Query 004689
Match_columns 736
No_of_seqs 679 out of 4735
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 02:41:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 4.2E-52 1.4E-56 444.0 20.8 257 411-687 44-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-52 4.5E-57 441.8 16.4 257 410-686 15-288 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 4.7E-53 1.6E-57 447.1 13.0 257 409-685 27-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 3.9E-51 1.3E-55 430.8 19.9 254 411-685 39-298 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 1.7E-50 5.8E-55 430.1 21.0 250 411-687 61-316 (336)
6 4fih_A Serine/threonine-protei 100.0 2.1E-50 7.2E-55 430.7 19.3 248 410-681 76-324 (346)
7 3fpq_A Serine/threonine-protei 100.0 1.6E-49 5.5E-54 415.5 20.7 247 411-681 29-283 (290)
8 3hmm_A TGF-beta receptor type- 100.0 1.7E-49 5.8E-54 420.4 21.1 265 411-687 6-297 (303)
9 4b9d_A Serine/threonine-protei 100.0 2.2E-50 7.6E-55 431.1 13.6 249 410-681 26-277 (350)
10 4ase_A Vascular endothelial gr 100.0 4E-50 1.4E-54 432.2 13.8 264 405-687 61-347 (353)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.5E-50 2.6E-54 420.2 15.2 247 410-681 34-285 (311)
12 4fie_A Serine/threonine-protei 100.0 3E-49 1E-53 431.9 20.1 248 410-681 153-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 4.9E-49 1.7E-53 408.3 16.3 245 409-681 14-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 4.4E-49 1.5E-53 414.2 13.1 246 410-681 26-282 (304)
15 4g31_A Eukaryotic translation 100.0 4.7E-47 1.6E-51 400.0 15.5 249 410-681 7-280 (299)
16 2qkw_B Protein kinase; three-h 100.0 2.5E-44 8.5E-49 384.5 25.0 273 411-687 42-315 (321)
17 3uim_A Brassinosteroid insensi 100.0 1.1E-44 3.6E-49 388.0 20.4 288 398-685 18-309 (326)
18 4b99_A Mitogen-activated prote 100.0 1.4E-44 4.7E-49 395.7 21.2 263 410-681 56-345 (398)
19 4f9c_A Cell division cycle 7-r 100.0 7.3E-44 2.5E-48 385.7 19.3 195 410-616 23-251 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 6.2E-44 2.1E-48 409.1 18.3 250 410-681 159-411 (573)
21 3v5w_A G-protein coupled recep 100.0 2.2E-43 7.7E-48 402.3 18.4 246 411-681 192-450 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 7.2E-42 2.5E-46 363.5 20.0 256 410-688 12-283 (310)
23 3p86_A Serine/threonine-protei 100.0 1.2E-41 4.2E-46 361.8 19.0 259 408-688 37-299 (309)
24 3fxz_A Serine/threonine-protei 100.0 1.9E-41 6.3E-46 358.4 19.6 248 410-681 22-270 (297)
25 2psq_A Fibroblast growth facto 100.0 1.1E-41 3.8E-46 371.5 18.3 261 409-689 82-366 (370)
26 3kul_A Ephrin type-A receptor 100.0 2.4E-42 8.3E-47 370.0 12.8 260 405-687 46-313 (325)
27 3zgw_A Maternal embryonic leuc 100.0 1.2E-41 4.1E-46 367.3 17.4 249 409-682 11-262 (347)
28 2nru_A Interleukin-1 receptor- 100.0 1.8E-40 6E-45 352.0 26.2 280 398-686 13-305 (307)
29 4hcu_A Tyrosine-protein kinase 100.0 1E-41 3.5E-46 354.5 15.5 254 410-687 12-266 (269)
30 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.9E-42 2E-46 356.0 13.0 255 409-687 9-264 (268)
31 2qol_A Ephrin receptor; recept 100.0 5.7E-42 2E-46 374.1 13.3 257 409-688 46-310 (373)
32 2c30_A Serine/threonine-protei 100.0 1.4E-40 4.8E-45 355.7 22.5 259 399-681 24-295 (321)
33 3gen_A Tyrosine-protein kinase 100.0 2.4E-41 8.3E-46 354.3 16.1 256 409-688 25-281 (283)
34 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-41 5.1E-46 371.5 14.9 255 410-687 116-374 (377)
35 3fe3_A MAP/microtubule affinit 100.0 3.3E-41 1.1E-45 361.4 16.6 245 410-681 17-265 (328)
36 3soc_A Activin receptor type-2 100.0 4.4E-41 1.5E-45 359.7 16.9 267 409-687 25-318 (322)
37 4euu_A Serine/threonine-protei 100.0 8.6E-40 2.9E-44 349.0 26.5 272 410-687 11-309 (319)
38 3ugc_A Tyrosine-protein kinase 100.0 1.4E-41 4.9E-46 358.4 11.6 265 408-687 10-291 (295)
39 2yab_A Death-associated protei 100.0 1.2E-40 4.1E-45 361.6 18.7 249 410-681 14-273 (361)
40 4eqm_A Protein kinase; transfe 100.0 9.7E-41 3.3E-45 352.3 16.9 258 409-686 12-274 (294)
41 1o6l_A RAC-beta serine/threoni 100.0 2.3E-40 7.9E-45 356.0 20.1 246 410-681 7-261 (337)
42 2y0a_A Death-associated protei 100.0 2.3E-40 8E-45 354.7 19.4 251 408-681 11-272 (326)
43 2ivs_A Proto-oncogene tyrosine 100.0 1E-40 3.6E-45 354.6 16.2 259 409-687 24-311 (314)
44 3q4u_A Activin receptor type-1 100.0 3.8E-40 1.3E-44 348.1 20.1 258 409-685 9-300 (301)
45 3tt0_A Basic fibroblast growth 100.0 1.4E-40 4.7E-45 364.5 17.1 262 408-689 69-354 (382)
46 3c0i_A Peripheral plasma membr 100.0 4.1E-40 1.4E-44 356.5 20.5 256 407-681 23-287 (351)
47 1qcf_A Haematopoetic cell kina 100.0 7.4E-41 2.5E-45 375.1 15.0 254 409-686 189-443 (454)
48 3niz_A Rhodanese family protei 100.0 2.5E-40 8.4E-45 352.1 18.2 260 410-681 23-301 (311)
49 2izr_A Casein kinase I isoform 100.0 4.6E-40 1.6E-44 352.9 20.3 260 410-689 11-283 (330)
50 1mp8_A Focal adhesion kinase 1 100.0 1.4E-40 4.9E-45 348.3 15.7 258 408-689 15-278 (281)
51 3vhe_A Vascular endothelial gr 100.0 6.9E-41 2.4E-45 363.2 13.5 261 408-687 22-355 (359)
52 3l9p_A Anaplastic lymphoma kin 100.0 7.3E-41 2.5E-45 364.6 13.6 262 408-689 71-347 (367)
53 1opk_A P150, C-ABL, proto-onco 100.0 1E-40 3.5E-45 377.8 14.7 254 410-686 222-477 (495)
54 3poz_A Epidermal growth factor 100.0 2.4E-40 8.2E-45 354.8 16.3 255 409-687 16-278 (327)
55 3kfa_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45 348.7 14.7 259 408-689 13-273 (288)
56 3lxl_A Tyrosine-protein kinase 100.0 7.3E-41 2.5E-45 358.6 12.2 266 409-689 24-305 (327)
57 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.4E-40 4.6E-45 360.2 14.3 246 410-681 25-281 (353)
58 1ob3_A PFPK5, cell division co 100.0 3.6E-40 1.2E-44 346.6 17.1 264 410-681 4-281 (288)
59 1tki_A Titin; serine kinase, m 100.0 3.3E-40 1.1E-44 352.8 16.9 250 410-682 7-259 (321)
60 4dc2_A Protein kinase C IOTA t 100.0 1.2E-39 4.1E-44 357.3 21.8 254 410-681 54-319 (396)
61 3tki_A Serine/threonine-protei 100.0 2.3E-40 7.8E-45 354.3 15.6 250 410-681 9-262 (323)
62 3kex_A Receptor tyrosine-prote 100.0 3.7E-40 1.3E-44 352.9 17.2 254 410-687 15-276 (325)
63 3soa_A Calcium/calmodulin-depe 100.0 6.9E-40 2.3E-44 365.1 19.9 252 408-681 11-268 (444)
64 1k9a_A Carboxyl-terminal SRC k 100.0 6.4E-40 2.2E-44 367.0 19.7 249 410-687 195-445 (450)
65 3v8s_A RHO-associated protein 100.0 2.1E-40 7.2E-45 365.2 15.5 249 411-681 72-330 (410)
66 1rjb_A FL cytokine receptor; k 100.0 4.7E-40 1.6E-44 354.6 17.9 263 408-689 45-336 (344)
67 3t9t_A Tyrosine-protein kinase 100.0 2E-40 7E-45 343.9 14.4 254 410-687 10-264 (267)
68 2bdw_A Hypothetical protein K1 100.0 6.8E-40 2.3E-44 356.2 18.8 252 407-681 28-285 (362)
69 4aw2_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 365.9 17.1 252 411-681 77-339 (437)
70 1qpc_A LCK kinase; alpha beta 100.0 4.3E-40 1.5E-44 344.0 16.6 256 409-688 14-270 (279)
71 3dtc_A Mitogen-activated prote 100.0 2.5E-40 8.7E-45 344.1 14.6 250 410-684 9-270 (271)
72 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-39 4.8E-44 343.8 20.1 247 410-681 15-293 (298)
73 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.7E-40 6E-45 371.8 13.7 254 409-686 185-439 (452)
74 1kob_A Twitchin; kinase, intra 100.0 9.6E-40 3.3E-44 357.7 19.3 251 409-681 52-305 (387)
75 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.7E-40 1.9E-44 352.8 17.1 245 410-682 11-260 (336)
76 1luf_A Muscle-specific tyrosin 100.0 1.9E-40 6.4E-45 357.4 13.3 259 409-687 48-335 (343)
77 3lxp_A Non-receptor tyrosine-p 100.0 3E-40 1E-44 352.5 14.5 262 411-689 34-312 (318)
78 1t46_A HOMO sapiens V-KIT hard 100.0 4.5E-40 1.5E-44 349.5 15.8 260 409-687 24-307 (313)
79 2x4f_A Myosin light chain kina 100.0 9.2E-40 3.1E-44 356.6 18.4 247 413-681 94-343 (373)
80 3op5_A Serine/threonine-protei 100.0 8.2E-40 2.8E-44 356.0 17.9 267 409-689 36-331 (364)
81 1csn_A Casein kinase-1; phosph 100.0 2.6E-39 8.8E-44 341.2 21.2 260 410-688 12-284 (298)
82 3o0g_A Cell division protein k 100.0 1.2E-39 4.1E-44 343.3 18.4 261 410-681 4-283 (292)
83 1fot_A TPK1 delta, CAMP-depend 100.0 7.9E-40 2.7E-44 349.2 17.2 243 410-681 8-259 (318)
84 3qup_A Tyrosine-protein kinase 100.0 5E-40 1.7E-44 351.2 15.7 261 408-688 23-299 (323)
85 2pmi_A Negative RE, cyclin-dep 100.0 1.3E-39 4.6E-44 347.4 18.9 267 409-681 6-294 (317)
86 3qd2_B Eukaryotic translation 100.0 8.3E-40 2.8E-44 350.2 17.3 250 409-681 7-326 (332)
87 3cc6_A Protein tyrosine kinase 100.0 7.9E-40 2.7E-44 342.5 16.8 258 410-691 14-277 (281)
88 3p1a_A MYT1 kinase, membrane-a 100.0 1E-39 3.5E-44 347.3 17.7 251 402-681 51-305 (311)
89 4e5w_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45 351.2 11.4 264 408-686 21-301 (302)
90 1u59_A Tyrosine-protein kinase 100.0 1.9E-39 6.7E-44 340.8 19.2 254 413-690 15-275 (287)
91 4f0f_A Serine/threonine-protei 100.0 2.3E-39 7.7E-44 340.0 19.5 250 409-684 20-286 (287)
92 3hko_A Calcium/calmodulin-depe 100.0 1.5E-39 5E-44 350.8 18.5 257 408-681 26-331 (345)
