Query 004684
Match_columns 737
No_of_seqs 331 out of 2181
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 02:31:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004684.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004684hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 8E-50 2.7E-54 470.0 46.0 464 12-491 76-660 (662)
2 2xag_A Lysine-specific histone 100.0 1.1E-49 3.8E-54 475.2 44.1 467 12-494 247-834 (852)
3 4gut_A Lysine-specific histone 100.0 1.1E-48 3.8E-53 464.0 42.4 469 9-487 298-775 (776)
4 1rsg_A FMS1 protein; FAD bindi 100.0 1.2E-44 4.2E-49 414.5 40.5 429 47-492 8-510 (516)
5 1s3e_A Amine oxidase [flavin-c 100.0 3.1E-44 1.1E-48 411.6 39.0 440 47-509 4-473 (520)
6 1b37_A Protein (polyamine oxid 100.0 5.1E-41 1.8E-45 380.2 38.1 432 47-493 4-462 (472)
7 2vvm_A Monoamine oxidase N; FA 100.0 1.8E-41 6.1E-46 386.0 33.0 415 47-493 39-489 (495)
8 2yg5_A Putrescine oxidase; oxi 100.0 8.5E-42 2.9E-46 384.0 29.9 419 47-490 5-452 (453)
9 2iid_A L-amino-acid oxidase; f 100.0 4.3E-39 1.5E-43 366.7 39.3 421 47-491 33-486 (498)
10 3k7m_X 6-hydroxy-L-nicotine ox 100.0 7.2E-39 2.5E-43 357.7 34.7 402 48-489 2-426 (431)
11 2jae_A L-amino acid oxidase; o 100.0 2.2E-37 7.5E-42 351.7 38.7 425 46-491 10-487 (489)
12 3i6d_A Protoporphyrinogen oxid 100.0 3E-37 1E-41 347.6 28.7 407 47-489 5-468 (470)
13 2ivd_A PPO, PPOX, protoporphyr 100.0 1.2E-36 4.2E-41 344.3 29.4 412 47-493 16-477 (478)
14 1sez_A Protoporphyrinogen oxid 100.0 8.6E-36 2.9E-40 339.8 24.1 414 47-492 13-496 (504)
15 3ayj_A Pro-enzyme of L-phenyla 100.0 3.2E-35 1.1E-39 341.9 25.4 258 236-496 336-686 (721)
16 3lov_A Protoporphyrinogen oxid 100.0 7.1E-35 2.4E-39 329.7 26.0 407 47-494 4-470 (475)
17 3nks_A Protoporphyrinogen oxid 100.0 7.9E-34 2.7E-38 321.0 19.0 403 48-487 3-472 (477)
18 4dgk_A Phytoene dehydrogenase; 100.0 3.9E-32 1.3E-36 309.2 31.8 417 48-494 2-496 (501)
19 3ka7_A Oxidoreductase; structu 100.0 1.4E-32 4.8E-37 306.0 25.9 397 48-486 1-424 (425)
20 4gde_A UDP-galactopyranose mut 100.0 8.6E-32 2.9E-36 306.8 26.3 408 47-487 10-477 (513)
21 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 6.4E-31 2.2E-35 284.6 25.8 325 48-488 2-341 (342)
22 3nrn_A Uncharacterized protein 100.0 1.7E-29 5.7E-34 281.3 25.1 386 48-485 1-403 (421)
23 2b9w_A Putative aminooxidase; 100.0 6E-29 2.1E-33 276.9 19.2 396 47-486 6-423 (424)
24 4dsg_A UDP-galactopyranose mut 100.0 9E-28 3.1E-32 272.4 27.5 409 47-486 9-452 (484)
25 1yvv_A Amine oxidase, flavin-c 99.9 2.1E-25 7.2E-30 239.8 30.1 322 48-493 3-331 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 1.4E-23 4.7E-28 232.3 5.9 251 47-336 7-274 (399)
27 1i8t_A UDP-galactopyranose mut 99.8 2E-20 6.8E-25 204.6 17.9 250 48-337 2-261 (367)
28 2bi7_A UDP-galactopyranose mut 99.8 1.4E-20 4.8E-25 207.0 14.0 243 47-333 3-260 (384)
29 2bcg_G Secretory pathway GDP d 99.8 2.3E-18 8E-23 193.5 25.0 242 46-296 10-299 (453)
30 3hdq_A UDP-galactopyranose mut 99.8 4.1E-19 1.4E-23 195.1 16.4 248 46-337 28-289 (397)
31 3kkj_A Amine oxidase, flavin-c 99.8 8.5E-17 2.9E-21 163.8 26.3 59 47-112 2-60 (336)
32 2e1m_A L-glutamate oxidase; L- 99.7 1.3E-16 4.5E-21 173.9 21.9 86 46-132 43-132 (376)
33 1d5t_A Guanine nucleotide diss 99.7 1.5E-16 5E-21 177.7 19.7 242 47-297 6-290 (433)
34 2e1m_C L-glutamate oxidase; L- 99.6 2E-16 6.9E-21 155.1 7.4 120 370-495 37-158 (181)
35 3p1w_A Rabgdi protein; GDI RAB 99.6 4.8E-15 1.6E-19 165.9 15.5 240 46-295 19-312 (475)
36 1vg0_A RAB proteins geranylger 99.4 6.2E-11 2.1E-15 136.5 26.9 85 237-337 368-461 (650)
37 3oz2_A Digeranylgeranylglycero 99.2 5.3E-10 1.8E-14 121.6 18.3 38 47-84 4-41 (397)
38 3ihg_A RDME; flavoenzyme, anth 99.1 7.5E-10 2.6E-14 126.7 15.0 37 47-83 5-41 (535)
39 3dme_A Conserved exported prot 99.0 1.2E-09 4E-14 117.8 14.3 40 47-86 4-43 (369)
40 3v76_A Flavoprotein; structura 99.0 2.4E-09 8.4E-14 118.5 16.4 41 46-86 26-66 (417)
41 3ps9_A TRNA 5-methylaminomethy 99.0 1.3E-09 4.6E-14 128.2 14.0 42 256-297 431-473 (676)
42 3dje_A Fructosyl amine: oxygen 99.0 1.8E-09 6.1E-14 120.0 13.7 40 47-86 6-46 (438)
43 3nyc_A D-arginine dehydrogenas 99.0 1.6E-09 5.4E-14 117.5 12.9 42 256-297 168-209 (381)
44 3pvc_A TRNA 5-methylaminomethy 99.0 4E-09 1.4E-13 124.4 15.4 41 46-86 263-303 (689)
45 3cgv_A Geranylgeranyl reductas 98.9 2E-08 6.9E-13 109.5 19.4 37 48-84 5-41 (397)
46 1ryi_A Glycine oxidase; flavop 98.9 4.2E-09 1.4E-13 114.5 13.9 40 45-84 15-54 (382)
47 2e1m_B L-glutamate oxidase; L- 98.9 6.1E-11 2.1E-15 108.6 -1.1 107 281-406 3-110 (130)
48 3rp8_A Flavoprotein monooxygen 98.9 3.1E-09 1.1E-13 116.9 11.7 40 257-296 140-180 (407)
49 4at0_A 3-ketosteroid-delta4-5a 98.9 1.5E-08 5.1E-13 115.2 17.6 41 46-86 40-80 (510)
50 2qa2_A CABE, polyketide oxygen 98.9 4.7E-08 1.6E-12 110.8 21.0 39 45-83 10-48 (499)
51 2qa1_A PGAE, polyketide oxygen 98.9 3.7E-08 1.3E-12 111.6 18.2 39 45-83 9-47 (500)
52 3nix_A Flavoprotein/dehydrogen 98.9 6.5E-08 2.2E-12 106.6 19.6 36 47-82 5-40 (421)
53 3fmw_A Oxygenase; mithramycin, 98.9 6.1E-08 2.1E-12 111.6 19.9 37 46-82 48-84 (570)
54 2gqf_A Hypothetical protein HI 98.8 1.6E-08 5.6E-13 111.3 13.5 40 47-86 4-43 (401)
55 2uzz_A N-methyl-L-tryptophan o 98.8 9.2E-09 3.1E-13 111.4 11.1 39 47-85 2-40 (372)
56 2oln_A NIKD protein; flavoprot 98.8 5.3E-08 1.8E-12 106.5 16.9 50 247-296 157-207 (397)
57 2gf3_A MSOX, monomeric sarcosi 98.8 5E-08 1.7E-12 106.1 16.4 42 256-297 164-205 (389)
58 2i0z_A NAD(FAD)-utilizing dehy 98.8 1.4E-08 4.7E-13 113.5 11.9 40 46-85 25-64 (447)
59 2gag_B Heterotetrameric sarcos 98.8 2.2E-08 7.6E-13 109.6 13.0 39 45-84 19-59 (405)
60 2vou_A 2,6-dihydroxypyridine h 98.8 2.2E-08 7.6E-13 109.8 12.9 44 255-298 110-154 (397)
61 1y56_B Sarcosine oxidase; dehy 98.8 3.6E-08 1.2E-12 107.2 14.5 41 256-296 163-204 (382)
62 3i3l_A Alkylhalidase CMLS; fla 98.8 5.8E-08 2E-12 112.1 16.6 37 47-83 23-59 (591)
63 1qo8_A Flavocytochrome C3 fuma 98.8 1.5E-07 5.3E-12 108.2 19.2 40 46-85 120-159 (566)
64 3e1t_A Halogenase; flavoprotei 98.8 2.7E-07 9.3E-12 104.8 20.9 35 47-81 7-41 (512)
65 4ap3_A Steroid monooxygenase; 98.8 1.5E-08 5.2E-13 116.1 10.4 47 46-92 20-66 (549)
66 1y0p_A Fumarate reductase flav 98.7 1.4E-07 4.6E-12 108.8 17.9 40 47-86 126-165 (571)
67 4a9w_A Monooxygenase; baeyer-v 98.7 3.2E-08 1.1E-12 105.9 10.0 39 48-86 4-42 (357)
68 3nlc_A Uncharacterized protein 98.7 3.6E-08 1.2E-12 112.4 9.6 42 46-87 106-147 (549)
69 2xdo_A TETX2 protein; tetracyc 98.7 5.3E-08 1.8E-12 106.8 10.6 52 247-298 128-183 (398)
70 1w4x_A Phenylacetone monooxyge 98.7 9.5E-08 3.2E-12 109.4 12.7 41 47-87 16-56 (542)
71 3gwf_A Cyclohexanone monooxyge 98.6 6.2E-08 2.1E-12 110.8 10.9 46 47-92 8-54 (540)
72 4hb9_A Similarities with proba 98.6 2.3E-07 7.8E-12 101.3 14.1 50 248-297 113-166 (412)
73 2x3n_A Probable FAD-dependent 98.6 1.1E-07 3.9E-12 104.1 10.7 49 249-297 113-166 (399)
74 3da1_A Glycerol-3-phosphate de 98.6 6.9E-08 2.3E-12 111.0 9.3 39 47-85 18-56 (561)
75 1pj5_A N,N-dimethylglycine oxi 98.6 2E-07 6.8E-12 112.2 12.7 36 47-82 4-40 (830)
76 3uox_A Otemo; baeyer-villiger 98.6 6.2E-08 2.1E-12 110.9 7.4 41 47-87 9-49 (545)
77 3c96_A Flavin-containing monoo 98.5 2.1E-07 7.2E-12 102.5 11.2 37 47-83 4-41 (410)
78 2zbw_A Thioredoxin reductase; 98.5 1.1E-07 3.7E-12 101.3 8.3 40 47-86 5-44 (335)
79 2gv8_A Monooxygenase; FMO, FAD 98.5 1.9E-07 6.3E-12 104.2 10.3 40 47-86 6-47 (447)
80 3f8d_A Thioredoxin reductase ( 98.5 1.7E-07 5.9E-12 98.7 9.5 38 47-86 15-52 (323)
81 1d4d_A Flavocytochrome C fumar 98.5 1.9E-06 6.6E-11 99.2 17.8 40 47-86 126-165 (572)
82 3d1c_A Flavin-containing putat 98.4 6.8E-07 2.3E-11 96.4 11.6 39 47-86 4-43 (369)
83 3fpz_A Thiazole biosynthetic e 98.4 1.1E-07 3.8E-12 101.4 3.6 41 47-87 65-107 (326)
84 2wdq_A Succinate dehydrogenase 98.3 6.9E-06 2.4E-10 94.8 17.6 38 47-84 7-44 (588)
85 2r0c_A REBC; flavin adenine di 98.3 3.7E-07 1.3E-11 104.7 6.8 37 47-83 26-62 (549)
86 2h88_A Succinate dehydrogenase 98.3 9.4E-06 3.2E-10 94.1 17.7 38 47-84 18-55 (621)
87 4gcm_A TRXR, thioredoxin reduc 98.3 3.7E-07 1.2E-11 96.4 4.8 39 47-86 6-44 (312)
88 4fk1_A Putative thioredoxin re 98.2 6.4E-07 2.2E-11 94.3 4.6 39 46-85 5-43 (304)
89 3itj_A Thioredoxin reductase 1 98.1 8.2E-07 2.8E-11 94.2 3.6 43 45-87 20-66 (338)
90 4a5l_A Thioredoxin reductase; 98.1 1.2E-06 4E-11 92.3 3.7 37 47-84 4-40 (314)
91 3o0h_A Glutathione reductase; 98.1 1.6E-06 5.3E-11 97.8 4.3 40 46-86 25-64 (484)
92 1jnr_A Adenylylsulfate reducta 98.1 8.5E-05 2.9E-09 86.6 19.1 35 47-81 22-60 (643)
93 3ab1_A Ferredoxin--NADP reduct 98.1 1.7E-06 5.9E-11 93.1 4.3 40 47-86 14-53 (360)
94 1c0p_A D-amino acid oxidase; a 98.1 3E-06 1E-10 91.4 5.9 35 47-81 6-40 (363)
95 3lzw_A Ferredoxin--NADP reduct 98.1 2.2E-06 7.4E-11 90.6 4.7 39 48-86 8-46 (332)
96 3urh_A Dihydrolipoyl dehydroge 98.0 2.1E-06 7E-11 97.0 4.5 40 47-86 25-64 (491)
97 1rp0_A ARA6, thiazole biosynth 98.0 2.2E-06 7.6E-11 89.5 4.1 38 48-85 40-78 (284)
98 2vdc_G Glutamate synthase [NAD 98.0 3.5E-06 1.2E-10 94.2 6.0 41 46-86 121-161 (456)
99 3cty_A Thioredoxin reductase; 98.0 2.3E-06 7.9E-11 90.4 4.3 39 47-86 16-54 (319)
100 3r9u_A Thioredoxin reductase; 98.0 2.1E-06 7.2E-11 90.0 3.4 39 47-86 4-43 (315)
101 4dna_A Probable glutathione re 98.0 2.5E-06 8.4E-11 95.6 3.8 39 47-86 5-43 (463)
102 3qfa_A Thioredoxin reductase 1 98.0 3.7E-06 1.3E-10 95.6 5.2 55 23-80 11-65 (519)
103 3jsk_A Cypbp37 protein; octame 98.0 3.6E-06 1.2E-10 90.0 4.5 40 47-86 79-120 (344)
104 3l8k_A Dihydrolipoyl dehydroge 98.0 3E-06 1E-10 95.0 4.0 40 47-86 4-43 (466)
105 3g3e_A D-amino-acid oxidase; F 98.0 3E-06 1E-10 90.9 3.7 37 48-84 1-43 (351)
106 2q7v_A Thioredoxin reductase; 98.0 3.8E-06 1.3E-10 88.9 4.4 39 47-86 8-46 (325)
107 1mo9_A ORF3; nucleotide bindin 98.0 5.1E-06 1.8E-10 94.5 5.6 41 46-86 42-82 (523)
108 2qae_A Lipoamide, dihydrolipoy 97.9 3.7E-06 1.3E-10 94.2 4.2 40 47-86 2-41 (468)
109 3alj_A 2-methyl-3-hydroxypyrid 97.9 5.9E-06 2E-10 89.7 5.4 38 47-84 11-48 (379)
110 3lad_A Dihydrolipoamide dehydr 97.9 4.8E-06 1.7E-10 93.5 4.9 40 47-86 3-42 (476)
111 3k30_A Histamine dehydrogenase 97.9 6.2E-06 2.1E-10 97.1 5.8 44 45-88 389-432 (690)
112 3dk9_A Grase, GR, glutathione 97.9 3.6E-06 1.2E-10 94.6 3.5 40 46-86 19-58 (478)
113 1dxl_A Dihydrolipoamide dehydr 97.9 6.2E-06 2.1E-10 92.4 4.8 40 47-86 6-45 (470)
114 2qcu_A Aerobic glycerol-3-phos 97.9 7.1E-06 2.4E-10 92.8 5.3 37 47-83 3-39 (501)
115 3fbs_A Oxidoreductase; structu 97.9 8.4E-06 2.9E-10 84.6 5.3 36 48-83 3-38 (297)
116 2gjc_A Thiazole biosynthetic e 97.9 6.1E-06 2.1E-10 87.7 4.1 39 48-86 66-106 (326)
117 3c4n_A Uncharacterized protein 97.9 5.9E-06 2E-10 90.8 4.0 37 47-83 36-74 (405)
118 2yqu_A 2-oxoglutarate dehydrog 97.9 6E-06 2.1E-10 92.1 4.1 39 48-86 2-40 (455)
119 2q0l_A TRXR, thioredoxin reduc 97.9 7.5E-06 2.6E-10 85.9 4.6 38 48-86 2-40 (311)
120 2a87_A TRXR, TR, thioredoxin r 97.9 7.5E-06 2.6E-10 87.2 4.4 39 46-85 13-51 (335)
121 3axb_A Putative oxidoreductase 97.8 5.4E-06 1.8E-10 92.1 3.3 38 47-84 23-61 (448)
122 2rgh_A Alpha-glycerophosphate 97.8 9.7E-06 3.3E-10 93.2 5.4 38 47-84 32-69 (571)
123 2cul_A Glucose-inhibited divis 97.8 1.1E-05 3.6E-10 81.7 5.0 34 47-80 3-36 (232)
124 3c4a_A Probable tryptophan hyd 97.8 1E-05 3.5E-10 88.0 5.3 35 48-82 1-37 (381)
125 1k0i_A P-hydroxybenzoate hydro 97.8 8.8E-06 3E-10 88.7 4.7 36 47-82 2-37 (394)
126 3dgz_A Thioredoxin reductase 2 97.8 7.7E-06 2.6E-10 92.2 4.3 33 46-78 5-37 (488)
127 1o94_A Tmadh, trimethylamine d 97.8 1.1E-05 3.6E-10 95.7 5.6 43 45-87 387-429 (729)
128 1v59_A Dihydrolipoamide dehydr 97.8 6.6E-06 2.2E-10 92.4 3.6 40 47-86 5-44 (478)
129 2bry_A NEDD9 interacting prote 97.8 1.3E-05 4.3E-10 90.7 5.9 39 46-84 91-129 (497)
130 1vdc_A NTR, NADPH dependent th 97.8 8.2E-06 2.8E-10 86.5 3.8 39 47-85 8-50 (333)
131 1zmd_A Dihydrolipoyl dehydroge 97.8 8.1E-06 2.8E-10 91.6 3.9 40 47-86 6-45 (474)
132 2xve_A Flavin-containing monoo 97.8 1.3E-05 4.4E-10 89.8 5.3 40 48-87 3-48 (464)
133 3atr_A Conserved archaeal prot 97.8 7.9E-06 2.7E-10 91.1 3.5 36 47-82 6-41 (453)
134 3dgh_A TRXR-1, thioredoxin red 97.8 1.2E-05 3.9E-10 90.6 4.8 34 46-79 8-41 (483)
135 2gmh_A Electron transfer flavo 97.8 1.1E-05 3.8E-10 93.0 4.7 39 47-85 35-79 (584)
136 2r9z_A Glutathione amide reduc 97.8 1E-05 3.5E-10 90.6 4.2 39 47-86 4-42 (463)
137 1ojt_A Surface protein; redox- 97.8 9E-06 3.1E-10 91.5 3.6 40 47-86 6-45 (482)
138 2hqm_A GR, grase, glutathione 97.8 9.3E-06 3.2E-10 91.3 3.6 39 47-86 11-49 (479)
139 3ihm_A Styrene monooxygenase A 97.8 1.4E-05 4.6E-10 88.7 4.9 34 47-80 22-55 (430)
140 1fec_A Trypanothione reductase 97.8 1E-05 3.4E-10 91.4 3.8 40 47-86 3-51 (490)
141 1zk7_A HGII, reductase, mercur 97.8 1.5E-05 5.1E-10 89.2 5.2 39 47-86 4-42 (467)
142 1trb_A Thioredoxin reductase; 97.8 9.6E-06 3.3E-10 85.4 3.4 39 47-86 5-43 (320)
143 3ic9_A Dihydrolipoamide dehydr 97.7 1.1E-05 3.8E-10 91.0 3.8 39 47-86 8-46 (492)
144 1ges_A Glutathione reductase; 97.7 1E-05 3.4E-10 90.3 3.3 39 47-86 4-42 (450)
145 3pl8_A Pyranose 2-oxidase; sub 97.7 1.6E-05 5.6E-10 92.2 5.0 40 47-86 46-85 (623)
146 1ebd_A E3BD, dihydrolipoamide 97.7 1.2E-05 4.3E-10 89.6 3.8 39 47-86 3-41 (455)
147 1lvl_A Dihydrolipoamide dehydr 97.7 1.3E-05 4.3E-10 89.7 3.8 40 47-87 5-44 (458)
148 2bs2_A Quinol-fumarate reducta 97.7 1.5E-05 5.2E-10 93.0 4.5 38 47-84 5-42 (660)
149 1xdi_A RV3303C-LPDA; reductase 97.7 9.9E-06 3.4E-10 91.6 2.8 39 47-86 2-43 (499)
150 1fl2_A Alkyl hydroperoxide red 97.7 1.7E-05 5.7E-10 83.2 4.1 37 48-86 2-38 (310)
151 2a8x_A Dihydrolipoyl dehydroge 97.7 1.6E-05 5.5E-10 88.9 3.9 38 48-86 4-41 (464)
152 1chu_A Protein (L-aspartate ox 97.7 1.9E-05 6.5E-10 90.2 4.5 38 47-85 8-45 (540)
153 1ps9_A 2,4-dienoyl-COA reducta 97.7 2.7E-05 9.1E-10 91.4 5.8 42 45-86 371-412 (671)
154 1onf_A GR, grase, glutathione 97.7 1.9E-05 6.4E-10 89.3 4.3 39 47-86 2-40 (500)
155 2ywl_A Thioredoxin reductase r 97.7 3E-05 1E-09 74.7 5.1 33 48-80 2-34 (180)
156 2wpf_A Trypanothione reductase 97.7 1.4E-05 4.7E-10 90.3 2.6 31 47-77 7-38 (495)
157 3s5w_A L-ornithine 5-monooxyge 97.6 1.8E-05 6.2E-10 88.2 3.4 37 47-83 30-71 (463)
158 2e5v_A L-aspartate oxidase; ar 97.6 3.1E-05 1E-09 86.9 5.2 35 49-84 1-35 (472)
159 2aqj_A Tryptophan halogenase, 97.6 3.1E-05 1.1E-09 88.3 5.3 34 47-80 5-41 (538)
160 4b63_A L-ornithine N5 monooxyg 97.6 7.4E-05 2.5E-09 84.5 8.0 40 45-84 37-76 (501)
161 2eq6_A Pyruvate dehydrogenase 97.6 2.6E-05 8.9E-10 87.2 3.9 39 47-86 6-44 (464)
162 1gte_A Dihydropyrimidine dehyd 97.6 5.8E-05 2E-09 92.7 7.2 40 47-86 187-227 (1025)
163 1kf6_A Fumarate reductase flav 97.6 2.9E-05 1E-09 89.7 4.2 38 47-84 5-44 (602)
164 2weu_A Tryptophan 5-halogenase 97.6 3.1E-05 1.1E-09 87.6 4.2 33 48-80 3-38 (511)
165 3cp8_A TRNA uridine 5-carboxym 97.6 3.6E-05 1.2E-09 88.7 4.6 38 47-84 21-59 (641)
166 2zxi_A TRNA uridine 5-carboxym 97.6 4.3E-05 1.5E-09 87.8 5.0 37 47-83 27-64 (637)
167 2gag_A Heterotetrameric sarcos 97.6 3.5E-05 1.2E-09 94.0 4.5 41 47-87 128-168 (965)
168 2pyx_A Tryptophan halogenase; 97.6 4.8E-05 1.6E-09 86.5 5.3 35 47-81 7-53 (526)
169 2dkh_A 3-hydroxybenzoate hydro 97.6 4.5E-05 1.5E-09 88.9 5.1 37 47-83 32-69 (639)
170 3g5s_A Methylenetetrahydrofola 97.6 5.8E-05 2E-09 81.4 5.5 37 48-84 2-38 (443)
171 2e4g_A Tryptophan halogenase; 97.5 5.4E-05 1.8E-09 86.6 5.6 34 47-80 25-61 (550)
172 1y56_A Hypothetical protein PH 97.5 2.5E-05 8.5E-10 88.2 2.6 40 47-87 108-147 (493)
173 3oc4_A Oxidoreductase, pyridin 97.5 4.5E-05 1.5E-09 84.9 4.6 36 48-83 3-40 (452)
174 3ces_A MNMG, tRNA uridine 5-ca 97.5 4.4E-05 1.5E-09 88.1 4.6 37 47-83 28-65 (651)
175 1lqt_A FPRA; NADP+ derivative, 97.5 3.1E-05 1.1E-09 86.5 3.1 41 47-87 3-50 (456)
176 3fg2_P Putative rubredoxin red 97.5 6.8E-05 2.3E-09 82.2 5.7 36 48-83 2-39 (404)
177 1hyu_A AHPF, alkyl hydroperoxi 97.5 4.9E-05 1.7E-09 86.4 4.6 39 46-86 211-249 (521)
178 3h28_A Sulfide-quinone reducta 97.5 5.1E-05 1.7E-09 83.9 4.6 38 48-85 3-42 (430)
179 3kd9_A Coenzyme A disulfide re 97.5 5.7E-05 1.9E-09 84.0 5.0 37 47-83 3-41 (449)
180 3ics_A Coenzyme A-disulfide re 97.5 5.6E-05 1.9E-09 87.1 5.1 39 45-83 34-74 (588)
181 3gyx_A Adenylylsulfate reducta 97.5 4.8E-05 1.7E-09 88.7 4.5 37 47-83 22-64 (662)
182 3iwa_A FAD-dependent pyridine 97.5 4.3E-05 1.5E-09 85.6 4.0 36 48-83 4-41 (472)
183 3lxd_A FAD-dependent pyridine 97.5 5.8E-05 2E-09 83.0 4.9 38 47-84 9-48 (415)
184 3h8l_A NADH oxidase; membrane 97.5 5.2E-05 1.8E-09 83.1 4.2 37 48-84 2-41 (409)
185 1cjc_A Protein (adrenodoxin re 97.5 5.1E-05 1.7E-09 84.9 4.0 40 47-86 6-47 (460)
186 3cgb_A Pyridine nucleotide-dis 97.4 7.9E-05 2.7E-09 83.7 4.8 37 47-83 36-74 (480)
187 2x8g_A Thioredoxin glutathione 97.4 8.5E-05 2.9E-09 85.8 5.0 33 46-78 106-138 (598)
188 4b1b_A TRXR, thioredoxin reduc 97.4 7.2E-05 2.5E-09 85.2 3.9 34 47-80 42-75 (542)
189 2cdu_A NADPH oxidase; flavoenz 97.4 0.00011 3.6E-09 81.9 4.7 36 48-83 1-38 (452)
190 1pn0_A Phenol 2-monooxygenase; 97.3 0.00011 3.8E-09 85.9 4.9 36 47-82 8-48 (665)
191 3t37_A Probable dehydrogenase; 97.3 9.2E-05 3.2E-09 83.9 3.9 35 47-81 17-52 (526)
192 1nhp_A NADH peroxidase; oxidor 97.3 0.00012 4E-09 81.4 4.6 36 48-83 1-38 (447)
193 2v3a_A Rubredoxin reductase; a 97.3 0.00057 1.9E-08 74.2 10.0 41 255-295 200-241 (384)
194 1kdg_A CDH, cellobiose dehydro 97.3 0.00014 4.7E-09 83.1 5.2 37 46-82 6-42 (546)
195 3ef6_A Toluene 1,2-dioxygenase 97.3 0.00017 5.8E-09 79.2 5.5 37 48-84 3-41 (410)
196 3ntd_A FAD-dependent pyridine 97.3 0.00014 4.9E-09 83.2 4.7 36 48-83 2-39 (565)
197 1m6i_A Programmed cell death p 97.3 0.00013 4.6E-09 82.1 4.2 38 46-83 10-49 (493)
198 3klj_A NAD(FAD)-dependent dehy 97.2 0.00016 5.6E-09 78.7 4.6 38 46-83 8-45 (385)
199 2gqw_A Ferredoxin reductase; f 97.2 0.0002 6.8E-09 78.6 5.1 36 47-82 7-44 (408)
200 1q1r_A Putidaredoxin reductase 97.2 0.00023 7.9E-09 78.7 5.6 37 47-83 4-42 (431)
201 2v3a_A Rubredoxin reductase; a 97.2 0.00023 7.7E-09 77.4 5.5 34 47-80 4-39 (384)
202 2yqu_A 2-oxoglutarate dehydrog 97.2 0.00097 3.3E-08 74.1 10.2 42 255-296 221-263 (455)
203 2bc0_A NADH oxidase; flavoprot 97.2 0.00018 6.1E-09 81.0 4.1 37 47-83 35-74 (490)
204 1ju2_A HydroxynitrIle lyase; f 97.1 0.00015 5.3E-09 82.5 3.1 36 47-83 26-61 (536)
205 1xhc_A NADH oxidase /nitrite r 97.1 0.00024 8.1E-09 76.9 4.1 34 47-81 8-41 (367)
206 2eq6_A Pyruvate dehydrogenase 97.1 0.0014 4.9E-08 73.0 10.3 35 48-82 170-204 (464)
207 3sx6_A Sulfide-quinone reducta 97.1 0.00026 9E-09 78.4 3.9 34 48-81 5-41 (437)
208 4eqs_A Coenzyme A disulfide re 97.0 0.00032 1.1E-08 77.7 4.4 35 48-82 1-37 (437)
209 3q9t_A Choline dehydrogenase a 97.0 0.00031 1E-08 80.7 4.3 35 47-81 6-41 (577)
210 1ges_A Glutathione reductase; 97.0 0.0022 7.5E-08 71.2 10.9 36 47-82 167-202 (450)
211 1n4w_A CHOD, cholesterol oxida 97.0 0.00038 1.3E-08 78.6 4.8 37 47-83 5-41 (504)
212 3vrd_B FCCB subunit, flavocyto 97.0 0.00041 1.4E-08 75.6 4.4 34 48-81 3-38 (401)
213 2r9z_A Glutathione amide reduc 97.0 0.0024 8.1E-08 71.2 10.6 41 255-295 220-262 (463)
214 1coy_A Cholesterol oxidase; ox 97.0 0.00056 1.9E-08 77.4 5.5 37 46-82 10-46 (507)
215 4g6h_A Rotenone-insensitive NA 96.9 0.00041 1.4E-08 78.3 4.1 36 46-81 41-76 (502)
216 3qvp_A Glucose oxidase; oxidor 96.9 0.00038 1.3E-08 79.9 3.5 35 46-80 18-53 (583)
217 3hyw_A Sulfide-quinone reducta 96.9 0.00059 2E-08 75.4 4.6 34 48-81 3-38 (430)
218 3ef6_A Toluene 1,2-dioxygenase 96.8 0.0023 7.9E-08 70.1 9.1 42 255-296 198-240 (410)
219 3lxd_A FAD-dependent pyridine 96.8 0.0033 1.1E-07 68.9 10.4 41 255-295 207-249 (415)
220 1v59_A Dihydrolipoamide dehydr 96.8 0.0043 1.5E-07 69.3 11.1 37 47-83 183-219 (478)
221 3ic9_A Dihydrolipoamide dehydr 96.8 0.0047 1.6E-07 69.4 11.3 36 47-82 174-209 (492)
222 1q1r_A Putidaredoxin reductase 96.7 0.0048 1.6E-07 68.1 10.5 34 48-81 150-183 (431)
223 2hqm_A GR, grase, glutathione 96.7 0.0048 1.6E-07 69.0 10.7 35 48-82 186-220 (479)
224 1gpe_A Protein (glucose oxidas 96.7 0.001 3.5E-08 76.6 5.1 37 46-82 23-60 (587)
225 1xdi_A RV3303C-LPDA; reductase 96.7 0.0051 1.8E-07 69.1 10.8 42 255-296 236-278 (499)
226 3fim_B ARYL-alcohol oxidase; A 96.7 0.00053 1.8E-08 78.5 2.5 36 47-82 2-38 (566)
227 3fg2_P Putative rubredoxin red 96.7 0.0048 1.7E-07 67.3 10.0 40 256-295 198-239 (404)
228 2jbv_A Choline oxidase; alcoho 96.6 0.00086 2.9E-08 76.5 3.8 36 47-82 13-49 (546)
229 3oc4_A Oxidoreductase, pyridin 96.6 0.0051 1.8E-07 68.2 9.8 41 255-295 202-242 (452)
230 1zk7_A HGII, reductase, mercur 96.6 0.0077 2.6E-07 67.0 11.2 41 255-295 229-269 (467)
231 3o0h_A Glutathione reductase; 96.6 0.006 2E-07 68.3 10.2 41 255-295 245-286 (484)
232 2cdu_A NADPH oxidase; flavoenz 96.6 0.0053 1.8E-07 68.1 9.7 35 47-81 149-183 (452)
233 1mo9_A ORF3; nucleotide bindin 96.5 0.0063 2.2E-07 68.9 10.1 35 48-82 215-249 (523)
234 3iwa_A FAD-dependent pyridine 96.5 0.0064 2.2E-07 67.8 9.9 41 255-295 215-256 (472)
235 1onf_A GR, grase, glutathione 96.5 0.0078 2.7E-07 67.7 10.1 36 47-82 176-211 (500)
236 2wpf_A Trypanothione reductase 96.3 0.0098 3.3E-07 66.8 9.6 41 255-295 248-290 (495)
237 3ntd_A FAD-dependent pyridine 96.3 0.012 4.1E-07 67.0 10.4 34 48-81 152-185 (565)
238 1fec_A Trypanothione reductase 96.3 0.0091 3.1E-07 67.0 9.2 41 255-295 244-286 (490)
239 1m6i_A Programmed cell death p 96.1 0.012 4.2E-07 66.0 9.5 42 255-296 239-281 (493)
240 3s5w_A L-ornithine 5-monooxyge 96.1 0.035 1.2E-06 61.4 12.9 35 47-81 227-263 (463)
241 3lad_A Dihydrolipoamide dehydr 96.1 0.017 5.7E-07 64.4 10.2 35 47-81 180-214 (476)
242 4dna_A Probable glutathione re 95.8 0.026 8.8E-07 62.7 10.1 35 47-81 170-204 (463)
243 4b1b_A TRXR, thioredoxin reduc 95.6 0.064 2.2E-06 60.9 12.2 40 255-294 276-316 (542)
244 1nhp_A NADH peroxidase; oxidor 95.3 0.013 4.5E-07 64.7 5.2 37 47-83 149-185 (447)
245 3klj_A NAD(FAD)-dependent dehy 95.1 0.013 4.5E-07 63.6 4.5 36 48-83 147-182 (385)
246 4gcm_A TRXR, thioredoxin reduc 95.1 0.015 5.1E-07 60.6 4.6 35 48-82 146-180 (312)
247 1lvl_A Dihydrolipoamide dehydr 94.6 0.023 7.9E-07 63.0 4.8 36 47-82 171-206 (458)
248 3fwz_A Inner membrane protein 94.6 0.049 1.7E-06 49.8 6.1 34 47-80 7-40 (140)
249 2g1u_A Hypothetical protein TM 94.4 0.039 1.3E-06 51.4 5.2 33 48-80 20-52 (155)
250 1ebd_A E3BD, dihydrolipoamide 94.4 0.031 1.1E-06 61.8 5.3 36 47-82 170-205 (455)
251 1lss_A TRK system potassium up 94.4 0.039 1.3E-06 49.8 5.0 33 48-80 5-37 (140)
252 1xhc_A NADH oxidase /nitrite r 94.3 0.031 1.1E-06 60.1 4.9 35 48-82 144-178 (367)
253 4a5l_A Thioredoxin reductase; 94.2 0.032 1.1E-06 57.8 4.5 34 47-80 152-185 (314)
254 2gqw_A Ferredoxin reductase; f 93.9 0.045 1.5E-06 59.7 5.2 36 47-82 145-180 (408)
255 3llv_A Exopolyphosphatase-rela 93.8 0.064 2.2E-06 48.8 5.3 33 48-80 7-39 (141)
256 3cgb_A Pyridine nucleotide-dis 93.5 0.046 1.6E-06 61.0 4.4 37 47-83 186-222 (480)
257 2x5o_A UDP-N-acetylmuramoylala 93.5 0.048 1.6E-06 60.2 4.5 35 48-82 6-40 (439)
258 3lk7_A UDP-N-acetylmuramoylala 93.4 0.055 1.9E-06 59.9 4.8 34 47-80 9-42 (451)
259 3ic5_A Putative saccharopine d 93.4 0.068 2.3E-06 46.5 4.5 33 48-80 6-39 (118)
260 2bc0_A NADH oxidase; flavoprot 93.3 0.067 2.3E-06 59.8 5.5 36 47-82 194-229 (490)
261 1zmd_A Dihydrolipoyl dehydroge 93.2 0.067 2.3E-06 59.4 5.2 36 48-83 179-214 (474)
262 1ojt_A Surface protein; redox- 93.2 0.06 2.1E-06 60.0 4.8 36 47-82 185-220 (482)
263 1f0y_A HCDH, L-3-hydroxyacyl-C 93.1 0.087 3E-06 54.9 5.6 32 48-79 16-47 (302)
264 2a8x_A Dihydrolipoyl dehydroge 93.1 0.073 2.5E-06 59.0 5.2 36 47-82 171-206 (464)
265 3d1c_A Flavin-containing putat 93.0 0.077 2.6E-06 56.3 5.0 34 48-81 167-200 (369)
266 1id1_A Putative potassium chan 93.0 0.11 3.8E-06 48.0 5.5 33 48-80 4-36 (153)
267 4eqs_A Coenzyme A disulfide re 92.8 0.079 2.7E-06 58.3 4.9 35 48-82 148-182 (437)
268 3kd9_A Coenzyme A disulfide re 92.7 0.095 3.3E-06 57.7 5.5 35 48-82 149-183 (449)
269 2q0l_A TRXR, thioredoxin reduc 92.6 0.096 3.3E-06 54.1 5.0 35 47-81 143-177 (311)
270 2hmt_A YUAA protein; RCK, KTN, 92.6 0.11 3.6E-06 47.0 4.7 32 48-79 7-38 (144)
271 3ado_A Lambda-crystallin; L-gu 92.6 0.1 3.5E-06 54.9 5.1 33 48-80 7-39 (319)
272 1dxl_A Dihydrolipoamide dehydr 92.5 0.069 2.4E-06 59.2 3.9 36 47-82 177-212 (470)
273 3c85_A Putative glutathione-re 92.4 0.11 3.8E-06 49.5 4.7 34 47-80 39-73 (183)
274 2qae_A Lipoamide, dihydrolipoy 92.2 0.11 3.9E-06 57.5 5.2 36 47-82 174-209 (468)
275 1fl2_A Alkyl hydroperoxide red 92.0 0.12 4E-06 53.4 4.7 34 48-81 145-178 (310)
276 3l4b_C TRKA K+ channel protien 91.8 0.14 4.8E-06 50.4 4.9 33 48-80 1-33 (218)
277 2xve_A Flavin-containing monoo 91.7 0.13 4.5E-06 57.0 5.0 35 47-81 197-231 (464)
278 1vdc_A NTR, NADPH dependent th 91.7 0.12 4.2E-06 53.9 4.5 35 47-81 159-193 (333)
279 1pzg_A LDH, lactate dehydrogen 91.5 0.17 6E-06 53.5 5.4 34 47-80 9-43 (331)
280 3urh_A Dihydrolipoyl dehydroge 91.5 0.13 4.5E-06 57.3 4.7 36 47-82 198-233 (491)
281 3gwf_A Cyclohexanone monooxyge 91.4 0.13 4.4E-06 58.3 4.6 35 47-81 178-212 (540)
282 2a87_A TRXR, TR, thioredoxin r 91.4 0.14 4.8E-06 53.7 4.6 35 47-81 155-189 (335)
283 3dk9_A Grase, GR, glutathione 91.4 0.16 5.3E-06 56.5 5.2 36 47-82 187-222 (478)
284 3l8k_A Dihydrolipoyl dehydroge 91.3 0.17 5.7E-06 56.1 5.3 36 47-82 172-207 (466)
285 2vdc_G Glutamate synthase [NAD 91.3 0.4 1.4E-05 53.0 8.3 39 454-494 410-448 (456)
286 2q7v_A Thioredoxin reductase; 91.3 0.15 5.1E-06 53.2 4.6 34 48-81 153-186 (325)
287 1trb_A Thioredoxin reductase; 91.3 0.14 5E-06 52.9 4.5 34 48-81 146-179 (320)
288 4e12_A Diketoreductase; oxidor 91.2 0.17 5.8E-06 52.2 4.9 33 48-80 5-37 (283)
289 4dio_A NAD(P) transhydrogenase 91.1 0.19 6.5E-06 54.4 5.4 34 47-80 190-223 (405)
290 1kyq_A Met8P, siroheme biosynt 91.0 0.13 4.4E-06 52.8 3.7 34 47-80 13-46 (274)
291 3k6j_A Protein F01G10.3, confi 91.0 0.4 1.4E-05 52.9 7.9 36 46-81 53-88 (460)
292 2dpo_A L-gulonate 3-dehydrogen 90.9 0.2 6.7E-06 52.8 5.1 33 48-80 7-39 (319)
293 2zbw_A Thioredoxin reductase; 90.9 0.14 4.9E-06 53.4 4.0 35 47-81 152-186 (335)
294 4ap3_A Steroid monooxygenase; 90.8 0.15 5.2E-06 57.9 4.4 35 47-81 191-225 (549)
295 3dfz_A SIRC, precorrin-2 dehyd 90.8 0.19 6.5E-06 50.0 4.6 34 47-80 31-64 (223)
296 2gv8_A Monooxygenase; FMO, FAD 90.8 0.18 6.1E-06 55.5 4.9 36 47-82 212-248 (447)
297 3uox_A Otemo; baeyer-villiger 90.8 0.14 4.9E-06 58.0 4.2 35 47-81 185-219 (545)
298 3itj_A Thioredoxin reductase 1 90.7 0.17 5.9E-06 52.6 4.5 35 47-81 173-207 (338)
299 1lld_A L-lactate dehydrogenase 90.7 0.21 7.1E-06 52.3 5.1 34 47-80 7-42 (319)
300 1ks9_A KPA reductase;, 2-dehyd 90.7 0.22 7.7E-06 50.9 5.2 33 48-80 1-33 (291)
301 3i83_A 2-dehydropantoate 2-red 90.7 0.21 7.2E-06 52.4 5.1 33 48-80 3-35 (320)
302 2y0c_A BCEC, UDP-glucose dehyd 90.6 0.21 7.2E-06 55.7 5.3 34 47-80 8-41 (478)
303 2raf_A Putative dinucleotide-b 90.5 0.26 8.9E-06 48.3 5.2 34 48-81 20-53 (209)
304 1zej_A HBD-9, 3-hydroxyacyl-CO 90.3 0.23 7.9E-06 51.6 4.9 34 46-80 11-44 (293)
305 3eag_A UDP-N-acetylmuramate:L- 90.3 0.23 8E-06 52.3 5.0 33 48-80 5-38 (326)
306 3p2y_A Alanine dehydrogenase/p 90.2 0.2 6.9E-06 53.8 4.5 34 47-80 184-217 (381)
307 3cty_A Thioredoxin reductase; 90.2 0.18 6.1E-06 52.4 4.0 34 48-81 156-189 (319)
308 3ics_A Coenzyme A-disulfide re 90.2 0.24 8.3E-06 56.5 5.5 36 47-82 187-222 (588)
309 3hn2_A 2-dehydropantoate 2-red 90.0 0.22 7.5E-06 52.1 4.5 33 48-80 3-35 (312)
310 3doj_A AT3G25530, dehydrogenas 89.9 0.29 9.8E-06 51.1 5.3 35 46-80 20-54 (310)
311 2x8g_A Thioredoxin glutathione 89.7 0.27 9.2E-06 56.3 5.4 32 48-79 287-318 (598)
312 3f8d_A Thioredoxin reductase ( 89.6 0.27 9.2E-06 50.7 4.8 35 47-81 154-188 (323)
313 1hyu_A AHPF, alkyl hydroperoxi 89.5 0.22 7.4E-06 56.1 4.3 35 47-81 355-389 (521)
314 3ab1_A Ferredoxin--NADP reduct 89.5 0.21 7.3E-06 52.8 4.0 35 47-81 163-197 (360)
315 3ghy_A Ketopantoate reductase 89.5 0.32 1.1E-05 51.4 5.3 32 48-79 4-35 (335)
316 1zcj_A Peroxisomal bifunctiona 89.5 0.35 1.2E-05 53.6 5.9 34 47-80 37-70 (463)
317 2ew2_A 2-dehydropantoate 2-red 89.4 0.3 1E-05 50.6 5.0 32 48-79 4-35 (316)
318 3r9u_A Thioredoxin reductase; 89.4 0.31 1.1E-05 50.0 5.0 35 47-81 147-181 (315)
319 3gg2_A Sugar dehydrogenase, UD 89.3 0.29 1E-05 54.0 5.0 33 48-80 3-35 (450)
320 2a9f_A Putative malic enzyme ( 89.2 0.28 9.5E-06 52.7 4.6 33 47-79 188-221 (398)
321 3hwr_A 2-dehydropantoate 2-red 88.9 0.34 1.2E-05 50.8 5.0 32 47-79 19-50 (318)
322 3g79_A NDP-N-acetyl-D-galactos 88.8 0.33 1.1E-05 54.0 5.0 34 48-81 19-54 (478)
323 2qrj_A Saccharopine dehydrogen 88.6 0.61 2.1E-05 50.2 6.8 39 47-85 214-257 (394)
324 3dtt_A NADP oxidoreductase; st 88.6 0.4 1.4E-05 48.2 5.1 34 47-80 19-52 (245)
325 2ewd_A Lactate dehydrogenase,; 88.6 0.36 1.2E-05 50.6 4.9 34 47-80 4-38 (317)
326 3pef_A 6-phosphogluconate dehy 88.5 0.38 1.3E-05 49.5 4.9 33 48-80 2-34 (287)
327 2hjr_A Malate dehydrogenase; m 88.4 0.43 1.5E-05 50.4 5.4 33 48-80 15-48 (328)
328 1vl6_A Malate oxidoreductase; 88.4 0.35 1.2E-05 51.9 4.6 33 47-79 192-225 (388)
329 3g17_A Similar to 2-dehydropan 88.3 0.3 1E-05 50.5 4.0 33 48-80 3-35 (294)
330 1bg6_A N-(1-D-carboxylethyl)-L 88.3 0.4 1.4E-05 50.8 5.1 32 48-79 5-36 (359)
331 3g0o_A 3-hydroxyisobutyrate de 88.3 0.41 1.4E-05 49.7 5.1 33 48-80 8-40 (303)
332 3dgz_A Thioredoxin reductase 2 88.3 0.43 1.5E-05 53.1 5.6 33 47-79 185-217 (488)
333 3k96_A Glycerol-3-phosphate de 88.2 0.42 1.5E-05 51.0 5.2 33 47-79 29-61 (356)
334 3ggo_A Prephenate dehydrogenas 88.2 0.5 1.7E-05 49.5 5.6 33 48-80 34-68 (314)
335 3pid_A UDP-glucose 6-dehydroge 88.1 0.38 1.3E-05 52.7 4.8 33 47-80 36-68 (432)
336 4a7p_A UDP-glucose dehydrogena 88.0 0.46 1.6E-05 52.3 5.5 34 47-80 8-41 (446)
337 2gmh_A Electron transfer flavo 88.0 8.8 0.0003 43.5 16.4 37 454-490 347-386 (584)
338 3qfa_A Thioredoxin reductase 1 87.9 0.45 1.5E-05 53.5 5.5 32 48-79 211-242 (519)
339 1x13_A NAD(P) transhydrogenase 87.9 0.45 1.5E-05 51.7 5.3 33 48-80 173-205 (401)
340 1z82_A Glycerol-3-phosphate de 87.8 0.45 1.5E-05 50.1 5.1 33 47-79 14-46 (335)
341 1mv8_A GMD, GDP-mannose 6-dehy 87.7 0.37 1.3E-05 53.0 4.4 33 48-80 1-33 (436)
342 2v6b_A L-LDH, L-lactate dehydr 87.6 0.46 1.6E-05 49.5 4.9 33 48-80 1-35 (304)
343 3mog_A Probable 3-hydroxybutyr 87.6 0.5 1.7E-05 52.6 5.4 33 48-80 6-38 (483)
344 1l7d_A Nicotinamide nucleotide 87.5 0.51 1.7E-05 50.9 5.4 34 47-80 172-205 (384)
345 3oj0_A Glutr, glutamyl-tRNA re 87.3 0.22 7.5E-06 45.5 2.0 32 48-79 22-53 (144)
