Query 004677
Match_columns 737
No_of_seqs 236 out of 1573
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 18:06:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004677.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1976-1979//hhsearch_pdb/004677hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e8d_A Glycosyl hydrolase, fam 1.0 1 1 1122.1 46.9 554 37-735 2-584 (595)
2 3thd_A Beta-galactosidase; TIM 1.0 1 1 1108.2 47.3 576 31-735 3-618 (654)
3 3d3a_A Beta-galactosidase; pro 1.0 1 1 1051.1 45.0 564 36-736 5-587 (612)
4 1tg7_A Beta-galactosidase; TIM 1.0 1 1 1015.9 47.2 660 35-736 2-947 (971)
5 3og2_A Beta-galactosidase; TIM 1.0 1 1 954.0 49.9 658 32-734 19-977 (1003)
6 3u7v_A Beta-galactosidase; str 1.0 1 1 301.7 11.9 156 36-201 41-212 (552)
7 1vem_A Beta-amylase; beta-alph 1.0 1 1 210.3 3.5 240 51-314 12-296 (516)
8 3tty_A Beta-GAL, beta-galactos 1.0 1 1 210.1 19.8 284 52-357 7-390 (675)
9 1kwg_A Beta-galactosidase; TIM 1.0 1 1 204.1 19.1 271 55-354 1-391 (645)
10 3pzg_A Mannan endo-1,4-beta-ma 1.0 1 1 171.4 8.5 182 41-229 15-222 (383)
No 1
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=1.00 E-value=1 Score=1122.05 Aligned_cols=554 Identities=28% Similarity=0.524 Sum_probs=455.4
Q ss_pred EEEEECCCCEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCHHHHHHHHHH
Q ss_conf 03899057199989796999998509999932279999999987998899800178779978702203603499999999
Q 004677 37 ASVSYDHKAVIINGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKLV 116 (737)
Q Consensus 37 ~~v~~d~~~~~idGk~~~~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~la 116 (737)
.+|+++ ++|++||||++++||++||+|+|+++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++|+++|
T Consensus 2 ~~F~i~-~~f~~dG~p~~i~~G~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a 80 (595)
T 4e8d_A 2 TRFEIR-DDFYLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIA 80 (595)
T ss_dssp CCEEES-SSEEETTEECCCEEEEECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHH
T ss_pred CEEEEC-CEEEECCEEEEEEEEEECHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHHHHH
T ss_conf 707967-7799999898998998572229999999999999973997799853678708988754134636699999999
Q ss_pred HHCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
Q ss_conf 98396999404940011018899880623379927506985579999999999999987133331379854950554466
Q 004677 117 QQAGLYVHLRIGPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIENEF 196 (737)
Q Consensus 117 ~~~GL~vilr~GPyi~aEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~~~~~~gGpII~~QiENEy 196 (737)
+++||+|||||||||||||++||+|+||.++| +++|++|+.|++++++|+++|+++++ ++++++||||||+||||||
T Consensus 81 ~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEy 157 (595)
T 4e8d_A 81 QDLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV--PRLLDNGGNILMMQVENEY 157 (595)
T ss_dssp HHTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSG
T ss_pred HHCCCEEEEECCCCEECCCCCCCCCHHHCCCC-CEECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEECCCCC
T ss_conf 98699899704774301217782775550687-45315897999999999999999998--8741069988999755434
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCC-------CC--CCCCCCCC-CCCC-CCC------CCCCCCC-
Q ss_conf 78666789332999999999987169985527605889-------99--86322778-8643-544------7799999-
Q 004677 197 GPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDD-------AP--DPVINTCN-GFYC-EKF------VPNQNYK- 258 (737)
Q Consensus 197 g~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~-------~~--~~~i~~~~-g~~~-~~~------~~~~p~~- 258 (737)
|+++ ++++||+||++++++.|++|||+|||+.. .. +++++||| +.+| +.| .+.+|++
T Consensus 158 G~~~-----~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~ 232 (595)
T 4e8d_A 158 GSYG-----EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKW 232 (595)
T ss_dssp GGTC-----CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCC-----CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 6657-----71899999999999759967899825951310458853788837776179856676778887630389999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCC--------CCCCCCCCCCCCC
Q ss_conf 85243233323556599998899678999999999809805454210148798988989--------7422466889878
Q 004677 259 PKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHGGTNFGRTSGG--------FVATSYDYDAPID 330 (737)
Q Consensus 259 P~~~tE~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~g~--------~~~TSYDYdApi~ 330 (737)
|+|++|||+||||+||++++++++++++..++++++.| + +||||||||||||+|+|+ .++|||||||||+
T Consensus 233 P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g-s-~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~ 310 (595)
T 4e8d_A 233 PLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG-S-INLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLD 310 (595)
T ss_dssp CCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS-E-EEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-C-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 80898631654455699877789999999999999769-9-549855453272424687777777778777667798058
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCC
Q ss_conf 67998951279999999998740487668998323589864215723687641023203577630079745830038986
Q 004677 331 EYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKSLGKNQEAHVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPW 410 (737)
Q Consensus 331 E~G~~~t~Ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~~~~~ 410 (737)
|+|++ ||||.++|+++..+. .+ .+.+.|...++ ..|. +|.+..
T Consensus 311 E~G~~-t~Ky~~lr~~i~~~~--~~-~p~~~P~~~~~------~~~~-------------------~v~l~~-------- 353 (595)
T 4e8d_A 311 EEGNP-TAKYLAVKKMMATHF--SE-YPQLEPLYKES------MELD-------------------AIPLVE-------- 353 (595)
T ss_dssp TTSCB-CHHHHHHHHHHHHHC--TT-SCCCCCCCCCB------CCEE-------------------EEEEEE--------
T ss_pred CCCCC-CHHHHHHHHHHHHHC--CC-CCCCCCCCCCC------CCCC-------------------EEEECC--------
T ss_conf 67783-478999999999747--79-99999987764------3565-------------------087504--------
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCC
Q ss_conf 10104886642111320021133320000014445331110135889998766673145431468884569999984378
Q 004677 411 SISVLPDCKTAVFNTARVGVQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNID 490 (737)
Q Consensus 411 sv~il~~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~Eql~~T~d~~GyilYrt~i~~~ 490 (737)
.++ ++++++.. .+|+.+ ..+.+||+++| .+||+||||+++..
T Consensus 354 ~~~--------L~~~l~~l-------~~~~~s--------------------~~P~~mE~lgq---~~GyvlY~t~i~~~ 395 (595)
T 4e8d_A 354 KVS--------LFETLDSL-------SSPVES--------------------LYPQKMEELGQ---SYGYLLYRTETNWD 395 (595)
T ss_dssp EEE--------HHHHHHHH-------CCCEEE--------------------SSCCBTGGGTC---CSSEEEEEEEEECS
T ss_pred CCC--------HHHHHHHC-------CCCCCC--------------------CCCCCHHHCCC---CCCEEEEEECCCCC
T ss_conf 154--------89966550-------776436--------------------99889889299---76759998226888
Q ss_pred CCCCCCCCCCCCCEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCC-CEEEEEEECCCCCCCCCCC--CC
Q ss_conf 98443358999826865834099999999999999743589805995000038985-3999998447986653476--84
Q 004677 491 SNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRPGV-NKISLLSTSVGLPNVGTHF--EK 567 (737)
Q Consensus 491 ~~~~~~~~~~~~~L~i~~~~d~a~vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~-~~L~ILven~Gr~NyG~~~--~~ 567 (737)
.. ...|++.+++|||+|||||+++|++++.....++.++ ...+. ++|+||||||||+|||..+ ++
T Consensus 396 ~~--------~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~~i~~~----~~~~~~~~L~ILVEN~GRvNyG~~~~~~~ 463 (595)
T 4e8d_A 396 AE--------EERLRIIDGRDRAQLYVDGQWVKTQYQTEIGEDIFYQ----GKKKGLSRLDILIENMGRVNYGHKFLADT 463 (595)
T ss_dssp SS--------SEEEEEEEEESEEEEEETTEEEEEEEGGGTTSCEEEC----CCSSSEEEEEEEEECCCCCCSGGGTTCGG
T ss_pred CC--------CCEEECCCCCEEEEEEECCEEEEEEECCCCCCEEEEE----CCCCCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 88--------7346327874489999899799999745676147853----57788778999998589751675568688
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEE
Q ss_conf 56543254898552487412555702786157210011343489987643446644778884499999977999998189
Q 004677 568 WNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLAL 647 (737)
Q Consensus 568 ~~kGI~g~V~l~g~~~~~~~L~~~~W~~~~gL~gE~~~~~~~~~~~~~~W~~~~~~~~~~~~t~Yk~~F~i~~~~d~~~L 647 (737)
++|||+|+|+|++. .|++|+ .|+++|+.- ...+|.... ...+|+||+++|+++++.| |||
T Consensus 464 ~~KGi~g~V~l~~~-----~l~~W~-~~~L~l~~~----------~~~~~~~~~---~~~~P~fy~g~f~~~~~~D-TfL 523 (595)
T 4e8d_A 464 QRKGIRTGVCKDLH-----FLLNWK-HYPLPLDNP----------EKIDFSKGW---TQGQPAFYAYDFTVEEPKD-TYL 523 (595)
T ss_dssp GSCEEEEEEEETTE-----ECCCEE-EEEECCCCG----------GGCCTTSCC---CTTSCEEEEEEEEESSCCB-EEE
T ss_pred CCCCCCCCEEECCE-----ECCCCE-EEEECCCHH----------HHCCCCCCC---CCCCCEEEEEEEECCCCCC-EEE
T ss_conf 88787887699999-----857848-976333113----------222345566---7889758999997599888-799
Q ss_pred ECCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 61897159999988111101269888899888877777664323467899805654058555347885899998348998
Q 004677 648 DMGAMGKGMVWINGQSIGRHWPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWGGEP 727 (737)
Q Consensus 648 d~~g~gKG~v~VNG~nlGRYW~~~~~~G~~~~~~~~g~~~~~~~~~~~~~PQqtlYhvP~~~Lk~G~N~IvifEe~g~~p 727 (737)
||+||+||+|||||+||||||+ +| |||||| ||++|||+|.|+|||||+++...
T Consensus 524 d~~gwgKG~v~VNG~nLGRYW~----~G----------------------PQ~tLY-vP~~~Lk~G~NeIvvfEl~~~~~ 576 (595)
T 4e8d_A 524 DLSEFGKGVAFVNGQNLGRFWN----VG----------------------PTLSLY-IPHSYLKEGANRIIIFETEGQYK 576 (595)
T ss_dssp ECTTCCEEEEEETTEEEEEEET----TC----------------------SBCEEE-ECGGGSCSEEEEEEEEESSSCCC
T ss_pred ECCCCCEEEEEECCEEEECCCC----CC----------------------CEEEEE-ECHHHHCCCCCEEEEEEECCCCC
T ss_conf 6788864889988721352467----79----------------------768899-63899576872699999527888
Q ss_pred CCEEEEEE
Q ss_conf 61799997
Q 004677 728 HWISLLKR 735 (737)
Q Consensus 728 ~~i~l~~~ 735 (737)
..|+|++.