93 1xjd_A Protein kinase C, theta 100.0 3.6E-40 1.2E-44 355.6 13.6 246 410-681 19-270 (345)
94 3lb7_A RAF proto-oncogene seri 100.0 9.9E-40 3.4E-44 346.8 16.7 261 405-686 33-299 (307)
95 3kmu_A ILK, integrin-linked ki 100.0 1.5E-39 5.1E-44 337.7 17.6 248 410-685 12-268 (271)
96 2pvf_A Fibroblast growth facto 100.0 8.8E-40 3E-44 351.3 16.1 262 408-689 35-320 (334)
97 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-39 4.5E-44 348.7 17.3 251 413-681 16-271 (325)
98 2i1m_A Macrophage colony-stimu 100.0 1.3E-39 4.4E-44 349.6 17.1 263 408-689 46-328 (333)
99 3a62_A Ribosomal protein S6 ki 100.0 1.4E-39 4.9E-44 348.8 17.4 247 409-681 18-277 (327)
100 3a8x_A Protein kinase C IOTA t 100.0 2.6E-39 8.9E-44 349.2 19.5 254 410-681 11-276 (345)
101 2vd5_A DMPK protein; serine/th 100.0 1.5E-39 5.1E-44 358.6 18.0 251 411-681 64-328 (412)
102 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.4E-39 4.8E-44 351.9 17.2 243 410-681 43-294 (350)
103 4eut_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 354.0 21.6 273 410-688 11-310 (396)
104 4fr4_A YANK1, serine/threonine 100.0 2.4E-39 8.2E-44 353.7 18.8 248 410-681 17-272 (384)
105 3uc3_A Serine/threonine-protei 100.0 2.5E-39 8.6E-44 351.7 18.8 251 409-681 21-275 (361)
106 2wqm_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 342.0 20.0 263 409-689 33-299 (310)
107 4fvq_A Tyrosine-protein kinase 100.0 7.5E-40 2.6E-44 343.9 14.1 249 409-687 9-275 (289)
108 3dbq_A Dual specificity protei 100.0 8.5E-40 2.9E-44 352.9 14.6 249 410-682 11-275 (343)
109 3lzb_A Epidermal growth factor 100.0 1.6E-39 5.3E-44 348.5 16.3 256 409-688 16-279 (327)
110 2i0e_A Protein kinase C-beta I 100.0 1.8E-39 6.3E-44 351.2 17.0 246 410-681 22-277 (353)
111 1vzo_A Ribosomal protein S6 ki 100.0 1.7E-39 5.9E-44 352.2 16.8 252 410-682 56-323 (355)
112 1mqb_A Ephrin type-A receptor 100.0 1.6E-39 5.3E-44 349.4 16.3 256 410-688 46-310 (333)
113 2w4o_A Calcium/calmodulin-depe 100.0 2.4E-39 8E-44 350.3 17.8 248 410-681 55-306 (349)
114 3f3z_A Calcium/calmodulin-depe 100.0 3.3E-39 1.1E-43 336.9 18.2 250 408-681 9-262 (277)
115 2a2a_A Death-associated protei 100.0 3.4E-39 1.2E-43 344.8 18.7 251 408-681 12-273 (321)
116 3mdy_A Bone morphogenetic prot 100.0 2E-38 6.9E-43 340.4 24.8 269 403-687 32-331 (337)
117 4ejn_A RAC-alpha serine/threon 100.0 1.5E-39 5.1E-44 363.8 16.2 246 410-681 150-405 (446)
118 2eva_A TAK1 kinase - TAB1 chim 100.0 3.5E-39 1.2E-43 342.5 18.2 252 410-686 10-262 (307)
119 3g33_A Cell division protein k 100.0 1.7E-39 5.9E-44 344.7 15.8 270 404-681 5-297 (308)
120 3is5_A Calcium-dependent prote 100.0 8.4E-39 2.9E-43 335.7 20.7 253 408-681 22-279 (285)
121 1b6c_B TGF-B superfamily recep 100.0 1.7E-38 5.8E-43 341.9 23.5 269 400-687 34-336 (342)
122 2buj_A Serine/threonine-protei 100.0 1.6E-39 5.3E-44 346.3 15.1 259 409-685 30-304 (317)
123 1xbb_A Tyrosine-protein kinase 100.0 3E-39 1E-43 340.0 17.1 259 410-693 18-285 (291)
124 2xir_A Vascular endothelial gr 100.0 1.6E-39 5.4E-44 345.8 14.8 262 408-688 27-311 (316)
125 3gni_B Strad alpha; kinase fol 100.0 4.6E-39 1.6E-43 353.3 18.4 268 409-681 26-334 (389)
126 2h34_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 339.0 20.7 257 410-688 36-297 (309)
127 2h8h_A Proto-oncogene tyrosine 100.0 5.2E-40 1.8E-44 375.4 11.2 254 409-686 268-522 (535)
128 4hgt_A Casein kinase I isoform 100.0 1.4E-38 4.7E-43 335.1 21.2 262 408-688 9-281 (296)
129 3dls_A PAS domain-containing s 100.0 7.4E-39 2.5E-43 344.4 19.2 241 408-681 24-275 (335)
130 3c1x_A Hepatocyte growth facto 100.0 2.2E-39 7.4E-44 353.5 15.2 254 411-687 92-355 (373)
131 3ll6_A Cyclin G-associated kin 100.0 1.5E-39 5.3E-44 348.8 13.7 254 409-687 29-308 (337)
132 2zmd_A Dual specificity protei 100.0 2.1E-39 7.2E-44 355.9 14.9 249 410-682 58-322 (390)
133 2qr7_A Ribosomal protein S6 ki 100.0 5.3E-39 1.8E-43 346.4 17.7 252 408-682 22-279 (342)
134 3pls_A Macrophage-stimulating 100.0 4.8E-39 1.7E-43 339.1 16.9 255 412-688 25-288 (298)
135 3f66_A Hepatocyte growth facto 100.0 5.4E-39 1.8E-43 339.1 17.3 255 410-687 27-291 (298)
136 2ozo_A Tyrosine-protein kinase 100.0 5.4E-39 1.9E-43 372.3 18.9 250 415-688 343-599 (613)
137 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-39 7.7E-44 340.8 14.2 262 404-686 20-287 (289)
138 4agu_A Cyclin-dependent kinase 100.0 4.6E-39 1.6E-43 341.7 16.7 264 410-681 5-285 (311)
139 1fvr_A Tyrosine-protein kinase 100.0 4.2E-39 1.4E-43 344.9 16.4 256 410-687 27-300 (327)
140 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.9E-39 2.4E-43 363.7 19.1 252 412-681 189-449 (543)
141 2r5t_A Serine/threonine-protei 100.0 2.8E-39 9.7E-44 352.2 15.1 242 410-677 40-286 (373)
142 1nxk_A MAP kinase-activated pr 100.0 2.6E-38 8.8E-43 348.4 22.8 248 413-682 67-323 (400)
143 3ork_A Serine/threonine protei 100.0 1E-39 3.4E-44 347.3 11.2 256 409-685 13-279 (311)
144 3kk8_A Calcium/calmodulin depe 100.0 1.1E-38 3.7E-43 334.2 18.8 250 410-682 8-263 (284)
145 2a19_B Interferon-induced, dou 100.0 1.2E-38 4.2E-43 333.4 19.2 251 404-687 7-274 (284)
146 3uzp_A CKI-delta, CKID, casein 100.0 2.6E-38 8.9E-43 333.2 21.7 260 410-688 11-281 (296)
147 2jam_A Calcium/calmodulin-depe 100.0 9.5E-39 3.3E-43 338.4 18.4 250 408-681 9-262 (304)
148 2ac3_A MAP kinase-interacting 100.0 2.8E-38 9.7E-43 336.4 22.1 256 413-681 18-296 (316)
149 2acx_A G protein-coupled recep 100.0 7.3E-39 2.5E-43 364.5 18.5 251 410-681 186-445 (576)
150 4fl3_A Tyrosine-protein kinase 100.0 3.7E-39 1.3E-43 374.8 16.4 249 414-687 375-631 (635)
151 3fdn_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 335.8 15.9 245 410-682 11-259 (279)
152 3g2f_A Bone morphogenetic prot 100.0 1.2E-38 4.2E-43 342.3 18.9 268 410-688 15-319 (336)
153 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.8E-38 9.7E-43 343.9 21.9 252 409-688 66-340 (365)
154 2y94_A 5'-AMP-activated protei 100.0 5.3E-39 1.8E-43 360.4 16.4 245 410-681 18-267 (476)
155 2eue_A Carbon catabolite derep 100.0 5E-39 1.7E-43 335.4 15.0 244 410-681 15-263 (275)
156 2v62_A Serine/threonine-protei 100.0 8.2E-39 2.8E-43 345.4 17.2 263 408-685 37-326 (345)
157 3bhy_A Death-associated protei 100.0 1E-38 3.4E-43 334.3 17.2 251 408-681 5-266 (283)
158 2jii_A Serine/threonine-protei 100.0 1.6E-38 5.3E-43 344.2 19.2 262 409-688 43-337 (352)
159 3brb_A Proto-oncogene tyrosine 100.0 6.2E-39 2.1E-43 341.2 15.6 261 408-688 34-309 (313)
160 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-38 5.6E-43 340.2 18.9 264 409-687 42-322 (326)
161 1u5q_A Serine/threonine protei 100.0 8.9E-39 3E-43 345.5 17.0 246 409-682 55-307 (348)
162 1byg_A CSK, protein (C-termina 100.0 6.4E-39 2.2E-43 335.1 15.2 250 409-687 22-273 (278)
163 3cok_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 333.1 17.1 247 410-681 13-263 (278)
164 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.1E-39 1.7E-43 344.7 14.7 263 409-681 35-319 (329)
165 3gxj_A TGF-beta receptor type- 100.0 2E-40 7E-45 350.3 3.6 257 410-686 5-296 (303)
166 3lm5_A Serine/threonine-protei 100.0 1.5E-38 5.3E-43 340.7 17.9 261 400-681 20-288 (327)
167 1x8b_A WEE1HU, WEE1-like prote 100.0 1E-38 3.4E-43 334.3 16.0 246 408-681 11-280 (289)
168 3ttj_A Mitogen-activated prote 100.0 1E-38 3.6E-43 358.0 17.1 261 409-681 63-356 (464)
169 3oz6_A Mitogen-activated prote 100.0 3.2E-39 1.1E-43 354.4 12.5 260 409-681 10-329 (388)
170 1p4o_A Insulin-like growth fac 100.0 3.3E-39 1.1E-43 344.6 12.2 260 408-687 25-299 (322)
171 3mtl_A Cell division protein k 100.0 4.3E-39 1.5E-43 344.5 13.1 260 410-681 4-282 (324)
172 2w5a_A Serine/threonine-protei 100.0 2.9E-39 9.9E-44 337.6 11.5 253 410-683 8-270 (279)
173 2yex_A Serine/threonine-protei 100.0 1.7E-38 5.6E-43 331.2 17.1 252 408-681 7-262 (276)
174 3eb0_A Putative uncharacterize 100.0 5.5E-39 1.9E-43 351.9 14.0 263 409-681 8-322 (383)
175 3llt_A Serine/threonine kinase 100.0 2.4E-38 8.2E-43 343.6 18.8 263 407-681 34-356 (360)
176 4aaa_A Cyclin-dependent kinase 100.0 6.2E-39 2.1E-43 344.3 13.5 264 410-681 27-307 (331)
177 3i6u_A CDS1, serine/threonine- 100.0 3.4E-38 1.2E-42 349.7 19.6 251 408-681 135-400 (419)
178 1t4h_A Serine/threonine-protei 100.0 6.3E-38 2.2E-42 329.6 20.3 246 410-681 28-283 (290)
179 2rku_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 334.5 15.7 247 410-682 17-267 (294)
180 1j1b_A Glycogen synthase kinas 100.0 1.2E-38 4E-43 353.5 14.9 259 410-681 56-337 (420)
181 1ua2_A CAK, cell division prot 100.0 2E-38 6.8E-43 342.6 16.2 266 408-682 10-293 (346)
182 2owb_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 339.2 17.8 247 409-681 42-292 (335)
183 2yfx_A Tyrosine-protein kinase 100.0 1.2E-38 4.2E-43 341.2 14.3 262 407-688 29-305 (327)
184 3lij_A Calcium/calmodulin depe 100.0 5E-38 1.7E-42 356.0 20.0 251 407-681 36-292 (494)
