Query 004688
Match_columns 737
No_of_seqs 322 out of 1992
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 11:14:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004688.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004688hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02638 cellulose synthase A 100.0 6E-172 1E-176 1490.7 55.6 711 3-731 253-1056(1079)
2 PLN02195 cellulose synthase A 100.0 2E-171 4E-176 1476.7 58.0 711 2-731 155-952 (977)
3 PLN02436 cellulose synthase A 100.0 3E-171 6E-176 1479.8 58.3 709 4-731 270-1071(1094)
4 PLN02400 cellulose synthase 100.0 1E-171 3E-176 1488.8 55.0 710 4-731 261-1061(1085)
5 PLN02189 cellulose synthase 100.0 3E-171 7E-176 1480.9 57.2 710 3-731 235-1017(1040)
6 PLN02190 cellulose synthase-li 100.0 2E-170 5E-175 1442.1 57.1 704 1-732 5-755 (756)
7 PLN02893 Cellulose synthase-li 100.0 2E-169 5E-174 1442.6 61.7 702 2-736 9-733 (734)
8 PLN02248 cellulose synthase-li 100.0 9E-170 2E-174 1470.6 57.0 717 4-731 267-1115(1135)
9 PLN02915 cellulose synthase A 100.0 2E-169 4E-174 1466.6 59.2 712 3-731 191-1021(1044)
10 PF03552 Cellulose_synt: Cellu 100.0 3E-157 6E-162 1332.4 39.6 622 97-731 1-703 (720)
11 PRK11498 bcsA cellulose syntha 100.0 8.4E-74 1.8E-78 674.8 53.6 488 21-714 187-686 (852)
12 TIGR03030 CelA cellulose synth 100.0 2.6E-73 5.6E-78 673.0 55.7 508 20-715 56-574 (713)
13 PRK05454 glucosyltransferase M 100.0 7.9E-39 1.7E-43 373.9 54.5 360 19-546 40-420 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 2.6E-35 5.7E-40 332.6 42.4 230 91-502 71-306 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 1.5E-36 3.3E-41 318.2 25.4 242 97-498 1-253 (254)
16 COG1215 Glycosyltransferases, 100.0 5.6E-35 1.2E-39 327.3 30.7 233 94-502 53-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 3E-33 6.4E-38 313.2 42.5 230 91-502 50-285 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 1.2E-33 2.7E-38 318.5 38.4 282 91-554 45-341 (439)
19 PRK14716 bacteriophage N4 adso 100.0 3.4E-30 7.4E-35 292.2 39.7 263 92-526 63-354 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 2.7E-30 5.8E-35 265.4 23.0 227 95-496 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 8.2E-30 1.8E-34 260.2 22.8 229 95-500 1-234 (234)
22 PRK11234 nfrB bacteriophage N4 100.0 1.1E-27 2.3E-32 281.9 37.4 240 87-501 56-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 6.3E-29 1.4E-33 257.3 22.7 231 95-502 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 6.7E-28 1.4E-32 247.6 22.5 229 98-501 1-233 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 100.0 1.4E-28 3.1E-33 251.0 8.7 224 95-495 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 99.9 4.8E-26 1E-30 251.7 26.8 228 92-497 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 99.9 2E-26 4.2E-31 240.1 15.7 171 271-498 64-243 (244)
28 cd02520 Glucosylceramide_synth 99.9 3.6E-25 7.7E-30 222.2 18.1 193 95-495 1-195 (196)
29 PRK15489 nfrB bacteriophage N4 99.9 2.9E-23 6.4E-28 241.8 36.5 236 91-500 67-341 (703)
30 cd04192 GT_2_like_e Subfamily 99.9 3.5E-24 7.6E-29 217.4 21.4 222 99-495 1-229 (229)
31 cd06439 CESA_like_1 CESA_like_ 99.9 5.5E-24 1.2E-28 220.5 21.1 225 90-498 24-250 (251)
32 cd06434 GT2_HAS Hyaluronan syn 99.9 7.2E-24 1.6E-28 217.0 21.0 229 96-498 1-234 (235)
33 TIGR03469 HonB hopene-associat 99.9 5.8E-22 1.3E-26 220.1 34.3 229 91-493 36-279 (384)
34 COG2943 MdoH Membrane glycosyl 99.9 4.5E-20 9.7E-25 201.1 45.9 195 264-529 222-423 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 1.8E-20 3.9E-25 192.6 22.1 224 96-501 1-232 (249)
36 cd06438 EpsO_like EpsO protein 99.8 2.3E-19 4.9E-24 178.0 13.4 161 99-372 1-167 (183)
37 cd06436 GlcNAc-1-P_transferase 99.8 7.6E-19 1.6E-23 176.0 15.6 164 99-372 1-175 (191)
38 PF13632 Glyco_trans_2_3: Glyc 99.8 1.8E-17 3.9E-22 165.5 16.4 137 287-496 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 3.6E-17 7.7E-22 163.4 17.1 193 95-469 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 3E-16 6.4E-21 156.8 17.2 189 98-469 1-195 (201)
41 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.4E-15 3.1E-20 162.9 18.8 110 98-312 1-110 (299)
42 cd06433 GT_2_WfgS_like WfgS an 99.7 1.8E-15 3.9E-20 149.5 16.3 186 98-469 1-188 (202)
43 PLN02726 dolichyl-phosphate be 99.6 1E-14 2.2E-19 151.5 20.9 123 93-325 7-129 (243)
44 cd04196 GT_2_like_d Subfamily 99.6 5.3E-15 1.2E-19 148.4 17.1 161 98-372 1-164 (214)
45 cd02522 GT_2_like_a GT_2_like_ 99.6 2.8E-14 6E-19 144.5 18.2 178 97-466 1-178 (221)
46 cd06442 DPM1_like DPM1_like re 99.6 4.8E-14 1.1E-18 143.0 19.8 114 99-325 1-114 (224)
47 cd06913 beta3GnTL1_like Beta 1 99.6 5.5E-14 1.2E-18 143.2 20.1 111 99-312 1-111 (219)
48 cd06420 GT2_Chondriotin_Pol_N 99.6 4.4E-14 9.6E-19 138.7 17.7 104 99-310 1-104 (182)
49 cd04186 GT_2_like_c Subfamily 99.6 3E-14 6.6E-19 136.5 15.0 157 99-469 1-159 (166)
50 PRK10073 putative glycosyl tra 99.6 3.4E-14 7.3E-19 154.9 17.3 109 94-313 5-113 (328)
51 PF13506 Glyco_transf_21: Glyc 99.6 5.5E-14 1.2E-18 139.8 14.3 153 265-494 15-175 (175)
52 cd04185 GT_2_like_b Subfamily 99.5 2E-13 4.4E-18 136.8 17.6 118 99-329 1-118 (202)
53 cd06423 CESA_like CESA_like is 99.5 7.5E-14 1.6E-18 133.0 11.7 160 99-372 1-166 (180)
54 cd04188 DPG_synthase DPG_synth 99.5 6.2E-13 1.3E-17 134.6 17.9 108 99-314 1-111 (211)
55 PRK10018 putative glycosyl tra 99.5 4.9E-13 1.1E-17 142.6 17.8 109 93-311 3-111 (279)
56 cd02526 GT2_RfbF_like RfbF is 99.5 1.4E-13 3.1E-18 141.0 12.5 139 252-469 49-198 (237)
57 PRK10063 putative glycosyl tra 99.5 1.3E-12 2.8E-17 137.0 19.6 48 95-146 1-49 (248)
58 PF00535 Glycos_transf_2: Glyc 99.5 9.1E-14 2E-18 132.4 7.6 163 98-372 1-165 (169)
59 PTZ00260 dolichyl-phosphate be 99.4 2.8E-11 6E-16 132.3 24.8 117 92-312 67-189 (333)
60 PF03142 Chitin_synth_2: Chiti 99.4 4.6E-11 1E-15 135.9 27.2 166 283-501 200-379 (527)
61 cd04179 DPM_DPG-synthase_like 99.4 1.8E-12 3.9E-17 127.4 13.0 162 99-372 1-163 (185)
62 TIGR01556 rhamnosyltran L-rham 99.3 3E-11 6.6E-16 128.2 13.8 145 250-469 45-195 (281)
63 cd04187 DPM1_like_bac Bacteria 99.3 8.5E-11 1.8E-15 115.8 14.5 51 251-311 56-106 (181)
64 PRK13915 putative glucosyl-3-p 99.2 8.1E-11 1.8E-15 127.2 12.2 123 93-324 29-152 (306)
65 PRK10714 undecaprenyl phosphat 99.2 2.2E-09 4.7E-14 117.1 23.4 110 94-311 5-116 (325)
66 PF10111 Glyco_tranf_2_2: Glyc 99.2 6.6E-10 1.4E-14 118.6 17.9 134 266-469 74-216 (281)
67 cd00761 Glyco_tranf_GTA_type G 99.2 8.2E-10 1.8E-14 102.5 14.9 113 99-325 1-114 (156)
68 KOG2571 Chitin synthase/hyalur 99.1 1.5E-09 3.2E-14 127.8 16.8 168 266-495 424-596 (862)
69 COG1216 Predicted glycosyltran 99.1 2.5E-09 5.5E-14 115.4 17.5 121 94-327 2-123 (305)
70 COG0463 WcaA Glycosyltransfera 98.8 2.4E-08 5.2E-13 95.5 11.9 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 98.8 4.1E-08 8.9E-13 101.3 12.7 44 265-313 56-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.7 4.8E-08 1E-12 104.5 10.3 152 265-494 155-314 (431)
73 KOG2978 Dolichol-phosphate man 98.2 4.1E-05 8.9E-10 75.5 15.4 60 251-324 64-123 (238)
74 KOG2977 Glycosyltransferase [G 98.0 4.9E-05 1.1E-09 79.5 10.6 43 265-311 142-186 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.7 0.00037 8E-09 76.2 13.4 43 97-143 2-44 (334)
76 KOG3737 Predicted polypeptide 95.9 0.033 7.1E-07 60.8 9.0 49 91-142 151-199 (603)
77 PF02364 Glucan_synthase: 1,3- 95.8 0.21 4.7E-06 60.0 16.1 74 445-523 408-482 (817)
78 PF13704 Glyco_tranf_2_4: Glyc 95.2 0.048 1E-06 48.3 6.3 35 107-146 1-35 (97)
79 KOG3738 Predicted polypeptide 95.2 0.052 1.1E-06 59.6 7.3 49 92-143 121-169 (559)
80 KOG3736 Polypeptide N-acetylga 94.6 0.028 6.1E-07 65.3 3.9 48 92-142 139-186 (578)
81 PF13712 Glyco_tranf_2_5: Glyc 93.5 0.22 4.8E-06 51.4 7.6 50 265-322 39-89 (217)
82 TIGR02460 osmo_MPGsynth mannos 86.5 4.6 9.9E-05 44.3 10.0 43 265-310 141-183 (381)
83 COG4092 Predicted glycosyltran 86.4 8 0.00017 41.0 11.4 80 249-331 61-141 (346)
84 PF03452 Anp1: Anp1; InterPro 86.4 4.4 9.5E-05 43.3 9.7 56 92-151 22-79 (269)
85 KOG0916 1,3-beta-glucan syntha 85.4 1.6 3.4E-05 54.9 6.5 72 445-521 1172-1244(1679)
86 PF03071 GNT-I: GNT-I family; 84.9 6.9 0.00015 44.5 11.0 49 92-145 90-139 (434)
87 PRK14503 mannosyl-3-phosphogly 83.9 2.4 5.1E-05 46.6 6.4 43 265-310 142-184 (393)
88 PF09488 Osmo_MPGsynth: Mannos 81.6 7.8 0.00017 42.8 9.2 43 265-310 141-183 (381)
89 cd00899 b4GalT Beta-4-Galactos 78.0 11 0.00025 39.0 8.8 37 265-302 47-83 (219)
90 PRK14502 bifunctional mannosyl 77.0 14 0.0003 44.5 10.3 43 265-310 146-188 (694)
91 PF01644 Chitin_synth_1: Chiti 74.4 67 0.0014 31.9 12.6 52 252-309 111-162 (163)
92 PRK09382 ispDF bifunctional 2- 55.4 28 0.00061 39.1 6.8 40 268-311 83-122 (378)
93 PF05679 CHGN: Chondroitin N-a 50.9 1.8E+02 0.0039 34.0 12.7 47 252-306 316-362 (499)
94 PF13896 Glyco_transf_49: Glyc 48.1 23 0.00051 38.7 4.6 47 271-322 118-164 (317)
95 TIGR03584 PseF pseudaminic aci 47.3 2E+02 0.0043 29.6 11.1 60 265-324 75-134 (222)
96 PF02709 Glyco_transf_7C: N-te 40.7 31 0.00068 29.7 3.3 22 448-469 46-67 (78)
97 PF11316 Rhamno_transf: Putati 35.6 3.8E+02 0.0082 28.1 11.1 42 268-311 97-140 (234)
98 PF02434 Fringe: Fringe-like; 35.5 1.6E+02 0.0034 31.2 8.3 28 283-311 85-112 (252)
99 PF06306 CgtA: Beta-1,4-N-acet 34.5 1.4E+02 0.0031 32.8 7.7 35 265-303 159-193 (347)
100 KOG4179 Lysyl hydrolase/glycos 31.6 33 0.00071 38.6 2.4 37 267-308 97-133 (568)
101 cd02503 MobA MobA catalyzes th 26.8 2.2E+02 0.0047 27.6 7.2 42 265-310 68-109 (181)
102 PLN02728 2-C-methyl-D-erythrit 26.2 1.7E+02 0.0037 30.9 6.6 41 268-310 103-143 (252)
103 PRK02726 molybdopterin-guanine 24.3 2.6E+02 0.0056 28.1 7.4 42 266-311 78-119 (200)
104 PF06638 Strabismus: Strabismu 24.2 1.2E+02 0.0027 35.1 5.4 16 721-736 206-221 (505)
105 cd02540 GT2_GlmU_N_bac N-termi 23.3 2.8E+02 0.0061 27.8 7.6 46 265-312 72-117 (229)
106 TIGR03310 matur_ygfJ molybdenu 23.0 2.2E+02 0.0047 27.7 6.4 43 266-311 74-116 (188)
107 PF04724 Glyco_transf_17: Glyc 21.1 2.6E+02 0.0057 31.3 7.1 35 270-306 165-199 (356)
108 KOG3814 Signaling protein van 21.1 2E+02 0.0043 32.4 5.9 48 687-736 198-245 (531)
109 PRK00317 mobA molybdopterin-gu 20.7 2E+02 0.0043 28.4 5.7 42 266-311 74-115 (193)
110 PLN03153 hypothetical protein; 20.4 7E+02 0.015 29.5 10.4 30 283-314 209-238 (537)
No 1
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=6.4e-172 Score=1490.71 Aligned_cols=711 Identities=33% Similarity=0.647 Sum_probs=655.1
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004688 3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (737)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (737)
..+|||++++.+++. .+||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|.|+.||+|++|
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 478899999988873 67999999999999999999999843 3568999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004688 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF 154 (737)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~ 154 (737)
.+++++|.+ ++++|.||||||||||++|||.+++|||+|+|++|||.|||.|||+|||++.+|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998864 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004688 155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVE-------DGE---------Y 217 (737)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~-------~~~---------~ 217 (737)
||+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.+ +|+ +
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 9999999999999999999999988 5567788899999999999999999999998752 122 4
Q ss_pred CCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004688 218 GNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 297 (737)
Q Consensus 218 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~ 297 (737)
.+++|||+|+|+++.++++. |.++.++|+|+||+|||||+++||+||||||+++|+|++|||||||+++||||++
T Consensus 489 ~~~~dHp~IiqVll~~~~~~-----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYi 563 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGGL-----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYI 563 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCcc-----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCccc
Confidence 57899999999776554332 3456789999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cc
Q 004688 298 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 376 (737)
Q Consensus 298 ~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~ 376 (737)
|||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+|||+|+||||+|||+|||| .|
T Consensus 564 Nns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p 643 (1079)
T PLN02638 564 NNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEP 643 (1079)
T ss_pred CchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 44
Q ss_pred cccc--------------------------c-------------------------------ch-------HhhHhhhcC
Q 004688 377 KHKG--------------------------I-------------------------------DL-------AELKDTFGE 392 (737)
Q Consensus 377 ~~~~--------------------------~-------------------------------d~-------~~~~~~~~~ 392 (737)
+... . +. .+++++||+
T Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~ 723 (1079)
T PLN02638 644 PIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQ 723 (1079)
T ss_pred cccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccc
Confidence 3210 0 00 134578999
Q ss_pred chhHHHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCC
Q 004688 393 SNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRP 472 (737)
Q Consensus 393 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~ 472 (737)
|.+||+|+..+.++.. +...+++++++|+.|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++
T Consensus 724 S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~ 801 (1079)
T PLN02638 724 SAVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRP 801 (1079)
T ss_pred cHHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCch
Confidence 9999999988875533 23456899999999999999999999999999999999999999999999999999987778
Q ss_pred eeEeccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccC-CCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCC
Q 004688 473 QFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGI 551 (737)
Q Consensus 473 ~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~ 551 (737)
++.|+||+|+.+++.||+|||+|++||+++|+||++++ .++|++.||++|+++++|| ++++|.++|+++|++||++|+
T Consensus 802 AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~ 880 (1079)
T PLN02638 802 AFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGK 880 (1079)
T ss_pred HhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999976 3789999999999999999 999999999999999999999
Q ss_pred CccccccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCc
Q 004688 552 PLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL 631 (737)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~ 631 (737)
+++|.++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++|+++++++++++|+||+++++|.||+|..
T Consensus 881 ~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~ 960 (1079)
T PLN02638 881 FIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 960 (1079)
T ss_pred ccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred chhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHcccC
Q 004688 632 DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKD 709 (737)
Q Consensus 632 ~~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~ 709 (737)
+.++. ++++|+|+ ++++++|.++++++|++|+++|+++++.++ .|+.+++++|+|+|++++++||++||++||
T Consensus 961 d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~- 1035 (1079)
T PLN02638 961 DEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ- 1035 (1079)
T ss_pred ccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 65432 25899999 999999999999999999999999998755 688999999999999999999999999997
Q ss_pred CCCCChhHHHHHHHHHHHHHHh
Q 004688 710 KGRISPSAILLSSVFFVTFLFF 731 (737)
Q Consensus 710 k~~~p~~~~~~~~~~~~~~~~~ 731 (737)
+|+|+++++||++|+++|+++
T Consensus 1036 -~r~P~~v~v~s~ll~~~~~l~ 1056 (1079)
T PLN02638 1036 -NRTPTIVVVWSILLASIFSLL 1056 (1079)
T ss_pred -CCCCeeehHHHHHHHHHHHHH
Confidence 788999999999999999885
No 2
>PLN02195 cellulose synthase A
Probab=100.00 E-value=1.8e-171 Score=1476.72 Aligned_cols=711 Identities=33% Similarity=0.635 Sum_probs=654.3
Q ss_pred CCCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecc
Q 004688 2 ESPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (737)
Q Consensus 2 ~~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 80 (737)
|..+|||++++.+++. ++||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|.|+.||+|++
T Consensus 155 ~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~ 230 (977)
T PLN02195 155 DAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPV----DSAFGLWLTSVICEIWFAFSWVLDQFPKWSPIN 230 (977)
T ss_pred cccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcc----ccchHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 3468899999988874 46999999999999999999998843 345699999999999999999999999999999
Q ss_pred ccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHH
Q 004688 81 RTVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFR 153 (737)
Q Consensus 81 r~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~ 153 (737)
|.+++++|.+ ++++|.||||||||||++|||.+++|||+|+|+.|||.|||.|||+|||++.+|+++|.||++
T Consensus 231 R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~ 310 (977)
T PLN02195 231 RETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAE 310 (977)
T ss_pred ceECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHH
Confidence 9999998853 246999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------
Q 004688 154 FAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-GE--------------- 216 (737)
Q Consensus 154 ~a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-~~--------------- 216 (737)
|||+||||||||+|||||||+||+.+ +..++..+|+|++||++||++|||||+|||++.+. +.
T Consensus 311 FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~ 390 (977)
T PLN02195 311 FARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWP 390 (977)
T ss_pred HHHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCC
Confidence 99999999999999999999999988 45557778999999999999999999999998643 11
Q ss_pred CCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 004688 217 YGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY 296 (737)
Q Consensus 217 ~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~ 296 (737)
+.+++|||+||||+++++++. |.++.++|+|+||+|||||+++||+||||||+++|+|++|||||||+++||||+
T Consensus 391 g~~~~dHp~IIqVll~~~~~~-----d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy 465 (977)
T PLN02195 391 GNNTRDHPGMIQVFLGETGAR-----DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHY 465 (977)
T ss_pred CCCCCCCcchhhhhccCCCCc-----ccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccc
Confidence 457899999999998776532 446678999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-C
Q 004688 297 CNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-N 375 (737)
Q Consensus 297 ~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~ 375 (737)
++||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+|||+||||||+|||+|||| +
T Consensus 466 ~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~ 545 (977)
T PLN02195 466 VNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYG 545 (977)
T ss_pred cCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccC
Confidence 998899999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred cccc---------------------cc---------------------------c---------hHhhHhhhcCchhHHH
Q 004688 376 FKHK---------------------GI---------------------------D---------LAELKDTFGESNLFIK 398 (737)
Q Consensus 376 ~~~~---------------------~~---------------------------d---------~~~~~~~~~~~~~~~~ 398 (737)
|+.. +. | ..+++++||+|.+|++
T Consensus 546 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~ 625 (977)
T PLN02195 546 PPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIE 625 (977)
T ss_pred ccccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHH
Confidence 4321 00 0 1135568999999999
Q ss_pred hhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEecc
Q 004688 399 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTS 478 (737)
Q Consensus 399 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~a 478 (737)
|+..+..+... ...+++++++|+.|+||.||++|+||+++||.|+|+|||+.||++||++||||+||++.++++.|++
T Consensus 626 S~~~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~A 703 (977)
T PLN02195 626 STLMENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSA 703 (977)
T ss_pred HHHHHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccC
Confidence 99877654332 2346789999999999999999999999999999999999999999999999999998778999999
Q ss_pred CCCHHHHHHHhHHHhcchhhhHHhhcCCcccCC--CCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCcccc
Q 004688 479 TTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPE 556 (737)
Q Consensus 479 P~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~--~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~ 556 (737)
|+|+.+++.||+|||+|++||+++|+||+++|. ++|+++||++|+++++|+ ++++|.++|+++|++||++|++++|.
T Consensus 704 P~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~ 782 (977)
T PLN02195 704 PINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPT 782 (977)
T ss_pred CCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeeccc
Confidence 999999999999999999999999999999763 789999999999999999 99999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhh
Q 004688 557 VSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQV 636 (737)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~ 636 (737)
++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++|+++++++++++|++|+++++|.||+|..++++
T Consensus 783 vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~- 861 (977)
T PLN02195 783 LSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTE- 861 (977)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccc-
Confidence 9898999999999999999999999999999999999999999999999999999999999999999999999876432
Q ss_pred hhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 004688 637 KRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 714 (737)
Q Consensus 637 ~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p 714 (737)
..++|+|+ ++++++|.++++++|++|+++|+++++.++ .|+.+++++++++|++++++||++||++|| +|+|
T Consensus 862 ---~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P 935 (977)
T PLN02195 862 ---FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTP 935 (977)
T ss_pred ---hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCC
Confidence 24788998 999999999999999999999999998755 688999999999999999999999999997 7889
Q ss_pred hhHHHHHHHHHHHHHHh
Q 004688 715 PSAILLSSVFFVTFLFF 731 (737)
Q Consensus 715 ~~~~~~~~~~~~~~~~~ 731 (737)
+++++||++|+++|+++
T Consensus 936 ~~v~v~s~ll~~~~~l~ 952 (977)
T PLN02195 936 TIVVLWSVLLASVFSLV 952 (977)
T ss_pred eeehHHHHHHHHHHHHH
Confidence 99999999999999985
No 3
>PLN02436 cellulose synthase A
Probab=100.00 E-value=2.6e-171 Score=1479.84 Aligned_cols=709 Identities=33% Similarity=0.640 Sum_probs=651.9
Q ss_pred CCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecccc
Q 004688 4 PLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (737)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (737)
.+|||++++.+++. .+||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|.|+.||+|++|.
T Consensus 270 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~----~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~ 345 (1094)
T PLN02436 270 RQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPV----NDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERE 345 (1094)
T ss_pred CCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----cccHHHHHHHHHHHHHHHHHHHHccCcccccccce
Confidence 77899999988874 46999999999999999999998843 24689999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhh
Q 004688 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFA 155 (737)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a 155 (737)
+++++|.+ ++++|.|||||+||||++|||.+++|||+|+|++|||.|||.|||+|||++.+|+++|.||++||
T Consensus 346 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 425 (1094)
T PLN02436 346 TYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFA 425 (1094)
T ss_pred eCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99998863 24699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-C------C---------CC
Q 004688 156 KWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-G------E---------YG 218 (737)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-~------~---------~~ 218 (737)
|+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.+. + + +.
T Consensus 426 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~ 505 (1094)
T PLN02436 426 RKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGN 505 (1094)
T ss_pred HhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCC
Confidence 999999999999999999999988 55667778899999999999999999999998653 1 1 45
Q ss_pred CCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004688 219 NSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 298 (737)
Q Consensus 219 ~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~ 298 (737)
+++|||+||||++.++++. |.++.++|+|+||+|||||+++||+||||||+++|+|++|||+|||+++||||++|
T Consensus 506 ~~~dHp~IIqVll~~~~~~-----d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiN 580 (1094)
T PLN02436 506 NVRDHPGMIQVFLGHSGVR-----DVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYIN 580 (1094)
T ss_pred CCCCCccceEEEecCCCCc-----ccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccC
Confidence 7899999999887664332 45667899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Ccc
Q 004688 299 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 377 (737)
Q Consensus 299 ~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~ 377 (737)
||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+
T Consensus 581 ns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp 660 (1094)
T PLN02436 581 NSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP 660 (1094)
T ss_pred chHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 433
Q ss_pred ccc----------------------------------------------------------------cchHhhHhhhcCc
Q 004688 378 HKG----------------------------------------------------------------IDLAELKDTFGES 393 (737)
Q Consensus 378 ~~~----------------------------------------------------------------~d~~~~~~~~~~~ 393 (737)
... .+..+++++||+|
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S 740 (1094)
T PLN02436 661 KKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQS 740 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhccc
Confidence 100 0012355789999
Q ss_pred hhHHHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCe
Q 004688 394 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQ 473 (737)
Q Consensus 394 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~ 473 (737)
.+|++|+..+..+ .+....+++++++|++|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus 741 ~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 818 (1094)
T PLN02436 741 PVFVASTLLENGG--VPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPA 818 (1094)
T ss_pred HHHHHHHHHhhcC--CCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchh
Confidence 9999999888743 22333567899999999999999999999999999999999999999999999999999887789
Q ss_pred eEeccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccC-CCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCC
Q 004688 474 FLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIP 552 (737)
Q Consensus 474 ~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~ 552 (737)
+.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|+++|||+|+++++|+ ++++|.++|+++|++||++|++
T Consensus 819 F~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G~~ 897 (1094)
T PLN02436 819 FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTGKF 897 (1094)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCe
Confidence 9999999999999999999999999999999999976 3689999999999999999 9999999999999999999999
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcc
Q 004688 553 LYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLD 632 (737)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~ 632 (737)
++|.++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++|+++++++++++|+||+++++|.||+|..+
T Consensus 898 i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d 977 (1094)
T PLN02436 898 IVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAAD 977 (1094)
T ss_pred ecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Q 004688 633 NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 710 (737)
Q Consensus 633 ~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k 710 (737)
.+. .+++|+|+ ++++++|+++++++|++|+++|+.+++.++ .|+.+++++|+++|++++++||++||++| +
T Consensus 978 ~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr--~ 1050 (1094)
T PLN02436 978 DGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK--Q 1050 (1094)
T ss_pred ccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--C
Confidence 432 23678998 899999999999999999999999998755 68899999999999999999999999955 5
Q ss_pred CCCChhHHHHHHHHHHHHHHh
Q 004688 711 GRISPSAILLSSVFFVTFLFF 731 (737)
Q Consensus 711 ~~~p~~~~~~~~~~~~~~~~~ 731 (737)
+|+|+++++||++|+++|+++
T Consensus 1051 ~r~P~~v~v~s~lla~~~~l~ 1071 (1094)
T PLN02436 1051 DRMPTIILVWSILLASILTLL 1071 (1094)
T ss_pred CCCCeeehHHHHHHHHHHHHH
Confidence 599999999999999999985
No 4
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.3e-171 Score=1488.75 Aligned_cols=710 Identities=32% Similarity=0.641 Sum_probs=653.5
Q ss_pred CCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecccc
Q 004688 4 PLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (737)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (737)
.+|||++++.++++ .+||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|.|+.||+|++|.
