BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004683
(737 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q27GK7|TPR4_ARATH Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 PE=1 SV=2
Length = 1135
Score = 335 bits (859), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/380 (46%), Positives = 239/380 (62%), Gaps = 9/380 (2%)
Query: 344 ESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFL 403
++ SLPD + A EKS KL I+E S+ RTL LPD RVV+LIY++SG +
Sbjct: 735 DNRSLPDVKPRI-ADDAEKSKTWKLTEISERSQLRTLRLPDTLLPARVVKLIYTNSGGAI 793
Query: 404 VALTQTATHKLWKWQ-SNKQSLEEENVNMESQLYQPSSKLVMTNDI-AADPKDSISCFAL 461
+AL + A HKLWKWQ S + L + N N+ QL+QPSS ++MTND + +D + CFAL
Sbjct: 794 LALAENAAHKLWKWQKSERNLLGKANSNVPPQLWQPSSGVLMTNDTREGNKEDVVPCFAL 853
Query: 462 --RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILV 517
S++ SASGGKIS+F++ TF+T+ TF PPP AT PQD + A G DDSSI +
Sbjct: 854 SKNDSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQI 913
Query: 518 HCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQ 577
+ + K+KLKGHQ R+T LA+S LNVLVSSGAD+QLCVW GW+K SK +
Sbjct: 914 YNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQ-IP 972
Query: 578 TGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSC 637
+G P +QFH DQIH+L +H Q+ +YEAP L + Q +P + +T A YSC
Sbjct: 973 SGHSPNPLAHTRVQFHQDQIHVLVVHASQLAIYEAPKLENMKQWIPKESSGSVTDAVYSC 1032
Query: 638 DGKCIYVSCKSGHVKVFDTSTLELRCQINLTAYAQPGTISLELYPLVIAAHPLEPNRIAL 697
D + IY + G V + +TL+L+C+I +Y P S +YP +AAHP EPN+ A+
Sbjct: 1033 DSQSIYAAFDDGSVSILTATTLQLKCRIGPNSYL-PSNPSSRVYPATVAAHPSEPNQFAV 1091
Query: 698 GLTNGRVHVIEPLESEVEWG 717
GLT+G VHVIEP E +WG
Sbjct: 1092 GLTDGGVHVIEPPGPEGKWG 1111
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 112/193 (58%), Gaps = 42/193 (21%)
Query: 143 EELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMND 202
EL++LI QFL+EE+FK+T+H+LE+E+ FF++ YF + +T+GEWD+ EKYLS FT ++D
Sbjct: 6 RELVFLILQFLDEEKFKDTVHRLEKESGFFFNMRYFEDSVTAGEWDDVEKYLSGFTKVDD 65
Query: 203 NTYSAKMFSQIQRQKYLEAVDRQQ------------KLPSDFAE---------------- 234
N YS K+F +I++QKYLEA+D++ K+ S F E
Sbjct: 66 NRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITMLLTLTNFR 125
Query: 235 --------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPY 280
R + + K L+E NP+ +DKL+FPS+ SRL +LI Q ++W
Sbjct: 126 ENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNWQHQL 185
Query: 281 CINVMPNANNETI 293
C N PN + +T+
Sbjct: 186 CKNPRPNPDIKTL 198
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 3 GEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVS 62
GEW+ EKYLS FTK+DD+ +S K+FFE+RK KY EAL + + +A I K+LKVFS
Sbjct: 48 GEWDDVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTF 107
Query: 63 QNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVN 122
+ E+ LL L + RENEQLS Y + S+R ++ LK L++ N + +DKL FP +
Sbjct: 108 NEELFKEITMLLTLTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSLK 167
Query: 123 NSALSSLI 130
NS L +LI
Sbjct: 168 NSRLRTLI 175
>sp|Q94AI7|TPL_ARATH Protein TOPLESS OS=Arabidopsis thaliana GN=TPL PE=1 SV=1
Length = 1131
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/402 (42%), Positives = 250/402 (62%), Gaps = 7/402 (1%)
Query: 325 SSGDDSNDSSCFNDNNQSRESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPD 384
S+G ++ + + +S ++ D + +S +KS KL ++EPS+CR+L LP+
Sbjct: 705 SAGHADRSANVVSIQGMNGDSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPE 764
Query: 385 NSFGGRVVRLIYSHSGDFLVALTQTATHKLWKWQSN-KQSLEEENVNMESQLYQPSSKLV 443
N ++ RLI+++SG+ ++AL A H LWKWQ N + + + ++ Q +QP+S ++
Sbjct: 765 NLRVAKISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPPQQWQPASGIL 824
Query: 444 MTNDIA-ADPKDSISCFAL--RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFIL 500
MTND+A +P++++ CFAL S++ SASGGKIS+F++ TF+T+ATF PPP AT+
Sbjct: 825 MTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAF 884
Query: 501 LPQD--LFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLC 558
PQD + A G DDS+I ++ + K+KLKGH RIT LA+S LNVLVSSGADAQLC
Sbjct: 885 HPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLC 944
Query: 559 VWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHT 618
VW+ GW+K SK L G +QFH DQ H L +HE Q+ +YE L
Sbjct: 945 VWNTDGWEKQRSKVL-PLPQGRPNSAPSDTRVQFHQDQAHFLVVHETQLAIYETTKLECM 1003
Query: 619 SQLVPDKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLELRCQINLTAYAQPGTISL 678
Q + PIT+AT+SCD + +Y S V VF ++ L LRC++N +AY +
Sbjct: 1004 KQWAVRESLAPITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLPASLSNS 1063
Query: 679 ELYPLVIAAHPLEPNRIALGLTNGRVHVIEPLESEVEWGKLP 720
++PLVIAAHP EPN A+GL++G VH+ EPLESE +WG P
Sbjct: 1064 NVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAP 1105
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 42/193 (21%)
Query: 143 EELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMND 202
EL++LI QFL+EE+FKET+HKLEQE+ FF++ YF + + +G WD EKYLS FT ++D
Sbjct: 6 RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65
Query: 203 NTYSAKMFSQIQRQKYLEAVDRQQ------------KLPSDFAE---------------- 234
N YS K+F +I++QKYLEA+D+ K+ S F E
Sbjct: 66 NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125
Query: 235 --------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPY 280
RA + + K L+E NP+ +DKL+FP++ SRL +LI Q ++W
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLNWQHQL 185
Query: 281 CINVMPNANNETI 293
C N PN + +T+
Sbjct: 186 CKNPRPNPDIKTL 198
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 2 NGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSV 61
NG W++ EKYLS FTK+DD+ +S K+FFE+RK KY EAL +H+R +A I KDLKVFS
Sbjct: 47 NGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFST 106
Query: 62 SQNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCV 121
+ E+ +LL L++ RENEQLS Y + S+RA ++ LK L++ N + +DKL FP +
Sbjct: 107 FNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166
Query: 122 NNSALSSLI 130
NS L +LI
Sbjct: 167 RNSRLRTLI 175
>sp|Q0WV90|TPR1_ARATH Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3
Length = 1120
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/445 (41%), Positives = 266/445 (59%), Gaps = 21/445 (4%)
Query: 282 INVMPNANNETISLKDFPTVSNLRYASSILTDKPNQEGRPLDASSGDDSNDSSCFNDNNQ 341
I VM N++ L+ TV NL SS KP P+ +S +
Sbjct: 665 IKVMANSDG----LRLLHTVENLSSESS----KPAINSIPMV------ERPASVVSIPGM 710
Query: 342 SRESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGD 401