185 2vgo_A Serine/threonine-protei 100.0 4.2E-38 1.4E-42 329.9 18.0 244 410-681 16-263 (284)
186 3mwu_A Calmodulin-domain prote 100.0 5.2E-38 1.8E-42 355.1 19.9 251 407-681 21-277 (486)
187 3byv_A Rhoptry kinase; malaria 100.0 3.3E-39 1.1E-43 352.9 9.5 241 410-681 75-360 (377)
188 2clq_A Mitogen-activated prote 100.0 7.2E-38 2.5E-42 329.6 19.4 248 414-681 28-279 (295)
189 3a7i_A MST3 kinase, serine/thr 100.0 2.8E-38 9.5E-43 334.5 16.2 247 410-682 24-272 (303)
190 4e7w_A Glycogen synthase kinas 100.0 2.4E-38 8.1E-43 348.1 15.7 263 409-681 41-322 (394)
191 3nyv_A Calmodulin-domain prote 100.0 3.3E-38 1.1E-42 356.7 17.0 251 407-681 25-282 (484)
192 2vwi_A Serine/threonine-protei 100.0 2.1E-38 7.3E-43 334.8 14.3 261 410-681 17-288 (303)
193 2y7j_A Phosphorylase B kinase 100.0 1.9E-37 6.6E-42 337.3 22.0 250 409-681 95-360 (365)
194 3n9x_A Phosphotransferase; mal 100.0 1.2E-37 3.9E-42 346.9 20.6 197 409-613 27-253 (432)
195 3nsz_A CK II alpha, casein kin 100.0 9.4E-38 3.2E-42 334.5 19.1 256 409-681 37-320 (330)
196 1u46_A ACK-1, activated CDC42 100.0 1.8E-38 6.1E-43 333.6 13.0 256 409-687 19-284 (291)
197 3mi9_A Cell division protein k 100.0 6.9E-38 2.4E-42 338.9 18.0 265 409-681 18-312 (351)
198 3eqc_A Dual specificity mitoge 100.0 2.1E-38 7E-43 344.2 13.8 265 409-682 34-326 (360)
199 3rp9_A Mitogen-activated prote 100.0 6.8E-38 2.3E-42 351.6 18.4 192 409-608 54-280 (458)
200 3sv0_A Casein kinase I-like; t 100.0 3.3E-37 1.1E-41 346.4 23.8 260 410-688 9-279 (483)
201 2h6d_A 5'-AMP-activated protei 100.0 5.9E-38 2E-42 327.1 16.4 245 410-681 13-262 (276)
202 1cm8_A Phosphorylated MAP kina 100.0 7.1E-38 2.4E-42 341.0 17.5 258 410-681 27-308 (367)
203 1wak_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 345.3 16.1 274 398-681 27-392 (397)
204 3com_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 331.0 19.0 251 407-681 28-279 (314)
205 3pfq_A PKC-B, PKC-beta, protei 100.0 5.1E-38 1.7E-42 367.6 16.8 246 410-681 343-598 (674)
206 2r3i_A Cell division protein k 100.0 9E-38 3.1E-42 329.7 17.0 261 411-681 6-284 (299)
207 2j7t_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 331.4 15.4 251 409-681 20-276 (302)
208 3q60_A ROP5B; pseudokinase, tr 100.0 3.8E-38 1.3E-42 343.7 14.1 252 410-681 64-353 (371)
209 3fme_A Dual specificity mitoge 100.0 1.8E-38 6.3E-43 333.3 11.2 252 410-681 9-267 (290)
210 3q5i_A Protein kinase; CDPK, m 100.0 1E-37 3.4E-42 354.4 17.9 249 409-681 37-302 (504)
211 3pg1_A Mitogen-activated prote 100.0 3.1E-38 1E-42 343.0 13.0 259 410-681 24-317 (362)
212 2ycf_A Serine/threonine-protei 100.0 2.1E-37 7.3E-42 330.9 19.3 252 407-681 9-275 (322)
213 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-37 5.4E-42 331.0 18.0 254 410-688 35-303 (319)
214 2j0j_A Focal adhesion kinase 1 100.0 9E-38 3.1E-42 364.5 17.5 258 408-689 390-653 (656)
215 2xrw_A Mitogen-activated prote 100.0 1.9E-37 6.5E-42 338.2 18.7 261 410-682 27-320 (371)
216 3qyz_A Mitogen-activated prote 100.0 2.8E-37 9.4E-42 336.0 19.8 260 409-681 28-314 (364)
217 3kvw_A DYRK2, dual specificity 100.0 1.4E-37 4.7E-42 345.8 17.7 197 409-616 98-303 (429)
218 1phk_A Phosphorylase kinase; g 100.0 1.9E-37 6.6E-42 327.0 17.9 249 410-681 19-284 (298)
219 3e3p_A Protein kinase, putativ 100.0 2.1E-37 7.2E-42 335.9 17.7 266 409-681 24-315 (360)
220 3an0_A Dual specificity mitoge 100.0 3.4E-38 1.2E-42 339.6 11.4 253 410-682 53-312 (340)
221 3rgf_A Cyclin-dependent kinase 100.0 1.8E-37 6.3E-42 342.4 17.4 263 413-681 26-334 (405)
222 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-37 9.3E-42 330.3 18.0 249 410-681 26-287 (326)
223 2wtk_C Serine/threonine-protei 100.0 5.4E-37 1.9E-41 324.7 19.5 248 410-681 7-264 (305)
224 1blx_A Cyclin-dependent kinase 100.0 1.8E-37 6.2E-42 331.5 16.0 265 409-681 12-297 (326)
225 2pml_X PFPK7, Ser/Thr protein 100.0 2.2E-37 7.4E-42 334.2 16.7 259 409-681 32-323 (348)
226 2fst_X Mitogen-activated prote 100.0 1.9E-37 6.5E-42 337.5 14.9 255 409-681 30-312 (367)
227 3cek_A Dual specificity protei 100.0 2E-37 6.8E-42 329.7 14.1 250 409-682 29-294 (313)
228 1zy4_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 323.3 17.5 250 409-681 7-284 (303)
229 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-37 3.6E-42 337.4 11.8 259 410-681 13-306 (353)
230 4exu_A Mitogen-activated prote 100.0 7.6E-37 2.6E-41 333.4 18.6 259 409-681 43-324 (371)
231 2i6l_A Mitogen-activated prote 100.0 5.3E-37 1.8E-41 326.6 16.3 262 410-681 13-306 (320)
232 2wei_A Calmodulin-domain prote 100.0 1E-36 3.6E-41 320.0 18.2 253 405-681 19-277 (287)
233 1z57_A Dual specificity protei 100.0 1.4E-36 4.7E-41 325.9 19.5 263 408-681 14-329 (339)
234 2vx3_A Dual specificity tyrosi 100.0 3.6E-36 1.2E-40 329.4 21.4 199 409-616 55-262 (382)
235 2iwi_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 325.9 14.5 244 404-681 27-284 (312)
236 2rio_A Serine/threonine-protei 100.0 1.3E-36 4.3E-41 338.7 17.8 250 412-681 19-296 (434)
237 3a99_A Proto-oncogene serine/t 100.0 5.6E-37 1.9E-41 327.5 14.1 240 408-681 43-294 (320)
238 3coi_A Mitogen-activated prote 100.0 2.9E-36 9.9E-41 326.4 18.9 255 410-681 26-306 (353)
239 3aln_A Dual specificity mitoge 100.0 1.1E-36 3.9E-41 325.9 15.0 254 411-681 25-286 (327)
240 3fhr_A MAP kinase-activated pr 100.0 2.1E-36 7.3E-41 325.3 17.0 248 413-682 34-289 (336)
241 1q8y_A SR protein kinase; tran 100.0 2.2E-36 7.5E-41 329.4 17.0 263 408-681 19-334 (373)
242 2eu9_A Dual specificity protei 100.0 3.6E-36 1.2E-40 324.9 18.1 264 407-681 18-334 (355)
243 3p23_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 334.8 15.9 247 410-681 26-284 (432)
244 2dyl_A Dual specificity mitoge 100.0 1.7E-35 5.9E-40 314.9 18.2 249 410-681 27-284 (318)
245 3qa8_A MGC80376 protein; kinas 100.0 7.4E-36 2.5E-40 343.1 13.7 267 408-686 14-308 (676)
246 2pzi_A Probable serine/threoni 100.0 4.1E-35 1.4E-39 344.8 20.0 240 408-687 80-328 (681)
247 3uqc_A Probable conserved tran 100.0 3.3E-35 1.1E-39 308.7 17.0 233 407-688 30-266 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 9.8E-35 3.4E-39 321.3 18.2 239 412-681 82-364 (413)
249 2vuw_A Serine/threonine-protei 100.0 5.1E-35 1.7E-39 314.4 10.5 245 406-681 18-332 (336)
250 3m2w_A MAP kinase-activated pr 100.0 1.1E-33 3.9E-38 298.8 20.3 223 413-682 23-258 (299)
251 4azs_A Methyltransferase WBDD; 99.9 4.7E-29 1.6E-33 285.7 3.6 186 415-612 241-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3E-26 1E-30 261.0 8.2 182 413-612 341-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.1E-22 3.7E-27 212.6 7.8 141 413-586 95-253 (282)
254 1zth_A RIO1 serine protein kin 99.8 8.9E-19 3E-23 180.5 9.9 134 412-561 51-219 (258)
255 3rgz_A Protein brassinosteroid 99.7 2.3E-17 8E-22 196.4 4.1 112 222-333 631-744 (768)
256 1ogq_A PGIP-2, polygalacturona 99.6 1.8E-16 6.1E-21 168.1 9.9 146 181-328 5-161 (313)
257 4gyi_A RIO2 kinase; protein ki 99.6 1.4E-16 4.9E-21 171.0 5.3 135 411-560 98-264 (397)
258 4ecn_A Leucine-rich repeat pro 99.6 1.7E-15 5.7E-20 180.6 8.7 141 182-327 269-526 (876)
259 4eco_A Uncharacterized protein 99.5 5.3E-15 1.8E-19 172.2 8.5 139 182-327 30-284 (636)
260 3oja_A Leucine-rich immune mol 99.5 5.7E-16 1.9E-20 174.4 -1.7 171 146-331 57-252 (487)
261 1ogq_A PGIP-2, polygalacturona 99.5 1.4E-15 4.9E-20 161.1 1.4 181 146-333 124-308 (313)
262 1p9a_G Platelet glycoprotein I 99.5 5.8E-14 2E-18 147.0 12.8 155 146-332 54-211 (290)
263 3m19_A Variable lymphocyte rec 99.5 6.7E-14 2.3E-18 143.2 12.6 157 147-332 35-195 (251)
264 2v70_A SLIT-2, SLIT homolog 2 99.5 3.1E-14 1.1E-18 142.7 9.5 152 151-332 15-169 (220)
265 2v9t_B SLIT homolog 2 protein 99.5 5.7E-14 2E-18 140.8 11.3 151 151-332 15-168 (220)
266 2o6q_A Variable lymphocyte rec 99.5 2.8E-13 9.5E-18 140.2 14.8 158 146-333 60-222 (270)
267 1w8a_A SLIT protein; signaling 99.5 5.9E-14 2E-18 137.5 8.9 122 211-332 9-142 (192)
268 2wfh_A SLIT homolog 2 protein 99.5 1E-13 3.6E-18 135.9 10.1 119 212-332 12-142 (193)
269 3rfs_A Internalin B, repeat mo 99.5 2.7E-13 9.1E-18 140.5 13.5 158 146-333 62-222 (272)
270 3rgz_A Protein brassinosteroid 99.5 2E-14 6.9E-19 171.1 5.0 83 246-328 631-716 (768)
271 1w8a_A SLIT protein; signaling 99.5 6.5E-14 2.2E-18 137.2 7.5 153 151-333 12-166 (192)
272 4fcg_A Uncharacterized protein 99.5 3.7E-14 1.2E-18 151.3 6.2 179 146-329 103-290 (328)
273 3e6j_A Variable lymphocyte rec 99.4 4.1E-13 1.4E-17 135.4 12.0 149 151-332 23-175 (229)
274 4fcg_A Uncharacterized protein 99.4 4.7E-14 1.6E-18 150.4 3.8 142 180-327 25-194 (328)
275 2v70_A SLIT-2, SLIT homolog 2 99.4 3E-13 1E-17 135.5 9.0 137 149-314 34-173 (220)
276 3e6j_A Variable lymphocyte rec 99.4 5.5E-13 1.9E-17 134.4 10.7 123 203-329 15-148 (229)
277 2o6r_A Variable lymphocyte rec 99.4 7.1E-13 2.4E-17 127.8 10.7 121 211-332 8-140 (177)
