Query 004678
Match_columns 737
No_of_seqs 174 out of 321
Neff 5.5
Searched_HMMs 13730
Date Tue Mar 26 18:27:16 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004678.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1976-1979//hhsearch_scop/004678hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ppqa_ g.18.1.1 (A:) Compleme 7.8 40 0.0029 9.2 1.1 35 577-611 24-60 (68)
2 d2dexx3 d.126.1.5 (X:294-663) 7.1 45 0.0033 8.9 0.3 23 553-575 187-210 (370)
3 d1quba2 g.18.1.1 (A:63-120) be 5.5 63 0.0046 7.8 1.1 33 578-611 20-52 (58)
4 d1g94a1 b.71.1.1 (A:355-448) B 5.4 65 0.0047 7.7 1.5 27 581-607 2-30 (94)
5 d1jaea1 b.71.1.1 (A:379-471) A 5.3 66 0.0048 7.7 2.3 28 582-609 3-32 (93)
6 d1hx0a1 b.71.1.1 (A:404-496) A 4.6 77 0.0056 7.2 2.2 25 583-607 3-29 (93)
7 d2o39c2 g.18.1.1 (C:63-126) CD 4.4 83 0.0061 7.0 1.2 36 576-611 20-57 (64)
8 d1hcca_ g.18.1.1 (A:) Factor H 3.5 1.1E+02 0.0079 6.2 0.9 30 579-610 25-54 (59)
9 d1h03p1 g.18.1.1 (P:5-66) Comp 3.3 1.2E+02 0.0087 5.9 1.2 24 588-611 31-56 (62)
10 d1op0a_ b.47.1.2 (A:) Venom se 3.2 48 0.0035 8.7 -2.1 18 642-663 1-18 (234)
No 1
>d1ppqa_ g.18.1.1 (A:) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.81 E-value=40 Score=9.23 Aligned_cols=35 Identities=14% Similarity=0.323 Sum_probs=25.3
Q ss_pred CCCCCEEEEECCCCCEEEEECCCEEEECCC--CCCCC
Q ss_conf 999980145024652033403630110498--76620
Q 004678 577 TEVDDKVASWWDYGYQTTAMANRTVIVDNN--TWNNT 611 (737)
Q Consensus 577 Tp~da~VmSWWDYGYqIt~manRttlvDNN--TwN~t 611 (737)
+.-.+++.===|-||++.|.+.|+-+.||+ +|++.
T Consensus 24 ~~~gs~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~ 60 (68)
T d1ppqa_ 24 IQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60 (68)
T ss_dssp SCTTCCCEEEESTTCCBSSCSCCCEEECSSSEEESSC
T ss_pred CCCCCEEEEEECCCCEECCCCCEEEECCCCCCEECCC
T ss_conf 5659999998389968948980798189998979899
No 2
>d2dexx3 d.126.1.5 (X:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.14 E-value=45 Score=8.87 Aligned_cols=23 Identities=13% Similarity=0.271 Sum_probs=12.0
Q ss_pred EECCCCC-CCCCHHHHHHHHHHHH
Q ss_conf 7225888-6443339999999860
Q 004678 553 TSYTHEG-LHVFDDFREAYAWLRH 575 (737)
Q Consensus 553 ~s~~~~G-~~i~DD~rEAy~WLR~ 575 (737)
.+.++.| +...-|=...|.-+|+
T Consensus 187 Pa~~~kgfrlLlAsP~a~~~Ll~~ 210 (370)
T d2dexx3 187 PAPDRKGFRLLLASPRSCYKLFQE 210 (370)
T ss_dssp ECSSGGGEEEEEEEHHHHHHHHHH
T ss_pred ECCCCCCEEEEECCHHHHHHHHHH
T ss_conf 369998538996388999999999
No 3
>d1quba2 g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.47 E-value=63 Score=7.83 Aligned_cols=33 Identities=9% Similarity=0.286 Sum_probs=24.6
Q ss_pred CCCCEEEEECCCCCEEEEECCCEEEECCCCCCCC
Q ss_conf 9998014502465203340363011049876620
Q 004678 578 EVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNT 611 (737)
Q Consensus 578 p~da~VmSWWDYGYqIt~manRttlvDNNTwN~t 611 (737)
.-.++|-=-=|-||.+.|-..|+-. +|.+|++.