346 3lzw_A Ferredoxin--NADP reduct 87.2 0.4 1.4E-05 49.6 4.2 35 47-81 154-188 (332)
347 1pjc_A Protein (L-alanine dehy 87.2 0.54 1.8E-05 50.3 5.3 32 48-79 168-199 (361)
348 1cjc_A Protein (adrenodoxin re 87.1 0.46 1.6E-05 52.6 4.8 35 47-81 145-200 (460)
349 3qha_A Putative oxidoreductase 87.1 0.4 1.4E-05 49.7 4.1 34 47-80 15-48 (296)
350 4dll_A 2-hydroxy-3-oxopropiona 87.1 0.47 1.6E-05 49.8 4.7 34 47-80 31-64 (320)
351 1t2d_A LDH-P, L-lactate dehydr 87.0 0.61 2.1E-05 49.1 5.5 33 48-80 5-38 (322)
352 1txg_A Glycerol-3-phosphate de 86.9 0.43 1.5E-05 50.0 4.3 31 48-78 1-31 (335)
353 3fbs_A Oxidoreductase; structu 86.8 0.39 1.3E-05 48.8 3.8 37 454-492 258-294 (297)
354 1nyt_A Shikimate 5-dehydrogena 86.8 0.6 2.1E-05 47.7 5.2 32 48-79 120-151 (271)
355 3ego_A Probable 2-dehydropanto 86.7 0.55 1.9E-05 48.9 4.9 32 48-80 3-34 (307)
356 2h78_A Hibadh, 3-hydroxyisobut 86.6 0.51 1.7E-05 48.8 4.5 33 48-80 4-36 (302)
357 2vns_A Metalloreductase steap3 86.4 0.66 2.3E-05 45.6 5.1 32 48-79 29-60 (215)
358 3zwc_A Peroxisomal bifunctiona 86.4 1.2 4.1E-05 52.2 8.0 35 46-80 315-349 (742)
359 3dgh_A TRXR-1, thioredoxin red 86.3 0.63 2.1E-05 51.6 5.4 33 47-79 187-219 (483)
360 3l6d_A Putative oxidoreductase 86.2 0.9 3.1E-05 47.2 6.2 34 47-80 9-42 (306)
361 3l9w_A Glutathione-regulated p 86.1 0.65 2.2E-05 50.6 5.3 34 47-80 4-37 (413)
362 3pdu_A 3-hydroxyisobutyrate de 86.1 0.45 1.5E-05 48.9 3.8 33 48-80 2-34 (287)
363 2eez_A Alanine dehydrogenase; 86.0 0.67 2.3E-05 49.7 5.3 33 48-80 167-199 (369)
364 3vtf_A UDP-glucose 6-dehydroge 85.9 0.65 2.2E-05 50.9 5.1 34 47-80 21-54 (444)
365 4e21_A 6-phosphogluconate dehy 85.9 0.67 2.3E-05 49.5 5.1 34 47-80 22-55 (358)
366 2dkh_A 3-hydroxybenzoate hydro 85.7 13 0.00043 42.7 16.2 40 453-492 341-383 (639)
367 3tl2_A Malate dehydrogenase; c 85.7 0.67 2.3E-05 48.5 4.9 33 47-79 8-41 (315)
368 1guz_A Malate dehydrogenase; o 85.7 0.68 2.3E-05 48.3 5.0 33 48-80 1-35 (310)
369 4ffl_A PYLC; amino acid, biosy 85.6 0.69 2.4E-05 49.2 5.1 33 48-80 2-34 (363)
370 1jay_A Coenzyme F420H2:NADP+ o 85.6 0.66 2.3E-05 45.1 4.6 32 48-79 1-33 (212)
371 2wtb_A MFP2, fatty acid multif 85.5 0.79 2.7E-05 53.7 5.9 34 47-80 312-345 (725)
372 1pjq_A CYSG, siroheme synthase 85.5 0.6 2E-05 51.6 4.7 33 47-79 12-44 (457)
373 1dlj_A UDP-glucose dehydrogena 85.5 0.5 1.7E-05 51.3 4.0 32 48-80 1-32 (402)
374 4g65_A TRK system potassium up 85.3 0.34 1.1E-05 53.7 2.5 34 47-80 3-36 (461)
375 2o3j_A UDP-glucose 6-dehydroge 85.3 0.63 2.2E-05 51.8 4.7 33 48-80 10-44 (481)
376 4a9w_A Monooxygenase; baeyer-v 85.2 0.63 2.1E-05 48.5 4.5 33 47-80 163-195 (357)
377 3gvi_A Malate dehydrogenase; N 85.1 0.84 2.9E-05 48.0 5.3 34 47-80 7-41 (324)
378 4huj_A Uncharacterized protein 85.0 0.58 2E-05 46.1 3.8 32 48-79 24-56 (220)
379 3phh_A Shikimate dehydrogenase 84.9 0.88 3E-05 46.5 5.2 34 47-80 118-151 (269)
380 1ur5_A Malate dehydrogenase; o 84.8 0.84 2.9E-05 47.6 5.2 33 48-80 3-36 (309)
381 1p77_A Shikimate 5-dehydrogena 84.8 0.63 2.2E-05 47.6 4.1 32 48-79 120-151 (272)
382 2vhw_A Alanine dehydrogenase; 84.8 0.83 2.8E-05 49.1 5.3 33 47-79 168-200 (377)
383 2egg_A AROE, shikimate 5-dehyd 84.7 0.79 2.7E-05 47.6 4.9 32 48-79 142-174 (297)
384 2uyy_A N-PAC protein; long-cha 84.6 1 3.4E-05 46.9 5.7 33 48-80 31-63 (316)
385 1y6j_A L-lactate dehydrogenase 84.5 0.8 2.7E-05 48.0 4.9 33 47-79 7-41 (318)
386 2qyt_A 2-dehydropantoate 2-red 84.5 0.53 1.8E-05 48.8 3.5 31 48-78 9-45 (317)
387 1o94_A Tmadh, trimethylamine d 84.4 0.69 2.4E-05 54.3 4.8 34 47-80 528-563 (729)
388 3ldh_A Lactate dehydrogenase; 84.4 1 3.5E-05 47.4 5.6 34 46-79 20-55 (330)
389 3qsg_A NAD-binding phosphogluc 84.3 0.7 2.4E-05 48.2 4.3 33 47-79 24-57 (312)
390 3e8x_A Putative NAD-dependent 84.3 0.88 3E-05 44.9 4.9 35 46-80 20-55 (236)
391 1jw9_B Molybdopterin biosynthe 84.3 0.76 2.6E-05 46.4 4.4 32 48-79 32-64 (249)
392 1a5z_A L-lactate dehydrogenase 84.2 0.71 2.4E-05 48.4 4.3 32 48-79 1-34 (319)
393 4ezb_A Uncharacterized conserv 84.1 0.73 2.5E-05 48.3 4.3 33 48-80 25-58 (317)
394 2f1k_A Prephenate dehydrogenas 84.0 0.91 3.1E-05 46.2 5.0 32 48-79 1-32 (279)
395 1wdk_A Fatty oxidation complex 84.0 0.91 3.1E-05 53.1 5.5 34 47-80 314-347 (715)
396 1yqg_A Pyrroline-5-carboxylate 83.8 0.79 2.7E-05 46.2 4.4 32 48-79 1-33 (263)
397 2rir_A Dipicolinate synthase, 83.8 0.97 3.3E-05 46.8 5.1 34 47-80 157-190 (300)
398 3pqe_A L-LDH, L-lactate dehydr 83.7 0.93 3.2E-05 47.7 4.9 33 47-79 5-39 (326)
399 2gag_A Heterotetrameric sarcos 83.6 0.47 1.6E-05 57.6 3.0 36 48-83 285-320 (965)
400 2gf2_A Hibadh, 3-hydroxyisobut 83.5 0.9 3.1E-05 46.7 4.7 33 48-80 1-33 (296)
401 3d4o_A Dipicolinate synthase s 83.3 1.1 3.6E-05 46.4 5.2 33 48-80 156-188 (293)
402 2q3e_A UDP-glucose 6-dehydroge 83.2 0.79 2.7E-05 50.8 4.4 33 48-80 6-40 (467)
403 1evy_A Glycerol-3-phosphate de 83.2 0.55 1.9E-05 50.1 3.0 31 49-79 17-47 (366)
404 2pv7_A T-protein [includes: ch 83.0 1 3.5E-05 46.6 4.9 33 48-80 22-55 (298)
405 3p7m_A Malate dehydrogenase; p 82.9 1.2 4E-05 46.8 5.3 33 48-80 6-39 (321)
406 2hk9_A Shikimate dehydrogenase 82.8 0.8 2.7E-05 46.9 3.9 32 48-79 130-161 (275)
407 1vpd_A Tartronate semialdehyde 82.8 0.92 3.2E-05 46.6 4.4 32 48-79 6-37 (299)
408 1w4x_A Phenylacetone monooxyge 82.7 0.85 2.9E-05 51.5 4.4 35 47-81 186-220 (542)
409 1lqt_A FPRA; NADP+ derivative, 82.6 0.95 3.3E-05 49.9 4.7 36 47-82 147-203 (456)
410 3cky_A 2-hydroxymethyl glutara 82.6 0.98 3.3E-05 46.5 4.5 33 47-79 4-36 (301)
411 1hyh_A L-hicdh, L-2-hydroxyiso 82.5 0.91 3.1E-05 47.3 4.3 33 48-80 2-36 (309)
412 1oju_A MDH, malate dehydrogena 82.2 0.98 3.3E-05 46.8 4.3 33 48-80 1-35 (294)
413 3c24_A Putative oxidoreductase 82.2 1.1 3.9E-05 45.8 4.8 32 48-79 12-44 (286)
414 3ew7_A LMO0794 protein; Q8Y8U8 82.2 1.3 4.4E-05 42.8 5.0 33 48-80 1-34 (221)
415 1gte_A Dihydropyrimidine dehyd 82.0 1 3.6E-05 54.9 5.2 33 48-80 333-366 (1025)
416 2g5c_A Prephenate dehydrogenas 82.0 1.2 4.2E-05 45.3 5.0 32 48-79 2-35 (281)
417 4gwg_A 6-phosphogluconate dehy 82.0 1.2 4.2E-05 49.4 5.2 33 48-80 5-37 (484)
418 2i6t_A Ubiquitin-conjugating e 82.0 1.1 3.7E-05 46.7 4.5 33 48-80 15-49 (303)
419 2p4q_A 6-phosphogluconate dehy 82.0 1.2 4.2E-05 49.6 5.3 34 47-80 10-43 (497)
420 3k30_A Histamine dehydrogenase 81.8 0.95 3.2E-05 52.8 4.5 37 47-83 523-561 (690)
421 1yj8_A Glycerol-3-phosphate de 81.8 0.83 2.8E-05 48.9 3.8 33 48-80 22-61 (375)
422 2izz_A Pyrroline-5-carboxylate 81.6 1.3 4.4E-05 46.4 5.1 33 48-80 23-59 (322)
423 3gpi_A NAD-dependent epimerase 81.6 1.5 5.2E-05 44.5 5.5 33 48-80 4-36 (286)
424 4aj2_A L-lactate dehydrogenase 81.5 1.5 5.1E-05 46.2 5.5 34 46-79 18-53 (331)
425 2zyd_A 6-phosphogluconate dehy 81.5 1.1 3.7E-05 49.9 4.6 32 48-79 16-47 (480)
426 2pgd_A 6-phosphogluconate dehy 81.5 1.2 4.2E-05 49.5 5.1 33 48-80 3-35 (482)
427 1edz_A 5,10-methylenetetrahydr 81.5 1.1 3.7E-05 47.0 4.3 33 47-79 177-210 (320)
428 3vku_A L-LDH, L-lactate dehydr 81.5 1.2 4.3E-05 46.7 4.8 34 46-79 8-43 (326)
429 3don_A Shikimate dehydrogenase 81.4 0.97 3.3E-05 46.4 3.9 33 48-80 118-151 (277)
430 3nep_X Malate dehydrogenase; h 81.4 1.1 3.9E-05 46.8 4.5 33 48-80 1-35 (314)
431 2rcy_A Pyrroline carboxylate r 81.3 1.2 4.1E-05 44.7 4.6 33 48-80 5-41 (262)
432 3u62_A Shikimate dehydrogenase 81.3 1.5 5.1E-05 44.4 5.2 31 49-79 110-141 (253)
433 4id9_A Short-chain dehydrogena 81.3 1.3 4.5E-05 46.3 5.0 36 45-80 17-53 (347)
434 3dfu_A Uncharacterized protein 81.2 0.51 1.7E-05 47.1 1.7 32 48-79 7-38 (232)
435 2cvz_A Dehydrogenase, 3-hydrox 81.0 1.1 3.7E-05 45.8 4.2 32 48-80 2-33 (289)
436 1x0v_A GPD-C, GPDH-C, glycerol 81.0 0.74 2.5E-05 48.7 3.0 33 48-80 9-48 (354)
437 3pwz_A Shikimate dehydrogenase 81.0 1.5 5.2E-05 44.8 5.2 33 47-79 120-153 (272)
438 3h2s_A Putative NADH-flavin re 80.9 1.5 5.1E-05 42.6 4.9 32 48-79 1-33 (224)
439 3gt0_A Pyrroline-5-carboxylate 80.8 1.6 5.4E-05 43.6 5.2 32 48-79 3-38 (247)
440 1pgj_A 6PGDH, 6-PGDH, 6-phosph 80.8 1.3 4.5E-05 49.2 5.0 32 48-79 2-33 (478)
441 1i36_A Conserved hypothetical 80.7 1.2 4E-05 44.9 4.2 31 48-78 1-31 (264)
442 3d1l_A Putative NADP oxidoredu 80.5 1.2 4E-05 45.1 4.1 32 48-79 11-43 (266)
443 4g6h_A Rotenone-insensitive NA 80.4 0.96 3.3E-05 50.6 3.8 35 48-82 218-266 (502)
444 2d5c_A AROE, shikimate 5-dehyd 80.4 1.6 5.5E-05 44.1 5.2 31 49-79 118-148 (263)
445 3c7a_A Octopine dehydrogenase; 80.3 0.78 2.7E-05 49.6 2.9 31 48-78 3-34 (404)
446 3ktd_A Prephenate dehydrogenas 80.3 1.5 5.2E-05 46.4 5.1 33 48-80 9-41 (341)
447 3jyo_A Quinate/shikimate dehyd 80.3 1.6 5.6E-05 44.8 5.2 33 47-79 127-160 (283)
448 3tnl_A Shikimate dehydrogenase 80.3 1.6 5.4E-05 45.7 5.1 33 47-79 154-187 (315)
449 3fbt_A Chorismate mutase and s 80.2 1.4 4.8E-05 45.3 4.6 33 47-79 122-155 (282)
450 3ond_A Adenosylhomocysteinase; 80.2 1.5 5.3E-05 48.4 5.2 33 48-80 266-298 (488)
451 3fi9_A Malate dehydrogenase; s 80.1 1.6 5.3E-05 46.3 5.0 32 48-79 9-43 (343)
452 1leh_A Leucine dehydrogenase; 80.0 1.6 5.6E-05 46.5 5.2 32 48-79 174-205 (364)
453 3ojo_A CAP5O; rossmann fold, c 79.9 1.2 4.2E-05 48.6 4.3 33 48-80 12-44 (431)
454 1np3_A Ketol-acid reductoisome 79.8 1.7 5.9E-05 45.8 5.3 33 48-80 17-49 (338)
455 4gbj_A 6-phosphogluconate dehy 79.7 1.1 3.8E-05 46.4 3.7 33 48-80 6-38 (297)
456 1nvt_A Shikimate 5'-dehydrogen 79.7 1.2 4.2E-05 45.7 4.0 31 48-79 129-159 (287)
457 3tri_A Pyrroline-5-carboxylate 79.6 1.9 6.5E-05 44.1 5.4 33 48-80 4-39 (280)
458 2zqz_A L-LDH, L-lactate dehydr 79.5 1.5 5.2E-05 46.1 4.7 35 45-79 7-43 (326)
459 2aef_A Calcium-gated potassium 79.5 0.69 2.4E-05 45.8 2.0 33 47-80 9-41 (234)
460 3o8q_A Shikimate 5-dehydrogena 79.5 1.6 5.6E-05 44.8 4.9 33 47-79 126-159 (281)
461 1yb4_A Tartronic semialdehyde 79.3 1 3.6E-05 46.1 3.4 30 48-77 4-33 (295)
462 2ahr_A Putative pyrroline carb 79.3 1.4 4.8E-05 44.3 4.2 32 48-79 4-35 (259)
463 2ywl_A Thioredoxin reductase r 79.2 2.2 7.6E-05 39.9 5.4 38 256-295 70-108 (180)
464 4fk1_A Putative thioredoxin re 78.6 1.7 5.9E-05 44.6 4.8 42 448-492 261-302 (304)
465 3ius_A Uncharacterized conserv 78.5 1.5 5E-05 44.5 4.2 33 48-80 6-38 (286)
466 4hv4_A UDP-N-acetylmuramate--L 78.5 1.3 4.4E-05 49.4 4.0 34 47-80 22-56 (494)
467 4b4o_A Epimerase family protei 78.3 2.1 7.1E-05 43.7 5.3 33 48-80 1-34 (298)
468 3d0o_A L-LDH 1, L-lactate dehy 77.9 1.6 5.6E-05 45.6 4.4 32 48-79 7-40 (317)
469 3t4e_A Quinate/shikimate dehyd 77.9 2.1 7.1E-05 44.7 5.2 33 47-79 148-181 (312)
470 1a4i_A Methylenetetrahydrofola 77.9 2 6.9E-05 44.4 4.9 33 47-79 165-198 (301)
471 1hdo_A Biliverdin IX beta redu 77.8 2.2 7.5E-05 40.5 5.0 33 48-80 4-37 (206)
472 3ngx_A Bifunctional protein fo 77.6 2.1 7.2E-05 43.7 4.9 33 47-79 150-183 (276)
473 2dbq_A Glyoxylate reductase; D 77.4 2.4 8.1E-05 44.7 5.5 34 47-80 150-183 (334)
474 3gvp_A Adenosylhomocysteinase 77.4 2.2 7.5E-05 46.4 5.2 33 48-80 221-253 (435)
475 1ez4_A Lactate dehydrogenase; 77.4 1.7 5.8E-05 45.5 4.3 33 47-79 5-39 (318)
476 3h8v_A Ubiquitin-like modifier 77.2 1.6 5.5E-05 45.1 4.0 32 47-78 36-68 (292)
477 1ldn_A L-lactate dehydrogenase 77.2 1.9 6.6E-05 45.0 4.7 32 48-79 7-40 (316)
478 1npy_A Hypothetical shikimate 77.1 2.1 7.1E-05 43.7 4.8 32 48-79 120-152 (271)
479 3rui_A Ubiquitin-like modifier 77.1 2.2 7.7E-05 44.9 5.1 33 47-79 34-67 (340)
480 2dvm_A Malic enzyme, 439AA lon 77.1 2.1 7.1E-05 46.9 5.0 30 48-77 187-219 (439)
481 2iz1_A 6-phosphogluconate dehy 77.0 2 6.8E-05 47.6 4.9 32 48-79 6-37 (474)
482 1gpj_A Glutamyl-tRNA reductase 77.0 1.9 6.4E-05 46.8 4.6 34 47-80 167-201 (404)
483 4a26_A Putative C-1-tetrahydro 76.7 2.3 7.7E-05 44.0 4.9 33 47-79 165-198 (300)
484 3ce6_A Adenosylhomocysteinase; 76.7 2.3 7.7E-05 47.4 5.2 33 48-80 275-307 (494)
485 1lu9_A Methylene tetrahydromet 76.0 2.5 8.7E-05 43.2 5.2 33 47-79 119-152 (287)
486 3vps_A TUNA, NAD-dependent epi 75.9 2.7 9.1E-05 43.1 5.3 35 47-81 7-42 (321)
487 2gcg_A Glyoxylate reductase/hy 75.7 5.1 0.00017 42.0 7.5 34 47-80 155-188 (330)
488 3h9u_A Adenosylhomocysteinase; 75.3 2.7 9.2E-05 45.8 5.2 33 48-80 212-244 (436)
489 1zud_1 Adenylyltransferase THI 74.8 2.6 8.7E-05 42.5 4.7 32 48-79 29-61 (251)
490 1b0a_A Protein (fold bifunctio 74.8 2.5 8.6E-05 43.4 4.6 33 47-79 159-192 (288)
491 3b1f_A Putative prephenate deh 74.6 2.5 8.4E-05 43.2 4.6 32 48-79 7-40 (290)
492 1y1p_A ARII, aldehyde reductas 74.5 3.8 0.00013 42.3 6.1 33 47-79 11-44 (342)
493 1pn0_A Phenol 2-monooxygenase; 74.5 27 0.00092 40.2 13.9 38 454-491 351-391 (665)
494 3ba1_A HPPR, hydroxyphenylpyru 74.5 3 0.0001 43.9 5.3 34 47-80 164-197 (333)
495 2yjz_A Metalloreductase steap4 76.5 0.63 2.2E-05 45.3 0.0 33 48-80 20-52 (201)
496 3dhn_A NAD-dependent epimerase 74.3 2.8 9.4E-05 40.7 4.7 33 48-80 5-38 (227)
497 2x0j_A Malate dehydrogenase; o 74.2 2.2 7.7E-05 44.1 4.1 33 48-80 1-35 (294)
498 2d4a_B Malate dehydrogenase; a 73.8 2.5 8.6E-05 43.9 4.5 32 49-80 1-33 (308)
499 4gx0_A TRKA domain protein; me 73.4 3 0.0001 47.1 5.4 34 48-81 349-382 (565)
500 1mld_A Malate dehydrogenase; o 73.3 2.3 8E-05 44.3 4.1 33 48-80 1-36 (314)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=8e-50 Score=469.95 Aligned_cols=464 Identities=44% Similarity=0.765 Sum_probs=354.7
Q ss_pred HHHHHHHHHHHHhhhhhcCCcccccccCCCCCCCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeec
Q 004684 12 SLLDSAYNYLVSNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKM 91 (737)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~g~~~~~~~~~p~~~~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~ 91 (737)
..|..+..|+..++++|+|+.+... + ......+||+|||||++||+||++|++.|++|+|||+++++||++.+++.
T Consensus 76 ~~i~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~ 151 (662)
T 2z3y_A 76 VLVHRVHSYLERHGLINFGIYKRIK---P-LPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK 151 (662)
T ss_dssp HHHHHHHHHHHHTTSSSCSSCBCSS---C-CCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCccccC---C-CcccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc
Confidence 5688889999999999998865432 1 11234589999999999999999999999999999999999999999987
Q ss_pred CCCCCCccceEeccccceecCCCCcHHHHHHHHhCCCeeeecCCcceEecCCcccCchhhHHHHHHHHHHHHHHHHHH--
Q 004684 92 EGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLR-- 169 (737)
Q Consensus 92 ~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~-- 169 (737)
.+. .+|+|++++++...+++..+.+++|++...+.....++..+|..++..........+..++.....+.
T Consensus 152 ~~~-------~~~~G~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (662)
T 2z3y_A 152 GNY-------VADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQ 224 (662)
T ss_dssp TTE-------EEESSCCEECCSBTCHHHHHHHHHTCCEEECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCc-------hhhcCcEEEeCCCCchHHHHHHHhCcchhcccccceEEeCCCcCCCcchhhhhhHHHHHHHHHHHHHHhc
Confidence 655 99999999988777888889999999887776666677777775543322111111111111100000
Q ss_pred ----------------------------------------H-----------------HhhhhccC-CC----------H
Q 004684 170 ----------------------------------------Q-----------------LMGEVAMD-VS----------L 181 (737)
Q Consensus 170 ----------------------------------------~-----------------~~~~~~~~-~s----------l 181 (737)
. .+..+... .. .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~ 304 (662)
T 2z3y_A 225 LDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDIT 304 (662)
T ss_dssp SCCCEETTEECBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCT
T ss_pred ccccccCCCCCCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccc
Confidence 0 00000000 00 0
Q ss_pred HH------------HHHHHHH--------------Hhcc-----CCCHHHHHHHHHHHHhhhhhchhhhhhHHHHhhccC
Q 004684 182 GS------------ALETFWR--------------VYWD-----SGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQD 230 (737)
Q Consensus 182 ~~------------~l~~~~~--------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~ 230 (737)
.+ .+..+.. .... ..++..+.++.|+...+++.++..+..+++..|.+.
T Consensus 305 ~~~s~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~ 384 (662)
T 2z3y_A 305 AEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQD 384 (662)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHHHHTTSCCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTT
T ss_pred hhhhhhhhhhhHHHHHhhhhhhhhhhhhHHHHHHHhhccCcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCC
Confidence 00 0000000 0000 123445556667666666665555556666566554
Q ss_pred CCCCCCCCeeecCCCHHHHHHHHHHcCCcccCceEEEEEecCCcEEEEE-C------CeEEEecEEEEccChhhhhc--C
Q 004684 231 DPYDMGGDHCFLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLA-G------SQVFEGDMVLCTVPLGVLKS--G 301 (737)
Q Consensus 231 ~~~~~~g~~~~~~gG~~~Lv~aLa~gl~I~lnt~V~~I~~~~~~V~V~~-~------G~~i~AD~VI~AvP~~~l~~--~ 301 (737)
..+...+.++.+++|+++|+++|+++++|++|++|++|..++++|.|++ + +++++||+||+|+|+.++++ .
T Consensus 385 ~~~~~~g~~~~~~gG~~~l~~~La~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 385 DDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp GGGCCBSCCEEETTCTTHHHHHHTTTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred cccccCCceeeecCcHHHHHHHHHhcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 4445567789999999999999999999999999999999999999887 4 57899999999999999986 3
Q ss_pred CcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEEeeccccCCCcEEEEEecchhh
Q 004684 302 SIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAA 381 (737)
Q Consensus 302 ~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~p~g~~~L~~~v~g~~a 381 (737)
.+.|.|+||+.+.+++++++|+++.||++.|+++||+.+...+|.+......++..+.+|+.. +.++|++|+.|..+
T Consensus 465 ~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a 541 (662)
T 2z3y_A 465 AVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAA 541 (662)
T ss_dssp SSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHH
T ss_pred ceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhH
Confidence 478999999999999999999999999999999999877677887765544455556666543 45688999999999
Q ss_pred hhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCCCCcHHHHhcccCC--------
Q 004684 382 HKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGD-------- 453 (737)
Q Consensus 382 ~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~~~~~~l~~pv~~-------- 453 (737)
..+..++++++++.++++|+++|+.. ..++|..+.+++|.++||+.|+|++++||+....++.+.+|+..
T Consensus 542 ~~~~~lsdee~~~~~l~~L~~~~g~~--~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~ 619 (662)
T 2z3y_A 542 GIMENISDDVIVGRCLAILKGIFGSS--AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAP 619 (662)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHCTT--SSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC--------
T ss_pred HHHHhCCHHHHHHHHHHHHHHHhCCc--ccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccccccccc
Confidence 99999999999999999999999853 34689999999999999999999999999987778888888632
Q ss_pred ---CcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhh
Q 004684 454 ---GRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANA 491 (737)
Q Consensus 454 ---~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~ 491 (737)
++|||||++|+..|+||||||+.||++||++|++.+.+
T Consensus 620 ~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 620 QPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp -CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence 69999999999888999999999999999999998764
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=1.1e-49 Score=475.19 Aligned_cols=467 Identities=45% Similarity=0.769 Sum_probs=348.3
Q ss_pred HHHHHHHHHHHHhhhhhcCCcccccccCCCCCCCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeec
Q 004684 12 SLLDSAYNYLVSNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKM 91 (737)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~g~~~~~~~~~p~~~~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~ 91 (737)
..|..+..|+.+++++|+|+..... + ......+||+|||||++||+||++|+++|++|+|||+++++||++.+++.
T Consensus 247 ~~i~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~ 322 (852)
T 2xag_A 247 VLVHRVHSYLERHGLINFGIYKRIK---P-LPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK 322 (852)
T ss_dssp HHHHHHHHHHHHTTSSSCSSCBCSS---C-CCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCcccccC---C-cccCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecc
Confidence 5688889999999999999865432 1 12233589999999999999999999999999999999999999999987
Q ss_pred CCCCCCccceEeccccceecCCCCcHHHHHHHHhCCCeeeecCCcceEecCCcccCchhhHHHHHHHHHHHHHHHHHHHH
Q 004684 92 EGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQL 171 (737)
Q Consensus 92 ~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 171 (737)
.+. .+|+|++++++...+++..+.+++|+....+...+.++..+|..++..........+..++.....+...
T Consensus 323 ~~~-------~~~~G~~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~v~~~~~~l~~~ 395 (852)
T 2xag_A 323 GNY-------VADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQ 395 (852)
T ss_dssp TTE-------EEESSCCEECCSBTCHHHHHHHHTTCCEEECCCCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccc-------chhcCceEecCCCCchHHHHHHHhCCchhhccccceEEecCCccccchhhhhhhhhhhhhHHHHHHHhhh
Confidence 655 9999999998877788988999999988776666667777777654332221111111111111100000
Q ss_pred hhh---hccCCCHHHHH---------------------------------------------------------------
Q 004684 172 MGE---VAMDVSLGSAL--------------------------------------------------------------- 185 (737)
Q Consensus 172 ~~~---~~~~~sl~~~l--------------------------------------------------------------- 185 (737)
... ...+.++++.+
T Consensus 396 ~~~~~~~~~~~slg~~~e~v~~~~er~~~~e~l~~~~~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~ 475 (852)
T 2xag_A 396 LDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDIT 475 (852)
T ss_dssp SCCCEETTEECBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHH
T ss_pred hhhhcccCCCccHHHHHHHhhhhhhhhcchhHHHHhhhhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccch
Confidence 000 00000110000
Q ss_pred ----------------HHHHHHh--------------cc-----CCCHHHHHHHHHHHHhhhhhchhhhhhHHHHhhccC
Q 004684 186 ----------------ETFWRVY--------------WD-----SGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQD 230 (737)
Q Consensus 186 ----------------~~~~~~~--------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~ 230 (737)
..+..+. .. ..+...+.++.|+...+++..+..+..+++..|.+.
T Consensus 476 ~e~s~rs~~~~l~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~ 555 (852)
T 2xag_A 476 AEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQD 555 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGG
T ss_pred hhhhhhhhhhhHHHHHHHHhhhhhhhhhHHHHHHhhhccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhc
Confidence 0000000 00 012222334444444444443333334444444443
Q ss_pred CCCCCCCCeeecCCCHHHHHHHHHHcCCcccCceEEEEEecCCcEEEEE-C------CeEEEecEEEEccChhhhhc--C
Q 004684 231 DPYDMGGDHCFLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLA-G------SQVFEGDMVLCTVPLGVLKS--G 301 (737)
Q Consensus 231 ~~~~~~g~~~~~~gG~~~Lv~aLa~gl~I~lnt~V~~I~~~~~~V~V~~-~------G~~i~AD~VI~AvP~~~l~~--~ 301 (737)
..+...+.++.+++|++.|+++|+++++|++|++|++|.+++++|.|++ + +++++||+||+|+|+.+|++ .
T Consensus 556 ~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~ 635 (852)
T 2xag_A 556 DDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 635 (852)
T ss_dssp GGGCCBSCCEEETTCTTHHHHHHTTTCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred cccccCCceEEecCcHHHHHHHHHhCCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhc
Confidence 3344566788999999999999999999999999999999999998886 4 57899999999999999986 3
Q ss_pred CcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEEeeccccCCCcEEEEEecchhh
Q 004684 302 SIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAA 381 (737)
Q Consensus 302 ~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~p~g~~~L~~~v~g~~a 381 (737)
.|.|.|+||..+.+++++++|+++.||++.|+++||+.+...||++......++..+++|+.. +.++|++|+.|..+
T Consensus 636 ~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~---~~pvLl~~v~G~~a 712 (852)
T 2xag_A 636 AVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAA 712 (852)
T ss_dssp SSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS---SSSEEEEEECHHHH
T ss_pred ccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC---CCCEEEEEecCcCH
Confidence 477999999999999999999999999999999999876677887765444444445555543 45688899999999
Q ss_pred hhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCCCCcHHHHhcccC---------
Q 004684 382 HKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVG--------- 452 (737)
Q Consensus 382 ~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~~~~~~l~~pv~--------- 452 (737)
..+..++++++++.++++|+++|+.. ..++|..+.+++|.++||+.|+|+++.||+....++.+.+|+.
T Consensus 713 ~~l~~lsdeel~~~~l~~L~~ifG~~--~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~ 790 (852)
T 2xag_A 713 GIMENISDDVIVGRCLAILKGIFGSS--AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAP 790 (852)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHCTT--TCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCC
T ss_pred HHHhcCCHHHHHHHHHHHHHHHhCcc--ccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcccccccccccc
Confidence 99999999999999999999999853 3468899999999999999999999999998777888888763
Q ss_pred --CCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhhhh
Q 004684 453 --DGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARAL 494 (737)
Q Consensus 453 --~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~ 494 (737)
.++|||||++|+..|+||||||+.||++||.+|++.+.+...
T Consensus 791 ~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~~ 834 (852)
T 2xag_A 791 QPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMY 834 (852)
T ss_dssp CCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCGG
T ss_pred CCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 269999999999888999999999999999999999866443
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=1.1e-48 Score=464.01 Aligned_cols=469 Identities=36% Similarity=0.658 Sum_probs=359.7
Q ss_pred hhHHHHHHHHHHHHHhhhhhcCCcccccccCCCCCCCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEe
Q 004684 9 HCHSLLDSAYNYLVSNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYT 88 (737)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~p~~~~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S 88 (737)
.+...+..++.||.++|++|+|.........+.+.....+||+|||||++||+||+.|++.|++|+|||+++++|||++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T 377 (776)
T 4gut_A 298 RCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWD 377 (776)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCTTCCCCGGGCSSCGGGTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCE
T ss_pred ccHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeee
Confidence 35677899999999999999998654333333333344689999999999999999999999999999999999999999
Q ss_pred eecCCCCCCccceEeccccceecCCCCcHHHHHHHHhCCCeeeecCCcceEecCCcccCchhhHHHHHHHHHHHHHHHHH
Q 004684 89 KKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRL 168 (737)
Q Consensus 89 ~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~ 168 (737)
.+..++ ..+|+|++++++...+++..+++++|++.........++..+|..............+..+++....+
T Consensus 378 ~~~~~G------~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ll~~~~~~ 451 (776)
T 4gut_A 378 DKSFKG------VTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEW 451 (776)
T ss_dssp ECCSTT------CCEESSCCEEECCTTCHHHHHHHHHTCCCEECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCC------eEeccCCeEEeCCccChHHHHHHHhCCcccccccccceEccCCcccchhHHHHHHHHHHHHHHHHHHH
Confidence 865432 48999999999988899999999999988777666667777777665555444444455555444443
Q ss_pred HHHhhhhccCCCHHHHHHH----HHHHhccCCCHHHHHHHHHHHHhhhhhchhhhhhHHHHhhccCCCC-CCCCCeeecC
Q 004684 169 RQLMGEVAMDVSLGSALET----FWRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPY-DMGGDHCFLP 243 (737)
Q Consensus 169 ~~~~~~~~~~~sl~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~-~~~g~~~~~~ 243 (737)
+. ......+.++...+.. +....+..........+.+....++...+..+..++...+.....+ ..++....+.
T Consensus 452 ~~-~~~~~~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~ 530 (776)
T 4gut_A 452 RK-DKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLT 530 (776)
T ss_dssp GG-GCCGGGCCBHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECT
T ss_pred hh-cccccccccHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEEC
Confidence 32 1112344555554332 1122222223322333333333344333333333333333221111 2455677889
Q ss_pred CCHHHHHHHHHHcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCC
Q 004684 244 GGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGY 322 (737)
Q Consensus 244 gG~~~Lv~aLa~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~ 322 (737)
+|++.++++|+++++|++|++|++|+.++++|.|++ +|++++||+||+|+|+.+++...+.|.|+||+.+.++++++++
T Consensus 531 ~G~~~l~~aLa~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~ 610 (776)
T 4gut_A 531 PGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGA 610 (776)
T ss_dssp TCTHHHHHHHHTTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEE
T ss_pred ChHHHHHHHHHhCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCC
Confidence 999999999999999999999999999999999988 7889999999999999999866788999999999999999999
Q ss_pred cceeEEEEEcCCccccCC---CCCcceeecCCCCCcceEEEeeccccCCCcEEEEEecchhhhhhcCCChHHHHHHHHHH
Q 004684 323 GLLNKVAMLFPYVFWETD---LDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQI 399 (737)
Q Consensus 323 ~~~~kV~l~f~~~~w~~~---~~~~g~l~~~~~~~~~~~~~~~~~~p~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~ 399 (737)
+++.||++.|+++||++. ...+|.+......++.+..+++.....+..+|++|+.|..+..+..++++++++.++++
T Consensus 611 g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~ 690 (776)
T 4gut_A 611 GIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMAT 690 (776)
T ss_dssp ECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHH
T ss_pred eeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999864 23455555433344556666665544445799999999989999999999999999999
Q ss_pred HHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHH
Q 004684 400 LKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGL 479 (737)
Q Consensus 400 L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~ 479 (737)
|+++||.. .++.|..+.+++|..+||+.|+|+++.||+....++.+.+|+. ++||||||+|+..|+||||||+.||.