+ +S ++ D + +S +KS KL + EPS+CR+L LP+N ++ RLI+++SG+
Sbjct: 711 NGDSRNMVDVKPVITEESNDKSKVWKLTEVGEPSQCRSLRLPENMRVTKISRLIFTNSGN 770
Query: 402 FLVALTQTATHKLWKWQSN-KQSLEEENVNMESQLYQPSSKLVMTNDIA-ADPKDSISCF 459
++AL A H LWKWQ N + + + ++ Q +QP+S ++MTND+A +P++++ CF
Sbjct: 771 AILALASNAIHLLWKWQRNDRNATGKATASLPPQQWQPASGILMTNDVAETNPEEAVPCF 830
Query: 460 AL--RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSI 515
AL S++ SASGGKIS+F++ TF+T+ATF PPP AT+ PQD + A G DDS+I
Sbjct: 831 ALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTI 890
Query: 516 LVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHS 575
++ + K+KLKGH RIT LA+S LNVLVSSGADAQLCVW+ GW+K SK L
Sbjct: 891 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQKSKVLQI 950
Query: 576 FQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATY 635
Q G + +QFH DQ+H L +HE Q+ +YE L Q + PIT+AT+
Sbjct: 951 PQ-GRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKLECMKQWPVRESAAPITHATF 1009
Query: 636 SCDGKCIYVSCKSGHVKVFDTSTLELRCQINLTAYAQPGTISLELYPLVIAAHPLEPNRI 695
SCD + IY S + VF ++ L LRC++N +AY + ++PLVIAAHP E N
Sbjct: 1010 SCDSQLIYTSFMDATICVFSSANLRLRCRVNPSAYLPASLSNSNVHPLVIAAHPQESNMF 1069
Query: 696 ALGLTNGRVHVIEPLESEVEWGKLP 720
A+GL++G VH+ EPLESE +WG P
Sbjct: 1070 AVGLSDGGVHIFEPLESEGKWGVAP 1094
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 122/232 (52%), Gaps = 47/232 (20%)
Query: 143 EELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMND 202
EL++LI QFL+EE+FKET+HKLEQE+ FF++ YF + + +G WD EKYLS FT ++D
Sbjct: 6 RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65
Query: 203 NTYSAKMFSQIQRQKYLEAVDRQQ------------KLPSDFAE---------------- 234
N YS K+F +I++QKYLEA+DR K+ S F E
Sbjct: 66 NRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125
Query: 235 --------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPY 280
RA + + K L+E NP+ +DKL+FP++ SRL +LI Q ++W
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL 185
Query: 281 CINVMPNANNETISLKDFPTVSNLRYASS-----ILTDKPNQEGRPLDASSG 327
C N PN + +T+ + + N A S +L P EG P + G
Sbjct: 186 CKNPRPNPDIKTLFVDHSCRLPNDARAPSPVNNPLLGSLPKAEGFPPLGAHG 237
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 89/129 (68%)
Query: 2 NGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSV 61
NG W++ EKYLS FTK+DD+ +S K+FFE+RK KY EAL RH+R +A I KDLKVFS
Sbjct: 47 NGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFST 106
Query: 62 SQNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCV 121
+ E+ +LL L++ RENEQLS Y + S+RA ++ LK L++ N + +DKL FP +
Sbjct: 107 FNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166
Query: 122 NNSALSSLI 130
S L +LI
Sbjct: 167 RTSRLRTLI 175
>sp|Q9LRZ0|TPR2_ARATH Topless-related protein 2 OS=Arabidopsis thaliana GN=TPR2 PE=1 SV=2
Length = 1131
Score = 285 bits (729), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 226/369 (61%), Gaps = 15/369 (4%)
Query: 359 SLEKSVNLKLQLINEPSECRTLLLPDNSFG-GRVVRLIYSHSGDFLVALTQTATHKLWKW 417
S++KS L+L I +P++CR + +PD+ +V RL+Y++SG ++AL +LWKW
Sbjct: 735 SVDKSKPLELTEIVDPTQCRQVTMPDSKDSVSKVARLLYTNSGVGVLALGSNGVQRLWKW 794
Query: 418 QSNKQS-LEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFAL--RGSHLFSASGGKI 474
N+Q+ + ++ Q +QP+S L+M ND+ +P+ S+ C AL S++ SA GGK+
Sbjct: 795 IRNEQNPTGKATASVTPQHWQPNSGLLMANDVPENPEGSVPCIALSKNDSYVMSACGGKV 854
Query: 475 SIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILVHCPCTKKTKAKLKGH 532
S+F++ TF+ + TF PPP +T+ PQD + A G +DSSI ++ + K KLKGH
Sbjct: 855 SLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGH 914
Query: 533 QNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVN--HI 590
Q IT LA+S +LN+LVSSGADAQL W A W+K S + L P V +
Sbjct: 915 QKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQ-----LPPGKAPVGDTRV 969
Query: 591 QFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVP-DKMDLPITYATYSCDGKCIYVSCKSG 649
QFH DQI LL HE Q+ +Y+A + + VP + + PIT A+YSC+ + +Y S G
Sbjct: 970 QFHNDQIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSASYSCNSQLVYASFADG 1029
Query: 650 HVKVFDTSTLELRCQINLTAY-AQPGTISLELYPLVIAAHPLEPNRIALGLTNGRVHVIE 708
++ VFD +L LRC+I +AY QP S ++P VI AHP EPN++A+GL++G V VIE
Sbjct: 1030 NIAVFDAESLRLRCRIAPSAYMPQPTPNSAPIFPQVITAHPQEPNQLAVGLSDGSVKVIE 1089
Query: 709 PLESEVEWG 717
P E WG
Sbjct: 1090 PSELSRRWG 1098
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 42/194 (21%)
Query: 144 ELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMNDN 203
EL++LI QFL+EE+FKE++HKLEQE+ FF+I YF E +GEWD EKYLS FT ++DN
Sbjct: 7 ELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDN 66
Query: 204 TYSAKMFSQIQRQKYLEAVDRQQKLPS-----------------------------DFAE 234
YS K+F +I++QKYLEA+DR + + +F E
Sbjct: 67 RYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENFRE 126
Query: 235 -------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYC 281
R+ ++ + K L+E NP+ ++KL FPS SRL +LI Q ++W C
Sbjct: 127 NEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLNWQHQLC 186
Query: 282 INVMPNANNETISL 295
N PN + +T+ L
Sbjct: 187 KNPRPNPDIKTLFL 200
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 88/130 (67%)
Query: 1 MNGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFS 60
+ GEW++ EKYLS FTK+DD+ +S K+FFE+RK KY EAL R++R +A I KDLKVF+
Sbjct: 46 LAGEWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFA 105
Query: 61 VSQNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPC 120
+ E+ +LL L++ RENEQLS Y + S+R+ + LK L++ N + ++KL FP
Sbjct: 106 TFNEELYKEITQLLTLENFRENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPS 165
Query: 121 VNNSALSSLI 130
S L +LI
Sbjct: 166 FKASRLRTLI 175
>sp|Q84JM4|TPR3_ARATH Topless-related protein 3 OS=Arabidopsis thaliana GN=TPR3 PE=1 SV=1
Length = 1108
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 232/377 (61%), Gaps = 19/377 (5%)
Query: 359 SLEKSVNLKLQLINEPSECRTLLLPDNSFGG-RVVRLIYSHSGDFLVALTQTATHKLWKW 417
S +K + +L I +PS+C LPD + +VV+L+Y++SG ++AL +LWKW
Sbjct: 723 STDKPKSWQLAEILDPSQCFQATLPDTAGSSTKVVQLLYTNSGAGILALGSNGIQRLWKW 782
Query: 418 QSNKQSLE-EENVNMESQLYQPSSKLVMTNDIAA-DPKDSISCFAL--RGSHLFSASGGK 473
N+Q+ + + Q +QP+S L+MTND++ + +++ C AL S++ SA+GGK
Sbjct: 783 VPNEQNPSGKATATVVPQHWQPNSGLLMTNDVSGVNLENAAPCIALSKNDSYVMSAAGGK 842
Query: 474 ISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILVHCPCTKKTKAKLKG 531
+S+F++ TF+ + TF PPP +T+ PQD + A G +DS+I ++ + K+KLKG
Sbjct: 843 VSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKG 902