T Consensus 577 ~~i~~~~~ 584 (595)
T 4e8d_A 577 EEIHLTRK 584 (595)
T ss_dssp SEEEEESS
T ss_pred CEEEEECC
T ss_conf 54786346
No 2
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=1.00 E-value=1 Score=1108.16 Aligned_cols=576 Identities=28% Similarity=0.435 Sum_probs=449.3
Q ss_pred CCCCCCEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCHHHH
Q ss_conf 22244203899057199989796999998509999932279999999987998899800178779978702203603499
Q 004677 31 EISFVKASVSYDHKAVIINGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLV 110 (737)
Q Consensus 31 ~~~~~~~~v~~d~~~~~idGk~~~~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~ 110 (737)
+.+++++.|+||+++|++||||++++||++||+|+|+++|+++|+|||++|+|+|++||+||.|||+||+|||+|++||+
T Consensus 3 ~~~~r~~~v~~d~~~f~ldGkp~~i~sG~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~ 82 (654)
T 3thd_A 3 NATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVE 82 (654)
T ss_dssp ---CCCEEEETTTTEEEETTEEECCEEEECCGGGSCGGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHH
T ss_pred CCCCCCEEEEECCCEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCHHHHH
T ss_conf 66787179997289799999787898886464549989999999999971998899996336408989846745537799
Q ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 99999998396999404940011018899880623379927506985579999999999999987133331379854950
Q 004677 111 RFIKLVQQAGLYVHLRIGPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILS 190 (737)
Q Consensus 111 ~fl~la~~~GL~vilr~GPyi~aEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~~~~~~gGpII~~ 190 (737)
+||++|+++||+|||||||||||||++||+|.||.++|++++|++|+.|++++++|+++|+++++ ++++++||||||+
T Consensus 83 ~fl~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~--~~~~~~ggpVI~~ 160 (654)
T 3thd_A 83 YFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMK--PLLYQNGGPVITV 160 (654)
T ss_dssp HHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEE
T ss_pred HHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEE
T ss_conf 99999998699899556774321038886896785599845742998999999999999999852--4312479978999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCEEEECCCCC-------CCCCCCCCCCC---CC-C---CCCCCC
Q ss_conf 5544667866678933299999999998716-99855276058899-------98632277886---43-5---447799
Q 004677 191 QIENEFGPVEWDIGAPGKAYAKWAAQMAVGL-NTGVPWVMCKQDDA-------PDPVINTCNGF---YC-E---KFVPNQ 255 (737)
Q Consensus 191 QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~-g~~vp~~~~~~~~~-------~~~~i~~~~g~---~~-~---~~~~~~ 255 (737)
|||||||++ +.|+++||+||++++++. |++||+++||+... ..+++.+.++. .. + .+...+
T Consensus 161 QvENEyG~y----~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~~~~~~~~~g~~~g~~~t~~f~~~~~~~~~~~~~~~~~ 236 (654)
T 3thd_A 161 QVENEYGSY----FACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCE 236 (654)
T ss_dssp ECSSCGGGS----SCCCHHHHHHHHHHHHHHHCSSSEEEEEEESSHHHHHHHCBTTBEEEEECCTTSCHHHHHHHHHHHC
T ss_pred EECCCCCCC----CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHC
T ss_conf 831445665----6561999999999998744996556960698534434787577131024687963789999999748
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCC
Q ss_conf 999852432333235565999988996789999999998098054542101487989889897-----422466889878
Q 004677 256 NYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHGGTNFGRTSGGF-----VATSYDYDAPID 330 (737)
Q Consensus 256 p~~P~~~tE~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~g~~-----~~TSYDYdApi~ 330 (737)
|++|+|++|||+||||+||++++.+++++++..++++++.|+| +||||||||||||||+||. ++|||||||||+
T Consensus 237 p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~N~YM~hGGTNfG~~~Ga~~~~~~~~TSYDYdApi~ 315 (654)
T 3thd_A 237 PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGAS-VNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLS 315 (654)
T ss_dssp SSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHTTCE-EEEECSBCCBCCTTCBCEETTTEECCSBCCTTCSBC
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9989599610153577579987788989999999999965984-589863453362324678877887356676787246
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCC
Q ss_conf 67998951279999999998740487668998323589864215723687641023203577630079745830038986
Q 004677 331 EYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKSLGKNQEAHVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPW 410 (737)
Q Consensus 331 E~G~~~t~Ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~~~~~ 410 (737)
|+|++ ||||.++|+++. .+.+..++..|...++ ..|. +|.+..
T Consensus 316 E~G~~-t~Ky~~lr~li~---~~~~~~~~~~P~~~p~------~~~~-------------------~v~l~~-------- 358 (654)
T 3thd_A 316 EAGDL-TEKYFALRNIIQ---KFEKVPEGPIPPSTPK------FAYG-------------------KVTLEK-------- 358 (654)
T ss_dssp TTCCB-CHHHHHHHHHHT---TTSCCCCSCCCCCCCB------CCCE-------------------EEECEE--------
T ss_pred CCCCC-CHHHHHHHHHHH---HHCCCCCCCCCCCCCC------CCCC-------------------CEEECC--------
T ss_conf 35673-378999999999---7147998889998764------5667-------------------575222--------
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCC
Q ss_conf 10104886642111320021133320000014445331110135889998766673145431468884569999984378
Q 004677 411 SISVLPDCKTAVFNTARVGVQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNID 490 (737)
Q Consensus 411 sv~il~~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~Eql~~T~d~~GyilYrt~i~~~ 490 (737)
.++ +++.++... ..+|+.+ ..+.+||+++| .+||++|||+++.+
T Consensus 359 ~~~--------L~~~l~~l~-----~~~~~~s--------------------~~P~tmE~l~Q---~~GyvlY~t~i~~~ 402 (654)
T 3thd_A 359 LKT--------VGAALDILC-----PSGPIKS--------------------LYPLTFIQVKQ---HYGFVLYRTTLPQD 402 (654)
T ss_dssp EEE--------TTTTHHHHC-----TTCCEEE--------------------SSCCBTGGGTC---CSSEEEEEEECSSC
T ss_pred CCC--------HHHHHHHHC-----CCCCCCC--------------------CCCCCHHHHCC---CCCEEEEEEECCCC
T ss_conf 234--------899777627-----6777536--------------------99889899288---75769998325777
Q ss_pred CCCCCCCCCCCCCEE--ECCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCC
Q ss_conf 984433589998268--658340999999999999997435898059950000389853999998447986653476845
Q 004677 491 SNEGFLKNGQDPLLT--IWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRPGVNKISLLSTSVGLPNVGTHFEKW 568 (737)
Q Consensus 491 ~~~~~~~~~~~~~L~--i~~~~d~a~vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~Gr~NyG~~~~~~ 568 (737)
... ...|. +.+++|||+|||||+++|++++.. ..+++++ ... .++|+||||||||+|||..+ ++
T Consensus 403 ~~~-------~~~l~l~~~~v~Dra~Vfvdg~~~G~l~r~~---~~~l~~~--~~~-~~~L~ILVEN~GRvNyG~~i-~d 468 (654)
T 3thd_A 403 CSN-------PAPLSSPLNGVHDRAYVAVDGIPQGVLERNN---VITLNIT--GKA-GATLDLLVENMGRVNYGAYI-ND 468 (654)
T ss_dssp EEE-------EEEEECTTCCEESEEEEEETTEEEEEEETTT---BCEEEEE--ECT-TCEEEEEEECCCCBCSSGGG-CC
T ss_pred CCC-------CCCEEECCCCCCEEEEEEECCEEEEEEECCC---CEEEECC--CCC-CCEEEEEEECCCCCCCCCCC-CC
T ss_conf 788-------8403430478632799988997999996156---5267505--888-98899999748865468877-87
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC--
Q ss_conf 6543254898552487412555702786157210011343-----489987643446644778884499999977999--
Q 004677 569 NAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHT-----VSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPG-- 641 (737)
Q Consensus 569 ~kGI~g~V~l~g~~~~~~~L~~~~W~~~~gL~gE~~~~~~-----~~~~~~~~W~~~~~~~~~~~~t~Yk~~F~i~~~-- 641 (737)
+|||+|+|+|++. .|++|+ .|++++......... ........|.+.. ....+|+||+++|++++.
T Consensus 469 ~KGi~g~V~l~~~-----~l~~W~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~fy~g~f~i~~~~~ 540 (654)
T 3thd_A 469 FKGLVSNLTLSSN-----ILTDWT-IFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNS--SNYTLPAFYMGNFSIPSGIP 540 (654)
T ss_dssp CCEECSCCEETTE-----ECCCEE-EEECCHHHHHHTTTTTTCCC----------------CCCCCEEEEEEECCCSSCT
T ss_pred CCCCCCCEEECCE-----ECCCCE-EEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCCCEEEEEEEECCCCCC
T ss_conf 8988776578999-----827848-986526125544320122333322233445666--67888779999997267778
Q ss_pred ---CCCEEEECCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC-CCEE
Q ss_conf ---998189618971599999881111012698888998888777776643234678998056540585553478-8589
Q 004677 642 ---NDPLALDMGAMGKGMVWINGQSIGRHWPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWLKPS-GNLL 717 (737)
Q Consensus 642 ---~d~~~Ld~~g~gKG~v~VNG~nlGRYW~~~~~~G~~~~~~~~g~~~~~~~~~~~~~PQqtlYhvP~~~Lk~G-~N~I 717 (737)
.| |||||+||+||+|||||+||||||+. +| |||||| ||++|||+| .|+|
T Consensus 541 ~~p~D-TFLd~~gWgKGvV~VNG~NLGRYW~~---~G----------------------PQ~TLY-vP~p~Lk~G~~NeI 593 (654)
T 3thd_A 541 DLPQD-TFIQFPGWTKGQVWINGFNLGRYWPA---RG----------------------PQLTLF-VPQHILMTSAPNTI 593 (654)
T ss_dssp TCSCB-EEEECTTCCSEEEEETTEEEEEECTT---TC----------------------SCCCEE-ECGGGCCSSSCEEE
T ss_pred CCCCC-EEEECCCCCEEEEEECCCCCCCCCCC---CC----------------------CEEEEE-ECHHHHCCCCCCEE
T ss_conf 88877-79967888707999898025425477---79----------------------768889-64899588998469
Q ss_pred EEEEECCCCC-------CCEEEEEE
Q ss_conf 9998348998-------61799997
Q 004677 718 VVFEEWGGEP-------HWISLLKR 735 (737)
Q Consensus 718 vifEe~g~~p-------~~i~l~~~ 735 (737)
||||+++... ..|+|++.
