 TDNFSEKNKLGEGGFGPVYKGMLIE-GQEIAVKRLSKGSGQGMEEFKNEVLLIAKLQHRNLVKLLGCCTQRDERMLIYEY 594 (738)
Q Consensus 516 ~~~y~~~~~IG~G~fG~Vykg~~~~-g~~VavK~l~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E~ 594 (738)
.+.|...++||+|+||.||++.... ++.||+|+++.... ..+|+.+++.++|||||++++++.+....+|||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH-----HHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 3351768685138780999999889998999999788886-----99999999857998999399999989999999966
Q ss_pred CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC-CEEEEEECCCCCCCCCC
Q ss_conf 79999457886138888899999999999999999998739999747479899968984899-53999524751149886
Q 004674 595 LPNKSLDYFIFDTTRSKLLDWSKRSHIIAGIARGLLYLHQDSRLRIIHRDLKASNVLLDNTM-NPKISDFGLARSFGLDQ 673 (738)
Q Consensus 595 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-~vkL~DfGla~~~~~~~ 673 (738)
+++|+|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++ .+||+|||+|+.+....
T Consensus 132 ~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 132 LEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCCCCHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHCC---CEECCCCHHHEEEECCCCEEEEEECCCCEECCCCC
T ss_conf 599869999987---699999999999999999999999889---04261677887995899979996278776856787
Q ss_pred CC---CCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 55---4533334666745501103798890458999999999999399899999988
Q 004674 674 TE---ANTKRVVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIICGKKNRGFNHAD 727 (738)
Q Consensus 674 ~~---~~~~~~~gt~~y~aPE~~~~~~~t~~sDVwSlGviL~elltG~~p~~~~~~~ 727 (738)
.. ......+||+.|||||++.+..++.++||||+|+++|||++|+.||......
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~ 262 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 262 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS
T ss_pred CCCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 654022178545580200899988999890899999999999999786998998999
Done!