Query: 532 HQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVN--- 588
HQ RIT LA+S +LN+LVSSGADAQ+C W W+K S + +P N
Sbjct: 903 HQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRKSVAIQ------MPAGKAANGDT 956
Query: 589 HIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVP-DKMDLPITYATYSCDGKCIYVSCK 647
+QFH DQ+ +L +HE Q+ V++A + Q +P D + PI+ A Y+C+ + IY + +
Sbjct: 957 RVQFHVDQLRILVVHETQLAVFDASKMECIRQWIPQDSLSAPISSAVYACNSQLIYTTFR 1016
Query: 648 SGHVKVFDTSTLELRCQINLTAYAQPGTISLELYPLVIAAHPLEPNRIALGLTNGRVHVI 707
G++ VFD +L LRC+I+ +AY G L PLV+AAHP +PN+ A+GL +G V ++
Sbjct: 1017 DGNIGVFDADSLRLRCRISPSAYLPQGNQGLS--PLVVAAHPQDPNQFAVGLNDGSVKMM 1074
Query: 708 EPLESEVEWGKLPFTDS 724
EP E E +WG +P +++
Sbjct: 1075 EPTEGEGKWGMIPPSEA 1091
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 42/193 (21%)
Query: 143 EELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMND 202
EL++LI QFL EE+FKE++H+LE+E+ FF+ YF E + +GEWD+ E YLS FT ++D
Sbjct: 6 RELVFLILQFLEEEKFKESVHRLEKESGFFFNTKYFDEKVLAGEWDDVETYLSGFTKVDD 65
Query: 203 NTYSAKMFSQIQRQKYLEAVDRQQKLPS-----------------------------DFA 233
N YS K+F +I++QKYLEA+DRQ+K + +F
Sbjct: 66 NRYSMKIFFEIRKQKYLEALDRQEKAKAVEILVQDLRVFSTFNEELYKEITQLLTLQNFR 125
Query: 234 E-------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPY 280
E R + + K L+E NP+ +DKL FP++ SRL +LI Q ++W
Sbjct: 126 ENEQLSKYGDTKTARGIMLGELKKLIEANPLFRDKLMFPTLRSSRLRTLINQSLNWQHQL 185
Query: 281 CINVMPNANNETI 293
C N PN + +T+
Sbjct: 186 CKNPRPNPDIKTL 198
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 88/130 (67%)
Query: 1 MNGEWEKAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFS 60
+ GEW+ E YLS FTK+DD+ +S K+FFE+RK KY EAL R E+ +A I +DL+VFS
Sbjct: 46 LAGEWDDVETYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRQEKAKAVEILVQDLRVFS 105
Query: 61 VSQNRIDCELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPC 120
+ E+ +LL L++ RENEQLS Y + ++R ++ LK L++ N + +DKL+FP
Sbjct: 106 TFNEELYKEITQLLTLQNFRENEQLSKYGDTKTARGIMLGELKKLIEANPLFRDKLMFPT 165
Query: 121 VNNSALSSLI 130
+ +S L +LI
Sbjct: 166 LRSSRLRTLI 175
>sp|Q06078|UTP21_YEAST U3 small nucleolar RNA-associated protein 21 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP21 PE=1
SV=1
Length = 939
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 430 NMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIFSLETFQT---LA 486
NM+S + + KL K +++ +L G + S G I F L
Sbjct: 488 NMQSGILRKKYKL---------HKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKSTLLG 538
Query: 487 TFANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLN 546
PI DLFA DD SI+V T++ +L GH NRIT +S
Sbjct: 539 KLKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGR 598
Query: 547 VLVSSGADAQLCVWD 561
+VS+ D+ + WD
Sbjct: 599 WIVSASLDSTIRTWD 613
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 130/338 (38%), Gaps = 46/338 (13%)
Query: 349 PDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGD--FLVAL 406
PD + C SL++SV L CRT +G L + S D L +
Sbjct: 904 PDGQTLACV-SLDQSVRLW--------NCRTGQCLKAWYGNTDWALPVAFSPDRQILASG 954
Query: 407 TQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTNDIAADPK----DSISCFA 460
+ T KLW WQ+ K SLE + + P S+ + + + + + CF
Sbjct: 955 SNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQ 1014
Query: 461 LRGSH-------LFSASGGKIS---------IFSLETFQTLATFANPPPIATYFILLPQD 504
+ H +F G I+ ++++ T Q L T + P
Sbjct: 1015 ILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDG 1074
Query: 505 -LFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAV 563
L A D S+ + CT + L+GH NR+ +S + ++ + D + +WD
Sbjct: 1075 QLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWD-- 1132
Query: 564 GWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSI-HEGQIDVYEAPTLNHTSQLV 622
W++ K L + L T V I F PD L S H+ + +++ T +
Sbjct: 1133 -WQQ--GKCLKT----LTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNT-GKCHHIC 1184
Query: 623 PDKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLE 660
L ++ +S DG+ + + V++++ T E
Sbjct: 1185 IGHTHL-VSSVAFSPDGEVVASGSQDQTVRIWNVKTGE 1221
Score = 33.5 bits (75), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 506 FAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGW 565
A G D +I + T + GH N + +AYS +LVS D + +WD
Sbjct: 825 LASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQ-- 882
Query: 566 KKLCSKFLHSFQTGLVPETTIVNHIQFHPD 595
+C K LH T V + F PD
Sbjct: 883 THICIKTLHG-------HTNEVCSVAFSPD 905
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 67/320 (20%)
Query: 396 YSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTN------- 446
+ H ++V+ + T ++W WQS L N + + P LV++
Sbjct: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 447 --DIAA------DPKDSISCFALRGSHLFSASGGKISIFSLETFQTLATFANPPPIATYF 498
DI A P D I + LF + + LE +A+ P
Sbjct: 161 VWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVK-YVLEGHDRGVNWASFHPT---- 215
Query: 499 ILLPQDLFAFGFDDSSI-LVHCPCTKKTKA-KLKGHQNRITCLAYSLSLNVLVSSGADAQ 556
LP L G DD + L TK + L+GH N ++C+ + +++VS+ D
Sbjct: 216 --LP--LIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
Query: 557 LCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQF-----HPDQIHLLSIHEGQIDVYE 611
+ VWDA + +TG+ +T H +F HP+ L + H+ + V++
Sbjct: 272 IRVWDA------------TKRTGI--QTFRREHDRFWILAAHPEMNLLAAGHDNGMIVFK 317
Query: 612 APTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLELRCQINLTAYA 671
L +S G ++ K ++ F+ ST + ++ L
Sbjct: 318 ----------------LERERPAFSVSGDTVFY-VKDRFLRFFEYSTQK---EVQLAPIR 357
Query: 672 QPGTISLELYPLVIAAHPLE 691
+PG++SL P ++ P E
Sbjct: 358 RPGSVSLNQSPRTLSYSPTE 377
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 417 WQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSA-SGGKIS 475
W KQ L + LY+ K +TN C + G+ L S S G I
Sbjct: 42 WDLRKQVLNQ-------SLYEEDIKAEVTN----------VCLSKDGALLASGYSDGSIR 84
Query: 476 IFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQN 534
I+S+ +Q A F + + T ++ G D+ ++V T+ +L+GH++
Sbjct: 85 IWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRD 144
Query: 535 RITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHP 594
+IT + N L++S D + +WD ++ H QT +V + I +P
Sbjct: 145 QITSVKLLERSNHLITSSKDGFIKIWD--------TETQHCIQT-IVGHRNPIWGIDVNP 195
Query: 595 DQIHLLS-IHEGQIDVYEAPT 614
D+ L S + QI + P+
Sbjct: 196 DETRLCSCTSDNQIRFWRIPS 216
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 124/317 (39%), Gaps = 61/317 (19%)