T Consensus 594 iVfEle~~~~~~~~~~~~~i~~~~~ 618 (654)
T 3thd_A 594 TVLELEWAPCSSDDPELCAVTFVDR 618 (654)
T ss_dssp EEEESSCCSCSSSCGGGSEEEEESS
T ss_pred EEEEEECCCCCCCCCCCCEEEEECC
T ss_conf 9999516876555566525996355
No 3
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=1.00 E-value=1 Score=1051.07 Aligned_cols=564 Identities=30% Similarity=0.510 Sum_probs=462.5
Q ss_pred CEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCHHHHHHHHH
Q ss_conf 20389905719998979699999850999993227999999998799889980017877997870220360349999999
Q 004677 36 KASVSYDHKAVIINGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKL 115 (737)
Q Consensus 36 ~~~v~~d~~~~~idGk~~~~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~l 115 (737)
..+|++|+++|++||||++++||++||+|+++++|+++|++||++|+|+|++||||+.|||+||+|||++..++++|+++
T Consensus 5 ~r~v~~~~~~f~lnGkp~~i~gg~~Hy~r~~~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~l 84 (612)
T 3d3a_A 5 EGTFEVGKNTFLLNGEPFVVKAAEIHYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRL 84 (612)
T ss_dssp CCCEEECSSSEEETTEEECCEEEEECGGGSCGGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHH
T ss_pred CCEEEEECCEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 66699839999999989999888826766998999999999997399899972707732898983480689899999999
Q ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
Q ss_conf 99839699940494001101889988062337992750698557999999999999998713333137985495055446
Q 004677 116 VQQAGLYVHLRIGPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIENE 195 (737)
Q Consensus 116 a~~~GL~vilr~GPyi~aEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~~~~~~gGpII~~QiENE 195 (737)
|+++||+||+|+||||||||++||+|.||.+.+++.+|+++|.|++++++|+++|+++++ +++++|||||||||||||
T Consensus 85 a~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~--~~~~~n~p~II~wqIeNE 162 (612)
T 3d3a_A 85 AQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKKDIKLREQDPYYMERVKLFLNEVGKQLA--DLQISKGGNIIMVQVENE 162 (612)
T ss_dssp HHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEECSSC
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCEEEEEECCC
T ss_conf 997799999956854466011489735422478833437998999999999999999874--110006997778740344
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEECCC-----CCCCCCCCCCCCC---C-CCCC---CCCCCCCCCCC
Q ss_conf 6786667893329999999999871699-8552760588-----9998632277886---4-3544---77999998524
Q 004677 196 FGPVEWDIGAPGKAYAKWAAQMAVGLNT-GVPWVMCKQD-----DAPDPVINTCNGF---Y-CEKF---VPNQNYKPKMW 262 (737)
Q Consensus 196 yg~~~~~~~~~~~~y~~~l~~~~~~~g~-~vp~~~~~~~-----~~~~~~i~~~~g~---~-~~~~---~~~~p~~P~~~ 262 (737)
||+++ .+++|++++++.+++.|+ ++|+++|+.. ...+++++++|.. . ++.+ .+.+|++|.|+
T Consensus 163 yg~yg-----~~~~y~~~l~~~l~~~g~~~vp~~~~~~~~~~~~~~~~~~~~t~nf~s~~~~~~~~~~~~~~~p~~P~~~ 237 (612)
T 3d3a_A 163 YGAFG-----IDKPYISEIRDMVKQAGFTGVPLFQCDWNSNFENNALDDLLWTINFGTGANIDEQFKRLKELRPDTPLMC 237 (612)
T ss_dssp GGGTC-----CCHHHHHHHHHHHHHHTCCSSCEEEEECTTTGGGTCCTTSEEEEEEETTCCHHHHHHHHHHHCTTSCCEE
T ss_pred CCCCC-----CHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
T ss_conf 56557-----6599999999999871899603300045632225777876664556777217899999987455899620
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCC----C--CCCCCCCCCCCCCCCCCC
Q ss_conf 3233323556599998899678999999999809805454210148798988989----7--422466889878679989
Q 004677 263 TEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHGGTNFGRTSGG----F--VATSYDYDAPIDEYGLLN 336 (737)
Q Consensus 263 tE~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~g~----~--~~TSYDYdApi~E~G~~~ 336 (737)
+|||+|||++||++++.+++++++.++++++++|+| +||||||||||||+|+|+ + ++|||||||||+|+|++
T Consensus 238 ~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~ga~~~~~~~~~tSYDy~Apl~E~g~~- 315 (612)
T 3d3a_A 238 SEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNIS-FSLYMTHGGTSFGHWGGANFPNFSPTCTSYDYDAPINESGKV- 315 (612)
T ss_dssp EEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTTTCE-EEEECSBCCBCCTTCBCEETTTTEEBCSBCCTTCSBCTTSCC-
T ss_pred ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC-
T ss_conf 023467650124777667999999999999986996-686353013477856666887766414531368724757873-
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEECC
Q ss_conf 51279999999998740487668998323589864215723687641023203577630079745830038986101048
Q 004677 337 EPKWGHLRDLHKAIKLCEPALVSVDPTVKSLGKNQEAHVFNSKSGKCAAFLANYDTTFSAKVSFGNAQYDLPPWSISVLP 416 (737)
Q Consensus 337 t~Ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~~~~~sv~il~ 416 (737)
||||.++|+++..+.....++ +..|...+ ++.+|++++.
T Consensus 316 ~~ky~~lr~~~~~~~~~~~~~-~~~p~~~~-------------------------------------~~~~~~~~~~--- 354 (612)
T 3d3a_A 316 TPKYLEVRNLLGNYLPEGETL-PEIPDSIP-------------------------------------TIAIPTIKMT--- 354 (612)
T ss_dssp CHHHHHHHHHHTTSSCTTCCC-CCCCCCCC-------------------------------------BCCEEEEECC---
T ss_pred CHHHHHHHHHHHHHCCCCCCC-CCCCCCCC-------------------------------------CCCCCCEEEE---
T ss_conf 278999999999853467776-77888876-------------------------------------4545658774---
Q ss_pred CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCC
Q ss_conf 86642111320021133320000014445331110135889998766673145431468884569999984378984433
Q 004677 417 DCKTAVFNTARVGVQSSQKKFVPVINAFSWQSYIEETASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFL 496 (737)
Q Consensus 417 ~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~Eql~~T~d~~GyilYrt~i~~~~~~~~~ 496 (737)
+++ ..|+.+++++. -..+.+|||++| .+||+||||+++....
T Consensus 355 -------~~~-----------------~l~~~~~~~~~-------~~~p~~~E~l~q---~~gy~lY~t~i~~~~~---- 396 (612)
T 3d3a_A 355 -------EMA-----------------VLFDNLPHPKE-------SEDIRTMEAFDQ---GWGSILYRTSLSASDK---- 396 (612)
T ss_dssp -------EEE-----------------EGGGGCCCCEE-------ESSCCBGGGGTC---CSSEEEEEEEECCBSS----
T ss_pred -------EEE-----------------EHHHHCCCCCC-------CCCCCCHHHHCC---CCCEEEEEEEECCCCC----
T ss_conf -------261-----------------58884788634-------789889999598---7775999988547888----
Q ss_pred CCCCCCCEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 58999826865834099999999999999743589805995000038985399999844798665347684565432548
Q 004677 497 KNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRPGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPV 576 (737)
Q Consensus 497 ~~~~~~~L~i~~~~d~a~vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~Gr~NyG~~~~~~~kGI~g~V 576 (737)
.+.|++.+++|+++|||||+++|++++......+.+ + +..+.++|+||||||||+|||..+ .++|||+|+|
T Consensus 397 ----~~~L~i~~~~D~a~Vfvng~~~G~~~~~~~~~~~~~--~--~~~~~~~L~iLven~Gr~NyG~~~-~~~kGi~g~V 467 (612)
T 3d3a_A 397 ----EQTLLITEAHDWAQVFLNGKKLATLSRLKGEGVVKL--P--PLKEGDRLDILVEAMGRMNFGKGI-YDWKGITEKV 467 (612)
T ss_dssp ----CEEEEEEEEESEEEEEETTEEEEEEETTTTCCEEEE--C--CBCTTEEEEEEEECCCCCCSGGGG-CCCCEEEEEE
T ss_pred ----CCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEE--E--CCCCCCEEEEEEEECCCCCCCCCC-CCCCCCCCCE
T ss_conf ----754985478708999999999999981147726986--5--378985899999956987668545-5798777626
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCEEE
Q ss_conf 98552487412555702786157210011343489987643446644778884499999977999998189618971599
Q 004677 577 TLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGSSSVEWAQGASLAQKQPMTWYKTTFNVPPGNDPLALDMGAMGKGM 656 (737)
Q Consensus 577 ~l~g~~~~~~~L~~~~W~~~~gL~gE~~~~~~~~~~~~~~W~~~~~~~~~~~~t~Yk~~F~i~~~~d~~~Ld~~g~gKG~ 656 (737)
+|++ .+++.+|++|+| |+++|.+|.. ..++|.+.... .++|+|||++|+++++.| |||||+|||||+
T Consensus 468 ~l~~-~~~~~~l~~W~~-y~l~l~~~~~--------~~~~~~~~~~~--~~~p~~yk~~f~~~~~~D-t~Ld~~g~gKG~ 534 (612)
T 3d3a_A 468 ELQS-DKGVELVKDWQV-YTIPVDYSFA--------RDKQYKQQENA--ENQPAYYRSTFNLNELGD-TFLNMMNWSKGM 534 (612)
T ss_dssp EEEE-TTEEEECCCEEE-EEECCCHHHH--------HSSCCBC-------CCCEEEEEEEEESSCCB-EEEECTTCCEEE
T ss_pred EECC-CCCCEECCCCEE-EEECCCCCCC--------CCCCCCCCCCC--CCCCEEEEEEEECCCCCC-EEEECCCCCCEE
T ss_conf 9858-867434368669-9834676422--------23553456777--889889999998899873-899657787379
Q ss_pred EEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEE
Q ss_conf 99988111101269888899888877777664323467899805654058555347885899998348998617999972
Q 004677 657 VWINGQSIGRHWPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWLKPSGNLLVVFEEWGGEPHWISLLKRT 736 (737)
Q Consensus 657 v~VNG~nlGRYW~~~~~~G~~~~~~~~g~~~~~~~~~~~~~PQqtlYhvP~~~Lk~G~N~IvifEe~g~~p~~i~l~~~~ 736 (737)
|||||+||||||+ +| |||||| ||++|||+|+|+||||||++..+..|++++..