T Consensus 691 L~~ifg~~--~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~-grL~FAGE~Ts~~~~gtveGAi~SG~ 767 (776)
T 4gut_A 691 LRELFKEQ--EVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQ-GTVFFAGEATNRHFPQTVTGAYLSGV 767 (776)
T ss_dssp HHHHTTTS--CCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBT-TTEEECSGGGCSSSCSSHHHHHHHHH
T ss_pred HHHHhCcc--cccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCC-CcEEEEehhhcCCCCcCHHHHHHHHH
Confidence 99999853 4678999999999999999999999999988777888888863 89999999999888999999999999
Q ss_pred HHHHHHHH
Q 004684 480 RETAKMAH 487 (737)
Q Consensus 480 ~AA~~Il~ 487 (737)
+||++|++
T Consensus 768 RaA~~Ila 775 (776)
T 4gut_A 768 REASKIAA 775 (776)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99999975
No 4
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=1.2e-44 Score=414.52 Aligned_cols=429 Identities=25% Similarity=0.327 Sum_probs=288.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEccCCCcceeeEeeec-CCCCCCccceEeccccceecCCCCcHHHHHHHH
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKRAGGRVYTKKM-EGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r~GGr~~S~~~-~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~ 124 (737)
.+||||||||+|||+||++|+++| ++|+|||+++|+|||++|.+. .|. .+|+|++|+++...+++..++.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~-------~~D~G~~~~~~~~~~~~~~~~~~ 80 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGR-------KYDIGASWHHDTLTNPLFLEEAQ 80 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGC-------EEESSCCEECCTTTCHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCc-------EEecCCeEEecCCCChHHHHHHH
Confidence 379999999999999999999999 999999999999999999886 454 99999999988767778778888
Q ss_pred hCCCe----eeecCCcc-eEecCCcccCchhhHHHHHHHHHHHHHHHHHHHHhh---hhccCCCHHHHHHHHHHHhccCC
Q 004684 125 LGSLL----HKVRDKCP-LYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLMG---EVAMDVSLGSALETFWRVYWDSG 196 (737)
Q Consensus 125 LGl~~----~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~---~~~~~~sl~~~l~~~~~~~~~~~ 196 (737)
+|+.. ........ .+..++..+.......+ ..+++....+..... ....+.++.+++..+.......+
T Consensus 81 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~l~~~~~~l 156 (516)
T 1rsg_A 81 LSLNDGRTRFVFDDDNFIYIDEERGRVDHDKELLL----EIVDNEMSKFAELEFHQHLGVSDCSFFQLVMKYLLQRRQFL 156 (516)
T ss_dssp HHHHHCCCCEECCCCCCEEEETTTEECTTCTTTCH----HHHHHHHHHHHHHHC-------CCBHHHHHHHHHHHHGGGS
T ss_pred hCCCCcceeEEECCCCEEEEcCCCccccccHHHHH----HHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhccc
Confidence 88632 11112222 22222222211011111 112222222111110 11356778887765443332334
Q ss_pred CHHHHHHHHHHHHhhhhhchhhhhhHHHHhhccCCCCCCCCCeeecCCCHHHHHHHHHHcCC---cccCceEEEEEec-C
Q 004684 197 NAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVENVP---ILYEKTVHTIRYG-S 272 (737)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~Lv~aLa~gl~---I~lnt~V~~I~~~-~ 272 (737)
.+....++...+..+....+.....++..+.... ..+..+++.+ ++.|+++|++.++ |++|++|++|..+ +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~----~~~~~~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~ 231 (516)
T 1rsg_A 157 TNDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG----HQGRNAFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPS 231 (516)
T ss_dssp CHHHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC----CSSCCEEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHhCCChHHCChHHHHhh----ccCcchhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCC
Confidence 4433333322222222111112222232222111 2233456677 9999999998874 9999999999986 6
Q ss_pred CcEEEEE-CCeEEEecEEEEccChhhhhcC---------CcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCC
Q 004684 273 DGVQVLA-GSQVFEGDMVLCTVPLGVLKSG---------SIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLD 342 (737)
Q Consensus 273 ~~V~V~~-~G~~i~AD~VI~AvP~~~l~~~---------~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~ 342 (737)
++|.|++ +|++++||+||+|+|+.+++.. .+.|.|+||+.+.+++++++|+++.||++.|+++||+++..
T Consensus 232 ~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~ 311 (516)
T 1rsg_A 232 KNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESS 311 (516)
T ss_dssp SCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCS
T ss_pred CeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCC
Confidence 6788888 7888999999999999999752 37899999999999999999999999999999999987644
Q ss_pred CcceeecCCC-------------------------------CCcceEEEeeccccCCCcEEEEEecchhhhhhcCC--Ch
Q 004684 343 TFGHLTDDSS-------------------------------SRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESM--PP 389 (737)
Q Consensus 343 ~~g~l~~~~~-------------------------------~~~~~~~~~~~~~p~g~~~L~~~v~g~~a~~~~~l--s~ 389 (737)
.+..+...+. .......+.....+.+.++|++|+.++.+..++.+ ++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~ 391 (516)
T 1rsg_A 312 KIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDK 391 (516)
T ss_dssp EEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCH
T ss_pred cEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCH
Confidence 4433322110 00001122333345577789999999999988888 88
Q ss_pred HHHHH---HHHHHHHhhcCCC----CCCCC-------CCc--eEEEecCCCCCCCCCcCCCCCCCCCCC-cHHHHhcccC
Q 004684 390 TDAVT---KVLQILKGIYEPK----GINVP-------EPI--QTVCTRWGGDPFSLGSYSNVAVGASGD-DYDIMAESVG 452 (737)
Q Consensus 390 eel~~---~vl~~L~~i~~~~----~~~vp-------~p~--~~~~~rW~~~p~~~G~ys~~~pG~~~~-~~~~l~~pv~ 452 (737)
+++++ .++++|.++||.. +...+ .|. .+.+++|..+||+.|+|+++.||.... ....+..+ .
T Consensus 392 ~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~-~ 470 (516)
T 1rsg_A 392 ERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNG-Q 470 (516)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHC-S
T ss_pred HHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccC-C
Confidence 88765 4677777777631 11111 254 889999999999999999999998542 34556543 2
Q ss_pred CCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhh
Q 004684 453 DGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANAR 492 (737)
Q Consensus 453 ~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~ 492 (737)
.++||||||+|+..|+||||||+.||++||++|++.++.+
T Consensus 471 ~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 471 DSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp SSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 3899999999998889999999999999999999988654
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=3.1e-44 Score=411.55 Aligned_cols=440 Identities=22% Similarity=0.320 Sum_probs=313.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecC-CCCCCccceEeccccceecCCCCcHHHHHHHHh
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKME-GGAGNRISASADLGGSVLTGTLGNPLGILAKQL 125 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~-g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~L 125 (737)
.+||||||||++||+||++|+++|++|+|||+++++|||++|.+.. |. .+|+|++++.+. .+.+..+++++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~-------~~d~G~~~~~~~-~~~~~~l~~~l 75 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVK-------YVDLGGSYVGPT-QNRILRLAKEL 75 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTS-------CEESSCCEECTT-CHHHHHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCc-------ccccCceEecCC-cHHHHHHHHHc
Confidence 4899999999999999999999999999999999999999999875 54 999999999876 46678899999
Q ss_pred CCCeeeecC-CcceEecCCcccCch------hhHHHHHHHHHHHHHHHHHHHHhhh----------hccCCCHHHHHHHH
Q 004684 126 GSLLHKVRD-KCPLYRLDGNSVDPE------IDMKVEADFNRLLDKASRLRQLMGE----------VAMDVSLGSALETF 188 (737)
Q Consensus 126 Gl~~~~~~~-~~~~~~~~G~~~~~~------~~~~~~~~~~~ll~~~~~~~~~~~~----------~~~~~sl~~~l~~~ 188 (737)
|++...... ...++..+|..+..+ ........+..++....++...+.. ...+.++.+++..
T Consensus 76 gl~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~- 154 (520)
T 1s3e_A 76 GLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDK- 154 (520)
T ss_dssp TCCEEECCCSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHH-
T ss_pred CCcceecccCCceEEEECCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHh-
Confidence 998765432 233444555433211 1111111222333333333221110 0234556555542
Q ss_pred HHHhccCCCHHHHHHHHHHHHhhhhhchhhhhhHHHH-hhccCC------CCCCCCCeeecCCCHHHHHHHHHH--cCCc
Q 004684 189 WRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLA-FWDQDD------PYDMGGDHCFLPGGNGRLVQALVE--NVPI 259 (737)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ls~~-~~~~~~------~~~~~g~~~~~~gG~~~Lv~aLa~--gl~I 259 (737)
...++....++.+............++..... ++.... ....++..+++.+|++.|+++|++ +++|
T Consensus 155 -----~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i 229 (520)
T 1s3e_A 155 -----LCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRV 229 (520)
T ss_dssp -----HCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHGGGE
T ss_pred -----hCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHcCCcE
Confidence 12344444444443322111111111111111 110000 011234567899999999999988 6689
Q ss_pred ccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCcccc
Q 004684 260 LYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWE 338 (737)
Q Consensus 260 ~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~ 338 (737)
++|++|++|..++++|.|++ +|++++||+||+|+|+..+.+ +.+.|.||+.+.+++++++++++.||++.|+++||+
T Consensus 230 ~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~ 307 (520)
T 1s3e_A 230 KLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWR 307 (520)
T ss_dssp ESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGG
T ss_pred EcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCccc
Confidence 99999999999988999888 888999999999999999874 557899999999999999999999999999999997
Q ss_pred CCCCCcceeecCCCCCcceEEEeeccccCC-CcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceE
Q 004684 339 TDLDTFGHLTDDSSSRGEFFLFYSYATVAG-GPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQT 417 (737)
Q Consensus 339 ~~~~~~g~l~~~~~~~~~~~~~~~~~~p~g-~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~ 417 (737)
... ..+.+..... .......++...+++ .+++++|+.+..+..|..++++++++.++++|+++|+.. .+..|..+
T Consensus 308 ~~~-~~g~~~~~~~-~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~--~~~~p~~~ 383 (520)
T 1s3e_A 308 KKD-YCGTMIIDGE-EAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSL--EALEPVHY 383 (520)
T ss_dssp GGT-EEEEEEECST-TCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCG--GGGCCSEE
T ss_pred CCC-CCceeeccCC-CCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCcc--ccCCccEE
Confidence 542 1232221111 122333445554544 478999999888888999999999999999999999742 24578889
Q ss_pred EEecCCCCCCCCCcCC-CCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhhhhcc
Q 004684 418 VCTRWGGDPFSLGSYS-NVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARALRM 496 (737)
Q Consensus 418 ~~~rW~~~p~~~G~ys-~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~~~ 496 (737)
..++|..+||+.|+|+ +..||+.....+.+++|+ +||||||++++..|+|+||||+.||++||++|++.++.. .+.
T Consensus 384 ~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~--~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~~-~~~ 460 (520)
T 1s3e_A 384 EEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPV--DRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKI-PED 460 (520)
T ss_dssp EEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCB--TTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTSS-CGG
T ss_pred EEEeeCCCCCCCCCCccccCCCccccchHHHhCCC--CCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhcC-ccc
Confidence 9999999999999998 677876543344677787 899999999987788999999999999999999998654 566
Q ss_pred cccccCCCCCchh
Q 004684 497 KVKVGKIPSKNAY 509 (737)
Q Consensus 497 ~~~~~~~~~~~~~ 509 (737)
.|+.+++++.+..
T Consensus 461 ~~~~~~~~~~~~~ 473 (520)
T 1s3e_A 461 EIWQSEPESVDVP 473 (520)
T ss_dssp GSSCCCCCCSSSC
T ss_pred cccccCCccccCC
Confidence 7888888876643
No 6
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=5.1e-41 Score=380.20 Aligned_cols=432 Identities=25% Similarity=0.428 Sum_probs=294.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecC---CCCcHHHHHH
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTG---TLGNPLGILA 122 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~---~~~~~l~~L~ 122 (737)
.+||+|||||++||+||+.|++.|+ +|+|||+++++||++++....+. .+|+|++|+++ ...+++..++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~-------~~d~g~~~~~~~~~~~~~~~~~~~ 76 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGI-------NVELGANWVEGVNGGKMNPIWPIV 76 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTE-------EEESSCCEEEEESSSSCCTHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCc-------EEeeCCeEEeccCCCCCCHHHHHH
Confidence 4899999999999999999999999 89999999999999999988765 99999999984 3346788899
Q ss_pred HH-hCCCeeeecC-C--cceEecCCcccCchhhHHHHHHHHHHHHHHHHHHHHhhh-hccCCCHHHHHHHHHHHhccCCC
Q 004684 123 KQ-LGSLLHKVRD-K--CPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLMGE-VAMDVSLGSALETFWRVYWDSGN 197 (737)
Q Consensus 123 ~~-LGl~~~~~~~-~--~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~sl~~~l~~~~~~~~~~~~ 197 (737)
++ +|+....... . ..++..+|..++.+........+..+......+...... ..++.++... ..+.........
T Consensus 77 ~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~l~~~~~~~~~ 155 (472)
T 1b37_A 77 NSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVEEMGEKLSATLHASGRDDMSILAM-QRLNEHQPNGPA 155 (472)
T ss_dssp HTTSCCCEEECCCTTGGGCEECSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHTSCTTCTTCCBHHHH-HHHHHTSSSSCC
T ss_pred HhhcCCceeeccCccccceeEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHHHH-HHHhhhcccccc
Confidence 99 9998654321 1 234556777665432211111111111111111111110 1123343221 111111110011
Q ss_pred HHHHHHHHHHHHhhhhhchhhhhhHHHHhhccCCCC-CCCCCeee--cCCCHHHHHHHHHHcC-------------Cccc
Q 004684 198 AEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPY-DMGGDHCF--LPGGNGRLVQALVENV-------------PILY 261 (737)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~-~~~g~~~~--~~gG~~~Lv~aLa~gl-------------~I~l 261 (737)
.....++.+......+.... ...++..+.....+ ..++..++ +++|++.|+++|++.+ +|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~ 233 (472)
T 1b37_A 156 TPVDMVVDYYKFDYEFAEPP--RVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQL 233 (472)
T ss_dssp SHHHHHHHHHHTHHHHSSCG--GGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEES
T ss_pred cHHHHHHHHHHHhhhhcccc--cccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEc
Confidence 11112233322221111100 00110000000000 01122222 4799999999998753 6999
Q ss_pred CceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCC
Q 004684 262 EKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETD 340 (737)
Q Consensus 262 nt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~ 340 (737)
|++|++|..++++|.|++ +|++++||+||+|+|+.++.+..+.|.|.||+.+.+++++++++++.||++.|+++||+..
T Consensus 234 ~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~ 313 (472)
T 1b37_A 234 NKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG 313 (472)
T ss_dssp SCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCS
T ss_pred CCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCC
Confidence 999999999999999888 7889999999999999999875677889999999999999999999999999999999863
Q ss_pred CCCcceeecCCCCCcceEEEeec-cccCCCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEE
Q 004684 341 LDTFGHLTDDSSSRGEFFLFYSY-ATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVC 419 (737)
Q Consensus 341 ~~~~g~l~~~~~~~~~~~~~~~~-~~p~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~ 419 (737)
...+++...+...+....+... ...++..++++++.+..+..|..++++++++.++++|+++||. ..+++|+...+
T Consensus 314 -~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg--~~~~~~~~~~~ 390 (472)
T 1b37_A 314 -KGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPG--KDVPDATDILV 390 (472)
T ss_dssp -TTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTT--SCCCCCSEEEC
T ss_pred -CCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCC--CCCCCCceEEe
Confidence 2233332222212211122211 1234567777788777677788899999999999999999953 23567888888
Q ss_pred ecCCCCCCCCCcCCCCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhhh
Q 004684 420 TRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARA 493 (737)
Q Consensus 420 ~rW~~~p~~~G~ys~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~ 493 (737)
++|..+||..|+|+.+.||.....++.+++|+ +||||||+++++.|+||||||+.||++||++|++.++.+.
T Consensus 391 ~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~--~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~ 462 (472)
T 1b37_A 391 PRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPV--GRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKM 462 (472)
T ss_dssp CCTTTCTTTSSSEEECBTTCCHHHHHHHHCCB--TTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccCCCCCCCcccCCCCCCCChhHHHHHhccC--CcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999888888755577889998 8999999999987789999999999999999999886544
No 7
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=1.8e-41 Score=385.99 Aligned_cols=415 Identities=19% Similarity=0.221 Sum_probs=286.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHHhC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LG 126 (737)
++||+|||||++||+||++|+++|++|+|||+++++|||++|.+..|. .+|+|++++++.+.+ +..+++++|
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~-------~~d~G~~~~~~~~~~-~~~~l~~lg 110 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGY-------PYEMGGTWVHWHQSH-VWREITRYK 110 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTE-------EEECSCCCBCTTSHH-HHHHHHHTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCe-------eecCCCeEecCccHH-HHHHHHHcC
Confidence 489999999999999999999999999999999999999999998765 999999999876544 666888999
Q ss_pred C--Ceeeec----CCcceEecC--CcccCchhhHHHHHHHHHHHHHHHH-----HHHHhh-----------hhccCCCHH
Q 004684 127 S--LLHKVR----DKCPLYRLD--GNSVDPEIDMKVEADFNRLLDKASR-----LRQLMG-----------EVAMDVSLG 182 (737)
Q Consensus 127 l--~~~~~~----~~~~~~~~~--G~~~~~~~~~~~~~~~~~ll~~~~~-----~~~~~~-----------~~~~~~sl~ 182 (737)
+ +..... ....+++.+ |.....+... ....+...+..... .+..+. ...++.++.
T Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 189 (495)
T 2vvm_A 111 MHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEA-EDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYS 189 (495)
T ss_dssp CTTCEEESCCCSSSCCEEEEESSTTCCEEECHHH-HHHHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSBHH
T ss_pred CcceeecccccCCCceEEEecCCCCceeecCHHH-HHHHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhhHH
Confidence 9 443331 122334444 4433332211 11112211111111 000000 001244555
Q ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHhhhhhchhhhhhHHHHhhc-cC-CCC---CCCCCeeecCCCHHHHHHHHHHc-
Q 004684 183 SALETFWRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLAFWD-QD-DPY---DMGGDHCFLPGGNGRLVQALVEN- 256 (737)
Q Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~-~~-~~~---~~~g~~~~~~gG~~~Lv~aLa~g- 256 (737)
+++... ....++..+.++.+.+...........+......+. .. ..+ ......+.+++|++.|+++|++.
T Consensus 190 ~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l 265 (495)
T 2vvm_A 190 ERIDQI----RDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWEEA 265 (495)
T ss_dssp HHHHHH----GGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHHHH
T ss_pred HHHHHh----hccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHHHh
Confidence 554422 111455555555554443322222222211111110 00 000 00123567899999999999764
Q ss_pred -----CCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEE
Q 004684 257 -----VPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAM 330 (737)
Q Consensus 257 -----l~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l 330 (737)
++|++|++|++|+.++++|.|++ +|++++||+||+|+|+.++.+ +.|.|+||+.+.++++.+.++++.||++
T Consensus 266 ~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~~~~~~kv~l 343 (495)
T 2vvm_A 266 AGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGHVSMCTKVHA 343 (495)
T ss_dssp HTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCCCCCCEEEEE
T ss_pred hhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcCCCceeEEEE
Confidence 55999999999999888899888 777899999999999999985 5578999999999999999999999999
Q ss_pred EcCCccccCCCCCcceeecCCCCCcceEEEeeccccCCCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCC
Q 004684 331 LFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGIN 410 (737)
Q Consensus 331 ~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~p~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~ 410 (737)
.|++++|. ...+....+ ....+.+.++..|.+..++++|+.. .+. +++++.++.++++|+++++.
T Consensus 344 ~~~~~~~~---~~~g~~~~~---~~~~~~~~~~~~~~~~~vl~~~~~~-~~~----~~~~e~~~~~~~~L~~~~~~---- 408 (495)
T 2vvm_A 344 EVDNKDMR---SWTGIAYPF---NKLCYAIGDGTTPAGNTHLVCFGNS-ANH----IQPDEDVRETLKAVGQLAPG---- 408 (495)
T ss_dssp EESCGGGG---GEEEEECSS---CSSCEEEEEEECTTSCEEEEEEECS-TTC----CCTTTCHHHHHHHHHTTSTT----
T ss_pred EECCccCC---CceeEecCC---CCcEEEecCCCCCCCCeEEEEEeCc-ccc----CCCHHHHHHHHHHHHHhcCC----
Confidence 99999984 122222221 1122333444455566788887743 221 45566778899999998863
Q ss_pred CCCCceEEEecCCCCCCCCCcCCCCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHh
Q 004684 411 VPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCAN 490 (737)
Q Consensus 411 vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~ 490 (737)
.+.|..+.+++|..+||+.|+|+.+.||.....++.+.+|. ++||||||+++..|+||||||+.||++||++|++.++
T Consensus 409 ~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~--~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~ 486 (495)
T 2vvm_A 409 TFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKH--GGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELG 486 (495)
T ss_dssp SCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCB--TTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcC--CCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhc
Confidence 35678889999999999999999999998655577888887 8999999999977889999999999999999999886
Q ss_pred hhh
Q 004684 491 ARA 493 (737)
Q Consensus 491 ~~~ 493 (737)
++.
T Consensus 487 ~~~ 489 (495)
T 2vvm_A 487 TKR 489 (495)
T ss_dssp CC-
T ss_pred ccc
Confidence 544
No 8
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=8.5e-42 Score=384.01 Aligned_cols=419 Identities=22% Similarity=0.325 Sum_probs=291.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHHhC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LG 126 (737)
++||+|||||++||+||++|+++|++|+|||+++++||+++|.+..|. .+|.|++++... .+.+..+++++|
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~-------~~~~g~~~~~~~-~~~~~~~~~~~g 76 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGA-------VLEIGGQWVSPD-QTALISLLDELG 76 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTE-------EEECSCCCBCTT-CHHHHHHHHHTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCc-------eeccCCeEecCc-cHHHHHHHHHcC
Confidence 379999999999999999999999999999999999999999988654 899999998765 456778999999
Q ss_pred CCeeeecC-CcceEecC-CcccCc-----hhhHHHHHHHHHHHHHHHHHHHHhhh----------hccCCCHHHHHHHHH
Q 004684 127 SLLHKVRD-KCPLYRLD-GNSVDP-----EIDMKVEADFNRLLDKASRLRQLMGE----------VAMDVSLGSALETFW 189 (737)
Q Consensus 127 l~~~~~~~-~~~~~~~~-G~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~~----------~~~~~sl~~~l~~~~ 189 (737)
+....... ...++..+ |..+.. +........+..++.....+...+.. ...+.++.+++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~- 155 (453)
T 2yg5_A 77 LKTFERYREGESVYISSAGERTRYTGDSFPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLINQ- 155 (453)
T ss_dssp CCEEECCCCSEEEEECTTSCEEEECSSSCSCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHHHH-
T ss_pred CcccccccCCCEEEEeCCCceeeccCCCCCCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHHhh-
Confidence 98654322 22233332 432211 11111111112222222222221110 02345566655421
Q ss_pred HHhccCCCHHHHHHHHHHHHhhhhhchh-hhhhHHHHh-hccCCCC-----CCCCCeeecCCCHHHHHHHHHHcC--Ccc
Q 004684 190 RVYWDSGNAEAMNLFNWHLANLEYANAS-LLSKLSLAF-WDQDDPY-----DMGGDHCFLPGGNGRLVQALVENV--PIL 260 (737)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ls~~~-~~~~~~~-----~~~g~~~~~~gG~~~Lv~aLa~gl--~I~ 260 (737)
..++....++.+........... .++...... +.....+ ..+...++++||++.|+++|++.+ +|+
T Consensus 156 -----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~ 230 (453)
T 2yg5_A 156 -----SDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEALGDDVF 230 (453)
T ss_dssp -----CSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHHGGGEE
T ss_pred -----cCCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHhcCCcEE
Confidence 23444444444433211111111 111111100 0000000 001235789999999999998854 899
Q ss_pred cCceEEEEEecCCc-EEEEECCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccC
Q 004684 261 YEKTVHTIRYGSDG-VQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWET 339 (737)
Q Consensus 261 lnt~V~~I~~~~~~-V~V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~ 339 (737)
+|++|++|..++++ |.|++++++++||+||+|+|+.++.+ +.+.|.||+.+.+++++++++++.||++.|+++||+.
T Consensus 231 ~~~~V~~i~~~~~~~v~v~~~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~ 308 (453)
T 2yg5_A 231 LNAPVRTVKWNESGATVLADGDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRE 308 (453)
T ss_dssp CSCCEEEEEEETTEEEEEETTTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGG
T ss_pred cCCceEEEEEeCCceEEEEECCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCC
Confidence 99999999999888 88877888999999999999998874 5577999999999999999999999999999999975
Q ss_pred CCCCcceeecCCCCCcceEEEeeccccCC-CcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEE
Q 004684 340 DLDTFGHLTDDSSSRGEFFLFYSYATVAG-GPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTV 418 (737)
Q Consensus 340 ~~~~~g~l~~~~~~~~~~~~~~~~~~p~g-~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~ 418 (737)
.. ..+.+... ...+.+.++.+.+++ ..++++++.++.+..|..++++++++.++++|+++|+. .+..|....
T Consensus 309 ~~-~~g~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~---~~~~p~~~~ 381 (453)
T 2yg5_A 309 DG-LSGTGFGA---SEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGP---KAEEPVVYY 381 (453)
T ss_dssp GT-EEEEEECT---TSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCG---GGGCCSEEE
T ss_pred CC-CCceeecC---CCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCc---cCCCccEEE
Confidence 42 12333221 122334445555555 46888999888888888899999999999999999974 356788889
Q ss_pred EecCCCCCCCCCcCC-CCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHh
Q 004684 419 CTRWGGDPFSLGSYS-NVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCAN 490 (737)
Q Consensus 419 ~~rW~~~p~~~G~ys-~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~ 490 (737)
.++|..+||+.|+|. ...||......+.+.+|+ +||||||++++..|+|+||||+.||++||++|++.++
T Consensus 382 ~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~--~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 382 ESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPV--GPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp ECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCB--TTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred EeecCCCCCCCCCCcCcCCCCccccchHHHhCCc--CceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 999999999999987 456775433334567777 8999999999877889999999999999999998653
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=4.3e-39 Score=366.66 Aligned_cols=421 Identities=22% Similarity=0.270 Sum_probs=285.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHHhC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LG 126 (737)
.+||+|||||++||+||+.|+++|++|+|||+++++||++.|.+.... +..+|+|++++... ...+..+++++|
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~-----~~~~~~g~~~~~~~-~~~~~~~~~~~g 106 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEA-----GWYANLGPMRLPEK-HRIVREYIRKFD 106 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTT-----TEEEESSCCCEETT-CHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCC-----CchhhcCcccccch-HHHHHHHHHHhC
Confidence 489999999999999999999999999999999999999999874311 24899999999764 356788999999
Q ss_pred CCeeeec--CCcceEecCCcccCc------------h--hh---HHHHHHHHHHHHHH-HHHHH----HhhhhccCCCHH
Q 004684 127 SLLHKVR--DKCPLYRLDGNSVDP------------E--ID---MKVEADFNRLLDKA-SRLRQ----LMGEVAMDVSLG 182 (737)
Q Consensus 127 l~~~~~~--~~~~~~~~~G~~~~~------------~--~~---~~~~~~~~~ll~~~-~~~~~----~~~~~~~~~sl~ 182 (737)
+...... ....++..+|..... . .. ......+...+... ..+.. ......++.++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 186 (498)
T 2iid_A 107 LRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYSTK 186 (498)
T ss_dssp CCEEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCHHHHHHHHTTSBHH
T ss_pred CCceeecccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccHHHHHHHhhhhhHH
Confidence 9865442 222333344432100 0 00 00111111111110 00000 000112334555
Q ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHhhhhhchhhhhhHHHHhhccCCCCCCCCCeeecCCCHHHHHHHHHHcC--Ccc
Q 004684 183 SALETFWRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVENV--PIL 260 (737)
Q Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~Lv~aLa~gl--~I~ 260 (737)
+++... ...+......+...+.............+..... +.....++.+.||++.|+++|++.+ +|+
T Consensus 187 ~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gG~~~l~~~l~~~l~~~i~ 256 (498)
T 2iid_A 187 EYLIKE-----GDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDI-----FAYEKRFDEIVDGMDKLPTAMYRDIQDKVH 256 (498)
T ss_dssp HHHHHT-----SCCCHHHHHHHHHHTTCGGGTTSBHHHHHHHHHH-----HTTCCCEEEETTCTTHHHHHHHHHTGGGEE
T ss_pred HHHHHc-----cCCCHHHHHHHHHhcCcccchhHHHHHHHHHHhc-----cccCcceEEeCCcHHHHHHHHHHhcccccc
Confidence 544321 1122322222211110000000111111111110 0112356789999999999999987 699
Q ss_pred cCceEEEEEecCCcEEEEE-CCe----EEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCc
Q 004684 261 YEKTVHTIRYGSDGVQVLA-GSQ----VFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYV 335 (737)
Q Consensus 261 lnt~V~~I~~~~~~V~V~~-~G~----~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~ 335 (737)
+|++|++|..++++|.|++ +++ +++||+||+|+|+..+. .+.|.|+||+.+.+++++++|+++.||++.|+++
T Consensus 257 ~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~ 334 (498)
T 2iid_A 257 FNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTK 334 (498)
T ss_dssp SSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSC
T ss_pred cCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCCCHHHHHHHHhCCCcceeEEEEEeCCC
Confidence 9999999999999998877 443 58999999999999886 4678899999999999999999999999999999
Q ss_pred cccCCCCCcceeecCCCCCcceEEEeec-cccCCCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCC-
Q 004684 336 FWETDLDTFGHLTDDSSSRGEFFLFYSY-ATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPE- 413 (737)
Q Consensus 336 ~w~~~~~~~g~l~~~~~~~~~~~~~~~~-~~p~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~- 413 (737)
||.+.....+....+. ....++++. ..|.+..+|++|+.++.+..|..++++++++.++++|.++++.....+..
T Consensus 335 ~w~~~~~~~~~~~~~~---~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~ 411 (498)
T 2iid_A 335 FWEDDGIHGGKSTTDL---PSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSF 411 (498)
T ss_dssp GGGGGTCCSSEEEESS---TTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CccCCCccCCcccCCC---CcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhhhhh
Confidence 9976421112212111 112344433 34667778888998888888989999999999999999999732100000
Q ss_pred CceEEEecCCCCCCCCCcCCCCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhh
Q 004684 414 PIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANA 491 (737)
Q Consensus 414 p~~~~~~rW~~~p~~~G~ys~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~ 491 (737)
.....+++|..+||+.|+|+++.|+......+.+.+|. ++|||||++++.. +|||+||+.||++||++|++.+..
T Consensus 412 ~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~--~~l~fAGe~t~~~-~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 412 CYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQ--GRIYFAGEYTAQA-HGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp EEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCB--TTEEECSGGGSSS-SSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCC--CcEEEEEcccccC-CcCHHHHHHHHHHHHHHHHHHhcC
Confidence 12367889999999999999888887655567788887 8999999999864 589999999999999999998853
No 10
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=7.2e-39 Score=357.66 Aligned_cols=402 Identities=22% Similarity=0.291 Sum_probs=272.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecC---CCCCCccceEeccccceecCCCCcHHHHHHHH
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKME---GGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~---g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~ 124 (737)
+||||||||++||+||++|+++|++|+|||+++++||++.+.... +. .+|+|++++.......+..++++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~-------~~~~g~~~~~~~~~~~~~~~~~~ 74 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGL-------RVEIGGAYLHRKHHPRLAAELDR 74 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTC-------EEESSCCCBCTTTCHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCc-------eEecCCeeeCCCCcHHHHHHHHH
Confidence 799999999999999999999999999999999999999998876 55 89999999987733456668889
Q ss_pred hCCCeeeecCCcceE--ecCCcccCc-----hhhHHHHHHHHHHHHHHHHHHHHh-----hhhccCCCHHHHHHHHHHHh
Q 004684 125 LGSLLHKVRDKCPLY--RLDGNSVDP-----EIDMKVEADFNRLLDKASRLRQLM-----GEVAMDVSLGSALETFWRVY 192 (737)
Q Consensus 125 LGl~~~~~~~~~~~~--~~~G~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~-----~~~~~~~sl~~~l~~~~~~~ 192 (737)
+|++........... ..++..... .........+..+......+.... .....+.++.+++...
T Consensus 75 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~---- 150 (431)
T 3k7m_X 75 YGIPTAAASEFTSFRHRLGPTAVDQAFPIPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDLDIPLNEYVDKL---- 150 (431)
T ss_dssp HTCCEEECCCCCEECCBSCTTCCSSSSCCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGGCSBHHHHHHHH----
T ss_pred hCCeeeecCCCCcEEEEecCCeecCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhhcCCHHHHHHhc----
Confidence 999876544332222 223322211 111112222222222111100000 0001124555554321
Q ss_pred ccCCCHHHHHHHHHHHHhhhhhchhhhhhHHHH-hhccCC-CC---CCCCCeeecCCCHHHHHHHHHHcC-CcccCceEE
Q 004684 193 WDSGNAEAMNLFNWHLANLEYANASLLSKLSLA-FWDQDD-PY---DMGGDHCFLPGGNGRLVQALVENV-PILYEKTVH 266 (737)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ls~~-~~~~~~-~~---~~~g~~~~~~gG~~~Lv~aLa~gl-~I~lnt~V~ 266 (737)
...+....++..............++..... ++.... .+ ...... .+.+|++.+++++++.. +|++|++|+
T Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~~~~~~g~i~~~~~V~ 227 (431)
T 3k7m_X 151 --DLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGSADLVDAMSQEIPEIRLQTVVT 227 (431)
T ss_dssp --TCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCTHHHHHHHHTTCSCEESSCCEE
T ss_pred --CCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcHHHHHHHHHhhCCceEeCCEEE
Confidence 2333333333332222111111111111110 000000 00 001112 67899999999998754 899999999
Q ss_pred EEEecCCcEEEEE-CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcc
Q 004684 267 TIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFG 345 (737)
Q Consensus 267 ~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g 345 (737)
+|+.++++|.|++ +|++++||+||+|+|+++++. +.+.|+||..+.+++..+.++..+||.+.|+++||. .++
T Consensus 228 ~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~----i~~ 301 (431)
T 3k7m_X 228 GIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG----IEC 301 (431)
T ss_dssp EEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT----EEE
T ss_pred EEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC----ceE
Confidence 9999999999988 777899999999999999984 678899999999999999999999999999998742 122
Q ss_pred eeecCCCCCcceEEEeecccc-CCCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCC
Q 004684 346 HLTDDSSSRGEFFLFYSYATV-AGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGG 424 (737)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~p-~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~ 424 (737)
..+.. ...++++... .+..++++++.+.. +...+ ++ .+.+.|+++++. ++ |.....++|..
T Consensus 302 --~~d~~----~~~~~~~~~~~~~~~~l~~~~~g~~---~~~~~-~~---~~~~~l~~~~~~----~~-~~~~~~~~W~~ 363 (431)
T 3k7m_X 302 --VGDGI----FPTLYDYCEVSESERLLVAFTDSGS---FDPTD-IG---AVKDAVLYYLPE----VE-VLGIDYHDWIA 363 (431)
T ss_dssp --EBSSS----SSEEEEEEECSSSEEEEEEEEETTT---CCTTC-HH---HHHHHHHHHCTT----CE-EEEEECCCTTT
T ss_pred --cCCCC----EEEEEeCcCCCCCCeEEEEEecccc---CCCCC-HH---HHHHHHHHhcCC----CC-ccEeEecccCC
Confidence 22221 1223333333 56678888887764 33233 22 456678888753 22 77888899999
Q ss_pred CCCCCCcCCCCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHH
Q 004684 425 DPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCA 489 (737)
Q Consensus 425 ~p~~~G~ys~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l 489 (737)
+||+.|+|+++.||+....++.+.+|. ++|||||++|+..|+||||||+.||++||++|+..-
T Consensus 364 d~~~~G~~~~~~~g~~~~~~~~l~~p~--g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~~ 426 (431)
T 3k7m_X 364 DPLFEGPWVAPRVGQFSRVHKELGEPA--GRIHFVGSDVSLEFPGYIEGALETAECAVNAILHSH 426 (431)
T ss_dssp CTTTSSSSCCCCTTTTTTSSGGGGSCB--TTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCcCCCCCcccHHHHhCCC--CcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhhh
Confidence 999999999999999878889999997 899999999998899999999999999999999753
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=2.2e-37 Score=351.71 Aligned_cols=425 Identities=20% Similarity=0.299 Sum_probs=279.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCC----CC------CccceEeccccceecCCCC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGG----AG------NRISASADLGGSVLTGTLG 115 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~----~g------~~~~~~~D~G~~~~~~~~~ 115 (737)
+.+||+|||||++||+||++|+++|++|+|||+++++||+++|.+..+. .+ -..+..+|.|++++...+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 88 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH- 88 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS-
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH-
Confidence 3489999999999999999999999999999999999999999876310 00 002348999999988765
Q ss_pred cHHHHHHHHhCCCeeeecC--CcceEe-cC-----CcccCchhhHHHHHHHHHHHHHHHHHHHHhhhhc------cCCCH
Q 004684 116 NPLGILAKQLGSLLHKVRD--KCPLYR-LD-----GNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVA------MDVSL 181 (737)
Q Consensus 116 ~~l~~L~~~LGl~~~~~~~--~~~~~~-~~-----G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~------~~~sl 181 (737)
.+..+++++|+....... ...+++ .+ |..+..+... ...+..+.+........ ..+. ++.++
T Consensus 89 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~ 164 (489)
T 2jae_A 89 -ITLDYCRELGVEIQGFGNQNANTFVNYQSDTSLSGQSVTYRAAK--ADTFGYMSELLKKATDQ-GALDQVLSREDKDAL 164 (489)
T ss_dssp -THHHHHHHHTCCEEEECCCCTTSEEECCCSSTTTTCCEEHHHHH--HHHHHHHHHHHHHHHHH-TTTTTTSCHHHHHHH
T ss_pred -HHHHHHHHcCCceEEccccCCCceEEecCCcccCCccccHHHHh--hhhhccHHHHHHHHHhc-cccccccchhhHHHH
Confidence 577799999998765432 223343 34 5544432211 01111111111111100 0111 11123
Q ss_pred HHHHHHHHHHhccCCC-----HHHHH-HHHHHHHhhhhhc----hhhhhhHHHH-hhc---cCCCCCCCCCeeecCCCHH
Q 004684 182 GSALETFWRVYWDSGN-----AEAMN-LFNWHLANLEYAN----ASLLSKLSLA-FWD---QDDPYDMGGDHCFLPGGNG 247 (737)
Q Consensus 182 ~~~l~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~----~~~l~~ls~~-~~~---~~~~~~~~g~~~~~~gG~~ 247 (737)
.+++.. ++.... ..... ++.. ........ ...+..+... ++. ..........+++++||++
T Consensus 165 ~~~l~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~ 239 (489)
T 2jae_A 165 SEFLSD----FGDLSDDGRYLGSSRRGYDSE-PGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMMFTPVGGMD 239 (489)
T ss_dssp HHHHHH----HTTCCTTSCCCCCGGGCEEEC-CCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSEEEETTCTT
T ss_pred HHHHHH----hhhhhhccccccccchhhccC-CCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCccEEeecCCHH
Confidence 333322 111100 00000 0000 00000000 0011222211 111 0011222346788999999
Q ss_pred HHHHHHHHcCC---cccCceEEEEEecCCcEEEEE-CC---eEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhc
Q 004684 248 RLVQALVENVP---ILYEKTVHTIRYGSDGVQVLA-GS---QVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRL 320 (737)
Q Consensus 248 ~Lv~aLa~gl~---I~lnt~V~~I~~~~~~V~V~~-~G---~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l 320 (737)
.|+++|++.+. |++|++|++|..++++|.|++ +| ++++||+||+|+|+.++.+ +.+ +||+.+.++++++
T Consensus 240 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l~~~~~~~l~~~ 315 (489)
T 2jae_A 240 RIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN--NLPGDVLTALKAA 315 (489)
T ss_dssp HHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--CCCHHHHHHHHTE
T ss_pred HHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--CCCHHHHHHHHhC
Confidence 99999998764 999999999999999999887 55 6899999999999999875 333 7899999999999
Q ss_pred CCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEEeeccc-c-CCCcEEEEEecchhhhhhcCCChHHHHHHHHH
Q 004684 321 GYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYAT-V-AGGPLLIALVAGEAAHKFESMPPTDAVTKVLQ 398 (737)
Q Consensus 321 ~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~-p-~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~ 398 (737)
+|++..||++.|+++||++....+|.+.... .....++++... + +...++++|+.+..+..|..++++++++.+++
T Consensus 316 ~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~--~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~ 393 (489)
T 2jae_A 316 KPSSSGKLGIEYSRRWWETEDRIYGGASNTD--KDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIA 393 (489)
T ss_dssp ECCCEEEEEEEESSCHHHHTTCCCSCEEEES--STTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHH
T ss_pred CCccceEEEEEeCCCCccCCCCcccccccCC--CCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHH
Confidence 9999999999999999986545554432211 112233333322 1 22334456888888888999999999999999
Q ss_pred HHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCC------CCCCCCcHHHHhcccCCCcEEEeccccccccCceee
Q 004684 399 ILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVA------VGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMH 472 (737)
Q Consensus 399 ~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~------pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~e 472 (737)
+|+++|+.. ..+.+.....++|..+||+.|+|..+. ||.....++.+.+|. +||||||++++. +.++|+
T Consensus 394 ~L~~~~~~~--~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~l~faG~~~~~-~~~~v~ 468 (489)
T 2jae_A 394 EGSEIHGEK--YTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPV--DKIYFAGDHLSN-AIAWQH 468 (489)
T ss_dssp HHHHHHCGG--GGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCB--TTEEECSGGGBS-STTSHH
T ss_pred HHHHHcCcc--hhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCC--CcEEEeEHHhcc-CccHHH
Confidence 999999740 123566677889999999999998776 777656677888887 899999999975 578999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 004684 473 GAFLSGLRETAKMAHCANA 491 (737)
Q Consensus 473 GAi~SG~~AA~~Il~~l~~ 491 (737)
||+.||++||++|++.+..
T Consensus 469 gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 469 GALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988754
No 12
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=3e-37 Score=347.62 Aligned_cols=407 Identities=20% Similarity=0.204 Sum_probs=273.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC------CcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHH
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG------FRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGI 120 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G------~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~ 120 (737)
.+||+|||||++||+||++|+++| ++|+|||+++++||+++|....|. .+|.|++++...+.+ +..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~-------~~d~G~~~~~~~~~~-~~~ 76 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGY-------IIERGPDSFLERKKS-APQ 76 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTC-------CEESSCCCEETTCTH-HHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCE-------EeccChhhhhhCCHH-HHH
Confidence 379999999999999999999999 999999999999999999988766 999999998877544 677
Q ss_pred HHHHhCCCeeeec--CCcceEecCCcccCchhhH------HHHHH-HHHHHHH---HHHHHHHhh---hhccCCCHHHHH
Q 004684 121 LAKQLGSLLHKVR--DKCPLYRLDGNSVDPEIDM------KVEAD-FNRLLDK---ASRLRQLMG---EVAMDVSLGSAL 185 (737)
Q Consensus 121 L~~~LGl~~~~~~--~~~~~~~~~G~~~~~~~~~------~~~~~-~~~ll~~---~~~~~~~~~---~~~~~~sl~~~l 185 (737)
+++++|+...... ....+++.+|.....+... ..... ...++.. ......... ...++.++.+++
T Consensus 77 l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 156 (470)
T 3i6d_A 77 LVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFF 156 (470)
T ss_dssp HHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCSHHHHHHHHSCCCSSSSCCBHHHHH
T ss_pred HHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHHHhcCcccCCCCCCCCcCHHHHH
Confidence 9999999765432 2334455566544322111 00000 0011111 111111111 113466676665
Q ss_pred HHHHHHhccCCCHH-HHHHHHHHHHhhhhhchhhhhhHHHH-hhcc----CC------------------CCCCCCCeee
Q 004684 186 ETFWRVYWDSGNAE-AMNLFNWHLANLEYANASLLSKLSLA-FWDQ----DD------------------PYDMGGDHCF 241 (737)
Q Consensus 186 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ls~~-~~~~----~~------------------~~~~~g~~~~ 241 (737)
.. . .... ...++.+............++..... .+.. .. .....+.++.