Query: 396 YSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTN------- 446
+ H ++V+ + T ++W WQS L N + + P LV++
Sbjct: 101 FHHECPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 447 --DIAA------DPKDSISCFALRGSHLFSASGGKISIFSLETFQTLATFANPPPIATYF 498
DI+A P D I + LF + + LE +A+ P
Sbjct: 161 VWDISALRKKSVSPADDILRLTQMNTDLFGGVDAVVK-YVLEGHDRGVNWASFHPT---- 215
Query: 499 ILLPQDLFAFGFDDSSILVHCPCTKKTKA----KLKGHQNRITCLAYSLSLNVLVSSGAD 554
LP L G DD + + TKA L+GH N ++C+ + +++VS+ D
Sbjct: 216 --LP--LIVSGADDRQVKIWR--MNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
Query: 555 AQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPT 614
+ +WDA + T + + D+ +LS H ++++ A
Sbjct: 270 KSIRIWDAT-------------------KRTGIQTFRREHDRFWILSAHP-EMNLLAA-- 307
Query: 615 LNHTSQLVPDKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLELRCQINLTAYAQPG 674
H S ++ K++ +S G ++ K ++ F+ +T + ++ L +PG
Sbjct: 308 -GHDSGMIVFKLER--ERPAFSVSGDTVFY-VKDRFLRFFEFTTQK---EVQLAPIRRPG 360
Query: 675 TISLELYPLVIAAHPLE 691
++SL P ++ P E
Sbjct: 361 SVSLNQSPKTLSYSPTE 377
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 123/315 (39%), Gaps = 57/315 (18%)
Query: 396 YSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTN------- 446
+ H ++V+ + T ++W WQS L N + + P LV++
Sbjct: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 447 --DIAA------DPKDSISCFALRGSHLFSASGGKISIFSLETFQTLATFANPPPIATYF 498
DI A P D I + LF + + LE +A+ P
Sbjct: 161 VWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVK-YVLEGHDRGVNWASFHPT---- 215
Query: 499 ILLPQDLFAFGFDDSSI-LVHCPCTKKTKA-KLKGHQNRITCLAYSLSLNVLVSSGADAQ 556
LP L G DD + L TK + L+GH N ++C+ + +++VS+ D
Sbjct: 216 --LP--LIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
Query: 557 LCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLN 616
+ +WDA + T + + D+ +LS H ++++ A
Sbjct: 272 IRIWDAT-------------------KRTGIQTFRREHDRFWILSAHP-EMNLLAA---G 308
Query: 617 HTSQLVPDKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLELRCQINLTAYAQPGTI 676
H S ++ K++ +S G ++ K ++ F+ +T + ++ L +PG++
Sbjct: 309 HDSGMIVFKLER--ERPAFSVSGDTVFY-VKDRFLRFFEFTTQK---EVQLAPIRRPGSV 362
Query: 677 SLELYPLVIAAHPLE 691
SL P ++ P E
Sbjct: 363 SLNQSPKTLSYSPTE 377
>sp|P73594|Y1409_SYNY3 Uncharacterized WD repeat-containing protein slr1409
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr1409 PE=4 SV=1
Length = 326
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 56/267 (20%)
Query: 402 FLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFAL 461
L+ T +LW Q + LEE+ QP V + D + ++C
Sbjct: 104 ILITTGYDGTIRLWNLQG--ELLEEQ---------QPHRAAVADAIFSPDSQIIVTCSDD 152
Query: 462 RGSHLFSASGGKI-SIFSLETFQTLATFANPPPIATYFILLPQDLFAFGFDDSSILVHCP 520
+ +F+ G +I S+ T + LA PQ L DS L
Sbjct: 153 GQTKIFTRQGQEIASVLKSGTARNLAYH-------------PQGLLIASVSDSGSLHLIN 199
Query: 521 CTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGL 580
K + ++ Q RI + +S + L++SG + +W+ L + +H ++ +
Sbjct: 200 PNGKIEREISTGQGRINNVNFSPNGEQLLTSGINGSAKLWN------LAGELIHEYK--V 251
Query: 581 VPETTIVNHIQFHPDQIHLLSI----------HEGQIDVYEAPTLNHTSQLVPDKMDLPI 630
VP T VN QF+P L + +GQ+ +YE P +N +
Sbjct: 252 VP-TGWVNSAQFYPKGEWLATASDDGTIRFWQKDGQL-IYELPLVNAR-----------L 298
Query: 631 TYATYSCDGKCIYVSCKSGHVKVFDTS 657
T ++S DGK + + G V VF+ S
Sbjct: 299 TSLSFSPDGKQLAATSSQGQVWVFNLS 325
>sp|Q6GMD2|WDR61_XENLA WD repeat-containing protein 61 OS=Xenopus laevis GN=wdr61 PE=2
SV=1
Length = 305
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
Query: 529 LKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVN 588
L+GHQ + + S S N++ SS DA + +WD K + S G V ++
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLE-----SGKQIRSIDAGPVDAWSVA- 113
Query: 589 HIQFHPDQIHLLS-IHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCK 647
F PD HL + H G+++++ T L D I YS DGK +
Sbjct: 114 ---FSPDSQHLATGSHVGKVNIFGVETGKKEYSL--DTRGKFILSIAYSPDGKYLASGAI 168
Query: 648 SGHVKVFDTSTLELRCQINLTAYAQP 673
G + +FD +T +L L +A P
Sbjct: 169 DGIINIFDIATGKLLH--TLEGHAMP 192
>sp|Q9C270|PWP2_NEUCR Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=B18D24.40 PE=3 SV=1
Length = 899
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 119/294 (40%), Gaps = 57/294 (19%)
Query: 414 LWKWQSNKQSLEEENV--NMESQLYQPSSKLVMTNDIAADPKDSI--------------- 456
+W+WQS L+++ +M S +Y P + ++T +A D K +
Sbjct: 323 VWEWQSESYILKQQGHFDSMNSLVYSPDGQRIVT--VADDGKIKVWDTESGFCIVTFTEH 380
Query: 457 -----SC-FALRGSHLFSAS-GGKISIFSLETFQTLATFANPPPIATYFILL--PQDLFA 507
+C F+ +G+ LF++S G I + L ++ TF P ++ + + ++ A
Sbjct: 381 TSGITACEFSKKGNVLFTSSLDGSIRAWDLIRYRNFRTFTAPERLSFSCMAVDPSGEIVA 440
Query: 508 FGFDDS-SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWK 566
G DS I + T + +L GH+ ++ LA++ + +LVS D +W
Sbjct: 441 AGSVDSFDIHIWSVQTGQLLDRLSGHEGPVSSLAFAPNGGLLVSGSWDRTARIW------ 494
Query: 567 KLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHL-LSIHEGQIDVYEAPTLNHTSQL---- 621
S F + + + + V I F PD + + +S +G + + + L
Sbjct: 495 ---SIFNRTQTSEPLQLNSDVLDIAFRPDSLQIAISTLDGNLSFWSVSEAEQQAGLDGRR 551
Query: 622 -------VPDKMDLPITYAT-------YSCDGKCIYVSCKSGHVKVFDTSTLEL 661
+ D+ T YS DG C+ S ++ ++ +T+ L
Sbjct: 552 DVSGGRKIGDRRTAANVAGTKAFNTIRYSTDGSCLLAGGNSKYICLYSVTTMVL 605
>sp|Q6PBD6|WDR61_XENTR WD repeat-containing protein 61 OS=Xenopus tropicalis GN=wdr61 PE=2
SV=1
Length = 305
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 526 KAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETT 585
++ L+GHQ + + S S N++ SS DA + +WD K + + G V +
Sbjct: 57 QSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLE-----SGKQIRAIDAGPVDAWS 111
Query: 586 IVNHIQFHPDQIHLLS-IHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYV 644
+ F PD HL + H G+++++ T L D I YS DGK +
Sbjct: 112 VA----FSPDSQHLATGSHVGKVNIFGVETGKKEYSL--DTRGKFILSIAYSPDGKYLAS 165
Query: 645 SCKSGHVKVFDTSTLELRCQINLTAYAQP 673
G + +FD +T +L L +A P
Sbjct: 166 GAIDGIINIFDIATGKLLH--TLEGHAMP 192
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 455 SISCFALRGSHLFSASG---GKISIFSLETFQTLATFANPPPIATYFILLPQ-DLFAFGF 510
++ C S +G G + ++ LE + L T + P + A G
Sbjct: 65 AVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGS 124
Query: 511 DDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCS 570
DS+I + K + KGH + CLA+S L S+ D+ + +WD + K +
Sbjct: 125 VDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI-- 182
Query: 571 KFLHSFQTGLVPETTIVNHIQFHPDQIHLLS 601