T Consensus 535 vwVNG~nlGRYW~----~G----------------------PqqtlY-vP~~~Lk~g~N~ivvfE~~~~~~~~i~~~~~p 587 (612)
T 3d3a_A 535 VWVNGHAIGRYWE----IG----------------------PQQTLY-VPGCWLKKGENEIIILDMAGPSKAETEGLRQP 587 (612)
T ss_dssp EEETTEEEEEEET----TC----------------------SCCEEE-ECGGGCCSEEEEEEEEESSCCSSSEEEEESSC
T ss_pred EEECCEEEEEEEE----CC----------------------CEEEEE-ECHHHCCCCCCEEEEEEECCCCCCEEEEECCC
T ss_conf 9998875890895----29----------------------889988-15899178974899999768988548854665
No 4
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=1.00 E-value=1 Score=1015.93 Aligned_cols=660 Identities=25% Similarity=0.405 Sum_probs=517.0
Q ss_pred CCEEEEECCCCEEECCEEEEEEEEEEECCCCC-CCCHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCHHHHHHH
Q ss_conf 42038990571999897969999985099999-32279999999987998899800178779978702203603499999
Q 004677 35 VKASVSYDHKAVIINGQKRILISGSIHYPRST-PEMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFI 113 (737)
Q Consensus 35 ~~~~v~~d~~~~~idGk~~~~~sG~~Hy~r~~-~~~W~~~l~k~Ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl 113 (737)
....|+||+++|++||||++++||++||+|+| |++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||
T Consensus 2 ~~~~v~~d~~~~~idG~p~~l~sG~~hy~r~p~~~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl 81 (971)
T 1tg7_A 2 LQKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFF 81 (971)
T ss_dssp CCSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHH
T ss_pred CCCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCEECCCCHHHHHHHH
T ss_conf 65369984887999994999999888821089467899999999970999999964677708988832245667899999
Q ss_pred HHHHHCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
Q ss_conf 99998396999404940011018899880623379927506985579999999999999987133331379854950554
Q 004677 114 KLVQQAGLYVHLRIGPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIE 193 (737)
Q Consensus 114 ~la~~~GL~vilr~GPyi~aEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~~~~~~gGpII~~QiE 193 (737)
++|+++||+|||||||||||||++||+|.||.++|+ ++|++||.|++++++|+++|+++++ +++++|||||||||||
T Consensus 82 ~~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~~~p~-~lR~~~p~y~~~~~~~~~~l~~~~~--~~~~~~ggpVI~~Qve 158 (971)
T 1tg7_A 82 DAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDG-ILRTSDEAYLKATDNYASNIAATIA--KAQITNGGPIILYQPE 158 (971)
T ss_dssp HHHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSS-CTTSSCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEECCS
T ss_pred HHHHHCCCEEEEECCCCCCCEECCCCCCEEECCCCC-EECCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCEEEEECC
T ss_conf 999985998997058742114447873156035688-7547998999999999999999986--4320179977787326
Q ss_pred CCCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCC----CCC---CCCCCC------CCCCCC----------
Q ss_conf 4667866-6789332999999999987169985527605889----998---632277------886435----------
Q 004677 194 NEFGPVE-WDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDD----APD---PVINTC------NGFYCE---------- 249 (737)
Q Consensus 194 NEyg~~~-~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~----~~~---~~i~~~------~g~~~~---------- 249 (737)
||||++. .++...+++||+|+++++++.|++||++||++.. .+. +.++.. .+++|.
T Consensus 159 NEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~ 238 (971)
T 1tg7_A 159 NEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNL 238 (971)
T ss_dssp SCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 65676666653166999999999999970998339995475445546543357324875377766565677554200000
Q ss_pred ------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-----HHHHHHCCEEEEEEEECCCCCCCCCCCCC
Q ss_conf ------4477999998524323332355659999889967899999-----99998098054542101487989889897
Q 004677 250 ------KFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSV-----ARFIQSGGSFINYYMYHGGTNFGRTSGGF 318 (737)
Q Consensus 250 ------~~~~~~p~~P~~~tE~~~Gwf~~wG~~~~~~~~~~~~~~~-----~~~l~~g~s~~n~YM~hGGTNfG~~~g~~ 318 (737)
.++..+|++|.|++|||+|||++||+.++++++++.+..+ ..+++.|++.+||||||||||||+|+|+.
T Consensus 239 ~~~~~d~~r~~~p~~P~~~~E~~~Gw~~~Wg~~~~~~~~~~~~~~~~~~~~~~~la~Ga~~vnyYm~~GGTNfG~~~g~~ 318 (971)
T 1tg7_A 239 PTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLGHPG 318 (971)
T ss_dssp CCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCBCTT
T ss_pred CHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC
T ss_conf 15699986423899997998137857567788765666355768999999999997799789999710435776567877
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCCCCCEEEECCCC---------------
Q ss_conf 422466889878679989512799999999987404876689983235---89864215723687---------------
Q 004677 319 VATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKS---LGKNQEAHVFNSKS--------------- 380 (737)
Q Consensus 319 ~~TSYDYdApi~E~G~~~t~Ky~~lr~l~~~~~~~~~~l~~~~p~~~~---~~~~~~~~~~~~~~--------------- 380 (737)
++|||||||||+|+|+++++||.++|+++.+++.+.+ ++..+|...+ +.....+.++...+
T Consensus 319 ~~tSYDy~Apl~E~G~~t~~ky~elr~l~~~l~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~~~ 397 (971)
T 1tg7_A 319 GYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPG-YLVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSD 397 (971)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCHH-HHTSEECCCBSSSSBSCTTEEEEEEECSSTTSCEEEEEEESS
T ss_pred CCEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHCHH-HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCC
T ss_conf 3005234756076788364689999999999986757-651587667654446787438999434789851899996567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 004677 381 -------------------------------------------------------------------------------- 380 (737)
Q Consensus 381 -------------------------------------------------------------------------------- 380 (737)
T Consensus 398 ~~~~~~~~~~l~v~ts~g~~~iP~~~g~i~l~gr~ski~~~d~~~g~~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~~e 477 (971)
T 1tg7_A 398 YSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHE 477 (971)
T ss_dssp TTCCCCEEECEEEEETTEEEEECSSSSCEEECTTCCEEEEEEEEETTEEEEEESSEEEEEEEETTEEEEEEEECTTCEEE
T ss_pred CCCCCCEEEEEEEECCCCCEECCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCCCCCEE
T ss_conf 87777448999975589877616778736788973089953432487689986200479888789049999848997337
Q ss_pred ------------CCC-E---------EEEECCCCCCEEE-EEECCC-----------CCCCCC-----------------
Q ss_conf ------------641-0---------2320357763007-974583-----------003898-----------------
Q 004677 381 ------------GKC-A---------AFLANYDTTFSAK-VSFGNA-----------QYDLPP----------------- 409 (737)
Q Consensus 381 ------------~~~-~---------~fl~n~~~~~~~~-v~~~~~-----------~~~~~~----------------- 409 (737)
..| . .|+.|+......+ |++.+. .+-.|.
T Consensus 478 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~~~ 557 (971)
T 1tg7_A 478 FAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPGYSNQETTA 557 (971)
T ss_dssp EEEETCCCCEEEESCCTTCEEEEETTEEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCCCCSSSSCCCCCSHHHHH
T ss_pred EEEECCCCEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCEEEEEECHHHHHEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99953762035057665305843685499950468854899979989999645764108655446766667656655678
Q ss_pred -----------CCEEE-------------------C--C-CCCCCCCCCCCCCCCCCCCC-E---EC----C-----CCC
Q ss_conf -----------61010-------------------4--8-86642111320021133320-0---00----0-----144
Q 004677 410 -----------WSISV-------------------L--P-DCKTAVFNTARVGVQSSQKK-F---VP----V-----INA 443 (737)
Q Consensus 410 -----------~sv~i-------------------l--~-~~~~~~~~t~~v~~~~~~~~-~---~~----~-----~~~ 443 (737)
||++| + | +|+.+.||+++|..+.+... + .+ . ...
T Consensus 558 ~~v~v~g~ylvrsasi~~~~l~l~gd~~~~t~~ev~~~p~~~~~v~~Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l~~ 637 (971)
T 1tg7_A 558 SSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVVGAPSGAKNLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKS 637 (971)
T ss_dssp TCCEEECSSEEEEEEEETTEEEEEEEBSSCEEEEEESCCTTCCEEEETTEEECCEECTTCCEEEEECCCCCCCCCCCGGG
T ss_pred CEEEEECCCEEEEEEEECCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 51898667078999980988999852488822799856888668999998840577468618875477765424656677
Q ss_pred CCCCCCCC---CCCCCCCCCCCCCCCHHHHHCC----C----CCCCCE------EEEEEEECCCCCCCCCCCCCCCCEEE
Q ss_conf 45331110---1358899987666731454314----6----888456------99999843789844335899982686
Q 004677 444 FSWQSYIE---ETASSTDDNTFTKDGLWEQVYL----T----ADASDY------LWYMTDVNIDSNEGFLKNGQDPLLTI 506 (737)
Q Consensus 444 ~~~~~~~e---~~~~~~~~~~~~~~~~~Eql~~----T----~d~~Gy------ilYrt~i~~~~~~~~~~~~~~~~L~i 506 (737)
+.|+...| ..+.+++. ..+.....|+.+. | .+.+|| +|||++|..+.++ ..|.+
T Consensus 638 l~Wk~~~~~pe~~~~~dDs-~W~~~~l~~~~n~~~p~t~p~~~~~sdYGf~~G~lwYR~~F~~~~~~--------~~L~~ 708 (971)
T 1tg7_A 638 LKWKSVDTLPEAKNTYDDS-AWTSADHAYTNNSAHSLQTPTSLFASDYGYHTGALLFRGHFTANGKE--------KTFFV 708 (971)
T ss_dssp SCCEEEESCGGGSTTCCCT-TSEECCCSSCCCTTCCCSSSSCCBGGGGTCCSSCEEEEEEEECCSCC--------CEEEE
T ss_pred CCEEEECCCCCCCCCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC--------EEEEE
T ss_conf 8828957784346888877-76589870213434778877667777668667429999899878860--------38999
Q ss_pred C---CCCEEEEEEECCEEEEEEECCCC--CCEEEEEECCCCCC-CCCEEEEEEECCCCCCC---CCCCCCCCCCCCCCEE
Q ss_conf 5---83409999999999999974358--98059950000389-85399999844798665---3476845654325489
Q 004677 507 W---SAGHALQVFINGQLSGTVYGSLE--NPKLTFSKNVKLRP-GVNKISLLSTSVGLPNV---GTHFEKWNAGVLGPVT 577 (737)
Q Consensus 507 ~---~~~d~a~vfvng~~vG~~~~~~~--~~~~~~~~~~~l~~-g~~~L~ILven~Gr~Ny---G~~~~~~~kGI~g~V~ 577 (737)
. ++++.++|||||+++|+..+... ..++.|.+ ..|+. ++|+|+|||+|||+.|+ |.+++++++||. +|.