T Consensus 157 ~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (470)
T 3i6d_A 157 RR---R----VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQT 229 (470)
T ss_dssp HH---H----SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEE
T ss_pred HH---h----cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEE
Confidence 43 1 1122 12222332222221121111111100 0000 00 0011345778
Q ss_pred cCCCHHHHHHHHHHcC---CcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHH
Q 004684 242 LPGGNGRLVQALVENV---PILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAI 317 (737)
Q Consensus 242 ~~gG~~~Lv~aLa~gl---~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai 317 (737)
+++|++.|+++|++.+ +|++|++|++|+.++++|.|++ +|++++||+||+|+|+..+.+ +...| | ..+++
T Consensus 230 ~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~--l~~~~--~--~~~~~ 303 (470)
T 3i6d_A 230 LSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAG--MLSEL--P--AISHL 303 (470)
T ss_dssp ETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHH--HTTTS--T--THHHH
T ss_pred eCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHH--HcCCc--h--hhHHH
Confidence 8999999999999988 6999999999999999999988 787899999999999999886 22223 2 25788
Q ss_pred HhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEEe-----eccccCCCcEEEEEecchhhhhhcCCChHHH
Q 004684 318 KRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFY-----SYATVAGGPLLIALVAGEAAHKFESMPPTDA 392 (737)
Q Consensus 318 ~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~-----~~~~p~g~~~L~~~v~g~~a~~~~~ls~eel 392 (737)
+++++.++.+|++.|++++|+.+...++++.+.........+.+ +...|.+..++++++.+..+..+..++++++
T Consensus 304 ~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 383 (470)
T 3i6d_A 304 KNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDI 383 (470)
T ss_dssp HTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHH
T ss_pred hcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHH
Confidence 99999999999999999999877667788776543322222222 3345667778899998777777888999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCCC---CcHHHHhcccCCCcEEEeccccccccCc
Q 004684 393 VTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASG---DDYDIMAESVGDGRLFFAGEATIRRYPA 469 (737)
Q Consensus 393 ~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~---~~~~~l~~pv~~~~L~fAGd~ts~~~~g 469 (737)
++.++++|.++|+.. +.|....+++|.. ++..+.+|... ..++.+.++. +||||||+++.. .
T Consensus 384 ~~~~~~~l~~~~g~~----~~p~~~~~~~w~~------a~p~~~~g~~~~~~~~~~~l~~~~--~~l~~aG~~~~g---~ 448 (470)
T 3i6d_A 384 INIVLEDLKKVMNIN----GEPEMTCVTRWHE------SMPQYHVGHKQRIKELREALASAY--PGVYMTGASFEG---V 448 (470)
T ss_dssp HHHHHHHHGGGSCCC----SCCSEEEEEEEEE------EEEECBTTHHHHHHHHHHHHHHHS--TTEEECSTTTSC---C
T ss_pred HHHHHHHHHHHhCCC----CCceEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhhC--CCEEEEeecCCC---C
Confidence 999999999999752 5788889999965 23333444321 2234566676 799999999863 3
Q ss_pred eeeHHHHHHHHHHHHHHHHH
Q 004684 470 TMHGAFLSGLRETAKMAHCA 489 (737)
Q Consensus 470 ~~eGAi~SG~~AA~~Il~~l 489 (737)
+|++|+.||+++|++|++.+
T Consensus 449 gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 449 GIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 69999999999999999876
No 13
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=1.2e-36 Score=344.34 Aligned_cols=412 Identities=16% Similarity=0.146 Sum_probs=267.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHHhC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LG 126 (737)
++||+|||||++||+||+.|+++|++|+|||+++++|||++|.+..|. .+|.|++++... ...+..+++++|
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~-------~~~~g~~~~~~~-~~~~~~~~~~~g 87 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGY-------LVEQGPNSFLDR-EPATRALAAALN 87 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTE-------EEESSCCCEETT-CHHHHHHHHHTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCe-------eeecChhhhhhh-hHHHHHHHHHcC
Confidence 489999999999999999999999999999999999999999998765 999999999875 356778999999
Q ss_pred CCeeeec----CCcceEecCCcccCchhhHHHHHHHH-H---HHHHHHHHHHHhhh---hccCCCHHHHHHHHHHHhccC
Q 004684 127 SLLHKVR----DKCPLYRLDGNSVDPEIDMKVEADFN-R---LLDKASRLRQLMGE---VAMDVSLGSALETFWRVYWDS 195 (737)
Q Consensus 127 l~~~~~~----~~~~~~~~~G~~~~~~~~~~~~~~~~-~---ll~~~~~~~~~~~~---~~~~~sl~~~l~~~~~~~~~~ 195 (737)
+...... ....+++.+|..+..+.+.. ..+. . +.+....+...+.. ..++.++.+++... +.
T Consensus 88 l~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~---~~-- 160 (478)
T 2ivd_A 88 LEGRIRAADPAAKRRYVYTRGRLRSVPASPP--AFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRH---LG-- 160 (478)
T ss_dssp CGGGEECSCSSCCCEEEEETTEEEECCCSHH--HHHTCSSSCHHHHHHHHGGGGCCCCCTTCCCBHHHHHHHH---TC--
T ss_pred CcceeeecCccccceEEEECCEEEECCCCHH--HhccCCCCCHHHHHHHhhhhhcCCCCCCCCCCHHHHHHHh---hC--
Confidence 9643321 22345566776544332211 0000 0 00111111111111 13456777776531 11
Q ss_pred CCHHHHHHHHHHHHhhhhhchhhh--------------------hhHHHHh--hc-----cCCCCCCCCCeeecCCCHHH
Q 004684 196 GNAEAMNLFNWHLANLEYANASLL--------------------SKLSLAF--WD-----QDDPYDMGGDHCFLPGGNGR 248 (737)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~l--------------------~~ls~~~--~~-----~~~~~~~~g~~~~~~gG~~~ 248 (737)
.+....++.+............+ ..+.... .. ....+...+..+++++|+++
T Consensus 161 -~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~ 239 (478)
T 2ivd_A 161 -HRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQV 239 (478)
T ss_dssp -HHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHH
T ss_pred -HHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHH
Confidence 11111222222111110000000 0000000 00 00001111567899999999
Q ss_pred HHHHHHHcC--CcccCceEEEEEecCCcEEEEE----CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCC
Q 004684 249 LVQALVENV--PILYEKTVHTIRYGSDGVQVLA----GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGY 322 (737)
Q Consensus 249 Lv~aLa~gl--~I~lnt~V~~I~~~~~~V~V~~----~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~ 322 (737)
|+++|++.+ +|+++++|++|..++++|.|++ +|++++||+||+|+|+..+.+ +.|.+|+.+.++++++++
T Consensus 240 l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~----ll~~l~~~~~~~l~~~~~ 315 (478)
T 2ivd_A 240 LIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAK----LLRPLDDALAALVAGIAY 315 (478)
T ss_dssp HHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHH----HHTTTCHHHHHHHHTCCB
T ss_pred HHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHH----HhhccCHHHHHHHhcCCC
Confidence 999998865 8999999999999888888875 577899999999999999875 347799999999999999
Q ss_pred cceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEEeec-----cccCCCcEEEEEecchhhhhhcCCChHHHHHHHH
Q 004684 323 GLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSY-----ATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVL 397 (737)
Q Consensus 323 ~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~-----~~p~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl 397 (737)
+++.+|++.|++++|+.+ ..++.+.+.........+.++. ..|++..++++++.+..+..+..++++++.+.++
T Consensus 316 ~~~~~v~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (478)
T 2ivd_A 316 APIAVVHLGFDAGTLPAP-DGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAR 394 (478)
T ss_dssp CCEEEEEEEECTTSSCCC-CSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHH
T ss_pred CcEEEEEEEEccccCCCC-CceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHH
Confidence 999999999999999764 4455554321112222333322 2355667888999887777777889999999999
Q ss_pred HHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCCCCcHHHHhcccC-CCcEEEeccccccccCceeeHHHH
Q 004684 398 QILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVG-DGRLFFAGEATIRRYPATMHGAFL 476 (737)
Q Consensus 398 ~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~~~~~~l~~pv~-~~~L~fAGd~ts~~~~g~~eGAi~ 476 (737)
++|.++|+.. ..|....+++|.. ++..+.+|... ....+..+.. .+||||||+++.. ++|+||+.
T Consensus 395 ~~l~~~~~~~----~~p~~~~~~~w~~------~~p~~~~g~~~-~~~~~~~~~~~~~~l~~aG~~~~g---~gv~gA~~ 460 (478)
T 2ivd_A 395 EELKALAGVT----ARPSFTRVFRWPL------GIPQYNLGHLE-RVAAIDAALQRLPGLHLIGNAYKG---VGLNDCIR 460 (478)
T ss_dssp HHHHHHHCCC----SCCSEEEEEEESS------CCBCCBTTHHH-HHHHHHHHHHTSTTEEECSTTTSC---CSHHHHHH
T ss_pred HHHHHHhCCC----CCCcEEEEEECCC------cccCCCcCHHH-HHHHHHHHHhhCCCEEEEccCCCC---CCHHHHHH
Confidence 9999999753 3577777889965 34344455421 1111211111 2799999999842 46999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q 004684 477 SGLRETAKMAHCANARA 493 (737)
Q Consensus 477 SG~~AA~~Il~~l~~~~ 493 (737)
||++||++|+..++.+.
T Consensus 461 SG~~aA~~i~~~l~~~~ 477 (478)
T 2ivd_A 461 NAAQLADALVAGNTSHA 477 (478)
T ss_dssp HHHHHHHHHCC------
T ss_pred HHHHHHHHHHHhhccCC
Confidence 99999999998776554
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=8.6e-36 Score=339.77 Aligned_cols=414 Identities=19% Similarity=0.189 Sum_probs=267.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHHhC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LG 126 (737)
.+||+|||||++||+||++|+++|++|+|||+++++||+++|.+..|. .+|.|++++...+ ..+..+++++|
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~-------~~~~g~~~~~~~~-~~~~~~~~~lg 84 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGL-------IWDEGANTMTESE-GDVTFLIDSLG 84 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTE-------EEESSCCCBCCCS-HHHHHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCe-------EEecCCcccccCc-HHHHHHHHHcC
Confidence 489999999999999999999999999999999999999999988765 9999999998654 45777999999
Q ss_pred CCeeeec---CCcceEecCCcccCchhhHHH--H-------HHHHHHHHHHHH-HHHHhhhhccCCCHHHHHHHHHHHhc
Q 004684 127 SLLHKVR---DKCPLYRLDGNSVDPEIDMKV--E-------ADFNRLLDKASR-LRQLMGEVAMDVSLGSALETFWRVYW 193 (737)
Q Consensus 127 l~~~~~~---~~~~~~~~~G~~~~~~~~~~~--~-------~~~~~ll~~~~~-~~~~~~~~~~~~sl~~~l~~~~~~~~ 193 (737)
+...... ....+++.+|..+..+.+... . ..+..+...... ..........+.++.+|+... ++
T Consensus 85 l~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~---~~ 161 (504)
T 1sez_A 85 LREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRH---FG 161 (504)
T ss_dssp CGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHH---HC
T ss_pred CcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHHhHhhhccCcccccccCCCCccHHHHHHHH---cC
Confidence 9754322 223455677766543322110 0 000000000000 000000113457777776532 11
Q ss_pred cCCCHHHHHHHHHHHHhhhhhchhhhh--------------------hHHHHhhccC-C----------CCCCCCCeeec
Q 004684 194 DSGNAEAMNLFNWHLANLEYANASLLS--------------------KLSLAFWDQD-D----------PYDMGGDHCFL 242 (737)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~l~--------------------~ls~~~~~~~-~----------~~~~~g~~~~~ 242 (737)
. +....++.+............++ .+....+... . ........+++
T Consensus 162 ~---~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (504)
T 1sez_A 162 K---EVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSF 238 (504)
T ss_dssp H---HHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEE
T ss_pred H---HHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEee
Confidence 1 11111222221111111111100 0000000000 0 00012346788
Q ss_pred CCCHHHHHHHHHHcC---CcccCceEEEEEecCCc------EEEEE---CC---eEEEecEEEEccChhhhhcCCcc-cC
Q 004684 243 PGGNGRLVQALVENV---PILYEKTVHTIRYGSDG------VQVLA---GS---QVFEGDMVLCTVPLGVLKSGSIK-FI 306 (737)
Q Consensus 243 ~gG~~~Lv~aLa~gl---~I~lnt~V~~I~~~~~~------V~V~~---~G---~~i~AD~VI~AvP~~~l~~~~i~-~~ 306 (737)
+||+++|+++|++.+ +|++|++|++|..++++ +.|++ +| ++++||+||+|+|+..+.+.... ..
T Consensus 239 ~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~ 318 (504)
T 1sez_A 239 LGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRG 318 (504)
T ss_dssp TTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSS
T ss_pred CcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccC
Confidence 999999999999876 59999999999998887 77765 35 57899999999999999862210 01
Q ss_pred CCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCC---cceE-E----EeeccccCCCcEEEEEecc
Q 004684 307 PELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSR---GEFF-L----FYSYATVAGGPLLIALVAG 378 (737)
Q Consensus 307 p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~---~~~~-~----~~~~~~p~g~~~L~~~v~g 378 (737)
+++++. .+..+.+.++.+|++.|++++|..+...++.+.+..... .... . .++...|++..++++|+.+
T Consensus 319 ~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g 395 (504)
T 1sez_A 319 NPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGG 395 (504)
T ss_dssp SBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEES
T ss_pred CcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeCC
Confidence 234332 266778889999999999999987666677666432210 1111 1 2333456677788999998
Q ss_pred hhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCCCC--cHHHHhcccCCCcE
Q 004684 379 EAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGD--DYDIMAESVGDGRL 456 (737)
Q Consensus 379 ~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~~--~~~~l~~pv~~~~L 456 (737)
..+..|..++++++++.++++|+++++.. ..|....+++|... |..+.+|.... ......+|+ +||
T Consensus 396 ~~~~~~~~~~~ee~~~~v~~~L~~~~g~~----~~p~~~~~~~w~~~------~p~~~~g~~~~~~~~~~~~~~~--~~l 463 (504)
T 1sez_A 396 SRNRELAKASRTELKEIVTSDLKQLLGAE----GEPTYVNHLYWSKA------FPLYGHNYDSVLDAIDKMEKNL--PGL 463 (504)
T ss_dssp TTCGGGTTCCHHHHHHHHHHHHHHHHCBC----SCCSSEEEEEEEEE------EECCCTTHHHHHHHHHHHHHHS--TTE
T ss_pred CCcccccCCCHHHHHHHHHHHHHHHhCCC----CCCeEEEEeECCCC------CCccCcCHHHHHHHHHHHHHhC--CCE
Confidence 88888888999999999999999999853 35777888999652 33333432111 112344566 899
Q ss_pred EEeccccccccCceeeHHHHHHHHHHHHHHHHHhhh
Q 004684 457 FFAGEATIRRYPATMHGAFLSGLRETAKMAHCANAR 492 (737)
Q Consensus 457 ~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~ 492 (737)
||||++++. ++|+||+.||++||++|++.++..
T Consensus 464 ~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 464 FYAGNHRGG---LSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp EECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999862 589999999999999999987543
No 15
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=3.2e-35 Score=341.95 Aligned_cols=258 Identities=14% Similarity=0.116 Sum_probs=188.2
Q ss_pred CCCeeecCCCHHHHHHHHHHcC----CcccCceEE--EEEecCCc-------EEEEE--CCe--EEEecEEEEccChhhh
Q 004684 236 GGDHCFLPGGNGRLVQALVENV----PILYEKTVH--TIRYGSDG-------VQVLA--GSQ--VFEGDMVLCTVPLGVL 298 (737)
Q Consensus 236 ~g~~~~~~gG~~~Lv~aLa~gl----~I~lnt~V~--~I~~~~~~-------V~V~~--~G~--~i~AD~VI~AvP~~~l 298 (737)
+..++.+.||+++|+++|++.+ .|+++++|+ +|..++++ |+|++ +|+ +++||+||+|+|+.++
T Consensus 336 ~~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L 415 (721)
T 3ayj_A 336 SNEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQL 415 (721)
T ss_dssp TCEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHH
T ss_pred ccceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHH
Confidence 3457888999999999998754 599999999 99987655 88855 566 7999999999999998
Q ss_pred hc----CCcc-------c--------------CCC-C-C-------HHHHHHHHhcCCcceeEEEEEc-----CCccccC
Q 004684 299 KS----GSIK-------F--------------IPE-L-P-------QRKLDAIKRLGYGLLNKVAMLF-----PYVFWET 339 (737)
Q Consensus 299 ~~----~~i~-------~--------------~p~-L-p-------~~~~~ai~~l~~~~~~kV~l~f-----~~~~w~~ 339 (737)
.. ..|. + .|+ | | ..+.+++++++|++..||++.| +++||++
T Consensus 416 ~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~ 495 (721)
T 3ayj_A 416 TPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQ 495 (721)
T ss_dssp HHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCE
T ss_pred hhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccc
Confidence 52 2344 2 343 6 8 8999999999999999999999 9999987
Q ss_pred CCC-CcceeecCCCCCcceEEEe-----eccccCCCcEEEEEecchhhhhh------cCCChHHH-------HHHHHHHH
Q 004684 340 DLD-TFGHLTDDSSSRGEFFLFY-----SYATVAGGPLLIALVAGEAAHKF------ESMPPTDA-------VTKVLQIL 400 (737)
Q Consensus 340 ~~~-~~g~l~~~~~~~~~~~~~~-----~~~~p~g~~~L~~~v~g~~a~~~------~~ls~eel-------~~~vl~~L 400 (737)
+.. ..+....+...+. .+++. ++..+..+.++.+|++++.+..| ..+++++. ++.++++|
T Consensus 496 ~~g~~i~~s~TD~~~r~-~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~l 574 (721)
T 3ayj_A 496 WRGEPIKAVVSDSGLAA-SYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRA 574 (721)
T ss_dssp ETTEECCEEEETTTTEE-EEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHT
T ss_pred cCCCCceeeecCCCcce-EEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHH
Confidence 611 1122222221111 12221 22333344578899999999888 56666666 99999999
Q ss_pred H--hhcCCCCC----------CCCCCceEEEecCCCCCCCCCcCCCCCCCCCCC--cHHH----HhcccCCCcEEEeccc
Q 004684 401 K--GIYEPKGI----------NVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGD--DYDI----MAESVGDGRLFFAGEA 462 (737)
Q Consensus 401 ~--~i~~~~~~----------~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~~--~~~~----l~~pv~~~~L~fAGd~ 462 (737)
. ++|+.... ..-.+.+...++|..+| +.|+|..+.||+... .+.. ...|..+++||||||+
T Consensus 575 a~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~ 653 (721)
T 3ayj_A 575 YRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDS 653 (721)
T ss_dssp CCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGG
T ss_pred hhhccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehh
Confidence 9 88864210 00013456889999999 999999999998310 0111 1123345899999999
Q ss_pred cccccCceeeHHHHHHHHHHHHHHHHHhhhhhcc
Q 004684 463 TIRRYPATMHGAFLSGLRETAKMAHCANARALRM 496 (737)
Q Consensus 463 ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~~~ 496 (737)
++. ++||||||+.||.+||..|+..++...+..
T Consensus 654 ~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~~~~~ 686 (721)
T 3ayj_A 654 YSH-LGGWLEGAFMSALNAVAGLIVRANRGDVSA 686 (721)
T ss_dssp GSS-CTTSHHHHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred hcc-CCceehHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 985 689999999999999999999998877644
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=7.1e-35 Score=329.70 Aligned_cols=407 Identities=18% Similarity=0.147 Sum_probs=269.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC--CcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHH
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~ 124 (737)
++||+|||||++||+||++|+++| ++|+|||+++++||++.|....|. .+|.|++++...+. .+..++++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~-------~~~~g~~~~~~~~~-~~~~l~~~ 75 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGF-------TIERGPDSYVARKH-ILTDLIEA 75 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTC-------CEESSCCCEETTST-HHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCE-------EEecCchhhhcccH-HHHHHHHH
Confidence 389999999999999999999999 999999999999999999988766 99999999887654 47779999
Q ss_pred hCCCeeeec--CCcceEecCCcccCchhhH------HHHH--------HHHHHHHHHHHHHHHhhh----hccCCCHHHH
Q 004684 125 LGSLLHKVR--DKCPLYRLDGNSVDPEIDM------KVEA--------DFNRLLDKASRLRQLMGE----VAMDVSLGSA 184 (737)
Q Consensus 125 LGl~~~~~~--~~~~~~~~~G~~~~~~~~~------~~~~--------~~~~ll~~~~~~~~~~~~----~~~~~sl~~~ 184 (737)
+|++..... ....+++.+|.....+... .... ....+ ....+...... ..++.++.++
T Consensus 76 lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 76 IGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQ--EVADLLLHPSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp TTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHH--HHHHHHHSCCTTCCCCSSCCBHHHH
T ss_pred cCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHH--HhhCcccCCcccccCCCCCcCHHHH
Confidence 999865443 2334444555544322100 0000 00011 01111111111 2356677777
Q ss_pred HHHHHHHhccCCCHHHHHHHHHHHHhhhhhchhhhh------h----------HHHHhhccC----------CCCCCCCC
Q 004684 185 LETFWRVYWDSGNAEAMNLFNWHLANLEYANASLLS------K----------LSLAFWDQD----------DPYDMGGD 238 (737)
Q Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~----------ls~~~~~~~----------~~~~~~g~ 238 (737)
+... ++ .+....++.+............++ . +........ .....++.
T Consensus 154 l~~~---~~---~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (475)
T 3lov_A 154 LRPR---LG---DALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQ 227 (475)
T ss_dssp HHHH---HC---HHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCS
T ss_pred HHHH---hC---HHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCc
Confidence 6531 11 111122222222222111111110 0 000000000 00012456
Q ss_pred eeecCCCHHHHHHHHHHcC---CcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHH
Q 004684 239 HCFLPGGNGRLVQALVENV---PILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKL 314 (737)
Q Consensus 239 ~~~~~gG~~~Lv~aLa~gl---~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~ 314 (737)
++++++|++.|+++|++.+ +|++|++|++|+.++++|.|++ +| +++||+||+|+|+..+.+ +...+++
T Consensus 228 ~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~--ll~~~~~----- 299 (475)
T 3lov_A 228 FLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ--LLPDAHL----- 299 (475)
T ss_dssp EEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH--HCTTSCC-----
T ss_pred EEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH--HcCccCH-----
Confidence 7889999999999999987 6999999999999999999888 66 899999999999999886 2223322
Q ss_pred HHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEEee-----ccccCCCcEEEEEecchhhhhhcCCCh
Q 004684 315 DAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYS-----YATVAGGPLLIALVAGEAAHKFESMPP 389 (737)
Q Consensus 315 ~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~-----~~~p~g~~~L~~~v~g~~a~~~~~ls~ 389 (737)
++++++++.++.+|++.|++++ ..+...++++.+.........+.++ ...|. ..++++|+.+..+..+..+++
T Consensus 300 ~~~~~~~~~~~~~v~l~~~~~~-~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~ 377 (475)
T 3lov_A 300 PELEQLTTHSTATVTMIFDQQQ-SLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESD 377 (475)
T ss_dssp HHHHTCCEEEEEEEEEEEECCS-SCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCH
T ss_pred HHHhcCCCCeEEEEEEEECCcC-CCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCH
Confidence 7789999999999999999998 4455667777754433322223332 22344 567888887777777888999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCC---CCcHHHHhcccCCCcEEEeccccccc
Q 004684 390 TDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGAS---GDDYDIMAESVGDGRLFFAGEATIRR 466 (737)
Q Consensus 390 eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~---~~~~~~l~~pv~~~~L~fAGd~ts~~ 466 (737)
+++++.++++|.++|+.. +.|....+++|... +..+.+|.. ...++.+.++. +||||||+++..
T Consensus 378 e~~~~~~~~~L~~~~g~~----~~p~~~~v~~w~~a------~p~~~~g~~~~~~~~~~~l~~~~--~~l~~aG~~~~g- 444 (475)
T 3lov_A 378 EVLQQAVLQDLEKICGRT----LEPKQVIISRLMDG------LPAYTVGHADRIQRVREEVLAQY--PGIYLAGLAYDG- 444 (475)
T ss_dssp HHHHHHHHHHHHHHHSSC----CCCSEEEEEEEEEE------EECCCTTHHHHHHHHHHHHHHHS--TTEEECSTTTSC-
T ss_pred HHHHHHHHHHHHHHhCCC----CCCeEEEEEEcccC------CCCCCCChHHHHHHHHHHHHhhC--CCEEEEccCCCC-
Confidence 999999999999999853 47788899999763 222334431 12234566676 799999999873
Q ss_pred cCceeeHHHHHHHHHHHHHHHHHhhhhh
Q 004684 467 YPATMHGAFLSGLRETAKMAHCANARAL 494 (737)
Q Consensus 467 ~~g~~eGAi~SG~~AA~~Il~~l~~~~~ 494 (737)
.+|++|+.||++||++|+..++....
T Consensus 445 --~g~~~a~~sG~~aA~~i~~~l~~~~~ 470 (475)
T 3lov_A 445 --VGLPDCVASAKTMIESIELEQSHTDE 470 (475)
T ss_dssp --SSHHHHHHHHHHHHHHHHHTC-----
T ss_pred --CCHHHHHHHHHHHHHHHHHHhhcccc
Confidence 46999999999999999998755443
No 17
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=7.9e-34 Score=321.04 Aligned_cols=403 Identities=18% Similarity=0.188 Sum_probs=260.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCC--CcHHHHHHH
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTL--GNPLGILAK 123 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~--~~~l~~L~~ 123 (737)
+||+|||||++||+||++|+++|+ +|+|||+++++||+++|....++ ..+|.|++++.... ...+..+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g------~~~d~G~~~~~~~~~~~~~~~~l~~ 76 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNG------AIFELGPRGIRPAGALGARTLLLVS 76 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTS------CEEESSCCCBCCCHHHHHHHHHHHH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCC------eEEEeCCCcccCCCcccHHHHHHHH
Confidence 799999999999999999999999 99999999999999999876422 39999999986531 234567999
Q ss_pred HhCCCeeeecC-------CcceEecCCcccCchhhHH-HH--------HHHHHHHHHHHHHHHHhhhhccCCCHHHHHHH
Q 004684 124 QLGSLLHKVRD-------KCPLYRLDGNSVDPEIDMK-VE--------ADFNRLLDKASRLRQLMGEVAMDVSLGSALET 187 (737)
Q Consensus 124 ~LGl~~~~~~~-------~~~~~~~~G~~~~~~~~~~-~~--------~~~~~ll~~~~~~~~~~~~~~~~~sl~~~l~~ 187 (737)
++|+....... ...+.+.+|.....+.... .. ..+...+. .+.. ......+.++.+++..
T Consensus 77 ~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~s~~~~~~~ 152 (477)
T 3nks_A 77 ELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLR---ELTK-PRGKEPDETVHSFAQR 152 (477)
T ss_dssp HTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CCTTSCSCSSHHHHT---TTTS-CCCCSSCCBHHHHHHH
T ss_pred HcCCcceeeecCCCCchhcceEEEECCEEEECCCChhhcccccchhhhHHHHHHHH---hhhc-CCCCCCCcCHHHHHHH
Confidence 99998443321 1123445555432221100 00 00000000 0000 0111345667666643
Q ss_pred HHHHhccCCCHHHHHHHHHHHHhhhhhchhhhhh----------------HHHHhhccCCC------------CCCCCCe
Q 004684 188 FWRVYWDSGNAEAMNLFNWHLANLEYANASLLSK----------------LSLAFWDQDDP------------YDMGGDH 239 (737)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------ls~~~~~~~~~------------~~~~g~~ 239 (737)
.++. .....++.+............++. +....+..... .......
T Consensus 153 ---~~g~---~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (477)
T 3nks_A 153 ---RLGP---EVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQ 226 (477)
T ss_dssp ---HHCH---HHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSE
T ss_pred ---hhCH---HHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccE
Confidence 1111 001111111111111111100000 00000000000 0012356
Q ss_pred eecCCCHHHHHHHHHH-----cCCcccCceEEEEEecCCc-EEEEECCeEEEecEEEEccChhhhhcCCcccCCCCCHHH
Q 004684 240 CFLPGGNGRLVQALVE-----NVPILYEKTVHTIRYGSDG-VQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRK 313 (737)
Q Consensus 240 ~~~~gG~~~Lv~aLa~-----gl~I~lnt~V~~I~~~~~~-V~V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~ 313 (737)
+++++|++.|+++|++ |++|++|++|++|+.++++ +.|++++++++||+||+|+|+..+.+ +.+.+++..
T Consensus 227 ~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~~~~~~----ll~~~~~~~ 302 (477)
T 3nks_A 227 WSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSE----LLPAEAAPL 302 (477)
T ss_dssp EEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCHHHHHH----HSCGGGHHH
T ss_pred EEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCHHHHHH----hccccCHHH
Confidence 8899999999999977 4589999999999998877 88877777899999999999999886 345566778
Q ss_pred HHHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEEeeccc------cCCCcEEEEEecchhhhhhc--
Q 004684 314 LDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYAT------VAGGPLLIALVAGEAAHKFE-- 385 (737)
Q Consensus 314 ~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~------p~g~~~L~~~v~g~~a~~~~-- 385 (737)
.+.+.++++.++.+|++.|++++|+. ..+|++.+.........+.++... +++..++++++.+..+..+.
T Consensus 303 ~~~l~~~~~~~~~~v~l~~~~~~~~~--~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~ 380 (477)
T 3nks_A 303 ARALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEAS 380 (477)
T ss_dssp HHHHHTCCEEEEEEEEEEETTCCCSS--CSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHS
T ss_pred HHHHhcCCCCcEEEEEEEECCCCCCC--CCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccc
Confidence 88999999999999999999999953 456877765433344444443221 33667889999877666553
Q ss_pred --CCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCCCC---cHHHHhcccCCCcEEEec
Q 004684 386 --SMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGD---DYDIMAESVGDGRLFFAG 460 (737)
Q Consensus 386 --~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~~---~~~~l~~pv~~~~L~fAG 460 (737)
.++++++++.++++|.++++.. +.|....+++|.. ++..+.+|.... ....+... .++|++||
T Consensus 381 ~~~~~~~~~~~~~~~~L~~~~g~~----~~~~~~~v~rw~~------a~p~~~~g~~~~~~~~~~~l~~~--~~~l~l~G 448 (477)
T 3nks_A 381 GCVLSQELFQQRAQEAAATQLGLK----EMPSHCLVHLHKN------CIPQYTLGHWQKLESARQFLTAH--RLPLTLAG 448 (477)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHCCC----SCCSEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHHT--TCSEEECS
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCC----CCCcEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhc--CCCEEEEc
Confidence 4689999999999999999752 5678888899965 454455554311 11123222 26899999
Q ss_pred cccccccCceeeHHHHHHHHHHHHHHH
Q 004684 461 EATIRRYPATMHGAFLSGLRETAKMAH 487 (737)
Q Consensus 461 d~ts~~~~g~~eGAi~SG~~AA~~Il~ 487 (737)
+|+.. .+|++|+.||++||++|+.
T Consensus 449 ~~~~G---~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 449 ASYEG---VAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TTTSC---CSHHHHHHHHHHHHHHHHH
T ss_pred cCCCC---CcHHHHHHHHHHHHHHHHh
Confidence 99853 4799999999999999986
No 18
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=3.9e-32 Score=309.18 Aligned_cols=417 Identities=18% Similarity=0.167 Sum_probs=205.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHHhCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGS 127 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LGl 127 (737)
++|||||||++||+||++|+++|++|+|||+++++||+++|++.+|+ .+|.|++++... ..+..+++.+|.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~-------~~D~G~~~~~~~--~~~~~l~~~~g~ 72 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGF-------TFDAGPTVITDP--SAIEELFALAGK 72 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTE-------EEECSCCCBSCT--HHHHHHHHTTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCE-------EEecCceeecCc--hhHHHHHHHhcc
Confidence 78999999999999999999999999999999999999999998876 999999998653 456678888875
Q ss_pred Ce------eeecCCcceEecCCcccCchhhHH-HHH-----------HHHHHHHHHHHHHHHhhhh------ccCCCHHH
Q 004684 128 LL------HKVRDKCPLYRLDGNSVDPEIDMK-VEA-----------DFNRLLDKASRLRQLMGEV------AMDVSLGS 183 (737)
Q Consensus 128 ~~------~~~~~~~~~~~~~G~~~~~~~~~~-~~~-----------~~~~ll~~~~~~~~~~~~~------~~~~sl~~ 183 (737)
.. .+......+.+.+|..+....+.. ... .+.++++.. +...... ....++.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 149 (501)
T 4dgk_A 73 QLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYS---RAVFKEGYLKLGTVPFLSFRD 149 (501)
T ss_dssp CGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHH---HHHTSSSCC--CCCCCCCHHH
T ss_pred hhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHH---HHhhhhhhhhccccccchhhh
Confidence 42 233334445667777655433221 111 111222211 1111110 01112222
Q ss_pred HHH------------HHHHHh-ccCCCHHHHHHHHHHHHhhhhhchhhhhhHHHHhhccCCCCCCCCCeeecCCCHHHHH
Q 004684 184 ALE------------TFWRVY-WDSGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLV 250 (737)
Q Consensus 184 ~l~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~Lv 250 (737)
.+. .+.... ....++..+.++.+...............+....+. ....+.++++||+++|+
T Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~~-----~~~~G~~~p~GG~~~l~ 224 (501)
T 4dgk_A 150 MLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHAL-----EREWGVWFPRGGTGALV 224 (501)
T ss_dssp HHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHHH-----HSCCCEEEETTHHHHHH
T ss_pred hhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhhh-----hccCCeEEeCCCCcchH
Confidence 211 111221 123344445554433222111110000011111111 12234678999999999
Q ss_pred HHHHH-----cCCcccCceEEEEEecCCcEE-EEE-CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCc
Q 004684 251 QALVE-----NVPILYEKTVHTIRYGSDGVQ-VLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYG 323 (737)
Q Consensus 251 ~aLa~-----gl~I~lnt~V~~I~~~~~~V~-V~~-~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~ 323 (737)
++|++ |++|++|++|++|..++++++ |++ +|+++.||.||+++++..+.+.++. ...++....+.++...++
T Consensus 225 ~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~ 303 (501)
T 4dgk_A 225 QGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS-QHPAAVKQSNKLQTKRMS 303 (501)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------------------------C
T ss_pred HHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcc-ccccchhhhhhhhccccC
Confidence 99976 568999999999999999987 566 8999999999999988776542322 123444555667777665
Q ss_pred -ceeEEEEEcCCccccCCCCCcceeecC------------CCCCc-ceEEEe-----eccccCCCcEEEEEecchhhhhh
Q 004684 324 -LLNKVAMLFPYVFWETDLDTFGHLTDD------------SSSRG-EFFLFY-----SYATVAGGPLLIALVAGEAAHKF 384 (737)
Q Consensus 324 -~~~kV~l~f~~~~w~~~~~~~g~l~~~------------~~~~~-~~~~~~-----~~~~p~g~~~L~~~v~g~~a~~~ 384 (737)
+..++++.++.+......... ++.++ ..... .+++.. +...|+|...+.+++..+. ..+
T Consensus 304 ~s~~~~~~~l~~~~~~l~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~-~~~ 381 (501)
T 4dgk_A 304 NSLFVLYFGLNHHHDQLAHHTV-CFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPH-LGT 381 (501)
T ss_dssp CEEEEEEEEESSCCTTSCSEEE-EEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECC-TTT
T ss_pred CceeEEEecccCCcccccccee-ccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCc-ccc
Confidence 577788888765421110000 00000 00011 111111 1224677777776664321 111
Q ss_pred cCC----ChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEe-------cCCCC-CCCCCcCCCCC--CCCCCCcHHHH-hc
Q 004684 385 ESM----PPTDAVTKVLQILKGIYEPKGINVPEPIQTVCT-------RWGGD-PFSLGSYSNVA--VGASGDDYDIM-AE 449 (737)
Q Consensus 385 ~~l----s~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~-------rW~~~-p~~~G~ys~~~--pG~~~~~~~~l-~~ 449 (737)
... ..+++.+++++.|.+.+.| ...+.++. .|... ....|++-... +.+....++.. .+
T Consensus 382 ~~~~~~~~~~~~~~~vl~~l~~~~~P------~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t 455 (501)
T 4dgk_A 382 ANLDWTVEGPKLRDRIFAYLEQHYMP------GLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDK 455 (501)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHTCT------THHHHEEEEEEECTTTTC------------------------------
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhCC------ChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCC
Confidence 122 2356777888888876632 21111121 12221 11122211111 11211223322 35
Q ss_pred ccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhhhh
Q 004684 450 SVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARAL 494 (737)
Q Consensus 450 pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~ 494 (737)
|+ +||||||++|.++ ++++||+.||+.||++|++.|.+.+-
T Consensus 456 ~i--~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 456 TI--TNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp CC--TTEEECCCH--------HHHHHHHHHHHHHHHHHHHC----
T ss_pred CC--CCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 67 8999999999764 68999999999999999999977654
No 19
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.4e-32 Score=305.99 Aligned_cols=397 Identities=14% Similarity=0.095 Sum_probs=247.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecC-CCCcHHHHHHHHhC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTG-TLGNPLGILAKQLG 126 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~-~~~~~l~~L~~~LG 126 (737)
+||+|||||++||+||++|+++|++|+|||+++++||++.++...|+ .+|.|++++.. ...+.+..+++++|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~-------~~d~G~~~~~~~~~~~~~~~l~~~lg 73 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGF-------QLSSGAFHMLPNGPGGPLACFLKEVE 73 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTE-------EEESSSCSCBTTGGGSHHHHHHHHTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCc-------EEcCCCceEecCCCccHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999988776 99999866542 33456888999999
Q ss_pred CCeeeecCCcceEecC-----------CcccCchhhHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhccC
Q 004684 127 SLLHKVRDKCPLYRLD-----------GNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDS 195 (737)
Q Consensus 127 l~~~~~~~~~~~~~~~-----------G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~~~ 195 (737)
+............... +..+..+....... +.........+.........+.++.+++... +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~---~--- 146 (425)
T 3ka7_A 74 ASVNIVRSEMTTVRVPLKKGNPDYVKGFKDISFNDFPSLLS-YKDRMKIALLIVSTRKNRPSGSSLQAWIKSQ---V--- 146 (425)
T ss_dssp CCCCEEECCCCEEEEESSTTCCSSTTCEEEEEGGGGGGGSC-HHHHHHHHHHHHHTTTSCCCSSBHHHHHHHH---C---
T ss_pred CCceEEecCCceEEeecCCCcccccccccceehhhhhhhCC-HHHHHHHHHHHHhhhhcCCCCCCHHHHHHHh---c---
Confidence 8765433222111111 22222111100000 0000011111111111223566777766432 1
Q ss_pred CCHHHHHHHHHHHHhhhhhchhhhhhH--HHHhhccCCCCCCCCCeeecCCCHHHHHHHHHH-----cCCcccCceEEEE
Q 004684 196 GNAEAMNLFNWHLANLEYANASLLSKL--SLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVE-----NVPILYEKTVHTI 268 (737)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~l~~l--s~~~~~~~~~~~~~g~~~~~~gG~~~Lv~aLa~-----gl~I~lnt~V~~I 268 (737)
..+....++..............++.. ...+... ...+..+++.+|++.|+++|++ |++|++|++|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~----~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i 222 (425)
T 3ka7_A 147 SDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM----YRFGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKI 222 (425)
T ss_dssp CCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHHCSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH----HhcCCccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEE
Confidence 233333333333222111111111110 0000000 0112457889999999999976 5689999999999
Q ss_pred EecCCcEE-EEECCeEEEecEEEEccChhhhhcCCcccCCCC--CHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcc
Q 004684 269 RYGSDGVQ-VLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPEL--PQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFG 345 (737)
Q Consensus 269 ~~~~~~V~-V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~L--p~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g 345 (737)
..+++++. |+++|++++||.||+|+|+..+.+ .+.-.+.+ |..+.+.++++.+++.++|++.|++++|.. .+
T Consensus 223 ~~~~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~----~~ 297 (425)
T 3ka7_A 223 LIENGKAAGIIADDRIHDADLVISNLGHAATAV-LCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH----TG 297 (425)
T ss_dssp EEETTEEEEEEETTEEEECSEEEECSCHHHHHH-HTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS----SS
T ss_pred EEECCEEEEEEECCEEEECCEEEECCCHHHHHH-hcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc----CE
Confidence 99988887 666889999999999999998876 22222333 788889999999999999999999987642 23
Q ss_pred eeecCCCCCcceEEE-e----eccccCCCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEe
Q 004684 346 HLTDDSSSRGEFFLF-Y----SYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCT 420 (737)
Q Consensus 346 ~l~~~~~~~~~~~~~-~----~~~~p~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~ 420 (737)
.+..... .....+. . +...|+|..++.+++.... + ..+. +++.++.++++|++++|.. .+....++
T Consensus 298 ~~~~~~~-~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~-~-~~~~-~~~~~~~~~~~l~~~~p~~-----~~~~~~v~ 368 (425)
T 3ka7_A 298 VLLTPYT-RRINGVNEVTQADPELAPPGKHLTMCHQYVAP-E-NVKN-LESEIEMGLEDLKEIFPGK-----RYEVLLIQ 368 (425)
T ss_dssp EEECCSS-SSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-G-GGGG-HHHHHHHHHHHHHHHSTTC-----CEEEEEEE
T ss_pred EEECCCh-hhcceEEeccCCCCCcCCCCCeEEEEEecccc-c-cccc-hHHHHHHHHHHHHHhCCCC-----ceEEEEEE
Confidence 3322221 1111122 1 2335678888777665321 1 1111 3466799999999999742 23334677
Q ss_pred cCCCCCCCCCcCCCCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHH
Q 004684 421 RWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMA 486 (737)
Q Consensus 421 rW~~~p~~~G~ys~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il 486 (737)
+|.. ++....+|.. .++...+|+ +|||+||||+.+.+..+|++|+.||++||++|+
T Consensus 369 ~~~~------~~P~~~~~~~--~~~~~~~p~--~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 369 SYHD------EWPVNRAASG--TDPGNETPF--SGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EEBT------TBCSBSSCTT--CCCCSBCSS--BTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred EECC------CccccccccC--CCCCCCCCc--CCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 8865 3333444422 233345566 799999999997656799999999999999886
No 20
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=8.6e-32 Score=306.83 Aligned_cols=408 Identities=14% Similarity=0.108 Sum_probs=247.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHC-CCcEEEEccCCCcceeeEeeec-CCCCCCccceEeccccceecCCCCcHHHHHHHH
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRKRAGGRVYTKKM-EGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~r~GGr~~S~~~-~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~ 124 (737)
++||||||||+|||+||++|+++ |++|+|||+++++||+++|... +|+ .+|.|+|+|...+. .+..++++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~-------~~D~G~h~~~~~~~-~v~~l~~e 81 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGF-------LYDVGGHVIFSHYK-YFDDCLDE 81 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSC-------EEESSCCCCCCCBH-HHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCE-------EEEeCceEecCCCH-HHHHHHHH
Confidence 48999999999999999999985 9999999999999999999754 444 99999999976654 46678888
Q ss_pred hCCCeeee--cCCcceEecCCcccCchhhHHH-----HHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhccCCC
Q 004684 125 LGSLLHKV--RDKCPLYRLDGNSVDPEIDMKV-----EADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGN 197 (737)
Q Consensus 125 LGl~~~~~--~~~~~~~~~~G~~~~~~~~~~~-----~~~~~~ll~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~~~~~ 197 (737)
++.....+ ......++.+|+.++.+....+ .........................++.+++... ++..+.
T Consensus 82 ~~~~~~~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~---~g~~l~ 158 (513)
T 4gde_A 82 ALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRM---MGTGIA 158 (513)
T ss_dssp HSCSGGGEEEEECCEEEEETTEEEESSGGGGGGGSCHHHHHHHHHHHHHHHHHHHTCCSCCCSHHHHHHHH---HHHHHH
T ss_pred hCCccceeEEecCceEEEECCeEeecchhhhhhhcchhhHHHHHHHHHHHHHhhhcccccccCHHHHHHHh---hhhhhh
Confidence 87653322 2334456677876654432111 0111111111111111122234556777765421 111100
Q ss_pred HHHHHHHHHHHHhhhhhchhhh---------------hhHHHHhhc-cCCCCCCCCC-eeecCCCHHHHHHHHHHcC---
Q 004684 198 AEAMNLFNWHLANLEYANASLL---------------SKLSLAFWD-QDDPYDMGGD-HCFLPGGNGRLVQALVENV--- 257 (737)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~l---------------~~ls~~~~~-~~~~~~~~g~-~~~~~gG~~~Lv~aLa~gl--- 257 (737)
..++.++...........+ ......... ....+..... .+.+++|++.|+++|++.+
T Consensus 159 ---~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~ 235 (513)
T 4gde_A 159 ---DLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKE 235 (513)
T ss_dssp ---HHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCGG
T ss_pred ---hhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHHhc
Confidence 0111111111111111100 001111111 1111111112 3345799999999998865
Q ss_pred --CcccCceEEEEEecCCcEEEEECCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCc
Q 004684 258 --PILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYV 335 (737)
Q Consensus 258 --~I~lnt~V~~I~~~~~~V~V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~ 335 (737)
+|++|++|++|..++++++ ..+|+++.||+||+|+|+..+.+ ..+ +.....+...++|.++..|.+.++..
