Your job contains 1 sequence.
>004681
MNGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFS
VSQNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPC
VNNSALSSLIKLICPSFEKETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFRE
YITSGEWDNAEKYLSAFTNMNDNTYSAKMFSQIQRQKYLEAVDRQQKLPSDFAERAHLFD
DFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCINVMPNANNETISLKDFPT
VSNLRYASSILTDKPNQEGRPLDASSGDDSNDSSCFNDNNQSRESTSLPDADSAVCAKSL
EKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFLVALTQTATHKLWKWQSN
KQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIFSLE
TFQTLATFANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLA
YSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLL
SIHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLE
LRCQINLTAYAQPGTISLELYPLVIAAHPLEPNRIALGLTNGRVHVIEPLESEVEWGKLP
FTDSREFSTTFGSTALE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004681
(737 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040100 - symbol:AT2G25420 "AT2G25420" species... 887 3.6e-148 2
TAIR|locus:2036204 - symbol:TPL "TOPLESS" species:3702 "A... 836 4.7e-116 2
TAIR|locus:2198888 - symbol:TPR1 "TOPLESS-related 1" spec... 833 2.0e-115 2
TAIR|locus:2086770 - symbol:TPR2 "TOPLESS-related 2" spec... 721 2.9e-102 3
WB|WBGene00004895 - symbol:smu-1 species:6239 "Caenorhabd... 93 1.7e-05 3
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 128 5.1e-05 1
GENEDB_PFALCIPARUM|PFC0365w - symbol:PFC0365w "conserved ... 134 6.9e-05 2
UNIPROTKB|O77325 - symbol:PFC0365w "PRP19-like protein, p... 134 6.9e-05 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 128 8.5e-05 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 119 0.00060 1
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 89 0.00076 2
>TAIR|locus:2040100 [details] [associations]
symbol:AT2G25420 "AT2G25420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010050 "vegetative phase change" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K14558
EMBL:AK226678 IPI:IPI00517803 RefSeq:NP_565594.3 UniGene:At.23385
ProteinModelPortal:Q0WVR3 SMR:Q0WVR3 STRING:Q0WVR3 PRIDE:Q0WVR3
EnsemblPlants:AT2G25420.1 GeneID:817080 KEGG:ath:AT2G25420
TAIR:At2g25420 eggNOG:NOG240498 HOGENOM:HOG000120706
InParanoid:Q0WVR3 OMA:STEWEVA PhylomeDB:Q0WVR3
ProtClustDB:CLSN2920575 Genevestigator:Q0WVR3 Uniprot:Q0WVR3
Length = 740
Score = 887 (317.3 bits), Expect = 3.6e-148, Sum P(2) = 3.6e-148
Identities = 174/363 (47%), Positives = 240/363 (66%)
Query: 371 INEPSECRTLLLPDNSFGGRVVRLIYSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVN 430
I +PS+C L+LPD ++ RL YS SGD+++AL + ATHKLW W S++ +ENV
Sbjct: 372 IKDPSQCNALVLPDCFSEEKIARLTYSPSGDYILALAEDATHKLWTWSSSQNEFCKENVY 431
Query: 431 MESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIFSLETFQTLATFAN 490
+ +L+QP S M N++A + S SCFA++GS+LFS SGGKI++F L+ F+ +A+F +
Sbjct: 432 PKPRLHQPQSGKTMENEMATSVQKSTSCFAVKGSYLFSTSGGKIAVFDLKNFEKVASFGS 491
Query: 491 PPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVS 550
P P+ATYFI +P DL A G DD SI +HC ++K K KL+GH +ITCLA+S NVLVS
Sbjct: 492 PTPMATYFIFIPGDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVS 551
Query: 551 SGADAQLCVWDAVGWKKLCSK-FLHSF-QTGLVPETTIVNHIQFHPDQIHLLSIHEGQID 608
S +D +LC+W W KL SK F + T++V HIQF P QI LL +H+G I
Sbjct: 552 SDSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFDPYQIELLVVHDGWIG 611
Query: 609 VYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLELRCQINLT 668
+YE TL+ Q +PD D IT ATYS DG+ IYV + G +K+ D+ T CQINLT