T Consensus 709 ~~~gG~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~gg~NvI~Vlvdn~G~~nsWy~G~~~~~~~~GI~-~v~ 786 (971)
T 1tg7_A 709 QTKGGTAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQSGKNYVITVVIDNMGLDEDWTIGSEDMKNPRGII-QYS 786 (971)
T ss_dssp EEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEE-EEE
T ss_pred EECCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEEE-EEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCE-EEE
T ss_conf 7157654239999999997655467875567668998-67447995189999936777766566733012687624-889
Q ss_pred ECCCCCCC--CCCCCCEE--EE---------EECCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCEEEEEEEE--CCC
Q ss_conf 85524874--12555702--78---------61572100113434899876434466447--7888449999997--799
Q 004677 578 LKGLNEGT--RDISKQKW--TY---------KIGLKGEALSLHTVSGSSSVEWAQGASLA--QKQPMTWYKTTFN--VPP 640 (737)
Q Consensus 578 l~g~~~~~--~~L~~~~W--~~---------~~gL~gE~~~~~~~~~~~~~~W~~~~~~~--~~~~~t~Yk~~F~--i~~ 640 (737)
|.+.+.+. |+|+++.| .| +.||++|+.+||+|. .++..|++.++.. ...+++|||++|+ +|+
T Consensus 787 L~g~~~~~~~w~l~g~~~ge~~~D~~RgplN~~GL~gE~~~w~~p~-~~~~~W~~~sp~~gl~~~Gv~wyr~~f~L~~p~ 865 (971)
T 1tg7_A 787 LSGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQPQ-PPTQKWDSSSPFTGLTKPGIRFYSTSFDLDLPS 865 (971)
T ss_dssp ETTSCGGGCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHTTTTSSS-CCCTTSBCCCTTTCBSSSEEEEEEEEEECCCCT
T ss_pred EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
T ss_conf 9645798744998505566555543345445444434222532799-983466487876788888508999997456877
Q ss_pred CCC-CEEEECCCCC------EEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-CC
Q ss_conf 999-8189618971------599999881111012698888998888777776643234678998056540585553-47
Q 004677 641 GND-PLALDMGAMG------KGMVWINGQSIGRHWPGYIGNGNCGGCNYAGTYTEKKCRTYCGKPSQRWYHVPRSWL-KP 712 (737)
Q Consensus 641 ~~d-~~~Ld~~g~g------KG~v~VNG~nlGRYW~~~~~~G~~~~~~~~g~~~~~~~~~~~~~PQqtlYhvP~~~L-k~ 712 (737)
+.| |+.|+|.+|+ |+++||||+++||||+. .| ||.++ |||++|| |+
T Consensus 866 g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~---~~----------------------pqr~y-~VP~giLn~~ 919 (971)
T 1tg7_A 866 GYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNN---IG----------------------PQTSF-PVPEGILNYH 919 (971)
T ss_dssp TEECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETT---TC----------------------SCCEE-EECBTTBCTT
T ss_pred CCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEECCC---CC----------------------CCEEE-ECCHHHHCCC
T ss_conf 8983089985788877756328999999987401278---87----------------------87799-7797993869
Q ss_pred CCCEEEE----EEECCCCCCCEEEEEEE
Q ss_conf 8858999----98348998617999972
Q 004677 713 SGNLLVV----FEEWGGEPHWISLLKRT 736 (737)
Q Consensus 713 G~N~Ivi----fEe~g~~p~~i~l~~~~ 736 (737)
|+|+|+| +|+.|++|..|+|+++.
T Consensus 920 G~N~i~vrv~~~~~~Gg~~~~i~l~~~~ 947 (971)
T 1tg7_A 920 GTNWLALSLWAQEDNGAKLDSFELINTT 947 (971)
T ss_dssp SEEEEEEEEEECSTTCBCCSCEEEEECC
T ss_pred CCCEEEEEEECCCCCCCCCCCEEEEECC
T ss_conf 9638999986277778986506999750
No 5
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=1.00 E-value=1 Score=954.03 Aligned_cols=658 Identities=23% Similarity=0.353 Sum_probs=465.8
Q ss_pred CCCCCEEEEECCCCEEECCEEEEEEEEEEECCCCC-CCCHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCHHHH
Q ss_conf 22442038990571999897969999985099999-32279999999987998899800178779978702203603499
Q 004677 32 ISFVKASVSYDHKAVIINGQKRILISGSIHYPRST-PEMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLV 110 (737)
Q Consensus 32 ~~~~~~~v~~d~~~~~idGk~~~~~sG~~Hy~r~~-~~~W~~~l~k~Ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~ 110 (737)
-...++.|++|+++|++||||++++||++||+|+| |++|+|+|+|||++|+|+|++|||||+|||+||+|||+|++||+
T Consensus 19 ~~~~~~~v~~d~~~~~idG~p~~i~sGeiHy~R~p~pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~ 98 (1003)
T 3og2_A 19 KGPLQNIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLE 98 (1003)
T ss_dssp CSCSSSSEEECSSCEEETTEEECEEEEEECGGGCCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSH
T ss_pred CCCCCCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHH
T ss_conf 46776169981886999997989999988875599889999999999973998899851644348978873555555599
Q ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 99999998396999404940011018899880623379927506985579999999999999987133331379854950
Q 004677 111 RFIKLVQQAGLYVHLRIGPYVCAEWNYGGFPVWLKYVPGIEFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILS 190 (737)
Q Consensus 111 ~fl~la~~~GL~vilr~GPyi~aEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~~~~~~gGpII~~ 190 (737)
+||++|+++||+|||||||||||||++||+|.||.+.|+ ++|++||.|++++++|+++|+++++ +++++|||||||+
T Consensus 99 ~fl~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~~~~-~lRt~~p~yl~~~~~~~~~l~~~~~--~~~~~~GGpII~~ 175 (1003)
T 3og2_A 99 PFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG-KLRTDAPDYLHATDNYVAHIASIIA--KAQITNGGPVILY 175 (1003)
T ss_dssp HHHHHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGGCCS-CTTSCCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEE
T ss_pred HHHHHHHHCCCEEEECCCCCEEEECCCCCCCCHHCCCCC-EECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEE
T ss_conf 999999985998993278633335278876621025997-0057998999999999999999987--7642379978999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCC----CCCCCCCC---------CCCCCCCC-------
Q ss_conf 55446678666789332999999999987169985527605889----99863227---------78864354-------
Q 004677 191 QIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDD----APDPVINT---------CNGFYCEK------- 250 (737)
Q Consensus 191 QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~----~~~~~i~~---------~~g~~~~~------- 250 (737)
|||||||++...++.++++||+||++++++.|++|||+||++.. .++.++.+ +++++|+.
T Consensus 176 QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w~~~ 255 (1003)
T 3og2_A 176 QPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDN 255 (1003)
T ss_dssp EESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCCBSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCCCTT
T ss_pred ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 72454575334456777899999999999749936799768852246577765551333024566674303687655555
Q ss_pred ---------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-----HHHHHHCCEEEEEEEECCCCCCCCCCC
Q ss_conf ---------477999998524323332355659999889967899999-----999980980545421014879898898
Q 004677 251 ---------FVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSV-----ARFIQSGGSFINYYMYHGGTNFGRTSG 316 (737)
Q Consensus 251 ---------~~~~~p~~P~~~tE~~~Gwf~~wG~~~~~~~~~~~~~~~-----~~~l~~g~s~~n~YM~hGGTNfG~~~g 316 (737)
+.+.+|++|+|++|||+||||+||++++++++++++..+ +++++.|+|++||||||||||||+|++
T Consensus 256 ~~~~~~~~~~~~~~p~~P~~~~Ef~~GWfd~WG~~~~~~~~~~~~~~~~~~~~~~~l~~G~s~vN~YM~hGGTNFG~~~~ 335 (1003)
T 3og2_A 256 GLPTTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLGH 335 (1003)
T ss_dssp CSCCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHSSHHHHHHHHHHHHHTTCSEEEEEEEECCBCCTTCBC
T ss_pred CCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
T ss_conf 41577998765128999828870014333435888777773340599999999998856885578887216468653579
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCCCCCEEEECC--CCCCCEEEEECCC
Q ss_conf 97422466889878679989512799999999987404876689983235---898642157236--8764102320357
Q 004677 317 GFVATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVKS---LGKNQEAHVFNS--KSGKCAAFLANYD 391 (737)
Q Consensus 317 ~~~~TSYDYdApi~E~G~~~t~Ky~~lr~l~~~~~~~~~~l~~~~p~~~~---~~~~~~~~~~~~--~~~~~~~fl~n~~ 391 (737)
+.++|||||||||+|+|+++||||.++|.+|.|++. .+.++..+|...+ +.+...+.++.. +....+.|+.+.+
T Consensus 336 ~~~~TSYDYdAPL~E~G~~~t~Ky~~lK~l~~fl~~-~~~~l~~~~~~~~~~~~~~~~~i~~t~lr~~~~~~Fyvvrh~~ 414 (1003)
T 3og2_A 336 PGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKV-SPGYITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRHAN 414 (1003)
T ss_dssp TTSCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHT-CTHHHHSEECCCBSSSSSSCSSEEEEEEECSSSCEEEEEEESS
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC
T ss_conf 984133467884464677583478999999998753-8376455646588761348986389998648985599998157
Q ss_pred --C--CCE--EEEEECCCCCCCCC---------CCEEECCC-----CCCC------------------------------
Q ss_conf --7--630--07974583003898---------61010488-----6642------------------------------
Q 004677 392 --T--TFS--AKVSFGNAQYDLPP---------WSISVLPD-----CKTA------------------------------ 421 (737)
Q Consensus 392 --~--~~~--~~v~~~~~~~~~~~---------~sv~il~~-----~~~~------------------------------ 421 (737)
. ... .+|......+++|. +...|++- ...+
T Consensus 415 ~~s~~~~~~~l~l~ts~G~~tiP~~~g~ltL~grdskI~vtdy~~g~~~L~YSTAevlT~~~~~~~~vlvlyg~~Ge~~E 494 (1003)
T 3og2_A 415 YSSTDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQELHE 494 (1003)
T ss_dssp TTCCSCEEECEEECCTTCCEEECTTSCCEEECTTCEEEEEEEEEETTEEEEEESSEEEEEEECSSCEEEEEEECTTCEEE
T ss_pred CCCCCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCEEEEEEECCCCCCEE
T ss_conf 88777612899942788767867889727888865559850132488489997241178899899889999788998348
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 004677 422 -------------------------------------------------------------------------------- 421 (737)
Q Consensus 422 -------------------------------------------------------------------------------- 421 (737)
T Consensus 495 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~l~v~l~dr~~A~~~W~~~~~~~~~~~~~~~ 574 (1003)
T 3og2_A 495 FAVKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSLVIYMVDRNSAYNYWVPTLPGSGKQSAYGS 574 (1003)
T ss_dssp EEESCCSTTCSSCCCEEEECSSCEEEECTTCCEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCBCCCSSTTGGGCS
T ss_pred EEEECCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99933444456788736427870587468958999885379649999799999997068876413553468876454345
Q ss_pred --------------CCCCCC-----------CCCCCCCCCE-------------E-------------------------
Q ss_conf --------------111320-----------0211333200-------------0-------------------------
Q 004677 422 --------------VFNTAR-----------VGVQSSQKKF-------------V------------------------- 438 (737)
Q Consensus 422 --------------~~~t~~-----------v~~~~~~~~~-------------~------------------------- 438 (737)
+..++. +...+....+ +
T Consensus 575 ~~~~~~~vlV~g~yLvRsA~~~g~~l~l~GD~~~tt~lev~~~p~~v~~v~wNG~~~~~~~~~~g~~~~~~~~~~~~i~l 654 (1003)
T 3og2_A 575 SLMNPDSVIINGGYLIRSVAIKGNALSVQADFNVTTPLEIIGIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHVQV 654 (1003)
T ss_dssp CSSSCCBCEEECCSEEEEEEEETTEEEEEEEBSSCCCEEEESCCTTCCEEEETTEEECCEECTTSCEEECCCCCCCCCCC
T ss_pred CCCCCCCEEEECCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEEECCCCCCCCC
T ss_conf 67888728997883799989719999998435898137999368775489999998514863787579983277876548
Q ss_pred CCCCCCCCC---CCCCCCCCCCCC--------------CCCCCCC--HHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCC
Q ss_conf 001444533---111013588999--------------8766673--145431468884569999984378984433589
Q 004677 439 PVINAFSWQ---SYIEETASSTDD--------------NTFTKDG--LWEQVYLTADASDYLWYMTDVNIDSNEGFLKNG 499 (737)
Q Consensus 439 ~~~~~~~~~---~~~e~~~~~~~~--------------~~~~~~~--~~Eql~~T~d~~GyilYrt~i~~~~~~~~~~~~ 499 (737)
|..+.+.|. .+||..+.+++. .|++.+. ...++++ ++|.+|||++|+.+..+.