278 3zyj_A Leucine-rich repeat-con 99.4 1.5E-13 5.1E-18 152.7 6.2 180 146-333 111-296 (440)
279 1ozn_A Reticulon 4 receptor; N 99.4 5E-13 1.7E-17 139.3 9.8 158 146-332 79-241 (285)
280 2z66_A Variable lymphocyte rec 99.4 3.7E-13 1.3E-17 141.7 8.7 112 221-332 148-264 (306)
281 3m19_A Variable lymphocyte rec 99.4 1.2E-12 4.2E-17 133.7 12.0 137 145-310 57-195 (251)
282 1p9a_G Platelet glycoprotein I 99.4 9.2E-13 3.1E-17 137.8 9.6 108 220-329 74-185 (290)
283 2xot_A Amphoterin-induced prot 99.4 6.3E-13 2.1E-17 143.6 8.3 153 149-332 41-205 (361)
284 3g39_A Variable lymphocyte rec 99.4 9.5E-13 3.2E-17 126.2 8.4 104 225-332 11-118 (170)
285 2v9t_B SLIT homolog 2 protein 99.3 1.4E-12 4.8E-17 130.6 9.2 135 147-310 32-168 (220)
286 3zyi_A Leucine-rich repeat-con 99.3 3.8E-13 1.3E-17 149.9 5.5 180 146-333 122-307 (452)
287 3rfs_A Internalin B, repeat mo 99.3 2.9E-12 9.9E-17 132.6 11.5 139 145-312 83-223 (272)
288 3vq2_A TLR4, TOLL-like recepto 99.3 7.8E-13 2.7E-17 152.9 7.8 182 145-333 374-562 (606)
289 3v47_A TOLL-like receptor 5B a 99.3 3.1E-12 1.1E-16 142.4 12.1 112 221-333 297-412 (455)
290 4ezg_A Putative uncharacterize 99.3 1.1E-12 3.7E-17 128.9 7.3 150 145-327 42-192 (197)
291 2o6s_A Variable lymphocyte rec 99.3 4E-12 1.4E-16 125.9 11.4 135 148-311 29-165 (208)
292 2o6s_A Variable lymphocyte rec 99.3 6.9E-12 2.4E-16 124.1 13.0 149 152-332 12-164 (208)
293 3g39_A Variable lymphocyte rec 99.3 2.6E-12 8.8E-17 123.2 9.2 101 211-311 10-119 (170)
294 2ell_A Acidic leucine-rich nuc 99.3 1.8E-12 6.2E-17 123.7 7.9 136 146-313 23-165 (168)
295 4eco_A Uncharacterized protein 99.3 2.5E-12 8.5E-17 149.6 10.1 109 222-332 487-603 (636)
296 1ozn_A Reticulon 4 receptor; N 99.3 4.2E-12 1.4E-16 132.2 10.3 154 146-328 55-213 (285)
297 2r9u_A Variable lymphocyte rec 99.3 3.8E-12 1.3E-16 122.5 9.2 104 225-332 14-121 (174)
298 4g8a_A TOLL-like receptor 4; l 99.3 2.4E-12 8.3E-17 149.1 9.2 180 144-332 394-583 (635)
299 2o6q_A Variable lymphocyte rec 99.3 8.3E-12 2.9E-16 129.0 12.3 152 148-329 38-194 (270)
300 4ecn_A Leucine-rich repeat pro 99.3 5.7E-12 1.9E-16 150.2 11.7 107 222-330 727-841 (876)
301 3oja_B Anopheles plasmodium-re 99.3 9.8E-13 3.3E-17 151.9 4.6 107 223-331 254-360 (597)
302 2z62_A TOLL-like receptor 4, v 99.3 1.4E-12 4.9E-17 135.1 4.7 111 221-333 122-241 (276)
303 3o6n_A APL1; leucine-rich repe 99.3 1.3E-12 4.5E-17 142.5 4.5 107 223-331 248-354 (390)
304 3j0a_A TOLL-like receptor 5; m 99.3 6E-12 2E-16 151.3 10.7 108 222-332 450-563 (844)
305 2z62_A TOLL-like receptor 4, v 99.3 8E-12 2.7E-16 129.4 9.7 138 148-314 29-169 (276)
306 2z63_A TOLL-like receptor 4, v 99.3 3.7E-12 1.3E-16 145.9 7.6 113 221-333 419-535 (570)
307 2z66_A Variable lymphocyte rec 99.3 4.1E-12 1.4E-16 133.6 7.0 157 145-329 76-236 (306)
308 2wfh_A SLIT homolog 2 protein 99.3 1.1E-11 3.8E-16 121.3 9.6 90 222-311 53-143 (193)
309 2o6r_A Variable lymphocyte rec 99.3 1.6E-11 5.5E-16 118.2 10.5 130 151-311 11-141 (177)
310 3oja_B Anopheles plasmodium-re 99.3 8.1E-12 2.8E-16 144.2 9.7 157 141-327 45-203 (597)
311 3t6q_A CD180 antigen; protein- 99.2 7.4E-12 2.5E-16 144.7 9.3 177 145-332 374-563 (606)
312 2r9u_A Variable lymphocyte rec 99.2 1.2E-11 4E-16 119.0 8.9 89 223-312 33-122 (174)
313 2xot_A Amphoterin-induced prot 99.2 1.2E-11 4.1E-16 133.5 10.0 147 151-328 22-175 (361)
314 3tm0_A Aminoglycoside 3'-phosp 99.2 2.5E-11 8.6E-16 124.6 11.8 138 412-559 18-212 (263)
315 1wwl_A Monocyte differentiatio 99.2 3.1E-12 1.1E-16 135.2 5.0 101 222-327 200-307 (312)
316 3v47_A TOLL-like receptor 5B a 99.2 1.1E-11 3.6E-16 138.0 9.3 140 144-312 272-413 (455)
317 4g8a_A TOLL-like receptor 4; l 99.2 8.8E-12 3E-16 144.3 9.0 138 148-314 53-193 (635)
318 2ell_A Acidic leucine-rich nuc 99.2 1.1E-11 3.7E-16 118.3 7.9 105 222-328 23-132 (168)
319 2ifg_A High affinity nerve gro 99.2 7E-12 2.4E-16 134.4 7.3 103 227-332 12-119 (347)
320 2je0_A Acidic leucine-rich nuc 99.2 5.8E-12 2E-16 117.6 5.7 105 223-328 17-125 (149)
321 1m9s_A Internalin B; cell inva 99.2 2.4E-11 8.1E-16 139.8 11.7 147 146-330 64-211 (605)
322 3o6n_A APL1; leucine-rich repe 99.2 1.7E-11 5.9E-16 133.6 9.9 157 141-327 39-197 (390)
323 1xku_A Decorin; proteoglycan, 99.2 3.1E-11 1.1E-15 128.4 11.3 174 147-330 121-307 (330)
324 1h6t_A Internalin B; cell adhe 99.2 1.3E-11 4.5E-16 129.1 8.1 146 146-330 67-214 (291)
325 1dce_A Protein (RAB geranylger 99.2 2.3E-12 7.8E-17 147.3 2.5 181 144-329 346-546 (567)
326 3vq2_A TLR4, TOLL-like recepto 99.2 9.1E-12 3.1E-16 143.9 7.5 175 145-329 348-534 (606)
327 1h6u_A Internalin H; cell adhe 99.2 6.5E-12 2.2E-16 132.5 5.3 170 146-330 62-231 (308)
328 2id5_A Lingo-1, leucine rich r 99.2 3E-12 1E-16 143.5 2.5 108 223-332 224-336 (477)
329 4glp_A Monocyte differentiatio 99.2 2.6E-11 8.8E-16 128.0 9.5 154 145-329 143-307 (310)
330 1dce_A Protein (RAB geranylger 99.2 2.1E-11 7.3E-16 139.3 9.4 89 221-311 461-550 (567)
331 3a79_B TLR6, VLRB.59, TOLL-lik 99.2 2.8E-11 9.5E-16 138.7 9.6 157 145-332 351-513 (562)
332 2je0_A Acidic leucine-rich nuc 99.2 8.5E-12 2.9E-16 116.5 4.3 82 224-307 43-126 (149)
333 3o53_A Protein LRIM1, AGAP0063 99.2 3E-12 1E-16 135.6 0.7 106 223-331 144-252 (317)
334 4glp_A Monocyte differentiatio 99.2 9.3E-12 3.2E-16 131.3 4.4 173 147-329 91-285 (310)
335 4b8c_D Glucose-repressible alc 99.2 8.2E-12 2.8E-16 147.1 4.4 91 222-314 246-336 (727)
336 2z7x_B TOLL-like receptor 1, v 99.2 5.5E-11 1.9E-15 134.7 10.7 156 145-332 322-484 (520)
337 1ziw_A TOLL-like receptor 3; i 99.2 7.2E-11 2.5E-15 138.4 11.8 179 145-333 428-626 (680)
338 1xku_A Decorin; proteoglycan, 99.2 2.3E-11 7.8E-16 129.5 6.8 175 146-329 99-276 (330)
339 3zyi_A Leucine-rich repeat-con 99.2 2.5E-11 8.4E-16 135.2 6.9 178 145-329 97-279 (452)
340 2id5_A Lingo-1, leucine rich r 99.1 5.7E-11 2E-15 133.1 9.8 137 146-311 55-193 (477)
341 3j0a_A TOLL-like receptor 5; m 99.1 6.7E-11 2.3E-15 142.1 10.8 152 147-326 24-184 (844)
342 4b8c_D Glucose-repressible alc 99.1 9.7E-12 3.3E-16 146.5 3.4 139 145-314 222-361 (727)
343 2xwt_C Thyrotropin receptor; s 99.1 2.3E-11 7.7E-16 123.2 5.6 149 148-327 32-190 (239)
344 2z80_A TOLL-like receptor 2, v 99.1 6.2E-12 2.1E-16 135.2 1.5 181 146-332 99-317 (353)
345 2ft3_A Biglycan; proteoglycan, 99.1 8.2E-11 2.8E-15 125.3 10.0 173 147-330 123-308 (332)
346 2ifg_A High affinity nerve gro 99.1 5.1E-11 1.7E-15 127.7 8.2 122 211-333 9-145 (347)
347 4ezg_A Putative uncharacterize 99.1 3.6E-11 1.2E-15 118.0 6.2 131 146-308 65-195 (197)
348 3zyj_A Leucine-rich repeat-con 99.1 3.3E-11 1.1E-15 133.7 6.6 178 145-329 86-268 (440)
349 2z80_A TOLL-like receptor 2, v 99.1 2.9E-11 9.8E-16 130.0 5.8 149 148-326 53-208 (353)
350 2z81_A CD282 antigen, TOLL-lik 99.1 6.9E-11 2.4E-15 134.8 9.1 177 147-332 310-513 (549)
351 1wwl_A Monocyte differentiatio 99.1 8E-11 2.7E-15 124.3 8.8 152 146-327 120-285 (312)
352 1xeu_A Internalin C; cellular 99.1 9E-11 3.1E-15 120.8 8.8 148 146-331 40-187 (263)
353 1h6t_A Internalin B; cell adhe 99.1 7.9E-11 2.7E-15 123.1 8.4 147 145-328 44-190 (291)
354 2z81_A CD282 antigen, TOLL-lik 99.1 4.5E-11 1.5E-15 136.3 7.1 116 211-327 5-134 (549)
355 3oja_A Leucine-rich immune mol 99.1 2.9E-11 1E-15 135.9 5.4 176 146-329 33-227 (487)
356 2z63_A TOLL-like receptor 4, v 99.1 6.1E-11 2.1E-15 135.7 8.1 164 145-314 371-538 (570)
357 4fmz_A Internalin; leucine ric 99.1 6.7E-11 2.3E-15 126.6 7.8 170 145-327 175-344 (347)
358 1ziw_A TOLL-like receptor 3; i 99.1 8.3E-11 2.8E-15 137.8 9.2 151 147-326 25-181 (680)
359 1nd4_A Aminoglycoside 3'-phosp 99.1 2.3E-10 7.8E-15 116.9 11.2 128 417-559 29-213 (264)
360 2ft3_A Biglycan; proteoglycan, 99.1 2.6E-10 8.8E-15 121.4 11.5 174 146-330 101-278 (332)
361 3t6q_A CD180 antigen; protein- 99.1 6.5E-11 2.2E-15 136.7 6.8 177 146-326 277-459 (606)
362 1m9s_A Internalin B; cell inva 99.1 7.8E-11 2.7E-15 135.5 7.3 147 145-328 41-187 (605)
363 1xeu_A Internalin C; cellular 99.1 1.2E-10 4.2E-15 119.8 7.7 131 146-315 62-192 (263)
364 2xwt_C Thyrotropin receptor; s 99.1 1.2E-10 4.2E-15 117.7 7.4 152 146-327 79-237 (239)
365 2z7x_B TOLL-like receptor 1, v 99.1 1.1E-10 3.6E-15 132.3 7.6 176 146-328 246-433 (520)
366 1h6u_A Internalin H; cell adhe 99.1 9.7E-11 3.3E-15 123.5 6.5 170 145-329 39-208 (308)
367 1a9n_A U2A', U2A'; complex (nu 99.1 2.2E-10 7.5E-15 110.2 8.2 104 223-330 19-127 (176)
368 1a9n_A U2A', U2A'; complex (nu 99.1 1.1E-10 3.6E-15 112.4 5.9 37 145-181 17-53 (176)
369 3cvr_A Invasion plasmid antige 99.1 2.3E-10 7.8E-15 130.3 9.5 145 147-315 100-251 (571)
370 3cvr_A Invasion plasmid antige 99.1 6.9E-10 2.4E-14 126.4 13.3 94 223-328 140-242 (571)
371 1o6v_A Internalin A; bacterial 99.0 2.5E-10 8.4E-15 127.6 9.2 170 146-330 220-389 (466)
372 3a79_B TLR6, VLRB.59, TOLL-lik 99.0 3.6E-10 1.2E-14 129.4 9.2 175 147-328 276-462 (562)