Sbjct: 612 LYEVRTLDCRLQWIPDASDPAITSATYSSDGEIIYVGFRCGSIKIVDSKTFMTLCQINLT 671
Query: 669 AYAQPGT--ISLELYPLVIAAHPLEPNRIALGLTNGRVHVIEPLESEVEWGKL-PFTDSR 725
++ Q T ISLE+YP V+AAHP PN+I+ GL+NG+V V++PL S WG+ P D+
Sbjct: 672 SFTQLSTSNISLEVYPTVVAAHPSHPNQISAGLSNGKVIVLQPLWSG-GWGEAAPLEDNG 730
Query: 726 EFS 728
++S
Sbjct: 731 DYS 733
Score = 581 (209.6 bits), Expect = 3.6e-148, Sum P(2) = 3.6e-148
Identities = 136/311 (43%), Positives = 190/311 (61%)
Query: 1 MNGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFS 60
+NG W+ A+ YLSAFT + + S+KMFF L K K+ EA R +EA IF KDL+
Sbjct: 49 LNGNWKDADDYLSAFTSPEANTFSRKMFFGLFKLKFSEAPDRSGGSEAVKIFSKDLRRIP 108
Query: 61 VSQNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPC 120
V ++ +L E++A+ D+R E+ A RAKL L L + N L+ KL FP
Sbjct: 109 VLKDDSFDDLVEVIAVDDMRIPEETCCVDKAPG-RAKLCVDLHKLAESNPSLRGKLDFPS 167
Query: 121 VNNSALSSLIKLICPSFEKET---KEELIYLIHQFLNEEEFKETLHKLEQETRVFFDINY 177
+N SAL +LI L+CP+ + KE+LI LI QFL E ++K TLHKLEQET+VFF++NY
Sbjct: 168 LNKSALLALISLLCPNCSRRKGGLKEDLICLILQFLYEAKYKNTLHKLEQETKVFFNLNY 227
Query: 178 FREYITSGEWDNAEKYLSAFTNMNDNTYSAKMFSQIQRQKYLEAVDRQQKLPS----DFA 233
E + GE+ AE+YL AFTN DN YS MF ++Q+ L++ + + PS + +
Sbjct: 228 LAEVMKLGEYGKAEEYLGAFTNWEDNKYSKAMFLELQKLICLQSTEWEVATPSGSLDNMS 287
Query: 234 ERAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCINVMPNANNETI 293
+ L +L ++NP+L+D+LKFPSM+KSRLL+L+KQ MDWW C N T
Sbjct: 288 LKIKLHASVAMLAKKNPVLKDELKFPSMEKSRLLTLVKQTMDWWT--C--------NNTS 337
Query: 294 SLKDFPTVSNL 304
SL++ P VS L
Sbjct: 338 SLENVPVVSYL 348
Score = 211 (79.3 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 48/117 (41%), Positives = 74/117 (63%)
Query: 138 EKETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAF 197
+++ ++ L++LI QF +EE ++E+LH LEQ++ VFFD +Y I +G W +A+ YLSAF
Sbjct: 4 DEKNRKNLVFLILQFFDEEGYEESLHLLEQDSGVFFDFSYLSNAILNGNWKDADDYLSAF 63
Query: 198 TNMNDNTYSAKMFSQIQRQKYLEAVDRQQKLPSDFAERAHLFDDFKVLVERNPMLQD 254
T+ NT+S KMF + + K+ EA DR S +E +F K L R P+L+D
Sbjct: 64 TSPEANTFSRKMFFGLFKLKFSEAPDR-----SGGSEAVKIFS--KDL-RRIPVLKD 112
>TAIR|locus:2036204 [details] [associations]
symbol:TPL "TOPLESS" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010072 "primary shoot apical meristem
specification" evidence=IGI;IMP] [GO:0009733 "response to auxin
stimulus" evidence=IPI] [GO:0010051 "xylem and phloem pattern
formation" evidence=IGI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0009733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0010072 GO:GO:0010051 EMBL:AC034256 GO:GO:0009867
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 HSSP:P46680
EMBL:AY046013 EMBL:AY142619 IPI:IPI00520108 PIR:G86291
RefSeq:NP_001031050.1 RefSeq:NP_001031051.1 RefSeq:NP_563981.1
RefSeq:NP_849672.1 UniGene:At.48194 UniGene:At.69991
ProteinModelPortal:Q94AI7 SMR:Q94AI7 DIP:DIP-52391N IntAct:Q94AI7
STRING:Q94AI7 PaxDb:Q94AI7 PRIDE:Q94AI7 ProMEX:Q94AI7
EnsemblPlants:AT1G15750.1 EnsemblPlants:AT1G15750.2
EnsemblPlants:AT1G15750.3 EnsemblPlants:AT1G15750.4 GeneID:838144
KEGG:ath:AT1G15750 GeneFarm:2933 TAIR:At1g15750
HOGENOM:HOG000237725 InParanoid:Q94AI7 OMA:HADRSAN PhylomeDB:Q94AI7
ProtClustDB:CLSN2687817 Genevestigator:Q94AI7 Uniprot:Q94AI7
Length = 1131
Score = 836 (299.3 bits), Expect = 4.7e-116, Sum P(2) = 4.7e-116
Identities = 171/383 (44%), Positives = 245/383 (63%)
Query: 344 ESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFL 403
+S ++ D + +S +KS KL ++EPS+CR+L LP+N ++ RLI+++SG+ +