T Consensus 261 ~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 336 (1085)
T PLN02400 261 RLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPV----KDAYGLWLTSVICEIWFALSWLLDQFPKWYPINRE 336 (1085)
T ss_pred cCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----cccHHHHHHHHHHHHHHHHHHHHccCcccccccce
Confidence 68899999988873 57999999999999999999998853 24689999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhh
Q 004688 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFA 155 (737)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a 155 (737)
+++++|.+ ++++|.||||||||||++|||.+++|||+|+|++|||.|||.|||+|||++.+|+++|.||++||
T Consensus 337 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA 416 (1085)
T PLN02400 337 TYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFA 416 (1085)
T ss_pred eCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99998863 24699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhh-------hcCC---------CC
Q 004688 156 KWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAV-------EDGE---------YG 218 (737)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~-------~~~~---------~~ 218 (737)
|+||||||||+|||||||+||+.+ ++.++..+++|++||++||++|||||+|||.+. ++|+ +.
T Consensus 417 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~ 496 (1085)
T PLN02400 417 RKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGN 496 (1085)
T ss_pred HhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCC
Confidence 999999999999999999999988 555677789999999999999999999999875 2221 45
Q ss_pred CCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004688 219 NSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 298 (737)
Q Consensus 219 ~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~ 298 (737)
+++|||+||||++.++++. |.++.++|+|+||+|||||+++||+||||||+.+|+||+|||+|||+++||||++|
T Consensus 497 ~~~dHp~iIqVll~~~~~~-----d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~N 571 (1085)
T PLN02400 497 NPRDHPGMIQVFLGHSGGL-----DTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFN 571 (1085)
T ss_pred CCCCCchhhhhhhcCCCCc-----ccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccC
Confidence 7899999999887665432 34667899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Ccc
Q 004688 299 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 377 (737)
Q Consensus 299 ~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~ 377 (737)
||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.+.|+||+|||+|+||||+|||+|||| .|+
T Consensus 572 ns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~ 651 (1085)
T PLN02400 572 NSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPV 651 (1085)
T ss_pred CchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 442
Q ss_pred cc-----c---------------------------------------------------------cchHhhHhhhcCchh
Q 004688 378 HK-----G---------------------------------------------------------IDLAELKDTFGESNL 395 (737)
Q Consensus 378 ~~-----~---------------------------------------------------------~d~~~~~~~~~~~~~ 395 (737)
.. . .+.++++++||+|.+
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~ 731 (1085)
T PLN02400 652 LTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPV 731 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHH
Confidence 00 0 001235679999999
Q ss_pred HHHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeE
Q 004688 396 FIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFL 475 (737)
Q Consensus 396 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~ 475 (737)
||+|+..+..+ .++...+++++++|++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.
T Consensus 732 fi~S~~~~~~~--~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~ 809 (1085)
T PLN02400 732 FIAATFMEQGG--IPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFK 809 (1085)
T ss_pred HHHHHHHHhcC--CCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhc
Confidence 99999855422 2333456889999999999999999999999999999999999999999999999999998789999
Q ss_pred eccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccC-CCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCcc
Q 004688 476 GTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLY 554 (737)
Q Consensus 476 g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~ 554 (737)
|+||+|+.+++.||+|||+|++||+++|+||+++| .++|++.|||+|+++++|| ++++|.++|+++|++||++|++++
T Consensus 810 GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG~~i~ 888 (1085)
T PLN02400 810 GSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITNKFII 888 (1085)
T ss_pred CcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCccC
Confidence 99999999999999999999999999999999976 4799999999999999999 999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchh
Q 004688 555 PEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNE 634 (737)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~ 634 (737)
|.++.+++++|+++++++++++++|++|+|.++++|||+||+|+|.++|+++++++++++|++|+++++|.||+|..+.+
T Consensus 889 P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~ 968 (1085)
T PLN02400 889 PEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 968 (1085)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred hhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 004688 635 QVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGR 712 (737)
Q Consensus 635 ~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~ 712 (737)
.. .+++|+|+ ++++++|+++++++|++|+++|+++++.++ .|+.+++++|+|+|++++++||++||++|+ +|
T Consensus 969 ~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~--~r 1042 (1085)
T PLN02400 969 GD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ--NR 1042 (1085)
T ss_pred cc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC--CC
Confidence 31 25899999 999999999999999999999999998755 688999999999999999999999999887 89
Q ss_pred CChhHHHHHHHHHHHHHHh
Q 004688 713 ISPSAILLSSVFFVTFLFF 731 (737)
Q Consensus 713 ~p~~~~~~~~~~~~~~~~~ 731 (737)
+|+++++||++|+++|+++
T Consensus 1043 ~P~~v~~~s~lla~~~~l~ 1061 (1085)
T PLN02400 1043 TPTIVIVWSILLASIFSLL 1061 (1085)
T ss_pred CceeHHHHHHHHHHHHHHH
Confidence 9999999999999999985
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=3.3e-171 Score=1480.92 Aligned_cols=710 Identities=33% Similarity=0.647 Sum_probs=652.7
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004688 3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (737)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (737)
..+|||++++.+++. ++||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|.|+.||+|++|
T Consensus 235 ~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 235 ARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPV----HDAIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcC----ccchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 478899999988874 46999999999999999999998843 2458999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004688 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF 154 (737)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~ 154 (737)
.+++++|.+ ++++|.||||||||||++|||.+++|||+|+|+.|||.|||.|||+|||++.+|+++|.||++|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998863 1249999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004688 155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVE-------DGE---------Y 217 (737)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~-------~~~---------~ 217 (737)
||+||||||||+|||||||+||+.+ +..+++.+++|++||++||++|||||+|||.+.+ +++ +
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g 470 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPG 470 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCC
Confidence 9999999999999999999999988 5566778889999999999999999999998752 112 3
Q ss_pred CCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004688 218 GNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 297 (737)
Q Consensus 218 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~ 297 (737)
.+++|||+|+|+++.++++. |.++.++|+|+||+|||||+++||+||||||+++|+|++|||||||+++||||++
T Consensus 471 ~~~~dHp~IiQVll~~~~~~-----d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~ 545 (1040)
T PLN02189 471 NNTRDHPGMIQVFLGHSGGH-----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYI 545 (1040)
T ss_pred CCCCCCHHHHHHHhcCCCCc-----cccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCcccc
Confidence 57899999999877654432 3456789999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cc
Q 004688 298 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 376 (737)
Q Consensus 298 ~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~ 376 (737)
|||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|
T Consensus 546 Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p 625 (1040)
T PLN02189 546 NNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDP 625 (1040)
T ss_pred CchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 44
Q ss_pred ccc-------------------cc------------------------chHhhHhhhcCchhHHHhhhhhccccccCCcc
Q 004688 377 KHK-------------------GI------------------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 413 (737)
Q Consensus 377 ~~~-------------------~~------------------------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 413 (737)
... .. ...+++++||+|.+|++|+..+..+. +...
T Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~ 703 (1040)
T PLN02189 626 PKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGV--PPSS 703 (1040)
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCC--CCCC
Confidence 310 00 01345578999999999998875322 2233
Q ss_pred chhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHh
Q 004688 414 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 493 (737)
Q Consensus 414 ~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa 493 (737)
.+++++++|+.|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||+|+.+++.||+||+
T Consensus 704 ~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA 783 (1040)
T PLN02189 704 SPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWA 783 (1040)
T ss_pred CcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHh
Confidence 56789999999999999999999999999999999999999999999999999998789999999999999999999999
Q ss_pred cchhhhHHhhcCCcccCC--CCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCccccccchhHHHHHHHHHH
Q 004688 494 SGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLS 571 (737)
Q Consensus 494 ~G~~qi~~~~~~pl~~~~--~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~~~ 571 (737)
+|++||+++|+||++++. ++|++.|||+|+++++|+ ++++|.++|+++|++||++|++++|.++.+++++|+.++++
T Consensus 784 ~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~ 862 (1040)
T PLN02189 784 LGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMS 862 (1040)
T ss_pred hhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHH
Confidence 999999999999999763 679999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccch
Q 004688 572 AICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSV 651 (737)
Q Consensus 572 ~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~ 651 (737)
++++.++|++|+|.+.++|||+||+|+|.++|+++++++++++|++|+++++|.||+|..++++ .++.|+|+ +++
T Consensus 863 ~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~----~~~ly~f~-~s~ 937 (1040)
T PLN02189 863 IFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDE----FGELYAFK-WTT 937 (1040)
T ss_pred HHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceeccccccccc----cccceeec-cee
Confidence 9999999999999999999999999999999999999999999999999999999999876543 14899999 999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCChhHHHHHHHHHHHHH
Q 004688 652 FLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFL 729 (737)
Q Consensus 652 ~~~P~~~l~~l~l~al~~gi~r~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p~~~~~~~~~~~~~~~ 729 (737)
+++|.++++++|++|+++|+++++.++ .|+.+++++++|+|++++++||++||++|| +|+|+++++||++++++|+
T Consensus 938 l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~ 1015 (1040)
T PLN02189 938 LLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFS 1015 (1040)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHH
Confidence 999999999999999999999998755 688999999999999999999999999997 7889999999999999998
Q ss_pred Hh
Q 004688 730 FF 731 (737)
Q Consensus 730 ~~ 731 (737)
++
T Consensus 1016 l~ 1017 (1040)
T PLN02189 1016 LL 1017 (1040)
T ss_pred HH
Confidence 85
No 6
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=2.3e-170 Score=1442.09 Aligned_cols=704 Identities=33% Similarity=0.593 Sum_probs=640.8
Q ss_pred CCCCCCceeeeecCchhhHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecc
Q 004688 1 MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (737)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 80 (737)
|.+++|||++++.+++ ++|++.+++++++++|++||+++.++. .+.|+.+++||+|++++|+|+|+.+|+|++
T Consensus 5 ~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~ 77 (756)
T PLN02190 5 SSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-----DTVWLVAFLCESCFSFVWLLITCIKWSPAE 77 (756)
T ss_pred cCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-----cHHHHHHHHHHHHHHHHHHHhccceeeecC
Confidence 3568999999998887 599999999999999999999997654 257899999999999999999999999999
Q ss_pred ccCCCCCCCC-CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhh
Q 004688 81 RTVFPERLPE-DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWI 159 (737)
Q Consensus 81 r~~~~~~l~~-~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~ 159 (737)
|.++|++|++ -+++|+||||||||||++|||.+|+||++|+|++|||+|||.|||+|||++++|+++|.||++|||+||
T Consensus 78 r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 78 YKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 9999999875 346999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC-----CCCCCCCccee
Q 004688 160 PFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE-----YGNSRNHSTII 227 (737)
Q Consensus 160 pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------~~-----~~~~~~h~~i~ 227 (737)
||||||+|||||||+||+... ++..+++|++||++||++|||||+|||++.+. +. +++++|||+||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~--~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~ii 235 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPP--VATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIV 235 (756)
T ss_pred ccccccCCCcCCHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccce
Confidence 999999999999999999742 23345799999999999999999999998421 11 47899999999
Q ss_pred eeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHH
Q 004688 228 EQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 307 (737)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v 307 (737)
||+++++++ +.++.++|+++||+|||||+++||+||||||+.+|+||+|||+|||+++||||++|||++++++|
T Consensus 236 qVll~~~~~------~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~Am 309 (756)
T PLN02190 236 KVVWENKGG------VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAM 309 (756)
T ss_pred EEEecCCCC------ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhh
Confidence 988765322 23467899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCC-CceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cccccc-----
Q 004688 308 CFHLDPKTS-SSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG----- 380 (737)
Q Consensus 308 ~~f~D~~~~-~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~~~----- 380 (737)
|||+|++.+ +++||||+||+|+ |+|+|++++||++.+.|.||+|||+|+||||+|||+|||| +|+...
T Consensus 310 Cf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~ 384 (756)
T PLN02190 310 CIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSL 384 (756)
T ss_pred hhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccc
Confidence 999998744 5899999999998 7899999999999999999999999999999999999999 554321
Q ss_pred --------cchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHH
Q 004688 381 --------IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFF 452 (737)
Q Consensus 381 --------~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~ 452 (737)
.+..+++++||+|.+|++|+..+..+... +....++++++|++|++|.||++|+||+++||.|+|+|||+.
T Consensus 385 ~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~-~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~ 463 (756)
T PLN02190 385 SSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPN-PQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLN 463 (756)
T ss_pred cccccccccchhhhhhhcCCcHHHHHHHHHHhccCCC-CccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHH
Confidence 11234568999999999999887644332 223356899999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccC-CCCCchHHHHHHHHHhHhhHH
Q 004688 453 TGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLL 531 (737)
Q Consensus 453 t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~Y~~~~~~~~l 531 (737)
||++||++||||+||+++++++.|.+|+++.+.+.||+||++|++|++++|+||++++ .++|++.||++|++.++ | +
T Consensus 464 TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~ 541 (756)
T PLN02190 464 TSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-L 541 (756)
T ss_pred HHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-H
Confidence 9999999999999999888999999999999999999999999999999999999975 58999999999999877 8 9
Q ss_pred hHHHHHHHHHHHHHHHHcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHH
Q 004688 532 YCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMD 611 (737)
Q Consensus 532 ~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~ 611 (737)
+++|+++|+++|++||++|++++|.. +|+++++++++++++++++|++|+|+++++|||+||+|+|.++|++++++++
T Consensus 542 ~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~ 619 (756)
T PLN02190 542 RSIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQD 619 (756)
T ss_pred HHHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHH
Confidence 99999999999999999999999964 6888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceeeccCCcc-------------hhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 004688 612 AIMKLLGLRKASFLPTNKVLD-------------NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV- 677 (737)
Q Consensus 612 ~l~~~lg~~~~~F~VT~K~~~-------------~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r~~~~- 677 (737)
+++|++|+++++|+||+|..+ ++++++|++|+|+|+ +|++++|.++++++|++|+++|+++++..
T Consensus 620 ~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~ 698 (756)
T PLN02190 620 IILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSS 698 (756)
T ss_pred HHHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999754 344678999999999 99999999999999999999999987642
Q ss_pred ----CCchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCChhHHHHHHHHHHHHHHhh
Q 004688 678 ----GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFG 732 (737)
Q Consensus 678 ----~~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p~~~~~~~~~~~~~~~~~~ 732 (737)
+.++.+ ++++.|+|+|++++||++||+ |||||+||+|++++|++|+++|++|+
T Consensus 699 ~s~~~~~~~l-~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 699 YSHGGGGSGL-AEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred hccCcccccH-HHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 345554 999999999999999999998 99999999999999999999999986
No 7
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.1e-169 Score=1442.60 Aligned_cols=702 Identities=39% Similarity=0.765 Sum_probs=644.8
Q ss_pred CCCCCceeeeecCchhhHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004688 2 ESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (737)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (737)
++.+||||+++.+++ .+||+++++++++++++++||+++.... ...|.|+++++||+||+|+|+++|+.||+|++|
T Consensus 9 ~~~~pL~~~~~~~~~-~~~R~~~~~~~~~i~~ll~~r~~~~~~~---~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHS---TTTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeecCCc-hHHHHHHHHHHHHHHHHHHHHhcccccc---cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 457899999998886 4699999999999999999999887643 236899999999999999999999999999999
Q ss_pred cCCCCCCCC---CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhh
Q 004688 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWW 158 (737)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w 158 (737)
.+++++|.+ ++++|.||||||||||++|||.+++|||+|+|+.|||.||+.|||+|||++++|+++|.||++|||+|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999874 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCC--------------------CC
Q 004688 159 IPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGE--------------------YG 218 (737)
Q Consensus 159 ~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~--------------------~~ 218 (737)
|||||||+|||||||+||+.+ .+++.+||++||++|||||+|||++.+.+. ++
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~-------~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSN-------SHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccC-------CCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 999999999999999999975 245678999999999999999999853222 35
Q ss_pred CCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004688 219 NSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 298 (737)
Q Consensus 219 ~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~ 298 (737)
+++|||+|+|++++++++. |.++.++|+++|++|||||+++||+||||||+++++|+.+||||||+++||||++|
T Consensus 238 ~~~dH~~ivqV~l~~~~~~-----d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n 312 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKDK-----DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSN 312 (734)
T ss_pred CCCCCCceeeeeccCCCcc-----chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCC
Confidence 7899999999888765442 44567899999999999999999999999999999999999999999999999998
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccc
Q 004688 299 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKH 378 (737)
Q Consensus 299 ~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~ 378 (737)
||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+||++||||||+|||+||+|.+..
T Consensus 313 ~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~ 392 (734)
T PLN02893 313 DPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSS 392 (734)
T ss_pred chhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCcc
Confidence 99999999999999998999999999999999999999999999999999999999999999999999999999985431
Q ss_pred cccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHH
Q 004688 379 KGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILH 458 (737)
Q Consensus 379 ~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~ 458 (737)
...+ + ...++++. .......+++++++|++|++|.||++|+||+++||.|+|+|||++||++||
T Consensus 393 ~~~~--~-~~~~~~~~-------------~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh 456 (734)
T PLN02893 393 LILP--E-IPELNPDH-------------LVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQ 456 (734)
T ss_pred ccch--h-hhhccccc-------------ccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHH
Confidence 1000 0 00111110 011122357899999999999999999999999999999999999999999
Q ss_pred HCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccCCCCCchHHHHHHHHHhHhhHHhHHHHHH
Q 004688 459 CKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWC 538 (737)
Q Consensus 459 ~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~Y~~~~~~~~l~~~~~l~ 538 (737)
++||||+||+++++++.|++|+|+.++++||+||++|++|++++|+||+++|.++|++.||++|++.++|+ ++++|.++
T Consensus 457 ~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~li 535 (734)
T PLN02893 457 CEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITI 535 (734)
T ss_pred hcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHH
Confidence 99999999998778899999999999999999999999999999999999877899999999999999999 99999999
Q ss_pred HHHHHHHHHHcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 004688 539 FATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLG 618 (737)
Q Consensus 539 ~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg 618 (737)
|+++|++||++|++++|+.+.+|+++++++++++++++++|++|+|.++++|||+||+|++.++++++++++++++|++|
T Consensus 536 Y~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg 615 (734)
T PLN02893 536 YAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLG 615 (734)
T ss_pred HHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeccCCcchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHH
Q 004688 619 LRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINF 698 (737)
Q Consensus 619 ~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r~~~~~~~~~~~~~~~~~~~~~~~l~ 698 (737)
+++++|+||+|+.+.++.++|++|.|+|+.++++++|+++++++|++|+++|+++++.++.+++++++++||+|++++++
T Consensus 616 ~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~ 695 (734)
T PLN02893 616 ISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCW 695 (734)
T ss_pred ccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999988777889999999999779999999999999999999999999877778888999999999999999
Q ss_pred HHHHHHHcccCCCCCChhHHHHHHHHHHHHHHhhhhcc
Q 004688 699 AIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL 736 (737)
Q Consensus 699 p~~~al~~r~~k~~~p~~~~~~~~~~~~~~~~~~~~~~ 736 (737)
||++|+++|||||+||+++++||++|+++++.+.++++
T Consensus 696 P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~ 733 (734)
T PLN02893 696 PIYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAF 733 (734)
T ss_pred HHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999998875
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=8.8e-170 Score=1470.58 Aligned_cols=717 Identities=31% Similarity=0.578 Sum_probs=646.4
Q ss_pred CCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecccc
Q 004688 4 PLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (737)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (737)
.+|||++++.++.. ++||+++++++++++++|+||+++ ++.++.|+|+++++||+||+|+|+|.|+.||+|++|.
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 47899999988874 469999999999999999999988 3345689999999999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHH
Q 004688 83 VFPERLPE------------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMRE 150 (737)
Q Consensus 83 ~~~~~l~~------------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~e 150 (737)
+++++|.+ ++++|.||||||||||++|||.+++|||+|+|+.|||.|||.|||+|||++.+|+++|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99887743 236999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc---------------
Q 004688 151 AFRFAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED--------------- 214 (737)
Q Consensus 151 a~~~a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~--------------- 214 (737)
|++|||+||||||||+|||||||+||+.+ ++.+++..++|++||++||++|||||+|||.+.+.
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 99999999999999999999999999988 55567778999999999999999999999987420
Q ss_pred ----------C------------C----------------CCCCCCCcceeeeeecCCCCC---------chhhhhcccc
Q 004688 215 ----------G------------E----------------YGNSRNHSTIIEQIIQDTSGE---------NETIRQADLV 247 (737)
Q Consensus 215 ----------~------------~----------------~~~~~~h~~i~~~~~~~~~~~---------~~~~~~~~~~ 247 (737)
+ + +++++|||+||||++++++.+ +...++..+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 0 0 357889999999998765521 1112334556
Q ss_pred ccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCce
Q 004688 248 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQK 327 (737)
Q Consensus 248 ~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~ 327 (737)
++|+|+||+|||||+++||+||||||+.+|+|++|||||||+++||||++|||++++++||||+||+ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999997 889999999999
Q ss_pred eccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cccccc--------------------------
Q 004688 328 FHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG-------------------------- 380 (737)
Q Consensus 328 f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~~~-------------------------- 380 (737)
|+|.+++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|+...
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999 554220
Q ss_pred ---------cchHhhHhhhcCchhHHHhhhhhcc-ccc-----------------cCCccchhhHHHhhhhhcccccccc
Q 004688 381 ---------IDLAELKDTFGESNLFIKSLHQSYE-HKN-----------------VNGENLSNVLQQETEVLASCSYEHQ 433 (737)
Q Consensus 381 ---------~d~~~~~~~~~~~~~~~~s~~~~~~-~~~-----------------~~~~~~~~~~~~~~~~v~~c~ye~~ 433 (737)
.+...+.++||+|.+|++|+..+.. +.+ .+....+++++++|+.|++|.||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 0012345689999999999966541 111 0123346789999999999999999
Q ss_pred ccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccCCCC
Q 004688 434 TKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSR 513 (737)
Q Consensus 434 ~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~ 513 (737)
|+||+++||.|+|+|||+.||++||++||||+||+++++++.|++|+|+.++++||+|||+|++||+++|++|++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998778899999999999999999999999999999999998875 79
Q ss_pred CchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Q 004688 514 MSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNE 593 (737)
Q Consensus 514 L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~ 593 (737)
|++.||++|+++++|+ +.+++.++|+++|++||++|++++|+.+..++++++.++++++.++++|++|+|.+.++|||+
T Consensus 901 Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrn 979 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRN 979 (1135)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhh
Confidence 9999999999999999 999999999999999999999999987544444444667888999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHH
Q 004688 594 QRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIR 673 (737)
Q Consensus 594 ~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r 673 (737)
||+|+|.++++++++++++++|++++++++|+||+|+.+.+.+++| ++.|+|+ ++++++|+++++++|++|+++|++|
T Consensus 980 Qq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R 1057 (1135)
T PLN02248 980 EQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSR 1057 (1135)
T ss_pred hheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887766677 5999998 8999999999999999999999999
Q ss_pred hhhc--CCchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCChhHHHHHHHHHHHHHHh
Q 004688 674 MIAV--GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 731 (737)
Q Consensus 674 ~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p~~~~~~~~~~~~~~~~~ 731 (737)
++.+ +.|+.+++++++++|++++++||++||++| |+|+|+++++||++++++++++
T Consensus 1058 ~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll 1115 (1135)
T PLN02248 1058 TIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLL 1115 (1135)
T ss_pred HHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHH
Confidence 9864 356788999999999999999999999998 8888999999999999999885
No 9
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=1.9e-169 Score=1466.56 Aligned_cols=712 Identities=33% Similarity=0.632 Sum_probs=651.5
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004688 3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (737)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (737)
..+|||++++.+++. .+||+++++++++++++++||+++ ++.++.|+|+++++||+||+|+|+|.|+.||+|++|
T Consensus 191 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 266 (1044)
T PLN02915 191 ARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPINR 266 (1044)
T ss_pred cCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 368899999988874 469999999999999999999998 334678999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004688 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF 154 (737)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~ 154 (737)
.+++++|.+ ++++|.|||||+||||++|||.+++|||+|+|++|||.|||.|||+|||++.+|+++|.||++|
T Consensus 267 ~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 346 (1044)
T PLN02915 267 ETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEF 346 (1044)
T ss_pred ccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHH
Confidence 999998863 2359999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------C
Q 004688 155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE---------Y 217 (737)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------~~---------~ 217 (737)
||+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||++.++ |+ +
T Consensus 347 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g 426 (1044)
T PLN02915 347 ARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPG 426 (1044)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCC
Confidence 9999999999999999999999988 55667778899999999999999999999988643 21 3
Q ss_pred CCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004688 218 GNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 297 (737)
Q Consensus 218 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~ 297 (737)
.+.+|||+||||++.++++ .|.++.++|+|+||+|||||+++||+||||||+.+|+|++|||+|||+++||||++
T Consensus 427 ~~~~dHp~IIqVll~~~~~-----~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~ 501 (1044)
T PLN02915 427 NNTRDHPGMIQVYLGSEGA-----LDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYI 501 (1044)
T ss_pred CCCCCCccceEEeecCCCC-----cccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeecccccc
Confidence 4578999999988765432 24466789999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cc
Q 004688 298 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 376 (737)
Q Consensus 298 ~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~ 376 (737)
|||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.+.|+||+|||+|+||||+|||+|||| .|
T Consensus 502 Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~p 581 (1044)
T PLN02915 502 NNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDP 581 (1044)
T ss_pred CcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 44
Q ss_pred cccc----------------------------------------------------------------------------
Q 004688 377 KHKG---------------------------------------------------------------------------- 380 (737)
Q Consensus 377 ~~~~---------------------------------------------------------------------------- 380 (737)
+..+
T Consensus 582 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1044)
T PLN02915 582 PVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIE 661 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3100
Q ss_pred --------------cchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCC
Q 004688 381 --------------IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQS 446 (737)
Q Consensus 381 --------------~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~s 446 (737)
.....++++||+|.+|++|+..+..+ .+....+++++++|++|+||.||++|+||+++||.|+|
T Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGS 739 (1044)
T PLN02915 662 EGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGG--LPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGS 739 (1044)
T ss_pred cccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcC--CCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccc
Confidence 00123556899999999999886533 33344678999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccC-CCCCchHHHHHHHHH
Q 004688 447 VSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEM 525 (737)
Q Consensus 447 ltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~Y~~~ 525 (737)
+|||+.||++||++||||+||+++++++.|++|+|+.++++||+|||+|++||+++++||++++ .++|+++||++|+++
T Consensus 740 vTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~ 819 (1044)
T PLN02915 740 VTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINT 819 (1044)
T ss_pred cccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHH
Confidence 9999999999999999999998878899999999999999999999999999999999999975 379999999999999
Q ss_pred hHhhHHhHHHHHHHHHHHHHHHHcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHH
Q 004688 526 SLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSH 605 (737)
Q Consensus 526 ~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~ 605 (737)
++|+ +.+++.++|+++|++||++|++++|.++..+..+|++++++++++.++|++|+|.++++|||+||+|+|.++|++
T Consensus 820 ~~yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~ 898 (1044)
T PLN02915 820 IVYP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAH 898 (1044)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHH
Confidence 9999 999999999999999999999999987776777778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHhhhc--CCchHH
Q 004688 606 FYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV--GNWDKL 683 (737)
Q Consensus 606 ~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r~~~~--~~~~~~ 683 (737)
+++++++++++||+++++|+||+|+.+.++++. ++.|+|+ ++++++|+++++++|++|+++|+++++.. +.|+.+
T Consensus 899 Lfavl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l 975 (1044)
T PLN02915 899 LFAVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPL 975 (1044)
T ss_pred HHHHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 999999999999999999999999876544322 5899999 99999999999999999999999998764 467889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccCCCCCChhHHHHHHHHHHHHHHh
Q 004688 684 FAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 731 (737)
Q Consensus 684 ~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p~~~~~~~~~~~~~~~~~ 731 (737)
+++++.++|++++++||++||++|+ +|+|+++++||++|+++|+++
T Consensus 976 ~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll 1021 (1044)
T PLN02915 976 FGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLV 1021 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHH
Confidence 9999999999999999999999997 788999999999999999985
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=2.8e-157 Score=1332.38 Aligned_cols=622 Identities=43% Similarity=0.809 Sum_probs=578.8
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004688 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (737)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf 176 (737)
|||||||+||++|||.+++|||+|+|++|||.|||.|||+|||++++|+++|.||++|||+||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------CCCCCCCcceeeeeecCCCCCch
Q 004688 177 SEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVE-------DGE---------YGNSRNHSTIIEQIIQDTSGENE 239 (737)
Q Consensus 177 ~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~-------~~~---------~~~~~~h~~i~~~~~~~~~~~~~ 239 (737)
+.+ +..++..+++|++||++||++|||||+|||.+.+ +++ +++++|||+|+|+++.++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~-- 158 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK-- 158 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc--
Confidence 988 6677788999999999999999999999998743 222 467999999999888765443
Q ss_pred hhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCce
Q 004688 240 TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSL 319 (737)
Q Consensus 240 ~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~v 319 (737)
|.++..+|+|+||+|||||+++||+||||||+++|+|++|||+|||+++||||++|||+.++++||||+||+.++++
T Consensus 159 ---~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~ 235 (720)
T PF03552_consen 159 ---DVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKI 235 (720)
T ss_pred ---ccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCee
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cccccc------------------
Q 004688 320 AFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG------------------ 380 (737)
Q Consensus 320 g~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~~~------------------ 380 (737)
||||+||+|+|.+++|+|+|++++||+++++|+||+|||+|+||||+|||+|||| .|+...