T T+ VN +QFHP++ L S
Sbjct: 183 -------TEFTSHTSAVNVVQFHPNEYLLAS 206
>sp|Q6DH44|WDR83_DANRE WD repeat domain-containing protein 83 OS=Danio rerio GN=wdr83 PE=2
SV=1
Length = 315
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 512 DSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSK 571
D ++++ + + KL+GH ++ C+ ++ V++S D + WD + +
Sbjct: 88 DKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQ 147
Query: 572 FLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDLPIT 631
L Q G ++ ++ ++ S+ +G++ Y+ QL D + PIT
Sbjct: 148 ILDESQDG-------ISSLKVSEHELLTGSV-DGRVRRYDL----RMGQLQVDYIGSPIT 195
Query: 632 YATYSCDGKCIYVSCKSGHVKVFDTSTLEL 661
+S DG+C S V++ D ST E+
Sbjct: 196 CVCFSRDGQCTLSSSLDSTVRLLDKSTGEM 225
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 90/240 (37%), Gaps = 28/240 (11%)
Query: 378 RTLLLPDNSFGGRVVRLIYSHSGDF-LVALTQTATHKLWKWQSNKQSLEEENVNMESQLY 436
+T++L D + G+V R + H+G V + AT L +++ + +
Sbjct: 89 KTVILWDVA-SGQVTRKLRGHAGKVNCVQFNEEATVML-----------SGSIDGTVRCW 136
Query: 437 QPSSKLVMTNDIAADPKDSISCFALRGSHLFSAS-GGKISIFSLETFQTLATFANPPPIA 495
S+ + I + +D IS + L + S G++ + L Q + P
Sbjct: 137 DTRSRRMEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRMGQLQVDYIGSPITC 196
Query: 496 TYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNR---ITCLAYSLSLNVLVSSG 552
F Q + D + L+ T + + GH N+ + C +VL S
Sbjct: 197 VCFSRDGQCTLSSSLDSTVRLLD-KSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVL-SCS 254
Query: 553 ADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEA 612
D + WD V S L +V + FHP + LL+ EG++ V+ A
Sbjct: 255 EDGHVYYWDLV---------EGSLTLKLPVGKAVVQSLSFHPTEPRLLTSMEGRVQVWGA 305
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 459 FALRGSHLFSASGGKI-SIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGFDDSSIL 516
F G ++F+ S K ++ + T ++ F + P+ + + + G +D I
Sbjct: 617 FHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIIN 676
Query: 517 VHCPCTKKTKAKLKGH-QNRITCLAYSLSLNVLVSSGADAQLCVWD 561
V T K +++GH +N I L+YS NVL+S GAD + VWD
Sbjct: 677 VWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWD 722
>sp|A6H603|NWD1_MOUSE NACHT and WD repeat domain-containing protein 1 OS=Mus musculus
GN=Nwd1 PE=2 SV=2
Length = 1563
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 493 PIATYFILLPQDLFA----------FGFDDSSILVH-CPCTKKTKAKLKGHQNRITCLAY 541
P T++ LP+ + + +G D S+ ++ C C+K L+ H +R++C+
Sbjct: 1339 PTYTFYTQLPETIVSVAVLADYRVVYGMSDGSLFLYDCACSKVFP--LEAHGSRVSCVEV 1396
Query: 542 SLSLNVLVSSGADAQLCVWD 561
S S + VS DA LC+WD
Sbjct: 1397 SHSEQLAVSGAEDALLCLWD 1416
>sp|Q96P53|WDFY2_HUMAN WD repeat and FYVE domain-containing protein 2 OS=Homo sapiens
GN=WDFY2 PE=2 SV=2
Length = 400
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 459 FALRGSHLFSAS-GGKISIFSLE--TFQTLATFANPPPIATYFILLP--QDLFAFGFDDS 513
F + H+F G+++I LE + TF T P + LF+ D S
Sbjct: 163 FDVETRHVFIGDHSGQVTILKLEQENCTLVTTFRGHTGGVTALCWDPVQRVLFSGSSDHS 222
Query: 514 SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWD 561
I+ K T +L+GH +R+ L+Y+ L+S G D + VW+
Sbjct: 223 VIMWDIGGRKGTAIELQGHNDRVQALSYAQHTRQLISCGGDGGIVVWN 270
>sp|Q15269|PWP2_HUMAN Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1
SV=2
Length = 919
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 29/175 (16%)
Query: 414 LWKWQSNKQSLEEEN--VNMESQLYQPSSKLVMT--NDIAADPKDSIS--CFALRGSH-- 465
+W+WQS L+++ +M + Y P + ++T +D +++S CF H
Sbjct: 357 VWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
Query: 466 -----LFSASG---------GKISIFSLETFQTLATFANPPPIATYFILLPQD----LFA 507
F+A+G G + F L ++ TF +P P T F + D + +
Sbjct: 417 GVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRP--TQFSCVAVDASGEIVS 474
Query: 508 FGFDDS-SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWD 561
G DS I V T + L GH+ I+ L ++ +VL S+ D + +WD
Sbjct: 475 AGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDKTVRLWD 529
>sp|O22785|PR19B_ARATH Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana
GN=PRP19B PE=1 SV=3
Length = 525
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 475 SIFSLETFQTLATF----ANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLK 530
SI +LE F L++ N P I + IL +D+ A G D++ ++ + + + L
Sbjct: 202 SIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLT 261
Query: 531 GHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHI 590
GH ++T + + ++++++ AD + +W G + L + V +
Sbjct: 262 GHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYT------LNDHSAEVRAV 315
Query: 591 QFHPDQIHLLSIH-EGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCKSG 649
HP + +S +G Y+ + + +Q+ D ++ T A + DG +
Sbjct: 316 TVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQS 375
Query: 650 HVKVFDTSTLELRCQINLTAY 670
VK++D ++ Q N+ +
Sbjct: 376 VVKIWD-----VKSQANVAKF 391
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 36/190 (18%)
Query: 396 YSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTNDI----- 448
+ H ++V+ + T ++W WQS L N + + P LV++ +
Sbjct: 101 FHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 449 ----------AADPKDSISCFALRGSHLFSASGGKISI--FSLETFQTLATFANPPPIAT 496
+A P D + F+ S LF GG +I + LE +A+ P
Sbjct: 161 VWDIGALKKKSASPADDLMRFSQMNSDLF---GGVDAIVKYVLEGHDRGVNWASFHPT-- 215
Query: 497 YFILLPQDLFAFGFDDSSILVHCPCTKKTKA----KLKGHQNRITCLAYSLSLNVLVSSG 552
LP L G DD V +TKA L+GH N ++ + + +++VS+
Sbjct: 216 ----LP--LIVSGADDRQ--VKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNS 267
Query: 553 ADAQLCVWDA 562
D + VWDA
Sbjct: 268 EDKSIRVWDA 277
>sp|Q8BU03|PWP2_MOUSE Periodic tryptophan protein 2 homolog OS=Mus musculus GN=Pwp2 PE=1
SV=1
Length = 919
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 390 RVVRLIYSHSGDFLV-ALTQTATHKLWKWQSNKQSLEEEN--VNMESQLYQPSSKLVMT- 445
RV + + SGD++ + +W+WQS L+++ +M + Y P + ++T
Sbjct: 332 RVASVAINSSGDWIAFGCSGMGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTG 391
Query: 446 -NDIAADPKDSIS--CFALRGSH----------------LFSASGGKISIFSLETFQTLA 486
+D +++S CF H + S+ G + F L ++
Sbjct: 392 GDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTTTGHVIVTSSLDGTVRAFDLHRYRNFR 451
Query: 487 TFANPPPIATYFILLPQD----LFAFGFDDS-SILVHCPCTKKTKAKLKGHQNRITCLAY 541
TF +P P T F + D + + G DS I V T + L GH+ ++ L +
Sbjct: 452 TFTSPRP--TQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPVSGLCF 509
Query: 542 SLSLNVLVSSGADAQLCVWD 561
+ ++L S+ D + +WD
Sbjct: 510 NPMKSILASASWDKTVRLWD 529
>sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1