Sbjct: 724 DSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPENLRVAKISRLIFTNSGNAI 783
Query: 404 VALTQTATHKLWKWQSNKQSLE-EENVNMESQLYQPSSKLVMTNDIA-ADPKDSISCFAL 461
+AL A H LWKWQ N+++ + ++ Q +QP+S ++MTND+A +P++++ CFAL
Sbjct: 784 LALASNAIHLLWKWQRNERNATGKATASLPPQQWQPASGILMTNDVAETNPEEAVPCFAL 843
Query: 462 --RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILV 517
S++ SASGGKIS+F++ TF+T+ATF PPP AT+ PQD + A G DDS+I +
Sbjct: 844 SKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQI 903
Query: 518 HCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQ 577
+ + K+KLKGH RIT LA+S LNVLVSSGADAQLCVW+ GW+K SK L Q
Sbjct: 904 YNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVLPLPQ 963
Query: 578 TGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSC 637
G +QFH DQ H L +HE Q+ +YE L Q + PIT+AT+SC
Sbjct: 964 -GRPNSAPSDTRVQFHQDQAHFLVVHETQLAIYETTKLECMKQWAVRESLAPITHATFSC 1022
Query: 638 DGKCIYVSCKSGHVKVFDTSTLELRCQINLTAYAQPGTISLELYPLVIAAHPLEPNRIAL 697
D + +Y S V VF ++ L LRC++N +AY + ++PLVIAAHP EPN A+
Sbjct: 1023 DSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLPASLSNSNVHPLVIAAHPQEPNMFAV 1082
Query: 698 GLTNGRVHVIEPLESEVEWGKLP 720
GL++G VH+ EPLESE +WG P
Sbjct: 1083 GLSDGGVHIFEPLESEGKWGVAP 1105
Score = 328 (120.5 bits), Expect = 4.7e-116, Sum P(2) = 4.7e-116
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 2 NGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSV 61
NG W++ EKYLS FTK+DD+ +S K+FFE+RK KY EAL +H+R +A I KDLKVFS
Sbjct: 47 NGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFST 106
Query: 62 SQNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCV 121
+ E+ +LL L++ RENEQLS Y + S+RA ++ LK L++ N + +DKL FP +
Sbjct: 107 FNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166
Query: 122 NNSALSSLI 130
NS L +LI
Sbjct: 167 RNSRLRTLI 175
Score = 270 (100.1 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 47/84 (55%), Positives = 67/84 (79%)
Query: 144 ELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMNDN 203
EL++LI QFL+EE+FKET+HKLEQE+ FF++ YF + + +G WD EKYLS FT ++DN
Sbjct: 7 ELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDN 66
Query: 204 TYSAKMFSQIQRQKYLEAVDRQQK 227
YS K+F +I++QKYLEA+D+ +
Sbjct: 67 RYSMKIFFEIRKQKYLEALDKHDR 90
Score = 138 (53.6 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 36/130 (27%), Positives = 71/130 (54%)
Query: 170 RVFFDINYFREYITSGEWDNAEKYLSAFTNMND--NTYSAKMFSQIQRQKYLEAVDRQQK 227
++FF+I ++Y+ + + + K + +T++ ++F +I + LE ++
Sbjct: 71 KIFFEIRK-QKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 129
Query: 228 LPSDFAE----RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCIN 283
L S + + RA + + K L+E NP+ +DKL+FP++ SRL +LI Q ++W C N
Sbjct: 130 L-SKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLNWQHQLCKN 188
Query: 284 VMPNANNETI 293
PN + +T+
Sbjct: 189 PRPNPDIKTL 198
Score = 51 (23.0 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 27/122 (22%), Positives = 53/122 (43%)
Query: 528 KLKGHQNRITCLAYSLSLNVL--VSSGADAQLCVWDAV-GWKKLCSKFLHSFQTGLVPET 584
++ H + +++S L ++ G D + VWDA G K+ H+F+ P
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKR------HTFEGHEAPVY 510
Query: 585 TIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYV 644
++ H + + I ++ +G+I + + S++ D T YS DG ++
Sbjct: 511 SVCPHYKENIQFIFSTAL-DGKIKAWLYDNMG--SRVDYDAPGRWCTTMAYSADGTRLF- 566
Query: 645 SC 646
SC
Sbjct: 567 SC 568
Score = 38 (18.4 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 85 LSGYTNATSSRAKLIDSLKLLVKENRILQ--DKLIFPCVNNSALSSLIKLICPSFEKETK 142