T Consensus 655 P~L~~l~Wk~~dslPE~~~~ydDs~W~~A~~~~t~n~~~p~~~p~~Lya~dYGf---h~G~~wYRG~F~a~~~~~----- 726 (1003)
T 3og2_A 655 PELTKLKWYKVDSLPEIRSNYDDSRWPLANLRTSNNTYAPLKTPVSLYGSDYGF---HAGTLLFRGRFTARTARQ----- 726 (1003)
T ss_dssp CCGGGSCCEEEESCGGGSTTCCCTTSCBCCCSCCCCSSSCCCSSSCCBGGGGTC---CSSCEEEEEEEECSSSSE-----
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCC---CCCCEEEEEEEECCCCCE-----
T ss_conf 877888714227886568999843260667656568556789984757645676---448789861897788714-----
Q ss_pred CCCCEEECC-CCEEEEEEECCEEEEEEECCCCC--CEEEEEECCCCCCC-CCEEEEEEECCCCC-CC--CCCCCCCCCCC
Q ss_conf 998268658-34099999999999999743589--80599500003898-53999998447986-65--34768456543
Q 004677 500 QDPLLTIWS-AGHALQVFINGQLSGTVYGSLEN--PKLTFSKNVKLRPG-VNKISLLSTSVGLP-NV--GTHFEKWNAGV 572 (737)
Q Consensus 500 ~~~~L~i~~-~~d~a~vfvng~~vG~~~~~~~~--~~~~~~~~~~l~~g-~~~L~ILven~Gr~-Ny--G~~~~~~~kGI 572 (737)
...|.+.+ .+-.+.|||||+|+|+..+.... .+++|.+| .|+.| +|+|+|+|+|||+. ++ |....+.||||
T Consensus 727 -~v~L~~~GG~af~~sVWLNG~flGs~~g~g~~~~~~~~~~lP-~L~~g~~NVLtV~vDn~G~d~~w~~G~d~~k~PRGi 804 (1003)
T 3og2_A 727 -QLFLSTQGGSAFASSVWLNDRFIGSFTGFDAASAANSSYTLD-RLVRGRRYILTVVVDSTGLDENWTTGDDSMKAPRGI 804 (1003)
T ss_dssp -EEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEEC-SCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEE
T ss_pred -EEEEEECCCCCCCCEEEECCEEECCCCCCCCCCCCCEEEECC-CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf -899998151243448999997822554788656566699787-556799608999992887655646675544488750
Q ss_pred CCCEEECCCCCCCCCCCCCEEEEE------------------ECCCCCCCCCCCCCCCCCCCCCCC--------CCCC--
Q ss_conf 254898552487412555702786------------------157210011343489987643446--------6447--
Q 004677 573 LGPVTLKGLNEGTRDISKQKWTYK------------------IGLKGEALSLHTVSGSSSVEWAQG--------ASLA-- 624 (737)
Q Consensus 573 ~g~V~l~g~~~~~~~L~~~~W~~~------------------~gL~gE~~~~~~~~~~~~~~W~~~--------~~~~-- 624 (737)
++ .+|.+....... -.|+.+ .||++||.|||+|+ .++..|++. ++..
T Consensus 805 ~~-~~l~g~~~~~~~---~~Wki~Gn~GGe~~~D~vRGplNeGGly~ER~GwHLPg-~~~~~W~~~~~~~~~~~sp~~g~ 879 (1003)
T 3og2_A 805 LD-YALTSSSGANVS---ISWKLTGNLGGEDYRDVFRGPLNEGGLFFERQGFHLPS-PPLSDFTHGPSSSSSSSSPLDGI 879 (1003)
T ss_dssp EE-EEEEETTSCBCC---CEEEEESSTTTTSCSCTTTCSSSCCSSHHHHHTTTSSS-CCGGGSBCCCTTSTTCCCTTTCB
T ss_pred EE-EECCCCCCCCCC---CEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 00-052378877663---05898413588656786656655886557741323898-89432332444544567845577
Q ss_pred CCCCCEEEEEEEECCCC---CC-CEEEEC---C-C-CCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78884499999977999---99-818961---8-9-71599999881111012698888998888777776643234678
Q 004677 625 QKQPMTWYKTTFNVPPG---ND-PLALDM---G-A-MGKGMVWINGQSIGRHWPGYIGNGNCGGCNYAGTYTEKKCRTYC 695 (737)
Q Consensus 625 ~~~~~t~Yk~~F~i~~~---~d-~~~Ld~---~-g-~gKG~v~VNG~nlGRYW~~~~~~G~~~~~~~~g~~~~~~~~~~~ 695 (737)
...+++||||+|+++-+ .| |+.+.+ + . -.|.++||||+|+|||.+. +|
T Consensus 880 ~~~Gv~fyrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv~~---iG-------------------- 936 (1003)
T 3og2_A 880 AHAGIAFYAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGKYVSN---IG-------------------- 936 (1003)
T ss_dssp SSSEEEEEEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEEEETT---TC--------------------
T ss_pred CCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECEEEEEECCC---CC--------------------
T ss_conf 8884579987852689965671038999777988763589999702021022178---78--------------------
Q ss_pred CCCCEEEEECCCCCCC-CCCCEEEE----EEECCCCCCCEEEEE
Q ss_conf 9980565405855534-78858999----983489986179999
Q 004677 696 GKPSQRWYHVPRSWLK-PSGNLLVV----FEEWGGEPHWISLLK 734 (737)
Q Consensus 696 ~~PQqtlYhvP~~~Lk-~G~N~Ivi----fEe~g~~p~~i~l~~ 734 (737)
||.++. ||.++|+ .|+|+|+| +|+.|+.+..++|+.
T Consensus 937 --PQt~Fp-vP~GILn~~G~NtialalWa~~~~ga~~~~~~L~~ 977 (1003)
T 3og2_A 937 --PQTEFP-VPEGILDYNGDNWIGVALWALESRGAKVPGLALKS 977 (1003)
T ss_dssp --CCCEEE-ECBTTBCTEEEEEEEEEEEECSTTCBCCSCEEEEE
T ss_pred --CCCEEC-CCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEE
T ss_conf --860305-99201127996269999984268888777159997
No 6
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=1.00 E-value=1 Score=301.72 Aligned_cols=156 Identities=17% Similarity=0.291 Sum_probs=138.4
Q ss_pred CEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCHHHHHHHHH
Q ss_conf 20389905719998979699999850999993227999999998799889980017877997870220360349999999
Q 004677 36 KASVSYDHKAVIINGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPTQGNYYFQDRYDLVRFIKL 115 (737)
Q Consensus 36 ~~~v~~d~~~~~idGk~~~~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~l 115 (737)
...++.++++|++||||++++||++|+++..++.+++++++||++|+|+|++||+|+.|||+||+|||+ .|++|+++
T Consensus 41 ~~~i~~~~~~f~lnGkPf~i~gg~~H~~~~y~r~~~~~W~~mKa~G~NtVr~~V~W~~hEP~~G~yDF~---~LD~~ldl 117 (552)
T 3u7v_A 41 QLVTKDGRHALMVDGAPFLMLAAQVNNSSAWPSQMAKVWPAIEKVGANTVQVPIAWEQIEPVEGQFDFS---YLDLLLEQ 117 (552)
T ss_dssp EEEEETTEEEEEETTEEECEEEEECCTTCCSGGGHHHHHHHHHHHTCSEEEEEEEHHHHCSBTTBCCCH---HHHHHHHH
T ss_pred EEEEECCEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCHH---HHHHHHHH
T ss_conf 299978968898999899999887079888633119999999980998899986243248989846806---49999999
Q ss_pred HHHCCCEEEEECCCCCCCCCCCCC---CCEEECCCCCE--EEECCC-----------HHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 998396999404940011018899---88062337992--750698-----------55799999999999999871333
Q 004677 116 VQQAGLYVHLRIGPYVCAEWNYGG---FPVWLKYVPGI--EFRTDN-----------GPFKAAMHKFTEKIVSMMKAEKL 179 (737)
Q Consensus 116 a~~~GL~vilr~GPyi~aEw~~GG---~P~WL~~~p~~--~~Rt~d-----------~~y~~~~~~~~~~i~~~i~~~~~ 179 (737)
|+++||+||+| ||+||++|| +|.||.++|++ ++|+.| +.|++++++|+++|+++++ +.