T Consensus 236 g~~i~~~~~V~~I~~~~~~v~-~~~G~~~~ad~vI~t~P~~~l~~----~l~--~~~~~~~~~~l~y~~~~~v~l~~~~~ 308 (513)
T 4gde_A 236 KTRFGEKGKVTKVNANNKTVT-LQDGTTIGYKKLVSTMAVDFLAE----AMN--DQELVGLTKQLFYSSTHVIGVGVRGS 308 (513)
T ss_dssp GEEESGGGCEEEEETTTTEEE-ETTSCEEEEEEEEECSCHHHHHH----HTT--CHHHHHHHTTCCEEEEEEEEEEEESS
T ss_pred CeeeecceEEEEEEccCCEEE-EcCCCEEECCEEEECCCHHHHHH----hcC--chhhHhhhhcccCCceEEEEEEEecc
Confidence 5999999999998776543 22899999999999999999886 223 34566788899999999999988765
Q ss_pred cccCCCCCcceeecCCCC--------------------CcceE-EEeec----cccCCCcEEEEEecchhhhhhcCCChH
Q 004684 336 FWETDLDTFGHLTDDSSS--------------------RGEFF-LFYSY----ATVAGGPLLIALVAGEAAHKFESMPPT 390 (737)
Q Consensus 336 ~w~~~~~~~g~l~~~~~~--------------------~~~~~-~~~~~----~~p~g~~~L~~~v~g~~a~~~~~ls~e 390 (737)
.+....+..+....++.. ..... .+.+. ..+.+...+.+++.+.....+..++++
T Consensus 309 ~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de 388 (513)
T 4gde_A 309 RPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQE 388 (513)
T ss_dssp CCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTT
T ss_pred ccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHH
Confidence 332221111111111110 00011 11111 122333455666655555667789999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCCC---CcHHHHhcccCCCcEEEecccccccc
Q 004684 391 DAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASG---DDYDIMAESVGDGRLFFAGEATIRRY 467 (737)
Q Consensus 391 el~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~~---~~~~~l~~pv~~~~L~fAGd~ts~~~ 467 (737)
++++.++++|.++.+.. ..+.+....+.||.. +|.....|... ..++.+.. .|||+||....+.|
T Consensus 389 ~l~~~~~~~L~~~~~i~--~~~~i~~~~v~r~~~------ayP~y~~~~~~~~~~~~~~l~~----~~l~~~GR~g~~~Y 456 (513)
T 4gde_A 389 TILADCIQGLVNTEMLK--PTDEIVSTYHRRFDH------GYPTPTLEREGTLTQILPKLQD----KDIWSRGRFGSWRY 456 (513)
T ss_dssp THHHHHHHHHHHTTSSC--TTCEEEEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHH----TTEEECSTTTTCCG
T ss_pred HHHHHHHHHHHHhcCCC--CccceEEEEEEECCC------eecccCHhHHHHHHHHHHHHhh----cCcEEecCCcccCc
Confidence 99999999999998643 123456777888855 44444444321 12333433 58999998777666
Q ss_pred C-ceeeHHHHHHHHHHHHHHH
Q 004684 468 P-ATMHGAFLSGLRETAKMAH 487 (737)
Q Consensus 468 ~-g~~eGAi~SG~~AA~~Il~ 487 (737)
. ++|++|+.+|++||++|+.
T Consensus 457 ~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 457 EVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp GGCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHc
Confidence 4 6899999999999999996
No 21
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.97 E-value=6.4e-31 Score=284.63 Aligned_cols=325 Identities=17% Similarity=0.210 Sum_probs=228.9
Q ss_pred CcEEEECccHHHHHHHHHHHH---CCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCc--HHHHHH
Q 004684 48 LRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGN--PLGILA 122 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~--~l~~L~ 122 (737)
+||+|||||++||+||+.|++ .|++|+|||+++.+||++.+...... ....+|.|+.++...... .+..++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~----~~~~~d~g~~~~~~~~~~~~~~~~~~ 77 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHN----PQCTADLGAQYITCTPHYAKKHQRFY 77 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSC----TTCEEESSCCCEEECSSHHHHTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCC----CCceEecCCceEEcCchHHHHHHHHH
Confidence 689999999999999999999 99999999999999999998775432 124788888776433110 000000
Q ss_pred HHhCCCeeeecCCcceEecCCcccCchhhHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhccCCCHHHHH
Q 004684 123 KQLGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGNAEAMN 202 (737)
Q Consensus 123 ~~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~~~~~~~~~~ 202 (737)
+.+ ... .... .+.
T Consensus 78 ~~~-------------------------------------------~~~--g~~~-----------------~~~----- 90 (342)
T 3qj4_A 78 DEL-------------------------------------------LAY--GVLR-----------------PLS----- 90 (342)
T ss_dssp HHH-------------------------------------------HHT--TSCE-----------------ECC-----
T ss_pred HHH-------------------------------------------HhC--CCee-----------------cCc-----
Confidence 000 000 0000 000
Q ss_pred HHHHHHHhhhhhchhhhhhHHHHhhccCCCCCCCCCeeecCCCHHHHHHHHHH--cCCcccCceEEEEEecCCcEEEEE-
Q 004684 203 LFNWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVE--NVPILYEKTVHTIRYGSDGVQVLA- 279 (737)
Q Consensus 203 ~~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~Lv~aLa~--gl~I~lnt~V~~I~~~~~~V~V~~- 279 (737)
. .. .... .......+...+|++.++++|++ +++|+++++|++|+.++++|.|++
T Consensus 91 -------------~-~~--------~~~~-~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~ 147 (342)
T 3qj4_A 91 -------------S-PI--------EGMV-MKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQ 147 (342)
T ss_dssp -------------S-CE--------ETCC-C--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEES
T ss_pred -------------h-hh--------ccee-ccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEEC
Confidence 0 00 0000 00112356778999999999988 889999999999999999999988
Q ss_pred CCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEE
Q 004684 280 GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFL 359 (737)
Q Consensus 280 ~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~ 359 (737)
+|++++||.||+|+|++.+.+..-.+.|.||+...+.+++++|.++.+|++.|++++|.+. ...|.+..+. ....++
T Consensus 148 ~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~~~~--~~~~~~ 224 (342)
T 3qj4_A 148 TGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDV-PWAGQYITSN--PCIRFV 224 (342)
T ss_dssp SSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CC-SCSEEECSSC--SSEEEE
T ss_pred CCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECCCCccCC-ceeeEEccCC--cceEEE
Confidence 7777899999999999998863323445688888999999999999999999999988643 3456655432 112334
Q ss_pred EeeccccC-----CCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCC
Q 004684 360 FYSYATVA-----GGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSN 434 (737)
Q Consensus 360 ~~~~~~p~-----g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~ 434 (737)
+++...+. +...+++++.+..+..+.+++++++++.++++|.+++|. .+.|..+.++||...- -.|..
T Consensus 225 ~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~----~~~p~~~~v~rW~~a~---p~~~~ 297 (342)
T 3qj4_A 225 SIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPG----LPQPIATKCQKWRHSQ---VTNAA 297 (342)
T ss_dssp EEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSCS----CCCCSEEEEEEETTCS---BSSCC
T ss_pred EccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhccC----CCCCceeeeccccccc---ccccc
Confidence 44444332 345788888888888888899999999999999999973 4688999999996421 11111
Q ss_pred -CCCCCCCCcHHHHh-cccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHH
Q 004684 435 -VAVGASGDDYDIMA-ESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHC 488 (737)
Q Consensus 435 -~~pG~~~~~~~~l~-~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~ 488 (737)
..++. +. ... ++|++||||+.. +++|+|+.||.+||++|++.
T Consensus 298 ~~~~~~-------~~~~~~--~~l~laGd~~~g---~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 298 ANCPGQ-------MTLHHK--PFLACGGDGFTQ---SNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp SSSCSC-------EEEETT--TEEEECSGGGSC---SSHHHHHHHHHHHHHHHTTC
T ss_pred CCCcce-------eEecCC--ccEEEEccccCC---CCccHHHHHHHHHHHHHHhh
Confidence 01111 11 222 799999999964 69999999999999999764
No 22
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=1.7e-29 Score=281.31 Aligned_cols=386 Identities=17% Similarity=0.131 Sum_probs=232.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecC-CCCcHHHHHHHHhC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTG-TLGNPLGILAKQLG 126 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~-~~~~~l~~L~~~LG 126 (737)
+||+|||||++||+||++|+++|++|+|||+++++||++.+....|+ .+|.|++++.. .....+..+++++|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~-------~~d~G~~~~~~~~~~~~~~~l~~~lg 73 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGF-------QLSTGALHMIPHGEDGPLAHLLRILG 73 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTE-------EEESSSCSEETTTTSSHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCE-------EEecCCeEEEccCCChHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999998776 99999876543 33457888999999
Q ss_pred CCeeeec-CCcceEecCCcccCchhhHHHH--HHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhccCCCHHHHHH
Q 004684 127 SLLHKVR-DKCPLYRLDGNSVDPEIDMKVE--ADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGNAEAMNL 203 (737)
Q Consensus 127 l~~~~~~-~~~~~~~~~G~~~~~~~~~~~~--~~~~~ll~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~~~~~~~~~~~ 203 (737)
+...... .....++.+|..+..+...... .....+.......... .....+.++.+++.... ...+....+
T Consensus 74 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~l~~~g-----~~~~~~~~~ 147 (421)
T 3nrn_A 74 AKVEIVNSNPKGKILWEGKIFHYRESWKFLSVKEKAKALKLLAEIRMN-KLPKEEIPADEWIKEKI-----GENEFLLSV 147 (421)
T ss_dssp CCCCEEECSSSCEEEETTEEEEGGGGGGGCC--------CCHHHHHTT-CCCCCCSBHHHHHHHHT-----CCCHHHHHH
T ss_pred CcceEEECCCCeEEEECCEEEEcCCchhhCCHhHHHHHHHHHHHHHhc-cCCCCCCCHHHHHHHhc-----CCcHHHHHH
Confidence 8754332 1122333466654433221100 0000000000000000 00112355666554310 122222333
Q ss_pred HHHHHHhhhhhchhhhhh--HHHHhhccCCCCCCCCCeeecCCCHHHHHHHHHH-----cCCcccCceEEEEEecCCcEE
Q 004684 204 FNWHLANLEYANASLLSK--LSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVE-----NVPILYEKTVHTIRYGSDGVQ 276 (737)
Q Consensus 204 ~~~~~~~~~~~~~~~l~~--ls~~~~~~~~~~~~~g~~~~~~gG~~~Lv~aLa~-----gl~I~lnt~V~~I~~~~~~V~ 276 (737)
+..............++. +...+... ...+..+++.+|++.|+++|++ |++|++|++|++|..++++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v- 222 (421)
T 3nrn_A 148 LESFAGWADSVSLSDLTALELAKEIRAA----LRWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKV- 222 (421)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHHCSCEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-
T ss_pred HHHHHHHhcCCCcccCCHHHHHHHHHHH----hhcCCcceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-
Confidence 333222211111111111 00000000 0012457889999999999976 56899999999999988888
Q ss_pred EEECCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcc
Q 004684 277 VLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGE 356 (737)
Q Consensus 277 V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~ 356 (737)
|+++|++++||+||+|+|+..+.+ .+. .+.+|+...+.+.++.+.+..++++.++++.+.. .+.+...... ..
T Consensus 223 V~~~g~~~~ad~Vv~a~~~~~~~~-ll~-~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~----~~~~~~~~~~-~~ 295 (421)
T 3nrn_A 223 YTRDNEEYSFDVAISNVGVRETVK-LIG-RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG----NTIVFTPGLM-IN 295 (421)
T ss_dssp EETTCCEEECSEEEECSCHHHHHH-HHC-GGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC----SSEEECTTSS-SC
T ss_pred EEeCCcEEEeCEEEECCCHHHHHH-hcC-cccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC----CeEEEcCCcc-ee
Confidence 766888999999999999998875 221 1357888888999999999999999998874321 2222221111 11
Q ss_pred eEEEe----eccccCCCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcC
Q 004684 357 FFLFY----SYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSY 432 (737)
Q Consensus 357 ~~~~~----~~~~p~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~y 432 (737)
...+. +...|+|..++.++.... ..++++.++.++++|.+++| . .++ ..+++|.. .+
T Consensus 296 ~i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~~p-~----~~~--~~~~~~~~------~~ 356 (421)
T 3nrn_A 296 GFNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEKGWEELLEIFP-E----GEP--LLAQVYRD------GN 356 (421)
T ss_dssp EEECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHHHHHHHHHHCT-T----CEE--EEEEEC----------
T ss_pred eEeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHHHHHHHHHHcC-C----CeE--EEeeeccC------CC
Confidence 11111 223456766666655321 23345669999999999997 1 122 35567854 22
Q ss_pred CCC--CCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHH
Q 004684 433 SNV--AVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKM 485 (737)
Q Consensus 433 s~~--~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~I 485 (737)
... .++.. .+ .+ . +|||+|||++.+.+.-+||||+.||++||++|
T Consensus 357 p~~~~~~~~~---~~--~~--~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 357 PVNRTRAGLH---IE--WP--L-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp ---------C---CC--CC--C-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CcccccCCCC---CC--CC--C-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 211 12221 11 22 3 79999999998632225599999999999998
No 23
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.96 E-value=6e-29 Score=276.86 Aligned_cols=396 Identities=17% Similarity=0.183 Sum_probs=225.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHHh
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQL 125 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~L 125 (737)
++||+|||||++||+||++|+++| ++|+|||+++++|||++|.+..|. .+|.|++++...+ ..+..+++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~-------~~d~G~~~~~~~~-~~~~~l~~~~ 77 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGR-------RYEMGAIMGVPSY-DTIQEIMDRT 77 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTE-------ECCSSCCCBCTTC-HHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCc-------ccccCceeecCCc-HHHHHHHHHh
Confidence 489999999999999999999999 899999999999999999988765 8999999987654 4577899999
Q ss_pred CCCeeeecCCcceEecCCcccCchhhHHHHHHHHHHHHHHHHHHH-Hhhh-----------hccCCCHHHHHHHHHHHhc
Q 004684 126 GSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQ-LMGE-----------VAMDVSLGSALETFWRVYW 193 (737)
Q Consensus 126 Gl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~~~-----------~~~~~sl~~~l~~~~~~~~ 193 (737)
|++.........+++.+|.......+......+...+........ .... .....++.++++.. .
T Consensus 78 g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~---~- 153 (424)
T 2b9w_A 78 GDKVDGPKLRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLALN---G- 153 (424)
T ss_dssp CCCCCSCCCCEEEECTTSCEECGGGCTTHHHHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHHT---T-
T ss_pred CCccccccccceeEcCCCCEeccccCcccchhHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHhh---C-
Confidence 987654333334556667654322111100001111111111110 0000 01234555555421 0
Q ss_pred cCCCHHHHHHH-HHHHHhhhhhchhhhhhHHH-HhhccCC-CCCCCCCeeecCCCHHHHHHHHHHcC--CcccCceEEEE
Q 004684 194 DSGNAEAMNLF-NWHLANLEYANASLLSKLSL-AFWDQDD-PYDMGGDHCFLPGGNGRLVQALVENV--PILYEKTVHTI 268 (737)
Q Consensus 194 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ls~-~~~~~~~-~~~~~g~~~~~~gG~~~Lv~aLa~gl--~I~lnt~V~~I 268 (737)
... ....+ .+... ..+........+.. .+..... .....+..+.+.+|+++++++|.+.+ +|++|++|++|
T Consensus 154 --~~~-~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i 229 (424)
T 2b9w_A 154 --CEA-ARDLWINPFTA-FGYGHFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNATLEHPAERNVDITRI 229 (424)
T ss_dssp --CGG-GHHHHTTTTCC-CCCCCTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEE
T ss_pred --cHH-HHHHHHHHHHh-hccCChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHHHHHHHhhcceEEcCCEEEEE
Confidence 110 11111 00000 00001011111110 0000000 00011234578899999999999876 69999999999
Q ss_pred EecCCcEEEEECCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcceee
Q 004684 269 RYGSDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLT 348 (737)
Q Consensus 269 ~~~~~~V~V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~ 348 (737)
..++++|.|++++.+++||+||+|+|+..+.+ +.|.+|.. ++.+.++.+.++.. .+.+...++. ..+.+.
T Consensus 230 ~~~~~~v~v~~~~g~~~ad~Vv~a~~~~~~~~----~l~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~ 299 (424)
T 2b9w_A 230 TREDGKVHIHTTDWDRESDVLVLTVPLEKFLD----YSDADDDE-REYFSKIIHQQYMV-DACLVKEYPT----ISGYVP 299 (424)
T ss_dssp ECCTTCEEEEESSCEEEESEEEECSCHHHHTT----SBCCCHHH-HHHHTTCEEEEEEE-EEEEESSCCS----SEEECG
T ss_pred EEECCEEEEEECCCeEEcCEEEECCCHHHHhh----ccCCCHHH-HHHHhcCCcceeEE-EEEEeccCCc----cccccc
Confidence 99888898888444599999999999998754 44555544 34567776665332 2222222211 112222
Q ss_pred cCCC--CCcceEEEeeccccC-CCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCC
Q 004684 349 DDSS--SRGEFFLFYSYATVA-GGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGD 425 (737)
Q Consensus 349 ~~~~--~~~~~~~~~~~~~p~-g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~ 425 (737)
++.. ..+... +.....++ ...++++|+.+. ...+...+++++++.++++|.+ +++. .+.+ ....+|...
T Consensus 300 ~~~~~~~~g~~~-~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~v~~~l~~-l~~~---~~~~--~~~~~w~~~ 371 (424)
T 2b9w_A 300 DNMRPERLGHVM-VYYHRWADDPHQIITTYLLRN-HPDYADKTQEECRQMVLDDMET-FGHP---VEKI--IEEQTWYYF 371 (424)
T ss_dssp GGGSGGGTTSCC-EEEECCTTCTTSCEEEEEECC-BTTBCCCCHHHHHHHHHHHHHH-TTCC---EEEE--EEEEEEEEE
T ss_pred CCCCCcCCCcce-EEeeecCCCCceEEEEEeccC-CCcccccChHHHHHHHHHHHHH-cCCc---cccc--ccccceeee
Confidence 1110 111111 12222222 245778887754 3556678889999999999998 5421 1222 223456421
Q ss_pred CC-CCCcCCCCCCCCCCCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHH
Q 004684 426 PF-SLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMA 486 (737)
Q Consensus 426 p~-~~G~ys~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il 486 (737)
|. ....| ..| .+..+....+.++|||||+|+. .|++|+|+.||++||++|+
T Consensus 372 p~~~~~~~---~~G----~~~~~~~~~~~~~l~~aG~~~~---~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 372 PHVSSEDY---KAG----WYEKVEGMQGRRNTFYAGEIMS---FGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EECCHHHH---HTT----HHHHHHHTTTGGGEEECSGGGS---CSSHHHHHHHHHHHHHHHT
T ss_pred eccCHHHH---hcc----HHHHHHHHhCCCCceEeccccc---cccHHHHHHHHHHHHHHhc
Confidence 11 00000 011 1222333223379999999986 4799999999999999885
No 24
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.96 E-value=9e-28 Score=272.38 Aligned_cols=409 Identities=14% Similarity=0.100 Sum_probs=251.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEccCCCcceeeEee-ecCCCCCCccceEeccccceecCCCCcHHHHHHHH
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKRAGGRVYTK-KMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r~GGr~~S~-~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~ 124 (737)
.+||+|||||++||+||++|+++| .+|+|||+++++||+++|. ..+|. .+|.|++++...+ ..+..++++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~-------~~~~g~~~~~~~~-~~~~~l~~~ 80 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGF-------TWDLGGHVIFSHY-QYFDDVMDW 80 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSC-------EEESSCCCBCCSB-HHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCc-------EEeeCCcccccCh-HHHHHHHHH
Confidence 489999999999999999999999 7999999999999999996 44554 9999999987643 446668888
Q ss_pred hCCCeeeecCCcceEecCCcccCchhhHH-----H---HHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHH-HHH-hcc
Q 004684 125 LGSLLHKVRDKCPLYRLDGNSVDPEIDMK-----V---EADFNRLLDKASRLRQLMGEVAMDVSLGSALETF-WRV-YWD 194 (737)
Q Consensus 125 LGl~~~~~~~~~~~~~~~G~~~~~~~~~~-----~---~~~~~~ll~~~~~~~~~~~~~~~~~sl~~~l~~~-~~~-~~~ 194 (737)
++..... .....+++.+|+.+..+.... . ...+..++.. . ......++.++++|+... ... +..
T Consensus 81 ~~~~~~~-~~~~~~~~~~g~~~~~P~~~~~~~l~~~~~~~~~~~ll~~----~-~~~~~~~~~s~~e~~~~~~g~~~~~~ 154 (484)
T 4dsg_A 81 AVQGWNV-LQRESWVWVRGRWVPYPFQNNIHRLPEQDRKRCLDELVRS----H-ARTYTEPPNNFEESFTRQFGEGIADI 154 (484)
T ss_dssp HCSCEEE-EECCCEEEETTEEEESSGGGCGGGSCHHHHHHHHHHHHHH----H-HCCCSSCCSSHHHHHHHHHHHHHCCC
T ss_pred Hhhhhhh-ccCceEEEECCEEEEeCccchhhhCCHHHHHHHHHHHHHH----H-hccCCCCCCCHHHHHHHHhHHHHHHH
Confidence 7532222 233345556777655442110 0 0111111111 0 111234677888887542 111 111
Q ss_pred CCCHHHHHHHHHHHHhhhhh------chhhhhhHHHHhhccCC--CCCCCCCeeec-CCCHHHHHHHHHHcC---CcccC
Q 004684 195 SGNAEAMNLFNWHLANLEYA------NASLLSKLSLAFWDQDD--PYDMGGDHCFL-PGGNGRLVQALVENV---PILYE 262 (737)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~------~~~~l~~ls~~~~~~~~--~~~~~g~~~~~-~gG~~~Lv~aLa~gl---~I~ln 262 (737)
.+.+.....+......+... ....+..+....+.... .+...+.+.++ .||+++|+++|++.+ +|+++
T Consensus 155 ~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~~~i~~~ 234 (484)
T 4dsg_A 155 FMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPSEKLTFN 234 (484)
T ss_dssp CCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCGGGEEEC
T ss_pred HHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhhCeEEEC
Confidence 11111111111000000000 00001111111111111 11112223344 589999999999988 69999
Q ss_pred --ceEEEEEecCCcEEEEECCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCC
Q 004684 263 --KTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETD 340 (737)
Q Consensus 263 --t~V~~I~~~~~~V~V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~ 340 (737)
++|++|..++++|.+ .+|+++.||+||+|+|+..+.+......+.+|+...++++.++|.++.+|.+.|+.+....-
T Consensus 235 ~~~~V~~I~~~~~~v~~-~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~ 313 (484)
T 4dsg_A 235 SGFQAIAIDADAKTITF-SNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHL 313 (484)
T ss_dssp GGGCEEEEETTTTEEEE-TTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGG
T ss_pred CCceeEEEEecCCEEEE-CCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccC
Confidence 569999998886643 37889999999999999998862211124578888899999999999999999988632211
Q ss_pred CCCcceeecCCCCCcceEEEee----ccccCCCcEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCc-
Q 004684 341 LDTFGHLTDDSSSRGEFFLFYS----YATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPI- 415 (737)
Q Consensus 341 ~~~~g~l~~~~~~~~~~~~~~~----~~~p~g~~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~- 415 (737)
...++.+.++.........+++ +..|++..+++..+... ....++++++++.++++|.++.+.. ..+++
T Consensus 314 ~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l~~~a~~~L~~~~~~~---~~~~~~ 387 (484)
T 4dsg_A 314 KTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTLIEDCIVGCLASNLLL---PEDLLV 387 (484)
T ss_dssp TTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSHHHHHHHHHHHTTSCC---TTCCEE
T ss_pred CCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHHHHHHHHHHHHcCCCC---ccceEE
Confidence 3456666655433222222222 23456666666666433 3456799999999999999986421 11333
Q ss_pred eEEEecCCCCCCCCCcCCCCCCCCCC---CcHHHHhcccCCCcEEEeccccccccC-ceeeHHHHHHHHHHHHHH
Q 004684 416 QTVCTRWGGDPFSLGSYSNVAVGASG---DDYDIMAESVGDGRLFFAGEATIRRYP-ATMHGAFLSGLRETAKMA 486 (737)
Q Consensus 416 ~~~~~rW~~~p~~~G~ys~~~pG~~~---~~~~~l~~pv~~~~L~fAGd~ts~~~~-g~~eGAi~SG~~AA~~Il 486 (737)
...+.+|.. +|....+|... ..+..+.+ .||+++|.+..+.|. ..|+.|+.||++||++|+
T Consensus 388 ~~~v~r~~~------~yP~y~~~~~~~~~~~~~~l~~----~~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 388 SKWHYRIEK------GYPTPFIGRNNLLEKAQPELMS----RCIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp EEEEEEEEE------EEECCBTTHHHHHHHHHHHHHH----TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCc------cccCCCccHHHHHHHHHHHHHh----CCcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 346778854 66655565431 12223332 389999998776442 479999999999999997
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.94 E-value=2.1e-25 Score=239.77 Aligned_cols=322 Identities=14% Similarity=0.209 Sum_probs=221.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecCCCCcHHHHHHHHhCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGS 127 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~LGl 127 (737)
+||+|||||++||++|+.|+++|++|+|||+++.+||++.+....+. .+|.|..++..... .+..+++++..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~ 74 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAG-------ALDMGAQYFTARDR-RFATAVKQWQA 74 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTE-------EEECSCCCBCCCSH-HHHHHHHHHHH
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCC-------eEecCCCeEecCCH-HHHHHHHHHHh
Confidence 79999999999999999999999999999999999999998877665 88888887764431 12222222111
Q ss_pred Ce-eeecCCcceEecCCcccCchhhHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhccCCCHHHHHHHHH
Q 004684 128 LL-HKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGNAEAMNLFNW 206 (737)
Q Consensus 128 ~~-~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 206 (737)
.. ...........
T Consensus 75 ~~~~~~~~~~~~~~------------------------------------------------------------------ 88 (336)
T 1yvv_A 75 QGHVAEWTPLLYNF------------------------------------------------------------------ 88 (336)
T ss_dssp HTSEEEECCCEEEE------------------------------------------------------------------
T ss_pred CCCeeeccccceec------------------------------------------------------------------
Confidence 00 00000000000
Q ss_pred HHHhhhhhchhhhhhHHHHhhccCCCCCCCCCeeecCCCHHHHHHHHHHcCCcccCceEEEEEecCCcEEEEE-CCeEE-
Q 004684 207 HLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLA-GSQVF- 284 (737)
Q Consensus 207 ~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~Lv~aLa~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i- 284 (737)
... ...........+....|++.+.++|+++++|+++++|++|+.++++|.|++ +|+.+
T Consensus 89 --------~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ 149 (336)
T 1yvv_A 89 --------HAG-----------RLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHG 149 (336)
T ss_dssp --------SSS-----------BCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEE
T ss_pred --------cCc-----------ccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCcc
Confidence 000 000001112345566799999999999999999999999999999999988 67666
Q ss_pred EecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEEeecc
Q 004684 285 EGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYA 364 (737)
Q Consensus 285 ~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~ 364 (737)
+||.||+|+|...+.+ +.+. .+.....+..+.|.+..++++.|++++|... . +.... .++..+++...
T Consensus 150 ~a~~vV~a~g~~~~~~----~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~----~~~~~~l~~~~ 217 (336)
T 1yvv_A 150 PFSHVIIATPAPQAST----LLAA-APKLASVVAGVKMDPTWAVALAFETPLQTPM-Q--GCFVQ----DSPLDWLARNR 217 (336)
T ss_dssp EESEEEECSCHHHHGG----GGTT-CHHHHHHHTTCCEEEEEEEEEEESSCCSCCC-C--EEEEC----SSSEEEEEEGG
T ss_pred ccCEEEEcCCHHHHHH----hhcc-CHHHHHHHhhcCccceeEEEEEecCCCCCCC-C--eEEeC----CCceeEEEecC
Confidence 4999999999998876 2222 2355678899999999999999999987532 2 22222 12333333333
Q ss_pred -ccCCC---cEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCCcCCCCCCCCC
Q 004684 365 -TVAGG---PLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGAS 440 (737)
Q Consensus 365 -~p~g~---~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~~~~rW~~~p~~~G~ys~~~pG~~ 440 (737)
.|... ..++.+..++.+..+..++++++.+.+++.+.++++. ..+.|.....++|... ...|. .+..
T Consensus 218 ~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~---~~~~p~~~~~~rw~~a---~~~~~---~~~~ 288 (336)
T 1yvv_A 218 SKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDC---TMPAPVFSLAHRWLYA---RPAGA---HEWG 288 (336)
T ss_dssp GSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSS---CCCCCSEEEEEEEEEE---EESSC---CCCS
T ss_pred cCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCC---CCCCCcEEEccccCcc---CCCCC---CCCC
Confidence 33221 3566666667777888899999999999999999974 2556777788899531 11111 1111
Q ss_pred CCcHHHHhcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhhh
Q 004684 441 GDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARA 493 (737)
Q Consensus 441 ~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~ 493 (737)
.+..+. +||+||||+++. ++|++|+.||.++|+.|++.+....
T Consensus 289 -----~~~~~~--~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~~~~~ 331 (336)
T 1yvv_A 289 -----ALSDAD--LGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp -----CEEETT--TTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred -----eeecCC--CCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 011222 899999999974 6999999999999999999875443
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.88 E-value=1.4e-23 Score=232.26 Aligned_cols=251 Identities=16% Similarity=0.181 Sum_probs=149.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHC-CCcEEEEccCCCcceeeEeeec--CCCCCCccceEe-ccccceecCCCCcHHHHHH
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRKRAGGRVYTKKM--EGGAGNRISASA-DLGGSVLTGTLGNPLGILA 122 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~r~GGr~~S~~~--~g~~g~~~~~~~-D~G~~~~~~~~~~~l~~L~ 122 (737)
++||+|||||++||+||++|+++ |++|+|||+++++||+++|... .|. .+ +.|+++++..+ ..+..++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~-------~~~~~G~~~~~~~~-~~~~~~~ 78 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGI-------EVHKYGAHLFHTSN-KRVWDYV 78 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCC-------EEETTSCCCEEESC-HHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCE-------EEEeCCCcEEcCCc-HHHHHHH
Confidence 48999999999999999999999 9999999999999999999987 343 66 59999998654 4566788
Q ss_pred HHhCCCeeeecCCcceEecCCcccCchhhHH-HHHHHHHH--HHHHH-HHHHHhhhh--ccCCCHHHHHHHHHHHhccCC
Q 004684 123 KQLGSLLHKVRDKCPLYRLDGNSVDPEIDMK-VEADFNRL--LDKAS-RLRQLMGEV--AMDVSLGSALETFWRVYWDSG 196 (737)
Q Consensus 123 ~~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~l--l~~~~-~~~~~~~~~--~~~~sl~~~l~~~~~~~~~~~ 196 (737)
+++|+. ... .....++.+|+.+..+.... +...+... ..... .+....... ..+.++.+++.. .++.
T Consensus 79 ~~~g~~-~~~-~~~~~~~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~e~l~~---~~g~-- 151 (399)
T 1v0j_A 79 RQFTDF-TDY-RHRVFAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAIS---LIGR-- 151 (399)
T ss_dssp TTTCCB-CCC-CCCEEEEETTEEEEESSSHHHHHHHHTSCCCHHHHHHHHHHHGGGSCTTC----CCHHHH---HHCH--
T ss_pred HHhhhh-hcc-ccceEEEECCEEEeCCCCHHHHHHHhcccCCHHHHHHHHHHHhhccCCCCcccHHHHHHH---HHhH--
Confidence 999872 222 23345567887665554321 11111100 01111 111111111 234556565542 1221
Q ss_pred CHHHHHHHHHHHHhhhhhchhhhhhHHHHhhccCCCCC---CCCCe-eecCCCHHHHHHHHHHc--CCcccCceEEEEEe
Q 004684 197 NAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYD---MGGDH-CFLPGGNGRLVQALVEN--VPILYEKTVHTIRY 270 (737)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~---~~g~~-~~~~gG~~~Lv~aLa~g--l~I~lnt~V~~I~~ 270 (737)
.....++.++...........++......+....... ....+ .+++||+++|+++|++. .+|++|++|++|..
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~ 230 (399)
T 1v0j_A 152 -PLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRG 230 (399)
T ss_dssp -HHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCSTTEEEECSCCHHHHHH
T ss_pred -HHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhcCCeEEEECCchhhhhh
Confidence 1112223333222222222222211110000000000 11123 28899999999999874 46999999999964
Q ss_pred cCCcEEEEECCeEE-EecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCcc
Q 004684 271 GSDGVQVLAGSQVF-EGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVF 336 (737)
Q Consensus 271 ~~~~V~V~~~G~~i-~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~ 336 (737)
. | + ++ +||+||+|+|+..+.+. .+..++|.++..+.+.++.+.
T Consensus 231 ~---v----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 231 Q---L----R--PGSPAAPVVYTGPLDRYFDY--------------AEGRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp H---H----T--TTSTTCCEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSC
T ss_pred h---h----h--hcccCCEEEECCcHHHHHhh--------------hhCCCCcceEEEEEEEEcccc
Confidence 2 2 1 34 69999999999988741 234678888888888887653
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.84 E-value=2e-20 Score=204.59 Aligned_cols=250 Identities=15% Similarity=0.151 Sum_probs=153.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEe-ccccceecCCCCcHHHHHHHHhC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASA-DLGGSVLTGTLGNPLGILAKQLG 126 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~-D~G~~~~~~~~~~~l~~L~~~LG 126 (737)
+||+|||||++||+||++|+++|++|+|+|+++++||++.|....|. .+ +.|++++...+. .+..+++++|
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~-------~~~~~G~~~~~~~~~-~~~~~~~~l~ 73 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGI-------QIHKYGAHIFHTNDK-YIWDYVNDLV 73 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTE-------EEETTSCCCEEESCH-HHHHHHHTTS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCc-------eeeccCCceecCCCH-HHHHHHHHhh
Confidence 79999999999999999999999999999999999999999887654 77 599999987643 4566888888
Q ss_pred CCeeeecCCcceEecCCcccCchhhHH-HHHHHHH-HHHHHHHH-HHHhhh--hccCCCHHHHHHHHHHHhccCCCHHHH
Q 004684 127 SLLHKVRDKCPLYRLDGNSVDPEIDMK-VEADFNR-LLDKASRL-RQLMGE--VAMDVSLGSALETFWRVYWDSGNAEAM 201 (737)
Q Consensus 127 l~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~-ll~~~~~~-~~~~~~--~~~~~sl~~~l~~~~~~~~~~~~~~~~ 201 (737)
.... . ........+|..++.+.... +...+.. .......+ ...... ...+.++++++... ++.. ...
T Consensus 74 ~~~~-~-~~~~~~~~~g~~~~~p~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~---~g~~---~~~ 145 (367)
T 1i8t_A 74 EFNR-F-TNSPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISL---VGED---LYQ 145 (367)
T ss_dssp CBCC-C-CCCCEEEETTEEEESSBSHHHHHHHHCCCCHHHHHHHHHHHTTTTCCCCCCSHHHHHHHH---HHHH---HHH
T ss_pred hhhh-c-cccceEEECCeEEEcCCCHHHHHHHhccCCHHHHHHHHHHHhhccCCCCCccHHHHHHHH---HhHH---HHH
Confidence 6322 1 22234556777655543321 1111110 00111111 111111 13567788776432 1111 111
Q ss_pred HHHHHHHHhhhhhchhhhhhHHHH-hhcc--CCCCCCCCCee-ecCCCHHHHHHHHHHcCCcccCceEEEEEecCCcEEE
Q 004684 202 NLFNWHLANLEYANASLLSKLSLA-FWDQ--DDPYDMGGDHC-FLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQV 277 (737)
Q Consensus 202 ~~~~~~~~~~~~~~~~~l~~ls~~-~~~~--~~~~~~~g~~~-~~~gG~~~Lv~aLa~gl~I~lnt~V~~I~~~~~~V~V 277 (737)
.++.++...........++..... +... .......+.+. +++||+++|+++|+++++|++|++|++|.. .|
T Consensus 146 ~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~g~~i~l~~~V~~i~~---~v-- 220 (367)
T 1i8t_A 146 ALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEGVDVKLGIDFLKDKD---SL-- 220 (367)
T ss_dssp HHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHTTSEEECSCCGGGSHH---HH--
T ss_pred HHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhcCCEEEeCCceeeech---hh--
Confidence 223333332222222222211110 0000 00000122332 889999999999999999999999998862 12
Q ss_pred EECCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccc
Q 004684 278 LAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFW 337 (737)
Q Consensus 278 ~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w 337 (737)
.+.+|+||+|+|+..+... .+..++|.++..+.+.++.+.+
T Consensus 221 -----~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 221 -----ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp -----HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred -----hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEEEeccccC
Confidence 2468999999999987631 1346788888899998887643
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.83 E-value=1.4e-20 Score=207.02 Aligned_cols=243 Identities=16% Similarity=0.199 Sum_probs=148.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeec--CCCCCCccceEe-ccccceecCCCCcHHHHHHH
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKM--EGGAGNRISASA-DLGGSVLTGTLGNPLGILAK 123 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~--~g~~g~~~~~~~-D~G~~~~~~~~~~~l~~L~~ 123 (737)
++||+|||||++||+||+.|+++|++|+|+|+++++||+++|... .|. .+ |.|+|++...+ ..+..+++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~-------~~~~~G~~~~~~~~-~~~~~~~~ 74 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNV-------MVHVYGPHIFHTDN-ETVWNYVN 74 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCC-------EEETTSCCCEEESC-HHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCc-------eEeeCCceEECCCC-HHHHHHHH
Confidence 389999999999999999999999999999999999999999887 443 54 99999998754 45667889
Q ss_pred HhCCCeeeecCCcceEecCCcccCchhhHH-HHHHHHHH--HHHHHH-HHHHhhh-hccCCCHHHHHHHHHHHhccCCCH
Q 004684 124 QLGSLLHKVRDKCPLYRLDGNSVDPEIDMK-VEADFNRL--LDKASR-LRQLMGE-VAMDVSLGSALETFWRVYWDSGNA 198 (737)
Q Consensus 124 ~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~l--l~~~~~-~~~~~~~-~~~~~sl~~~l~~~~~~~~~~~~~ 198 (737)
++|.. ... ........+|..+..+.... +...+... .....+ +...... ...+.++++++... ++. .
T Consensus 75 ~l~~~-~~~-~~~~~~~~~g~~~~~P~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~sl~e~~~~~---~g~---~ 146 (384)
T 2bi7_A 75 KHAEM-MPY-VNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEARALIAEKGDSTIADPQTFEEEALRF---IGK---E 146 (384)
T ss_dssp TTSCE-EEC-CCCEEEEETTEEEEESCCHHHHHHHTTCCCCHHHHHHHHHHHSCCSCSSCCBHHHHHHHH---HCH---H
T ss_pred HHhhh-ccc-ccceEEEECCEEEECCCChhHHHHHhcccCCHHHHHHHHHHhhhccCCCCcCHHHHHHHh---hcH---H
Confidence 99862 222 22334556776554443321 11111100 011111 1111111 13466777776432 211 1
Q ss_pred HHHHHHHHHHHhhhhhchhhhhhHHHH-hh--ccCCCCCCCCCee-ecCCCHHHHHHHHHH--cCCcccCceEE-EEEec
Q 004684 199 EAMNLFNWHLANLEYANASLLSKLSLA-FW--DQDDPYDMGGDHC-FLPGGNGRLVQALVE--NVPILYEKTVH-TIRYG 271 (737)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~l~~ls~~-~~--~~~~~~~~~g~~~-~~~gG~~~Lv~aLa~--gl~I~lnt~V~-~I~~~ 271 (737)
....++.++...........++..... +. .........+.+. +++||+++++++|++ +++|++|++|+ +|..
T Consensus 147 ~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~- 225 (384)
T 2bi7_A 147 LYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHENIKVDLQREFIVEERT- 225 (384)
T ss_dssp HHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG-
T ss_pred HHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhcCCCEEEECCeeehhhhc-
Confidence 111223333333222222222211110 00 0001011123343 889999999999997 45799999999 8853
Q ss_pred CCcEEEEECCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcC
Q 004684 272 SDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFP 333 (737)
Q Consensus 272 ~~~V~V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~ 333 (737)
.+|+||+|+|+..+.+. .+..++|.+...+.+.++
T Consensus 226 -------------~~d~VI~a~p~~~~~~~--------------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 226 -------------HYDHVFYSGPLDAFYGY--------------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp -------------GSSEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEEE
T ss_pred -------------cCCEEEEcCCHHHHHHh--------------hcCCCCcceEEEEEEEeC
Confidence 28999999999988741 134578888888888876
No 29
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.81 E-value=2.3e-18 Score=193.47 Aligned_cols=242 Identities=12% Similarity=0.128 Sum_probs=138.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCC-C---C-------------CCccceEeccccc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEG-G---A-------------GNRISASADLGGS 108 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g-~---~-------------g~~~~~~~D~G~~ 108 (737)
..+||||||||++||+||+.|+++|++|+|||+++++||+++|++.+| + + +.+..+.+++|+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~ 89 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPK 89 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccccc
Confidence 348999999999999999999999999999999999999999987654 1 0 0111122333333
Q ss_pred eecCCCCcHHHHHHHHhCCCee-e-ecCCcceEecCCcccCchhh-HH-H---------HHHHHHHHHHHHHHHHHh---
Q 004684 109 VLTGTLGNPLGILAKQLGSLLH-K-VRDKCPLYRLDGNSVDPEID-MK-V---------EADFNRLLDKASRLRQLM--- 172 (737)
Q Consensus 109 ~~~~~~~~~l~~L~~~LGl~~~-~-~~~~~~~~~~~G~~~~~~~~-~~-~---------~~~~~~ll~~~~~~~~~~--- 172 (737)
++.. ...+..+++++|+... . ......+.+.+|+.+..+.+ .. . ...+.+++..+..+....
T Consensus 90 ~l~~--~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (453)
T 2bcg_G 90 FLMA--NGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLST 167 (453)
T ss_dssp BEET--TSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGG
T ss_pred eeec--CcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCchh
Confidence 3322 3467789999998532 1 11122344457765543322 11 0 111222222221110000
Q ss_pred -hh-hccCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHhh---hhhchhhhhhH-H-HHhhccCCCCCCCCCeeecCCC
Q 004684 173 -GE-VAMDVSLGSALETFWRVYWDSGNAEAMNLFNWHLANL---EYANASLLSKL-S-LAFWDQDDPYDMGGDHCFLPGG 245 (737)
Q Consensus 173 -~~-~~~~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l-s-~~~~~~~~~~~~~g~~~~~~gG 245 (737)
.. .....++.++++. ...++..+.++...+... .+........+ . ..+......+ ..+.+.++.||
T Consensus 168 ~~~~~~~~~s~~~~l~~------~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~-~~~~~~~p~gG 240 (453)
T 2bcg_G 168 HQGLDLDKNTMDEVYYK------FGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYG 240 (453)
T ss_dssp STTCCTTTSBHHHHHHH------TTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTC
T ss_pred hhccccccCCHHHHHHH------hCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhh-cCCceEeeCCC
Confidence 00 0124455554432 234566666554332210 01100001111 0 0010000001 12346689999
Q ss_pred HHHHHHHHHH-----cCCcccCceEEEEEec--CCcEE-EEECCeEEEecEEEEccChh
Q 004684 246 NGRLVQALVE-----NVPILYEKTVHTIRYG--SDGVQ-VLAGSQVFEGDMVLCTVPLG 296 (737)
Q Consensus 246 ~~~Lv~aLa~-----gl~I~lnt~V~~I~~~--~~~V~-V~~~G~~i~AD~VI~AvP~~ 296 (737)
++.|+++|++ |.+|+++++|++|..+ ++++. |.++|++++||+||+|+++.