LSG+T +R + + +++ + L+ DK P A+ L+K +
Sbjct: 57 LSGFTKVDDNRYSM--KIFFEIRKQKYLEALDKHDRP----KAVDILVKDL--KVFSTFN 108
Query: 143 EELIYLIHQFLNEEEFKE 160
EEL I Q L E F+E
Sbjct: 109 EELFKEITQLLTLENFRE 126
Score = 37 (18.1 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 505 LFAFGF--DDSSILVHCPCTK-KTKAKLKG-HQNRITCLAYSLSLNVLVSSGADAQLCVW 560
LF+ G D S +V ++ K +G H+ + + + + N +++G D + W
Sbjct: 565 LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFW 624
Query: 561 D 561
D
Sbjct: 625 D 625
>TAIR|locus:2198888 [details] [associations]
symbol:TPR1 "TOPLESS-related 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AC018849 EMBL:AC034256 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AK226879 IPI:IPI00542045 IPI:IPI00852338 PIR:G96836
RefSeq:NP_178164.3 RefSeq:NP_849913.2 UniGene:At.25188
ProteinModelPortal:Q0WV90 SMR:Q0WV90 DIP:DIP-59361N STRING:Q0WV90
PaxDb:Q0WV90 PRIDE:Q0WV90 EnsemblPlants:AT1G80490.2 GeneID:844388
KEGG:ath:AT1G80490 GeneFarm:3123 TAIR:At1g80490 InParanoid:Q0WV90
OMA:FMDATIC PhylomeDB:Q0WV90 Genevestigator:Q0WV90 Uniprot:Q0WV90
Length = 1120
Score = 833 (298.3 bits), Expect = 2.0e-115, Sum P(2) = 2.0e-115
Identities = 170/383 (44%), Positives = 244/383 (63%)
Query: 344 ESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFL 403
+S ++ D + +S +KS KL + EPS+CR+L LP+N ++ RLI+++SG+ +
Sbjct: 713 DSRNMVDVKPVITEESNDKSKVWKLTEVGEPSQCRSLRLPENMRVTKISRLIFTNSGNAI 772
Query: 404 VALTQTATHKLWKWQSN-KQSLEEENVNMESQLYQPSSKLVMTNDIA-ADPKDSISCFAL 461
+AL A H LWKWQ N + + + ++ Q +QP+S ++MTND+A +P++++ CFAL
Sbjct: 773 LALASNAIHLLWKWQRNDRNATGKATASLPPQQWQPASGILMTNDVAETNPEEAVPCFAL 832
Query: 462 --RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILV 517
S++ SASGGKIS+F++ TF+T+ATF PPP AT+ PQD + A G DDS+I +
Sbjct: 833 SKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQI 892
Query: 518 HCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQ 577
+ + K+KLKGH RIT LA+S LNVLVSSGADAQLCVW+ GW+K SK L Q
Sbjct: 893 YNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQKSKVLQIPQ 952
Query: 578 TGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSC 637
G + +QFH DQ+H L +HE Q+ +YE L Q + PIT+AT+SC
Sbjct: 953 -GRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKLECMKQWPVRESAAPITHATFSC 1011
Query: 638 DGKCIYVSCKSGHVKVFDTSTLELRCQINLTAYAQPGTISLELYPLVIAAHPLEPNRIAL 697
D + IY S + VF ++ L LRC++N +AY + ++PLVIAAHP E N A+
Sbjct: 1012 DSQLIYTSFMDATICVFSSANLRLRCRVNPSAYLPASLSNSNVHPLVIAAHPQESNMFAV 1071
Query: 698 GLTNGRVHVIEPLESEVEWGKLP 720
GL++G VH+ EPLESE +WG P
Sbjct: 1072 GLSDGGVHIFEPLESEGKWGVAP 1094
Score = 325 (119.5 bits), Expect = 2.0e-115, Sum P(2) = 2.0e-115
Identities = 65/129 (50%), Positives = 89/129 (68%)
Query: 2 NGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSV 61
NG W++ EKYLS FTK+DD+ +S K+FFE+RK KY EAL RH+R +A I KDLKVFS
Sbjct: 47 NGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFST 106
Query: 62 SQNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCV 121
+ E+ +LL L++ RENEQLS Y + S+RA ++ LK L++ N + +DKL FP +
Sbjct: 107 FNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166
Query: 122 NNSALSSLI 130
S L +LI
Sbjct: 167 RTSRLRTLI 175
Score = 273 (101.2 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 48/84 (57%), Positives = 67/84 (79%)
Query: 144 ELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMNDN 203
EL++LI QFL+EE+FKET+HKLEQE+ FF++ YF + + +G WD EKYLS FT ++DN
Sbjct: 7 ELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDN 66