T Consensus 236 ~~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k 315 (720)
T PF03552_consen 236 AFVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRK 315 (720)
T ss_pred EEEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcc
Confidence 9999999999999999999999999999999999999999999999999999999 554210
Q ss_pred -------c-----------------------------------chHhhHhhhcCchhHHHhhhhhccccccCCccchhhH
Q 004688 381 -------I-----------------------------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVL 418 (737)
Q Consensus 381 -------~-----------------------------------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 418 (737)
. +..+++++||+|.+||+|+..+.+ ..++....+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~ 393 (720)
T PF03552_consen 316 KKKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASL 393 (720)
T ss_pred cccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHH
Confidence 0 014666899999999999986553 23334456899
Q ss_pred HHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcchhh
Q 004688 419 QQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLID 498 (737)
Q Consensus 419 ~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q 498 (737)
++||++|+||.||++|+||+++||.|+++|||+.||++||++||||+||++++++|.|.||+|+.+.+.|++|||.|.+|
T Consensus 394 L~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslE 473 (720)
T PF03552_consen 394 LEEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLE 473 (720)
T ss_pred HHHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhcCCcccC-CCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCccccccchhHHHHHHHHHHHHHHHH
Q 004688 499 VSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHL 577 (737)
Q Consensus 499 i~~~~~~pl~~~-~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 577 (737)
|++||+||++++ .++|++.|||+|++.++|+ ++|+|.++|+++|++||++|++++|+++.+++++|+++|++++++++
T Consensus 474 I~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~l 552 (720)
T PF03552_consen 474 IFFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSL 552 (720)
T ss_pred eehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHH
Confidence 999999999987 5899999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccchhHHHHH
Q 004688 578 QEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMV 657 (737)
Q Consensus 578 l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~~~P~~ 657 (737)
+|++|+|.++++|||+||+|+|.++++++++++++++|++|+++++|.||+|+.++++++.+ +.|+|+ ++++++|.+
T Consensus 553 lE~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~t 629 (720)
T PF03552_consen 553 LEFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPT 629 (720)
T ss_pred HHHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHH
Confidence 99999999999999999999999999999999999999999999999999999875443333 678887 789999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCChhHHHHHHHHHHHHHHh
Q 004688 658 SLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 731 (737)
Q Consensus 658 ~l~~l~l~al~~gi~r~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p~~~~~~~~~~~~~~~~~ 731 (737)
+++++|++|+++|+++.+..+ +|+++++++|+++|++++++||++||++||+ |+|+++++||++||++|+++
T Consensus 630 TllilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~ll 703 (720)
T PF03552_consen 630 TLLILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLL 703 (720)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHH
Confidence 999999999999999988654 6889999999999999999999999999976 58999999999999999986
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=8.4e-74 Score=674.78 Aligned_cols=488 Identities=25% Similarity=0.331 Sum_probs=395.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCC-CCCCCceEE
Q 004688 21 KLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPAIDV 99 (737)
Q Consensus 21 r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~VdV 99 (737)
-+++++.+++.+.|++||++.|+|..+..+..++++++++|+++.+..+++.+..++|..|++ .+++. .+.+|+|||
T Consensus 187 ~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~--~~~~~~~~~~P~VsV 264 (852)
T PRK11498 187 LMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQP--VPLPKDMSLWPTVDI 264 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC--CCCCcccCCCCcEEE
Confidence 344555666678999999999999766667788889999999999888988888888887763 23333 457899999
Q ss_pred EEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccccc
Q 004688 100 FICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEA 179 (737)
Q Consensus 100 ~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~~ 179 (737)
+||| |||+.+++++|+.+++++|||++|++|||+|||++|.|.+ +|+++
T Consensus 265 iIPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~--------------la~~~-------------- 313 (852)
T PRK11498 265 FVPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ--------------FAQEV-------------- 313 (852)
T ss_pred EEec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH--------------HHHHC--------------
Confidence 9999 9999889999999999999999999999999999984421 11111
Q ss_pred ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccC
Q 004688 180 ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREK 259 (737)
Q Consensus 180 ~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k 259 (737)
++.|++|++
T Consensus 314 -----------------------------------------------------------------------~v~yI~R~~ 322 (852)
T PRK11498 314 -----------------------------------------------------------------------GVKYIARPT 322 (852)
T ss_pred -----------------------------------------------------------------------CcEEEEeCC
Confidence 246888876
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCC---
Q 004688 260 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHD--- 335 (737)
Q Consensus 260 ~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQtPq~f~n~~~~d--- 335 (737)
+ .|+||||+|+|+++ ++||||+++|||+++ +|++|++++++| .||+ +|+||+||.|+|.+.-.
T Consensus 323 n----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip-~pdfL~~~V~~f~~dP~----VglVQtp~~f~n~dp~~rnl 389 (852)
T PRK11498 323 H----EHAKAGNINNALKY----AKGEFVAIFDCDHVP-TRSFLQMTMGWFLKDKK----LAMMQTPHHFFSPDPFERNL 389 (852)
T ss_pred C----CcchHHHHHHHHHh----CCCCEEEEECCCCCC-ChHHHHHHHHHHHhCCC----eEEEEcceeccCCchHHHhh
Confidence 4 68999999999999 899999999999985 599999999876 6777 99999999999853210
Q ss_pred ----hHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCC
Q 004688 336 ----IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 411 (737)
Q Consensus 336 ----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 411 (737)
.+.++.+.||+.++.|.+.++++++||+++++||+++.
T Consensus 390 ~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe-------------------------------------- 431 (852)
T PRK11498 390 GRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD-------------------------------------- 431 (852)
T ss_pred HHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH--------------------------------------
Confidence 12245567899999999999999999999999999992
Q ss_pred ccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHH
Q 004688 412 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 491 (737)
Q Consensus 412 ~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~R 491 (737)
+.|||++++++||+++++++|++||+++|+++ +.+.|++|+|++++++||.|
T Consensus 432 --------------------------eVGGfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~R 483 (852)
T PRK11498 432 --------------------------EIGGIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIR 483 (852)
T ss_pred --------------------------HhcCCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHH
Confidence 24789999999999999999999999999986 68899999999999999999
Q ss_pred HhcchhhhHHhhcCCcccCCCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCccccccchhHHHHHHHHHH
Q 004688 492 WASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLS 571 (737)
Q Consensus 492 Wa~G~~qi~~~~~~pl~~~~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~~~ 571 (737)
|++|++|+++ ++||++. +++++.||++|+++++++ +.+++.++|+++|++|+++|+.++.+. +..+++ ++++
T Consensus 484 WarG~lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a~---~~~i~~-y~lP 555 (852)
T PRK11498 484 WARGMVQIFR-LDNPLTG--KGLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYAP---ALMIAL-FVLP 555 (852)
T ss_pred HHHHHHHHHH-HhChhcc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeCC---hHHHHH-HHHH
Confidence 9999999997 5799873 799999999999999999 999999999999999999999887542 222222 2234
Q ss_pred HHHHHHH-HHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccc
Q 004688 572 AICKHLQ-EVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSS 650 (737)
Q Consensus 572 ~~~~~ll-~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~ 650 (737)
+++...+ ....+|..+..||+|. +.++ .+++....++..++++++.+|+||||++..++ +.|+|+
T Consensus 556 ~~~~~~l~~~~~~g~~r~~~wsei----ye~v-~a~~l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~~~~~--- 621 (852)
T PRK11498 556 HMIHASLTNSRIQGKYRHSFWSEI----YETV-LAWYIAPPTTVALFNPHKGKFNVTAKGGLVEE------EYVDWV--- 621 (852)
T ss_pred HHHHHHHHHHHhcCcchHhHHHHH----HHHH-HHHHHHHHHHHHHcCccCCCcccCCCCccccc------cceehH---
Confidence 3333323 2233565666788873 3333 45555666777799999999999999976554 667764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 004688 651 VFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 714 (737)
Q Consensus 651 ~~~~P~~~l~~l~l~al~~gi~r~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p 714 (737)
+..|+++++++|++|+++|++|+..+. ....+.+|++|++|+++++...+.+.+-++..++-|
T Consensus 622 -~~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 622 -ISRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVRRSH 686 (852)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 677999999999999999999987643 234677999999999999998888887665544433
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=2.6e-73 Score=673.03 Aligned_cols=508 Identities=26% Similarity=0.334 Sum_probs=408.4
Q ss_pred HHHHHHHHHHH-HHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCCCCCCCceE
Q 004688 20 NKLHAFLHCIA-IALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID 98 (737)
Q Consensus 20 ~r~~~~~~~~~-~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~Vd 98 (737)
-|++.++..++ .+.|++||++.|+|..+.....++++++++|+++.+..+++.+..++|.+|+..+.+ .+++.+|+||
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~Vs 134 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTVD 134 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCeeE
Confidence 35555555444 589999999999997555666788899999999999888888888888877643322 1256789999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+++++++|+.+++++|||+|+++|+|+|||++|.|....-++++
T Consensus 135 ViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------- 186 (713)
T TIGR03030 135 VFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------- 186 (713)
T ss_pred EEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh-------------------------
Confidence 99999 99998899999999999999999999999999999987532211110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
+..+.+.++++..++ .++.|++|+
T Consensus 187 ----------~~~~~~~~~~~l~~~----------------------------------------------~~v~yi~r~ 210 (713)
T TIGR03030 187 ----------EAAQRREELKEFCRK----------------------------------------------LGVNYITRP 210 (713)
T ss_pred ----------hhhhhHHHHHHHHHH----------------------------------------------cCcEEEECC
Confidence 000011122222111 135799988
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCc---C
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNE---H 334 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~n~~~---~ 334 (737)
++ +|+||||||+|+++ ++||+|+++|||+++ +||+|++++++|. ||+ +|+||+||.|+|.+. +
T Consensus 211 ~n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~-~pd~L~~~v~~f~~dp~----v~~Vqtp~~f~~p~~~~~n 277 (713)
T TIGR03030 211 RN----VHAKAGNINNALKH----TDGELILIFDADHVP-TRDFLQRTVGWFVEDPK----LFLVQTPHFFVSPDPIERN 277 (713)
T ss_pred CC----CCCChHHHHHHHHh----cCCCEEEEECCCCCc-ChhHHHHHHHHHHhCCC----EEEEeCCeeccCCCHHhhh
Confidence 75 78999999999999 899999999999986 5999999999994 676 999999999988642 1
Q ss_pred ----ChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccC
Q 004688 335 ----DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 410 (737)
Q Consensus 335 ----d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 410 (737)
+.+.++.+.||..++.|.|.++++++||+|+++||++++
T Consensus 278 l~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~------------------------------------- 320 (713)
T TIGR03030 278 LGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALD------------------------------------- 320 (713)
T ss_pred hHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHH-------------------------------------
Confidence 233456778999999999999999999999999999992
Q ss_pred CccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhH
Q 004688 411 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 490 (737)
Q Consensus 411 ~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 490 (737)
+.|||++++++||++++++||++||+++|+++ +.+.|++|+|++++++||.
T Consensus 321 ---------------------------~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl~~~~~Qr~ 371 (713)
T TIGR03030 321 ---------------------------EIGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETLSGHIGQRI 371 (713)
T ss_pred ---------------------------HcCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCHHHHHHHHH
Confidence 24789999999999999999999999999986 6889999999999999999
Q ss_pred HHhcchhhhHHhhcCCcccCCCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCccccccchhHHHHHHHHH
Q 004688 491 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFL 570 (737)
Q Consensus 491 RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~~ 570 (737)
||++|++|+++ ..||++. +++++.||++|+++++|+ +++++.++|+++|++++++|++++++....++. .++
T Consensus 372 RWa~G~~qi~~-~~~pl~~--~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~~~~----~~l 443 (713)
T TIGR03030 372 RWAQGMMQIFR-LDNPLLK--RGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVASALEILA----YAL 443 (713)
T ss_pred HHhcChHHHHh-hhCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCCHHHHHH----HHH
Confidence 99999999998 4589884 799999999999999999 999999999999999999999998753222222 234
Q ss_pred HHHHHHHHHHH-HhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeecc
Q 004688 571 SAICKHLQEVI-STGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTS 649 (737)
Q Consensus 571 ~~~~~~ll~~~-~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~ 649 (737)
++++.+++.+. ..|..+..||++. +. +...++.+.+++.+++++++.+|+||||++..++ +. .
T Consensus 444 p~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~------~~-----~ 507 (713)
T TIGR03030 444 PHMLHSLLTNSYLFGRVRWPFWSEV----YE-TVLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDE------DY-----F 507 (713)
T ss_pred HHHHHHHHHHHHHcCCeecchHHHH----HH-HHHHHHHHHHHHHHHhCcCCCCceecCCCccccc------cc-----c
Confidence 55555555533 3566677899883 33 3366678888899999999999999999976543 11 2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCh
Q 004688 650 SVFLVPMVSLMILNVAALVCGVIRMIAVGN-WDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISP 715 (737)
Q Consensus 650 ~~~~~P~~~l~~l~l~al~~gi~r~~~~~~-~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p~ 715 (737)
+++++|++++++++++|+++|++|+..... ...+.+|++|++++++++...+.+.+.|+++++-|.
T Consensus 508 ~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~R 574 (713)
T TIGR03030 508 SPLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPR 574 (713)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCccc
Confidence 378999999999999999999999875332 356789999999999999999998888887776553
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=7.9e-39 Score=373.88 Aligned_cols=360 Identities=16% Similarity=0.128 Sum_probs=249.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccch--hhH---HHHHHHHHHHHHHHHHHHHHHhhheeccccCCC---CC--C
Q 004688 19 LNKLHAFLHCIAIALLIYYRASYLLQETRAI--SII---PWLLVFASELLLSFIWLLGRAYLWRPVSRTVFP---ER--L 88 (737)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~--~~~---~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~---~~--l 88 (737)
+.|++.++..++.+.|..|+....++..+.. ... +-.+++..+.+.+...+++.+...+ .|+..+ +. -
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 5788888888888999999999988753221 111 1123334455554445555444322 121111 10 0
Q ss_pred CCCCCCCceEEEEecCCCCCCchHH----HHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhh
Q 004688 89 PEDDKLPAIDVFICTADPEKEPTFG----VMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRR 164 (737)
Q Consensus 89 ~~~~~~P~VdV~Vpt~~pynEp~~~----v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~ 164 (737)
+.....|+|+|+||+ |||+++. ++.|++|+.+++||. +++|+|+|||++|.|.. .|
T Consensus 118 ~~~~~~~~VaVliP~---yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~--~e-------------- 177 (691)
T PRK05454 118 PPPPPEARTAILMPI---YNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAA--AE-------------- 177 (691)
T ss_pred CCCCCCCceEEEEeC---CCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHH--HH--------------
Confidence 113457999999999 9999864 555666677799985 69999999999985421 00
Q ss_pred cccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhc
Q 004688 165 YRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQA 244 (737)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 244 (737)
. +.+++++++.
T Consensus 178 -----------------------------~----~~~~~L~~~~------------------------------------ 188 (691)
T PRK05454 178 -----------------------------E----AAWLELRAEL------------------------------------ 188 (691)
T ss_pred -----------------------------H----HHHHHHHHhc------------------------------------
Confidence 0 1122222111
Q ss_pred cccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEc
Q 004688 245 DLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQ 323 (737)
Q Consensus 245 ~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ 323 (737)
...+++.|.+|++| .+.||||+|++++..+ .++|||+++|||++++ ||++++++++|. ||+ +|.||
T Consensus 189 --~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP~----vGlVQ 255 (691)
T PRK05454 189 --GGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANPR----AGLIQ 255 (691)
T ss_pred --CCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCcC----EEEEe
Confidence 01135788888765 6789999999999866 6789999999999976 999999999986 776 99999
Q ss_pred cCceeccCCcCChHHHHHH----HhhhhHHhHhhhcC--CcccccccceeehhhccCCccccccchHhhHhhhcCchhHH
Q 004688 324 FPQKFHNFNEHDIYDGSLR----SGYRLQWPGMDGLK--GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFI 397 (737)
Q Consensus 324 tPq~f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~--~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~ 397 (737)
+++.+.|.+ ..++.-+. ++......|.+.|+ ...|+|+|+++||+|+....
T Consensus 256 t~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~--------------------- 312 (691)
T PRK05454 256 TLPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHC--------------------- 312 (691)
T ss_pred CCccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhc---------------------
Confidence 999988853 34543322 23334567777765 45689999999999994200
Q ss_pred HhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEec
Q 004688 398 KSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGT 477 (737)
Q Consensus 398 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~ 477 (737)
.. ......+||.+++++||+++|.+|+++|||++|+++. +.++++
T Consensus 313 -------------------------------gl---p~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~-~~~~ee 357 (691)
T PRK05454 313 -------------------------------GL---PPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL-PGSYEE 357 (691)
T ss_pred -------------------------------CC---ccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc-cccccc
Confidence 00 0000236788999999999999999999999999862 568999
Q ss_pred cCCCHHHHHHHhHHHhcchhhhHHhhcCCcccCCCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHH
Q 004688 478 STTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLC 546 (737)
Q Consensus 478 aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ 546 (737)
+|+|+.++++||.||++|++|.+.. ++ .+++++.+|+.|++..+.++..+++.+++++.|++.
T Consensus 358 ~P~tl~~~~~qr~RW~~G~lQ~l~~----l~--~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 358 LPPNLLDELKRDRRWCQGNLQHLRL----LL--AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred CCCCHHHHHHHHHHHHhchHHHHHH----HH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998852 22 378999999998876555523233334444444433
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=2.6e-35 Score=332.57 Aligned_cols=230 Identities=19% Similarity=0.197 Sum_probs=184.3
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004688 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (737)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r 170 (737)
.+..|+|+|+||+ |||+ ..+.+|+.++++++||+ ++|+|+|||++|.|.+.+.+..+
T Consensus 71 ~~~~p~vsViIP~---yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~----------------- 127 (444)
T PRK14583 71 LKGHPLVSILVPC---FNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLA----------------- 127 (444)
T ss_pred cCCCCcEEEEEEe---CCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 3457999999999 9999 57899999999999995 89999999999977653332110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccC
Q 004688 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMP 250 (737)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P 250 (737)
..|
T Consensus 128 -----------------------------------------------------------------------------~~~ 130 (444)
T PRK14583 128 -----------------------------------------------------------------------------EDP 130 (444)
T ss_pred -----------------------------------------------------------------------------hCC
Confidence 012
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceec
Q 004688 251 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFH 329 (737)
Q Consensus 251 ~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~ 329 (737)
++.++.+++ +++||+|+|.|++. +++|+++++|||+++ +||++++++..|. ||+ +|.||+.....
T Consensus 131 ~v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~-~~d~L~~lv~~~~~~~~----~g~v~g~~~~~ 196 (444)
T PRK14583 131 RLRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALL-DKNAVPYLVAPLIANPR----TGAVTGNPRIR 196 (444)
T ss_pred CEEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCc-CHHHHHHHHHHHHhCCC----eEEEEccceec
Confidence 345555443 45799999999998 899999999999986 5999999998775 555 99999987766
Q ss_pred cCCcCChHHH----HHHHhhhhHHhHhhhcCCccc-ccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhc
Q 004688 330 NFNEHDIYDG----SLRSGYRLQWPGMDGLKGPFL-TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSY 404 (737)
Q Consensus 330 n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~ 404 (737)
|. +..++. +...+++.+.++.+..+..++ +|+++.+||+++.
T Consensus 197 ~~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~------------------------------- 243 (444)
T PRK14583 197 TR--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALA------------------------------- 243 (444)
T ss_pred CC--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHH-------------------------------
Confidence 53 222322 333445556666666666553 6899999999992
Q ss_pred cccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHH
Q 004688 405 EHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLND 484 (737)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~ 484 (737)
+.|||+.++++||++++++++.+||++.|+++ +.++++.|+|+++
T Consensus 244 ---------------------------------~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~ 288 (444)
T PRK14583 244 ---------------------------------DVGYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRG 288 (444)
T ss_pred ---------------------------------HcCCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHH
Confidence 24789999999999999999999999999986 7899999999999
Q ss_pred HHHHhHHHhcchhhhHHh
Q 004688 485 VLIQGTRWASGLIDVSIS 502 (737)
Q Consensus 485 ~~~Qr~RWa~G~~qi~~~ 502 (737)
+++||.||++|.+|++++
T Consensus 289 ~~~Qr~RW~~G~~~~~~~ 306 (444)
T PRK14583 289 LWKQRLRWAQGGAEVFLK 306 (444)
T ss_pred HHHHHHHHhCcHHHHHHH
Confidence 999999999999999974
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.5e-36 Score=318.17 Aligned_cols=242 Identities=16% Similarity=0.188 Sum_probs=183.8
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHc----CCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004688 97 IDVFICTADPEKEPTFGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (737)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~l~----~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p 172 (737)
|+|+||+ |||+++++.+|+.+..+ +||+. +++|+|+|||+++....
T Consensus 1 ~SIliP~---~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~~-------------------------- 50 (254)
T cd04191 1 TAIVMPV---YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIWL-------------------------- 50 (254)
T ss_pred CEEEEeC---CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHHH--------------------------
Confidence 6899999 99999989999999875 56633 49999999999872110
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcE
Q 004688 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLL 252 (737)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (737)
.+...+ ++++++. ...+++
T Consensus 51 -------------------~~~~~~----~~l~~~~--------------------------------------~~~~~v 69 (254)
T cd04191 51 -------------------AEEAAW----LDLCEEL--------------------------------------GAQGRI 69 (254)
T ss_pred -------------------HHHHHH----HHHHHHh--------------------------------------CCCCcE
Confidence 011111 1111110 013468
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccC
Q 004688 253 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNF 331 (737)
Q Consensus 253 ~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~n~ 331 (737)
+|++|+++ .|.||||||+++...+ +++|+|+++|||++++ |++|.+++.+|. ||+ +|.||+|+.+.|.
T Consensus 70 ~~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~~----vg~vq~~~~~~n~ 138 (254)
T cd04191 70 YYRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANPR----AGIIQTAPKLIGA 138 (254)
T ss_pred EEEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCCC----EEEEeCCceeECC
Confidence 99999885 6899999999998643 6789999999999865 999999999996 877 9999999999986
Q ss_pred CcCChHHHH----HHHhhhhHHhHhhhcCC--cccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcc
Q 004688 332 NEHDIYDGS----LRSGYRLQWPGMDGLKG--PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 405 (737)
Q Consensus 332 ~~~d~~~~~----~~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~ 405 (737)
+ ..+.+- ...|...++.|++.|++ .+|+|+++++||+||....
T Consensus 139 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~----------------------------- 187 (254)
T cd04191 139 E--TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHC----------------------------- 187 (254)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhc-----------------------------
Confidence 3 233322 23455667788877643 6789999999999994200
Q ss_pred ccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHH
Q 004688 406 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 485 (737)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~ 485 (737)
.. ...|..+||.+++++||+++|++++.+||+++|.++. ..+++++|+|++++
T Consensus 188 -----------------------~~---~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~~~~~~ 240 (254)
T cd04191 188 -----------------------AL---PVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPPTLIDF 240 (254)
T ss_pred -----------------------CC---ccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCCCHHHH
Confidence 00 0011235788899999999999999999999999863 34689999999999
Q ss_pred HHHhHHHhcchhh
Q 004688 486 LIQGTRWASGLID 498 (737)
Q Consensus 486 ~~Qr~RWa~G~~q 498 (737)
++||.||++|++|
T Consensus 241 ~~qr~RW~~G~~q 253 (254)
T cd04191 241 LKRDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHHHhhcCc
Confidence 9999999999998
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=5.6e-35 Score=327.28 Aligned_cols=233 Identities=25% Similarity=0.312 Sum_probs=181.3
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004688 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (737)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~ 173 (737)
+|.|||+||+ |||+++++++|+.+++++|||. ++|+|+|||++|.|.+.+.| ++.+
T Consensus 53 ~p~vsviiP~---ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~--------------~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPA---YNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEE--------------LGAE----- 108 (439)
T ss_pred CCceEEEEec---CCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHH--------------HHhh-----
Confidence 5999999999 9999889999999999999998 88999999999976543222 1110
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEE
Q 004688 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLV 253 (737)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (737)
+ + |.+.