Length = 483
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 69/174 (39%), Gaps = 16/174 (9%)
Query: 439 SSKLVMTNDIAADPKDSISCFALRGSHL-FSASGGKISIFSLETFQTLATFANPPPIATY 497
SSK+ D+ A+ +ALRG+HL S GK+ I+ + T +
Sbjct: 205 SSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHR-LRVG 263
Query: 498 FILLPQDLFAFGFDDSSILVH-CPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQ 556
+ + + G D SIL C + +KL GH++ + L +S L S G D +
Sbjct: 264 ALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNR 323
Query: 557 LCVWDAVGWKKLCSKFLHSFQTGL--VPETTIVNHIQFHPDQIHLLSIHEGQID 608
L VW+ HS Q L T V I + P LL+ G D
Sbjct: 324 LFVWNQ-----------HSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTAD 366
>sp|Q4V7A0|WDR61_RAT WD repeat-containing protein 61 OS=Rattus norvegicus GN=Wdr61 PE=1
SV=1
Length = 305
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
Query: 529 LKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVN 588
L+GHQ + + S +L + SS DA + +WD K+ + S G V T+
Sbjct: 60 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ-----MKSIDAGPVDAWTLA- 113
Query: 589 HIQFHPDQIHLLS-IHEGQIDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCK 647
F PD HL + H G+++++ + L D I YS DGK +
Sbjct: 114 ---FSPDSQHLATGTHMGKVNIFGVESGKKEYSL--DTRGKFILSIAYSPDGKYLASGAI 168
Query: 648 SGHVKVFDTSTLELRCQINLTAYAQP 673
G + +FD +T +L L +A P
Sbjct: 169 DGIINIFDIATGKLLH--TLEGHAMP 192
>sp|Q5XJS5|THOC6_DANRE THO complex subunit 6 homolog OS=Danio rerio GN=thoc6 PE=2 SV=1
Length = 323
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 464 SHLFSASGGKISIFSLETF---QTLATFANPP--------PIATYFILLPQDL-FAFGFD 511
SHL SA G+IS +S T A + P P I+ P+D G
Sbjct: 71 SHLLSAGNGEISAWSWAELIKKSTKAAWTRKPNYETSLEIPEINAMIINPKDNNLIVGGG 130
Query: 512 DSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDA 562
D++I + T K+ LKGH + I CL++ ++S G D + +WD+
Sbjct: 131 DNNIHIMDMETGTFKSVLKGHTDYIHCLSFKEREGEILSGGEDGAVRIWDS 181
>sp|P62884|GBLP_LEIIN Guanine nucleotide-binding protein subunit beta-like protein
OS=Leishmania infantum GN=LinJ28.2880 PE=2 SV=1
Length = 312
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 501 LPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVW 560
L + G D++I V K + LKGH N ++ + S ++ S G D +W
Sbjct: 162 LEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLW 221
Query: 561 DAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQ 620
D ++L F+ + + +N I F P++ + E + VY+ + ++
Sbjct: 222 DLSTGEQL-------FKINV---ESPINQIAFSPNRFWMCVATERSLSVYDLESKAVIAE 271
Query: 621 LVPD--KMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLE 660
L PD K I+ A +S DG +Y K ++V+ S E
Sbjct: 272 LTPDGAKPSECISIA-WSADGNTLYSGHKDNLIRVWSISDAE 312
>sp|P62883|GBLP_LEICH Guanine nucleotide-binding protein subunit beta-like protein
OS=Leishmania chagasi PE=2 SV=1
Length = 312
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 501 LPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVW 560
L + G D++I V K + LKGH N ++ + S ++ S G D +W
Sbjct: 162 LEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLW 221
Query: 561 DAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQ 620
D ++L F+ + + +N I F P++ + E + VY+ + ++
Sbjct: 222 DLSTGEQL-------FKINV---ESPINQIAFSPNRFWMCVATERSLSVYDLESKAVIAE 271
Query: 621 LVPD--KMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLE 660
L PD K I+ A +S DG +Y K ++V+ S E
Sbjct: 272 LTPDGAKPSECISIA-WSADGNTLYSGHKDNLIRVWSISDAE 312
>sp|Q25306|GBLP_LEIMA Guanine nucleotide-binding protein subunit beta-like protein
OS=Leishmania major PE=2 SV=1
Length = 312
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 501 LPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVW 560
L + G D++I V K + LKGH N ++ + S ++ S G D +W
Sbjct: 162 LEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLW 221
Query: 561 DAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQ 620
D ++L F+ + + +N I F P++ + E + VY+ + ++
Sbjct: 222 DLSTGEQL-------FKINV---ESPINQIGFSPNRFWMCVATERSLSVYDLESKAVIAE 271
Query: 621 LVPD--KMDLPITYATYSCDGKCIYVSCKSGHVKVFDTSTLE 660
L PD K I+ A +S DG +Y K ++V+ S E
Sbjct: 272 LTPDGAKPSECISIA-WSADGNTLYSGHKDNLIRVWSISDAE 312
>sp|Q8BUB4|WDFY2_MOUSE WD repeat and FYVE domain-containing protein 2 OS=Mus musculus
GN=Wdfy2 PE=2 SV=2
Length = 400
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 459 FALRGSHLFSAS-GGKISIFSLE--TFQTLATFANPPPIATYFILLP--QDLFAFGFDDS 513
F + H+F G+++I LE L +F T P + LF+ D S
Sbjct: 163 FDVETRHVFIGDHSGQVTILKLEQENCTLLTSFRGHTGGVTALCWDPVQRVLFSGSSDHS 222
Query: 514 SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWD 561
I+ K T +L+GH +++ L+Y+ L+S G D + VW+
Sbjct: 223 VIMWDIGGRKGTAIELQGHNDKVQALSYAQHTRQLISCGGDGGIVVWN 270
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
Query: 505 LFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVG 564
L G DD ++ V T K+ LKGH N + C ++ N++VS D + +WD
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 187
Query: 565 WKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLL-SIHEGQIDVYEAPTLNHTSQLVP 623
K L + HS V+ + F+ D ++ S ++G +++ + L+
Sbjct: 188 GKCLKTLPAHS---------DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 238
Query: 624 DKMDLPITYATYSCDGKCIYVSCKSGHVKVFDTS 657
D + P+++ +S +GK I + +K++D S
Sbjct: 239 DD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYS 271
>sp|Q5SUS0|FBW10_MOUSE F-box/WD repeat-containing protein 10 OS=Mus musculus GN=Fbxw10
PE=2 SV=1
Length = 1030
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 453 KDSISCFALRGSHLFS-ASGGKISIFSLETFQTLATFANPPPIATYFILLPQDLFAFGFD 511
+ +I+C + + L S A G++ + +ET + L TF + PI I + +
Sbjct: 510 QGTITCLDVYKNRLVSGAKDGQVKEWDIETGKCLKTFKHKDPILAAKI--SETYIVSSCE 567
Query: 512 DSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLC 569
+ V T + + L GH+ + CL ++ LVS GAD + W VG + C
Sbjct: 568 RGIVKVWHVVTAQLQKTLTGHEGAVKCLFFNEWH--LVSGGADGLVMAWSMVGKYERC 623
>sp|Q5RFQ3|PWP2_PONAB Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2
SV=1
Length = 918
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 29/175 (16%)
Query: 414 LWKWQSNKQSLEEEN--VNMESQLYQPSSKLVMT--NDIAADPKDSIS--CFALRGSH-- 465
+W+WQS L+++ +M + Y P + ++T +D +++S CF H
Sbjct: 354 VWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 413
Query: 466 -----LFSASG---------GKISIFSLETFQTLATFANPPPIATYFILLPQD----LFA 507
F+A+G G + F L ++ TF +P P T F + D + +
Sbjct: 414 GVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRP--TQFSCVAVDASGEIVS 471