Query: 204 TYSAKMFSQIQRQKYLEAVDRQQK 227
YS K+F +I++QKYLEA+DR +
Sbjct: 67 RYSMKIFFEIRKQKYLEALDRHDR 90
Score = 140 (54.3 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 44/163 (26%), Positives = 82/163 (50%)
Query: 170 RVFFDINYFREYITSGEWDNAEKYLSAFTNMND--NTYSAKMFSQIQRQKYLEAVDRQQK 227
++FF+I ++Y+ + + + K + +T++ ++F +I + LE ++
Sbjct: 71 KIFFEIRK-QKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 129
Query: 228 LPSDFAE----RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCIN 283
L S + + RA + + K L+E NP+ +DKL+FP++ SRL +LI Q ++W C N
Sbjct: 130 L-SKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQLCKN 188
Query: 284 VMPNANNETISLKDFPTVSNLRYASS-----ILTDKPNQEGRP 321
PN + +T+ + + N A S +L P EG P
Sbjct: 189 PRPNPDIKTLFVDHSCRLPNDARAPSPVNNPLLGSLPKAEGFP 231
Score = 37 (18.1 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 505 LFAFGF--DDSSILVHCPCTK-KTKAKLKG-HQNRITCLAYSLSLNVLVSSGADAQLCVW 560
LF+ G D S +V ++ K +G H+ + + + + N +++G D + W
Sbjct: 565 LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFW 624
Query: 561 D 561
D
Sbjct: 625 D 625
>TAIR|locus:2086770 [details] [associations]
symbol:TPR2 "TOPLESS-related 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AB028608 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HSSP:P46680 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AY074277 IPI:IPI00523281 RefSeq:NP_188306.2 UniGene:At.24033
ProteinModelPortal:Q9LRZ0 SMR:Q9LRZ0 DIP:DIP-58586N STRING:Q9LRZ0
PaxDb:Q9LRZ0 PRIDE:Q9LRZ0 EnsemblPlants:AT3G16830.1 GeneID:820936
KEGG:ath:AT3G16830 GeneFarm:3122 TAIR:At3g16830 InParanoid:Q9LRZ0
OMA:KSARSIM PhylomeDB:Q9LRZ0 Genevestigator:Q9LRZ0 Uniprot:Q9LRZ0
Length = 1131
Score = 721 (258.9 bits), Expect = 2.9e-102, Sum P(3) = 2.9e-102
Identities = 153/367 (41%), Positives = 225/367 (61%)
Query: 359 SLEKSVNLKLQLINEPSECRTLLLPDNSFG-GRVVRLIYSHSGDFLVALTQTATHKLWKW 417
S++KS L+L I +P++CR + +PD+ +V RL+Y++SG ++AL +LWKW
Sbjct: 735 SVDKSKPLELTEIVDPTQCRQVTMPDSKDSVSKVARLLYTNSGVGVLALGSNGVQRLWKW 794
Query: 418 QSNKQS-LEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFAL--RGSHLFSASGGKI 474
N+Q+ + ++ Q +QP+S L+M ND+ +P+ S+ C AL S++ SA GGK+
Sbjct: 795 IRNEQNPTGKATASVTPQHWQPNSGLLMANDVPENPEGSVPCIALSKNDSYVMSACGGKV 854
Query: 475 SIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILVHCPCTKKTKAKLKGH 532
S+F++ TF+ + TF PPP +T+ PQD + A G +DSSI ++ + K KLKGH
Sbjct: 855 SLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGH 914
Query: 533 QNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQF 592
Q IT LA+S +LN+LVSSGADAQL W A W+K S + G P +QF
Sbjct: 915 QKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQ-LPPGKAPVGD--TRVQF 971
Query: 593 HPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDK-MDLPITYATYSCDGKCIYVSCKSGHV 651
H DQI LL HE Q+ +Y+A + + VP + + PIT A+YSC+ + +Y S G++
Sbjct: 972 HNDQIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSASYSCNSQLVYASFADGNI 1031
Query: 652 KVFDTSTLELRCQINLTAYA-QPGTISLELYPLVIAAHPLEPNRIALGLTNGRVHVIEPL 710
VFD +L LRC+I +AY QP S ++P VI AHP EPN++A+GL++G V VIEP
Sbjct: 1032 AVFDAESLRLRCRIAPSAYMPQPTPNSAPIFPQVITAHPQEPNQLAVGLSDGSVKVIEPS 1091
Query: 711 ESEVEWG 717
E WG
Sbjct: 1092 ELSRRWG 1098
Score = 307 (113.1 bits), Expect = 2.9e-102, Sum P(3) = 2.9e-102
Identities = 61/128 (47%), Positives = 87/128 (67%)
Query: 3 GEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVS 62
GEW++ EKYLS FTK+DD+ +S K+FFE+RK KY EAL R++R +A I KDLKVF+