T Consensus 109 ---------------------------~----------------------~-------------------------~~~~ 114 (439)
T COG1215 109 ---------------------------Y----------------------G-------------------------PNFR 114 (439)
T ss_pred ---------------------------c----------------------C-------------------------cceE
Confidence 0 0 1111
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCc
Q 004688 254 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNE 333 (737)
Q Consensus 254 yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~ 333 (737)
-+..++ ++++|++|+|.|++. +++|+|+++|||+++ +||+|++++..|.|+.. .|.+|+|+.+.+.+.
T Consensus 115 ~~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~-~~d~l~~~~~~f~~~~~---~~v~~~~~~~~~~~~ 182 (439)
T COG1215 115 VIYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVP-EPDALRELVSPFEDPPV---GAVVGTPRIRNRPDP 182 (439)
T ss_pred EEeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCC-ChhHHHHHHhhhcCCCe---eEEeCCceeeecCCh
Confidence 221112 378999999999999 889999999999986 59999999999998762 478999998776421
Q ss_pred CChHHHHHHH-----hhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccc
Q 004688 334 HDIYDGSLRS-----GYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKN 408 (737)
Q Consensus 334 ~d~~~~~~~~-----f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~ 408 (737)
....+..+.. ++.....+.+.....+++|++.++||++|.
T Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~----------------------------------- 227 (439)
T COG1215 183 SNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALE----------------------------------- 227 (439)
T ss_pred hhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHH-----------------------------------
Confidence 1122222222 221222222332467789999999999992
Q ss_pred cCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHH
Q 004688 409 VNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQ 488 (737)
Q Consensus 409 ~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Q 488 (737)
+.+||..+++|||.++++++|.+|||+.|+++ +.+++++|+|+.++++|
T Consensus 228 -----------------------------~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Q 276 (439)
T COG1215 228 -----------------------------EVGGWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQ 276 (439)
T ss_pred -----------------------------HhCCCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHH
Confidence 24679999999999999999999999999996 68999999999999999
Q ss_pred hHHHhcchhhhHHh
Q 004688 489 GTRWASGLIDVSIS 502 (737)
Q Consensus 489 r~RWa~G~~qi~~~ 502 (737)
|.||++|++|++..
T Consensus 277 r~RW~~g~~~~~~~ 290 (439)
T COG1215 277 RLRWARGGLQVLLL 290 (439)
T ss_pred HHHHHcccceeeeh
Confidence 99999999999973
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=3e-33 Score=313.16 Aligned_cols=230 Identities=22% Similarity=0.261 Sum_probs=181.7
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004688 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (737)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r 170 (737)
.+..|.|+|+||+ |||+ +.+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+..
T Consensus 50 ~~~~p~vsViIp~---yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~------------------ 105 (420)
T PRK11204 50 LKEYPGVSILVPC---YNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLA------------------ 105 (420)
T ss_pred cCCCCCEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHH------------------
Confidence 4567999999999 9998 78999999999999994 8999999999997754332111
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccC
Q 004688 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMP 250 (737)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P 250 (737)
...|
T Consensus 106 ----------------------------------------------------------------------------~~~~ 109 (420)
T PRK11204 106 ----------------------------------------------------------------------------AQIP 109 (420)
T ss_pred ----------------------------------------------------------------------------HhCC
Confidence 0123
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceec
Q 004688 251 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFH 329 (737)
Q Consensus 251 ~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~ 329 (737)
++.++.+++ +.+||+|+|.|++. +++|+++++|||+++ +||+|.+++..|. ||+ ++.||+.....
T Consensus 110 ~v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~-~~d~L~~l~~~~~~~~~----v~~v~g~~~~~ 175 (420)
T PRK11204 110 RLRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALL-DPDAAAYMVEHFLHNPR----VGAVTGNPRIR 175 (420)
T ss_pred cEEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCC-ChhHHHHHHHHHHhCCC----eEEEECCceec
Confidence 456776554 46799999999999 899999999999986 5999999999984 665 99999987776
Q ss_pred cCCcCChHHHHH----HHhhhhHHhHhhhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhc
Q 004688 330 NFNEHDIYDGSL----RSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSY 404 (737)
Q Consensus 330 n~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~ 404 (737)
|. +...+..+ ...+.....+....+... .+|+++++||+++.
T Consensus 176 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~------------------------------- 222 (420)
T PRK11204 176 NR--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALH------------------------------- 222 (420)
T ss_pred cc--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHH-------------------------------
Confidence 53 22222222 222233333333344443 36888999999992
Q ss_pred cccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHH
Q 004688 405 EHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLND 484 (737)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~ 484 (737)
+.+||+++.++||++++++++++||++.|+++ +.++++.|+|+++
T Consensus 223 ---------------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~ 267 (420)
T PRK11204 223 ---------------------------------EVGYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKG 267 (420)
T ss_pred ---------------------------------HhCCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHH
Confidence 24789999999999999999999999999986 7899999999999
Q ss_pred HHHHhHHHhcchhhhHHh
Q 004688 485 VLIQGTRWASGLIDVSIS 502 (737)
Q Consensus 485 ~~~Qr~RWa~G~~qi~~~ 502 (737)
+.+||.||++|++|.++.
T Consensus 268 ~~~Qr~RW~~G~~~~l~~ 285 (420)
T PRK11204 268 LWKQRLRWAQGGAEVLLK 285 (420)
T ss_pred HHHHHHHHhcCHHHHHHH
Confidence 999999999999999984
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=1.2e-33 Score=318.51 Aligned_cols=282 Identities=17% Similarity=0.191 Sum_probs=202.0
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004688 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (737)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r 170 (737)
++..|+|+|+||+ |||+ +.+.+|+.++++++||.++++|+|+|||++|.|.+.+.+..+
T Consensus 45 ~~~~P~vsVIIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------------- 103 (439)
T TIGR03111 45 IGKLPDITIIIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------------- 103 (439)
T ss_pred cCCCCCEEEEEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 3568999999999 9999 799999999999999999999999999999988654433210
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccC
Q 004688 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMP 250 (737)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P 250 (737)
..|
T Consensus 104 -----------------------------------------------------------------------------~~~ 106 (439)
T TIGR03111 104 -----------------------------------------------------------------------------EFP 106 (439)
T ss_pred -----------------------------------------------------------------------------hCC
Confidence 001
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceec
Q 004688 251 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFH 329 (737)
Q Consensus 251 ~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~ 329 (737)
++..+..++ ++|||+|+|.|++. ++||+|+++|||+++ +||++++++..|. ||+ ++.|++.+.-.
T Consensus 107 ~v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~-~~d~L~~l~~~f~~~~~----v~~v~g~~~~~ 172 (439)
T TIGR03111 107 GLSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKL-HKDAIKNMVTRFENNPD----IHAMTGVILTD 172 (439)
T ss_pred CeEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCc-ChHHHHHHHHHHHhCCC----eEEEEeEEecC
Confidence 121211122 47999999999999 899999999999986 5999999999886 565 77665543221
Q ss_pred cC--Cc-CCh---HHHHHHHhhhhHH---hHh---hhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhH
Q 004688 330 NF--NE-HDI---YDGSLRSGYRLQW---PGM---DGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLF 396 (737)
Q Consensus 330 n~--~~-~d~---~~~~~~~f~~~~~---~g~---d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~ 396 (737)
.. +. ... +..+.. +++..+ .|+ ...+..+ .+|+++++||+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~----------------------- 228 (439)
T TIGR03111 173 KELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETIL----------------------- 228 (439)
T ss_pred chhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHH-----------------------
Confidence 10 00 000 111111 122111 111 1122333 45788889999982
Q ss_pred HHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHH-CCCEEEEeCCCCCeeE
Q 004688 397 IKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC-KGWTSTYLDPSRPQFL 475 (737)
Q Consensus 397 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~-~Gwrs~y~~~~~~~~~ 475 (737)
+.+||+.++++||++++++++. .|+|+.|+++ +.++
T Consensus 229 -----------------------------------------~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~ 265 (439)
T TIGR03111 229 -----------------------------------------KTQLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFY 265 (439)
T ss_pred -----------------------------------------HhCCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEE
Confidence 2478999999999999999985 6999999986 7899
Q ss_pred eccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccCCCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCcc
Q 004688 476 GTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLY 554 (737)
Q Consensus 476 g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~ 554 (737)
.++|+|++++++||.||++|.+|++....++... .+.++.++..+....... ...+|.+++.++++++.++|.++.
T Consensus 266 ~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 266 VDPIDGLNKLYTQRQRWQRGELEVSHMFFESANK--SIKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred EECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh--chhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999999999999999999743333331 345566666554433444 557788888889999888887654
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=3.4e-30 Score=292.22 Aligned_cols=263 Identities=18% Similarity=0.161 Sum_probs=182.5
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHH-HcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004688 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSA-MALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (737)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~-l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r 170 (737)
...|+|+|+||+ |||+ +++.+||.++ .++||| +++|+|+||+++|.|.+.+.+.++
T Consensus 63 ~~~p~vaIlIPA---~NE~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~~----------------- 119 (504)
T PRK14716 63 VPEKRIAIFVPA---WREA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLAA----------------- 119 (504)
T ss_pred CCCCceEEEEec---cCch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 458999999999 9999 7999999986 578996 499999999999987654432210
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccC
Q 004688 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMP 250 (737)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P 250 (737)
+ +|
T Consensus 120 ---------------------------------------------------~--------------------------~p 122 (504)
T PRK14716 120 ---------------------------------------------------R--------------------------YP 122 (504)
T ss_pred ---------------------------------------------------H--------------------------CC
Confidence 1 12
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcC--CCCCC---CEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004688 251 LLVYVSREKSPEHLHHFKGGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 325 (737)
Q Consensus 251 ~l~yi~R~k~p~~~~~~KAGaLN~al~~s~--~~s~g---e~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtP 325 (737)
+++.+. .+++| .++||+|||.+++... ...+| |+|+++|||+++ +|++|+.....+.| .++||.|
T Consensus 123 ~v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v-~Pd~Lr~~~~~~~~------~~~VQ~p 192 (504)
T PRK14716 123 RVHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVI-HPLELRLYNYLLPR------HDFVQLP 192 (504)
T ss_pred CeEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCc-CccHHHHHHhhcCC------CCEEecc
Confidence 222222 12222 3689999999997621 00244 999999999986 59999876555443 5689999
Q ss_pred ceeccCCcCCh----HHHHHHHhhhhHHhHhhhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhHHHhh
Q 004688 326 QKFHNFNEHDI----YDGSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSL 400 (737)
Q Consensus 326 q~f~n~~~~d~----~~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~ 400 (737)
....+.+.... |..+....+...+..++.++++. ++|+|+++||++|. ++
T Consensus 193 v~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe-----------~l-------------- 247 (504)
T PRK14716 193 VFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALE-----------RL-------------- 247 (504)
T ss_pred eeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHH-----------HH--------------
Confidence 87655432222 22222222333456678888765 67999999999992 11
Q ss_pred hhhccccccCCccchhhHHHhhhhhccccccccccccccc-cccCCCccchHHHHHHHHHCCCEEEEeCCCC--------
Q 004688 401 HQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSR-------- 471 (737)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~-G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~-------- 471 (737)
.++ ..| +|+++++|||+++|++++.+|||++|++...
T Consensus 248 ------------------~~~----------------~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~ 293 (504)
T PRK14716 248 ------------------AAE----------------RGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPD 293 (504)
T ss_pred ------------------Hhh----------------cCCCCCCCCCcchHHHHHHHHHHCCCEEEEecccccccccccc
Confidence 000 013 3999999999999999999999999998621
Q ss_pred -----CeeEeccCCCHHHHHHHhHHHhcch-hhhHHhhc---CCcccCCCCCchHHHHHHHHHh
Q 004688 472 -----PQFLGTSTTNLNDVLIQGTRWASGL-IDVSISRF---CPLLYGPSRMSLLLSMCYGEMS 526 (737)
Q Consensus 472 -----~~~~g~aP~tl~~~~~Qr~RWa~G~-~qi~~~~~---~pl~~~~~~L~~~qrl~Y~~~~ 526 (737)
...++++|+|++++++||.||+.|. +|... +. .++. .+.+.+++|..-+...
T Consensus 294 ~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~-~~gw~~~~~--~~~~~~rdr~~~~~~~ 354 (504)
T PRK14716 294 RRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWE-RLGWKGPAA--TKYMLWRDRKGLLTNL 354 (504)
T ss_pred cccccccccccCccCHHHHHHHHHHHHhchHHhhHH-hcCCCCchh--hhhhHHHHHHHHHHHH
Confidence 1245889999999999999999995 78764 22 1111 2446677887766543
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=2.7e-30 Score=265.40 Aligned_cols=227 Identities=25% Similarity=0.351 Sum_probs=174.9
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004688 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (737)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (737)
|+|+|+||+ |||+ +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+..+
T Consensus 1 p~vSViIp~---yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPV---FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEec---CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 689999999 9998 799999999999999998999999998 88878765443211
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEE
Q 004688 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVY 254 (737)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~y 254 (737)
++.+ ..+++.+
T Consensus 55 -------------------------~~~~--------------------------------------------~~~~i~~ 65 (232)
T cd06437 55 -------------------------EYAA--------------------------------------------QGVNIKH 65 (232)
T ss_pred -------------------------HHhh--------------------------------------------cCCceEE
Confidence 0000 0124566
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcC
Q 004688 255 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEH 334 (737)
Q Consensus 255 i~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~ 334 (737)
+.+.++ +++|++|+|.|++. ++||+|+++|||++++ |++|+++..++.|++ +|+||++..+.|.+.+
T Consensus 66 ~~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~~~ 132 (232)
T cd06437 66 VRRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADPK----LGFVQTRWGHINANYS 132 (232)
T ss_pred EECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCCC----eEEEecceeeEcCCCc
Confidence 666553 56799999999999 8999999999999965 999999888887776 9999987766554221
Q ss_pred ChHHHH----HHHhhhhHHhHhhhcCCc-ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccccc
Q 004688 335 DIYDGS----LRSGYRLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 409 (737)
Q Consensus 335 d~~~~~----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~ 409 (737)
.+... ...++...+.+....+.. ..+|+++++||+++.
T Consensus 133 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------ 175 (232)
T cd06437 133 -LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIE------------------------------------ 175 (232)
T ss_pred -hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHH------------------------------------
Confidence 22111 111233333344333333 257999999999982
Q ss_pred CCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHh
Q 004688 410 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQG 489 (737)
Q Consensus 410 ~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr 489 (737)
+.+||+..+..||+++++|++.+||+..|+++ +.+++..|+|+.++++||
T Consensus 176 ----------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~ 225 (232)
T cd06437 176 ----------------------------DAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQ 225 (232)
T ss_pred ----------------------------HhCCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHH
Confidence 24689988899999999999999999999986 689999999999999999
Q ss_pred HHHhcch
Q 004688 490 TRWASGL 496 (737)
Q Consensus 490 ~RWa~G~ 496 (737)
+||++|.
T Consensus 226 ~rW~~g~ 232 (232)
T cd06437 226 HRWSKGP 232 (232)
T ss_pred HHhccCC
Confidence 9999984
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=8.2e-30 Score=260.19 Aligned_cols=229 Identities=37% Similarity=0.533 Sum_probs=185.0
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004688 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (737)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (737)
|+|+|+||+ |||+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsviip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~----------------------- 54 (234)
T cd06421 1 PTVDVFIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAEL----------------------- 54 (234)
T ss_pred CceEEEEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHh-----------------------
Confidence 789999999 999878999999999999999999999999999998664322110
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEE
Q 004688 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVY 254 (737)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~y 254 (737)
.. . .++.+
T Consensus 55 ------------------------------~~-----------------------------------------~-~~~~~ 62 (234)
T cd06421 55 ------------------------------GV-----------------------------------------E-YGYRY 62 (234)
T ss_pred ------------------------------hc-----------------------------------------c-cCceE
Confidence 00 0 01345
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC-CCCCCceEEEccCceeccCCc
Q 004688 255 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-PKTSSSLAFVQFPQKFHNFNE 333 (737)
Q Consensus 255 i~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D-~~~~~~vg~VQtPq~f~n~~~ 333 (737)
+.++++ .++|+||+|.|++. ++||+|+++|+|.+++ |+++.+++..|.+ ++ ++.|++++.+.+.+.
T Consensus 63 ~~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~----~~~v~~~~~~~~~~~ 129 (234)
T cd06421 63 LTRPDN----RHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLDDPK----VALVQTPQFFYNPDP 129 (234)
T ss_pred EEeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhcCCC----eEEEecceEEecCCc
Confidence 555543 67899999999998 8999999999999975 9999999999975 55 999999988876543
Q ss_pred CC----hHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccccc
Q 004688 334 HD----IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 409 (737)
Q Consensus 334 ~d----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~ 409 (737)
.+ .+......++..+..+.+.++...++|++.++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~------------------------------------ 173 (234)
T cd06421 130 FDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALD------------------------------------ 173 (234)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHH------------------------------------
Confidence 21 22333445555666666666677888999999999982
Q ss_pred CCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHh
Q 004688 410 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQG 489 (737)
Q Consensus 410 ~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr 489 (737)
+.+||+...+.||++++++++++||++.|.++ +.+.+..|+++..+++||
T Consensus 174 ----------------------------~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~ 223 (234)
T cd06421 174 ----------------------------EIGGFPTDSVTEDLATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQR 223 (234)
T ss_pred ----------------------------HhCCCCccceeccHHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHH
Confidence 24678888899999999999999999999997 678999999999999999
Q ss_pred HHHhcchhhhH
Q 004688 490 TRWASGLIDVS 500 (737)
Q Consensus 490 ~RWa~G~~qi~ 500 (737)
.||.+|++|++
T Consensus 224 ~rw~~~~~~~~ 234 (234)
T cd06421 224 LRWARGMLQIL 234 (234)
T ss_pred HHHhcCCeeeC
Confidence 99999999864
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=1.1e-27 Score=281.86 Aligned_cols=240 Identities=18% Similarity=0.205 Sum_probs=172.7
Q ss_pred CCCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhc
Q 004688 87 RLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRY 165 (737)
Q Consensus 87 ~l~~~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l-~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~ 165 (737)
.++ +++.|+|+|+||+ |||+ .++.+|+.+++ ++|||+ ++|+|+||++++.|.+++.+..
T Consensus 56 ~l~-~~~~~~vsIlVPa---~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~------------- 115 (727)
T PRK11234 56 ELY-KPDEKPLAIMVPA---WNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC------------- 115 (727)
T ss_pred hcc-cCCCCCEEEEEec---Ccch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH-------------
Confidence 344 4567999999999 9999 79999999987 799997 8999999888887764333211
Q ss_pred ccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhcc
Q 004688 166 RIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQAD 245 (737)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 245 (737)
+.
T Consensus 116 ---------------------------------~~--------------------------------------------- 117 (727)
T PRK11234 116 ---------------------------------AR--------------------------------------------- 117 (727)
T ss_pred ---------------------------------HH---------------------------------------------
Confidence 00
Q ss_pred ccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCC-----CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceE
Q 004688 246 LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLA 320 (737)
Q Consensus 246 ~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~-----s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg 320 (737)
+|++..+.-+ ++| .++||+|||+++...-.. ...++++++|||.++ +|++|+ .+.++.++ .+
T Consensus 118 ---~p~~~~v~~~-~~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v-~pd~L~-~~~~l~~~-----~~ 184 (727)
T PRK11234 118 ---FPNVHKVVCA-RPG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVI-SPMELR-LFNYLVER-----KD 184 (727)
T ss_pred ---CCCcEEEEeC-CCC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCC-ChhHHH-HHHhhcCC-----CC
Confidence 1222222211 233 468999999999873100 234678889999986 599997 67777754 28
Q ss_pred EEccCceeccCCcCChH----HHHHHHhhhhHHhHhhhcCCcc-cccccceeehh---hccCCccccccchHhhHhhhcC
Q 004688 321 FVQFPQKFHNFNEHDIY----DGSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRE---SLYGNFKHKGIDLAELKDTFGE 392 (737)
Q Consensus 321 ~VQtPq~f~n~~~~d~~----~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~---AL~~~~~~~~~d~~~~~~~~~~ 392 (737)
+||.|....+.+.+... ..+....+...+++++.++++. +.|+|+.|+|+ +|.
T Consensus 185 ~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~------------------- 245 (727)
T PRK11234 185 LIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALL------------------- 245 (727)
T ss_pred eEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHH-------------------
Confidence 99999764332212222 2333334446678888887665 56999999444 341
Q ss_pred chhHHHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccc---cccCCCccchHHHHHHHHHCCCEEEEeCC
Q 004688 393 SNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV---GFSYQSVSEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 393 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~---G~~~~sltED~~t~~~l~~~Gwrs~y~~~ 469 (737)
+.| ||+.+++|||+++|++|+.+||++.|++.
T Consensus 246 ---------------------------------------------~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~ 280 (727)
T PRK11234 246 ---------------------------------------------EDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRF 280 (727)
T ss_pred ---------------------------------------------HhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEccc
Confidence 123 59999999999999999999999999982
Q ss_pred C---------------------CCeeEeccCCCHHHHHHHhHHHhcc-hhhhHH
Q 004688 470 S---------------------RPQFLGTSTTNLNDVLIQGTRWASG-LIDVSI 501 (737)
Q Consensus 470 ~---------------------~~~~~g~aP~tl~~~~~Qr~RWa~G-~~qi~~ 501 (737)
. ...+++..|+|+++.++||.||..| .+|.+.
T Consensus 281 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 281 PVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred ccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 1 1347889999999999999999999 588764
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.96 E-value=6.3e-29 Score=257.33 Aligned_cols=231 Identities=24% Similarity=0.293 Sum_probs=177.7
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004688 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (737)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (737)
|.|+|+||+ |||+ +.+.+|+.|+++++||.++++|+|+|||++|.|.+.+.+...
T Consensus 1 p~vsIiIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~--------------------- 55 (241)
T cd06427 1 PVYTILVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRL--------------------- 55 (241)
T ss_pred CeEEEEEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhcc---------------------
Confidence 789999999 9998 799999999999999988999999999999977643221100
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEE
Q 004688 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVY 254 (737)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~y 254 (737)
....++++
T Consensus 56 ------------------------------------------------------------------------~~~~~i~~ 63 (241)
T cd06427 56 ------------------------------------------------------------------------PSIFRVVV 63 (241)
T ss_pred ------------------------------------------------------------------------CCCeeEEE
Confidence 00012334
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcC
Q 004688 255 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEH 334 (737)
Q Consensus 255 i~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~ 334 (737)
+...+ ..+|++|+|.|++. ++||+|+++|+|++++ |+++.+++.+|.+. +.+++++|++..+.|...+
T Consensus 64 ~~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~ 131 (241)
T cd06427 64 VPPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPLNYYNAREN 131 (241)
T ss_pred ecCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCcc
Confidence 33222 46899999999999 8999999999999975 99999999988631 1349999998877764221
Q ss_pred ChHH----HHHHHhhhhHHhHhhhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccccc
Q 004688 335 DIYD----GSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 409 (737)
Q Consensus 335 d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~ 409 (737)
... .+....++...++....+... ++|++.++||+++.
T Consensus 132 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------ 174 (241)
T cd06427 132 -WLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLR------------------------------------ 174 (241)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHH------------------------------------
Confidence 111 122233444455555555554 46888899999982
Q ss_pred CCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHh
Q 004688 410 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQG 489 (737)
Q Consensus 410 ~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr 489 (737)
+.+||+....+||++.++|++++|||+.+++. ..++..|+|++++++||
T Consensus 175 ----------------------------~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~ 223 (241)
T cd06427 175 ----------------------------ELGGWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQR 223 (241)
T ss_pred ----------------------------HcCCCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHH
Confidence 24678887889999999999999999999974 45789999999999999
Q ss_pred HHHhcchhhhHHh
Q 004688 490 TRWASGLIDVSIS 502 (737)
Q Consensus 490 ~RWa~G~~qi~~~ 502 (737)
.||+.|.+|++..
T Consensus 224 ~Rw~~g~~~~~~~ 236 (241)
T cd06427 224 SRWIKGYMQTWLV 236 (241)
T ss_pred HHHhccHHHHHHH
Confidence 9999999999973
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=6.7e-28 Score=247.56 Aligned_cols=229 Identities=24% Similarity=0.327 Sum_probs=171.1
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004688 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (737)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (737)
+|+||+ |||+++.+.+++.++++++||. .+|+|+|||++|.|.....+.. |++
T Consensus 1 siiip~---~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~---------~~~------------- 53 (236)
T cd06435 1 SIHVPC---YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAH---------CAQ------------- 53 (236)
T ss_pred CeeEee---CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHH---------HHH-------------
Confidence 589999 9998789999999999999996 7899999999997642111100 000
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEec
Q 004688 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSR 257 (737)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R 257 (737)
+ + +++.++..
T Consensus 54 -----------------------~-------------~----------------------------------~~i~~i~~ 63 (236)
T cd06435 54 -----------------------L-------------G----------------------------------ERFRFFHV 63 (236)
T ss_pred -----------------------h-------------C----------------------------------CcEEEEEc
Confidence 0 0 12445555
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChH
Q 004688 258 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIY 337 (737)
Q Consensus 258 ~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~ 337 (737)
+++ .++|+||+|.|++.+. .++|+|+++|+|.+++ |++|.+++..|.+++ ++.|+++..+.+.. ..++
T Consensus 64 ~~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~-~~~~ 131 (236)
T cd06435 64 EPL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDPR----VGFVQAPQDYRDGE-ESLF 131 (236)
T ss_pred CCC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCCC----eeEEecCccccCCC-ccHH
Confidence 443 4679999999999842 3589999999999875 999999999987665 99999887665431 2233
Q ss_pred HHHH----HHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCcc
Q 004688 338 DGSL----RSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 413 (737)
Q Consensus 338 ~~~~----~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 413 (737)
.... ..++......+...+..++.|+++++||+++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------------- 171 (236)
T cd06435 132 KRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALD---------------------------------------- 171 (236)
T ss_pred HHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHH----------------------------------------
Confidence 2111 11122112222333344567888999999982
Q ss_pred chhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHh
Q 004688 414 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 493 (737)
Q Consensus 414 ~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa 493 (737)
+.+||+.....||++++++++++||+..|+++ +..++..|+++.++.+||.||+
T Consensus 172 ------------------------~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~ 225 (236)
T cd06435 172 ------------------------DVGGWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWA 225 (236)
T ss_pred ------------------------HhCCCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHh
Confidence 24679888889999999999999999999986 5778999999999999999999
Q ss_pred cchhhhHH
Q 004688 494 SGLIDVSI 501 (737)
Q Consensus 494 ~G~~qi~~ 501 (737)
+|++|++.