T Consensus 20 ~~g~~v~y~C~~Gy~l~G~~~~~C~-~~g~Ws~~ 52 (58)
T d1quba2 20 EYPNTISFSCNTGFYLNGADSAKCT-EEGKWSPE 52 (58)
T ss_dssp BTTCEEEEEECTTEEEESCSEEEEC-TTSCEESC
T ss_pred CCCCEEEEECCCCCEECCCCCEEEC-CCCEECCC
T ss_conf 4699999982999898499995989-99969999
No 4
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=5.36 E-value=65 Score=7.75 Aligned_cols=27 Identities=22% Similarity=0.400 Sum_probs=19.5
Q ss_pred CEEEEECCCC-CEEE-EECCCEEEECCCC
Q ss_conf 8014502465-2033-4036301104987
Q 004678 581 DKVASWWDYG-YQTT-AMANRTVIVDNNT 607 (737)
Q Consensus 581 a~VmSWWDYG-YqIt-~manRttlvDNNT 607 (737)
-.|--|||-| +||+ .-|+|.=++=||.
T Consensus 2 ~~v~nWwdng~nqIAF~RG~kGFvAiN~~ 30 (94)
T d1g94a1 2 WAVTNWWDNTNNQISFGRGSSGHMAINKE 30 (94)
T ss_dssp CCCEEEEECSSSEEEEECGGGEEEEEECS
T ss_pred CEEECCEECCCCEEEEECCCCCEEEEECC
T ss_conf 50333377899579992599748999399
No 5
>d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]}
Probab=5.28 E-value=66 Score=7.69 Aligned_cols=28 Identities=18% Similarity=0.431 Sum_probs=19.6
Q ss_pred EEEEECCCC-CEEE-EECCCEEEECCCCCC
Q ss_conf 014502465-2033-403630110498766
Q 004678 582 KVASWWDYG-YQTT-AMANRTVIVDNNTWN 609 (737)
Q Consensus 582 ~VmSWWDYG-YqIt-~manRttlvDNNTwN 609 (737)
-|--|||-| +||+ .-++|-=++=||..+
T Consensus 3 ~v~nWwdng~nqIAF~RG~kGFvAiN~~~~ 32 (93)
T d1jaea1 3 QVENWWSNDDNQIAFSRGSQGFVAFTNGGD 32 (93)
T ss_dssp CEEEEEECSSSEEEEEETTTEEEEEESSSC
T ss_pred CCCCCEECCCCEEEEECCCCCEEEEECCCC
T ss_conf 424558899957999159973999907824
No 6
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=4.64 E-value=77 Score=7.20 Aligned_cols=25 Identities=48% Similarity=0.812 Sum_probs=19.1
Q ss_pred EEEECCCC-CEEE-EECCCEEEECCCC
Q ss_conf 14502465-2033-4036301104987
Q 004678 583 VASWWDYG-YQTT-AMANRTVIVDNNT 607 (737)
Q Consensus 583 VmSWWDYG-YqIt-~manRttlvDNNT 607 (737)
|--|||-| +||+ .-|+|-=++=||+
T Consensus 3 v~nWwdng~nqIAF~RG~kGFvAiNn~ 29 (93)
T d1hx0a1 3 FANWWDNGSNQVAFGRGNRGFIVFNND 29 (93)
T ss_dssp EEEEEECSSSEEEEEETTTEEEEEECS
T ss_pred CCCEEECCCCEEEEECCCCCEEEEECC
T ss_conf 566285899589991599748999599
No 7
>d2o39c2 g.18.1.1 (C:63-126) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.36 E-value=83 Score=6.97 Aligned_cols=36 Identities=11% Similarity=0.133 Sum_probs=26.1
Q ss_pred CCCCCCEEEEECCCCCEEEEECCCEEEECCC--CCCCC
Q ss_conf 6999980145024652033403630110498--76620
Q 004678 576 NTEVDDKVASWWDYGYQTTAMANRTVIVDNN--TWNNT 611 (737)
Q Consensus 576 NTp~da~VmSWWDYGYqIt~manRttlvDNN--TwN~t 611 (737)
+....++|-=-=|=||++.|-+.|+-+.|++ +|++.