Query: 508 FGFDDS-SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWD 561
G DS I V T + L GH+ I+ L ++ ++L S+ D +WD
Sbjct: 472 AGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSILASASWDKTERLWD 526
>sp|O74184|WAT1_SCHPO WD repeat-containing protein wat1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=wat1 PE=1 SV=1
Length = 314
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 529 LKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVN 588
+GH N +T +A+ L +S D + VWD + + H + VN
Sbjct: 79 FEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRA-PSVQRNYDHK---------SPVN 128
Query: 589 HIQFHPDQIHLLSIHE-GQIDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCK 647
+ HP+Q LLS + G++ ++ + T +L+P++ D+P++ T DG +
Sbjct: 129 DLLIHPNQGELLSCDQSGRVRAWDLGENSCTHELIPEE-DVPMSSITVGSDGSMLIAGNN 187
Query: 648 SGHVKVF 654
G+ V+
Sbjct: 188 KGNCYVW 194
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 547 VLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQ 606
+LVSSG D + W+A+ +CS+ + + VN + PD+ L +
Sbjct: 12 LLVSSGYDHTIRFWEAL--SGICSRTIQHADSQ-------VNRLCISPDKKFLAAAGNPH 62
Query: 607 IDVYEAPTLNHTSQLVPDKMDLPITYATYSCDGKCIYVSCKSGHVKVFD 655
+ +Y+ T + + + +T + CDGK + S + G VKV+D
Sbjct: 63 VRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWD 111
>sp|Q9BRX9|WDR83_HUMAN WD repeat domain-containing protein 83 OS=Homo sapiens GN=WDR83
PE=1 SV=1
Length = 315
Score = 40.8 bits (94), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 509 GFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKL 568
G D ++++ + + K +GH ++ + ++ V++S D+ + WD +
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPE 144
Query: 569 CSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDL 628
+ L + G V+ ++ +I S+ +G++ Y+ QL D +
Sbjct: 145 PVQTLDEARDG-------VSSVKVSDHEILAGSV-DGRVRRYDL----RMGQLFSDYVGS 192
Query: 629 PITYATYSCDGKCIYVSCKSGHVKVFDTSTLEL 661
PIT +S DG+C VS +++ D T EL
Sbjct: 193 PITCTCFSRDGQCTLVSSLDSTLRLLDKDTGEL 225
>sp|Q4IBR4|HIR1_GIBZE Protein HIR1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=HIR1 PE=3 SV=1
Length = 1046
Score = 40.8 bits (94), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 29/113 (25%)
Query: 459 FALRGSHLFSASGGKI-SIFSLETFQTLATFAN--PPPIATYFILLPQDLFAFGFDDSSI 515
F+ G +L S + KI ++ L+ ATF PPPI +
Sbjct: 78 FSPNGRYLASGADDKIICVYHLDKNPPAATFGTNEPPPIENW------------------ 119
Query: 516 LVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKL 568
KT +L GH N + LA+S ++LVS G D+++ VW ++KL
Sbjct: 120 --------KTYKRLIGHDNDVQDLAWSYDSSILVSVGLDSKVVVWSGHTFEKL 164
>sp|Q12220|UTP12_YEAST U3 small nucleolar RNA-associated protein 12 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DIP2 PE=1
SV=1
Length = 943
Score = 40.4 bits (93), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 504 DLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAV 563
DL A G+ D I V +K GH+ IT L + + L+S D+ + VWD V
Sbjct: 92 DLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLV 151
Query: 564 G 564
G
Sbjct: 152 G 152
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 463 GSHLFSASGGK-ISIFSLETFQTLATFANPPPIATYFILLPQD-LFAFGFDDSSILVHCP 520
GS L S S + + ++ + + + L TF + P + A G D ++ +
Sbjct: 1212 GSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDI 1271
Query: 521 CTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGL 580
+ K +GH N + +A++ ++L S D + +W+ SK LH+FQ
Sbjct: 1272 SSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEIS-----SSKCLHTFQ--- 1323
Query: 581 VPETTIVNHIQFHPDQIHLLSIHEGQ 606
T+ V+ + F PD L S + Q
Sbjct: 1324 -GHTSWVSSVTFSPDGTMLASGSDDQ 1348
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 13/137 (9%)
Query: 469 ASGGK---ISIFSLETFQTLATFANPPPIATYFILLPQDL-FAFGFDDSSILVHCPCTKK 524
ASGG + ++ + + L T + + P + A G D + + +KK
Sbjct: 1090 ASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKK 1149
Query: 525 TKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPET 584
L+GH N + +A+S L S D + +WD SK L+ Q T
Sbjct: 1150 CLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDIS-----SSKCLYILQ----GHT 1200
Query: 585 TIVNHIQFHPDQIHLLS 601
+ VN + F+PD L S
Sbjct: 1201 SWVNSVVFNPDGSTLAS 1217
>sp|Q5BLX8|WDR83_RAT WD repeat domain-containing protein 83 OS=Rattus norvegicus
GN=Wdr83 PE=1 SV=1
Length = 315
Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 509 GFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKL 568
G D ++++ T + K +GH ++ + ++ V++S D+ + WD K
Sbjct: 85 GGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPE 144
Query: 569 CSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDL 628
+ L + G ++ ++ +I S+ +G++ Y+ Q+ D +
Sbjct: 145 PVQTLDEARDG-------ISSVKVSDHEILAGSV-DGRVRRYDL----RMGQVTSDYVGS 192
Query: 629 PITYATYSCDGKCIYVSCKSGHVKVFDTSTLEL 661
PIT +S DG+C +S +++ D T EL
Sbjct: 193 PITCTCFSRDGQCTLISSLDSTLRLLDKDTGEL 225
>sp|Q5SP67|WDR26_DANRE WD repeat-containing protein 26 OS=Danio rerio GN=wdr26 PE=1 SV=1
Length = 576
Score = 40.4 bits (93), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 1 MNGEWEKAEKYLSAFTKLDDS-NHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVF 59
M GEW+KAE L+ L S N +M F L + KY E L + EA + R +L
Sbjct: 96 MEGEWDKAENDLNELKALMHSPNAIVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPL 155
Query: 60 SVSQNRIDCELAELLA--LKDLRENEQLSGYTNATSSRAKLIDSLK 103
+ +RI L+ +DL+ + G SR +L+D L+
Sbjct: 156 KYNTDRIHVLSGYLMCSHAEDLKAKAEWEG--KGAGSRCRLLDKLQ 199
Score = 37.7 bits (86), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 140 ETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFD---INYFREYITSGEWDNAEKYLSA 196
+ +E++I LI Q L+ +T+ L QE+ + FR ++ GEWD AE L+
Sbjct: 50 QAEEDVIRLIGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNE 109
Query: 197 FTN-MNDNTYSAKMFSQIQRQKYLEAVD 223
M+ +M + +QKYLE ++
Sbjct: 110 LKALMHSPNAIVRMKFLLLQQKYLEYLE 137
>sp|Q1LV15|WDR69_DANRE Outer row dynein assembly protein 16 homolog OS=Danio rerio
GN=wdr69 PE=2 SV=2
Length = 415
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 27/180 (15%)
Query: 400 GDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSIS 457
GD + + T KLW ++ K + + + P S LV T + K
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAK---- 202
Query: 458 CFALRGSHLFSASGGKISIFSLETFQTLATFAN--PPPIATYFILLPQDLFAFGFDDSSI 515
++ +E+ + ++T A I+ F L FD ++I
Sbjct: 203 ------------------LWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAI 244