T Consensus 226 ~g~~~~~~ 233 (236)
T cd06435 226 YGAVQILK 233 (236)
T ss_pred cchhhhhh
Confidence 99999986
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=1.4e-28 Score=250.95 Aligned_cols=224 Identities=27% Similarity=0.313 Sum_probs=143.3
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004688 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (737)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (737)
|.|+|+||+ |||+ +.+.++|.++++++||. ++|+|+||++++.|.+.+.+..+ +
T Consensus 1 P~v~Vvip~---~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~----------~---------- 54 (228)
T PF13641_consen 1 PRVSVVIPA---YNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAA----------R---------- 54 (228)
T ss_dssp --EEEE--B---SS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHH----------T----------
T ss_pred CEEEEEEEe---cCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHH----------H----------
Confidence 789999999 9998 59999999999999955 99999999999866543321110 0
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEE
Q 004688 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVY 254 (737)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~y 254 (737)
++. -.+.+
T Consensus 55 ------------------------------------------------~~~------------------------~~v~v 62 (228)
T PF13641_consen 55 ------------------------------------------------YPR------------------------VRVRV 62 (228)
T ss_dssp ------------------------------------------------TGG-------------------------GEEE
T ss_pred ------------------------------------------------cCC------------------------CceEE
Confidence 000 02456
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcC
Q 004688 255 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEH 334 (737)
Q Consensus 255 i~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~ 334 (737)
+.++++++ .++|++|+|.+++. +++|+|+++|+|.++ +|++|++++.+|.+|+ +++||++..+.+. .
T Consensus 63 i~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~-~p~~l~~~~~~~~~~~----~~~v~~~~~~~~~-~- 129 (228)
T PF13641_consen 63 IRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVL-DPDWLERLLAAFADPG----VGAVGGPVFPDND-R- 129 (228)
T ss_dssp EE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBSS------EEEEEEEETTC-C-
T ss_pred eecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEE-CHHHHHHHHHHHHhCC----CCeEeeeEeecCC-C-
Confidence 66654321 24799999999999 889999999999997 5999999999997776 9999988866642 2
Q ss_pred ChHHHHHHHhh----hhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccC
Q 004688 335 DIYDGSLRSGY----RLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 410 (737)
Q Consensus 335 d~~~~~~~~f~----~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 410 (737)
..+..-...++ .....+....+..+++|+++++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~------------------------------------- 172 (228)
T PF13641_consen 130 NWLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE------------------------------------- 172 (228)
T ss_dssp CEEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH-------------------------------------
T ss_pred CHHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH-------------------------------------
Confidence 12111111111 1122333444556678999999999992
Q ss_pred CccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhH
Q 004688 411 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 490 (737)
Q Consensus 411 ~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 490 (737)
+.+||+.....||.++++++.++||++.|+++ +.++...|.+++++.+||.
T Consensus 173 ---------------------------~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~ 223 (228)
T PF13641_consen 173 ---------------------------EVGGFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRF 223 (228)
T ss_dssp ---------------------------HH-S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHH
T ss_pred ---------------------------HhCCCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHh
Confidence 24688888889999999999999999999986 6899999999999999999
Q ss_pred HHhcc
Q 004688 491 RWASG 495 (737)
Q Consensus 491 RWa~G 495 (737)
||+.|
T Consensus 224 RW~~g 228 (228)
T PF13641_consen 224 RWSRG 228 (228)
T ss_dssp HHH--
T ss_pred ccCcC
Confidence 99987
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=4.8e-26 Score=251.72 Aligned_cols=228 Identities=15% Similarity=0.157 Sum_probs=166.6
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004688 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (737)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~ 171 (737)
+..|+|+|+||+ |||+ +.+.+|+.|++++|||. ++|+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~---~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPL---HGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEEC---CCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 447999999999 9999 57899999999999997 8999999999997754332110
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCc
Q 004688 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPL 251 (737)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (737)
+. ||. .+
T Consensus 93 ---------------------------~~----------------------~p~------------------------~~ 99 (373)
T TIGR03472 93 ---------------------------AD----------------------FPD------------------------AD 99 (373)
T ss_pred ---------------------------Hh----------------------CCC------------------------Cc
Confidence 00 110 12
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccC
Q 004688 252 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNF 331 (737)
Q Consensus 252 l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~ 331 (737)
+.++..++++| .++|++|+|++++. ++||+++++|||.+++ |++|++++..|.||+ ++.|+++....+
T Consensus 100 i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~~----v~~V~~~~~~~~- 167 (373)
T TIGR03472 100 IDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADPD----VGLVTCLYRGRP- 167 (373)
T ss_pred eEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCCC----cceEeccccCCC-
Confidence 45564444333 45799999999998 8999999999999875 999999999998877 899988643222
Q ss_pred CcCChHHHHHHH-----hhhhHHhHhhhcC-CcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcc
Q 004688 332 NEHDIYDGSLRS-----GYRLQWPGMDGLK-GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 405 (737)
Q Consensus 332 ~~~d~~~~~~~~-----f~~~~~~g~d~~~-~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~ 405 (737)
.+.....-... |+...... +..+ ..++.|++.++||+++.
T Consensus 168 -~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~-------------------------------- 213 (373)
T TIGR03472 168 -VPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLE-------------------------------- 213 (373)
T ss_pred -CCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHH--------------------------------
Confidence 12222211111 11111111 1122 23467888999999992
Q ss_pred ccccCCccchhhHHHhhhhhccccccccccccccccccC--CCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHH
Q 004688 406 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLN 483 (737)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~--~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~ 483 (737)
+.|||+. ++++||++++.+++++||++.|++. +......|+|++
T Consensus 214 --------------------------------~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~ 259 (373)
T TIGR03472 214 --------------------------------AIGGLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFA 259 (373)
T ss_pred --------------------------------HcCChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHH
Confidence 2467874 6789999999999999999999875 567778889999
Q ss_pred HHHHHhHHHhcchh
Q 004688 484 DVLIQGTRWASGLI 497 (737)
Q Consensus 484 ~~~~Qr~RWa~G~~ 497 (737)
++++||.||++...
T Consensus 260 ~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 260 TLLAHELRWSRTIR 273 (373)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999985544
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.94 E-value=2e-26 Score=240.05 Aligned_cols=171 Identities=19% Similarity=0.105 Sum_probs=115.0
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCChHHHHHHHhh---h
Q 004688 271 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGY---R 346 (737)
Q Consensus 271 aLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~---~ 346 (737)
++|.++.. +++|+|+++|||++++ |++|++++.+| .||+ +|.|++.+...|.. ...+..-+..-| .
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p~----vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDPE----IGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCCC----EEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 46677766 8999999999999975 99999999988 5776 99999988776642 123222221111 1
Q ss_pred h-HHhHhhhcCCc-ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhh
Q 004688 347 L-QWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEV 424 (737)
Q Consensus 347 ~-~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (737)
. ...+.+..+.. ...|++++||++++........ .
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~-------------------------------------------~ 170 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKG-------------------------------------------P 170 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCccccc-------------------------------------------c
Confidence 1 11222334433 3568999999999953110000 0
Q ss_pred hcccccccccccccc-ccccCCCccchHHHHHHHHHCCCEEEE--eCCCCCeeEeccCCCHHHHHHHhHHHhcchhh
Q 004688 425 LASCSYEHQTKWGEE-VGFSYQSVSEDFFTGFILHCKGWTSTY--LDPSRPQFLGTSTTNLNDVLIQGTRWASGLID 498 (737)
Q Consensus 425 v~~c~ye~~~~wg~~-~G~~~~sltED~~t~~~l~~~Gwrs~y--~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q 498 (737)
++.+.|...+. +. .+....+++||.+++++|..+||++.| +++ +.+++.+|+|++++++||.||++|++.
T Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 171 LLDYAYLTNTV--DSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred chhhccccCcc--cchHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 00000000000 11 123446789999999999999999999 875 789999999999999999999999874
No 28
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.93 E-value=3.6e-25 Score=222.17 Aligned_cols=193 Identities=16% Similarity=0.190 Sum_probs=153.0
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004688 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (737)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (737)
|.|+|+||+ |||+. .+.++|.|+++++||. ++|+|+|||++|.|.+.+.+..+
T Consensus 1 p~vsviip~---~n~~~-~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~--------------------- 53 (196)
T cd02520 1 PGVSILKPL---CGVDP-NLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIA--------------------- 53 (196)
T ss_pred CCeEEEEec---CCCCc-cHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHH---------------------
Confidence 789999999 99984 6899999999999997 89999999999977643322110
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEE
Q 004688 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVY 254 (737)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~y 254 (737)
+|+.+ .+.+
T Consensus 54 -----------------------------------------------~~~~~------------------------~~~~ 62 (196)
T cd02520 54 -----------------------------------------------KYPNV------------------------DARL 62 (196)
T ss_pred -----------------------------------------------HCCCC------------------------cEEE
Confidence 00000 1234
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcC
Q 004688 255 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEH 334 (737)
Q Consensus 255 i~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~ 334 (737)
+...++.| ..+|++|+|.|++. ++||+++++|+|+.++ |++|.+++..+.+++ ++.|++.
T Consensus 63 ~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~--------- 122 (196)
T cd02520 63 LIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL--------- 122 (196)
T ss_pred EecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee---------
Confidence 43333222 34799999999998 8999999999999865 999999999887776 7888643
Q ss_pred ChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccc
Q 004688 335 DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 414 (737)
Q Consensus 335 d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 414 (737)
+..|+++++||+++.
T Consensus 123 ------------------------~~~g~~~~~r~~~~~----------------------------------------- 137 (196)
T cd02520 123 ------------------------CAFGKSMALRREVLD----------------------------------------- 137 (196)
T ss_pred ------------------------cccCceeeeEHHHHH-----------------------------------------
Confidence 356889999999982
Q ss_pred hhhHHHhhhhhccccccccccccccccccC--CCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHH
Q 004688 415 SNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRW 492 (737)
Q Consensus 415 ~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~--~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RW 492 (737)
+.+||+. ..+.||++.++++..+||++.|+++ +.++...|.++.++++||.||
T Consensus 138 -----------------------~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw 192 (196)
T cd02520 138 -----------------------AIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRW 192 (196)
T ss_pred -----------------------hccChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHH
Confidence 2356764 3568999999999999999999986 678899999999999999999
Q ss_pred hcc
Q 004688 493 ASG 495 (737)
Q Consensus 493 a~G 495 (737)
++.
T Consensus 193 ~~~ 195 (196)
T cd02520 193 SRT 195 (196)
T ss_pred hcc
Confidence 863
No 29
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=2.9e-23 Score=241.83 Aligned_cols=236 Identities=17% Similarity=0.188 Sum_probs=168.1
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEE---EcCCCCccchHhHHHHHHhhhhhhhhhhhcc
Q 004688 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAM-ALDYPVDKLHVYL---SDDGGSPITLRGMREAFRFAKWWIPFCRRYR 166 (737)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l-~~dYP~~kl~v~V---~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~ 166 (737)
+.+.|.|+|+||+ |||+ +++.+||.+++ ++|||. ++|+| .|||. |.+++.+..
T Consensus 67 ~~~~~~vsIlVPa---~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~---T~~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPA---WKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAE---TITEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeC---CCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCcc---HHHHHHHHh--------------
Confidence 4567999999999 9999 89999999986 899995 78999 47764 332221110
Q ss_pred cccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccc
Q 004688 167 IKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADL 246 (737)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 246 (737)
T Consensus 124 -------------------------------------------------------------------------------- 123 (703)
T PRK15489 124 -------------------------------------------------------------------------------- 123 (703)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcEEEEeccCCCCCCCCChHHHHHHHHHhc---CCCCCCCE--EEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEE
Q 004688 247 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVS---GVISNSPY--ILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAF 321 (737)
Q Consensus 247 ~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s---~~~s~ge~--Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~ 321 (737)
..+|+++-|..+.+ ...+||.|||.++... .....++| |+++|||.+ ++|+.|+. +.++.+.. .+
T Consensus 124 ~~~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~-~~P~~L~~-~~~~~~~~-----~~ 193 (703)
T PRK15489 124 RRYKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDV-LHPLELKY-FNYLLPRK-----DL 193 (703)
T ss_pred ccCCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCC-CChhHHHH-HHhhcCCc-----ce
Confidence 01233444443221 2468999999999863 11123444 999999998 56999965 46665322 35
Q ss_pred EccCceeccCCcC----ChHHHHHHHhhhhHHhHhhhcCCccc-ccccceeehhhccCCccccccchHhhHhhhcCchhH
Q 004688 322 VQFPQKFHNFNEH----DIYDGSLRSGYRLQWPGMDGLKGPFL-TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLF 396 (737)
Q Consensus 322 VQtPq~f~n~~~~----d~~~~~~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~ 396 (737)
||.|..-...+.. ..|..|....++..+.++..+++++. .|+|++|||++|. ++
T Consensus 194 iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~-----------~l---------- 252 (703)
T PRK15489 194 VQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALL-----------AL---------- 252 (703)
T ss_pred eeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHH-----------HH----------
Confidence 8987421111111 23556667778888899998888774 6899999999982 10
Q ss_pred HHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccc---cccCCCccchHHHHHHHHHCCCEEEEeCC----
Q 004688 397 IKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV---GFSYQSVSEDFFTGFILHCKGWTSTYLDP---- 469 (737)
Q Consensus 397 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~---G~~~~sltED~~t~~~l~~~Gwrs~y~~~---- 469 (737)
+ +++ ||..+|+|||+++|+||+++|||+.|+.-
T Consensus 253 ----------------------~------------------~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~ 292 (703)
T PRK15489 253 ----------------------M------------------KERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQF 292 (703)
T ss_pred ----------------------H------------------HhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEeccc
Confidence 0 133 58889999999999999999999999321
Q ss_pred -----------------CCCeeEeccCCCHHHHHHHhHHHhcchh-hhH
Q 004688 470 -----------------SRPQFLGTSTTNLNDVLIQGTRWASGLI-DVS 500 (737)
Q Consensus 470 -----------------~~~~~~g~aP~tl~~~~~Qr~RWa~G~~-qi~ 500 (737)
...+.++..|.|+.+.++||.||..|-. |-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 293 RVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred cccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1256778999999999999999999988 654
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.92 E-value=3.5e-24 Score=217.35 Aligned_cols=222 Identities=22% Similarity=0.228 Sum_probs=162.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||| |||+ +.+.+||.|++.++||.++++|+|+|||++|.|.+.+.+...
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~------------------------- 51 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAA------------------------- 51 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHh-------------------------
Confidence 68999 9998 789999999999999998999999999999977543220000
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
...+++.++.++
T Consensus 52 --------------------------------------------------------------------~~~~~v~~~~~~ 63 (229)
T cd04192 52 --------------------------------------------------------------------KPNFQLKILNNS 63 (229)
T ss_pred --------------------------------------------------------------------CCCcceEEeecc
Confidence 001234555443
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHH
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 338 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~ 338 (737)
. + ...+|+.++|.|++. +++|+|+++|+|+++. |++|++++..|.+++ .+.|+++..+... +....
T Consensus 64 ~-~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~--~~~~~ 129 (229)
T cd04192 64 R-V--SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKEQ----IGLVAGPVIYFKG--KSLLA 129 (229)
T ss_pred C-c--ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcCC----CcEEeeeeeecCC--ccHHH
Confidence 2 1 257999999999999 8999999999999865 999999999887654 6778777766521 11111
Q ss_pred H--HHHH-hhhhHHhHhhhcCCc-ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccc
Q 004688 339 G--SLRS-GYRLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 414 (737)
Q Consensus 339 ~--~~~~-f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 414 (737)
. .... .......+..+++.+ .++|++.++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------------- 168 (229)
T cd04192 130 KFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFF----------------------------------------- 168 (229)
T ss_pred HHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHH-----------------------------------------
Confidence 1 1111 111112222333433 456888899999982
Q ss_pred hhhHHHhhhhhccccccccccccccccccC--CCccchHHHHHHHHHCCC-EEEEeCCCCCeeEeccCCCHHHHHHHhHH
Q 004688 415 SNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGW-TSTYLDPSRPQFLGTSTTNLNDVLIQGTR 491 (737)
Q Consensus 415 ~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~--~sltED~~t~~~l~~~Gw-rs~y~~~~~~~~~g~aP~tl~~~~~Qr~R 491 (737)
+.+||++ ...+||.+..++++++|| ++.|++......+...|.+++++++||+|
T Consensus 169 -----------------------~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~R 225 (229)
T cd04192 169 -----------------------EVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKR 225 (229)
T ss_pred -----------------------HhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHH
Confidence 2467874 467899999999999999 99988654467789999999999999999
Q ss_pred Hhcc
Q 004688 492 WASG 495 (737)
Q Consensus 492 Wa~G 495 (737)
|++|
T Consensus 226 w~~g 229 (229)
T cd04192 226 WASK 229 (229)
T ss_pred hhcC
Confidence 9988
No 31
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.92 E-value=5.5e-24 Score=220.53 Aligned_cols=225 Identities=18% Similarity=0.189 Sum_probs=164.8
Q ss_pred CCCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhccccc
Q 004688 90 EDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKT 169 (737)
Q Consensus 90 ~~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~ 169 (737)
..+..|+++|+||+ |||+ ..+.+++.++.+++||.++++|+|+|||++|.|.+.+.+
T Consensus 24 ~~~~~~~isVvip~---~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------- 80 (251)
T cd06439 24 DPAYLPTVTIIIPA---YNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE------------------- 80 (251)
T ss_pred CCCCCCEEEEEEec---CCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH-------------------
Confidence 35667999999999 9998 789999999999999998899999999999976532221
Q ss_pred CCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhcccccc
Q 004688 170 ICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEM 249 (737)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (737)
+.+ .
T Consensus 81 -------------------------------~~~--------------------------------------------~- 84 (251)
T cd06439 81 -------------------------------YAD--------------------------------------------K- 84 (251)
T ss_pred -------------------------------Hhh--------------------------------------------C-
Confidence 000 0
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceec
Q 004688 250 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFH 329 (737)
Q Consensus 250 P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~ 329 (737)
++.++..++ +.+|++|+|.|++. +++|+|+++|+|.+++ |+++.+++..+.+++ ++.|++.....
T Consensus 85 -~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~ 149 (251)
T cd06439 85 -GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADPS----VGAVSGELVIV 149 (251)
T ss_pred -cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCCC----ccEEEeEEEec
Confidence 133444433 46899999999999 8899999999999976 999999999997665 88888776655
Q ss_pred cCCcCChHHHH-HHHhhhhHHhHhhhcCC-cccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccc
Q 004688 330 NFNEHDIYDGS-LRSGYRLQWPGMDGLKG-PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHK 407 (737)
Q Consensus 330 n~~~~d~~~~~-~~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~ 407 (737)
+.+. ...... ...+...........+. ....|++.++||+++.
T Consensus 150 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------- 194 (251)
T cd06439 150 DGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR---------------------------------- 194 (251)
T ss_pred CCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc----------------------------------
Confidence 4321 011111 11111111111111222 2234444557888761
Q ss_pred ccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHH
Q 004688 408 NVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLI 487 (737)
Q Consensus 408 ~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~ 487 (737)
||+.....||.++++++..+||++.|+++ +..+...|.+..++++
T Consensus 195 ---------------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~ 239 (251)
T cd06439 195 ---------------------------------PLPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEFR 239 (251)
T ss_pred ---------------------------------CCCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHHH
Confidence 44555668999999999999999999986 6889999999999999
Q ss_pred HhHHHhcchhh
Q 004688 488 QGTRWASGLID 498 (737)
Q Consensus 488 Qr~RWa~G~~q 498 (737)
|+.||+.|++|
T Consensus 240 ~~~r~~~g~~~ 250 (251)
T cd06439 240 RRVRIAAGNLQ 250 (251)
T ss_pred HHHHHHhcccc
Confidence 99999999987
No 32
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.92 E-value=7.2e-24 Score=217.00 Aligned_cols=229 Identities=18% Similarity=0.137 Sum_probs=161.2
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccc
Q 004688 96 AIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAY 175 (737)
Q Consensus 96 ~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~y 175 (737)
+|+|+||| |||+++.+.+|+.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~---~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPV---YDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEee---cCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 48999999 9999789999999999999 4 5799999999986543321100
Q ss_pred ccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEE
Q 004688 176 FSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYV 255 (737)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi 255 (737)
..+.+.++
T Consensus 51 ------------------------------------------------------------------------~~~~~~v~ 58 (235)
T cd06434 51 ------------------------------------------------------------------------KYGGIFVI 58 (235)
T ss_pred ------------------------------------------------------------------------cCCcEEEE
Confidence 00122333
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCC
Q 004688 256 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 335 (737)
Q Consensus 256 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d 335 (737)
+++ +++|++|+|.|++. +++|+|+++|+|.++. |++|++++..|.|++ ++.|++.+...+.+ ..
T Consensus 59 -~~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~----v~~v~~~~~~~~~~-~~ 122 (235)
T cd06434 59 -TVP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDPK----VGGVGTNQRILRPR-DS 122 (235)
T ss_pred -ecC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCCC----EeEEcCceEeecCc-cc
Confidence 222 56899999999998 8999999999999965 999999999998776 99999888777642 12
Q ss_pred hHHHHHHHhhhh----HHhHhhhcCCc-ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccC
Q 004688 336 IYDGSLRSGYRL----QWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 410 (737)
Q Consensus 336 ~~~~~~~~f~~~----~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 410 (737)
.+......++.. ........++. ...|...++||+++...... ..|.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~---------------~~~~------------- 174 (235)
T cd06434 123 KWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFL---------------EEFT------------- 174 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhH---------------HHhh-------------
Confidence 222211112211 11222223332 24577788999998421000 0000
Q ss_pred CccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhH
Q 004688 411 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 490 (737)
Q Consensus 411 ~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 490 (737)
. +.++.......||.+++.+++++||+..|++. +.++...|+++.++++||.
T Consensus 175 -----------------------~---~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~ 226 (235)
T cd06434 175 -----------------------N---ETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKFLKQQL 226 (235)
T ss_pred -----------------------h---hhhcCCCCCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHHHHHhh
Confidence 0 01221224678999999999999999999986 5778889999999999999
Q ss_pred HHhcchhh
Q 004688 491 RWASGLID 498 (737)
Q Consensus 491 RWa~G~~q 498 (737)
||++|..+
T Consensus 227 Rw~~~~~~ 234 (235)
T cd06434 227 RWSRSNWR 234 (235)
T ss_pred hhhhcccC
Confidence 99999854
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.91 E-value=5.8e-22 Score=220.09 Aligned_cols=229 Identities=20% Similarity=0.125 Sum_probs=156.7
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004688 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (737)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r 170 (737)
++..|+|+|+||+ |||+ +.+.+|+.++++++||. +++|+|+|||++|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa---~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPA---RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEec---CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 4678999999999 9998 78999999999999996 489999999999988643332110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccC
Q 004688 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMP 250 (737)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P 250 (737)
. +| ..+
T Consensus 94 -----------------------------~----------------------~~-----------------------~~~ 99 (384)
T TIGR03469 94 -----------------------------A----------------------YG-----------------------RGD 99 (384)
T ss_pred -----------------------------h----------------------cC-----------------------CCC
Confidence 0 00 001
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC-----CCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004688 251 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 325 (737)
Q Consensus 251 ~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~-----ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtP 325 (737)
++.++..+.+|. ...+|+.|+|.|++. ++ +|+++++|||+.++ |+.+++++..+.+++ ++.|...
T Consensus 100 ~i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~----~~~vs~~ 169 (384)
T TIGR03469 100 RLTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEG----LDLVSLM 169 (384)
T ss_pred cEEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CCEEEec
Confidence 344554333222 246999999999998 56 99999999999865 999999999987654 4555443
Q ss_pred ceeccCCcCChHHHHH----HHhhhhHH---hHhhhc-CCcccccccceeehhhccCCccccccchHhhHhhhcCchhHH
Q 004688 326 QKFHNFNEHDIYDGSL----RSGYRLQW---PGMDGL-KGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFI 397 (737)
Q Consensus 326 q~f~n~~~~d~~~~~~----~~f~~~~~---~g~d~~-~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~ 397 (737)
.++.. .+.+.... ..++.... ...+.. ......|.+.++||+++.
T Consensus 170 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~------------------------ 222 (384)
T TIGR03469 170 VRLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALE------------------------ 222 (384)
T ss_pred ccccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHH------------------------
Confidence 33321 12221111 11111100 011111 112246888899999982
Q ss_pred HhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccC--CCccchHHHHHHHHHCCCEEEEeCCCCCeeE
Q 004688 398 KSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFL 475 (737)
Q Consensus 398 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~--~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~ 475 (737)
+.|||+. ..+.||++++.++.++|+++.+.... ....
T Consensus 223 ----------------------------------------~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s 261 (384)
T TIGR03469 223 ----------------------------------------RIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRS 261 (384)
T ss_pred ----------------------------------------HcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEE
Confidence 2467774 57899999999999999999998753 3333
Q ss_pred eccCCCHHHHHHHhHHHh
Q 004688 476 GTSTTNLNDVLIQGTRWA 493 (737)
Q Consensus 476 g~aP~tl~~~~~Qr~RWa 493 (737)
...-+++.+.++|+.||+
T Consensus 262 ~r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 262 LRPYDGLGEIWRMIARTA 279 (384)
T ss_pred EEecCCHHHHHHHHHHhH
Confidence 345578999999999995
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=4.5e-20 Score=201.09 Aligned_cols=195 Identities=18% Similarity=0.184 Sum_probs=149.8
Q ss_pred CCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcCChHHHHHH
Q 004688 264 LHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR 342 (737)
Q Consensus 264 ~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~ 342 (737)
|-+.||||+..-.+.-| +..++++++|||+++. +|.+-+++..|+ ||+ .|.+||--.-.|. ...|...+.
T Consensus 222 n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME~~P~----aGlIQt~P~~~gg--~TL~AR~qQ 292 (736)
T COG2943 222 NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLMEANPD----AGLIQTSPKASGG--DTLYARCQQ 292 (736)
T ss_pred hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHhhCCC----CceeecchhhcCc--chHHHHHHH
Confidence 46889999999999988 8899999999999987 999999999886 555 9999985544442 345654443
Q ss_pred H---hh-hhHHhHhhhcCC--cccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchh
Q 004688 343 S---GY-RLQWPGMDGLKG--PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSN 416 (737)
Q Consensus 343 ~---f~-~~~~~g~d~~~~--~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 416 (737)
. .| ...-.|...|++ .-|-|.|+++|.++..... | . ...+
T Consensus 293 FatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hc--------------g------------L--p~Lp------ 338 (736)
T COG2943 293 FATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHC--------------G------------L--PPLP------ 338 (736)
T ss_pred HHHHHhchHHhhhhHHHhccccccccccceeechhhHHhc--------------C------------C--CCCC------
Confidence 2 23 345578888875 4588999999999985300 0 0 0000
Q ss_pred hHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcch
Q 004688 417 VLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGL 496 (737)
Q Consensus 417 ~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 496 (737)
..+.|.+..++.|+..+-.|.+.||.+--.++ ..-++++.|.|+.+++++-+||++|+
T Consensus 339 ---------------------G~~pFgG~ilSHDfvEAALmRRaGW~v~ia~d-L~GSyEE~PpnLlD~l~RDRRWC~GN 396 (736)
T COG2943 339 ---------------------GRGPFGGHILSHDFVEAALMRRAGWGVWIAYD-LDGSYEELPPNLLDELKRDRRWCHGN 396 (736)
T ss_pred ---------------------CCCCCCccccchHHHHHHHHhhcCceEEEecc-CCCchhhCCchHHHHHhhhhHhhhcc
Confidence 12457778899999999999999998765554 57899999999999999999999999
Q ss_pred hhhHHhhcCCcccCCCCCchHHHHHHHHHhHhh
Q 004688 497 IDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFP 529 (737)
Q Consensus 497 ~qi~~~~~~pl~~~~~~L~~~qrl~Y~~~~~~~ 529 (737)
+|.+. ++. .+++++..|+.++...+.+
T Consensus 397 Lqh~r-----l~~-~~GlHwvsR~h~~tGVmsY 423 (736)
T COG2943 397 LQHFR-----LFL-VKGLHWVSRAHFLTGVMSY 423 (736)
T ss_pred hhhce-----eec-cCCccHHHHHHHHHHHHHH
Confidence 99764 333 4899999999887765555
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.86 E-value=1.8e-20 Score=192.59 Aligned_cols=224 Identities=15% Similarity=0.097 Sum_probs=159.4
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccc
Q 004688 96 AIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAY 175 (737)
Q Consensus 96 ~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~y 175 (737)
.++|+||+ |||+ +.+.+++.++.+++||..+.+|+|+|||++|.|.+.+.+..