T Consensus 20 ~~~~gs~~~f~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~ 57 (64)
T d2o39c2 20 TYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGK 57 (64)
T ss_dssp CCBSSEEEEEEECTTCEECSCSEEEEEECSSCEEESSC
T ss_pred CCCCCCEEEEECCCCCEECCCCCEEEECCCCCCEECCC
T ss_conf 84369999988899987968995698489997859999
No 8
>d1hcca_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.53 E-value=1.1e+02 Score=6.17 Aligned_cols=30 Identities=13% Similarity=0.236 Sum_probs=20.2
Q ss_pred CCCEEEEECCCCCEEEEECCCEEEECCCCCCC
Q ss_conf 99801450246520334036301104987662
Q 004678 579 VDDKVASWWDYGYQTTAMANRTVIVDNNTWNN 610 (737)
Q Consensus 579 ~da~VmSWWDYGYqIt~manRttlvDNNTwN~ 610 (737)
..+.|.===|=||++.|-+.++-+ |++|+.
T Consensus 25 ~g~~v~y~C~~Gy~l~G~~~~~C~--~g~Ws~ 54 (59)
T d1hcca_ 25 YGEEVTYKCFEGFGIDGPAIAKCL--GEKWSH 54 (59)
T ss_dssp SSCEECEEECTTSCEESCSCEEEE--TTEEEC
T ss_pred CCCEEEEECCCCCEECCCCEEEEC--CCCCCC
T ss_conf 899999888999888599810828--994799
No 9
>d1h03p1 g.18.1.1 (P:5-66) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.27 E-value=1.2e+02 Score=5.89 Aligned_cols=24 Identities=13% Similarity=0.501 Sum_probs=0.0
Q ss_pred CCCCEEEEECCCEEEECCC--CCCCC
Q ss_conf 4652033403630110498--76620
Q 004678 588 DYGYQTTAMANRTVIVDNN--TWNNT 611 (737)
Q Consensus 588 DYGYqIt~manRttlvDNN--TwN~t 611 (737)
|=||++.|-+.|+-+.||+ .|+++
T Consensus 31 ~~Gy~L~G~~~~~C~~~g~~~~Ws~~ 56 (62)
T d1h03p1 31 NTGYKLFGSTSSFCLISGSSVQWSDP 56 (62)
T ss_dssp CTTEEEESCSEEEEEEETTEEEESSC
T ss_pred CCCCEECCCCCEEEECCCCCCEECCC
T ss_conf 99998938992798479995818899
No 10
>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}
Probab=3.21 E-value=48 Score=8.65 Aligned_cols=18 Identities=39% Similarity=0.615 Sum_probs=0.0
Q ss_pred EECCCCCCCCCCHHHHHHHHHH
Q ss_conf 8577667898721356788883
Q 004678 642 VFGGLVGYPSDDINKFLWMVRI 663 (737)
Q Consensus 642 ~fGg~~gysgdDinKf~WMvRI 663 (737)
|+||. --|++.|||||+|
T Consensus 1 i~gG~----~a~~~e~Pw~v~i 18 (234)
T d1op0a_ 1 VIGGN----ECDINEHRFLVAF 18 (234)
T ss_dssp CBSCE----ECCTTSCTTEEEE
T ss_pred CCCCE----ECCCCCCCCEEEE
T ss_conf 99999----9998996808999
Done!