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYF 299 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGC
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCcc
Confidence 9999999975 5679999999999988 66654 55588999999999999875
No 30
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.80 E-value=4.1e-19 Score=195.13 Aligned_cols=248 Identities=15% Similarity=0.142 Sum_probs=155.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeee-cCCCCCCccceEeccccceecCCCCcHHHHHHHH
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKK-MEGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~-~~g~~g~~~~~~~D~G~~~~~~~~~~~l~~L~~~ 124 (737)
..+||+|||||++||+||++|+++|++|+|+|+++++||++++.. ..|. ..+|.|+|++.... ..+..++++
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~------~~~~~G~~~~~~~~-~~~~~~~~~ 100 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGV------LIHPYGPHIFHTNS-KDVFEYLSR 100 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSC------EECTTSCCCCEESC-HHHHHHHHT
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCc------eEeecCCcccCCCh-HHHHHHHHH
Confidence 458999999999999999999999999999999999999999987 4443 23599999998654 456778899
Q ss_pred hCCCeeeecCCcceEecCCcccCchhhHHH-HHHHHHHH--HHHHHHHH-HhhhhccCCCHHHHHHHHHHHhccCCCHHH
Q 004684 125 LGSLLHKVRDKCPLYRLDGNSVDPEIDMKV-EADFNRLL--DKASRLRQ-LMGEVAMDVSLGSALETFWRVYWDSGNAEA 200 (737)
Q Consensus 125 LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~ll--~~~~~~~~-~~~~~~~~~sl~~~l~~~~~~~~~~~~~~~ 200 (737)
+|... ........+.+|+.++.+..... ...+...+ .....+.. ......++.++++|+.. .++..+ .
T Consensus 101 ~~~~~--~~~~~~~~~~~g~l~~lP~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~s~~e~~~~---~~G~~~---~ 172 (397)
T 3hdq_A 101 FTEWR--PYQHRVLASVDGQLLPIPINLDTVNRLYGLNLTSFQVEEFFASVAEKVEQVRTSEDVVVS---KVGRDL---Y 172 (397)
T ss_dssp SCCEE--ECCCBEEEEETTEEEEESCCHHHHHHHHTCCCCHHHHHHHHHHHCCCCSSCCBHHHHHHH---HHHHHH---H
T ss_pred hhhcc--cccccceEEECCEEEEcCCChHHHHHhhccCCCHHHHHHHHhhcccCCCCCcCHHHHHHH---hcCHHH---H
Confidence 98532 22334556678888776654321 11111000 01111111 11122456788887643 222211 1
Q ss_pred HHHHHHHHHhhhhhchhhhhhHHHHhhccC------CCCCCCCCe-eecCCCHHHHHHHHHH--cCCcccCceEEEEEec
Q 004684 201 MNLFNWHLANLEYANASLLSKLSLAFWDQD------DPYDMGGDH-CFLPGGNGRLVQALVE--NVPILYEKTVHTIRYG 271 (737)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~l~~ls~~~~~~~------~~~~~~g~~-~~~~gG~~~Lv~aLa~--gl~I~lnt~V~~I~~~ 271 (737)
..++.++.........+.+ ++.++... +.......+ .++.+|+++|+++|++ +++|++|++|+++
T Consensus 173 e~~~~py~~k~~~~~~~~L---sa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~--- 246 (397)
T 3hdq_A 173 NKFFRGYTRKQWGLDPSEL---DASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSPNIKVMLNTDYREI--- 246 (397)
T ss_dssp HHHTHHHHHHHHSSCGGGS---BTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCSTTEEEEESCCGGGT---
T ss_pred HHHHHHHhCchhCCCHHHH---HHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhccCCEEEECCeEEec---
Confidence 1223333333322222222 22221111 001111222 3689999999999987 6789999999843
Q ss_pred CCcEEEEECCeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccc
Q 004684 272 SDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFW 337 (737)
Q Consensus 272 ~~~V~V~~~G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w 337 (737)
+.++.+|+||+|+|+..+.. . .+..++|.++..+.+.++...+
T Consensus 247 ---------~~~~~~d~vI~T~P~d~~~~----~----------~~g~L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 247 ---------ADFIPFQHMIYTGPVDAFFD----F----------CYGKLPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp ---------TTTSCEEEEEECSCHHHHTT----T----------TTCCCCEEEEEEEEEEESSSCS
T ss_pred ---------cccccCCEEEEcCCHHHHHH----H----------hcCCCCCceEEEEEEEeccccC
Confidence 33457999999999988752 1 2346788899999999886543
No 31
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.77 E-value=8.5e-17 Score=163.79 Aligned_cols=59 Identities=32% Similarity=0.675 Sum_probs=54.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCCCCCCccceEeccccceecC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTG 112 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g~~g~~~~~~~D~G~~~~~~ 112 (737)
++||+|||||+|||+||+.|+++|++|+||||++++||++.+.+..+. .+|+|+.++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~-------~~d~g~~~~~~ 60 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAG-------ALDMGAQYFTA 60 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTE-------EEECSCCCBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCc-------eeecCcccccc
Confidence 489999999999999999999999999999999999999999988776 89999887754
No 32
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.73 E-value=1.3e-16 Score=173.86 Aligned_cols=86 Identities=33% Similarity=0.408 Sum_probs=69.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccC-CCcceeeEeeecCCC---CCCccceEeccccceecCCCCcHHHHH
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR-KRAGGRVYTKKMEGG---AGNRISASADLGGSVLTGTLGNPLGIL 121 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~-~r~GGr~~S~~~~g~---~g~~~~~~~D~G~~~~~~~~~~~l~~L 121 (737)
+.+||+|||||++||+||+.|+++|++|+|||++ +++|||+.|.+.... .....+..+|.|++++...+ ..+..+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~-~~~~~~ 121 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFH-PLTLAL 121 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTC-HHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchH-HHHHHH
Confidence 3489999999999999999999999999999999 999999999874310 00011358999999997664 356779
Q ss_pred HHHhCCCeeee
Q 004684 122 AKQLGSLLHKV 132 (737)
Q Consensus 122 ~~~LGl~~~~~ 132 (737)
++++|+.....
T Consensus 122 ~~~lGl~~~~~ 132 (376)
T 2e1m_A 122 IDKLGLKRRLF 132 (376)
T ss_dssp HHHTTCCEEEE
T ss_pred HHHcCCCccee
Confidence 99999987654
No 33
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.71 E-value=1.5e-16 Score=177.75 Aligned_cols=242 Identities=14% Similarity=0.125 Sum_probs=147.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeee-cC-CC------------CCCccceEeccccceecC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKK-ME-GG------------AGNRISASADLGGSVLTG 112 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~-~~-g~------------~g~~~~~~~D~G~~~~~~ 112 (737)
.+||+|||||++||+||+.|+++|++|+|+|+++++||++.|++ .. |. .+.+..+.+|+|++++..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~~ 85 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMA 85 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEET
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceeec
Confidence 48999999999999999999999999999999999999999988 21 10 011345788999998875
Q ss_pred CCCcHHHHHHHHhCCCee-e-ecCCcceEecCCcccCchhhH-H-H---------HHHHHHHHHHHHHHHHHhh---h--
Q 004684 113 TLGNPLGILAKQLGSLLH-K-VRDKCPLYRLDGNSVDPEIDM-K-V---------EADFNRLLDKASRLRQLMG---E-- 174 (737)
Q Consensus 113 ~~~~~l~~L~~~LGl~~~-~-~~~~~~~~~~~G~~~~~~~~~-~-~---------~~~~~~ll~~~~~~~~~~~---~-- 174 (737)
. ..+..+++++|+... . ......+.+.+|+.+..+.+. . . ...+.+++..+..+..... .
T Consensus 86 ~--~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 163 (433)
T 1d5t_A 86 N--GQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV 163 (433)
T ss_dssp T--SHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTTC
T ss_pred c--chHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCchhcccc
Confidence 4 367789999997632 1 122223345577654433221 1 0 1122222222221100000 0
Q ss_pred hccCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHhh---hhhchhhhhhHH-H-HhhccCCCCCCCCCeeecCCCHHHH
Q 004684 175 VAMDVSLGSALETFWRVYWDSGNAEAMNLFNWHLANL---EYANASLLSKLS-L-AFWDQDDPYDMGGDHCFLPGGNGRL 249 (737)
Q Consensus 175 ~~~~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~ls-~-~~~~~~~~~~~~g~~~~~~gG~~~L 249 (737)
.....++.++++. ...++..+.++...+... .+........+. . .+......+ ..+.++++.+|++.|
T Consensus 164 ~~~~~s~~~~l~~------~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~-g~~~~~~p~gG~~~l 236 (433)
T 1d5t_A 164 DPQNTSMRDVYRK------FDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGEL 236 (433)
T ss_dssp CTTTSBHHHHHHH------TTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS-SCCSEEEETTCTTHH
T ss_pred ccccCCHHHHHHH------cCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc-CCCcEEEeCcCHHHH
Confidence 0134456555532 234566666554332110 000101111111 1 111111111 123477899999999
Q ss_pred HHHHHH-----cCCcccCceEEEEEecCCcEEE-EECCeEEEecEEEEccChhh
Q 004684 250 VQALVE-----NVPILYEKTVHTIRYGSDGVQV-LAGSQVFEGDMVLCTVPLGV 297 (737)
Q Consensus 250 v~aLa~-----gl~I~lnt~V~~I~~~~~~V~V-~~~G~~i~AD~VI~AvP~~~ 297 (737)
+++|++ |++|+++++|++|..+++++.+ .++|++++||+||+|+++..
T Consensus 237 ~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 237 PQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 999975 6789999999999998888764 44899999999999998764
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.63 E-value=2e-16 Score=155.06 Aligned_cols=120 Identities=16% Similarity=0.176 Sum_probs=102.5
Q ss_pred cEEEEEecchhhhhhcCCChHHHHHHHHHHHHhhcCCCCCCCCCCceE--EEecCCCCCCCCCcCCCCCCCCCCCcHHHH
Q 004684 370 PLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQT--VCTRWGGDPFSLGSYSNVAVGASGDDYDIM 447 (737)
Q Consensus 370 ~~L~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~vp~p~~~--~~~rW~~~p~~~G~ys~~~pG~~~~~~~~l 447 (737)
.+|++|+.++.+..+..++++++++.++++|.++|++. +..+... ..++|..+||+.|+|+.+.||+...+++.+
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~---~~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l 113 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRR---IEVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDV 113 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGG---GGGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHH
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCC---cHhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHH
Confidence 58999999999999999999999999999999999753 3233356 889999999999999999999876667889
Q ss_pred hcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhhhhc
Q 004684 448 AESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARALR 495 (737)
Q Consensus 448 ~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~~ 495 (737)
.+|. ++||||||+|+. |+||||||+.||++||.+|++.++....+
T Consensus 114 ~~p~--grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~~~~ 158 (181)
T 2e1m_C 114 VRPE--GPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVGDTGV 158 (181)
T ss_dssp HSCB--TTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC-----
T ss_pred hCCC--CcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 9997 899999999996 89999999999999999999988665543
No 35
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.60 E-value=4.8e-15 Score=165.93 Aligned_cols=240 Identities=12% Similarity=0.128 Sum_probs=140.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecCC-------------CCCCccceEeccccceecC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEG-------------GAGNRISASADLGGSVLTG 112 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~g-------------~~g~~~~~~~D~G~~~~~~ 112 (737)
+.+||+|||||++|+++|+.|+++|++|+|+|+++++||++.+....+ ..|....+.+|++++++..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~ 98 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILV 98 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEET
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeec
Confidence 358999999999999999999999999999999999999999986532 0122346789999888864
Q ss_pred CCCcHHHHHHHHhCCCeee-ecC-CcceEe---------cCCcccCchhhH-----------HHHHHHHHHHHHHHHHHH
Q 004684 113 TLGNPLGILAKQLGSLLHK-VRD-KCPLYR---------LDGNSVDPEIDM-----------KVEADFNRLLDKASRLRQ 170 (737)
Q Consensus 113 ~~~~~l~~L~~~LGl~~~~-~~~-~~~~~~---------~~G~~~~~~~~~-----------~~~~~~~~ll~~~~~~~~ 170 (737)
. ..+..++.++|+.... +.. ...+.+ .+|+.++.+... .-+..+.+++..+..+..
T Consensus 99 ~--g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~~ 176 (475)
T 3p1w_A 99 G--GNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDA 176 (475)
T ss_dssp T--SHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCCT
T ss_pred C--cHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhhh
Confidence 3 3567788888876431 111 111111 134444322211 111223333332222110
Q ss_pred H----hhhh-ccCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHhhh----hhchhhhhhHHH--HhhccCCCCCCCCCe
Q 004684 171 L----MGEV-AMDVSLGSALETFWRVYWDSGNAEAMNLFNWHLANLE----YANASLLSKLSL--AFWDQDDPYDMGGDH 239 (737)
Q Consensus 171 ~----~~~~-~~~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~ls~--~~~~~~~~~~~~g~~ 239 (737)
. .... ..+.++.++++.+ .+++....++. +...+. +........+.. .+......+ .+...
T Consensus 177 ~~~~~~~~~~l~~~s~~e~l~~~------gls~~l~~fl~-~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y-g~s~~ 248 (475)
T 3p1w_A 177 NKRNTWDNLDPYKLTMLEIYKHF------NLCQLTIDFLG-HAVALYLNDDYLKQPAYLTLERIKLYMQSISAF-GKSPF 248 (475)
T ss_dssp TCGGGSTTCCTTTSBHHHHHHHT------TCCHHHHHHHH-HHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSE
T ss_pred ccchhhhcccccCCCHHHHHHHc------CCCHHHHHHHH-HHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc-CCCce
Confidence 0 0000 1245666665432 24555555432 211111 111111111110 111000001 12357
Q ss_pred eecCCCHHHHHHHHHH-----cCCcccCceEEEEEe-cCCcE-EEEE-CCeEEEecEEEEccCh
Q 004684 240 CFLPGGNGRLVQALVE-----NVPILYEKTVHTIRY-GSDGV-QVLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 240 ~~~~gG~~~Lv~aLa~-----gl~I~lnt~V~~I~~-~~~~V-~V~~-~G~~i~AD~VI~AvP~ 295 (737)
.++++|++.|+++|++ |++|+++++|++|.. +++++ .|++ +|++++||+||+|...
T Consensus 249 ~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 249 IYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSY 312 (475)
T ss_dssp EEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred EEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCc
Confidence 8899999999999966 678999999999998 55664 4666 7789999999999864
No 36
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.38 E-value=6.2e-11 Score=136.52 Aligned_cols=85 Identities=12% Similarity=0.103 Sum_probs=62.8
Q ss_pred CCeeecCCCHHHHHHHHHH-----cCCcccCceEEEEEecC--CcEEEEE--CCeEEEecEEEEccChhhhhcCCcccCC
Q 004684 237 GDHCFLPGGNGRLVQALVE-----NVPILYEKTVHTIRYGS--DGVQVLA--GSQVFEGDMVLCTVPLGVLKSGSIKFIP 307 (737)
Q Consensus 237 g~~~~~~gG~~~Lv~aLa~-----gl~I~lnt~V~~I~~~~--~~V~V~~--~G~~i~AD~VI~AvP~~~l~~~~i~~~p 307 (737)
+.++++.||++.|+++|++ |.+|+++++|++|..++ +++.++. +|++++||+||++. ..+. +
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~lp-------~ 438 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SYLS-------E 438 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GGBC-------T
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hhcC-------H
Confidence 4688999999999999966 66799999999999887 5666444 69999999999932 2221 1
Q ss_pred CCCHHHHHHHHhcCCcceeEEEEEcCCccc
Q 004684 308 ELPQRKLDAIKRLGYGLLNKVAMLFPYVFW 337 (737)
Q Consensus 308 ~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w 337 (737)
.+ ..++.++.+.++.+.++++.-
T Consensus 439 ~~-------~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 439 NT-------CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp TT-------TTTCCCEEEEEEEEEESSCSS
T ss_pred hH-------hccccccceEEEEEEecCCCC
Confidence 11 112345678888888888753
No 37
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.17 E-value=5.3e-10 Score=121.57 Aligned_cols=38 Identities=34% Similarity=0.587 Sum_probs=35.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
+|||+|||||+|||+||+.|+++|++|+|||+++.+|.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 49999999999999999999999999999999888764
No 38
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.08 E-value=7.5e-10 Score=126.67 Aligned_cols=37 Identities=49% Similarity=0.695 Sum_probs=34.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
++||+|||||++||++|+.|++.|++|+|||+.+.++
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4899999999999999999999999999999987654
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.05 E-value=1.2e-09 Score=117.83 Aligned_cols=40 Identities=40% Similarity=0.557 Sum_probs=36.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||++|+++|++|+|||+.+.+|+.+
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~ 43 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGT 43 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCST
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcc
Confidence 4899999999999999999999999999999998887644
No 40
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.03 E-value=2.4e-09 Score=118.49 Aligned_cols=41 Identities=34% Similarity=0.562 Sum_probs=37.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
+++||+|||||++||+||+.|+++|++|+|||+.+.+||.+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~ 66 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKI 66 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCcee
Confidence 35899999999999999999999999999999999998755
No 41
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.01 E-value=1.3e-09 Score=128.17 Aligned_cols=42 Identities=14% Similarity=0.142 Sum_probs=38.1
Q ss_pred cCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhh
Q 004684 256 NVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGV 297 (737)
Q Consensus 256 gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~ 297 (737)
|++|+++++|++|..++++|.|.+ +|++++||.||+|+....
T Consensus 431 Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 431 GLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred CCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 789999999999999999998888 778899999999998763
No 42
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.00 E-value=1.8e-09 Score=120.03 Aligned_cols=40 Identities=33% Similarity=0.455 Sum_probs=36.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||++|+++|+ +|+|||+.+.+||..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~ 46 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAIS 46 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCc
Confidence 4899999999999999999999999 999999998877643
No 43
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.00 E-value=1.6e-09 Score=117.51 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=36.8
Q ss_pred cCCcccCceEEEEEecCCcEEEEECCeEEEecEEEEccChhh
Q 004684 256 NVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGV 297 (737)
Q Consensus 256 gl~I~lnt~V~~I~~~~~~V~V~~~G~~i~AD~VI~AvP~~~ 297 (737)
|++|+++++|++|..+++++.|++++.+++||+||+|+....
T Consensus 168 Gv~i~~~~~V~~i~~~~~~~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 168 QGQVLCNHEALEIRRVDGAWEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp TCEEESSCCCCEEEEETTEEEEECSSEEEEESEEEECCGGGH
T ss_pred CCEEEcCCEEEEEEEeCCeEEEEeCCCEEEcCEEEECCChhH
Confidence 788999999999999988888888555899999999998753
No 44
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.96 E-value=4e-09 Score=124.38 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=37.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
..+||||||||++||+||++|+++|++|+|||+.+.+|+.+
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~ga 303 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGA 303 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSG
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcccccc
Confidence 35899999999999999999999999999999998888644
No 45
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.95 E-value=2e-08 Score=109.49 Aligned_cols=37 Identities=35% Similarity=0.602 Sum_probs=35.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
+||+|||||++||++|+.|++.|++|+|+|+.+.+|+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 8999999999999999999999999999999987765
No 46
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.95 E-value=4.2e-09 Score=114.48 Aligned_cols=40 Identities=25% Similarity=0.367 Sum_probs=35.7
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
..++||+|||||++||+||++|+++|++|+|+|+.+..+|
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 3458999999999999999999999999999999865544
No 47
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.94 E-value=6.1e-11 Score=108.65 Aligned_cols=107 Identities=21% Similarity=0.302 Sum_probs=69.3
Q ss_pred CeEEEecEEEEccChhhhhcCCcccCCCCCHHHHHHHHhcCCcceeEEEEEcCCccccCCCCCcceeecCCCCCcceEEE
Q 004684 281 SQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLF 360 (737)
Q Consensus 281 G~~i~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~ 360 (737)
.++++||+||+|+|+.+++ .|.|.|+||..+.+++++++|+...||++.|+++||+++...+.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd--------------- 65 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK--------------- 65 (130)
T ss_dssp CEEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH---------------
T ss_pred ceEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc---------------
Confidence 3578999999999999998 58999999999999999999999999999999999987532110
Q ss_pred eeccccCCCcEEEEEe-cchhhhhhcCCChHHHHHHHHHHHHhhcCC
Q 004684 361 YSYATVAGGPLLIALV-AGEAAHKFESMPPTDAVTKVLQILKGIYEP 406 (737)
Q Consensus 361 ~~~~~p~g~~~L~~~v-~g~~a~~~~~ls~eel~~~vl~~L~~i~~~ 406 (737)
....+....++++|+ +|+.+..|..+++ +..+.+++.|.+++|.
T Consensus 66 -~s~~~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 66 -RELDAIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPS 110 (130)
T ss_dssp -HHHHHHSTTHHHHHHHHCCCSCCCC---------------------
T ss_pred -ccCCCCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence 000111223777888 4888988988876 6678889999999973
No 48
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.92 E-value=3.1e-09 Score=116.92 Aligned_cols=40 Identities=20% Similarity=0.264 Sum_probs=36.5
Q ss_pred CCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChh
Q 004684 257 VPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (737)
Q Consensus 257 l~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~ 296 (737)
++|+++++|++|+.++++|.|++ +|++++||.||.|....
T Consensus 140 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 67999999999999999999988 88899999999998765
No 49
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.92 E-value=1.5e-08 Score=115.21 Aligned_cols=41 Identities=39% Similarity=0.501 Sum_probs=38.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.++||+|||||++||+||+.|+++|.+|+||||.+.+||..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 45899999999999999999999999999999999998753
No 50
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.91 E-value=4.7e-08 Score=110.77 Aligned_cols=39 Identities=38% Similarity=0.445 Sum_probs=35.2
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
+.++||+|||||++||++|+.|++.|++|+|||+.+.++
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 355999999999999999999999999999999987654
No 51
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.87 E-value=3.7e-08 Score=111.64 Aligned_cols=39 Identities=36% Similarity=0.451 Sum_probs=34.9
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
++++||+|||||++||++|+.|++.|++|+|||+.+.++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 47 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERT 47 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-C
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 345999999999999999999999999999999987664
No 52
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.86 E-value=6.5e-08 Score=106.58 Aligned_cols=36 Identities=47% Similarity=0.674 Sum_probs=33.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
++||+|||||++||++|+.|++.|++|+|+|+.+.+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 389999999999999999999999999999998644
No 53
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.86 E-value=6.1e-08 Score=111.56 Aligned_cols=37 Identities=32% Similarity=0.353 Sum_probs=32.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
.++||+|||||++||++|+.|++.|++|+|||+.+.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 3589999999999999999999999999999998765
No 54
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.84 E-value=1.6e-08 Score=111.29 Aligned_cols=40 Identities=43% Similarity=0.642 Sum_probs=37.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||+.|++.|.+|+|||+.+.+|+.+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~ 43 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhc
Confidence 3899999999999999999999999999999999887644
No 55
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.83 E-value=9.2e-09 Score=111.37 Aligned_cols=39 Identities=26% Similarity=0.404 Sum_probs=35.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCccee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (737)
++||+|||||++||++|++|+++|++|+|+|+.+..+|.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~ 40 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQH 40 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 389999999999999999999999999999998877553
No 56
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.82 E-value=5.3e-08 Score=106.54 Aligned_cols=50 Identities=16% Similarity=0.145 Sum_probs=39.5
Q ss_pred HHHHHHHH-HcCCcccCceEEEEEecCCcEEEEECCeEEEecEEEEccChh
Q 004684 247 GRLVQALV-ENVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLG 296 (737)
Q Consensus 247 ~~Lv~aLa-~gl~I~lnt~V~~I~~~~~~V~V~~~G~~i~AD~VI~AvP~~ 296 (737)
..|.+.+. .|++|+++++|++|..++++|.|.+++.+++||.||+|+...
T Consensus 157 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 157 AALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCCEEEcCEEEEcCCcC
Confidence 44444443 368899999999999988888887755689999999999754
No 57
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.82 E-value=5e-08 Score=106.09 Aligned_cols=42 Identities=12% Similarity=0.222 Sum_probs=36.6
Q ss_pred cCCcccCceEEEEEecCCcEEEEECCeEEEecEEEEccChhh
Q 004684 256 NVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGV 297 (737)
Q Consensus 256 gl~I~lnt~V~~I~~~~~~V~V~~~G~~i~AD~VI~AvP~~~ 297 (737)
|++|+++++|++|+.+++++.|.+++.+++||.||+|+....
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 164 GAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp TCEEECSCCEEEEEECSSCEEEEETTEEEEEEEEEECCGGGH
T ss_pred CCEEEcCcEEEEEEecCCeEEEEeCCCEEEeCEEEEecCccH
Confidence 688999999999999888888888666899999999998653
No 58
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.81 E-value=1.4e-08 Score=113.55 Aligned_cols=40 Identities=33% Similarity=0.459 Sum_probs=37.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCccee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (737)
.++||+|||||++||+||+.|++.|.+|+|||+.+.+|+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~ 64 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRK 64 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCce
Confidence 4589999999999999999999999999999999988864
No 59
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.80 E-value=2.2e-08 Score=109.56 Aligned_cols=39 Identities=33% Similarity=0.463 Sum_probs=35.1
Q ss_pred CCCCcEEEECccHHHHHHHHHHHH-CC-CcEEEEccCCCcce
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMR-LG-FRVTVLEGRKRAGG 84 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak-~G-~~V~VLEa~~r~GG 84 (737)
..++||+|||||++||++|++|++ +| ++|+|||+.+ +|+
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~-~~~ 59 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW-LAG 59 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS-TTC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC-CCC
Confidence 345899999999999999999999 99 9999999988 554
No 60
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.80 E-value=2.2e-08 Score=109.84 Aligned_cols=44 Identities=14% Similarity=-0.000 Sum_probs=38.4
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhhh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVL 298 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l 298 (737)
.+++|+++++|++|+.++++|.|++ +|++++||.||.|....-.
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 3788999999999999999999888 7889999999999876543
No 61
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.80 E-value=3.6e-08 Score=107.17 Aligned_cols=41 Identities=10% Similarity=0.120 Sum_probs=35.6
Q ss_pred cCCcccCceEEEEEecCCcEE-EEECCeEEEecEEEEccChh
Q 004684 256 NVPILYEKTVHTIRYGSDGVQ-VLAGSQVFEGDMVLCTVPLG 296 (737)
Q Consensus 256 gl~I~lnt~V~~I~~~~~~V~-V~~~G~~i~AD~VI~AvP~~ 296 (737)
+++|+++++|++|..++++|. |++++.+++||.||+|+...
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~g~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAW 204 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTEEEECSEEEECCGGG
T ss_pred CCEEECCceEEEEEEECCEEEEEEECCcEEECCEEEECcchh
Confidence 688999999999999888887 77744589999999999765
No 62
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.79 E-value=5.8e-08 Score=112.11 Aligned_cols=37 Identities=35% Similarity=0.491 Sum_probs=34.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
.+||+|||||++||+||+.|++.|++|+|+|+.+.++
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR 59 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC
Confidence 4899999999999999999999999999999986544
No 63
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.77 E-value=1.5e-07 Score=108.21 Aligned_cols=40 Identities=33% Similarity=0.518 Sum_probs=37.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCccee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (737)
.++||+|||||++||+||+.|+++|.+|+|||+.+.+||.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~ 159 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGN 159 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 3489999999999999999999999999999999988874
No 64
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.76 E-value=2.7e-07 Score=104.83 Aligned_cols=35 Identities=31% Similarity=0.412 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
++||+|||||++||+||+.|++.|++|+|+|+.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~ 41 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAF 41 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCC
Confidence 38999999999999999999999999999999864
No 65
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.76 E-value=1.5e-08 Score=116.06 Aligned_cols=47 Identities=32% Similarity=0.536 Sum_probs=41.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEeeecC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKME 92 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S~~~~ 92 (737)
..+||+|||||++||+||+.|++.|++|+|+|+++.+||.+...+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~yp 66 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYP 66 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCT
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCC
Confidence 34899999999999999999999999999999999999866544333
No 66
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.75 E-value=1.4e-07 Score=108.82 Aligned_cols=40 Identities=33% Similarity=0.511 Sum_probs=37.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|+++|.+|+|||+.+.+||..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNA 165 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCch
Confidence 4899999999999999999999999999999999988743
No 67
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.70 E-value=3.2e-08 Score=105.86 Aligned_cols=39 Identities=36% Similarity=0.600 Sum_probs=36.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
+||+|||||++||+||+.|++.|++|+|+|+++.+||.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~ 42 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAW 42 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 799999999999999999999999999999999998753
No 68
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.66 E-value=3.6e-08 Score=112.45 Aligned_cols=42 Identities=33% Similarity=0.430 Sum_probs=38.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeE
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (737)
..+||+|||||++||+||+.|++.|++|+|||+.+.+++|..
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~ 147 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTK 147 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCccccccc
Confidence 348999999999999999999999999999999999987653
No 69
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.66 E-value=5.3e-08 Score=106.82 Aligned_cols=52 Identities=10% Similarity=0.106 Sum_probs=41.3
Q ss_pred HHHHHHHHHc---CCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChhhh
Q 004684 247 GRLVQALVEN---VPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVL 298 (737)
Q Consensus 247 ~~Lv~aLa~g---l~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~~l 298 (737)
..|.+.|.+. ++|+++++|++|+.++++|.|++ +|++++||.||.|......
T Consensus 128 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 128 NDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp HHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred HHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 3344445443 46999999999999888899888 7888999999999987543
No 70
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.65 E-value=9.5e-08 Score=109.40 Aligned_cols=41 Identities=44% Similarity=0.657 Sum_probs=38.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeE
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (737)
.+||+|||||++||+||+.|++.|++|+|||+++.+||.+.
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 48999999999999999999999999999999999998654
No 71
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.65 E-value=6.2e-08 Score=110.77 Aligned_cols=46 Identities=28% Similarity=0.532 Sum_probs=40.2
Q ss_pred CCcEEEECccHHHHHHHHHHH-HCCCcEEEEccCCCcceeeEeeecC
Q 004684 47 KLRVLVIGAGLAGLAAARQLM-RLGFRVTVLEGRKRAGGRVYTKKME 92 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~La-k~G~~V~VLEa~~r~GGr~~S~~~~ 92 (737)
.+||+|||||++||+||+.|+ +.|++|+|+|+++.+||.+......
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~yp 54 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYP 54 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCC
Confidence 389999999999999999999 8999999999999999865544333
No 72
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.62 E-value=2.3e-07 Score=101.33 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=39.4
Q ss_pred HHHHHHHHcC--CcccCceEEEEEecCC-cEEEEE-CCeEEEecEEEEccChhh
Q 004684 248 RLVQALVENV--PILYEKTVHTIRYGSD-GVQVLA-GSQVFEGDMVLCTVPLGV 297 (737)
Q Consensus 248 ~Lv~aLa~gl--~I~lnt~V~~I~~~~~-~V~V~~-~G~~i~AD~VI~AvP~~~ 297 (737)
.|.+.|.+.+ .|+++++|++++..++ +|+|+. +|++++||.||-|-...-
T Consensus 113 ~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 113 ELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp HHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCc
Confidence 4555566655 5999999999987655 588888 899999999999977653
No 73
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.60 E-value=1.1e-07 Score=104.07 Aligned_cols=49 Identities=14% Similarity=0.273 Sum_probs=39.8
Q ss_pred HHHHHHH--cCCcccCceEEEEEecCCcE--EEEE-CCeEEEecEEEEccChhh
Q 004684 249 LVQALVE--NVPILYEKTVHTIRYGSDGV--QVLA-GSQVFEGDMVLCTVPLGV 297 (737)
Q Consensus 249 Lv~aLa~--gl~I~lnt~V~~I~~~~~~V--~V~~-~G~~i~AD~VI~AvP~~~ 297 (737)
|.+.+.+ +++|+++++|++|+.++++| .|++ +|++++||.||.|.....
T Consensus 113 L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 113 VLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred HHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 3444443 67899999999999988888 7877 778999999999997653
No 74
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.59 E-value=6.9e-08 Score=111.00 Aligned_cols=39 Identities=31% Similarity=0.461 Sum_probs=36.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCccee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (737)
.+||+|||||++|+++|+.|+++|++|+|+|+++..||.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~Gt 56 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGT 56 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCc
Confidence 499999999999999999999999999999999776664
No 75
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.57 E-value=2e-07 Score=112.20 Aligned_cols=36 Identities=33% Similarity=0.601 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~ 82 (737)
++||+|||||++||++|++|+++|+ +|+|||+...+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~ 40 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLN 40 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 4899999999999999999999998 99999998764
No 76
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.55 E-value=6.2e-08 Score=110.94 Aligned_cols=41 Identities=34% Similarity=0.577 Sum_probs=38.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeE
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (737)
.+||+|||||++||+||+.|++.|++|+|+|+++.+||...
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 48999999999999999999999999999999999998553
No 77
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.55 E-value=2.1e-07 Score=102.47 Aligned_cols=37 Identities=35% Similarity=0.597 Sum_probs=34.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCc-EEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFR-VTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~-V~VLEa~~r~G 83 (737)
++||+|||||++||++|+.|++.|++ |+|||+.+.++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 38999999999999999999999999 99999988764
No 78
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.54 E-value=1.1e-07 Score=101.34 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=37.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 4899999999999999999999999999999999888754
No 79
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.53 E-value=1.9e-07 Score=104.24 Aligned_cols=40 Identities=35% Similarity=0.535 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|. +|+|||+++.+||..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~ 47 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVW 47 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCee
Confidence 4899999999999999999999999 999999999999854
No 80
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.53 E-value=1.7e-07 Score=98.69 Aligned_cols=38 Identities=29% Similarity=0.477 Sum_probs=35.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+|+|++ +||.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~ 52 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQL 52 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCee
Confidence 479999999999999999999999999999997 77744
No 81
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.49 E-value=1.9e-06 Score=99.18 Aligned_cols=40 Identities=40% Similarity=0.534 Sum_probs=37.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+|||+.+.+||..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 4799999999999999999999999999999999998753
No 82
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.44 E-value=6.8e-07 Score=96.36 Aligned_cols=39 Identities=36% Similarity=0.556 Sum_probs=35.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||+.|++.|+ +|+|+|+++ +||.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~ 43 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSF 43 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcc
Confidence 3899999999999999999999999 999999988 88743
No 83
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.39 E-value=1.1e-07 Score=101.41 Aligned_cols=41 Identities=29% Similarity=0.564 Sum_probs=37.6
Q ss_pred CCcEEEECccHHHHHHHHHHHH--CCCcEEEEccCCCcceeeE
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR--LGFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak--~G~~V~VLEa~~r~GGr~~ 87 (737)
.+||+|||||+|||+||++|++ .|++|+|||+.+.+||.+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 3899999999999999999985 5999999999999999764
No 84
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.35 E-value=6.9e-06 Score=94.80 Aligned_cols=38 Identities=32% Similarity=0.386 Sum_probs=35.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
++||+|||||++||+||+.|+++|.+|+|||+....||
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g 44 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS 44 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCC
Confidence 48999999999999999999999999999999887765
No 85
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.34 E-value=3.7e-07 Score=104.66 Aligned_cols=37 Identities=27% Similarity=0.324 Sum_probs=34.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
++||+|||||++||++|+.|++.|++|+|||+.+.++
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTI 62 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 3799999999999999999999999999999988664
No 86
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.31 E-value=9.4e-06 Score=94.07 Aligned_cols=38 Identities=32% Similarity=0.405 Sum_probs=35.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
.+||+|||||+|||+||+.|+++|.+|+|||+....||
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g 55 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRS 55 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGS
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 48999999999999999999999999999999876665
No 87
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.29 E-value=3.7e-07 Score=96.38 Aligned_cols=39 Identities=31% Similarity=0.549 Sum_probs=36.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
+|||+|||||+|||+||++|++.|++|+|+|+ +.+||.|
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~ 44 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQM 44 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCee
Confidence 59999999999999999999999999999998 5788765
No 88
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.21 E-value=6.4e-07 Score=94.33 Aligned_cols=39 Identities=31% Similarity=0.419 Sum_probs=34.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCccee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (737)
+.|||+|||||+|||+||++|+++|++|+|+|+. .+||.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~ 43 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNR 43 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCe
Confidence 3499999999999999999999999999999985 45653
No 89
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.14 E-value=8.2e-07 Score=94.21 Aligned_cols=43 Identities=33% Similarity=0.414 Sum_probs=37.2
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccC----CCcceeeE
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR----KRAGGRVY 87 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~----~r~GGr~~ 87 (737)
+..+||+|||||++||+||+.|++.|++|+|+|+. .++||.+.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~ 66 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLT 66 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccc
Confidence 34589999999999999999999999999999994 47777554
No 90
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.10 E-value=1.2e-06 Score=92.26 Aligned_cols=37 Identities=38% Similarity=0.465 Sum_probs=33.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
.|||+|||||+|||+||.+|++.|++|+|+|+.. .||
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg 40 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGG 40 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCC
Confidence 4899999999999999999999999999999964 444
No 91
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.07 E-value=1.6e-06 Score=97.81 Aligned_cols=40 Identities=40% Similarity=0.575 Sum_probs=36.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.++||+|||||++||+||+.|++.|++|+|+|+ +.+||.|
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~ 64 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTC 64 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCce
Confidence 358999999999999999999999999999999 7888854
No 92
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.07 E-value=8.5e-05 Score=86.60 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=32.6
Q ss_pred CCcEEEECccHHHHHHHHHHH---H-CCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLM---R-LGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~La---k-~G~~V~VLEa~~r 81 (737)
.+||+|||||+|||+||+.|+ + .|.+|+|+|+...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 489999999999999999999 6 8999999999875
No 93
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.07 E-value=1.7e-06 Score=93.12 Aligned_cols=40 Identities=25% Similarity=0.358 Sum_probs=37.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+|+|+.+.+||.+
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL 53 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc
Confidence 4899999999999999999999999999999999988755
No 94
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.05 E-value=3e-06 Score=91.37 Aligned_cols=35 Identities=37% Similarity=0.621 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
++||+|||||++||++|++|+++|++|+|||+...