373 3bz5_A Internalin-J, INLJ; leu 99.0 1.2E-09 4.2E-14 121.6 13.0 153 146-319 105-257 (457)
374 1o6v_A Internalin A; bacterial 99.0 4.6E-10 1.6E-14 125.4 8.8 168 145-327 175-342 (466)
375 3dxp_A Putative acyl-COA dehyd 99.0 1.3E-09 4.5E-14 117.3 11.5 140 414-560 44-248 (359)
376 3o53_A Protein LRIM1, AGAP0063 99.0 1.2E-10 4E-15 123.4 3.0 138 146-314 119-258 (317)
377 3g06_A SSPH2 (leucine-rich rep 99.0 1E-09 3.6E-14 126.3 10.3 84 223-314 221-304 (622)
378 3g06_A SSPH2 (leucine-rich rep 99.0 3.5E-09 1.2E-13 122.0 14.0 94 224-329 202-297 (622)
379 3bz5_A Internalin-J, INLJ; leu 99.0 2.2E-09 7.4E-14 119.6 11.9 163 145-327 40-202 (457)
380 2ca6_A RAN GTPase-activating p 98.9 6.1E-11 2.1E-15 129.1 -1.5 181 145-329 92-316 (386)
381 1jl5_A Outer protein YOPM; leu 98.9 1.9E-09 6.5E-14 119.9 9.7 36 145-183 235-270 (454)
382 3sg8_A APH(2'')-ID; antibiotic 98.9 1.3E-09 4.6E-14 114.4 5.7 186 414-614 26-289 (304)
383 4fmz_A Internalin; leucine ric 98.9 4E-09 1.4E-13 112.7 9.4 145 146-326 65-209 (347)
384 1jl5_A Outer protein YOPM; leu 98.8 9.6E-09 3.3E-13 114.2 12.0 138 147-327 131-268 (454)
385 2ca6_A RAN GTPase-activating p 98.8 2.1E-10 7.1E-15 124.8 -3.1 162 146-311 121-320 (386)
386 1ds9_A Outer arm dynein; leuci 98.8 5.4E-11 1.9E-15 116.8 -7.3 89 222-312 69-158 (198)
387 4ay9_X Follicle-stimulating ho 98.7 6.9E-09 2.3E-13 111.3 6.2 102 212-314 11-124 (350)
388 2ast_B S-phase kinase-associat 98.7 5E-10 1.7E-14 119.1 -2.8 175 147-327 70-258 (336)
389 2ast_B S-phase kinase-associat 98.7 4.1E-10 1.4E-14 119.7 -4.4 177 145-326 91-282 (336)
390 1ds9_A Outer arm dynein; leuci 98.7 3.5E-10 1.2E-14 111.0 -5.8 104 222-330 47-154 (198)
391 3goz_A Leucine-rich repeat-con 98.6 2.6E-09 9E-14 115.1 -0.8 141 147-311 22-184 (362)
392 3goz_A Leucine-rich repeat-con 98.6 6.2E-09 2.1E-13 112.1 -0.1 152 152-328 3-179 (362)
393 1z7x_W Ribonuclease inhibitor; 98.5 3E-09 1E-13 118.3 -4.0 105 222-326 255-380 (461)
394 1z7x_W Ribonuclease inhibitor; 98.5 5.4E-09 1.9E-13 116.2 -2.3 162 146-308 226-412 (461)
395 2jwp_A Malectin, MGC80075; sug 98.5 7.3E-08 2.5E-12 92.2 5.8 140 19-173 19-170 (174)
396 4ay9_X Follicle-stimulating ho 98.5 2.1E-07 7.3E-12 99.5 8.2 137 152-319 85-226 (350)
397 3d1u_A Putative fructosamine-3 98.4 1E-06 3.4E-11 91.6 12.6 74 414-491 21-97 (288)
398 3r70_A Aminoglycoside phosphot 98.4 7.1E-07 2.4E-11 94.2 10.5 131 414-560 43-237 (320)
399 3un9_A NLR family member X1; l 98.4 2.3E-08 8E-13 108.0 -1.9 138 147-308 101-253 (372)
400 3rw6_A Nuclear RNA export fact 98.4 1.1E-07 3.7E-12 97.2 2.7 64 223-287 170-237 (267)
401 3tdw_A Gentamicin resistance p 98.3 3.6E-06 1.2E-10 88.2 11.6 135 414-560 25-224 (306)
402 3ats_A Putative uncharacterize 98.2 3.5E-06 1.2E-10 90.1 9.9 79 414-492 26-121 (357)
403 4gkh_A Aminoglycoside 3'-phosp 98.2 7.4E-06 2.5E-10 83.8 11.8 134 415-559 31-222 (272)
404 3un9_A NLR family member X1; l 98.2 6.8E-08 2.3E-12 104.3 -4.0 154 146-327 71-250 (372)
405 3sb4_A Hypothetical leucine ri 98.2 3.4E-06 1.2E-10 89.3 8.6 92 222-316 225-318 (329)
406 3rw6_A Nuclear RNA export fact 98.1 2.8E-07 9.6E-12 94.1 -0.9 82 228-312 148-238 (267)
407 3ovc_A Hygromycin-B 4-O-kinase 98.1 8.3E-06 2.8E-10 87.6 10.3 73 414-492 47-122 (362)
408 2olc_A MTR kinase, methylthior 97.9 5E-05 1.7E-09 82.4 11.6 74 414-489 36-120 (397)
409 2q83_A YTAA protein; 2635576, 97.9 5.1E-05 1.7E-09 80.2 11.2 140 415-559 39-251 (346)
410 3f7w_A Putative fructosamine-3 97.8 0.00012 4E-09 75.7 11.7 74 414-491 21-97 (288)
411 3ogk_B Coronatine-insensitive 97.8 6.7E-07 2.3E-11 102.5 -6.2 65 243-307 432-501 (592)
412 3jr1_A Putative fructosamine-3 97.7 0.00018 6.2E-09 75.2 12.0 138 414-556 42-232 (312)
413 2pyw_A Uncharacterized protein 97.6 9.3E-05 3.2E-09 81.0 9.1 79 530-609 232-313 (420)
414 3sb4_A Hypothetical leucine ri 97.6 5.5E-05 1.9E-09 79.9 5.9 15 146-160 48-62 (329)
415 1io0_A Tropomodulin; LRR prote 97.6 7.4E-06 2.5E-10 79.0 -1.0 84 224-307 66-164 (185)
416 2ra8_A Uncharacterized protein 97.4 2.9E-05 9.9E-10 83.1 1.4 104 223-326 193-317 (362)
417 1io0_A Tropomodulin; LRR prote 97.4 1.2E-05 4.2E-10 77.4 -1.9 86 223-308 36-137 (185)
418 3ogk_B Coronatine-insensitive 97.4 0.00011 3.6E-09 84.1 5.1 87 223-311 220-310 (592)
419 3csv_A Aminoglycoside phosphot 97.3 0.0015 5.3E-08 68.7 12.6 141 415-560 25-217 (333)
420 2ppq_A HSK, HK, homoserine kin 97.2 0.00097 3.3E-08 69.8 9.7 143 414-559 28-216 (322)
421 3e4g_A ATP synthase subunit S, 97.1 4.6E-05 1.6E-09 72.2 -1.7 83 223-305 61-150 (176)
422 3dxq_A Choline/ethanolamine ki 97.0 0.002 6.8E-08 66.8 10.3 70 414-491 24-95 (301)
423 2p1m_B Transport inhibitor res 97.0 3.7E-05 1.3E-09 87.9 -3.6 105 222-328 396-518 (594)
424 2p1m_B Transport inhibitor res 97.0 7.2E-05 2.5E-09 85.5 -1.2 83 223-305 105-195 (594)
425 1nw1_A Choline kinase (49.2 KD 97.0 0.0018 6.2E-08 70.9 9.4 72 414-491 79-159 (429)
426 1zyl_A Hypothetical protein YI 96.8 0.009 3.1E-07 62.4 13.4 141 415-559 33-222 (328)
427 2qg7_A Ethanolamine kinase PV0 96.8 0.006 2.1E-07 67.2 12.3 73 414-491 114-188 (458)
428 3feg_A Choline/ethanolamine ki 96.8 0.0033 1.1E-07 67.4 9.8 141 414-559 56-253 (379)
429 3rfe_A Platelet glycoprotein I 96.7 0.0018 6.1E-08 58.2 5.4 55 227-283 12-68 (130)
430 3rfe_A Platelet glycoprotein I 96.6 0.0023 7.7E-08 57.6 5.6 54 251-306 12-67 (130)
431 2ra8_A Uncharacterized protein 96.6 0.00023 7.9E-09 76.1 -1.2 84 222-309 171-267 (362)
432 3c5i_A Choline kinase; choline 96.5 0.0057 2E-07 65.3 9.2 73 414-491 39-121 (369)
433 3i1a_A Spectinomycin phosphotr 96.5 0.01 3.5E-07 62.6 10.9 68 417-491 32-108 (339)
434 4fdw_A Leucine rich hypothetic 96.3 0.0042 1.4E-07 67.3 6.6 59 242-301 266-330 (401)
435 4fdw_A Leucine rich hypothetic 96.1 0.0068 2.3E-07 65.6 6.6 89 222-314 270-364 (401)
436 3f2s_A CK, chetk-alpha, cholin 95.5 0.05 1.7E-06 58.5 10.6 141 415-559 59-279 (401)
437 3mes_A Choline kinase; malaria 94.5 0.15 5.3E-06 55.2 11.0 73 414-491 76-157 (424)
438 1pgv_A TMD-1, tropomodulin TMD 94.2 0.0051 1.7E-07 59.3 -1.5 83 223-305 41-137 (197)
439 3e4g_A ATP synthase subunit S, 94.0 0.011 3.7E-07 55.8 0.3 69 239-307 53-128 (176)
440 2yle_A Protein spire homolog 1 93.8 0.34 1.2E-05 47.0 10.4 100 489-608 33-132 (229)
441 4fs7_A Uncharacterized protein 92.4 0.12 4E-06 55.5 5.6 79 223-304 297-376 (394)
442 1pgv_A TMD-1, tropomodulin TMD 91.9 0.031 1.1E-06 53.8 0.1 83 224-306 71-169 (197)
443 4h09_A Hypothetical leucine ri 91.7 0.2 6.8E-06 53.2 6.2 77 224-302 241-318 (379)
444 4gt6_A Cell surface protein; l 90.9 0.28 9.7E-06 52.4 6.6 99 223-326 265-367 (394)
445 4gt6_A Cell surface protein; l 90.0 0.51 1.7E-05 50.4 7.6 78 224-304 289-367 (394)
446 4h09_A Hypothetical leucine ri 88.8 0.52 1.8E-05 49.9 6.5 77 224-302 264-341 (379)
447 4fs7_A Uncharacterized protein 86.2 0.42 1.4E-05 51.1 3.8 73 223-299 320-393 (394)
448 4ann_A ESSB; membrane protein, 80.5 3.7 0.00013 39.6 7.4 116 462-613 43-158 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 79.9 0.18 6.2E-06 55.4 -2.4 59 413-474 147-214 (463)
450 4ano_A ESSB; membrane protein, 75.6 4.7 0.00016 39.0 6.5 115 462-613 48-163 (219)
451 1nrp_R Receptor based peptide 65.1 2.1 7.3E-05 24.8 0.9 15 13-27 7-21 (26)
452 1nro_R Receptor based peptide 62.6 2.6 8.8E-05 24.7 0.9 15 13-27 7-21 (27)
453 3g15_A CK, chetk-alpha, cholin 57.2 5 0.00017 42.7 2.9 29 531-559 245-279 (401)
454 2jwa_A Receptor tyrosine-prote 50.9 1.5 5.1E-05 30.6 -1.7 7 342-348 14-20 (44)
455 2lz0_A Uncharacterized protein 27.3 79 0.0027 26.0 4.9 38 265-303 15-52 (100)
456 2kdd_A Borealin; protein dimer 26.8 24 0.00083 26.9 1.4 15 104-118 3-17 (76)
457 2k1k_A Ephrin type-A receptor 26.7 6.5 0.00022 26.5 -1.6 9 342-350 13-21 (38)
458 2lz0_A Uncharacterized protein 24.2 1.5E+02 0.005 24.3 6.0 48 233-281 6-54 (100)
459 2l6w_A Beta-type platelet-deri 29.9 16 0.00056 24.4 0.0 6 364-369 31-36 (39)
460 1cja_A Protein (actin-fragmin 23.6 3.2E+02 0.011 27.9 9.5 78 477-560 155-237 (342)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.2e-52 Score=444.00 Aligned_cols=257 Identities=26% Similarity=0.428 Sum_probs=205.8
Q ss_pred HhhccccccCceEEEEEEEC------CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 411 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35788999999999999874 478899999987665566789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccc-----------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEE
Q 004689 485 FMHNGTLKEHLYGTLT-----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 553 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~ 553 (736)
||++|+|.++++.... ....++|..++.|+.|+|+||+|||+. +|+||||||+||||++++++||+
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence 9999999999975432 124589999999999999999999998 99999999999999999999999
Q ss_pred eecCCccccCCCC-cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHh
Q 004689 554 DFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 631 (736)
Q Consensus 554 DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~ 631 (736)
|||+|+....... .......||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.... .+...
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~---- 272 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----EAIDC---- 272 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH----HHHHH----
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH----HHHHH----
Confidence 9999986544332 23345679999999999999999999999999999999999 89999865422 22222
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
+..+... ..+.....++.+++.+|++.||++||||.||+++|+.+..
T Consensus 273 i~~g~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 273 ITQGREL---------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHTCCC---------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHcCCCC---------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 2222111 1112233468899999999999999999999999998753
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.3e-52 Score=441.85 Aligned_cols=257 Identities=27% Similarity=0.474 Sum_probs=211.1
Q ss_pred HHhhccccccCceEEEEEEEC------CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
+.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..++||
T Consensus 15 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~ 94 (299)
T 4asz_A 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF 94 (299)
T ss_dssp EEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence 346789999999999999874 47789999998766556678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhccc---------ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 004689 484 EFMHNGTLKEHLYGTL---------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 554 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~D 554 (736)
|||++|+|.++|+... .....++|..++.++.|+|+||.|||++ +|+||||||+||||+.++++||+|
T Consensus 95 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~D 171 (299)
T 4asz_A 95 EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGD 171 (299)
T ss_dssp ECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred EcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECC
Confidence 9999999999997532 1234689999999999999999999998 999999999999999999999999
Q ss_pred ecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhh
Q 004689 555 FGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 555 FGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
||+|+........ ......||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.... .+... +
T Consensus 172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~----i 243 (299)
T 4asz_A 172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIEC----I 243 (299)
T ss_dssp CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHH----H
T ss_pred cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH----H
Confidence 9999865433222 2233569999999999999999999999999999999999 89999865522 22222 2
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
..+.... .+.....++.+++.+|++.||++||||+||++.|+++.
T Consensus 244 ~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 244 TQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2222111 12223346889999999999999999999999998864
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.7e-53 Score=447.13 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=210.8
Q ss_pred HHHhhccccccCceEEEEEEEC------CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 481 (736)
..+|.++||+|+||+||+|++. +++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3457789999999999999873 467899999975433 335679999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhccc------------ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc
Q 004689 482 VYEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR 549 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~ 549 (736)
|||||++|+|.++|.... .....++|..++.|+.|+|+||+|||++ +||||||||+||||+++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 999999999999996532 1234689999999999999999999998 9999999999999999999
Q ss_pred EEEEeecCCccccCCC-CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHH
Q 004689 550 AKVSDFGLSKFAVDGA-SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQW 627 (736)
Q Consensus 550 ~kl~DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~ 627 (736)
+||+|||+|+...... ........||+.|||||++.++.|+.++|||||||+||||+| |+.||.+... ..+...
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~----~~~~~~ 259 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDVVEM 259 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH----HHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH----HHHHHH
Confidence 9999999998654332 223345679999999999999999999999999999999998 8999986552 223322
Q ss_pred HHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 004689 628 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 685 (736)
Q Consensus 628 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 685 (736)
+..+.... .+......+.+++.+|++.||++||||.||+++|+.+
T Consensus 260 ----i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 ----IRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----HHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22232211 1223345688999999999999999999999999754
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-51 Score=430.83 Aligned_cols=254 Identities=31% Similarity=0.520 Sum_probs=199.5
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 411 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
.+.++||+|+||+||+|+++ ..||||+++... ....+.|.+|+++|++++|||||+++|+|.+ +..++|||||++
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~g 115 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEG 115 (307)
T ss_dssp CEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSS
T ss_pred EEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCC
Confidence 46789999999999999876 369999987543 2334679999999999999999999999865 467999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC-Cc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-SH 567 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~-~~ 567 (736)
|+|.++|+.. ...+++..++.|+.|+|+||+|||++ +||||||||+||||++++++||+|||+|+...... ..
T Consensus 116 GsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 116 SSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999643 35699999999999999999999998 99999999999999999999999999998654322 22
Q ss_pred ceecccccccccCcccccc---CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 568 VSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~---~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.....+||+.|||||++.+ +.|+.++|||||||+||||+||+.||.+.... ..+ ......+.. .+.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~---~~~----~~~~~~~~~----~p~ 258 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR---DQI----IFMVGRGYA----SPD 258 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHH----HHHHHTTCC----CCC
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH---HHH----HHHHhcCCC----CCC
Confidence 3445679999999999964 46899999999999999999999999765421 111 111222211 111
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 685 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 685 (736)
+. .........+.+++.+|++.||++||||.||+++|+.+
T Consensus 259 ~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 259 LS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp ST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred cc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11 11223345688999999999999999999999999865
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.7e-50 Score=430.13 Aligned_cols=250 Identities=22% Similarity=0.275 Sum_probs=204.0
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCCC
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 489 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~g 489 (736)
.+.++||+|+||+||+|++. +|+.||||+++.. ....+|+.+|++++|||||++++++.+++..++|||||++|
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~-----~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-----VFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT-----TCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHH-----HhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 45678999999999999976 6899999999643 22357999999999999999999999999999999999999
Q ss_pred CHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC-cEEEEeecCCccccCCCCc-
Q 004689 490 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGASH- 567 (736)
Q Consensus 490 sL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~-~~kl~DFGla~~~~~~~~~- 567 (736)
+|.++|.. ...+++..+..++.|++.||+|||++ +|+||||||+||||+.++ ++||+|||+|+........