Sbjct: 48 GEWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATF 107
Query: 63 QNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVN 122
+ E+ +LL L++ RENEQLS Y + S+R+ + LK L++ N + ++KL FP
Sbjct: 108 NEELYKEITQLLTLENFRENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFK 167
Query: 123 NSALSSLI 130
S L +LI
Sbjct: 168 ASRLRTLI 175
Score = 277 (102.6 bits), Expect = 4.1e-99, Sum P(3) = 4.1e-99
Identities = 50/84 (59%), Positives = 67/84 (79%)
Query: 144 ELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMNDN 203
EL++LI QFL+EE+FKE++HKLEQE+ FF+I YF E +GEWD EKYLS FT ++DN
Sbjct: 7 ELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDN 66
Query: 204 TYSAKMFSQIQRQKYLEAVDRQQK 227
YS K+F +I++QKYLEA+DR +
Sbjct: 67 RYSMKIFFEIRKQKYLEALDRNDR 90
Score = 141 (54.7 bits), Expect = 7.3e-83, Sum P(2) = 7.3e-83
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 170 RVFFDINYFREYITSGEW-DNAE------KYLSAFTNMNDNTYSAKMFSQIQRQKYLEAV 222
++FF+I ++Y+ + + D A+ K L F N+ Y K +Q+ +
Sbjct: 71 KIFFEIRK-QKYLEALDRNDRAKAVEILAKDLKVFATFNEELY--KEITQLLTLENFREN 127
Query: 223 DRQQKLPSDFAERAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCI 282
++ K + R+ ++ + K L+E NP+ ++KL FPS SRL +LI Q ++W C
Sbjct: 128 EQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLNWQHQLCK 187
Query: 283 NVMPNANNETISLKDFPTVSN 303
N PN + +T+ L + SN
Sbjct: 188 NPRPNPDIKTLFLDHSCSPSN 208
Score = 54 (24.1 bits), Expect = 3.6e-24, Sum P(3) = 3.6e-24
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 391 VVRLIYSHSGDFL-VALTQTATHKLWKWQSN--KQSLE-EENVNMESQLY--QPSSKLVM 444
V R+ +S G+ L V+ T+ H ++ +Q + +Q LE + +V + L P+ ++ +
Sbjct: 412 VTRVAWSPDGNLLGVSFTKHLIH-VYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCV 470
Query: 445 TNDIAADPKDSISCFALRGSHLFSASGGKISIFSL 479
D K I + L G LF+ G + ++S+
Sbjct: 471 VT--CGDDK-LIKVWDLSGKKLFTFEGHEAPVYSI 502
Score = 47 (21.6 bits), Expect = 3.6e-24, Sum P(3) = 3.6e-24
Identities = 30/135 (22%), Positives = 53/135 (39%)
Query: 545 LNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHE 604
+ +LVS + QL ++DA K C +H + + I + Q+ S +
Sbjct: 976 IQLLVSH--ETQLAIYDAS--KMEC---IHKWVPQEALSSPITSASYSCNSQLVYASFAD 1028
Query: 605 GQIDVYEAPTLN---------HTSQLVPDKMDL-PITYATYSCDGKCIYVSCKSGHVKVF 654
G I V++A +L + Q P+ + P + + + V G VKV
Sbjct: 1029 GNIAVFDAESLRLRCRIAPSAYMPQPTPNSAPIFPQVITAHPQEPNQLAVGLSDGSVKVI 1088
Query: 655 DTSTLELRCQINLTA 669
+ S L R + + A
Sbjct: 1089 EPSELSRRWGVGVAA 1103
Score = 46 (21.3 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 548 LVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQI 607
+V+ G D + VWD G KKL +F+ P +I H Q Q + +G+I
Sbjct: 470 VVTCGDDKLIKVWDLSG-KKL-----FTFEGHEAPVYSICPH-QKENIQFIFSTALDGKI 522
Query: 608 DVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLE 660
+ + S++ D T YS DG ++ SC G K D+ +E
Sbjct: 523 KAWLYDNVG--SRVDYDAPGQWCTTMLYSADGSRLF-SC--GTSKEGDSFLVE 570
Score = 40 (19.1 bits), Expect = 8.4e-22, Sum P(3) = 8.4e-22
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 581 VPETTIVNHIQFHPDQIHLLSI--HEGQIDVYE 611
+ + ++V + FHP LL++ G++ ++E
Sbjct: 344 IRQGSVVISMDFHPSHHTLLAVGCSSGEVTLWE 376
Score = 38 (18.4 bits), Expect = 2.9e-102, Sum P(3) = 2.9e-102
Identities = 6/18 (33%), Positives = 15/18 (83%)
Query: 254 DKLKFPSMDKSRLLSLIK 271
+++KF +MD + LL++++
Sbjct: 609 NQIKFWNMDNTNLLTVVE 626
Score = 38 (18.4 bits), Expect = 8.4e-22, Sum P(3) = 8.4e-22
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 628 LPITYATYSCDGKCIYVSCKSGHVKVFDTSTLELRCQINLTAY 670
+ +T +S DG + VS + V+ +LR + + A+