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 48999999999999999999999999999999763
No 95
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.05 E-value=2.2e-06 Score=90.65 Aligned_cols=39 Identities=26% Similarity=0.331 Sum_probs=37.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
+||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 799999999999999999999999999999999998855
No 96
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.04 E-value=2.1e-06 Score=96.97 Aligned_cols=40 Identities=35% Similarity=0.618 Sum_probs=37.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||+.|++.|++|+|+|+++.+||.|
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~ 64 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTC 64 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 4899999999999999999999999999999999999854
No 97
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.03 E-value=2.2e-06 Score=89.51 Aligned_cols=38 Identities=37% Similarity=0.601 Sum_probs=36.0
Q ss_pred CcEEEECccHHHHHHHHHHHHC-CCcEEEEccCCCccee
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRKRAGGR 85 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~r~GGr 85 (737)
+||+|||||++||+||+.|++. |.+|+|+|+.+.+||.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 8999999999999999999997 9999999999998864
No 98
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.03 E-value=3.5e-06 Score=94.16 Aligned_cols=41 Identities=49% Similarity=0.627 Sum_probs=38.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
..+||+|||||+|||+||++|++.|++|+|||+.+++||.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 34899999999999999999999999999999999999854
No 99
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.03 E-value=2.3e-06 Score=90.39 Aligned_cols=39 Identities=41% Similarity=0.675 Sum_probs=35.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+|+|+ ..+||.+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 48999999999999999999999999999999 5677754
No 100
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.00 E-value=2.1e-06 Score=90.00 Aligned_cols=39 Identities=38% Similarity=0.572 Sum_probs=36.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEE-EccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTV-LEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~V-LEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+| +|+ +.+||.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~ 43 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQI 43 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGG
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCcee
Confidence 48999999999999999999999999999 999 7888865
No 101
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.99 E-value=2.5e-06 Score=95.57 Aligned_cols=39 Identities=33% Similarity=0.551 Sum_probs=36.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||+.|++.|++|+|+|+ +.+||.+
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~ 43 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTC 43 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcc
Confidence 48999999999999999999999999999999 7888854
No 102
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.98 E-value=3.7e-06 Score=95.58 Aligned_cols=55 Identities=33% Similarity=0.485 Sum_probs=34.0
Q ss_pred HhhhhhcCCcccccccCCCCCCCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 23 SNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 23 ~~g~~~~g~~~~~~~~~p~~~~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|++.++..-...+.++ ...++||+|||||++||+||..|++.|++|+|+|+.+
T Consensus 11 ~~~~~~~~~~m~~~~~~~---~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 11 SSGLVPRGSHMNGPEDLP---KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp ---------------CCC---SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cCCcccCCCCCCcccccC---cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 356676654433322222 2235899999999999999999999999999999965
No 103
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.98 E-value=3.6e-06 Score=89.98 Aligned_cols=40 Identities=35% Similarity=0.625 Sum_probs=37.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|+++ |++|+|+|+...+||.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 38999999999999999999997 99999999999988744
No 104
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.97 E-value=3e-06 Score=94.97 Aligned_cols=40 Identities=35% Similarity=0.527 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||+.|++.|++|+|+|+++.+||.+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~ 43 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNC 43 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcc
Confidence 3899999999999999999999999999999999999855
No 105
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.96 E-value=3e-06 Score=90.91 Aligned_cols=37 Identities=32% Similarity=0.424 Sum_probs=33.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCC------CcEEEEccCCCcce
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG------FRVTVLEGRKRAGG 84 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G------~~V~VLEa~~r~GG 84 (737)
+||+|||||++||++|++|+++| .+|+|||+....+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 59999999999999999999998 89999999775443
No 106
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.96 E-value=3.8e-06 Score=88.94 Aligned_cols=39 Identities=36% Similarity=0.526 Sum_probs=36.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+|+|+. .+||.+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 489999999999999999999999999999998 788754
No 107
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.95 E-value=5.1e-06 Score=94.52 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=37.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.++||+|||||++|++||++|++.|++|+|+|+++.+||.+
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 82 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSC 82 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 35999999999999999999999999999999998788744
No 108
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.95 E-value=3.7e-06 Score=94.24 Aligned_cols=40 Identities=33% Similarity=0.560 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 41 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTC 41 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcC
Confidence 4899999999999999999999999999999998998854
No 109
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.93 E-value=5.9e-06 Score=89.75 Aligned_cols=38 Identities=34% Similarity=0.433 Sum_probs=35.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
.+||+|||||++||++|+.|++.|++|+|+|+.+.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 48999999999999999999999999999999887653
No 110
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.93 E-value=4.8e-06 Score=93.46 Aligned_cols=40 Identities=38% Similarity=0.610 Sum_probs=37.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||+.|++.|++|+|+|+++.+||+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 5999999999999999999999999999999998887643
No 111
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.93 E-value=6.2e-06 Score=97.09 Aligned_cols=44 Identities=45% Similarity=0.672 Sum_probs=40.4
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeEe
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYT 88 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~S 88 (737)
...+||+|||||++||+||+.|++.|++|+|+|+++++||.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 45689999999999999999999999999999999999997653
No 112
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.92 E-value=3.6e-06 Score=94.58 Aligned_cols=40 Identities=43% Similarity=0.676 Sum_probs=36.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
..+||+|||||++||+||+.|++.|++|+|+|+. .+||.|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcc
Confidence 3589999999999999999999999999999975 788754
No 113
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.89 E-value=6.2e-06 Score=92.37 Aligned_cols=40 Identities=38% Similarity=0.627 Sum_probs=37.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||+.|++.|++|+|+|+.+.+||.+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Confidence 4999999999999999999999999999999998888744
No 114
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.89 E-value=7.1e-06 Score=92.82 Aligned_cols=37 Identities=30% Similarity=0.443 Sum_probs=33.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
.+||+|||||++|+++|+.|+++|++|+|+|+.+..+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~ 39 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLAC 39 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCC
Confidence 4899999999999999999999999999999986443
No 115
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.88 E-value=8.4e-06 Score=84.59 Aligned_cols=36 Identities=33% Similarity=0.512 Sum_probs=33.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
+||+|||||++||+||+.|++.|++|+|+|+++..|
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~ 38 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN 38 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccc
Confidence 799999999999999999999999999999976433
No 116
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.88 E-value=6.1e-06 Score=87.66 Aligned_cols=39 Identities=31% Similarity=0.566 Sum_probs=36.4
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcceee
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~GGr~ 86 (737)
+||+|||||++||+||+.|++. |++|+|+|+.+.+||.+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 6999999999999999999998 99999999999998743
No 117
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.87 E-value=5.9e-06 Score=90.77 Aligned_cols=37 Identities=32% Similarity=0.419 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
.+||+|||||++||++|++|+++ |++|+|||+.+..+
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~ 74 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPN 74 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 48999999999999999999999 99999999975444
No 118
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.87 E-value=6e-06 Score=92.13 Aligned_cols=39 Identities=44% Similarity=0.655 Sum_probs=36.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
+||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 40 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTC 40 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCcc
Confidence 799999999999999999999999999999998898854
No 119
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.86 E-value=7.5e-06 Score=85.93 Aligned_cols=38 Identities=32% Similarity=0.528 Sum_probs=34.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccCCCcceee
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRV 86 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~ 86 (737)
+||+|||||++||+||+.|++.|+ +|+|+|+ +.+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~-~~~gg~~ 40 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEK-GMPGGQI 40 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECS-SSTTCGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcC-CCCCccc
Confidence 799999999999999999999999 9999999 4677644
No 120
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.85 E-value=7.5e-06 Score=87.18 Aligned_cols=39 Identities=38% Similarity=0.474 Sum_probs=34.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCccee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (737)
..+||+|||||++||+||+.|++.|++|+|+|+. .+||.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 3589999999999999999999999999999974 67764
No 121
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.85 E-value=5.4e-06 Score=92.14 Aligned_cols=38 Identities=34% Similarity=0.484 Sum_probs=34.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r~GG 84 (737)
++||+|||||++||++|++|+++| .+|+|||+...+|+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGS 61 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCC
Confidence 489999999999999999999999 99999999555653
No 122
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.84 E-value=9.7e-06 Score=93.24 Aligned_cols=38 Identities=32% Similarity=0.530 Sum_probs=35.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
.+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 48999999999999999999999999999999875554
No 123
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.84 E-value=1.1e-05 Score=81.67 Aligned_cols=34 Identities=35% Similarity=0.537 Sum_probs=32.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++||+|||||++||+||+.|++.|.+|+|+|++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4899999999999999999999999999999974
No 124
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.84 E-value=1e-05 Score=87.96 Aligned_cols=35 Identities=37% Similarity=0.591 Sum_probs=33.1
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~ 82 (737)
+||+|||||++||++|+.|+++ |++|+|||+.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998776
No 125
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.84 E-value=8.8e-06 Score=88.68 Aligned_cols=36 Identities=33% Similarity=0.511 Sum_probs=33.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
++||+|||||++||++|+.|++.|++|+|||+.+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 37 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPD 37 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 389999999999999999999999999999998754
No 126
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.83 E-value=7.7e-06 Score=92.17 Aligned_cols=33 Identities=39% Similarity=0.633 Sum_probs=31.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEcc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (737)
.++||+|||||++||+||..|++.|++|+|+|+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk 37 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADY 37 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 348999999999999999999999999999998
No 127
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.83 E-value=1.1e-05 Score=95.68 Aligned_cols=43 Identities=40% Similarity=0.647 Sum_probs=39.5
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeE
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (737)
...+||+|||||+|||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeee
Confidence 3458999999999999999999999999999999999998664
No 128
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.83 E-value=6.6e-06 Score=92.42 Aligned_cols=40 Identities=38% Similarity=0.626 Sum_probs=37.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 3899999999999999999999999999999988888744
No 129
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.83 E-value=1.3e-05 Score=90.69 Aligned_cols=39 Identities=41% Similarity=0.577 Sum_probs=36.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
..+||+|||||++||++|..|++.|++|+|+|+.+.+|+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 358999999999999999999999999999999988763
No 130
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.81 E-value=8.2e-06 Score=86.54 Aligned_cols=39 Identities=28% Similarity=0.457 Sum_probs=34.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEcc----CCCccee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEG----RKRAGGR 85 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa----~~r~GGr 85 (737)
.+||+|||||++||+||+.|++.|++|+|+|+ ...+||.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~ 50 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ 50 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce
Confidence 37999999999999999999999999999998 4455543
No 131
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.81 E-value=8.1e-06 Score=91.58 Aligned_cols=40 Identities=35% Similarity=0.583 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 4899999999999999999999999999999998898854
No 132
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.80 E-value=1.3e-05 Score=89.80 Aligned_cols=40 Identities=28% Similarity=0.485 Sum_probs=37.5
Q ss_pred CcEEEECccHHHHHHHHHHHH---CCCc---EEEEccCCCcceeeE
Q 004684 48 LRVLVIGAGLAGLAAARQLMR---LGFR---VTVLEGRKRAGGRVY 87 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak---~G~~---V~VLEa~~r~GGr~~ 87 (737)
+||+|||||++||+||..|++ .|++ |+|||+++.+||.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee
Confidence 799999999999999999999 9999 999999999998654
No 133
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.80 E-value=7.9e-06 Score=91.12 Aligned_cols=36 Identities=39% Similarity=0.666 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
++||+|||||++||+||+.|+++|++|+|+|+.+.+
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 389999999999999999999999999999998764
No 134
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.79 E-value=1.2e-05 Score=90.60 Aligned_cols=34 Identities=38% Similarity=0.518 Sum_probs=31.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++||+|||||++||+||+.|++.|++|+|+|+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4599999999999999999999999999999963
No 135
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.79 E-value=1.1e-05 Score=93.01 Aligned_cols=39 Identities=38% Similarity=0.641 Sum_probs=36.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHC------CCcEEEEccCCCccee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL------GFRVTVLEGRKRAGGR 85 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~------G~~V~VLEa~~r~GGr 85 (737)
.+||+|||||++||+||+.|++. |++|+|||+.+.+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 48999999999999999999999 9999999999888864
No 136
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.78 E-value=1e-05 Score=90.59 Aligned_cols=39 Identities=33% Similarity=0.637 Sum_probs=35.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||++|++.|++|+|+|+. .+||.|
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 42 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTC 42 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcC
Confidence 489999999999999999999999999999997 777744
No 137
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.78 E-value=9e-06 Score=91.49 Aligned_cols=40 Identities=33% Similarity=0.520 Sum_probs=37.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 3899999999999999999999999999999988888744
No 138
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.77 E-value=9.3e-06 Score=91.30 Aligned_cols=39 Identities=33% Similarity=0.585 Sum_probs=35.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||+.|++.|++|+|+|++ .+||.|
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 49 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTC 49 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHH
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcC
Confidence 489999999999999999999999999999996 677754
No 139
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.77 E-value=1.4e-05 Score=88.66 Aligned_cols=34 Identities=41% Similarity=0.498 Sum_probs=32.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++||+|||||++||++|+.|+++|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999976
No 140
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.77 E-value=1e-05 Score=91.37 Aligned_cols=40 Identities=33% Similarity=0.449 Sum_probs=35.1
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEc--------cCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLE--------GRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLE--------a~~r~GGr~ 86 (737)
++||+|||||++|++||++|++ .|++|+|+| +.+.+||.|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c 51 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTC 51 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccc
Confidence 4899999999999999999999 999999999 356666643
No 141
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.77 E-value=1.5e-05 Score=89.24 Aligned_cols=39 Identities=38% Similarity=0.543 Sum_probs=36.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||++|++.|++|+|+|++ .+||.+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~ 42 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTC 42 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccc
Confidence 489999999999999999999999999999997 788754
No 142
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.77 E-value=9.6e-06 Score=85.41 Aligned_cols=39 Identities=28% Similarity=0.560 Sum_probs=35.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+|+|+ ..+||.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 43 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQL 43 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceE
Confidence 38999999999999999999999999999997 4777754
No 143
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.75 E-value=1.1e-05 Score=91.00 Aligned_cols=39 Identities=31% Similarity=0.480 Sum_probs=35.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||+.|++.|++|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 389999999999999999999999999999995 588754
No 144
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.75 E-value=1e-05 Score=90.26 Aligned_cols=39 Identities=23% Similarity=0.509 Sum_probs=35.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||++|++.|++|+|+|++ .+||.|
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 42 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTC 42 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcc
Confidence 489999999999999999999999999999997 778754
No 145
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.73 E-value=1.6e-05 Score=92.23 Aligned_cols=40 Identities=28% Similarity=0.517 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++||+||+.|++.|++|+|+|+.+..||.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 5899999999999999999999999999999999998843
No 146
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.73 E-value=1.2e-05 Score=89.56 Aligned_cols=39 Identities=38% Similarity=0.583 Sum_probs=36.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||..|++.|++|+|+|+. .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 489999999999999999999999999999997 788754
No 147
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.73 E-value=1.3e-05 Score=89.70 Aligned_cols=40 Identities=33% Similarity=0.579 Sum_probs=36.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeE
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (737)
.+||+|||||++|++||..|++.|++|+|+|+ +.+||.|.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 48999999999999999999999999999999 78888653
No 148
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.72 E-value=1.5e-05 Score=92.98 Aligned_cols=38 Identities=37% Similarity=0.364 Sum_probs=35.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
++||+|||||++||+||+.|+++|.+|+|||+....+|
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g 42 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRS 42 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGS
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 48999999999999999999999999999999876654
No 149
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.72 E-value=9.9e-06 Score=91.57 Aligned_cols=39 Identities=31% Similarity=0.440 Sum_probs=36.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHC---CCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL---GFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~---G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||++|++. |++|+|+|+++ +||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~ 43 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAA 43 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcc
Confidence 38999999999999999999999 99999999987 88854
No 150
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.70 E-value=1.7e-05 Score=83.19 Aligned_cols=37 Identities=41% Similarity=0.635 Sum_probs=33.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
+||+|||||++||+||+.|++.|++|+|+|+ ++||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~ 38 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQI 38 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCcee
Confidence 7999999999999999999999999999985 466643
No 151
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.69 E-value=1.6e-05 Score=88.88 Aligned_cols=38 Identities=34% Similarity=0.558 Sum_probs=35.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
+||+|||||++|++||+.|++.|++|+|+|++ .+||.+
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 79999999999999999999999999999997 677644
No 152
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.69 E-value=1.9e-05 Score=90.18 Aligned_cols=38 Identities=37% Similarity=0.490 Sum_probs=34.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCccee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (737)
.+||+|||||++||+||+.|++ |.+|+|||+.+..||.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 4899999999999999999999 9999999999877753
No 153
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.69 E-value=2.7e-05 Score=91.40 Aligned_cols=42 Identities=36% Similarity=0.529 Sum_probs=38.8
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
...+||+|||||+|||+||+.|++.|++|+|+|+++.+||.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~ 412 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQF 412 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCee
Confidence 345899999999999999999999999999999999999865
No 154
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.68 E-value=1.9e-05 Score=89.31 Aligned_cols=39 Identities=38% Similarity=0.624 Sum_probs=35.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++||+||+.|++.|++|+|+|++ .+||.|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c 40 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTC 40 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccc
Confidence 389999999999999999999999999999997 578754
No 155
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.68 E-value=3e-05 Score=74.69 Aligned_cols=33 Identities=45% Similarity=0.753 Sum_probs=31.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+||+|||||++|+.+|..|++.|.+|+|+|+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999976
No 156
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.65 E-value=1.4e-05 Score=90.35 Aligned_cols=31 Identities=39% Similarity=0.610 Sum_probs=30.1
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLE 77 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLE 77 (737)
++||+|||||++|++||++|++ .|++|+|+|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 4899999999999999999999 999999999
No 157
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.64 E-value=1.8e-05 Score=88.23 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=35.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-----CcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG-----FRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-----~~V~VLEa~~r~G 83 (737)
.+||+|||||++||+||+.|++.| .+|+|||+++.+|
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 479999999999999999999999 9999999999887
No 158
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.64 E-value=3.1e-05 Score=86.94 Aligned_cols=35 Identities=43% Similarity=0.733 Sum_probs=32.6
Q ss_pred cEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 49 RVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
||+|||||++||+||+.|++.|.+|+|+|+. ..||
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g 35 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGG 35 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCc
Confidence 7999999999999999999999999999998 5555
No 159
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.63 E-value=3.1e-05 Score=88.29 Aligned_cols=34 Identities=29% Similarity=0.481 Sum_probs=32.1
Q ss_pred CCcEEEECccHHHHHHHHHHHH---CCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~ 80 (737)
.+||+|||||++||++|+.|++ .|++|+|+|+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 4899999999999999999999 999999999964
No 160
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.62 E-value=7.4e-05 Score=84.45 Aligned_cols=40 Identities=20% Similarity=0.037 Sum_probs=32.1
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
.+-+||||||||++||++|..|.+.|...+++|+.+..|+
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 3458999999999999999999999988888888877765
No 161
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.60 E-value=2.6e-05 Score=87.25 Aligned_cols=39 Identities=33% Similarity=0.582 Sum_probs=35.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
++||+|||||++|++||..|++.|++|+|+|+++ +||.|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 3899999999999999999999999999999976 77744
No 162
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.60 E-value=5.8e-05 Score=92.67 Aligned_cols=40 Identities=33% Similarity=0.632 Sum_probs=37.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||+|||+||++|++.|+ +|+|+|+.+++||.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 4899999999999999999999999 799999999999964
No 163
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.59 E-value=2.9e-05 Score=89.73 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=35.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC--CcEEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r~GG 84 (737)
.+||+|||||++||+||+.|++.| .+|+|||+....+|
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~ 44 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS 44 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCC
Confidence 389999999999999999999999 99999999876665
No 164
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.58 E-value=3.1e-05 Score=87.59 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=30.5
Q ss_pred CcEEEECccHHHHHHHHHHHH---CCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~ 80 (737)
+||+|||||++|+++|+.|++ .|++|+|+|+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 799999999999999999999 999999999965
No 165
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.58 E-value=3.6e-05 Score=88.73 Aligned_cols=38 Identities=29% Similarity=0.399 Sum_probs=34.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC-Ccce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK-RAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~-r~GG 84 (737)
.+||+|||||++|++||+.|++.|.+|+|+|+.. .+|+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 4999999999999999999999999999999974 4553
No 166
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.56 E-value=4.3e-05 Score=87.79 Aligned_cols=37 Identities=32% Similarity=0.519 Sum_probs=34.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC-Ccc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK-RAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~-r~G 83 (737)
.+||+|||||+||++||+.|++.|.+|+|+|++. .+|
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccC
Confidence 4999999999999999999999999999999974 555
No 167
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.56 E-value=3.5e-05 Score=94.00 Aligned_cols=41 Identities=54% Similarity=0.766 Sum_probs=39.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeE
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (737)
.+||+|||||+|||+||..|++.|++|+|+|+++++||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 47999999999999999999999999999999999999887
No 168
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.56 E-value=4.8e-05 Score=86.52 Aligned_cols=35 Identities=23% Similarity=0.409 Sum_probs=32.4
Q ss_pred CCcEEEECccHHHHHHHHHHHH------------CCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR------------LGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak------------~G~~V~VLEa~~r 81 (737)
.+||+|||||++||+||..|++ .|++|+|+|+.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 3899999999999999999999 9999999998653
No 169
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.55 E-value=4.5e-05 Score=88.93 Aligned_cols=37 Identities=32% Similarity=0.521 Sum_probs=34.1
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa~~r~G 83 (737)
.+||+|||||++||++|+.|++ .|++|+|||+.+.++
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 4799999999999999999999 999999999987553
No 170
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.55 E-value=5.8e-05 Score=81.44 Aligned_cols=37 Identities=49% Similarity=0.618 Sum_probs=34.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcce
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (737)
+||+|||||++|+.||+.|++.|++|+|+|++...+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~t 38 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMT 38 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCC
Confidence 7999999999999999999999999999999876554
No 171
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.54 E-value=5.4e-05 Score=86.61 Aligned_cols=34 Identities=29% Similarity=0.404 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHH---CCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~ 80 (737)
.+||+|||||++|++||+.|++ .|++|+|+|+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4899999999999999999999 999999999965
No 172
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.54 E-value=2.5e-05 Score=88.17 Aligned_cols=40 Identities=35% Similarity=0.619 Sum_probs=37.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceeeE
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (737)
.+||+|||||++||+||++|++. ++|+|||+++++||.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 36999999999999999999999 99999999999998654
No 173
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.53 E-value=4.5e-05 Score=84.95 Aligned_cols=36 Identities=25% Similarity=0.533 Sum_probs=34.2
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
+||+|||||++||+||+.|++. |++|+|+|+++.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 7999999999999999999998 89999999998776
No 174
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.53 E-value=4.4e-05 Score=88.05 Aligned_cols=37 Identities=32% Similarity=0.490 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC-Ccc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK-RAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~-r~G 83 (737)
.+||+|||||+||++||+.|++.|.+|+|+|+.. .+|
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 4999999999999999999999999999999974 444
No 175
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.52 E-value=3.1e-05 Score=86.47 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=37.9
Q ss_pred CCcEEEECccHHHHHHHHHHHH-C------CCcEEEEccCCCcceeeE
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR-L------GFRVTVLEGRKRAGGRVY 87 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~------G~~V~VLEa~~r~GGr~~ 87 (737)
.+||+|||||++||+||..|++ . |++|+|+|+.+.+||.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 3799999999999999999999 7 999999999999998763
No 176
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.51 E-value=6.8e-05 Score=82.20 Aligned_cols=36 Identities=31% Similarity=0.489 Sum_probs=33.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~G 83 (737)
+||+|||||++||+||+.|++.|+ +|+|+|+++.++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~ 39 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP 39 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC
Confidence 789999999999999999999999 899999998665
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.51 E-value=4.9e-05 Score=86.37 Aligned_cols=39 Identities=41% Similarity=0.624 Sum_probs=34.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcceee
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (737)
..+||+|||||++||+||++|++.|++|+|+|+ ++||.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~ 249 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQV 249 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGG
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcc
Confidence 358999999999999999999999999999986 567643
No 178
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.51 E-value=5.1e-05 Score=83.95 Aligned_cols=38 Identities=32% Similarity=0.506 Sum_probs=35.3
Q ss_pred CcEEEECccHHHHHHHHHHHH--CCCcEEEEccCCCccee
Q 004684 48 LRVLVIGAGLAGLAAARQLMR--LGFRVTVLEGRKRAGGR 85 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak--~G~~V~VLEa~~r~GGr 85 (737)
+||+|||||++||+||++|++ .|++|+|+|+++.+++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 799999999999999999999 88999999999988753
No 179
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.51 E-value=5.7e-05 Score=84.04 Aligned_cols=37 Identities=35% Similarity=0.602 Sum_probs=33.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
.+||+|||||++||+||+.|++. |++|+|+|+.+.++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 38999999999999999999998 78999999988665
No 180
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.51 E-value=5.6e-05 Score=87.13 Aligned_cols=39 Identities=21% Similarity=0.298 Sum_probs=35.7
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
...+||+|||||++||+||+.|++. |++|+|+|+++.+|
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 3458999999999999999999998 89999999999876
No 181
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.51 E-value=4.8e-05 Score=88.71 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHC------CCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL------GFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~------G~~V~VLEa~~r~G 83 (737)
++||+|||||+|||+||+.|+++ |.+|+|||+....+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 48999999999999999999998 99999999976543
No 182
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.50 E-value=4.3e-05 Score=85.62 Aligned_cols=36 Identities=36% Similarity=0.418 Sum_probs=31.2
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
+||+|||||++||+||+.|++. |++|+|+|+++.++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 7999999999999999999998 89999999998765
No 183
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.50 E-value=5.8e-05 Score=83.00 Aligned_cols=38 Identities=32% Similarity=0.434 Sum_probs=34.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCc--EEEEccCCCcce
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFR--VTVLEGRKRAGG 84 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~--V~VLEa~~r~GG 84 (737)
++||+|||||++||+||+.|++.|++ |+|+|+.+.++.
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y 48 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPY 48 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCB
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCc
Confidence 48999999999999999999999987 999999987653
No 184
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.48 E-value=5.2e-05 Score=83.12 Aligned_cols=37 Identities=30% Similarity=0.307 Sum_probs=34.2
Q ss_pred CcEEEECccHHHHHHHHHHHH---CCCcEEEEccCCCcce
Q 004684 48 LRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRKRAGG 84 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~r~GG 84 (737)
+||+|||||++||+||+.|++ .|++|+|+|+++.+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~ 41 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYF 41 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCcee
Confidence 689999999999999999999 8999999999986654
No 185
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.47 E-value=5.1e-05 Score=84.85 Aligned_cols=40 Identities=28% Similarity=0.399 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC--CcEEEEccCCCcceee
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKRAGGRV 86 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r~GGr~ 86 (737)
.+||+|||||++|++||..|++.| ++|+|||+.+.+||++
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 389999999999999999999998 9999999999999865
No 186
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.42 E-value=7.9e-05 Score=83.71 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=33.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
.+||+|||||++|++||+.|++. |.+|+|+|+.+.+|
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 37999999999999999999996 89999999987654
No 187
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.41 E-value=8.5e-05 Score=85.82 Aligned_cols=33 Identities=33% Similarity=0.583 Sum_probs=31.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEcc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (737)
..+||+|||||+|||+||.+|++.|++|+|+|+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 358999999999999999999999999999998
No 188
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.39 E-value=7.2e-05 Score=85.23 Aligned_cols=34 Identities=32% Similarity=0.494 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+|||+|||||.+|++||.++++.|.+|+|+|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4899999999999999999999999999999743
No 189
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.35 E-value=0.00011 Score=81.92 Aligned_cols=36 Identities=28% Similarity=0.339 Sum_probs=33.3
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
+||+|||||++|++||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 5899999999999999999998 99999999987654
No 190
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.34 E-value=0.00011 Score=85.94 Aligned_cols=36 Identities=39% Similarity=0.590 Sum_probs=33.2
Q ss_pred CCcEEEECccHHHHHHHHHHHH-----CCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR-----LGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-----~G~~V~VLEa~~r~ 82 (737)
.+||+|||||++||++|..|++ .|++|+|+|+.+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 3899999999999999999999 99999999997643
No 191
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.33 E-value=9.2e-05 Score=83.93 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=31.9
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa~~r 81 (737)
+||+||||||.||+..|.+|++ .|++|+|||+..+
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5999999999999999999998 6799999999643
No 192
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.32 E-value=0.00012 Score=81.42 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=33.2
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
+||+|||||++||+||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 5899999999999999999998 99999999987654
No 193
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.32 E-value=0.00057 Score=74.18 Aligned_cols=41 Identities=17% Similarity=0.308 Sum_probs=35.8
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~ 295 (737)
.+++|+++++|++|+.+++++.|++ +|+++.+|.||+|+..
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 3678999999999998877788877 7889999999999874
No 194
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.32 E-value=0.00014 Score=83.08 Aligned_cols=37 Identities=30% Similarity=0.472 Sum_probs=33.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+||||||||.+|+++|++|+++|++|+|||+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 3499999999999999999999999999999997643
No 195
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.30 E-value=0.00017 Score=79.23 Aligned_cols=37 Identities=24% Similarity=0.472 Sum_probs=34.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCc--EEEEccCCCcce
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFR--VTVLEGRKRAGG 84 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~--V~VLEa~~r~GG 84 (737)
++|+|||||++||+||+.|++.|++ |+|+|+.+.++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y 41 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY 41 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc
Confidence 6899999999999999999999987 999999987663
No 196
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.27 E-value=0.00014 Score=83.18 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=33.9
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
+||+|||||++||+||+.|++. |++|+|+|+++.+|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 6899999999999999999998 78999999998876
No 197
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.26 E-value=0.00013 Score=82.13 Aligned_cols=38 Identities=32% Similarity=0.458 Sum_probs=34.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCCcc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (737)
..+||+|||||+||++||+.|.+. |.+|+|+|+++.++
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 348999999999999999999887 88999999998765
No 198
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.24 E-value=0.00016 Score=78.74 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=34.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
++++|+|||||+||++||..|...|.+|+|+|+++.++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 45899999999999999999977789999999987654
No 199
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.23 E-value=0.0002 Score=78.63 Aligned_cols=36 Identities=33% Similarity=0.578 Sum_probs=32.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCc--EEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFR--VTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~--V~VLEa~~r~ 82 (737)
++||+|||||++|++||+.|++.|++ |+|+|+.+.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 48999999999999999999999984 9999997644
No 200
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.23 E-value=0.00023 Score=78.72 Aligned_cols=37 Identities=24% Similarity=0.419 Sum_probs=33.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~G 83 (737)
.+||+|||||++||+||..|++.|+ +|+|+|+.+.++
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 3899999999999999999999998 799999987543
No 201
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.23 E-value=0.00023 Score=77.38 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=31.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC--CcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~ 80 (737)
++||+|||||++||+||..|++.| .+|+|+|+++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 389999999999999999999999 4699999865
No 202
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.19 E-value=0.00097 Score=74.12 Aligned_cols=42 Identities=26% Similarity=0.312 Sum_probs=36.4
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~ 296 (737)
.+++|+++++|++|+.+++++.+.+ +++++.+|.||+|+...
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 4788999999999998888888877 78899999999998743
No 203
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.18 E-value=0.00018 Score=81.03 Aligned_cols=37 Identities=19% Similarity=0.336 Sum_probs=33.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC---CcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG---FRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G---~~V~VLEa~~r~G 83 (737)
++||+|||||++|++||..|++.| .+|+|+|+++.+|
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 489999999999999999999988 9999999987654
No 204
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.14 E-value=0.00015 Score=82.53 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=33.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
.+|+||||||.||+++|.+|++ |.+|+|||+....+
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 4999999999999999999999 99999999976654
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.11 E-value=0.00024 Score=76.91 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..||+|||||+||++||..|++.| +|+|+|+.+.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 379999999999999999999999 9999999764
No 206
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.09 E-value=0.0014 Score=73.03 Aligned_cols=35 Identities=40% Similarity=0.547 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEI 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 68999999999999999999999999999997654
No 207
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.06 E-value=0.00026 Score=78.36 Aligned_cols=34 Identities=29% Similarity=0.555 Sum_probs=32.2
Q ss_pred CcEEEECccHHHHHHHHHHHH---CCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~r 81 (737)
+||+|||||++||+||+.|++ .|++|+|+|+++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 799999999999999999999 8999999999874
No 208
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.04 E-value=0.00032 Score=77.71 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=31.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~ 82 (737)
++|+|||||+||++||..|++.|. +|+|+|+++.+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 479999999999999999999884 69999997654
No 209
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.04 E-value=0.00031 Score=80.65 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=32.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r 81 (737)
.+|+||||||.||+++|.+|++.| .+|+||||...
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 499999999999999999999998 79999999764
No 210
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.02 E-value=0.0022 Score=71.20 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=32.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 368999999999999999999999999999997643
No 211
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.01 E-value=0.00038 Score=78.62 Aligned_cols=37 Identities=24% Similarity=0.290 Sum_probs=34.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
.+||+|||||.+|+++|++|++.|++|+|+|+..+.+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4899999999999999999999999999999987655
No 212
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.97 E-value=0.00041 Score=75.61 Aligned_cols=34 Identities=29% Similarity=0.493 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCC--CcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r 81 (737)
++|+|||||.||++||.+|++.| .+|+|+|+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 78999999999999999999876 58999999764
No 213
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.96 E-value=0.0024 Score=71.23 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=35.4
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCe-EEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQ-VFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~-~i~AD~VI~AvP~ 295 (737)
.+++|+++++|++|+.+++++.|++ +|+ ++.+|.||+|+..
T Consensus 220 ~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 220 QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence 4788999999999998777777777 787 8999999999874
No 214
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.96 E-value=0.00056 Score=77.36 Aligned_cols=37 Identities=30% Similarity=0.496 Sum_probs=34.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|++|||||.+|+++|++|++.|.+|+|+|+....
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4599999999999999999999999999999997643
No 215
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.93 E-value=0.00041 Score=78.31 Aligned_cols=36 Identities=19% Similarity=0.462 Sum_probs=33.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
++++|||||||+||++||..|.+.+++|+|+|+++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 347999999999999999999999999999999864
No 216
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.90 E-value=0.00038 Score=79.91 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=32.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHC-CCcEEEEccCC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRK 80 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~ 80 (737)
+.+|+||||||.||+++|.+|++. |.+|+||||..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 359999999999999999999985 89999999976
No 217
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.87 E-value=0.00059 Score=75.37 Aligned_cols=34 Identities=35% Similarity=0.602 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCC--CcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r 81 (737)
++|+|||||+|||+||++|++.+ ++|+|+|+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 68999999999999999999876 78999999874
No 218
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.85 E-value=0.0023 Score=70.09 Aligned_cols=42 Identities=21% Similarity=0.114 Sum_probs=35.0
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~ 296 (737)
.|++|++++.|++|..++....|++ +|+++.||.||++++..
T Consensus 198 ~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 198 LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 4789999999999988664446777 88999999999999753
No 219
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.85 E-value=0.0033 Score=68.90 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=35.1
Q ss_pred HcCCcccCceEEEEEecCCcE-EEEE-CCeEEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDGV-QVLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V-~V~~-~G~~i~AD~VI~AvP~ 295 (737)
.|++|++++.|++|..+++++ .|++ +|+++.||.||+|+..
T Consensus 207 ~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 207 HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 378899999999999887776 4666 8889999999999974
No 220
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.81 E-value=0.0043 Score=69.28 Aligned_cols=37 Identities=38% Similarity=0.591 Sum_probs=33.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 219 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG 219 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc
Confidence 3689999999999999999999999999999987543
No 221
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.79 E-value=0.0047 Score=69.38 Aligned_cols=36 Identities=33% Similarity=0.470 Sum_probs=33.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 378999999999999999999999999999998754
No 222
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.72 E-value=0.0048 Score=68.06 Aligned_cols=34 Identities=35% Similarity=0.594 Sum_probs=32.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 7899999999999999999999999999998664
No 223
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.0048 Score=69.01 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=32.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 68999999999999999999999999999997643
No 224
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.70 E-value=0.001 Score=76.56 Aligned_cols=37 Identities=27% Similarity=0.418 Sum_probs=33.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHH-CCCcEEEEccCCCc
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMR-LGFRVTVLEGRKRA 82 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa~~r~ 82 (737)
..+|+||||||.+|+++|++|++ .|.+|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 45999999999999999999999 79999999997643
No 225
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.70 E-value=0.0051 Score=69.14 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=36.1
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~ 296 (737)
.|++|+++++|++|+.+++++.|.. +|+++.+|.||+|+...
T Consensus 236 ~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 236 RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 3788999999999998877788777 78899999999999743
No 226
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.69 E-value=0.00053 Score=78.47 Aligned_cols=36 Identities=33% Similarity=0.403 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa~~r~ 82 (737)
.+|+||||||.||+++|.+|++ .|.+|+|||+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3899999999999999999999 69999999997654
No 227
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.68 E-value=0.0048 Score=67.28 Aligned_cols=40 Identities=20% Similarity=0.300 Sum_probs=34.6
Q ss_pred cCCcccCceEEEEEecCCcEE-EEE-CCeEEEecEEEEccCh
Q 004684 256 NVPILYEKTVHTIRYGSDGVQ-VLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 256 gl~I~lnt~V~~I~~~~~~V~-V~~-~G~~i~AD~VI~AvP~ 295 (737)
|++|+++++|++|..+++++. |++ +|+++.||.||+|+..
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 788999999999998877764 666 8889999999999974
No 228
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.64 E-value=0.00086 Score=76.53 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=33.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHC-CCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~r~ 82 (737)
.+|++|||||.+|+++|++|++. |.+|+|||+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 49999999999999999999998 8999999998654
No 229
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.61 E-value=0.0051 Score=68.18 Aligned_cols=41 Identities=22% Similarity=0.277 Sum_probs=34.7
Q ss_pred HcCCcccCceEEEEEecCCcEEEEECCeEEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~~G~~i~AD~VI~AvP~ 295 (737)
.|++|+++++|++|+.+++++.|.++++++.+|.||+|++.
T Consensus 202 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 202 QAVIFHFEETVLGIEETANGIVLETSEQEISCDSGIFALNL 242 (452)
T ss_dssp TTEEEEETCCEEEEEECSSCEEEEESSCEEEESEEEECSCC
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEECCCEEEeCEEEECcCC
Confidence 46789999999999988888877774448999999999984
No 230
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.60 E-value=0.0077 Score=67.03 Aligned_cols=41 Identities=10% Similarity=0.102 Sum_probs=35.2
Q ss_pred HcCCcccCceEEEEEecCCcEEEEECCeEEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~~G~~i~AD~VI~AvP~ 295 (737)
.|++|+++++|++|+.+++.+.|.++++++.+|.||+|+..
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTTHGELRADKLLVATGR 269 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEETTEEEEESEEEECSCE
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEECCcEEEcCEEEECCCC
Confidence 47889999999999987776777777789999999999975
No 231
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.59 E-value=0.006 Score=68.31 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=36.6
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~ 295 (737)
.|++|+++++|++|+.+++++.|++ +|+++.+|.||+|++.
T Consensus 245 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 4789999999999999888888888 7889999999999984
No 232
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.58 E-value=0.0053 Score=68.06 Aligned_cols=35 Identities=23% Similarity=0.514 Sum_probs=32.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 36899999999999999999999999999999764
No 233
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.55 E-value=0.0063 Score=68.90 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=32.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 78999999999999999999999999999997643
No 234
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.53 E-value=0.0064 Score=67.79 Aligned_cols=41 Identities=12% Similarity=0.215 Sum_probs=35.9
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~ 295 (737)
.|++|+++++|++|+.+++++.|++ +|+++.+|.||+|+..
T Consensus 215 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 215 NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 3788999999999998778887776 8889999999999984
No 235
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.46 E-value=0.0078 Score=67.70 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=32.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 468999999999999999999999999999997653
No 236
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.28 E-value=0.0098 Score=66.83 Aligned_cols=41 Identities=15% Similarity=0.323 Sum_probs=34.5
Q ss_pred HcCCcccCceEEEEEecCCc-EEEEE-CCeEEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDG-VQVLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~-V~V~~-~G~~i~AD~VI~AvP~ 295 (737)
.|++|+++++|++|+.++++ +.|++ +|+++.+|.||+|+..
T Consensus 248 ~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 248 NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp TTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 47889999999999987654 67777 7889999999999874
No 237
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.27 E-value=0.012 Score=67.01 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=31.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.+|+|||||..|+-+|..|++.|.+|+++|+.++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 5899999999999999999999999999999764
No 238
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.26 E-value=0.0091 Score=66.97 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=34.3
Q ss_pred HcCCcccCceEEEEEecCCc-EEEEE-CCeEEEecEEEEccCh
Q 004684 255 ENVPILYEKTVHTIRYGSDG-VQVLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~-V~V~~-~G~~i~AD~VI~AvP~ 295 (737)
.|++|+++++|++|+.++++ +.|++ +|+++.+|.||+|+..
T Consensus 244 ~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 244 NGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp TTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 36789999999999987654 77777 7779999999999974
No 239
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.15 E-value=0.012 Score=65.99 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=35.8
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccChh
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~~ 296 (737)
.|++|++++.|++|..+++.+.|++ +|+++.||.||+|+...
T Consensus 239 ~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 239 EGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp TTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred cCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCC
Confidence 3788999999999988777777777 88899999999999753
No 240
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.12 E-value=0.035 Score=61.41 Aligned_cols=35 Identities=14% Similarity=0.249 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r 81 (737)
..+|+|||||.+|+=+|..|++. |.+|+++++++.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 47899999999999999999999 899999999764
No 241
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=96.09 E-value=0.017 Score=64.40 Aligned_cols=35 Identities=43% Similarity=0.555 Sum_probs=32.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 214 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 36899999999999999999999999999999764
No 242
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.81 E-value=0.026 Score=62.70 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=32.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||||..|+-.|..|++.|.+|+++|+.++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 46899999999999999999999999999999763
No 243
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.56 E-value=0.064 Score=60.86 Aligned_cols=40 Identities=15% Similarity=-0.016 Sum_probs=35.9
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccC
Q 004684 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVP 294 (737)
Q Consensus 255 ~gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP 294 (737)
+++.+++++.|++++..++++.|.. ++.++.+|.|++|+.
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 4778999999999999999998888 788899999999986
No 244
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.27 E-value=0.013 Score=64.71 Aligned_cols=37 Identities=35% Similarity=0.488 Sum_probs=34.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
.++|+|||||.+|+.+|..|++.|.+|+|+|+.+++.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 185 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPL 185 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccc
Confidence 4899999999999999999999999999999987653
No 245
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.12 E-value=0.013 Score=63.56 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=33.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 689999999999999999999999999999987654
No 246
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.07 E-value=0.015 Score=60.62 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=32.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 68999999999999999999999999999997643
No 247
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.60 E-value=0.023 Score=63.03 Aligned_cols=36 Identities=33% Similarity=0.588 Sum_probs=33.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 368999999999999999999999999999998754
No 248
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.55 E-value=0.049 Score=49.84 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+.+|+|||+|-.|...|..|.+.|++|+++|.+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3789999999999999999999999999999864
No 249
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.42 E-value=0.039 Score=51.37 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=31.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|||+|..|+..|..|.+.|++|++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 789999999999999999999999999999864
No 250
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.41 E-value=0.031 Score=61.81 Aligned_cols=36 Identities=31% Similarity=0.548 Sum_probs=33.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 378999999999999999999999999999997754
No 251
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.36 E-value=0.039 Score=49.77 Aligned_cols=33 Identities=21% Similarity=0.473 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 789999999999999999999999999999853
No 252
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.34 E-value=0.031 Score=60.08 Aligned_cols=35 Identities=26% Similarity=0.470 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 68999999999999999999999999999998754
No 253
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.17 E-value=0.032 Score=57.82 Aligned_cols=34 Identities=29% Similarity=0.508 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999754
No 254
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.91 E-value=0.045 Score=59.68 Aligned_cols=36 Identities=31% Similarity=0.560 Sum_probs=33.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 378999999999999999999999999999998764
No 255
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.82 E-value=0.064 Score=48.84 Aligned_cols=33 Identities=30% Similarity=0.486 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|+|+|..|...|..|.+.|++|+++|.+.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 689999999999999999999999999999854
No 256
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.51 E-value=0.046 Score=61.00 Aligned_cols=37 Identities=32% Similarity=0.543 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 222 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG 222 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh
Confidence 4789999999999999999999999999999976543
No 257
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.49 E-value=0.048 Score=60.21 Aligned_cols=35 Identities=29% Similarity=0.517 Sum_probs=32.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
++|.|||.|.+|+++|..|++.|++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 68999999999999999999999999999987654
No 258
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.38 E-value=0.055 Score=59.94 Aligned_cols=34 Identities=47% Similarity=0.623 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|.+|+++|..|.+.|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3789999999999999999999999999999864
No 259
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.37 E-value=0.068 Score=46.54 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-CcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~ 80 (737)
++|+|+|+|..|...|..|.+.| ++|++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 68999999999999999999999 8999999853
No 260
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.35 E-value=0.067 Score=59.79 Aligned_cols=36 Identities=31% Similarity=0.439 Sum_probs=33.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 378999999999999999999999999999997754
No 261
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.21 E-value=0.067 Score=59.44 Aligned_cols=36 Identities=36% Similarity=0.505 Sum_probs=33.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 214 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG 214 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC
Confidence 689999999999999999999999999999987543
No 262
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.19 E-value=0.06 Score=60.01 Aligned_cols=36 Identities=31% Similarity=0.460 Sum_probs=33.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGL 220 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 368999999999999999999999999999997754
No 263
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.13 E-value=0.087 Score=54.87 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.+|+|||+|..|.+.|..|+++|++|++++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 67999999999999999999999999999985
No 264
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.07 E-value=0.073 Score=58.97 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=33.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 368999999999999999999999999999997754
No 265
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.97 E-value=0.077 Score=56.30 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.+|+|||+|.+|+-.|..|++.|.+|+++|+.++
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 5899999999999999999999999999999764
No 266
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.96 E-value=0.11 Score=48.03 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 689999999999999999999999999999863
No 267
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=92.82 E-value=0.079 Score=58.34 Aligned_cols=35 Identities=29% Similarity=0.485 Sum_probs=32.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 68999999999999999999999999999998754
No 268
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.74 E-value=0.095 Score=57.74 Aligned_cols=35 Identities=29% Similarity=0.469 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 68999999999999999999999999999997754
No 269
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=92.60 E-value=0.096 Score=54.14 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=32.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-.|..|++.|.+|++++++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 37899999999999999999999999999998764
No 270
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.57 E-value=0.11 Score=47.00 Aligned_cols=32 Identities=28% Similarity=0.416 Sum_probs=30.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.+|+|+|+|..|...|..|.+.|++|++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999875
No 271
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.56 E-value=0.1 Score=54.89 Aligned_cols=33 Identities=33% Similarity=0.472 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|||||..|-.-|..++.+|++|+|+|.+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 689999999999999999999999999999753
No 272
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.48 E-value=0.069 Score=59.20 Aligned_cols=36 Identities=36% Similarity=0.469 Sum_probs=33.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 368999999999999999999999999999998754
No 273
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.35 E-value=0.11 Score=49.53 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHC-CCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~ 80 (737)
..+|+|||+|..|...|..|.+. |++|+++|.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 36899999999999999999999 99999999864
No 274
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.15 E-value=0.11 Score=57.45 Aligned_cols=36 Identities=39% Similarity=0.522 Sum_probs=33.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC 209 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc
Confidence 368999999999999999999999999999998754
No 275
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.98 E-value=0.12 Score=53.45 Aligned_cols=34 Identities=41% Similarity=0.428 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 6899999999999999999999999999998764
No 276
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.84 E-value=0.14 Score=50.44 Aligned_cols=33 Identities=18% Similarity=0.471 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|-.|...|..|.+.|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999854
No 277
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.74 E-value=0.13 Score=57.04 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=32.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||||.+|+=.|..|++.|.+|+|++++++
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 46899999999999999999999999999998764
No 278
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.66 E-value=0.12 Score=53.90 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=32.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-.|..|++.|.+|+|++++++
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 36899999999999999999999999999998754
No 279
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.48 E-value=0.17 Score=53.47 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
.++|+|||||-.|.+.|..|++.|+ +|+++|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4799999999999999999999998 999999864
No 280
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.45 E-value=0.13 Score=57.31 Aligned_cols=36 Identities=33% Similarity=0.491 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 368999999999999999999999999999997754
No 281
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.42 E-value=0.13 Score=58.31 Aligned_cols=35 Identities=29% Similarity=0.237 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.++|+|||+|.+|+-.|..|++.|.+|+|++++++
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 47899999999999999999999999999999875
No 282
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.39 E-value=0.14 Score=53.71 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=32.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-.|..|++.|.+|++++++++
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 37899999999999999999999999999998754
No 283
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.37 E-value=0.16 Score=56.51 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 368999999999999999999999999999997653
No 284
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=91.33 E-value=0.17 Score=56.14 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 368999999999999999999999999999997754
No 285
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=91.28 E-value=0.4 Score=53.03 Aligned_cols=39 Identities=21% Similarity=0.193 Sum_probs=33.8
Q ss_pred CcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhhhh
Q 004684 454 GRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARAL 494 (737)
Q Consensus 454 ~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~ 494 (737)
++||.+||.... +..+.-|+..|..||..|...+.++.+
T Consensus 410 ~~VfA~GD~~~g--~~~v~~A~~~G~~aA~~i~~~L~~~~~ 448 (456)
T 2vdc_G 410 DGVFAAGDIVRG--ASLVVWAIRDGRDAAEGIHAYAKAKAE 448 (456)
T ss_dssp TTEEECGGGGSS--CCSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeccccCC--chHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 789999999863 467889999999999999999977664
No 286
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=91.25 E-value=0.15 Score=53.17 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=31.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 6899999999999999999999999999998653
No 287
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=91.25 E-value=0.14 Score=52.94 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 6899999999999999999999999999998753
No 288
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.23 E-value=0.17 Score=52.18 Aligned_cols=33 Identities=33% Similarity=0.381 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|||+|.-|...|..|+++|++|++++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 689999999999999999999999999998753
No 289
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.14 E-value=0.19 Score=54.45 Aligned_cols=34 Identities=38% Similarity=0.575 Sum_probs=31.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3789999999999999999999999999999864
No 290
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.03 E-value=0.13 Score=52.85 Aligned_cols=34 Identities=32% Similarity=0.538 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+.|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4889999999999999999999999999998643
No 291
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.00 E-value=0.4 Score=52.90 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=32.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
+-.+|+|||+|..|..-|..|+++|++|+++|.+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999998653
No 292
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.93 E-value=0.2 Score=52.80 Aligned_cols=33 Identities=33% Similarity=0.472 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|||+|.-|.+-|..|+++|++|++++.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999853
No 293
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.86 E-value=0.14 Score=53.41 Aligned_cols=35 Identities=29% Similarity=0.454 Sum_probs=32.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 36899999999999999999999999999998764
No 294
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=90.84 E-value=0.15 Score=57.89 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.++|+|||+|.+|+-+|..|++.|.+|+|++++++
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 47899999999999999999999999999999875
No 295
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.82 E-value=0.19 Score=49.98 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+|||||-.|...|..|.+.|.+|+|++...