T Consensus 136 ~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 136 SLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp BHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 99999953 45699999999999999999999998 999999999999999987 6999999999876433211
Q ss_pred ---ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 568 ---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 568 ---~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+....+.. +... . ..
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--------~~~~-~--~~ 277 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS--------EPPP-I--RE 277 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH--------SCCG-G--GG
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc--------CCCC-c--hh
Confidence 22345799999999999999999999999999999999999999987653332222211 1100 0 01
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
+ +......+.+++.+|++.||++|||+.|++++|...+.
T Consensus 278 ~----~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 278 I----PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp S----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c----CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 1 12223458899999999999999999999999988764
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.1e-50 Score=430.68 Aligned_cols=248 Identities=24% Similarity=0.332 Sum_probs=206.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
|.+.++||+|+||+||+|++. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+|||||++
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 155 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 344578999999999999986 6899999999766555667789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||||+.++++||+|||+|+....... .
T Consensus 156 g~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 226 (346)
T 4fih_A 156 GALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 226 (346)
T ss_dssp EEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-C
T ss_pred CcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-c
Confidence 999998852 4589999999999999999999998 999999999999999999999999999986644332 3
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCc
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 648 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 648 (736)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... .+...+. .+.. +.+..
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~----~~~~-----~~~~~- 292 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIR----DNLP-----PRLKN- 292 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHH----HSSC-----CCCSC-
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHHH----cCCC-----CCCCc-
Confidence 34567999999999999999999999999999999999999999765421 1222111 1110 11110
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 649 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 649 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
......++.+++.+|++.||++|||+.|+++|
T Consensus 293 -~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 -LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11123457899999999999999999999875
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-49 Score=415.49 Aligned_cols=247 Identities=28% Similarity=0.433 Sum_probs=196.4
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeee----CCeEEEEE
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 483 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----~~~~~lV~ 483 (736)
.++++||+|+||+||+|.+. ++..||+|++.... ......|.+|+++|++++|||||+++++|.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999876 68899999986542 2234568999999999999999999999865 35679999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-CCcEEEEeecCCcccc
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAV 562 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~-~~~~kl~DFGla~~~~ 562 (736)
|||++|+|.+++.. ...+++..+..++.|++.||+|||++. ++|+||||||+||||+. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999953 456899999999999999999999971 13999999999999985 7999999999998543
Q ss_pred CCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 563 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 563 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.... ..+. ..+..+.....++
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~---~~~~----~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA---AQIY----RRVTSGVKPASFD 252 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---HHHH----HHHTTTCCCGGGG
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH---HHHH----HHHHcCCCCCCCC
Confidence 2 23345679999999998864 6999999999999999999999999754311 1111 1222221111111
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. ...++.+++.+|++.||++|||+.|+++|
T Consensus 253 ----~~----~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 ----KV----AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GC----CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----cc----CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 12357889999999999999999999875
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-49 Score=420.39 Aligned_cols=265 Identities=22% Similarity=0.344 Sum_probs=202.1
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCC----eEEEEEEec
Q 004689 411 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYEFM 486 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----~~~lV~e~~ 486 (736)
.++++||+|+||+||+|++. |+.||||+++.... ....++.|+..+.+++|||||+++++|.+++ ..+||||||
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 45789999999999999985 89999999864422 1223445677778899999999999998654 579999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCC-----CCceecCCCCCCCEEEcCCCcEEEEeecCCccc
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~-----~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
++|+|.++|+. ..++|..+++++.|+++||+|||+++ .++|+||||||+||||+.++++||+|||+|+..
T Consensus 84 ~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 84 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp TTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999953 45899999999999999999999863 358999999999999999999999999999876
Q ss_pred cCCCCc---ceecccccccccCccccccC------cCCCcchhHHHHHHHHHHHhCCCcCcccccccc--------cccH
Q 004689 562 VDGASH---VSSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISGQEAISNEKFGAN--------CRNI 624 (736)
Q Consensus 562 ~~~~~~---~~~~~~gt~~Y~aPE~~~~~------~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~--------~~~l 624 (736)
...... .....+||+.|||||++.+. .++.++|||||||+||||+||..|+......+. ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 22345799999999999754 477899999999999999999888754321110 0111
Q ss_pred HHHHHHhhhcCCcceeccCccCCcC-CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 625 VQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 625 ~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
... ......+ .+++.+.... +.+....+.+++.+|++.||++||||.||++.|+++..
T Consensus 239 ~~~-~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 239 EEM-RKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHH-HHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH-HHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 122 1111111 1223332222 34566788999999999999999999999999998754
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.2e-50 Score=431.15 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=199.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
|.+.+.||+|+||+||+|++. +|+.||||++..... .....+.+|+++|++++|||||++++++.+++..++|||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~ 105 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC 105 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 556789999999999999876 689999999975432 23457899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++|+|.++|... ....+++..++.++.|++.||+|||++ +|+||||||+||||+.++++||+|||+|+..... .
T Consensus 106 ~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 179 (350)
T 4b9d_A 106 EGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-V 179 (350)
T ss_dssp TTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-H
T ss_pred CCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC-c
Confidence 999999999642 234578889999999999999999998 9999999999999999999999999999865322 1
Q ss_pred cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccC
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 646 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 646 (736)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... .+.. .. ..+... .+.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~----~~~~---~i-~~~~~~-----~~~ 246 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK----NLVL---KI-ISGSFP-----PVS 246 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHH---HH-HHTCCC-----CCC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHH---HH-HcCCCC-----CCC
Confidence 2234567999999999999999999999999999999999999999865422 1111 11 122221 111
Q ss_pred CcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 647 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 647 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..+ ..++.+++.+|++.||++|||+.|++++
T Consensus 247 ~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 LHY----SYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccC----CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 222 2458899999999999999999999875
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4e-50 Score=432.21 Aligned_cols=264 Identities=26% Similarity=0.401 Sum_probs=212.4
Q ss_pred HHHHHHHhhccccccCceEEEEEEECC------CcEEEEEEeccCCcc-cchhhhhHHHHHhhcCC-CceeeEeeeeeeC
Q 004689 405 IEDATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHH-RNLVQFLGYCQEE 476 (736)
Q Consensus 405 i~~~~~~~~~~IG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~~~-~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~ 476 (736)
|....+.+.+.||+|+||+||+|.+.. ++.||||++...... ..+.|.+|+++|++++| ||||+++|+|.++
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 334455678899999999999998652 367999999765433 35679999999999965 9999999999764
Q ss_pred -CeEEEEEEecCCCCHHHHhhcccc------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEE
Q 004689 477 -GRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 543 (736)
Q Consensus 477 -~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NIL 543 (736)
+..++|||||++|+|.++|+.... ....+++..++.++.|+|+||+|||++ +||||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcccee
Confidence 568999999999999999975422 134589999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEeecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCccccccccc
Q 004689 544 LDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANC 621 (736)
Q Consensus 544 l~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~ 621 (736)
+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||+||||+| |+.||.+....+
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-- 295 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-- 295 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--
Confidence 999999999999999876544333 3345679999999999999999999999999999999998 999998654221
Q ss_pred ccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 622 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 622 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.+.. .+.++... . .+.....++.+++..|++.||++|||+.||+++|++++.
T Consensus 296 -~~~~----~i~~g~~~-----~----~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 296 -EFCR----RLKEGTRM-----R----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp -HHHH----HHHHTCCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHH----HHHcCCCC-----C----CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 1222 22222211 1 111223458899999999999999999999999999865
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.5e-50 Score=420.18 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=206.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++|++++|||||++++++.+++..++||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 567899999999999999876 68999999997542 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
|++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+|+......
T Consensus 114 ~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 114 AKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred CCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999995 345689999999999999999999998 99999999999999999999999999998764332
Q ss_pred -CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 566 -SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 566 -~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ +... +..+.+ .
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~----~~~~----i~~~~~------~ 252 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL----IFAK----IIKLEY------D 252 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHTCC------C
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHH----HHcCCC------C
Confidence 234456789999999999999999999999999999999999999998654222 2111 112221 1
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+....+ .++.+++.+|++.||++|||++|+..+
T Consensus 253 ~p~~~s----~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 253 FPEKFF----PKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCTTCC----HHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCcccC----HHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 111222 357899999999999999999997544
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3e-49 Score=431.94 Aligned_cols=248 Identities=24% Similarity=0.335 Sum_probs=206.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
|.+.++||+|+||+||+|++. +|+.||||++........+.+.+|+.+|++++|||||++++++.+++..|+|||||++
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 445678999999999999986 6899999999876666667789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||||+.++++||+|||+|+....... .
T Consensus 233 G~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 303 (423)
T 4fie_A 233 GALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 303 (423)
T ss_dssp EEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-C
T ss_pred CcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-c
Confidence 99999884 34589999999999999999999998 999999999999999999999999999986644332 3
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCc
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 648 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 648 (736)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... .+...+. .+.. +.+..
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~----~~~~-----~~~~~- 369 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIR----DNLP-----PRLKN- 369 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHH----HSCC-----CCCSC-
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHHH----cCCC-----CCCcc-
Confidence 34567999999999999999999999999999999999999999765421 1222111 1111 11110
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 649 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 649 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.......+.+++.+|+..||++|||+.|+++|
T Consensus 370 -~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 -LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01122357899999999999999999999875
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.9e-49 Score=408.32 Aligned_cols=245 Identities=23% Similarity=0.398 Sum_probs=190.0
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
.|.+.+.||+|+||+||+|+.. +|+.||||++..... .....+.+|+++|++++|||||++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 3567889999999999999875 689999999975432 224568999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+ +|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+|+...+.
T Consensus 94 y~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 94 YA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp CC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred CC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99 6899998853 45699999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCcceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
. .....+||+.|||||++.+..| +.++||||+||++|||++|+.||.+.... .+.+ .+..+...
T Consensus 166 ~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~----~~~~----~i~~~~~~----- 230 (275)
T 3hyh_A 166 N--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP----VLFK----NISNGVYT----- 230 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHTCCC-----
T ss_pred C--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH----HHHH----HHHcCCCC-----
Confidence 2 2345679999999999998876 57999999999999999999999865422 1211 11222211
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+.... ...+.+++.+|++.||++|||++|++++
T Consensus 231 -~p~~~----s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 231 -LPKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred -CCCCC----CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 11122 2357889999999999999999999876
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.4e-49 Score=414.23 Aligned_cols=246 Identities=26% Similarity=0.342 Sum_probs=194.7
Q ss_pred HHhhccccccCceEEEEEEEC----CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
|.+.+.||+|+||+||+|+.. +++.||||+++.... .....+.+|+++|++++|||||++++++.+++..++||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 105 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 567889999999999999863 478899999975432 23446888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
|||++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+|+....