Sbjct: 410 ISVTRVAWSPDGNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAH 452
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 93 (37.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 39/171 (22%), Positives = 74/171 (43%)
Query: 395 IYSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKD 454
++S ++LV+ ++ ++W + + K L ++ YQ L+M + AA
Sbjct: 221 VFSPDANYLVSGSKDGFIEVWNYMNGK--LRKD------LKYQAQDNLMMMD--AA---- 266
Query: 455 SISCFAL-RGSHLFSASG--GKISIFSLETFQTLATF--ANPPPIATYFILLPQDLFAFG 509
+ C + R S + + GKI ++ +ET L F A+ + G
Sbjct: 267 -VRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSG 325
Query: 510 FDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVW 560
+D + VH + K +++GH + IT + YS N ++S D + VW
Sbjct: 326 GNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVW 376
Score = 92 (37.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 136 SFEKETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFD----INYFREYITSGEWDNAE 191
S E E+ + +I LI QFL E TL L++ET V + I+ F ITSG WDN
Sbjct: 3 SIEIESSD-VIRLIEQFLKESNLHRTLAILQEETNVSLNTVDSIDGFCNEITSGNWDNVL 61
Query: 192 K 192
K
Sbjct: 62 K 62
Score = 40 (19.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 264 SRLLSLIKQIMDW 276
SRLLSL+ Q + W
Sbjct: 159 SRLLSLLGQSLKW 171
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 522 TKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLV 581
T K + KLKGH + +A S + SS D+ +C+WDA K K L SF G V
Sbjct: 74 TLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDK---KHLLSF--GPV 128
Query: 582 PETTIVNHIQFHPDQIHLLS-IHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGK 640
T+ QF P +++S +++G+I +Y T L ++ A YS DGK
Sbjct: 129 DLWTV----QFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIA-YSPDGK 183
Query: 641 CIYVSCKSGHVKVFDTS 657
I G + +FD +
Sbjct: 184 YIASGAIDGIITIFDVA 200
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 134 (52.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 53/205 (25%), Positives = 89/205 (43%)
Query: 419 SNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIF- 477
+N + ++N +Y + + V + I KD ++ AL + S K S++
Sbjct: 303 NNNNDNDGSHLNNNEYIYD-NYQFVSAHVITKH-KDHVTSLALHPLENYFISSSKDSMWI 360
Query: 478 --SLETFQTLATFANPPPIATYFILLPQDL-FAFGFDDSSILVHCPCTKKTKAKLKGHQN 534
LET +T+ T + P + + P + F DS+I ++ +++ KA L GH
Sbjct: 361 LHDLETAKTIKTSKDNPSSFKHLAIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTK 420
Query: 535 RITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHP 594
+ CL++S + L SS D + +WD +K SFQT + ET N I F
Sbjct: 421 SLNCLSFSENGYYLASSSKDNTVKLWDL---RKA-----QSFQTITLNETP--NFISFDY 470
Query: 595 DQIHLLSIHEGQIDVYEAPTLNHTS 619
+L E I +Y T N +
Sbjct: 471 SGKYLSIAVENDIQIYNFETKNQAN 495
Score = 42 (19.8 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 410 ATHKLWKWQSNKQSLEEENVNMESQLYQPSS 440
AT + K K +EE N++ Q++Q S
Sbjct: 112 ATRVIAKLLKEKNGYKEEIENLKKQIFQLKS 142
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 134 (52.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 53/205 (25%), Positives = 89/205 (43%)
Query: 419 SNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIF- 477
+N + ++N +Y + + V + I KD ++ AL + S K S++
Sbjct: 303 NNNNDNDGSHLNNNEYIYD-NYQFVSAHVITKH-KDHVTSLALHPLENYFISSSKDSMWI 360
Query: 478 --SLETFQTLATFANPPPIATYFILLPQDL-FAFGFDDSSILVHCPCTKKTKAKLKGHQN 534
LET +T+ T + P + + P + F DS+I ++ +++ KA L GH
Sbjct: 361 LHDLETAKTIKTSKDNPSSFKHLAIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTK 420