Query: 516 LVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHS 575
L P +K L GH+ I+C+ ++ +++ ++ D VWDA G + L + H+
Sbjct: 245 LWDVPSGRKVHV-LSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHN 303
>sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2
Length = 1821
Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 455 SISC--FALRGSHLFSASGG-KISIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGF 510
S+ C F G +F+ S + I++ + + LAT + I+ + + A G
Sbjct: 185 SVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGS 244
Query: 511 DDSSILVHCPCTKKTKAKLKGHQNRITCLAYSL----SLNVLVSSGADAQLC--VWDA-- 562
D I V C T A L+GH IT L +S S L S+GAD +C +WDA
Sbjct: 245 CDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGT 304
Query: 563 ---------------VGWKKLCSKFLHSFQTGLVPETTIVNHI-------QFHPDQIHLL 600
G + +CS F G+ T +HI P++I L
Sbjct: 305 LKINPRPAKFTERPRPGVQMICSSFSAG---GMFLATGSTDHIIRVYFFGSGQPEKISEL 361
Query: 601 SIHEGQID 608
H ++D
Sbjct: 362 EFHTDKVD 369
>sp|Q8VDD9|PHIP_MOUSE PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2
Length = 1821
Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 455 SISC--FALRGSHLFSASGG-KISIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGF 510
S+ C F G +F+ S + I++ + + LAT + I+ + + A G
Sbjct: 185 SVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGS 244
Query: 511 DDSSILVHCPCTKKTKAKLKGHQNRITCLAYSL----SLNVLVSSGADAQLC--VWDA-- 562
D I V C T A L+GH IT L +S S L S+GAD +C +WDA
Sbjct: 245 CDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGT 304
Query: 563 ---------------VGWKKLCSKFLHSFQTGLVPETTIVNHI-------QFHPDQIHLL 600
G + +CS F G+ T +HI P++I L
Sbjct: 305 LKINPRPTKFTERPRPGVQMICSSFSAG---GMFLATGSTDHIIRVYFFGSGQPEKISEL 361
Query: 601 SIHEGQID 608
H ++D
Sbjct: 362 EFHTDKVD 369
>sp|P25635|PWP2_YEAST Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2
Length = 923
Score = 40.0 bits (92), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 459 FALRGSHLFSAS-GGKISIFSLETFQTLATFANPPPIATYFILLPQD-----LFAFGFDD 512
FA RG +FS+S G + + L ++ TF I F L D + A D+
Sbjct: 395 FAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQ--FNCLAVDPSGEVVCAGSLDN 452
Query: 513 SSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVG 564
I V T + L GH+ ++CL++S +VL S+ D + +W G
Sbjct: 453 FDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFG 504
>sp|Q58D20|NLE1_BOVIN Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=3
Length = 486
Score = 40.0 bits (92), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 524 KTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPE 583
+ + L+GH + +A+S + L S D + WD L ++ H G
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD------LSTETPHFTCQG---H 156
Query: 584 TTIVNHIQFHPDQIHLLS-IHEGQIDVYEAPTLNHTSQLVPD--KMDLPITYATYSCDGK 640
V I + PD L S GQI +++ T + + K +++ + +
Sbjct: 157 RHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPE 216
Query: 641 CIYV--SCKSGHVKVFDTSTLELRCQINLTAYAQ 672
C YV S K G V+V+DT+ RC+ LT +AQ
Sbjct: 217 CRYVASSSKDGSVRVWDTTA--GRCERTLTGHAQ 248
>sp|Q9DAJ4|WDR83_MOUSE WD repeat domain-containing protein 83 OS=Mus musculus GN=Wdr83
PE=1 SV=1
Length = 315
Score = 40.0 bits (92), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 509 GFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKL 568
G D ++++ T + K +GH ++ + ++ V++S D+ + WD K
Sbjct: 85 GGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPE 144
Query: 569 CSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQLVPDKMDL 628
+ L + G ++ ++ +I S+ +G++ Y+ Q+ D +
Sbjct: 145 PVQTLDEARDG-------ISSVKVSDHEILAGSV-DGRVRRYDL----RMGQVSSDYVGS 192
Query: 629 PITYATYSCDGKCIYVSCKSGHVKVFDTSTLEL 661
PIT +S DG+C +S +++ D T EL
Sbjct: 193 PITCTCFSRDGQCTLISSLDSTLRLLDKDTGEL 225
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 40.0 bits (92), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 56/230 (24%)
Query: 396 YSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDS 455
+ HSG L + + T KLW +Q E M + SS +M N
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGF-----ECIRTMHGHDHNVSSVAIMPN--------- 203
Query: 456 ISCFALRGSHLFSASGGK-ISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDD 512
G H+ SAS K I ++ ++T + TF + QD L A +D
Sbjct: 204 -------GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 513 SSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLN--------------------VLVSSG 552
++ V TK+ KA+L+ H++ + C++++ + L+S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGS 315
Query: 553 ADAQLCVWD-AVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLS 601
D + +WD ++G +C LV V +QFHP +LS
Sbjct: 316 RDKTIKMWDISIG---MC-------LMTLVGHDNWVRGVQFHPGGKFILS 355
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 40.0 bits (92), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 458 CFALRGSHLFSASGG-KISIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGFDDSSI 515
F G +F+ S + I+S + L+T + I+ + + A G D I
Sbjct: 193 AFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKII 252
Query: 516 LVHCPCTKKTKAKLKGHQNRITCLAYSL----SLNVLVSSGADAQLCVW 560
V C T A L+GH IT L +S S +VS+GAD +C W
Sbjct: 253 RVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFW 301
>sp|Q7K0L4|WDR26_DROME WD repeat-containing protein 26 homolog OS=Drosophila melanogaster
GN=CG7611 PE=1 SV=1
Length = 630
Score = 40.0 bits (92), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 140 ETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFD---INYFREYITSGEWDNAEKYLSA 196
++ +E+I LI Q+L++ +++ L E+ + + FRE++ G+W A+ L
Sbjct: 95 KSNQEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVLMGDWSKADSDLKD 154
Query: 197 FTNMNDNTYSAKMFSQ---IQRQKYLEAVDRQQKLPSDFAERAHL 238
+ DN A + + QKYLE +D L + R+ L
Sbjct: 155 LEPLIDNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVLRSEL 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 266,556,782
Number of Sequences: 539616
Number of extensions: 11060306
Number of successful extensions: 38689
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 271
Number of HSP's that attempted gapping in prelim test: 37555
Number of HSP's gapped (non-prelim): 1294
length of query: 737
length of database: 191,569,459
effective HSP length: 125
effective length of query: 612
effective length of database: 124,117,459
effective search space: 75959884908
effective search space used: 75959884908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)