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4899999999999999999999999999998643
No 296
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.79 E-value=0.18 Score=55.49 Aligned_cols=36 Identities=17% Similarity=0.072 Sum_probs=32.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCc-EEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFR-VTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~-V~VLEa~~r~ 82 (737)
..+|+|||||.+|+=.|..|++.|.+ |+|+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 47899999999999999999999999 9999997643
No 297
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=90.78 E-value=0.14 Score=58.01 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.++|+|||+|.+|+-.|..|++.|.+|+|++++++
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 47899999999999999999999999999999875
No 298
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=90.74 E-value=0.17 Score=52.63 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 37899999999999999999999999999998764
No 299
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.69 E-value=0.21 Score=52.28 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (737)
.++|+|||||-.|.+.|+.|++.|+ +|++++.+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4789999999999999999999999 999999863
No 300
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.67 E-value=0.22 Score=50.92 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||+|..|.+.|..|+++|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 369999999999999999999999999999865
No 301
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.66 E-value=0.21 Score=52.40 Aligned_cols=33 Identities=33% Similarity=0.481 Sum_probs=31.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|.-|.+-|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 302
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.65 E-value=0.21 Score=55.66 Aligned_cols=34 Identities=26% Similarity=0.488 Sum_probs=31.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|+|||+|.-|+..|..|+++|++|++++.+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4899999999999999999999999999999753
No 303
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.46 E-value=0.26 Score=48.33 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=31.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
++|.|||+|..|.+.|..|+++|++|++++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 7899999999999999999999999999998754
No 304
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.32 E-value=0.23 Score=51.57 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=30.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..++|.|||+|..|-.-|..|+ +|++|++++.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3589999999999999999999 999999999854
No 305
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.25 E-value=0.23 Score=52.30 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.5
Q ss_pred CcEEEECccHHHHH-HHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLA-AARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLs-AA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||.|-+|++ +|..|.+.|++|++.|.++
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 68999999999997 7899999999999999865
No 306
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.25 E-value=0.2 Score=53.83 Aligned_cols=34 Identities=38% Similarity=0.516 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3789999999999999999999999999999863
No 307
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.21 E-value=0.18 Score=52.38 Aligned_cols=34 Identities=32% Similarity=0.375 Sum_probs=31.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 6899999999999999999999999999998653
No 308
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=90.21 E-value=0.24 Score=56.55 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (737)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQV 222 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 368999999999999999999999999999997654
No 309
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.01 E-value=0.22 Score=52.07 Aligned_cols=33 Identities=39% Similarity=0.517 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|--|.+-|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 689999999999999999999999999999864
No 310
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.89 E-value=0.29 Score=51.15 Aligned_cols=35 Identities=31% Similarity=0.518 Sum_probs=32.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+.++|.|||.|..|..-|..|+++|++|++++++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34789999999999999999999999999998864
No 311
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.73 E-value=0.27 Score=56.29 Aligned_cols=32 Identities=41% Similarity=0.420 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 57999999999999999999999999999975
No 312
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.59 E-value=0.27 Score=50.66 Aligned_cols=35 Identities=29% Similarity=0.351 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.++
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 36899999999999999999999999999998764
No 313
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.54 E-value=0.22 Score=56.14 Aligned_cols=35 Identities=40% Similarity=0.405 Sum_probs=32.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 36899999999999999999999999999998654
No 314
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=89.51 E-value=0.21 Score=52.80 Aligned_cols=35 Identities=23% Similarity=0.335 Sum_probs=32.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE 197 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC
Confidence 36899999999999999999999999999998764
No 315
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.49 E-value=0.32 Score=51.40 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|||+|.-|.+.|..|+++|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 78999999999999999999999999999873
No 316
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.47 E-value=0.35 Score=53.57 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+|||+|..|...|..|+++|++|+++|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999998753
No 317
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.42 E-value=0.3 Score=50.58 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|||+|..|.+.|..|+++|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 68999999999999999999999999999874
No 318
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=89.36 E-value=0.31 Score=50.05 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 36899999999999999999999999999998764
No 319
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.25 E-value=0.29 Score=54.03 Aligned_cols=33 Identities=30% Similarity=0.571 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|..|+..|..|+++|++|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 689999999999999999999999999999864
No 320
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.25 E-value=0.28 Score=52.73 Aligned_cols=33 Identities=36% Similarity=0.622 Sum_probs=31.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
..+|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 3799999999999999999999999 89999986
No 321
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.85 E-value=0.34 Score=50.76 Aligned_cols=32 Identities=31% Similarity=0.544 Sum_probs=29.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++|+|||+|--|.+.|..|+++|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 378999999999999999999999999999 64
No 322
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.84 E-value=0.33 Score=53.97 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=32.1
Q ss_pred CcEEEECccHHHHHHHHHHHHC-CC-cEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL-GF-RVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~-G~-~V~VLEa~~r 81 (737)
++|+|||+|.-|+..|..|+++ |+ +|++++.+..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 7899999999999999999999 99 9999998764
No 323
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=88.64 E-value=0.61 Score=50.18 Aligned_cols=39 Identities=33% Similarity=0.530 Sum_probs=34.2
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCC---cEEEEccCC-Cccee
Q 004684 47 KLRVLVIGA-GLAGLAAARQLMRLGF---RVTVLEGRK-RAGGR 85 (737)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~---~V~VLEa~~-r~GGr 85 (737)
..+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 479999999 9999999999999998 999999865 44665
No 324
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.62 E-value=0.4 Score=48.16 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||+|..|.+-|..|+++|++|++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4899999999999999999999999999998753
No 325
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=88.58 E-value=0.36 Score=50.61 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
.++|+|||||..|.+.|..|++.|+ +|++++.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3789999999999999999999998 999999864
No 326
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=88.46 E-value=0.38 Score=49.50 Aligned_cols=33 Identities=30% Similarity=0.477 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 689999999999999999999999999998864
No 327
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.40 E-value=0.43 Score=50.35 Aligned_cols=33 Identities=24% Similarity=0.290 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
.+|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 689999999999999999999999 999999864
No 328
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.36 E-value=0.35 Score=51.87 Aligned_cols=33 Identities=30% Similarity=0.586 Sum_probs=30.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
..+|+|+|||-+|..+|..|...|. +|+|++++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3899999999999999999999998 79999986
No 329
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.34 E-value=0.3 Score=50.55 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|--|.+-|..|+++|++|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 689999999999999999999999999999863
No 330
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.33 E-value=0.4 Score=50.75 Aligned_cols=32 Identities=28% Similarity=0.192 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|||+|..|...|..|++.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999999999999999999999999999875
No 331
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.32 E-value=0.41 Score=49.68 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||.|..|..-|..|+++|++|++++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 789999999999999999999999999998753
No 332
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=88.26 E-value=0.43 Score=53.08 Aligned_cols=33 Identities=30% Similarity=0.410 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
..+|+|||||..|+-.|..|++.|.+|+|+|+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 357999999999999999999999999999974
No 333
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.22 E-value=0.42 Score=51.01 Aligned_cols=33 Identities=33% Similarity=0.373 Sum_probs=31.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++|+|||+|.-|.+.|..|+++|++|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 478999999999999999999999999999885
No 334
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.17 E-value=0.5 Score=49.50 Aligned_cols=33 Identities=30% Similarity=0.508 Sum_probs=30.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (737)
++|.|||+|..|-+-|..|.+.|+ +|++++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 789999999999999999999999 899998753
No 335
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=88.08 E-value=0.38 Score=52.69 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=30.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|+|||+|.-|+..|..|++ |++|++++.+.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3689999999999999999998 99999999854
No 336
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.04 E-value=0.46 Score=52.32 Aligned_cols=34 Identities=24% Similarity=0.516 Sum_probs=31.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+++|||.|.-|+..|..|+++|++|++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999999999999865
No 337
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=87.99 E-value=8.8 Score=43.53 Aligned_cols=37 Identities=14% Similarity=-0.028 Sum_probs=30.6
Q ss_pred CcEEEecccccccc---CceeeHHHHHHHHHHHHHHHHHh
Q 004684 454 GRLFFAGEATIRRY---PATMHGAFLSGLRETAKMAHCAN 490 (737)
Q Consensus 454 ~~L~fAGd~ts~~~---~g~~eGAi~SG~~AA~~Il~~l~ 490 (737)
+|++++||+.+.-. ..+++-|+.+|..+|+.|...+.
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~ 386 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLT 386 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 79999999987422 23889999999999999988764
No 338
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=87.95 E-value=0.45 Score=53.49 Aligned_cols=32 Identities=34% Similarity=0.465 Sum_probs=30.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.+|+|||||..|+-.|..|++.|.+|+|+|+.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 57999999999999999999999999999974
No 339
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.92 E-value=0.45 Score=51.67 Aligned_cols=33 Identities=45% Similarity=0.623 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 789999999999999999999999999999753
No 340
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.77 E-value=0.45 Score=50.13 Aligned_cols=33 Identities=33% Similarity=0.442 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++|.|||+|.-|.+-|..|+++|++|+++.++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 489999999999999999999999999999874
No 341
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.66 E-value=0.37 Score=52.95 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|..|+..|..|+++|++|++++.+.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999998753
No 342
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.61 E-value=0.46 Score=49.52 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (737)
++|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 479999999999999999999998 899999753
No 343
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=87.56 E-value=0.5 Score=52.65 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|||+|..|..-|..|+++|++|+++|.+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 689999999999999999999999999999753
No 344
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.55 E-value=0.51 Score=50.93 Aligned_cols=34 Identities=44% Similarity=0.562 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3789999999999999999999999999999764
No 345
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.33 E-value=0.22 Score=45.52 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=30.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.+|+|||+|..|...|..|.+.|++|+|++++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 78999999999999999999999999999875
No 346
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=87.22 E-value=0.4 Score=49.62 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=32.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
..+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 37899999999999999999999999999998764
No 347
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.18 E-value=0.54 Score=50.27 Aligned_cols=32 Identities=28% Similarity=0.553 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.+|+|+|+|-+|+.+|..|...|.+|++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 78999999999999999999999999999875
No 348
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=87.14 E-value=0.46 Score=52.59 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHH--------------------HCCC-cEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLM--------------------RLGF-RVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~La--------------------k~G~-~V~VLEa~~r 81 (737)
..+|+|||+|..|+-+|..|+ +.|. +|+|+++++.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 378999999999999999999 5687 6999998754
No 349
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.13 E-value=0.4 Score=49.67 Aligned_cols=34 Identities=29% Similarity=0.293 Sum_probs=31.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|..|..-|..|+++|++|++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999999865
No 350
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.12 E-value=0.47 Score=49.77 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4799999999999999999999999999998753
No 351
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.02 E-value=0.61 Score=49.05 Aligned_cols=33 Identities=18% Similarity=0.428 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
.+|+|||||-.|.+.|+.|+..|+ +|+++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 689999999999999999999998 999999753
No 352
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.87 E-value=0.43 Score=49.97 Aligned_cols=31 Identities=29% Similarity=0.386 Sum_probs=29.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (737)
++|+|||+|..|.+.|..|+++|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999987
No 353
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.80 E-value=0.39 Score=48.84 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=31.8
Q ss_pred CcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhh
Q 004684 454 GRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANAR 492 (737)
Q Consensus 454 ~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~ 492 (737)
++||.|||.+.. +.....|+..|..||..|.+.+...
T Consensus 258 ~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 258 RGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp TTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 789999998873 5678899999999999999988554
No 354
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=86.76 E-value=0.6 Score=47.68 Aligned_cols=32 Identities=38% Similarity=0.491 Sum_probs=30.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
+.|+|+|+|-.|.++|+.|++.|.+|+|+.++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 68999999999999999999999999999875
No 355
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.71 E-value=0.55 Score=48.92 Aligned_cols=32 Identities=41% Similarity=0.536 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|--|.+.|..|+ +|++|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 78999999999999999999 999999999854
No 356
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.56 E-value=0.51 Score=48.84 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||+|..|..-|..|++.|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 689999999999999999999999999998753
No 357
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.42 E-value=0.66 Score=45.56 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|||+|..|.+.|..|++.|++|++++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 68999999999999999999999999999875
No 358
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=86.39 E-value=1.2 Score=52.22 Aligned_cols=35 Identities=29% Similarity=0.365 Sum_probs=32.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+-.+|+|||||..|-.-|+.++.+|++|+++|.+.
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 34789999999999999999999999999999754
No 359
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.29 E-value=0.63 Score=51.64 Aligned_cols=33 Identities=39% Similarity=0.550 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
..+|+|||||..|+-.|..|++.|.+|+|+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 368999999999999999999999999999873
No 360
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=86.18 E-value=0.9 Score=47.22 Aligned_cols=34 Identities=32% Similarity=0.484 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|..|..-|..|+++|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3789999999999999999999999999998753
No 361
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.10 E-value=0.65 Score=50.62 Aligned_cols=34 Identities=29% Similarity=0.520 Sum_probs=31.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+.+|+|||.|-.|...|..|.+.|++|+|+|.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3689999999999999999999999999999864
No 362
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=86.06 E-value=0.45 Score=48.93 Aligned_cols=33 Identities=33% Similarity=0.455 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||.|..|..-|..|+++|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999998864
No 363
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.02 E-value=0.67 Score=49.66 Aligned_cols=33 Identities=30% Similarity=0.559 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|+|+|+|-.|+.+|..|...|.+|++++.+.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999999999999998753
No 364
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.94 E-value=0.65 Score=50.94 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+|||.|.-||..|..|++.|++|+.+|-..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3789999999999999999999999999998753
No 365
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.87 E-value=0.67 Score=49.49 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=31.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|..|..-|..|+++|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3789999999999999999999999999998853
No 366
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=85.73 E-value=13 Score=42.73 Aligned_cols=40 Identities=23% Similarity=0.252 Sum_probs=30.8
Q ss_pred CCcEEEeccccccccC---ceeeHHHHHHHHHHHHHHHHHhhh
Q 004684 453 DGRLFFAGEATIRRYP---ATMHGAFLSGLRETAKMAHCANAR 492 (737)
Q Consensus 453 ~~~L~fAGd~ts~~~~---g~~eGAi~SG~~AA~~Il~~l~~~ 492 (737)
.+|++++||+.+...| .+|+-|++.+...|..|...+.+.
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~ 383 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQ 383 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTS
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCC
Confidence 3899999999985322 378889999988888887766543
No 367
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.68 E-value=0.67 Score=48.54 Aligned_cols=33 Identities=30% Similarity=0.428 Sum_probs=30.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
..+|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3789999999999999999999999 99999985
No 368
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.68 E-value=0.68 Score=48.32 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=29.7
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~ 80 (737)
++|+|||||..|.+.|..|++. |++|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999995 78999999864
No 369
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=85.58 E-value=0.69 Score=49.16 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||||..|..+|+.+.+.|++|++++...
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 689999999999999999999999999999754
No 370
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.56 E-value=0.66 Score=45.07 Aligned_cols=32 Identities=34% Similarity=0.515 Sum_probs=29.2
Q ss_pred CcEEEEC-ccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIG-AGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVG-AGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+||| +|..|...|..|++.|++|++++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3699999 9999999999999999999999874
No 371
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=85.54 E-value=0.79 Score=53.74 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|.|||+|..|..-|..|+++|++|+++|.+.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 3679999999999999999999999999999853
No 372
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.50 E-value=0.6 Score=51.63 Aligned_cols=33 Identities=30% Similarity=0.358 Sum_probs=31.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++|+|||+|-.|+..|..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 378999999999999999999999999999974
No 373
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.48 E-value=0.5 Score=51.31 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=29.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|..|+..|..|++ |++|++++.+.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999998753
No 374
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.28 E-value=0.34 Score=53.74 Aligned_cols=34 Identities=21% Similarity=0.448 Sum_probs=31.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|+|+|+|--|...|..|.+.|++|+|+|...
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3899999999999999999999999999999864
No 375
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.27 E-value=0.63 Score=51.79 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~ 80 (737)
++|+|||+|..|+..|..|+++ |++|++++.+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 6899999999999999999998 79999998753
No 376
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.23 E-value=0.63 Score=48.53 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=29.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+|||+|.+|+-+|..|++.| +|++++++.
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 478999999999999999999998 699998863
No 377
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.08 E-value=0.84 Score=48.01 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
..+|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3799999999999999999999999 999999854
No 378
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=85.00 E-value=0.58 Score=46.14 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=29.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEE-EccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTV-LEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~V-LEa~ 79 (737)
++|.|||+|..|.+.|..|++.|++|++ ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 6899999999999999999999999988 6664
No 379
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.92 E-value=0.88 Score=46.51 Aligned_cols=34 Identities=32% Similarity=0.455 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|+|||+|-+|-++|+.|++.|.+|+|+.++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999998999998764
No 380
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.83 E-value=0.84 Score=47.65 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
++|+|||||-.|.+.|+.|+..|+ +|.++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 689999999999999999999997 999999753
No 381
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=84.78 E-value=0.63 Score=47.59 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|+|+|-+|.+.|+.|++.|.+|+|+.++
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 78999999999999999999999999999875
No 382
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.77 E-value=0.83 Score=49.10 Aligned_cols=33 Identities=48% Similarity=0.560 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
..+|+|||+|..|+.+|..|...|.+|++++.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 378999999999999999999999999999875
No 383
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=84.69 E-value=0.79 Score=47.58 Aligned_cols=32 Identities=28% Similarity=0.345 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
++|+|||+|-+|.++|+.|++.|. +|+|+.++
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 789999999999999999999998 89999875
No 384
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.58 E-value=1 Score=46.87 Aligned_cols=33 Identities=27% Similarity=0.494 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||+|..|..-|..|++.|++|++++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 789999999999999999999999999998753
No 385
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.54 E-value=0.8 Score=48.01 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=30.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
..+|+|||||-.|.+.|+.|+..|. +|.++|-.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3799999999999999999999998 89999975
No 386
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=84.52 E-value=0.53 Score=48.83 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=29.2
Q ss_pred CcEEEECccHHHHHHHHHHHHC-----C-CcEEEEcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL-----G-FRVTVLEG 78 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~-----G-~~V~VLEa 78 (737)
++|.|||+|.-|.+-|..|+++ | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 6899999999999999999999 9 99999976
No 387
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=84.42 E-value=0.69 Score=54.33 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.6
Q ss_pred CCcEEEEC--ccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIG--AGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVG--AGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|+||| ||..|+-+|..|++.|.+|+|+|+.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 36899999 99999999999999999999999876
No 388
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.42 E-value=1 Score=47.39 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=30.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
...+|+|||+|..|.+.|+.|+..|+ +|.++|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 34799999999999999999999997 89999974
No 389
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=84.27 E-value=0.7 Score=48.21 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=30.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.++|.|||.|..|...|..|+++|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3789999999999999999999999 99999985
No 390
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=84.27 E-value=0.88 Score=44.85 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=31.3
Q ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 46 NKLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 46 ~~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+.++|+|.|| |..|...|..|.+.|++|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4578999998 9999999999999999999998754
No 391
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.25 E-value=0.76 Score=46.38 Aligned_cols=32 Identities=38% Similarity=0.517 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.+|+|||+|-.|..+|..|++.|+ +++|++..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 789999999999999999999998 79999974
No 392
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.24 E-value=0.71 Score=48.39 Aligned_cols=32 Identities=22% Similarity=0.499 Sum_probs=29.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
++|+|||+|-.|.+.|..|++.|+ +|++++..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 479999999999999999999999 99999975
No 393
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.12 E-value=0.73 Score=48.26 Aligned_cols=33 Identities=24% Similarity=0.173 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-CcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~ 80 (737)
++|.|||.|..|.+.|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 68999999999999999999999 9999999853
No 394
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.04 E-value=0.91 Score=46.20 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=29.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|.|||+|..|.+.|..|.+.|++|++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999864
No 395
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.01 E-value=0.91 Score=53.12 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
-.+|.|||+|..|..-|..|+++|++|+++|.+.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999999853
No 396
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=83.84 E-value=0.79 Score=46.17 Aligned_cols=32 Identities=25% Similarity=0.487 Sum_probs=29.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-CcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~ 79 (737)
++|.|||+|..|.+-|..|++.| ++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999874
No 397
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.82 E-value=0.97 Score=46.84 Aligned_cols=34 Identities=32% Similarity=0.433 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3789999999999999999999999999999753
No 398
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=83.73 E-value=0.93 Score=47.71 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
..+|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4789999999999999999999997 89999974
No 399
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=83.58 E-value=0.47 Score=57.58 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=33.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 689999999999999999999999999999988754
No 400
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.46 E-value=0.9 Score=46.65 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||+|..|..-|..|.+.|++|++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999998753
No 401
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.32 E-value=1.1 Score=46.36 Aligned_cols=33 Identities=33% Similarity=0.509 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999999999999999864
No 402
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=83.25 E-value=0.79 Score=50.77 Aligned_cols=33 Identities=27% Similarity=0.468 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~ 80 (737)
++|+|||+|..|+..|..|+++ |++|++++.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 6899999999999999999999 89999998753
No 403
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=83.19 E-value=0.55 Score=50.07 Aligned_cols=31 Identities=29% Similarity=0.289 Sum_probs=29.5
Q ss_pred cEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 49 RVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
+|+|||+|..|.+-|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 404
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=83.01 E-value=1 Score=46.58 Aligned_cols=33 Identities=24% Similarity=0.490 Sum_probs=30.4
Q ss_pred CcEEEEC-ccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIG-AGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVG-AGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|.||| +|..|.+-|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 5799999 99999999999999999999998753
No 405
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=82.94 E-value=1.2 Score=46.83 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
.+|+|||+|..|.+.|+.|+..|+ +|.++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 789999999999999999999988 999999864
No 406
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=82.82 E-value=0.8 Score=46.88 Aligned_cols=32 Identities=31% Similarity=0.387 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|||+|-.|-+.|+.|.+.|++|+|++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 68999999999999999999999999999875
No 407
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=82.79 E-value=0.92 Score=46.64 Aligned_cols=32 Identities=25% Similarity=0.586 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|||+|..|...|..|.+.|++|++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999875
No 408
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=82.65 E-value=0.85 Score=51.45 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=32.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.++|+|||+|.+|+-.|..|++.|.+|+|+++++.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 47899999999999999999999999999998653
No 409
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=82.58 E-value=0.95 Score=49.93 Aligned_cols=36 Identities=33% Similarity=0.462 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--------------------CC-cEEEEccCCCc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRL--------------------GF-RVTVLEGRKRA 82 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--------------------G~-~V~VLEa~~r~ 82 (737)
..+|+|||+|.+|+-+|..|++. |. +|+|+++++.+
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 37899999999999999999974 64 89999987643
No 410
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=82.57 E-value=0.98 Score=46.49 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=30.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++|.|||+|..|..-|..|++.|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 378999999999999999999999999999875
No 411
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=82.52 E-value=0.91 Score=47.25 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCC--CcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~ 80 (737)
++|+|||+|-.|.+.|..|++.| .+|++++.+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 57999999999999999999999 6899999853
No 412
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=82.19 E-value=0.98 Score=46.81 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (737)
++|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999998 899999753
No 413
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=82.19 E-value=1.1 Score=45.79 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=29.9
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|.|||+ |..|.+.|..|.+.|++|++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 68999999 999999999999999999999874
No 414
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.17 E-value=1.3 Score=42.77 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=29.7
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 46999996 9999999999999999999998753
No 415
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=82.01 E-value=1 Score=54.93 Aligned_cols=33 Identities=30% Similarity=0.405 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
.+|+|||||..|+-+|..|.+.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 589999999999999999999997 899999876
No 416
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=82.00 E-value=1.2 Score=45.29 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=29.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
++|.|||+|..|.+.|..|.+.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 89988874
No 417
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=81.99 E-value=1.2 Score=49.44 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=31.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||.|..|..-|..|+++|++|++++++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 418
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=81.97 E-value=1.1 Score=46.73 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (737)
.+|+|||||..|.+.|+.|+..|+ +|.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 789999999999999999999998 899999865
No 419
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=81.96 E-value=1.2 Score=49.64 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=31.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..+|.|||+|..|..-|..|+++|++|++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3789999999999999999999999999999864
No 420
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=81.84 E-value=0.95 Score=52.75 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=33.3
Q ss_pred CCcEEEEC--ccHHHHHHHHHHHHCCCcEEEEccCCCcc
Q 004684 47 KLRVLVIG--AGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (737)
Q Consensus 47 ~~dVvIVG--AGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (737)
..+|+||| +|..|+-+|..|++.|.+|++++..+++.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 35799999 99999999999999999999999987654
No 421
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=81.84 E-value=0.83 Score=48.90 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=30.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-------CcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG-------FRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-------~~V~VLEa~~ 80 (737)
++|.|||+|.-|.+-|..|+++| ++|++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 57999999999999999999999 9999998865
No 422
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=81.63 E-value=1.3 Score=46.37 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCC----CcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG----FRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G----~~V~VLEa~~ 80 (737)
++|.|||+|..|.+-|..|.++| ++|++++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 68999999999999999999999 7899998754
No 423
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.58 E-value=1.5 Score=44.46 Aligned_cols=33 Identities=36% Similarity=0.506 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|.|+|..|...+..|.+.|++|+++.++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 689999999999999999999999999998754
No 424
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=81.54 E-value=1.5 Score=46.25 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=30.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
...+|+|||||..|.+.|+.|+..|+ ++.++|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34899999999999999999999997 79999974
No 425
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=81.53 E-value=1.1 Score=49.88 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|.|||+|.-|.+-|..|+++|++|++++++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 78999999999999999999999999999875
No 426
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=81.50 E-value=1.2 Score=49.46 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||+|..|..-|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 689999999999999999999999999998753
No 427
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=81.49 E-value=1.1 Score=46.99 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=29.5
Q ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAG-LAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAG-iAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
..+|+|||+| +.|-.+|..|...|.+|+|.+++
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4899999999 67999999999999999988664
No 428
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=81.47 E-value=1.2 Score=46.72 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=30.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 46 NKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
...+|+|||||..|.+.|+.|+..|+ ++.++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34799999999999999999999987 79999974
No 429
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=81.39 E-value=0.97 Score=46.41 Aligned_cols=33 Identities=27% Similarity=0.339 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
++|+|||+|-+|-++|+.|.+.|. +|+|+.++.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 789999999999999999999998 899998753
No 430
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=81.37 E-value=1.1 Score=46.79 Aligned_cols=33 Identities=30% Similarity=0.478 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (737)
++|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999987 899999854
No 431
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=81.32 E-value=1.2 Score=44.74 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCC----CcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG----FRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G----~~V~VLEa~~ 80 (737)
++|.|||+|.-|.+-|..|+++| ++|++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 68999999999999999999999 6999998865
No 432
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=81.29 E-value=1.5 Score=44.35 Aligned_cols=31 Identities=32% Similarity=0.478 Sum_probs=29.4
Q ss_pred cEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 49 RVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
+|+|||+|-+|-++++.|.+.|. +|+|+.++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 89999999999999999999998 89999875
No 433
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=81.28 E-value=1.3 Score=46.25 Aligned_cols=36 Identities=28% Similarity=0.307 Sum_probs=30.2
Q ss_pred CCCCcEEEECc-cHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 45 SNKLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 45 ~~~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+.++|+|.|| |..|...+..|.+.|++|+++.+..
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 34578999999 9999999999999999999998765
No 434
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=81.25 E-value=0.51 Score=47.13 Aligned_cols=32 Identities=34% Similarity=0.436 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|.|||+|.-|-+-|..|.++|++|+++++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 78999999999999999999999999998874
No 435
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=81.05 E-value=1.1 Score=45.75 Aligned_cols=32 Identities=31% Similarity=0.376 Sum_probs=29.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||+|..|..-|..|++ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999998753
No 436
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=81.01 E-value=0.74 Score=48.71 Aligned_cols=33 Identities=27% Similarity=0.231 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-------CcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLG-------FRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-------~~V~VLEa~~ 80 (737)
++|+|||+|.-|.+.|..|+++| ++|++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 58999999999999999999999 8999998864
No 437
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=81.01 E-value=1.5 Score=44.81 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=29.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.++|+|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4789999999999999999999996 89999774
No 438
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=80.85 E-value=1.5 Score=42.55 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=29.4
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|.|| |..|...+..|.++|++|+++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 46999998 999999999999999999999875
No 439
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=80.77 E-value=1.6 Score=43.64 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC----cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF----RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~----~V~VLEa~ 79 (737)
++|.|||+|..|.+-|..|.++|+ +|++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 689999999999999999999998 99999875
No 440
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=80.75 E-value=1.3 Score=49.19 Aligned_cols=32 Identities=31% Similarity=0.539 Sum_probs=30.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|.|||+|..|..-|..|+++|++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999875
No 441
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=80.69 E-value=1.2 Score=44.93 Aligned_cols=31 Identities=32% Similarity=0.289 Sum_probs=28.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (737)
++|.|||+|..|.+-|..|++.|++|+++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 3699999999999999999999999998654
No 442
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=80.48 E-value=1.2 Score=45.08 Aligned_cols=32 Identities=38% Similarity=0.553 Sum_probs=29.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCc-EEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFR-VTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~-V~VLEa~ 79 (737)
++|.|||+|..|..-|..|++.|++ |.+++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 6899999999999999999999999 8888864
No 443
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=80.45 E-value=0.96 Score=50.58 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=29.3
Q ss_pred CcEEEECccHHHHHHHHHHHHC--------------CCcEEEEccCCCc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--------------GFRVTVLEGRKRA 82 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--------------G~~V~VLEa~~r~ 82 (737)
..++|||||.+|+-.|..|++. ..+|+|+|+.+++
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 4699999999999999988764 3679999998754
No 444
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=80.45 E-value=1.6 Score=44.12 Aligned_cols=31 Identities=42% Similarity=0.449 Sum_probs=29.6
Q ss_pred cEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 49 RVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
+|+|||+|-.|-+.|+.|.+.|++|+|++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999876
No 445
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=80.35 E-value=0.78 Score=49.60 Aligned_cols=31 Identities=26% Similarity=0.254 Sum_probs=28.6
Q ss_pred CcEEEECccHHHHHHHHHHHH-CCCcEEEEcc
Q 004684 48 LRVLVIGAGLAGLAAARQLMR-LGFRVTVLEG 78 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa 78 (737)
++|+|||+|..|.+.|..|++ +|++|++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 589999999999999999998 5999999983
No 446
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=80.31 E-value=1.5 Score=46.35 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|.|||.|..|-+-|..|.++|++|++++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999753
No 447
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=80.29 E-value=1.6 Score=44.85 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=29.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.++|+|+|||-+|-++|+.|++.|. +|+|+.++
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3789999999999999999999998 69999775
No 448
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=80.27 E-value=1.6 Score=45.70 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=30.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.++|+|+|||-+|-++|+.|++.|. +|+|+.++
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3789999999999999999999998 79999876
No 449
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=80.25 E-value=1.4 Score=45.33 Aligned_cols=33 Identities=21% Similarity=0.125 Sum_probs=30.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
..+|+|||+|-+|-++|+.|.+.|. +|+|+.++
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3789999999999999999999998 79999875
No 450
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=80.25 E-value=1.5 Score=48.41 Aligned_cols=33 Identities=33% Similarity=0.301 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+.|+|+|+|-.|.++|..|+..|.+|++.|.+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 789999999999999999999999999998753
No 451
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=80.06 E-value=1.6 Score=46.33 Aligned_cols=32 Identities=16% Similarity=0.346 Sum_probs=29.3
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 48 LRVLVIGA-GLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
.+|+|||| |..|.++|+.|+..|. +|+++|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 78999998 9999999999999995 79999974
No 452
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=79.97 E-value=1.6 Score=46.51 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|+|+|+|-.|..+|..|.+.|.+|+|.+..
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 78999999999999999999999999999864
No 453
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=79.87 E-value=1.2 Score=48.64 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+.-|||.|.-|+..|..|+++|++|++++.+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 678999999999999999999999999999864
No 454
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=79.76 E-value=1.7 Score=45.81 Aligned_cols=33 Identities=36% Similarity=0.327 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|||+|..|-+-|..|.+.|++|++++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 679999999999999999999999999988753
No 455
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=79.73 E-value=1.1 Score=46.40 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=28.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.+|.+||-|..|..-|..|.++|++|++++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999754
No 456
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=79.70 E-value=1.2 Score=45.74 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=28.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
+.|+|+|||-.|.+.|+.|++.| +|+|+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 68999999999999999999999 99999775
No 457
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=79.63 E-value=1.9 Score=44.14 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=30.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC---cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF---RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~---~V~VLEa~~ 80 (737)
++|.|||+|.-|-+-|..|.+.|+ +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 789999999999999999999999 899998854
No 458
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=79.51 E-value=1.5 Score=46.06 Aligned_cols=35 Identities=17% Similarity=0.394 Sum_probs=30.4
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 45 SNKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
++..+|+|||||-.|.+.|+.|+..+. ++.++|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 344899999999999999999998886 79999874
No 459
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=79.51 E-value=0.69 Score=45.84 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=30.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+.+|+|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 3789999999999999999999999 99999864
No 460
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=79.49 E-value=1.6 Score=44.79 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.++|+|+|+|-+|-+.|+.|++.|. +|+|+.++
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 3789999999999999999999996 89999875
No 461
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=79.34 E-value=1 Score=46.08 Aligned_cols=30 Identities=30% Similarity=0.492 Sum_probs=28.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLE 77 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLE 77 (737)
++|.|||+|..|...|..|++.|++|++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 689999999999999999999999999998
No 462
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=79.28 E-value=1.4 Score=44.29 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=29.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|.|||+|..|..-|..|.+.|++|.+++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 68999999999999999999999999999874
No 463
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=79.16 E-value=2.2 Score=39.88 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=33.3
Q ss_pred cCCcccCceEEEEEecCCcEEEEE-CCeEEEecEEEEccCh
Q 004684 256 NVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPL 295 (737)
Q Consensus 256 gl~I~lnt~V~~I~~~~~~V~V~~-~G~~i~AD~VI~AvP~ 295 (737)
+++++++ +|++|+.+++++.|++ +| ++++|.||+|+..
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTT
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCC
Confidence 6889999 9999999888888887 55 8999999999974
No 464
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=78.63 E-value=1.7 Score=44.57 Aligned_cols=42 Identities=19% Similarity=0.264 Sum_probs=31.2
Q ss_pred hcccCCCcEEEeccccccccCceeeHHHHHHHHHHHHHHHHHhhh
Q 004684 448 AESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANAR 492 (737)
Q Consensus 448 ~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~ 492 (737)
++.+ ++||-|||.+... +..+.-|+..|..||..|.+.|...
T Consensus 261 ~Ts~--p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 261 RTSE--KNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp BCSS--TTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCC--CCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445 7899999988642 2235568889999999999888543
No 465
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.54 E-value=1.5 Score=44.49 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|+|||..|...+..|.++|++|+++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 789999999999999999999999999998754
No 466
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=78.45 E-value=1.3 Score=49.45 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHH-HHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLA-AARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLs-AA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|-+|++ +|..|.+.|++|++.|...
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 378999999999997 6999999999999999754
No 467
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=78.33 E-value=2.1 Score=43.74 Aligned_cols=33 Identities=36% Similarity=0.530 Sum_probs=30.0
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|.|| |.-|-.-+.+|.++|++|+++-+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57999999 9999999999999999999997654
No 468
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=77.94 E-value=1.6 Score=45.57 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=29.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
.+|+|||||-.|.+.|+.|+..|. +|.++|..
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 799999999999999999999885 79999864
No 469
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=77.94 E-value=2.1 Score=44.69 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=30.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.++|+|+|||=+|-++|+.|++.|. +|+|+-++
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3789999999999999999999998 79999876
No 470
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=77.86 E-value=2 Score=44.36 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=30.0
Q ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAG-LAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAG-iAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
..+|+|||+| +.|.-+|..|...|..|+|+.+.
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 4899999999 68999999999999999999753
No 471
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=77.81 E-value=2.2 Score=40.53 Aligned_cols=33 Identities=33% Similarity=0.575 Sum_probs=30.4
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|+|| |..|...+..|.+.|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999998753
No 472
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=77.63 E-value=2.1 Score=43.66 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=29.8
Q ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAG-LAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAG-iAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++|+|||+| +.|..+|..|.+.|..|+|..++
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4899999976 79999999999999999999763
No 473
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=77.39 E-value=2.4 Score=44.69 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|-.|...|..|+..|++|++++++.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 3789999999999999999999999999998754
No 474
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=77.36 E-value=2.2 Score=46.40 Aligned_cols=33 Identities=30% Similarity=0.288 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+.|+|||.|..|..+|..|...|.+|+++|.++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 799999999999999999999999999999753
No 475
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=77.35 E-value=1.7 Score=45.49 Aligned_cols=33 Identities=18% Similarity=0.389 Sum_probs=29.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
+.+|+|||||-.|.+.|+.|+..+. ++.++|-.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4799999999999999999999886 79999874
No 476
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=77.23 E-value=1.6 Score=45.07 Aligned_cols=32 Identities=25% Similarity=0.478 Sum_probs=29.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEcc
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEG 78 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa 78 (737)
+.+|+|||+|-.|-.+|.+|+++|+ +++|+|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~ 68 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDY 68 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECC
Confidence 3799999999999999999999997 5888886
No 477
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=77.16 E-value=1.9 Score=44.97 Aligned_cols=32 Identities=34% Similarity=0.636 Sum_probs=29.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (737)
.+|+|||+|..|-+.|+.|+..|. +|.++|..
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 689999999999999999998885 79999975
No 478
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=77.14 E-value=2.1 Score=43.73 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=29.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.+|+|||+|-+|-++|+.|.+.|. +|+|+-++
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 689999999999999999999997 79999875
No 479
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.10 E-value=2.2 Score=44.94 Aligned_cols=33 Identities=30% Similarity=0.608 Sum_probs=29.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
+.+|+|||+|=.|-.+|..|+..|+ +++|++..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 3899999999999999999999998 58888873
No 480
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=77.07 E-value=2.1 Score=46.85 Aligned_cols=30 Identities=40% Similarity=0.640 Sum_probs=28.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC---cEEEEc
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF---RVTVLE 77 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~---~V~VLE 77 (737)
.+|+|+|||-+|.++|+.|.+.|. +|+|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 789999999999999999999998 799998
No 481
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=76.99 E-value=2 Score=47.64 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
++|.|||+|..|..-|..|+++|++|++++++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 68999999999999999999999999999875
No 482
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=76.98 E-value=1.9 Score=46.78 Aligned_cols=34 Identities=35% Similarity=0.450 Sum_probs=31.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
..+|+|||+|-.|..+|..|...|. +|++++++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3789999999999999999999998 899998764
No 483
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=76.71 E-value=2.3 Score=43.98 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=29.6
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++|+|||+ |+.|..+|..|.+.|..|+|+.++
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 489999996 569999999999999999999874
No 484
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=76.67 E-value=2.3 Score=47.36 Aligned_cols=33 Identities=33% Similarity=0.387 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
..|+|||+|..|..+|..|...|.+|+++|.+.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 789999999999999999999999999999753
No 485
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=76.00 E-value=2.5 Score=43.22 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=30.1
Q ss_pred CCcEEEEC-ccHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIG-AGLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVG-AGiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.+.|+|+| +|-.|.+.|+.|++.|.+|+++.++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 37899999 8999999999999999999999775
No 486
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=75.94 E-value=2.7 Score=43.10 Aligned_cols=35 Identities=40% Similarity=0.555 Sum_probs=31.7
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 47 KLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.++|+|.|| |..|...+..|.+.|++|+++.+...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 378999999 99999999999999999999987653
No 487
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=75.65 E-value=5.1 Score=42.00 Aligned_cols=34 Identities=35% Similarity=0.508 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|-.|...|..|+..|++|++++.+.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3789999999999999999999999999999754
No 488
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=75.26 E-value=2.7 Score=45.78 Aligned_cols=33 Identities=33% Similarity=0.305 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
+.|+|||.|..|..+|..|...|.+|+++|...
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 789999999999999999999999999999853
No 489
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=74.84 E-value=2.6 Score=42.48 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=29.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (737)
.+|+|||+|-.|..+|..|++.|+ +++|++..
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 799999999999999999999998 58898874
No 490
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=74.77 E-value=2.5 Score=43.37 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=29.8
Q ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGAG-LAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGAG-iAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.++|+|||+| +.|.-+|..|...|..|+|+.+.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4899999999 67999999999999999999754
No 491
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=74.58 E-value=2.5 Score=43.22 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=28.5
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEccC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGR 79 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~ 79 (737)
++|.|||+|..|.+-|..|.+. |++|++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 6899999999999999999988 5788888764
No 492
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=74.53 E-value=3.8 Score=42.35 Aligned_cols=33 Identities=30% Similarity=0.410 Sum_probs=30.2
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCcEEEEccC
Q 004684 47 KLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGR 79 (737)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~ 79 (737)
.+.|+|.|| |..|...+..|.+.|++|+++.++
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 378999998 999999999999999999998774
No 493
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=74.49 E-value=27 Score=40.21 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=28.4
Q ss_pred CcEEEeccccccccC---ceeeHHHHHHHHHHHHHHHHHhh
Q 004684 454 GRLFFAGEATIRRYP---ATMHGAFLSGLRETAKMAHCANA 491 (737)
Q Consensus 454 ~~L~fAGd~ts~~~~---g~~eGAi~SG~~AA~~Il~~l~~ 491 (737)
+|++++||+.+...| .+|+-|++.+...|..|...+++
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g 391 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG 391 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC
Confidence 899999999985333 27778888888777777666543
No 494
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=74.48 E-value=3 Score=43.88 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
.++|.|||.|-.|...|..|...|++|++++++.
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~ 197 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSK 197 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 3789999999999999999999999999999764
No 495
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=76.49 E-value=0.63 Score=45.31 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|.|||+|-.|.+-|..|.+.|++|++++++.
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 689999999999999999999999999998754
No 496
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=74.35 E-value=2.8 Score=40.72 Aligned_cols=33 Identities=30% Similarity=0.547 Sum_probs=30.4
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEccCC
Q 004684 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (737)
++|+|+|| |..|...+..|.+.|++|+++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 68999996 9999999999999999999998864
No 497
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=74.15 E-value=2.2 Score=44.06 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=28.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEccCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (737)
++|+|||||--|-++|+.|...+. ++.|+|-..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 579999999999999999988875 699998743
No 498
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=73.84 E-value=2.5 Score=43.95 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=28.8
Q ss_pred cEEEECccHHHHHHHHHHHHCCC-cEEEEccCC
Q 004684 49 RVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (737)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (737)
+|+|||||..|.+.|+.|+..|+ +|.++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999888 699999753
No 499
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=73.39 E-value=3 Score=47.11 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=32.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEccCCC
Q 004684 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (737)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (737)
.+|+|||+|-.|...|..|.+.|++|+|+|....
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 7899999999999999999999999999999764
No 500
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=73.33 E-value=2.3 Score=44.33 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=29.5
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCC--CcEEEEccCC
Q 004684 48 LRVLVIGA-GLAGLAAARQLMRLG--FRVTVLEGRK 80 (737)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G--~~V~VLEa~~ 80 (737)
++|+|||| |..|.+.|+.|+..| .+|.++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999988 5799999865
Done!