Query: 535 RITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHP 594
+ CL++S + L SS D + +WD +K SFQT + ET N I F
Sbjct: 421 SLNCLSFSENGYYLASSSKDNTVKLWDL---RKA-----QSFQTITLNETP--NFISFDY 470
Query: 595 DQIHLLSIHEGQIDVYEAPTLNHTS 619
+L E I +Y T N +
Sbjct: 471 SGKYLSIAVENDIQIYNFETKNQAN 495
Score = 42 (19.8 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 410 ATHKLWKWQSNKQSLEEENVNMESQLYQPSS 440
AT + K K +EE N++ Q++Q S
Sbjct: 112 ATRVIAKLLKEKNGYKEEIENLKKQIFQLKS 142
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 65/246 (26%), Positives = 104/246 (42%)
Query: 391 VVRLIYSHSGDFLVALTQTATHKLWKWQSN--KQSLEEENVNMESQLYQPSSKLVMTNDI 448
V + +S +G L + + T KLW S+ K ++E + +ES + P+ +L N
Sbjct: 86 VQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL--WNPA 143
Query: 449 AADPKDSIS---------CFALRGSHLFSASGGK-ISIFSLETFQTLATFANPPPIATYF 498
K +I F+ G L S S K I ++ T T
Sbjct: 144 IGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPL 203
Query: 499 ILLPQD-LFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQL 557
+ P L A G +D++I + P + K L+GH N+I LA+S + +L S +DA +
Sbjct: 204 VFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATI 263
Query: 558 CVWD-AVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQ--IDVYEAPT 614
+WD A G SF+ L + +V + F PD LL G I +++ T
Sbjct: 264 KLWDTATG----------SFRHTLKGHSDMVLSVVFSPDS-QLLESGSGDNTIKLWDPAT 312
Query: 615 --LNHT 618
L H+
Sbjct: 313 GILKHS 318
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
Identities = 39/154 (25%), Positives = 72/154 (46%)
Query: 505 LFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVG 564
L G DD ++ V T K+ LKGH N + C ++ N++VS D + +WD
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 187
Query: 565 WKKLCSKFLHSFQTGLVPETTIVNHIQFHPD-QIHLLSIHEGQIDVYEAPTLNHTSQLVP 623
K C K L + P V+ + F+ D + + S ++G +++ + L+
Sbjct: 188 GK--CLKTLPAHSD---P----VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 238
Query: 624 DKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTS 657
D + P+++ +S +GK I + +K++D S
Sbjct: 239 DD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYS 271
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 89 (36.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 43/191 (22%), Positives = 84/191 (43%)
Query: 2 NGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSV 61
+G+W+++ K L D K F L + K+ E L + +A R ++ +
Sbjct: 110 DGKWDQSVKTLHRIG-FPDEKAVKAASFLLLEQKFLEFLKVEKIADALRTLRNEMAPLRI 168
Query: 62 SQNRIDCELAE-LLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPC 120
+ R+ ELA L++ + + + +SR+K+++ L+ L+ + I+ +K +
Sbjct: 169 NTKRVH-ELASSLISPSSFISHTTSTPGKESVNSRSKVLEELQTLLPASVIIPEKRLECL 227
Query: 121 VNNSALSSLIKLICPSFEKETKEEL-IYLIHQFLNEEEFKETLHKLEQET-RVFF-DINY 177
V NS + + C F +L +Y HQ + +T LE T V+F ++
Sbjct: 228 VENSL--HIQRDSCV-FHNTLDSDLSLYSDHQCGKHQIPSQTAQILESHTDEVWFLQFSH 284
Query: 178 FREYITSGEWD 188
+Y+ S D
Sbjct: 285 NGKYLASSSKD 295
Score = 80 (33.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 503 QDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYS-LSLNVLVSSGADAQLCVW 560
Q A G +DS + + T K +L GH + C+++S +L++L S+ D + +W
Sbjct: 501 QAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 737 717 0.00084 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 624 (66 KB)
Total size of DFA: 391 KB (2191 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.59u 0.10s 64.69t Elapsed: 00:00:03
Total cpu time: 64.60u 0.10s 64.70t Elapsed: 00:00:03
Start: Thu May 9 14:10:05 2013 End: Thu May 9 14:10:08 2013