T Consensus 118 a~e~GL~VIL~----i~aeW~~ggta~~P~WL~~d~~~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La--~r 191 (552)
T 3u7v_A 118 ARERKVRLVLL----WFGTWKNSSPSYAPEWVKLDDKRFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLK--AK 191 (552)
T ss_dssp HHHTTCEEEEE----EEEEEETTBCTTSCHHHHTCTTTSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHH--HH
T ss_pred HHHCCCEEEEE----ECCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH--HH
T ss_conf 99879999998----4120146887678805651766575248899967514798867899999999999999999--97
Q ss_pred CCCCCCCEEEECCCCCCCCCCC
Q ss_conf 3137985495055446678666
Q 004677 180 FQTQGGPIILSQIENEFGPVEW 201 (737)
Q Consensus 180 ~~~~gGpII~~QiENEyg~~~~ 201 (737)
+ .+||||||||||||||++..
T Consensus 192 ~-~~~p~VI~wQIeNEyG~~g~ 212 (552)
T 3u7v_A 192 D-AAQKTVIMVQVENETGTYGS 212 (552)
T ss_dssp H-TTTCCEEEEEEEESCSBSSC
T ss_pred H-CCCCCEEEEEECCCCCCCCC
T ss_conf 1-89994899996156777777
No 7
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=1.00 E-value=1 Score=210.31 Aligned_cols=240 Identities=12% Similarity=0.093 Sum_probs=156.4
Q ss_pred EEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECEECCCCCCC-CCEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 79699999850999993227999999998799889980017877997-87022036034999999999839699940494
Q 004677 51 QKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPT-QGNYYFQDRYDLVRFIKLVQQAGLYVHLRIGP 129 (737)
Q Consensus 51 k~~~~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~~dl~~fl~la~~~GL~vilr~GP 129 (737)
..+.++.++.+....+++.|++++++||++|+|+|+++|.|+.|||+ ||+|||+ .++++|++|+++||+||+++++
T Consensus 12 ~~~vmlp~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~---~~d~~id~a~~~GL~viv~L~~ 88 (516)
T 1vem_A 12 KAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFS---YAQRFAQSVKNAGMKMIPIIST 88 (516)
T ss_dssp EEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCH---HHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEEECC
T ss_conf 7499805655289999999999999999739999998423454138899936369---9999999999779989999311
Q ss_pred CCCCC----CCCCCCCEEECCC-C--CEEEECCC----HHH-----HHHHHHHHHHHHHHHHHCCCCCCCCCCEEE----
Q ss_conf 00110----1889988062337-9--92750698----557-----999999999999998713333137985495----
Q 004677 130 YVCAE----WNYGGFPVWLKYV-P--GIEFRTDN----GPF-----KAAMHKFTEKIVSMMKAEKLFQTQGGPIIL---- 189 (737)
Q Consensus 130 yi~aE----w~~GG~P~WL~~~-p--~~~~Rt~d----~~y-----~~~~~~~~~~i~~~i~~~~~~~~~gGpII~---- 189 (737)
|+|++ |.++++|.||.+. | ++..+..+ +.+ -......++++++.++ +.+ .+.++||+
T Consensus 89 h~c~g~~g~~~~~~lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la--~r~-~~~~~vI~eI~v 165 (516)
T 1vem_A 89 HQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFA--AAM-KPYKDVIAKIYL 165 (516)
T ss_dssp SCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHH--HHT-GGGGGGBCCEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HHH-CCCCCEEEEEEC
T ss_conf 01377767787789997787259964326688999898453542346763899999999999--997-438998999622
Q ss_pred ------------ECCCCCCCCCCC----CCCC-CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------------055446678666----7893-32999999999987169985527605889998632277886435447
Q 004677 190 ------------SQIENEFGPVEW----DIGA-PGKAYAKWAAQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFYCEKFV 252 (737)
Q Consensus 190 ------------~QiENEyg~~~~----~~~~-~~~~y~~~l~~~~~~~g~~vp~~~~~~~~~~~~~i~~~~g~~~~~~~ 252 (737)
+|+|||||+++. .|+. +...+.+|+++++. +++-. +..+ .+ . ..+|.
T Consensus 166 glG~~GelryPs~qv~NE~g~~g~~~~~~y~~~~~~~fr~~l~~~yg----tl~~l-n~aW-------g~--~--~~~~~ 229 (516)
T 1vem_A 166 SGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYG----SLNEV-NKAW-------GT--K--LISEL 229 (516)
T ss_dssp CCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHS----SHHHH-HHHH-------TC--C--CSSGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCC----CHHHH-HHHH-------CC--C--CCCHH
T ss_conf 45534543565543335767877654200489999999999998628----77778-8976-------87--9--78898
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCE------EEEEEEECCCCCCCCC
Q ss_conf 79-99998524323332355659999889967899999999980980------5454210148798988
Q 004677 253 PN-QNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGS------FINYYMYHGGTNFGRT 314 (737)
Q Consensus 253 ~~-~p~~P~~~tE~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s------~~n~YM~hGGTNfG~~ 314 (737)
.. .|..+ .+++++||+++||.....-.++.++..+.++++.+.+ .+.+..--.|.+|-+.
T Consensus 230 ~i~~P~~~--~~~~~~gw~s~~~~df~~f~s~~l~~~~~~~l~~a~~~f~~~~~~~~~~kv~g~hw~y~ 296 (516)
T 1vem_A 230 AILPPSDG--EQFLMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYN 296 (516)
T ss_dssp GCCSCSCH--HHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTT
T ss_pred HHCCCCCC--CCCCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCC
T ss_conf 82786556--54357983366507298856378999999999987875488768428998474201688
No 8
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=1.00 E-value=1 Score=210.11 Aligned_cols=284 Identities=16% Similarity=0.228 Sum_probs=191.1
Q ss_pred EEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECE-ECCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 96999998509999932279999999987998899800-17877997870220360349999999998396999404940
Q 004677 52 KRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYV-FWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRIGPY 130 (737)
Q Consensus 52 ~~~~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~~yv-~Wn~hEp~~G~~df~g~~dl~~fl~la~~~GL~vilr~GPy 130 (737)
+.+++||++|+.+++++.|++++++||++|+|+|++++ .|+.+||++|+|||+ +|++++++|+++||.||++++++
T Consensus 7 ~~~~~G~~y~pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~f~---~ld~~i~~~~~~Gi~vil~~~~~ 83 (675)
T 3tty_A 7 PKIWYGGDYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFT---WLDDIIERLTKENIYLCLATSTG 83 (675)
T ss_dssp CSCEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBCCH---HHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCHH---HHHHHHHHHHHCCCEEEEECCCC
T ss_conf 876570057916499899999999999739988999411244218769863889---99999999998799999967877
Q ss_pred CCCCCCCCCCCEEECCCC-CE--------EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 011018899880623379-92--------750698557999999999999998713333137985495055446678666
Q 004677 131 VCAEWNYGGFPVWLKYVP-GI--------EFRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIENEFGPVEW 201 (737)
Q Consensus 131 i~aEw~~GG~P~WL~~~p-~~--------~~Rt~d~~y~~~~~~~~~~i~~~i~~~~~~~~~gGpII~~QiENEyg~~~~ 201 (737)
.+.+|-....|.|+.... +. ....++|.|++++.+++++++++++ ++++||+|||+||++++..
T Consensus 84 ~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~-------~~p~Vi~w~v~NE~g~~~y 156 (675)
T 3tty_A 84 AHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYK-------DHPQIVMWHVSNEYGGYCY 156 (675)
T ss_dssp SCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTT-------TCTTEEEEECSSSCCCCCC
T ss_pred CCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-------CCCCEEEEEECCCCCCCCC
T ss_conf 787334433875156668996803687567899999999999999999999738-------8996899997566678768
Q ss_pred CCCCCHHHHHHHHHHHHHHC-------CC-------------CCCEE---------EECCC---C---------------
Q ss_conf 78933299999999998716-------99-------------85527---------60588---9---------------
Q 004677 202 DIGAPGKAYAKWAAQMAVGL-------NT-------------GVPWV---------MCKQD---D--------------- 234 (737)
Q Consensus 202 ~~~~~~~~y~~~l~~~~~~~-------g~-------------~vp~~---------~~~~~---~--------------- 234 (737)
+..|.++|.+||++++... |. ..|-. ..... +
T Consensus 157 -~~~~~~~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y~~w~ei~~P~~~~~~~~~~~~~~p~~~lD~~rF~~~~~~~~~~~ 235 (675)
T 3tty_A 157 -CDNCEKQFRVWLKERYGTLEALNKAWNTSFWSHTFYDWDEIVAPNALSEEWSGNRTNFQGISLDYRRFQSDSLLECFKM 235 (675)
T ss_dssp -SHHHHHHHHHHHHHHHSSHHHHHHHTTTTGGGCCCSSGGGCCCCSTTTTEETTTEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf -9899999999999886579999998675523575577987169856565544456678589999999999999999999
Q ss_pred --------CCCCCCCCCCC------CC------------CCCC-----------------CCCCCCCCCCCCCCCCCCCC
Q ss_conf --------99863227788------64------------3544-----------------77999998524323332355
Q 004677 235 --------APDPVINTCNG------FY------------CEKF-----------------VPNQNYKPKMWTEAWTGWFT 271 (737)
Q Consensus 235 --------~~~~~i~~~~g------~~------------~~~~-----------------~~~~p~~P~~~tE~~~Gwf~ 271 (737)
.|+ ..-|.|. .+ +|.+ +...+.+|.+.+|.++| ..