T Consensus 1 ~~sIiip~---~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPV---RNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEc---CCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 38999999 9998 68899999999999997789999999999996643221110
Q ss_pred ccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEE
Q 004688 176 FSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYV 255 (737)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi 255 (737)
+ ..|.+.++
T Consensus 54 -------------------------------------~----------------------------------~~~~v~~i 62 (249)
T cd02525 54 -------------------------------------A----------------------------------KDPRIRLI 62 (249)
T ss_pred -------------------------------------h----------------------------------cCCeEEEE
Confidence 0 01335565
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCC
Q 004688 256 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 335 (737)
Q Consensus 256 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d 335 (737)
..+ ++++++|+|.|++. +++|+++++|+|.++ +|++|.+++..+.+++ ...|+++....+ .+
T Consensus 63 ~~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~-~~~~l~~~~~~~~~~~----~~~v~~~~~~~~---~~ 124 (249)
T cd02525 63 DNP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVY-PKDYILELVEALKRTG----ADNVGGPMETIG---ES 124 (249)
T ss_pred eCC------CCCchHHHHHHHHH----hCCCEEEEECCCccC-CHHHHHHHHHHHhcCC----CCEEecceecCC---CC
Confidence 432 35789999999999 899999999999986 5999999998887665 555555443222 12
Q ss_pred hHHHHHHHh----hhhHHhHhhhcC---CcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccc
Q 004688 336 IYDGSLRSG----YRLQWPGMDGLK---GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKN 408 (737)
Q Consensus 336 ~~~~~~~~f----~~~~~~g~d~~~---~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~ 408 (737)
.+....... +........... .....|.+.++||+++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 169 (249)
T cd02525 125 KFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFE----------------------------------- 169 (249)
T ss_pred hHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHH-----------------------------------
Confidence 222111111 111000111111 22346777788888872
Q ss_pred cCCccchhhHHHhhhhhccccccccccccccccccCC-CccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHH
Q 004688 409 VNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLI 487 (737)
Q Consensus 409 ~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~-sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~ 487 (737)
+.+||+.. ...||.+.+++++++|+++.|+++ +......|.+++++.+
T Consensus 170 -----------------------------~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~ 218 (249)
T cd02525 170 -----------------------------KVGGFDESLVRNEDAELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLAR 218 (249)
T ss_pred -----------------------------HhCCCCcccCccchhHHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHH
Confidence 12455543 347999999999999999999986 5778888999999999
Q ss_pred HhHHHhcchhhhHH
Q 004688 488 QGTRWASGLIDVSI 501 (737)
Q Consensus 488 Qr~RWa~G~~qi~~ 501 (737)
|+.||+.|..|...
T Consensus 219 ~~~r~~~~~~~~~~ 232 (249)
T cd02525 219 QYFRYGKWRARTLR 232 (249)
T ss_pred HHHHHhhhhHHHHH
Confidence 99999999999987
No 36
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.81 E-value=2.3e-19 Score=178.00 Aligned_cols=161 Identities=22% Similarity=0.173 Sum_probs=113.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+ +.+.+|+.++++++||.++++|+|+|||++|.|.+.+.+ +
T Consensus 1 VvIp~---~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~--------------~------------- 49 (183)
T cd06438 1 ILIPA---HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA--------------A------------- 49 (183)
T ss_pred CEEec---cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH--------------c-------------
Confidence 68999 9999 799999999999999988899999999999976532110 0
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
+ ..++.+.
T Consensus 50 ------------------------------------~------------------------------------~~~~~~~ 57 (183)
T cd06438 50 ------------------------------------G------------------------------------ATVLERH 57 (183)
T ss_pred ------------------------------------C------------------------------------CeEEEeC
Confidence 0 0011222
Q ss_pred CCCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChH
Q 004688 259 KSPEHLHHFKGGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIY 337 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~-~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~ 337 (737)
+. ++.+|++|+|.+++.+. ..+++|+++++|||++++ |+++.+++..|.+. ...||+.....+.+. ..+
T Consensus 58 ~~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~-~~~ 127 (183)
T cd06438 58 DP---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNPDD-SWI 127 (183)
T ss_pred CC---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCCcc-CHH
Confidence 21 25789999999998731 114699999999999975 99999999988642 245777666555322 222
Q ss_pred HHH----HHHhhhhHHhHhhhcCCc-ccccccceeehhhc
Q 004688 338 DGS----LRSGYRLQWPGMDGLKGP-FLTGTGHYIRRESL 372 (737)
Q Consensus 338 ~~~----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL 372 (737)
... ...++.....++..+++. .+.|+|.++||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 128 TRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 222 222333444566666654 46899999999999
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.80 E-value=7.6e-19 Score=176.00 Aligned_cols=164 Identities=18% Similarity=0.133 Sum_probs=120.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+ +.+.+||.++++++ | +++|+|+|||++|.|.+.+. .+
T Consensus 1 ViIp~---~Ne~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~--~~------------------------- 46 (191)
T cd06436 1 VLVPC---LNEE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR--LA------------------------- 46 (191)
T ss_pred CEEec---cccH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh--he-------------------------
Confidence 68999 9999 79999999999999 5 48999999999997753221 00
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
...+++.++.++
T Consensus 47 --------------------------------------------------------------------~~~~~v~~i~~~ 58 (191)
T cd06436 47 --------------------------------------------------------------------ITDSRVHLLRRH 58 (191)
T ss_pred --------------------------------------------------------------------ecCCcEEEEecc
Confidence 001235566553
Q ss_pred CCCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccC
Q 004688 259 KSPEHLHHFKGGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNF 331 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~-------~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~ 331 (737)
... .+.+|++|+|.|++.+. .-.++|+|+++|||.+++ |++|+++..+|.||+ ++.||++..+.|.
T Consensus 59 ~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~ 131 (191)
T cd06436 59 LPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDPR----VAGTQSRVRMYNR 131 (191)
T ss_pred CCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCCc----eEEEeeeEEEecC
Confidence 211 24689999999999731 001358999999999865 999999888888877 9999999988875
Q ss_pred CcCChHHH----HHHHhhhhHHhHhhhcCCcccccccceeehhhc
Q 004688 332 NEHDIYDG----SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 372 (737)
Q Consensus 332 ~~~d~~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL 372 (737)
..+ .+.. +....+..++.++...+...++|+|++|||++|
T Consensus 132 ~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 132 HKN-LLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred CCC-HHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 332 2221 222334566777777776567899999999999
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.75 E-value=1.8e-17 Score=165.46 Aligned_cols=137 Identities=29% Similarity=0.402 Sum_probs=110.0
Q ss_pred EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhh----HHhHhhhcCC-cccc
Q 004688 287 YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRL----QWPGMDGLKG-PFLT 361 (737)
Q Consensus 287 ~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~-~~~~ 361 (737)
+|+++|||+.++ ||++++++.++.||+ +++||+|..+.|. ++.+.+-+...+.. .....+..+. ..+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~~----~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDPK----VDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCCC----ceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999976 999999999998776 9999999998743 34444444444321 1122233443 3467
Q ss_pred cccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhcccccccccccccccc
Q 004688 362 GTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG 441 (737)
Q Consensus 362 Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G 441 (737)
|+|.++|++++. +.+|
T Consensus 74 G~~~~~r~~~l~----------------------------------------------------------------~vg~ 89 (193)
T PF13632_consen 74 GSGMLFRREALR----------------------------------------------------------------EVGG 89 (193)
T ss_pred CcceeeeHHHHH----------------------------------------------------------------HhCc
Confidence 999999999992 2368
Q ss_pred cc-CCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcch
Q 004688 442 FS-YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGL 496 (737)
Q Consensus 442 ~~-~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 496 (737)
|+ +.+++||+++++++.++|||+.|+++ +.+++.+|+|+.++++||+||..|.
T Consensus 90 ~~~~~~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 90 FDDPFSIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred ccccccccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 99 89999999999999999999999986 4789999999999999999999997
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.74 E-value=3.6e-17 Score=163.36 Aligned_cols=193 Identities=16% Similarity=0.161 Sum_probs=132.5
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004688 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (737)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (737)
|.|+|+||+ |||+.+.+.+|+.|+++++||. .+|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsiii~~---~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPV---YNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEec---ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 689999999 9998668999999999999986 789999999998554322211
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEE
Q 004688 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVY 254 (737)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~y 254 (737)
|.+ ..+++.+
T Consensus 53 --------------------------~~~--------------------------------------------~~~~~~~ 62 (202)
T cd04184 53 --------------------------YAA--------------------------------------------QDPRIKV 62 (202)
T ss_pred --------------------------HHh--------------------------------------------cCCCEEE
Confidence 100 0122445
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCc
Q 004688 255 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNE 333 (737)
Q Consensus 255 i~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQtPq~f~n~~~ 333 (737)
+..++ +.+++.|+|.|++. +++|+++++|+|.++. |+++.+++..+ .+++ ++.|.+.........
T Consensus 63 ~~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~ 128 (202)
T cd04184 63 VFREE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHPD----ADLIYSDEDKIDEGG 128 (202)
T ss_pred EEccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCCC----CCEEEccHHhccCCC
Confidence 54433 56899999999999 8899999999999864 99999999988 5665 667765543322110
Q ss_pred CChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCcc
Q 004688 334 HDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 413 (737)
Q Consensus 334 ~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 413 (737)
. ... ..+..... .+......+.|.++++||+++.
T Consensus 129 ~-~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~---------------------------------------- 162 (202)
T cd04184 129 K-RSE----PFFKPDWS-PDLLLSQNYIGHLLVYRRSLVR---------------------------------------- 162 (202)
T ss_pred C-Eec----cccCCCCC-HHHhhhcCCccceEeEEHHHHH----------------------------------------
Confidence 0 000 00000000 0111122345667789999882
Q ss_pred chhhHHHhhhhhccccccccccccccccccCC-CccchHHHHHHHHHCCCEEEEeCC
Q 004688 414 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 414 ~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~-sltED~~t~~~l~~~Gwrs~y~~~ 469 (737)
+.+||+.+ ...||.+.++|++.+||+..|+++
T Consensus 163 ------------------------~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 163 ------------------------QVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred ------------------------HhCCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 23567654 357999999999999999999986
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.71 E-value=3e-16 Score=156.80 Aligned_cols=189 Identities=17% Similarity=0.168 Sum_probs=130.7
Q ss_pred EEEEecCCCCCCc-hHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004688 98 DVFICTADPEKEP-TFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (737)
Q Consensus 98 dV~Vpt~~pynEp-~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf 176 (737)
+|+||| |||+ ++.+.+|+.|+++++||. .+|+|+|||+++.+...+.+
T Consensus 1 sviip~---~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~-------------------------- 49 (201)
T cd04195 1 SVLMSV---YIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE-------------------------- 49 (201)
T ss_pred CEEEEc---cccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH--------------------------
Confidence 589999 8886 468999999999999995 58999999995432221111
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEe
Q 004688 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVS 256 (737)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~ 256 (737)
.|.+ ..| +.++.
T Consensus 50 -----------------------~~~~--------------------------------------------~~~-i~~i~ 61 (201)
T cd04195 50 -----------------------EFKR--------------------------------------------KLP-LKVVP 61 (201)
T ss_pred -----------------------HHHh--------------------------------------------cCC-eEEEE
Confidence 1100 012 45666
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcCC
Q 004688 257 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHD 335 (737)
Q Consensus 257 R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~n~~~~d 335 (737)
.++ +.|+++|+|.|++. ++||+|+++|+|.+++ |+++.+++..|. +|+ +++|.+.....+.+...
T Consensus 62 ~~~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 127 (201)
T cd04195 62 LEK-----NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKNPE----IDIVGGGVLEFDSDGND 127 (201)
T ss_pred cCc-----cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhCCC----eEEEcccEEEECCCCCe
Confidence 554 46899999999998 8999999999999875 999999999885 344 78887766554332111
Q ss_pred hHHHH----HHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCC
Q 004688 336 IYDGS----LRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 411 (737)
Q Consensus 336 ~~~~~----~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 411 (737)
..... ....+.. . ......+|.+.++||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~rr~~~~-------------------------------------- 163 (201)
T cd04195 128 IGKRRLPTSHDDILKF---A---RRRSPFNHPTVMFRKSKVL-------------------------------------- 163 (201)
T ss_pred eccccCCCCHHHHHHH---h---ccCCCCCChHHhhhHHHHH--------------------------------------
Confidence 11000 0011110 0 0122235666788998872
Q ss_pred ccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCC
Q 004688 412 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 412 ~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~ 469 (737)
+.+||+.....||.++.+++..+|+++.|+++
T Consensus 164 --------------------------~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 164 --------------------------AVGGYQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred --------------------------HcCCcCCCCCchHHHHHHHHHHcCCceecccH
Confidence 24678777889999999999999999999975
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.67 E-value=1.4e-15 Score=162.89 Aligned_cols=110 Identities=17% Similarity=0.054 Sum_probs=87.8
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004688 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (737)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (737)
+|+||+ |||+++.+.+||.|++++++|....+|+|+|||++|.|.+.+.+..
T Consensus 1 SIIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~------------------------- 52 (299)
T cd02510 1 SVIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY------------------------- 52 (299)
T ss_pred CEEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH-------------------------
Confidence 589999 9998779999999999999987667999999999997764332100
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEec
Q 004688 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSR 257 (737)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R 257 (737)
. ....|++.++..
T Consensus 53 ------------------------~-------------------------------------------~~~~~~v~vi~~ 65 (299)
T cd02510 53 ------------------------Y-------------------------------------------KKYLPKVKVLRL 65 (299)
T ss_pred ------------------------H-------------------------------------------hhcCCcEEEEEc
Confidence 0 001234667755
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004688 258 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 312 (737)
Q Consensus 258 ~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D 312 (737)
++ +.+++.|.|.|++. ++||+|+++|+|+.++ |++|.+++..+..
T Consensus 66 ~~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~ 110 (299)
T cd02510 66 KK-----REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAE 110 (299)
T ss_pred CC-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHh
Confidence 44 47899999999999 8999999999999975 9999999998864
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.66 E-value=1.8e-15 Score=149.53 Aligned_cols=186 Identities=17% Similarity=0.107 Sum_probs=128.2
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004688 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (737)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (737)
+|+||| |||+ +.+.+|+.++.+++||. ++|+|+|||++|.|.+.+.+.
T Consensus 1 sivi~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~-------------------------- 48 (202)
T cd06433 1 SIITPT---YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKY-------------------------- 48 (202)
T ss_pred CEEEec---cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHh--------------------------
Confidence 489999 9998 79999999999999987 899999999999765322110
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEec
Q 004688 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSR 257 (737)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R 257 (737)
.+ ...++..
T Consensus 49 ------------------------~~-----------------------------------------------~~~~~~~ 57 (202)
T cd06433 49 ------------------------ED-----------------------------------------------KITYWIS 57 (202)
T ss_pred ------------------------Hh-----------------------------------------------hcEEEEe
Confidence 00 0123333
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCCh
Q 004688 258 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDI 336 (737)
Q Consensus 258 ~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQtPq~f~n~~~~d~ 336 (737)
++ ..++++|+|.|++. +++|+|+++|+|.++. |+.+.+++..+ .+++ .++|.+...+.+.+....
T Consensus 58 ~~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~~----~~~v~g~~~~~~~~~~~~ 123 (202)
T cd06433 58 EP-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHPE----VDVVYGDVLLVDENGRVI 123 (202)
T ss_pred cC-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCCC----ccEEEeeeEEEcCCCCcc
Confidence 33 46899999999999 8999999999999876 89999988444 4554 666766554443222111
Q ss_pred HHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchh
Q 004688 337 YDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSN 416 (737)
Q Consensus 337 ~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 416 (737)
.... ...............+|++.++||+++.
T Consensus 124 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 155 (202)
T cd06433 124 GRRR-----PPPFLDKFLLYGMPICHQATFFRRSLFE------------------------------------------- 155 (202)
T ss_pred cCCC-----CcchhhhHHhhcCcccCcceEEEHHHHH-------------------------------------------
Confidence 0000 0001111222344567788899999882
Q ss_pred hHHHhhhhhccccccccccccccccccCC-CccchHHHHHHHHHCCCEEEEeCC
Q 004688 417 VLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 417 ~~~~~~~~v~~c~ye~~~~wg~~~G~~~~-sltED~~t~~~l~~~Gwrs~y~~~ 469 (737)
+.+||+.+ ...||.+..+++..+|++..++++
T Consensus 156 ---------------------~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 156 ---------------------KYGGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred ---------------------HhCCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 12346543 567999999999999999998875
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.65 E-value=1e-14 Score=151.53 Aligned_cols=123 Identities=14% Similarity=0.108 Sum_probs=88.6
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004688 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (737)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p 172 (737)
..|.|+|+||+ |||+ +.+..++.++.+...+...++|+|+|||++|.|.+.+.+..+
T Consensus 7 ~~~~vsVvIp~---yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~------------------- 63 (243)
T PLN02726 7 GAMKYSIIVPT---YNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQK------------------- 63 (243)
T ss_pred CCceEEEEEcc---CCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHH-------------------
Confidence 45899999999 9998 577888877765432223689999999999988653322110
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcE
Q 004688 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLL 252 (737)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (737)
.|. -+++
T Consensus 64 ---------------------------~~~----------------------------------------------~~~v 70 (243)
T PLN02726 64 ---------------------------VYG----------------------------------------------EDRI 70 (243)
T ss_pred ---------------------------hcC----------------------------------------------CCcE
Confidence 000 0123
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004688 253 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 325 (737)
Q Consensus 253 ~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtP 325 (737)
.++.+++ +.+|++|+|.|++. ++||+++++|+|... +|+.+.+++..+.+++ .+.|.+.
T Consensus 71 ~~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~l~~~~~~~~----~~~v~g~ 129 (243)
T PLN02726 71 LLRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSH-HPKYLPSFIKKQRETG----ADIVTGT 129 (243)
T ss_pred EEEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCC-CHHHHHHHHHHHHhcC----CcEEEEc
Confidence 4444433 46899999999998 899999999999985 5999999999886544 4556544
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.64 E-value=5.3e-15 Score=148.40 Aligned_cols=161 Identities=18% Similarity=0.140 Sum_probs=106.7
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004688 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (737)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (737)
+|+||| |||+ ..+.+++.|+++++|| +++|+|+|||++|.|.+.+.+.++
T Consensus 1 sIvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~------------------------ 50 (214)
T cd04196 1 AVLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID------------------------ 50 (214)
T ss_pred CEEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh------------------------
Confidence 589999 9999 7899999999999999 489999999999987653332110
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEec
Q 004688 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSR 257 (737)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R 257 (737)
.|+ +.+.++..
T Consensus 51 --------------------------------------------~~~-------------------------~~~~~~~~ 61 (214)
T cd04196 51 --------------------------------------------KDP-------------------------FIIILIRN 61 (214)
T ss_pred --------------------------------------------cCC-------------------------ceEEEEeC
Confidence 011 11234444
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCCh
Q 004688 258 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDI 336 (737)
Q Consensus 258 ~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQtPq~f~n~~~~d~ 336 (737)
++ ++++++|+|.|++. ++||+|+++|+|.+.. |+.|.+++..+ .++. .+++.+.....+.+.. .
T Consensus 62 ~~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~ 126 (214)
T cd04196 62 GK-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDDK----PLLVYSDLELVDENGN-P 126 (214)
T ss_pred CC-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCCC----ceEEecCcEEECCCCC-C
Confidence 33 57999999999998 8999999999999865 99999999884 4444 6777776554332111 1
Q ss_pred HHHHHHHhhhh--HHhHhhhcCCcccccccceeehhhc
Q 004688 337 YDGSLRSGYRL--QWPGMDGLKGPFLTGTGHYIRRESL 372 (737)
Q Consensus 337 ~~~~~~~f~~~--~~~g~d~~~~~~~~Gtg~~~RR~AL 372 (737)
........... ..............|+++++||+++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 164 (214)
T cd04196 127 IGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELL 164 (214)
T ss_pred cccccccccccCCccCHHHHHHhCccCCceeeEEHHHH
Confidence 10000000000 0011111223345788899999988
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.60 E-value=2.8e-14 Score=144.52 Aligned_cols=178 Identities=19% Similarity=0.108 Sum_probs=120.0
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004688 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (737)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf 176 (737)
|+|+||+ |||+ +.+.+++.|++++.|+ ..+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~---~n~~-~~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPT---LNEA-ENLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEc---cCcH-HHHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHHhc--------------------------
Confidence 6899999 9998 5899999999999984 479999999999865421110
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEe
Q 004688 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVS 256 (737)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~ 256 (737)
+++.++.
T Consensus 49 -------------------------------------------------------------------------~~~~~~~ 55 (221)
T cd02522 49 -------------------------------------------------------------------------AGVVVIS 55 (221)
T ss_pred -------------------------------------------------------------------------CCeEEEe
Confidence 1123443
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCCh
Q 004688 257 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDI 336 (737)
Q Consensus 257 R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~ 336 (737)
. ..+|++|+|.|++. +++|+|+++|+|..+. |+++.+++..+.++. ...+.....+.+. +.
T Consensus 56 ~-------~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~~~~~~~~~~~---~~ 116 (221)
T cd02522 56 S-------PKGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRADG----AVAGAFRLRFDDP---GP 116 (221)
T ss_pred C-------CcCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcCC----cEEEEEEeeecCC---cc
Confidence 1 24799999999998 8899999999999865 999999876665443 3323222233322 11
Q ss_pred HHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchh
Q 004688 337 YDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSN 416 (737)
Q Consensus 337 ~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 416 (737)
.... .......+.......+.+.|.++||+++.
T Consensus 117 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~------------------------------------------- 149 (221)
T cd02522 117 RLRL----LELGANLRSRLFGLPYGDQGLFIRRELFE------------------------------------------- 149 (221)
T ss_pred chhh----hhhcccceecccCCCcCCceEEEEHHHHH-------------------------------------------
Confidence 1110 00000011111122234557788888772
Q ss_pred hHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEE
Q 004688 417 VLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTY 466 (737)
Q Consensus 417 ~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y 466 (737)
+.|||++....||++.++++..+|++..+
T Consensus 150 ---------------------~~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 150 ---------------------ELGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred ---------------------HhCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 24678887799999999999999999876
No 46
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.60 E-value=4.8e-14 Score=143.04 Aligned_cols=114 Identities=18% Similarity=0.110 Sum_probs=85.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+ ..+.+++.++.++.|+ ..++|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPT---YNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEec---cchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 68999 9998 6899999999999983 3489999999999977542211
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
|.+ ..|.+.++..+
T Consensus 48 ----------------------~~~--------------------------------------------~~~~i~~~~~~ 61 (224)
T cd06442 48 ----------------------LAK--------------------------------------------EYPRVRLIVRP 61 (224)
T ss_pred ----------------------HHH--------------------------------------------hCCceEEEecC
Confidence 100 01223445454
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 325 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtP 325 (737)
+ +.+|++|+|.|++. +.||+|+++|+|..++ |+.+.+++..+.+++ .+.|.++
T Consensus 62 ~-----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~ 114 (224)
T cd06442 62 G-----KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEGG----ADLVIGS 114 (224)
T ss_pred C-----CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcCC----CCEEEEe
Confidence 4 57899999999999 8899999999999864 999999999876554 3445444
No 47
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.60 E-value=5.5e-14 Score=143.15 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=81.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+ +.+.+|+.|+++++||. .++|+|+|||++|.|.+.+.+-.
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~-------------------------- 49 (219)
T cd06913 1 IILPV---HNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWR-------------------------- 49 (219)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHH--------------------------
Confidence 68999 9998 79999999999999994 59999999999998764332110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
+ +. ..+++.++..+
T Consensus 50 ------------------------~---~~---------------------------------------~~~~~~~~~~~ 63 (219)
T cd06913 50 ------------------------K---KL---------------------------------------EDSGVIVLVGS 63 (219)
T ss_pred ------------------------H---hC---------------------------------------cccCeEEEEec
Confidence 0 00 00123444333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 312 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D 312 (737)
.+.+ .+.+.+.|+|.|++. ++||+++++|+|..++ |+.+.+.+..+.+
T Consensus 64 ~~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~ 111 (219)
T cd06913 64 HNSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQ 111 (219)
T ss_pred ccCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHh
Confidence 2111 246899999999998 8999999999999865 9999887776653
No 48
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.59 E-value=4.4e-14 Score=138.67 Aligned_cols=104 Identities=17% Similarity=0.146 Sum_probs=78.4
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+ +.+.+||.|+.+++|+. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 ivip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~~------------------------- 49 (182)
T cd06420 1 LIITT---YNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFKS------------------------- 49 (182)
T ss_pred CEEee---cCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHHh-------------------------
Confidence 67999 9998 68999999999999886 68999999999966432221100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
. . .. .+.++.++
T Consensus 50 ---------------------~-------------~---------------------------------~~-~~~~~~~~ 61 (182)
T cd06420 50 ---------------------Q-------------F---------------------------------PI-PIKHVWQE 61 (182)
T ss_pred ---------------------h-------------c---------------------------------CC-ceEEEEcC
Confidence 0 0 00 12344333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (737)
+ +..+|++++|.|++. ++||+|+++|+|.+++ |+++.+++..+
T Consensus 62 ~----~~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~ 104 (182)
T cd06420 62 D----EGFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA 104 (182)
T ss_pred C----cchhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh
Confidence 2 134799999999999 8999999999999865 99999999877
No 49
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.58 E-value=3e-14 Score=136.48 Aligned_cols=157 Identities=20% Similarity=0.219 Sum_probs=119.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+ +.+.+|+.++.+++||. .+|+|+|||+++.|.+.+.+..
T Consensus 1 vii~~---~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVN---YNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEe---cCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 58999 9996 79999999999999954 7899999999986543221100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
+++.++..+
T Consensus 49 -----------------------------------------------------------------------~~~~~~~~~ 57 (166)
T cd04186 49 -----------------------------------------------------------------------PEVRLIRNG 57 (166)
T ss_pred -----------------------------------------------------------------------CCeEEEecC
Confidence 013344443
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHH
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 338 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~ 338 (737)
+ +.++++|+|.+++. +++++++++|+|.+++ |+++.+++..+.+. ++++.+++.
T Consensus 58 ~-----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~---~~~~~~~~~------------- 111 (166)
T cd04186 58 E-----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQD---PDVGIVGPK------------- 111 (166)
T ss_pred C-----CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhC---CCceEEEcc-------------
Confidence 3 46899999999999 7999999999999865 99999988866532 237777532
Q ss_pred HHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhH
Q 004688 339 GSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVL 418 (737)
Q Consensus 339 ~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 418 (737)
++|++.++||+++.
T Consensus 112 ---------------------~~~~~~~~~~~~~~--------------------------------------------- 125 (166)
T cd04186 112 ---------------------VSGAFLLVRREVFE--------------------------------------------- 125 (166)
T ss_pred ---------------------CceeeEeeeHHHHH---------------------------------------------
Confidence 57888899999882
Q ss_pred HHhhhhhccccccccccccccccccCC--CccchHHHHHHHHHCCCEEEEeCC
Q 004688 419 QQETEVLASCSYEHQTKWGEEVGFSYQ--SVSEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 419 ~~~~~~v~~c~ye~~~~wg~~~G~~~~--sltED~~t~~~l~~~Gwrs~y~~~ 469 (737)
+.+||+.. ...||.+.++++.++||++.++++
T Consensus 126 -------------------~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 126 -------------------EVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred -------------------HcCCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 12455543 246999999999999999999986
No 50
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.58 E-value=3.4e-14 Score=154.87 Aligned_cols=109 Identities=18% Similarity=0.209 Sum_probs=87.9
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004688 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (737)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~ 173 (737)
.|.|+|+||+ ||++ +.+.+|+.|+++++|+. ++|+|+|||++|.|.+.+.+
T Consensus 5 ~p~vSVIIP~---yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~----------------------- 55 (328)
T PRK10073 5 TPKLSIIIPL---YNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKH----------------------- 55 (328)
T ss_pred CCeEEEEEec---cCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHH-----------------------
Confidence 4889999999 9998 79999999999999985 89999999999977543221
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEE
Q 004688 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLV 253 (737)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (737)
|.+ ..|++.
T Consensus 56 ---------------------------~~~--------------------------------------------~~~~i~ 64 (328)
T PRK10073 56 ---------------------------YAE--------------------------------------------NYPHVR 64 (328)
T ss_pred ---------------------------HHh--------------------------------------------hCCCEE
Confidence 100 113455
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004688 254 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 313 (737)
Q Consensus 254 yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~ 313 (737)
++.. + +.|.++|.|.|++. ++||||+++|+|..+. |+.+.+++..+.++
T Consensus 65 vi~~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~ 113 (328)
T PRK10073 65 LLHQ-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED 113 (328)
T ss_pred EEEC-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC
Confidence 6643 2 46899999999999 8999999999999975 99999999877643
No 51
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.55 E-value=5.5e-14 Score=139.76 Aligned_cols=153 Identities=21% Similarity=0.234 Sum_probs=116.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHH-H
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR-S 343 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~-~ 343 (737)
-+.|.+||..+++. . +++|+++++|+|..++ |++|++++..+.||+ +|.|.++....+. +.+....+ .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~---~~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA---RGFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC---cCHHHHHHHH
Confidence 57899999999986 3 7899999999999976 999999999999987 9999876665543 22332222 2
Q ss_pred hhhhHHhHhh-hcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhh
Q 004688 344 GYRLQWPGMD-GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQET 422 (737)
Q Consensus 344 f~~~~~~g~d-~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 422 (737)
++.....-.. .-+..++.|..+++||++|.
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~------------------------------------------------- 114 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALE------------------------------------------------- 114 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHH-------------------------------------------------
Confidence 2211111111 22456788999999999992
Q ss_pred hhhccccccccccccccccccC--CCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccC----CCHHHHHHHhHHHhc
Q 004688 423 EVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST----TNLNDVLIQGTRWAS 494 (737)
Q Consensus 423 ~~v~~c~ye~~~~wg~~~G~~~--~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP----~tl~~~~~Qr~RWa~ 494 (737)
+.|||.. +.+.||+.+|-+++++|||++..+. +......| .++.++++++.||++
T Consensus 115 ---------------~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 115 ---------------EIGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ---------------HcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 2356664 7899999999999999999999875 45666666 489999999999985
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.54 E-value=2e-13 Score=136.78 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=87.4
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||| |||+ +.+.+++.|++++.||. .+|+|+|||++|.|.+.+.+..
T Consensus 1 viI~~---~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~-------------------------- 48 (202)
T cd04185 1 AVVVT---YNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLG-------------------------- 48 (202)
T ss_pred CEEEe---eCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhc--------------------------
Confidence 68999 9998 78999999999999995 5799999999997653221100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
...| +.++..+
T Consensus 49 --------------------------------------------------------------------~~~~-i~~~~~~ 59 (202)
T cd04185 49 --------------------------------------------------------------------DLDN-IVYLRLP 59 (202)
T ss_pred --------------------------------------------------------------------CCCc-eEEEECc
Confidence 0011 3455544
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceec
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFH 329 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~ 329 (737)
+ +.+++.++|.+++.+- .+++|+++++|+|.+++ |+++++++..+.+++ ++.+ +|..+.
T Consensus 60 ~-----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~----~~~~-~~~~~~ 118 (202)
T cd04185 60 E-----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKDN----PQFL-APLVLD 118 (202)
T ss_pred c-----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCC----ceEe-cceeEc
Confidence 4 3578899999988642 25799999999999865 999999999887665 6766 344433
No 53
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.52 E-value=7.5e-14 Score=133.03 Aligned_cols=160 Identities=28% Similarity=0.339 Sum_probs=103.2
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+ +.+.+|+.+++++.|+. .+|+|+|||+++.|.+.+.+...
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~~------------------------- 49 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELAA------------------------- 49 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHhc-------------------------
Confidence 67999 9999 79999999999999964 78999999999976542221100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
+ ..+.+.++..+
T Consensus 50 ------------------------~--------------------------------------------~~~~~~~~~~~ 61 (180)
T cd06423 50 ------------------------L--------------------------------------------YIRRVLVVRDK 61 (180)
T ss_pred ------------------------c--------------------------------------------ccceEEEEEec
Confidence 0 00123445444
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH-hhcCCCCCCceEEEccCceeccCCcCChH
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC-FHLDPKTSSSLAFVQFPQKFHNFNEHDIY 337 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~-~f~D~~~~~~vg~VQtPq~f~n~~~~d~~ 337 (737)
+ +.+|+.|+|.|++. +++|+|+++|+|..+. |+++.+++. ++.+++ ++.|.......+... ..+
T Consensus 62 ~-----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~-~~~ 126 (180)
T cd06423 62 E-----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADPK----VGAVQGRVRVRNGSE-NLL 126 (180)
T ss_pred c-----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCCC----eeeEeeeEEEecCcC-cce
Confidence 3 57899999999999 7999999999999875 999999844 444554 777765544333210 111
Q ss_pred HHHHHH-h---hhhHHhHhhhcC-Ccccccccceeehhhc
Q 004688 338 DGSLRS-G---YRLQWPGMDGLK-GPFLTGTGHYIRRESL 372 (737)
Q Consensus 338 ~~~~~~-f---~~~~~~g~d~~~-~~~~~Gtg~~~RR~AL 372 (737)
...... + ......+....+ -..+.|++.++||+++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 166 (180)
T cd06423 127 TRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREAL 166 (180)
T ss_pred eccchheecceeeeeeehhheecceeecCchHHHHHHHHH
Confidence 111100 0 111111111112 2446788889999988
No 54
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.51 E-value=6.2e-13 Score=134.63 Aligned_cols=108 Identities=20% Similarity=0.129 Sum_probs=81.7
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCC--CCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dY--P~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf 176 (737)
|+||+ |||+ ..+.+++.+++++.+ +....+|+|+|||++|.|.+.+.+..
T Consensus 1 iiip~---yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~------------------------ 52 (211)
T cd04188 1 VVIPA---YNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLA------------------------ 52 (211)
T ss_pred CEEcc---cChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHH------------------------
Confidence 68999 9998 689999999998865 44458999999999997754332110
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCc-EEEE
Q 004688 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPL-LVYV 255 (737)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~-l~yi 255 (737)
+ ..|. +.++
T Consensus 53 --------------------------~--------------------------------------------~~~~~i~~i 62 (211)
T cd04188 53 --------------------------R--------------------------------------------KNPALIRVL 62 (211)
T ss_pred --------------------------H--------------------------------------------hCCCcEEEE
Confidence 0 0011 2455
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004688 256 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 314 (737)
Q Consensus 256 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 314 (737)
..++ ..||++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.++.
T Consensus 63 ~~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~ 111 (211)
T cd04188 63 TLPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTSG 111 (211)
T ss_pred Eccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC
Confidence 4443 35899999999999 8999999999999865 999999999865443
No 55
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.50 E-value=4.9e-13 Score=142.56 Aligned_cols=109 Identities=16% Similarity=0.252 Sum_probs=85.7
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004688 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (737)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p 172 (737)
..|.|+|+||| |||+ +.+.+||.|+++++||. ++|+|+|||+++ .+.+.+..
T Consensus 3 ~~p~VSVIip~---yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPT---WNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEe---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 35899999999 9999 57889999999999996 899999999984 22111100
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcE
Q 004688 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLL 252 (737)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (737)
++ ...|++
T Consensus 55 -----------------------------~~-------------------------------------------~~~~ri 62 (279)
T PRK10018 55 -----------------------------TA-------------------------------------------LNDPRI 62 (279)
T ss_pred -----------------------------HH-------------------------------------------cCCCCE
Confidence 00 011356
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004688 253 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 253 ~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (737)
.|+..++ +.|+++|+|.|++. ++||+|+++|+|.+.. |+.|.+.+.++.
T Consensus 63 ~~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 63 TYIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 7776554 57899999999999 8999999999999976 999999888765
No 56
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.50 E-value=1.4e-13 Score=141.00 Aligned_cols=139 Identities=18% Similarity=0.173 Sum_probs=85.9
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC---CCEEEEeCCCCCCCchHHHHHHH---Hhh-cCCCCCCceEEEcc
Q 004688 252 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISN---SPYILGLDCDMYCNDPTSARQAM---CFH-LDPKTSSSLAFVQF 324 (737)
Q Consensus 252 l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~---ge~Il~lDAD~~~~~p~~L~~~v---~~f-~D~~~~~~vg~VQt 324 (737)
+.++..++ +.|+++|+|.|++. +. +|+++++|+|..++ |++|.+++ ..+ .+++ ++.+ +
T Consensus 49 i~~i~~~~-----n~G~~~a~N~g~~~----a~~~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~~~~~----~~~~-~ 113 (237)
T cd02526 49 IELIHLGE-----NLGIAKALNIGIKA----ALENGADYVLLFDQDSVPP-PDMVEKLLAYKILSDKNSN----IGAV-G 113 (237)
T ss_pred EEEEECCC-----ceehHHhhhHHHHH----HHhCCCCEEEEECCCCCcC-HhHHHHHHHHHHhhccCCC----eEEE-e
Confidence 45666554 35799999999998 54 49999999999965 99999985 322 2333 6655 4
Q ss_pred CceeccCCcCChHHHHHHH-hhhhHHhHhhh-cCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhh
Q 004688 325 PQKFHNFNEHDIYDGSLRS-GYRLQWPGMDG-LKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQ 402 (737)
Q Consensus 325 Pq~f~n~~~~d~~~~~~~~-f~~~~~~g~d~-~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~ 402 (737)
|+................. .+......... .......|+|+++||+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~----------------------------- 164 (237)
T cd02526 114 PRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALE----------------------------- 164 (237)
T ss_pred eeEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHH-----------------------------
Confidence 5544322111100000000 00000000111 1223456888899999882
Q ss_pred hccccccCCccchhhHHHhhhhhccccccccccccccccccCCCc--cchHHHHHHHHHCCCEEEEeCC
Q 004688 403 SYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV--SEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sl--tED~~t~~~l~~~Gwrs~y~~~ 469 (737)
+.+||+.... .||++.++|+..+||+..|++.
T Consensus 165 -----------------------------------~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 165 -----------------------------------KVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred -----------------------------------HhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 2356765432 5899999999999999999986
No 57
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.49 E-value=1.3e-12 Score=137.03 Aligned_cols=48 Identities=19% Similarity=0.121 Sum_probs=39.9
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCC-CCCCceEEEEEcCCCCccchH
Q 004688 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLR 146 (737)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~d-YP~~kl~v~V~DDg~~~~T~~ 146 (737)
|.|+|+||| |||+ +.+.+|+.|+.++. .+...++|+|+|||++|.|.+
T Consensus 1 ~~vSVIi~~---yN~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVA---FRNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEe---CCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 679999999 9998 68999999998642 233358999999999998864
No 58
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.46 E-value=9.1e-14 Score=132.38 Aligned_cols=163 Identities=18% Similarity=0.084 Sum_probs=106.7
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004688 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (737)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (737)
+|+||| |||+ +.+.+|+.|++.+.++. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPT---YNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEE---SS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEe---eCCH-HHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc------------------------
Confidence 699999 9996 79999999999995554 78999999999876543322110
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEec
Q 004688 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSR 257 (737)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R 257 (737)
..+++.|+.+
T Consensus 51 ----------------------------------------------------------------------~~~~i~~i~~ 60 (169)
T PF00535_consen 51 ----------------------------------------------------------------------SDPNIRYIRN 60 (169)
T ss_dssp ----------------------------------------------------------------------CSTTEEEEEH
T ss_pred ----------------------------------------------------------------------cccccccccc
Confidence 1135778888
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChH
Q 004688 258 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIY 337 (737)
Q Consensus 258 ~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~ 337 (737)
+++ .++++|+|.|++. +++++++++|+|.+++ |+++.+++..+.+.. ..+.....+....+.......
T Consensus 61 ~~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 128 (169)
T PF00535_consen 61 PEN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRR 128 (169)
T ss_dssp CCC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECC
T ss_pred ccc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecCCccccccc
Confidence 763 5999999999999 8999999999999976 899999999998633 123222222222211100000
Q ss_pred HH--HHHHhhhhHHhHhhhcCCcccccccceeehhhc
Q 004688 338 DG--SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 372 (737)
Q Consensus 338 ~~--~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL 372 (737)
.. .....+..............++|+++++||+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 165 (169)
T PF00535_consen 129 LRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVF 165 (169)
T ss_dssp CTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHH
T ss_pred cchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHH
Confidence 00 001122233344444567788999999999998
No 59
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.43 E-value=2.8e-11 Score=132.34 Aligned_cols=117 Identities=20% Similarity=0.185 Sum_probs=85.8
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcC------CCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhc
Q 004688 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRY 165 (737)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~------dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~ 165 (737)
+..|.|+|+||+ |||+ ..+.+++.++.+. ++|...++|+|+||||+|.|.+.+.+.++ ++
T Consensus 67 ~~~~~isVVIP~---yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~----------~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPA---YNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWR----------QN 132 (333)
T ss_pred CCCeEEEEEEee---CCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHH----------hc
Confidence 456899999999 9999 5788998887653 24555689999999999988753322110 00
Q ss_pred ccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhcc
Q 004688 166 RIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQAD 245 (737)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 245 (737)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (333)
T PTZ00260 133 I------------------------------------------------------------------------------- 133 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004688 246 LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 312 (737)
Q Consensus 246 ~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D 312 (737)
..-+.+..+..++ +.||++|+|.|++. ++||+|+++|||... +|+.+.+++..+.+
T Consensus 134 -~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~~~~l~~l~~~l~~ 189 (333)
T PTZ00260 134 -NPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGAT-DIDDFDKLEDIMLK 189 (333)
T ss_pred -CCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCC-CHHHHHHHHHHHHH
Confidence 0001244554443 46899999999998 899999999999985 49999888887753
No 60
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.42 E-value=4.6e-11 Score=135.92 Aligned_cols=166 Identities=17% Similarity=0.216 Sum_probs=103.5
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcCChHH--HHHHHhh-hhHHhHhhhcCCc
Q 004688 283 SNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYD--GSLRSGY-RLQWPGMDGLKGP 358 (737)
Q Consensus 283 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~n~~~~d~~~--~~~~~f~-~~~~~g~d~~~~~ 358 (737)
...|||+.+|||+.+ +|+++.+++.-+. ||+ ++-|-+.-+..|... .... +..+.+. ...+++..+.-|.
T Consensus 200 ~~~~~il~~DaDt~~-~p~~~~~lv~~m~~d~~----i~gvCG~t~i~n~~~-s~~t~~Q~fEY~ish~l~Ka~Es~fG~ 273 (527)
T PF03142_consen 200 DFYEYILMVDADTKF-DPDSVNRLVDAMERDPK----IGGVCGETRIDNKGQ-SWWTMYQVFEYAISHHLQKAFESVFGS 273 (527)
T ss_pred cceEEEEEecCCceE-cHHHHHHHHHHHcCCCC----eEEEeceeEEcCCCC-CHhhheeccchhHHHHHHHHHHHHhCc
Confidence 345999999999986 5999999998774 666 766766555555422 1221 2222222 2334444444333
Q ss_pred c-c-ccccceeehhhccCC-----ccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhcccccc
Q 004688 359 F-L-TGTGHYIRRESLYGN-----FKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYE 431 (737)
Q Consensus 359 ~-~-~Gtg~~~RR~AL~~~-----~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye 431 (737)
. | .|.-+++|-+|+..+ |.... + ++-++|.. .
T Consensus 274 VtCLPGcfsmyR~~a~~~~~~~~~p~l~~-~--~i~~~Y~~--------------~------------------------ 312 (527)
T PF03142_consen 274 VTCLPGCFSMYRISALMDGDGYWVPLLIS-P--DIIEKYSE--------------N------------------------ 312 (527)
T ss_pred eeecCCcceeeeeehhccccccccccccc-h--HHHHHHhh--------------c------------------------
Confidence 3 3 377778999999641 10000 0 11111100 0
Q ss_pred cccccccccc-ccCCCccchHHHHHHHHHC--CCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcchhhhHH
Q 004688 432 HQTKWGEEVG-FSYQSVSEDFFTGFILHCK--GWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSI 501 (737)
Q Consensus 432 ~~~~wg~~~G-~~~~sltED~~t~~~l~~~--Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~ 501 (737)
.. +... ..-..+.||-.++-.|.++ |||..|++. +.+.+.+|++++.+++||+||..|.+-.++
T Consensus 313 -~~---dtlh~~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 313 -PV---DTLHQKNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred -cc---hHHHHHhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 00 0000 0112578999888777776 899999996 789999999999999999999999986544
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.41 E-value=1.8e-12 Score=127.42 Aligned_cols=162 Identities=15% Similarity=0.097 Sum_probs=105.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ |||+ +.+.+|+.++.++.|+....+|+|+|||++|.|.+.+.+.
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~--------------------------- 49 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIAREL--------------------------- 49 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHH---------------------------
Confidence 57999 9998 7899999999999996667899999999999765432211
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
.+ ..|.+.++..+
T Consensus 50 -----------------------~~--------------------------------------------~~~~~~~~~~~ 62 (185)
T cd04179 50 -----------------------AA--------------------------------------------RVPRVRVIRLS 62 (185)
T ss_pred -----------------------HH--------------------------------------------hCCCeEEEEcc
Confidence 00 01223455444
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCc-CChH
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNE-HDIY 337 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~-~d~~ 337 (737)
+ ..+|++|+|.+++. +.||+++++|+|..+. |++|.+++..+.+++ .++|+.+....+... ...+
T Consensus 63 ~-----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~~~~~~~~~~~~~~ 128 (185)
T cd04179 63 R-----NFGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEGG----ADVVIGSRFVRGGGAGMPLL 128 (185)
T ss_pred C-----CCCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC----CcEEEEEeecCCCcccchHH
Confidence 4 35799999999999 8999999999999864 999999999865443 566766655443211 1111
Q ss_pred HHHHHHhhhhHHhHhhhcCCcccccccceeehhhc
Q 004688 338 DGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 372 (737)
Q Consensus 338 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL 372 (737)
.+.....+........+.......|...++||+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 163 (185)
T cd04179 129 RRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVL 163 (185)
T ss_pred HHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHH
Confidence 11111111111111122222333455568999998
No 62
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.28 E-value=3e-11 Score=128.15 Aligned_cols=145 Identities=15% Similarity=-0.022 Sum_probs=90.3
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceec
Q 004688 250 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFH 329 (737)
Q Consensus 250 P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~ 329 (737)
|++.++..++ +.|.|+|+|.|++.+- ..++|+|+++|.|.+++ |+.+.+++..+..+ +.+++.++ |..+.
T Consensus 45 ~~i~~i~~~~-----N~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 45 QKIALIHLGD-----NQGIAGAQNQGLDASF-RRGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CCeEEEECCC-----CcchHHHHHHHHHHHH-HCCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 3466776544 4689999999998831 02789999999999865 99999999887642 12478774 55433
Q ss_pred cCCcCChHHH--HHHHhhhhH-HhHhhh-cCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcc
Q 004688 330 NFNEHDIYDG--SLRSGYRLQ-WPGMDG-LKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 405 (737)
Q Consensus 330 n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~ 405 (737)
.. ....++. ......... ....+. ....+..++|+++||+++.
T Consensus 115 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~-------------------------------- 161 (281)
T TIGR01556 115 RG-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQ-------------------------------- 161 (281)
T ss_pred CC-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHH--------------------------------
Confidence 21 1111110 000000000 000001 1223456788999999982
Q ss_pred ccccCCccchhhHHHhhhhhccccccccccccccccccCC--CccchHHHHHHHHHCCCEEEEeCC
Q 004688 406 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ--SVSEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~--sltED~~t~~~l~~~Gwrs~y~~~ 469 (737)
+.|||+++ .=.||.+.++|+.++||++.++++
T Consensus 162 --------------------------------~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 162 --------------------------------RLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred --------------------------------HhCCccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 12445443 224899999999999999999986
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.26 E-value=8.5e-11 Score=115.81 Aligned_cols=51 Identities=12% Similarity=0.085 Sum_probs=41.9
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004688 251 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 251 ~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (737)
++.++..++ +.+|++|+|.|++. +.+|+|+++|+|...+ |+.|.+++..+.
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~ 106 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKWE 106 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHHh
Confidence 355665443 46899999999999 8899999999999864 999999998753
No 64
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.20 E-value=8.1e-11 Score=127.20 Aligned_cols=123 Identities=20% Similarity=0.120 Sum_probs=88.7
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004688 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (737)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p 172 (737)
.-|+|+|+||+ |||+ +.+.+++.++.++.++....+|+|+||||+|.|.+.+.+. +.
T Consensus 29 ~~~~vSVVIPa---yNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~--------------~~----- 85 (306)
T PRK13915 29 AGRTVSVVLPA---LNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAA--------------GA----- 85 (306)
T ss_pred CCCCEEEEEec---CCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHh--------------cc-----
Confidence 46899999999 9999 6899999999987653224689999999999886433211 00
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcE
Q 004688 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLL 252 (737)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (737)
++ + +..
T Consensus 86 ----------------------------------~v----------------------~------------------~~~ 91 (306)
T PRK13915 86 ----------------------------------RV----------------------V------------------SRE 91 (306)
T ss_pred ----------------------------------hh----------------------h------------------cch
Confidence 00 0 000
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEcc
Q 004688 253 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 324 (737)
Q Consensus 253 ~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQt 324 (737)
..+.+ .+ .+.+|++|+|.|++. ++||+|+++|||....+|+++.+++..+. |++ +++|.+
T Consensus 92 ~~~~~--~~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~----~~~V~g 152 (306)
T PRK13915 92 EILPE--LP--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFDPMFVPGLLGPLLTDPG----VHLVKA 152 (306)
T ss_pred hhhhc--cc--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCCHHHHHHHHHHHHhCCC----ceEEEE
Confidence 00001 01 146899999999998 89999999999996345999999998886 666 677754
No 65
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.20 E-value=2.2e-09 Score=117.14 Aligned_cols=110 Identities=16% Similarity=0.128 Sum_probs=80.6
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHc-C-CCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004688 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMA-L-DYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (737)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~-~-dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~ 171 (737)
.+.++|+||+ |||+ +.+.+++.++.+ + +.+ ...+|+|+|||++|.|.+.+.+.++
T Consensus 5 ~~~vSVVIP~---yNE~-~~i~~~l~~l~~~~~~~~-~~~EIIvVDDgS~D~T~~il~~~~~------------------ 61 (325)
T PRK10714 5 IKKVSVVIPV---YNEQ-ESLPELIRRTTAACESLG-KEYEILLIDDGSSDNSAEMLVEAAQ------------------ 61 (325)
T ss_pred CCeEEEEEcc---cCch-hhHHHHHHHHHHHHHhCC-CCEEEEEEeCCCCCcHHHHHHHHHh------------------
Confidence 3679999999 9998 677887776643 1 122 2489999999999988765443211
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCc
Q 004688 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPL 251 (737)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (737)
.+ -++
T Consensus 62 ----------------------------~~-----------------------------------------------~~~ 66 (325)
T PRK10714 62 ----------------------------AP-----------------------------------------------DSH 66 (325)
T ss_pred ----------------------------hc-----------------------------------------------CCc
Confidence 00 012
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004688 252 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 252 l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (737)
++.+..++ +.||++|+|+|+++ ++||+++++|||...+ |+.+.+++..+.
T Consensus 67 v~~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 67 IVAILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred EEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 33333332 46999999999999 8999999999999965 999999998775
No 66
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.18 E-value=6.6e-10 Score=118.60 Aligned_cols=134 Identities=16% Similarity=0.157 Sum_probs=83.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHH---
Q 004688 266 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR--- 342 (737)
Q Consensus 266 ~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~--- 342 (737)
-++|.|.|.|++. +++|+|+++|+|++++ |+++.+++.+..+-.. ..-+++-.|..+.+.+....+.....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~-~~~~~~~~p~~yl~~~~~~~~~~~~~~~~ 147 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDK-NPNAFLVYPCLYLSEEGSEKFYSQFKNLW 147 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhc-CCCceEEEeeeeccchhhHHHhhcchhcc
Confidence 4899999999999 8999999999999975 9999999883211000 11244445666654322222211110
Q ss_pred --HhhhhHHhH-hhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHH
Q 004688 343 --SGYRLQWPG-MDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 419 (737)
Q Consensus 343 --~f~~~~~~g-~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 419 (737)
.+.+....+ .+.++....+|++.+++|+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~---------------------------------------------- 181 (281)
T PF10111_consen 148 DHEFLESFISGKNSLWEFIAFASSCFLINREDFL---------------------------------------------- 181 (281)
T ss_pred hHHHHHHHhhccccccccccccceEEEEEHHHHH----------------------------------------------
Confidence 011111111 1222223345566678888772
Q ss_pred HhhhhhccccccccccccccccccCC---CccchHHHHHHHHHCCCEEEEeCC
Q 004688 420 QETEVLASCSYEHQTKWGEEVGFSYQ---SVSEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 420 ~~~~~v~~c~ye~~~~wg~~~G~~~~---sltED~~t~~~l~~~Gwrs~y~~~ 469 (737)
+.|||++. --.||++.+.||...|.+..++++
T Consensus 182 ------------------~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 182 ------------------EIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred ------------------HhCCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 24666653 236999999999999999887765
No 67
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.15 E-value=8.2e-10 Score=102.51 Aligned_cols=113 Identities=27% Similarity=0.258 Sum_probs=81.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004688 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (737)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (737)
|+||+ +||+ ..+..|+.+++.++|+. .+++|+||++++.+.+.+.+..+
T Consensus 1 iii~~---~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPA---YNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 57999 8897 68999999999999954 78999999999855432221110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEecc
Q 004688 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSRE 258 (737)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~ 258 (737)
. .+...++.++
T Consensus 50 ------------------------~---------------------------------------------~~~~~~~~~~ 60 (156)
T cd00761 50 ------------------------K---------------------------------------------DPRVIRVINE 60 (156)
T ss_pred ------------------------c---------------------------------------------CCCeEEEEec
Confidence 0 0012333333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHh-hcCCCCCCceEEEccC
Q 004688 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKTSSSLAFVQFP 325 (737)
Q Consensus 259 k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~-f~D~~~~~~vg~VQtP 325 (737)
+ +.+|++++|.+++. .++|+++++|+|.++. |+.+...+.. ..+++ .+.|+++
T Consensus 61 ~-----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~~----~~~v~~~ 114 (156)
T cd00761 61 E-----NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADPE----ADAVGGP 114 (156)
T ss_pred C-----CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCCC----ceEEecc
Confidence 3 57999999999999 7899999999999865 8999887443 44444 6777654
No 68
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.10 E-value=1.5e-09 Score=127.81 Aligned_cols=168 Identities=18% Similarity=0.238 Sum_probs=108.5
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcC-ChHHHHHHH
Q 004688 266 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEH-DIYDGSLRS 343 (737)
Q Consensus 266 ~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQtPq~f~n~~~~-d~~~~~~~~ 343 (737)
+.|-=.+|.+.... +.+=++|+.+|+|+.+ +|+++.+++.-|. ||+ ||-+-+ +..|.... -.+.+..+.