T Consensus 236 ~~d~iR~~~P~-~pvt~N~~~~~~~~D~~~~a~~~Dvvs~D~Yp~~~~~~~~~a~~~dl~R~~~~g~p~~~mE~~~~-~~ 313 (675)
T 3tty_A 236 ERDELKRWTPD-IPVTTNLMGFYPELDYFKWAKEMDVVSWDNYPSMDTPFSFTAMAHNLMRGLKSGQPFMLMEQTPG-VQ 313 (675)
T ss_dssp HHHHHHHHCTT-SCEECEECTTCTTSCHHHHHTTCSSCEEECCCCTTSCHHHHHHHHHHHHHTTTTCCEEEEECCSS-CC
T ss_pred HHHHHHHHCCC-CCEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-CC
T ss_conf 99999975899-87797626566776999996159899977888867888899989988876047998699657778-88
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 65999988996789999999998098054542101487989889897422466889878679989512799999999987
Q 004677 272 EFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHGGTNFGRTSGGFVATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIK 351 (737)
Q Consensus 272 ~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~g~~~~TSYDYdApi~E~G~~~t~Ky~~lr~l~~~~~ 351 (737)
.|..-.....+..+.......++.|+..+.|+-++...+ | .-.| -.|.|+-+|.+.++.|.+++++...++
T Consensus 314 ~w~~~~~~~~pg~~r~~~~~~~A~Ga~~v~~f~wr~~~~-g-------~E~~-h~g~~~~~g~~~~r~~~ev~~~~~~l~ 384 (675)
T 3tty_A 314 NWQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSVG-A-------CEKY-HGAVIEHVGHEHTRVFRECAELGKELQ 384 (675)
T ss_dssp TTSSBCCCCCTTHHHHHHHHHHHTTEEEEEESCSBCCCS-G-------GGTT-SCCSBCTTCSSCSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC-C-------HHHH-HCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 885778889950999999999856257676341168888-5-------5665-026458789988469999999999999
Q ss_pred HHCCCC
Q ss_conf 404876
Q 004677 352 LCEPAL 357 (737)
Q Consensus 352 ~~~~~l 357 (737)
..++.+
T Consensus 385 ~l~~~~ 390 (675)
T 3tty_A 385 QLGDTI 390 (675)
T ss_dssp HHTTTT
T ss_pred HHHHHH
T ss_conf 756664
No 9
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=1.00 E-value=1 Score=204.12 Aligned_cols=271 Identities=12% Similarity=0.128 Sum_probs=186.2
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECE-ECCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 99998509999932279999999987998899800-17877997870220360349999999998396999404940011
Q 004677 55 LISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYV-FWNGHEPTQGNYYFQDRYDLVRFIKLVQQAGLYVHLRIGPYVCA 133 (737)
Q Consensus 55 ~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~~yv-~Wn~hEp~~G~~df~g~~dl~~fl~la~~~GL~vilr~GPyi~a 133 (737)
++++++|+.+++++.|++++++||++|+|+|++++ .|+.+||+||+|||+ +|++++++|+++||+||+++..
T Consensus 1 ~~G~~y~pe~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~d~~---~ld~~ld~a~~~Gi~vil~~~~---- 73 (645)
T 1kwg_A 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIATLAAEGLKVVLGTPT---- 73 (645)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCH---HHHHHHHHHHTTTCEEEEECST----
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEECCC----
T ss_conf 977767966589789999999999829988999245142048889945869---9999999999789989995898----
Q ss_pred CCCCCCCCEEECC-CCCEE----------------EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
Q ss_conf 0188998806233-79927----------------506985579999999999999987133331379854950554466
Q 004677 134 EWNYGGFPVWLKY-VPGIE----------------FRTDNGPFKAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIENEF 196 (737)
Q Consensus 134 Ew~~GG~P~WL~~-~p~~~----------------~Rt~d~~y~~~~~~~~~~i~~~i~~~~~~~~~gGpII~~QiENEy 196 (737)
+++|.|+.+ .|+.. ...+++.|++++++++++++++++ +++.|++|||+||+
T Consensus 74 ----~~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~-------~~p~V~~w~i~NE~ 142 (645)
T 1kwg_A 74 ----ATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYG-------GLEAVAGFQTDNEY 142 (645)
T ss_dssp ----TSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHT-------TCTTEEEEECSSST
T ss_pred ----CCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-------CCCCEEEEEECCCC
T ss_conf ----8898567625985266679986766676456799999999999999999999859-------99818999936867
Q ss_pred CCCC--CCCC-CCHHHHH--------------------------------------------------------------
Q ss_conf 7866--6789-3329999--------------------------------------------------------------
Q 004677 197 GPVE--WDIG-APGKAYA-------------------------------------------------------------- 211 (737)
Q Consensus 197 g~~~--~~~~-~~~~~y~-------------------------------------------------------------- 211 (737)
+... ..|+ .+..+|.
T Consensus 143 ~~~~~~~~y~~~~~~~f~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~~ 222 (645)
T 1kwg_A 143 GCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFN 222 (645)
T ss_dssp TTTTTSCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 77878886899999999999998866999999875745234555768554898766777884788889999999999999
Q ss_pred HHHHHHHHHCCCCCCEEEECCCC--CCC-----CCCCCCCC-CCCC---C-----------CC-CCC-------------
Q ss_conf 99999987169985527605889--998-----63227788-6435---4-----------47-799-------------
Q 004677 212 KWAAQMAVGLNTGVPWVMCKQDD--APD-----PVINTCNG-FYCE---K-----------FV-PNQ------------- 255 (737)
Q Consensus 212 ~~l~~~~~~~g~~vp~~~~~~~~--~~~-----~~i~~~~g-~~~~---~-----------~~-~~~------------- 255 (737)
+++.+..++.+.++|..++.... ..+ +.++.... .|.. . |. ...
T Consensus 223 ~~~~~~ir~~~p~~pvt~n~~~~~~~~d~~~~a~~lDv~~~d~Y~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~dl~r~ 302 (645)
T 1kwg_A 223 RLQVEILRAHAPGKFVTHNFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRG 302 (645)
T ss_dssp HHHHHHHHHHSTTCEEECEECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999868998579847767777689998744959997778864444333333211123456755677777778876
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -9998524323332355659999889967899999999980980545421014879898898974224668898786799
Q 004677 256 -NYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHGGTNFGRTSGGFVATSYDYDAPIDEYGL 334 (737)
Q Consensus 256 -p~~P~~~tE~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~g~~~~TSYDYdApi~E~G~ 334 (737)
..+|.+.+|+.+|..+ |+.......+..+.......++.|+..++|+-+. .......+|+++ .|+++|.
T Consensus 303 ~~~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~Ga~~~~~f~w~--------~~~~~~E~~~~g-~l~~~g~ 372 (645)
T 1kwg_A 303 VGRGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRWR--------QAPFAQEQMHAG-LHRPDSA 372 (645)
T ss_dssp HTTTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSB--------CCSSSTTTTSCC-SBCTTSC
T ss_pred HCCCCEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC--------CCCCCCCCCCCC-CCCCCCC
T ss_conf 05998798568888888-7667888993099999999985578778886312--------689971014434-3387899
Q ss_pred CCCHHHHHHHHHHHHHHHHC
Q ss_conf 89512799999999987404
Q 004677 335 LNEPKWGHLRDLHKAIKLCE 354 (737)
Q Consensus 335 ~~t~Ky~~lr~l~~~~~~~~ 354 (737)
+ +++|.+++++...++..+
T Consensus 373 ~-~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 373 P-DQGFFEAKRVAEELAALA 391 (645)
T ss_dssp B-CHHHHHHHHHHHHHHTCC
T ss_pred C-CHHHHHHHHHHHHHHHHC
T ss_conf 2-889999999999998633
No 10
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=1.00 E-value=1 Score=171.38 Aligned_cols=182 Identities=15% Similarity=0.276 Sum_probs=138.3
Q ss_pred ECCCCEEECCEEEEEEEEEEECCCC-CCCCHHHHHHHHHHCCCCEEEECEEC----------CCCCCCCCEEE-------
Q ss_conf 9057199989796999998509999-93227999999998799889980017----------87799787022-------
Q 004677 41 YDHKAVIINGQKRILISGSIHYPRS-TPEMWPDLIQKAKDGGLDVIQTYVFW----------NGHEPTQGNYY------- 102 (737)
Q Consensus 41 ~d~~~~~idGk~~~~~sG~~Hy~r~-~~~~W~~~l~k~Ka~G~N~V~~yv~W----------n~hEp~~G~~d------- 102 (737)
.++..|.+||||+.+.|..+||.+. +++.|++.|+.||++|+|+||+++|| ..+||.+|+||
T Consensus 15 ~~g~~F~ldGkp~~f~G~N~y~~~~~~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~ 94 (383)
T 3pzg_A 15 VPRGSHMLNGKEFRFIGSNNYYMHYKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISN 94 (383)
T ss_dssp ------------CCEEEEECSCTTTSCHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSS
T ss_pred CCCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 04998989999999988870245669999999999999976998899701156555566665433667985464334442
Q ss_pred -ECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCC-CCCCCCEEECCCCCE--EEECCCHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf -036034999999999839699940494001101-889988062337992--750698557999999999999998713-
Q 004677 103 -FQDRYDLVRFIKLVQQAGLYVHLRIGPYVCAEW-NYGGFPVWLKYVPGI--EFRTDNGPFKAAMHKFTEKIVSMMKAE- 177 (737)
Q Consensus 103 -f~g~~dl~~fl~la~~~GL~vilr~GPyi~aEw-~~GG~P~WL~~~p~~--~~Rt~d~~y~~~~~~~~~~i~~~i~~~- 177 (737)
.++...|+++|+.|+++||+|||.+ +.+| ..||.|.|+....+. ....+++.++++.+++++.|++++...
T Consensus 95 ~~~~~~~LD~~i~~A~k~GI~viL~l----~~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~t 170 (383)
T 3pzg_A 95 AQNGFERLDYTIAKAKELGIKLIIVL----VNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYT 170 (383)
T ss_dssp CEEHHHHHHHHHHHHHHHTCEEEEEC----CBSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTT
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEC----CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 47899999999999998899899973----66654557864113324898635556899999999999999985535456
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHCCCCCCEEE
Q ss_conf 33313798549505544667866678933299999999---99871699855276
Q 004677 178 KLFQTQGGPIILSQIENEFGPVEWDIGAPGKAYAKWAA---QMAVGLNTGVPWVM 229 (737)
Q Consensus 178 ~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l~---~~~~~~g~~vp~~~ 229 (737)
.+.+++.++|++|||.||+++... .....+.+|++ +..|+.+...|.+.
T Consensus 171 G~~y~~~p~I~~w~l~NEp~~~~~---~~~~~~~~w~~~~~~~IR~~Dp~~lVt~ 222 (383)
T 3pzg_A 171 GVPYREEPTIMAWELANELRCETD---KSGNTLVEWVKEMSSYIKSLDPNHLVAV 222 (383)
T ss_dssp CCBGGGCTTEEEEESCBTCCCTTC---TTSHHHHHHHHHHHHHHHHHCSSSEEEC
T ss_pred CCCCCCCCCEEEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 731079985789995377776667---6479999999999999996589966998
Done!