T Consensus 424 ~~~r~~~y~~~~~L--~~~v~~il~vD~dT~~-~P~ai~~lv~~f~~dp~----VggaCG--~I~~~~~~w~v~~Q~FEY 494 (862)
T KOG2571|consen 424 NQHRWVMYTAFKAL--MPSVDYILVVDADTRL-DPDALYHLVKVFDEDPQ----VGGACG--RILNKGGSWVVAYQNFEY 494 (862)
T ss_pred HHHHHHHHHHHHHh--cCcceEEEEecCCCcc-CcHHHHHHHHHhccCcc----cceecc--ccccCCCceEEeHHHHHH
Confidence 34444566666553 3566799999999996 5999999999996 777 555544 22222111 011222222
Q ss_pred hh-hhHHhHhhhcCCcccccccc--eeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHH
Q 004688 344 GY-RLQWPGMDGLKGPFLTGTGH--YIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQ 420 (737)
Q Consensus 344 f~-~~~~~g~d~~~~~~~~Gtg~--~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 420 (737)
.. ...+..-+..-|-+.|=.|| +||-+||++.. .+..+|..
T Consensus 495 ~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~---------~~~~y~~~--------------------------- 538 (862)
T KOG2571|consen 495 AISHNLQKATESVFGCVSCLPGCFSLYRASALMDQF---------VEYFYGEK--------------------------- 538 (862)
T ss_pred HHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcch---------HHhhhchh---------------------------
Confidence 22 23344445544545554554 79999997521 11112210
Q ss_pred hhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhcc
Q 004688 421 ETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASG 495 (737)
Q Consensus 421 ~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 495 (737)
.-|..-|..+ +..||-.+..++..+||+..|+.. +.+...+|+++.+++.||+||..|
T Consensus 539 --------------~~~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 539 --------------FSGPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred --------------hcCccccccc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 0000113333 489999999999999999999986 688999999999999999999999
No 69
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.09 E-value=2.5e-09 Score=115.36 Aligned_cols=121 Identities=17% Similarity=0.242 Sum_probs=89.5
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004688 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (737)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~ 173 (737)
-|.+.++|+| ||-. +.+.+++.++.+++||.+ .++++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~---yn~~-~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVT---YNRG-EDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEe---cCCH-HHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhh----------------------
Confidence 3789999999 8887 689999999999999985 34589999999775422210
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEE
Q 004688 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLV 253 (737)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (737)
..|++.
T Consensus 54 --------------------------------------------------------------------------~~~~v~ 59 (305)
T COG1216 54 --------------------------------------------------------------------------FFPNVR 59 (305)
T ss_pred --------------------------------------------------------------------------cCCcEE
Confidence 024567
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCce
Q 004688 254 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQK 327 (737)
Q Consensus 254 yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge-~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~ 327 (737)
++.-.+ +-|=||+.|.+++.+. .+++ ++++++-|+++ +|++|.+++..+.+.. ..+.|+....
T Consensus 60 ~i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~-~~~~l~~ll~~~~~~~---~~~~~~~~i~ 123 (305)
T COG1216 60 LIENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVV-EPDLLEELLKAAEEDP---AAGVVGPLIR 123 (305)
T ss_pred EEEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeee-ChhHHHHHHHHHHhCC---CCeEeeeeEe
Confidence 776544 4678999999999832 3444 89999999875 5999999999886322 2666654443
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.85 E-value=2.4e-08 Score=95.50 Aligned_cols=47 Identities=23% Similarity=0.284 Sum_probs=43.4
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH
Q 004688 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLR 146 (737)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~ 146 (737)
.|.++|+||| |||+ ..+.++|.|++++.|+. .+|+|+|||++|.|.+
T Consensus 2 ~~~~siiip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 4889999999 9999 79999999999999998 6799999999998764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.80 E-value=4.1e-08 Score=101.29 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=38.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 313 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~ 313 (737)
..+++.+.|.|+.. +.+|+|+++|||..++ |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 46899999999998 8999999999999975 99999988887653
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.73 E-value=4.8e-08 Score=104.52 Aligned_cols=152 Identities=20% Similarity=0.225 Sum_probs=106.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEE-ccCceeccCCcCChHHHHHHH
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV-QFPQKFHNFNEHDIYDGSLRS 343 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V-QtPq~f~n~~~~d~~~~~~~~ 343 (737)
-+.|-.|+--|.+. ++.|+|++.|.|-.+- ||.+..+..-|+.++ ++|+| |+|-.+.-.. +-..-++ +
T Consensus 155 ~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~dr~G--f~atle~-~ 223 (431)
T KOG2547|consen 155 LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKDRQG--FDATLEQ-V 223 (431)
T ss_pred cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeecccc--chhhhhh-e
Confidence 45788899999998 8999999999999875 999999888887554 49998 6776554211 1111111 3
Q ss_pred hhhhHHhHhhhc-----CCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhH
Q 004688 344 GYRLQWPGMDGL-----KGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVL 418 (737)
Q Consensus 344 f~~~~~~g~d~~-----~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 418 (737)
+|...++ +--+ +-....|-.|+.|+++| |
T Consensus 224 ~fgTsh~-r~yl~~n~~~~~c~tgms~~mrK~~l---------d------------------------------------ 257 (431)
T KOG2547|consen 224 YFGTSHP-RIYLSGNVLGFNCSTGMSSMMRKEAL---------D------------------------------------ 257 (431)
T ss_pred eeccCCc-eEEEccccccccccccHHHHHHHHHH---------H------------------------------------
Confidence 4433322 2112 22223466678888888 3
Q ss_pred HHhhhhhcccccccccccccccccc--CCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHhHHHhc
Q 004688 419 QQETEVLASCSYEHQTKWGEEVGFS--YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWAS 494 (737)
Q Consensus 419 ~~~~~~v~~c~ye~~~~wg~~~G~~--~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~ 494 (737)
+.+|+. .+.+.||+..+-.+..+||++.+... ++-...+-.+...+..|-.||..
T Consensus 258 -------------------~~ggi~~f~~yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 258 -------------------ECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred -------------------HhccHHHHHHHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHHHHhhh
Confidence 134433 25789999999999999999999874 45555666788888888889984
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.22 E-value=4.1e-05 Score=75.47 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=44.4
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEcc
Q 004688 251 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 324 (737)
Q Consensus 251 ~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQt 324 (737)
++....|.+ .-+=.-|--+|+.+ ++|+|+++.|||-- .+|.++-+.+..-.+- +.++|-.
T Consensus 64 ~i~l~pR~~-----klGLgtAy~hgl~~----a~g~fiviMDaDls-HhPk~ipe~i~lq~~~----~~div~G 123 (238)
T KOG2978|consen 64 NILLKPRTK-----KLGLGTAYIHGLKH----ATGDFIVIMDADLS-HHPKFIPEFIRLQKEG----NYDIVLG 123 (238)
T ss_pred cEEEEeccC-----cccchHHHHhhhhh----ccCCeEEEEeCccC-CCchhHHHHHHHhhcc----Ccceeee
Confidence 455666765 45677789999999 99999999999986 6699988876644432 3566643
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=97.96 E-value=4.9e-05 Score=79.47 Aligned_cols=43 Identities=26% Similarity=0.139 Sum_probs=33.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC--CCchHHHHHHHHhhc
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMY--CNDPTSARQAMCFHL 311 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~--~~~p~~L~~~v~~f~ 311 (737)
+.+|.||..-++-+ +.|+++++.|||-- +++-+.|.+.+.--.
T Consensus 142 nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 142 NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 46899999999998 89999999999963 344456777665333
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.73 E-value=0.00037 Score=76.19 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=36.6
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004688 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (737)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~ 143 (737)
+-|+|.| ||-| +.+.+|+.+++++.+-.+..+|+|++||+++.
T Consensus 2 ~PVlv~a---yNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~ 44 (334)
T cd02514 2 IPVLVIA---CNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE 44 (334)
T ss_pred cCEEEEe---cCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH
Confidence 3588999 8897 79999999999987445678999999999874
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.91 E-value=0.033 Score=60.84 Aligned_cols=49 Identities=24% Similarity=0.179 Sum_probs=40.3
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 004688 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (737)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~ 142 (737)
++++|+++|+|.- +||.-..+++||.|++.-.=|+---+|+++||-++.
T Consensus 151 pe~Lpt~SVviVF---HNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVF---HNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEE---ecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 5789999999999 999999999999999876633334568888887764
No 77
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=95.81 E-value=0.21 Score=60.02 Aligned_cols=74 Identities=23% Similarity=0.258 Sum_probs=51.5
Q ss_pred CCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccC-CCHHHHHHHhHHHhcchhhhHHhhcCCcccCCCCCchHHHHHHH
Q 004688 445 QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST-TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYG 523 (737)
Q Consensus 445 ~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP-~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~Y~ 523 (737)
-.++||+..|+....||-++.+|+- ...|-.- -.+.+-..=-.+-+.|+-|..+||.--.+ ..+|.+-.-+.+.
T Consensus 408 lhLsEDIfaG~n~~lRGG~i~h~ey---~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrL--g~~ld~~R~LSfy 482 (817)
T PF02364_consen 408 LHLSEDIFAGMNATLRGGRIKHCEY---IQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRL--GTRLDFFRFLSFY 482 (817)
T ss_pred ccccHHHHHHHHHHhcCCceeehhh---hhcccccccCchhhhhhHhHhcCCccchhhhHHHHHh--hccCCHHHHHHHH
Confidence 4899999999999999999999974 2233322 23455555566889999999888763222 2567766655443
No 78
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.22 E-value=0.048 Score=48.34 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=28.6
Q ss_pred CCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH
Q 004688 107 EKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLR 146 (737)
Q Consensus 107 ynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~ 146 (737)
+||+ ..+...|..-+++.+-+ +||.|||++|.|.+
T Consensus 1 rne~-~~L~~wl~~~~~lG~d~----i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGVDH----IYIYDDGSTDGTRE 35 (97)
T ss_pred CChH-HHHHHHHHHHHHcCCCE----EEEEECCCCccHHH
Confidence 4787 58999999998887543 99999999998754
No 79
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.15 E-value=0.052 Score=59.55 Aligned_cols=49 Identities=22% Similarity=0.175 Sum_probs=43.0
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004688 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (737)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~ 143 (737)
.++|+-+|+|+- +||....+-+||.|+++..=++--.+|+++||++.|.
T Consensus 121 ~dlp~TsviITf---HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITF---HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEe---ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 479999999999 9999999999999999987333367899999999984
No 80
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.61 E-value=0.028 Score=65.35 Aligned_cols=48 Identities=29% Similarity=0.274 Sum_probs=40.9
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 004688 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (737)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~ 142 (737)
+.+|+++|+|+- +||...++.+||-|+....=|.-.-+|+++||+++.
T Consensus 139 ~~Lp~~Svii~f---~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~ 186 (578)
T KOG3736|consen 139 DKLPTTSVIIIF---HNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDR 186 (578)
T ss_pred cccCCCceEEEE---ecCCCcchhheEEeehccCChhHeEEEEEeecCcch
Confidence 459999999999 999999999999998887733336689999999875
No 81
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=93.53 E-value=0.22 Score=51.44 Aligned_cols=50 Identities=14% Similarity=0.252 Sum_probs=39.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEE
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFV 322 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~V 322 (737)
...-|.+.|.|++. ++++|++++.-|..+.+++++.+++..| .||+ +|.+
T Consensus 39 ~~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~----~G~i 89 (217)
T PF13712_consen 39 AKSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPN----IGMI 89 (217)
T ss_dssp -S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TT----EEEE
T ss_pred CcCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCC----ccEE
Confidence 35677899999999 9999999999999998899999999999 7776 7666
No 82
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=86.49 E-value=4.6 Score=44.26 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=32.2
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (737)
+.||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~y 183 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIY 183 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHH
Confidence 5789988888775432 2567999999999997 57877755444
No 83
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=86.42 E-value=8 Score=40.96 Aligned_cols=80 Identities=20% Similarity=0.166 Sum_probs=42.6
Q ss_pred cCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCce-EEEccCce
Q 004688 249 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSL-AFVQFPQK 327 (737)
Q Consensus 249 ~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~v-g~VQtPq~ 327 (737)
+|++.|+.-.. |. +-..-+-.-|+|...|-...++++|+++|+|++.. .|-..+.+..-.-.++..++ ++.--|..
T Consensus 61 ~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 45677776432 21 11122445566666533335689999999999976 44444444322111111223 44446777
Q ss_pred eccC
Q 004688 328 FHNF 331 (737)
Q Consensus 328 f~n~ 331 (737)
+-|-
T Consensus 138 ~LNk 141 (346)
T COG4092 138 HLNK 141 (346)
T ss_pred ecch
Confidence 7764
No 84
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=86.35 E-value=4.4 Score=43.27 Aligned_cols=56 Identities=14% Similarity=0.152 Sum_probs=39.0
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCCC-ccchHhHHHH
Q 004688 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVY-LSDDGGS-PITLRGMREA 151 (737)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~-V~DDg~~-~~T~~~l~ea 151 (737)
..-|+|=|+.|-.| +| ..+.+=...+.+++||++++++- ++.|.+. +.|.+.|.++
T Consensus 22 ~~~e~VLILtplrn--a~--~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AA--SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCC--ch--HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 34588988888843 23 46899999999999999999984 4444441 5565555433
No 85
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=85.35 E-value=1.6 Score=54.95 Aligned_cols=72 Identities=24% Similarity=0.298 Sum_probs=46.0
Q ss_pred CCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccC-CCHHHHHHHhHHHhcchhhhHHhhcCCcccCCCCCchHHHHH
Q 004688 445 QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST-TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMC 521 (737)
Q Consensus 445 ~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP-~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~ 521 (737)
-.++||+..||.-..||-++.+|+- ...|-.- -.+.+-..=-.+-+.|+-|..+||+-=.+ | .++.+-.-|.
T Consensus 1172 inlsEDIfAG~n~tlRgG~itH~EY---iQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrL-G-~~ldffRmLS 1244 (1679)
T KOG0916|consen 1172 INLSEDIFAGFNATLRGGNITHHEY---IQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRL-G-TQLDFFRMLS 1244 (1679)
T ss_pred cccchHhhhhhhHHhhCCCccccee---eecccccccCcchhhhhhhhhcCCCcchhhhHHHHHh-c-ccccHHHHHH
Confidence 4789999999999999999998863 1222211 12333333345679999988888752222 2 4566655553
No 86
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=84.91 E-value=6.9 Score=44.53 Aligned_cols=49 Identities=24% Similarity=0.357 Sum_probs=30.4
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCC-CCceEEEEEcCCCCccch
Q 004688 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYP-VDKLHVYLSDDGGSPITL 145 (737)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP-~~kl~v~V~DDg~~~~T~ 145 (737)
...|.+-|+|-+ +|-| .-+.+||.++++.. | +++..|+|+.||+.+.|.
T Consensus 90 ~~~~~~pVlV~A---cNRp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~~ 139 (434)
T PF03071_consen 90 NKEPVIPVLVFA---CNRP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEVA 139 (434)
T ss_dssp -------EEEEE---SS-T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHHH
T ss_pred cCCCcceEEEEe---cCCc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHHH
Confidence 346778888888 7787 68999999999988 6 468899999999987543
No 87
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=83.85 E-value=2.4 Score=46.64 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=32.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (737)
+.||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHH
Confidence 5789988888775432 2567999999999997 57877766544
No 88
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=81.55 E-value=7.8 Score=42.76 Aligned_cols=43 Identities=16% Similarity=0.184 Sum_probs=28.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (737)
++||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 5799999988875532 2567999999999996 78887755433
No 89
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=78.00 E-value=11 Score=39.02 Aligned_cols=37 Identities=14% Similarity=-0.016 Sum_probs=27.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHH
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTS 302 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~ 302 (737)
.-.||-.||.|...+-...+.+++++-|.|.++. .+.
T Consensus 47 ~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~-~~~ 83 (219)
T cd00899 47 RFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPE-NDR 83 (219)
T ss_pred cchhhhhhhHHHHHHhhcCCccEEEEeccccccc-Ccc
Confidence 5679999999776543224579999999999855 444
No 90
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=77.02 E-value=14 Score=44.47 Aligned_cols=43 Identities=16% Similarity=0.144 Sum_probs=32.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (737)
+.||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~y 188 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHF 188 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHH
Confidence 5789988888875532 3677999999999997 57777765544
No 91
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=74.45 E-value=67 Score=31.89 Aligned_cols=52 Identities=12% Similarity=-0.008 Sum_probs=33.3
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHh
Q 004688 252 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 309 (737)
Q Consensus 252 l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~ 309 (737)
+.+.-.|+| .+|=..-.=..+.-+..-+-++.+.+||-+. |.+++|-++..-
T Consensus 111 ~ifclKe~N-----~kKinSHrWfFnaf~~~l~P~vcvllDvGT~-P~~~siy~Lwka 162 (163)
T PF01644_consen 111 IIFCLKEKN-----AKKINSHRWFFNAFCRQLQPNVCVLLDVGTK-PGKDSIYHLWKA 162 (163)
T ss_pred EEEEecccc-----ccccchhhHHHHHHHhhcCCcEEEEEecCCC-cCchHHHHHHhh
Confidence 556667664 4554332222332233378999999999998 568999877553
No 92
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=55.42 E-value=28 Score=39.12 Aligned_cols=40 Identities=13% Similarity=-0.001 Sum_probs=30.6
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004688 268 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 268 KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (737)
....+-+|++. .+.|++++.|||+=.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 56778888887 45599999999974445888888877654
No 93
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=50.89 E-value=1.8e+02 Score=34.01 Aligned_cols=47 Identities=17% Similarity=0.226 Sum_probs=36.2
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 004688 252 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 306 (737)
Q Consensus 252 l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~ 306 (737)
+.+|...+. ...++.+|+.|++.. .+.+++.++|.|+..+ +++|.+.
T Consensus 316 i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 316 IKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred eEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHH
Confidence 456655411 468999999999863 4567999999999976 9999874
No 94
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=48.12 E-value=23 Score=38.73 Aligned_cols=47 Identities=26% Similarity=0.272 Sum_probs=31.7
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEE
Q 004688 271 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 322 (737)
Q Consensus 271 aLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 322 (737)
--|.|+.. +..++|+++|+|+++ .+++-+.+..+........+.++|
T Consensus 118 LRNvAr~~----a~T~~v~~~DvD~~p-s~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 118 LRNVARSG----ARTDYVFLLDVDFLP-SPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHHHh----cCcceEEEecceeee-CcchHHHHHHHhhhhccCCceEEE
Confidence 34777777 899999999999984 467655555544322234457777
No 95
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=47.30 E-value=2e+02 Score=29.65 Aligned_cols=60 Identities=5% Similarity=-0.034 Sum_probs=40.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEcc
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 324 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQt 324 (737)
..+....+.+++.......+.+.|++++||+=.-+++.+.+++..|.+.+.+.-+..+..
T Consensus 75 ~~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 75 FTGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 345667788887753111246899999999976678899999988875333334555543
No 96
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=40.72 E-value=31 Score=29.72 Aligned_cols=22 Identities=18% Similarity=-0.136 Sum_probs=15.6
Q ss_pred cchHHHHHHHHHCCCEEEEeCC
Q 004688 448 SEDFFTGFILHCKGWTSTYLDP 469 (737)
Q Consensus 448 tED~~t~~~l~~~Gwrs~y~~~ 469 (737)
-||.+.+.|+..+|.+....+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 3999999999999998776554
No 97
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=35.61 E-value=3.8e+02 Score=28.10 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=27.8
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEe--CCCCCCCchHHHHHHHHhhc
Q 004688 268 KGGALNVLLRVSGVISNSPYILGL--DCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 268 KAGaLN~al~~s~~~s~ge~Il~l--DAD~~~~~p~~L~~~v~~f~ 311 (737)
...++..+++... ...+++++.+ |.|.-+. .|+++++-.+..
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 97 HRDAMRRAINAAR-RDGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred HHHHHHHHHhhhc-cCCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 5567777774321 1345655555 9987765 999988887774
No 98
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=35.46 E-value=1.6e+02 Score=31.18 Aligned_cols=28 Identities=21% Similarity=0.173 Sum_probs=21.9
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004688 283 SNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 283 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (737)
++.+..+.+|-|+++. ++-|++.+.-|.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~~ 112 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKYD 112 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS-
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhCC
Confidence 5779999999999986 888888887663
No 99
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=34.53 E-value=1.4e+02 Score=32.77 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=26.2
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHH
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 303 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L 303 (737)
.+.+..=-|..+.. ..+.++++=+||||+- +++-|
T Consensus 159 ~n~l~~YYNy~ls~---ipk~~w~iKID~DhIy-~~~KL 193 (347)
T PF06306_consen 159 ENSLYNYYNYVLSF---IPKNEWAIKIDADHIY-DTKKL 193 (347)
T ss_pred hhhhhhhhhhhhcc---cccceEEEEeccceee-cHHHH
Confidence 45677777888766 2578999999999984 46655
No 100
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=31.60 E-value=33 Score=38.58 Aligned_cols=37 Identities=27% Similarity=0.100 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004688 267 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 308 (737)
Q Consensus 267 ~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~ 308 (737)
-|--|+|.|=.- -+++|++.|+|..+.++|.|.-++.
T Consensus 97 lKeea~~~~r~~-----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 97 LKEEALNWARSG-----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHHhh-----hcceeEEeehhheeeCCchHhHHHh
Confidence 356677776543 5699999999999999999876654
No 101
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=26.75 E-value=2.2e+02 Score=27.62 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=34.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (737)
..+-.+.+..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 45778999999998 5689999999999544589998888766
No 102
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=26.20 E-value=1.7e+02 Score=30.95 Aligned_cols=41 Identities=10% Similarity=-0.055 Sum_probs=28.0
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004688 268 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (737)
Q Consensus 268 KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (737)
..+.+-+|++... .+.++|++.|+|+=.-.++.+.+++...
T Consensus 103 r~~SV~~gl~~l~--~~~~~VlihDaarP~vs~~~i~~li~~~ 143 (252)
T PLN02728 103 RQDSVFNGLQEVD--ANSELVCIHDSARPLVTSADIEKVLKDA 143 (252)
T ss_pred hHHHHHHHHHhcc--CCCCEEEEecCcCCCCCHHHHHHHHHHH
Confidence 3566777777632 3568999999976444577787777644
No 103
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=24.32 E-value=2.6e+02 Score=28.08 Aligned_cols=42 Identities=14% Similarity=-0.018 Sum_probs=33.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004688 266 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 266 ~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (737)
.+-.+++-.|++. .+.+.+++++||+=.-.++.+++++..+.
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4566788888887 56799999999996657888988887664
No 104
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=24.24 E-value=1.2e+02 Score=35.07 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=10.4
Q ss_pred HHHHHHHHHHhhhhcc
Q 004688 721 SSVFFVTFLFFGSIIL 736 (737)
Q Consensus 721 ~~~~~~~~~~~~~~~~ 736 (737)
|.+=+++|.++-+.+|
T Consensus 206 SlvDaLLFiHYlavvL 221 (505)
T PF06638_consen 206 SLVDALLFIHYLAVVL 221 (505)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555677777766665
No 105
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=23.32 E-value=2.8e+02 Score=27.82 Aligned_cols=46 Identities=17% Similarity=0.078 Sum_probs=33.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004688 265 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 312 (737)
Q Consensus 265 ~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D 312 (737)
..+.++++-+++...+ .+.+.+++++||+-.-+++.+.+++..+.+
T Consensus 72 ~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 72 QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 3578999999998732 126889999999932247888888877754
No 106
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=22.99 E-value=2.2e+02 Score=27.68 Aligned_cols=43 Identities=14% Similarity=-0.044 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004688 266 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 266 ~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (737)
.+-++++..|++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 4567788888872 156789999999994335889988887665
No 107
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=21.15 E-value=2.6e+02 Score=31.27 Aligned_cols=35 Identities=34% Similarity=0.478 Sum_probs=24.8
Q ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 004688 270 GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 306 (737)
Q Consensus 270 GaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~ 306 (737)
.+|+..++..+ +..+|+|++-|.|.+ |+|+.|+.+
T Consensus 165 ~~l~~l~~~~~-~~~dDliivSDvDEI-P~p~~l~~L 199 (356)
T PF04724_consen 165 NALNGLLRLAG-IQDDDLIIVSDVDEI-PSPETLKFL 199 (356)
T ss_pred HHHHHHhhhcC-CCCCCEEEEcCcccc-cCHHHHHHH
Confidence 45555554444 478999999999998 568887543
No 108
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=21.05 E-value=2e+02 Score=32.35 Aligned_cols=48 Identities=19% Similarity=0.218 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCChhHHHHHHHHHHHHHHhhhhcc
Q 004688 687 VLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL 736 (737)
Q Consensus 687 ~~~~~~~~~~l~p~~~al~~r~~k~~~p~~~~~~~~~~~~~~~~~~~~~~ 736 (737)
++.+.+...+++ +++-+..|-+.++ -..-+-.|.+=+++|.++.+..|
T Consensus 198 V~~~~fayWLFY-iVri~~~r~~nYk-~iV~yatslvDaLLfiHYlaVVL 245 (531)
T KOG3814|consen 198 VFLIVFAYWLFY-IVRILDERYRNYK-GIVQYATSLVDALLFIHYLAVVL 245 (531)
T ss_pred HHHHHHHHHHHH-hhhhhcccchhhH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444433333 3455665655554 22223345677888888776554
No 109
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=20.71 E-value=2e+02 Score=28.41 Aligned_cols=42 Identities=12% Similarity=0.040 Sum_probs=33.3
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004688 266 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (737)
Q Consensus 266 ~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (737)
.+-.+++..+++. .+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 74 PGPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 3556788888887 67899999999994445899988888664
No 110
>PLN03153 hypothetical protein; Provisional
Probab=20.39 E-value=7e+02 Score=29.46 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=23.7
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004688 283 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 314 (737)
Q Consensus 283 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 314 (737)
.+.+.++++|.|+++. ++-|.+.+.-+ |++
T Consensus 209 pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dpt 238 (537)
T PLN03153 209 PDVRWFVLGDDDTIFN-ADNLVAVLSKY-DPS 238 (537)
T ss_pred CCCCEEEEecCCcccc-HHHHHHHHhhc-CCC
Confidence 6889999999999986 77777776655 443
Done!