T Consensus 106 Ey~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 106 DFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp CCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999999953 45689999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 564 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ +... +..+.+
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----~~~~----i~~~~~------ 243 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE----TMTM----ILKAKL------ 243 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHCCC------
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH----HHHH----HHcCCC------
Confidence 322 2345679999999999999999999999999999999999999998654221 2111 111211
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 681 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~ 681 (736)
...... ..++.+++.+|++.||++||| ++|+++|
T Consensus 244 ~~p~~~----s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 GMPQFL----SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp CCCTTS----CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CCCCcC----CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 111122 235789999999999999998 4666654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.7e-47 Score=400.04 Aligned_cols=249 Identities=24% Similarity=0.328 Sum_probs=186.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCC----------
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG---------- 477 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---------- 477 (736)
|.+.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 456789999999999999876 689999999875433 23457889999999999999999999987544
Q ss_pred --eEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEee
Q 004689 478 --RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 555 (736)
Q Consensus 478 --~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DF 555 (736)
..++|||||++|+|.+++.... ......+..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence 3689999999999999996542 223356667889999999999999998 9999999999999999999999999
Q ss_pred cCCccccCCCCc-----------ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccH
Q 004689 556 GLSKFAVDGASH-----------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 624 (736)
Q Consensus 556 Gla~~~~~~~~~-----------~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l 624 (736)
|+|+........ .....+||+.|||||++.+..|+.++|||||||++|||++ ||..... ..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~-----~~ 234 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-----RV 234 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----HH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-----HH
Confidence 999865433211 1234579999999999999999999999999999999996 6753220 01
Q ss_pred HHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 625 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 625 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... ........... .......+.+++.+|++.||++|||+.|++++
T Consensus 235 -~~~-~~~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 235 -RTL-TDVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHH-HHHHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHH-HHHhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111 11111111110 11222346789999999999999999999874
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.5e-44 Score=384.50 Aligned_cols=273 Identities=42% Similarity=0.744 Sum_probs=239.4
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 411 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
.+.+.||+|+||+||+|++.+++.||||++..........+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 121 (321)
T 2qkw_B 42 DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121 (321)
T ss_dssp SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCB
T ss_pred CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCc
Confidence 34678999999999999988899999999876655556779999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC-CCcce
Q 004689 491 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG-ASHVS 569 (736)
Q Consensus 491 L~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~-~~~~~ 569 (736)
|.+++.........+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 122 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp TGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 9999976544445689999999999999999999998 9999999999999999999999999999754322 22223
Q ss_pred ecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcC
Q 004689 570 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 649 (736)
Q Consensus 570 ~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 649 (736)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... +.....+..|.......+.+...+++.+....
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS-SSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC-cHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 34568999999999999999999999999999999999999998655 33445677787777777888888888888888
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 650 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 650 ~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
..+....+.+++.+|++.||++|||+.||+++|+.++.
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 88889999999999999999999999999999998864
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-44 Score=388.01 Aligned_cols=288 Identities=35% Similarity=0.656 Sum_probs=248.8
Q ss_pred cccCHHHHHHHHHH--hhccccccCceEEEEEEECCCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeee
Q 004689 398 HCFTLSDIEDATKM--LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 474 (736)
Q Consensus 398 ~~~~~~~i~~~~~~--~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 474 (736)
..+++.++.....+ +.+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 34666666655444 4688999999999999988899999999876543 23447899999999999999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 004689 475 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 554 (736)
Q Consensus 475 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~D 554 (736)
..+..++||||+++|+|.+++.........+++..+..++.|++.||.|||+.+.++|+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999987655566799999999999999999999998667999999999999999999999999
Q ss_pred ecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccccc-ccccccHHHHHHHhhh
Q 004689 555 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-GANCRNIVQWAKLHIE 633 (736)
Q Consensus 555 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~-~~~~~~l~~~~~~~~~ 633 (736)
||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..|......
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 999987655555555556799999999999988999999999999999999999999975432 2334567888888888
Q ss_pred cCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 004689 634 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 685 (736)
Q Consensus 634 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 685 (736)
...+....+..+...+..+....+.+++..|++.||.+|||+.||+++|++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 8888888998888888889999999999999999999999999999999863
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-44 Score=395.67 Aligned_cols=263 Identities=20% Similarity=0.283 Sum_probs=198.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeee------CCeEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRSV 480 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------~~~~~ 480 (736)
|.+.+.||+|+||+||+|++. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.. .+..|
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 556789999999999999876 799999999975432 234567899999999999999999998754 36789
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+|||||+ |+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 136 ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 136 VVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 9999996 679998843 45799999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCC---CcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 561 AVDGA---SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 561 ~~~~~---~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
+.... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+....+....+........ ...
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~-~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS-PAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC-GGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC-hHH
Confidence 54322 2233456899999999998875 568999999999999999999999987653222222211110000 000
Q ss_pred cceecc-------CccCC--cCCH-----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 637 IQGIID-------PSLLD--EYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 637 ~~~~~d-------~~l~~--~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
....-. ..+.. ..+. .....+.+|+.+|+..||++|||+.|+++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000 00000 0000 112357899999999999999999999876
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.3e-44 Score=385.73 Aligned_cols=195 Identities=25% Similarity=0.374 Sum_probs=166.2
Q ss_pred HHhhccccccCceEEEEEEEC----CCcEEEEEEeccCCcccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
|.+.++||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|+.+ +||||+++++++.+.++.++|||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 556789999999999999763 46789999986543 345678999999998 69999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC-CcEEEEeecCCccccC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVD 563 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~-~~~kl~DFGla~~~~~ 563 (736)
|+++|+|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 101 ~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 101 YLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp CCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred CCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 999999999883 378889999999999999999998 99999999999999877 7999999999975433
Q ss_pred CCC---------------------------cceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCccc
Q 004689 564 GAS---------------------------HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNE 615 (736)
Q Consensus 564 ~~~---------------------------~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~ 615 (736)
... ......+||+.|||||++.+. .|+.++||||+||++|||++|+.||...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 221 112345799999999999875 5899999999999999999999999644
Q ss_pred c
Q 004689 616 K 616 (736)
Q Consensus 616 ~ 616 (736)
.
T Consensus 251 ~ 251 (361)
T 4f9c_A 251 S 251 (361)
T ss_dssp S
T ss_pred C
Confidence 3
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.2e-44 Score=409.14 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=206.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
|.+.+.||+|+||+||+|+.+ +|+.||+|++..........+.+|+.+|+.++|||||++++++.++...++|||||++
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g 238 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence 556789999999999999876 6899999999766555567789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC--CcEEEEeecCCccccCCCC
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH--MRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~--~~~kl~DFGla~~~~~~~~ 566 (736)
|+|.++|.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 239 g~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 239 GELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 999999853 234689999999999999999999998 99999999999999864 89999999999876443
Q ss_pred cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccC
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 646 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 646 (736)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ +... +..+... ++....
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~----~~~~----i~~~~~~--~~~~~~ 380 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE----TLRN----VKSCDWN--MDDSAF 380 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHH----HHTTCCC--CCSGGG
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HHHH----HHhCCCC--CCcccc
Confidence 23345679999999999999999999999999999999999999998655221 1111 1111110 111111
Q ss_pred CcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 647 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 647 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
...+ ..+.+|+.+|++.||.+|||+.|+++|
T Consensus 381 ~~~s----~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 SGIS----EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1222 357889999999999999999999875
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.2e-43 Score=402.34 Aligned_cols=246 Identities=25% Similarity=0.331 Sum_probs=196.5
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhh---HHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTN---EVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~---E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
.+.+.||+|+||+||+|+.. +|+.||||++.+... .....+.+ ++.+++.++|||||++++++.+.+.+|+||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVm 271 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEE
Confidence 45688999999999999886 689999999965321 11222333 456677789999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
|||+||+|.++|. ....+++..+..++.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+....
T Consensus 272 Ey~~GGdL~~~l~----~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 272 DLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCCSCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999995 345689999999999999999999998 999999999999999999999999999986644
Q ss_pred CCCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 564 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
.. ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||.+...... ..+.... ....+
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~~i----~~~~~----- 411 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMT----LTMAV----- 411 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHHHH----HHCCC-----
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhh----cCCCC-----
Confidence 32 334679999999999974 5799999999999999999999999976542211 1121111 11111
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 681 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~ 681 (736)
.+...+ ..++.+++.+|++.||.+|++ ++||.+|
T Consensus 412 -~~p~~~----S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 412 -ELPDSF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -CCCTTS----CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -CCCccC----CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 111222 235789999999999999998 6888776
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.2e-42 Score=363.46 Aligned_cols=256 Identities=25% Similarity=0.395 Sum_probs=209.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
+.+.+.||+|+||+||+|.+. +++.||+|++..........+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 91 (310)
T 3s95_A 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91 (310)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCC
Confidence 445789999999999999886 6899999998766556677899999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 92 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 92 GTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999642 35689999999999999999999998 99999999999999999999999999998654332211
Q ss_pred -------------eecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccc--cccHHHHHHHhhh
Q 004689 569 -------------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN--CRNIVQWAKLHIE 633 (736)
Q Consensus 569 -------------~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~--~~~l~~~~~~~~~ 633 (736)
.....||+.|+|||++.+..++.++|||||||++|||++|..|+........ ...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-- 243 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY-- 243 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--
Confidence 1145699999999999999999999999999999999999999875432111 11222211111
Q ss_pred cCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 634 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 634 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
.... ....+.+++.+|++.||++|||+.|+++.|+.+...
T Consensus 244 -----------~~~~----~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 -----------CPPN----CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp -----------CCTT----CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------CCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 123478899999999999999999999999987644
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.2e-41 Score=361.85 Aligned_cols=259 Identities=31% Similarity=0.477 Sum_probs=201.1
Q ss_pred HHHHhhccccccCceEEEEEEECCCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
..+.+.+.||+|+||+||+|+.. ++.||||++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 37 ~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 3p86_A 37 CDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115 (309)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred hHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence 34556789999999999999875 89999999875532 2235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++....
T Consensus 116 ~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 116 LSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp CTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred CCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 99999999996432 234589999999999999999999998 7 99999999999999999999999999975433
Q ss_pred CCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 564 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+....... ... .
T Consensus 192 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~----~~~~~~~~~---~~~-----~ 258 (309)
T 3p86_A 192 TF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA----QVVAAVGFK---CKR-----L 258 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHHHHHS---CCC-----C
T ss_pred cc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhc---CCC-----C
Confidence 22 2233456999999999999999999999999999999999999999765421 122211111 100 0
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
.+ +......+.+++.+|++.+|.+|||+.||++.|+.++..
T Consensus 259 ~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 259 EI----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11 112234588999999999999999999999999988653
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.9e-41 Score=358.36 Aligned_cols=248 Identities=24% Similarity=0.350 Sum_probs=204.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
|.+.+.||+|+||+||+|... +++.||||++..........+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 101 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCC
Confidence 445688999999999999864 6899999999766555567789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 102 ~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 102 GSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 999999853 3588899999999999999999998 999999999999999999999999999976544332 2
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCc
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 648 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 648 (736)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+ ......+... . .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~----~~~~~~~~~~-~-------~ 237 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---AL----YLIATNGTPE-L-------Q 237 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH----HHHHHHCSCC-C-------S
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HH----HHHHhCCCCC-C-------C
Confidence 334569999999999999999999999999999999999999997654211 11 1111111110 0 0
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 649 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 649 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.+......+.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111223458899999999999999999999875
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-41 Score=371.52 Aligned_cols=261 Identities=23% Similarity=0.434 Sum_probs=210.5
Q ss_pred HHHhhccccccCceEEEEEEEC--------CCcEEEEEEeccCCc-ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCe
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 478 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~ 478 (736)
.+.+.+.||+|+||.||+|++. ++..||||+++.... .....+.+|+++++++ +||||++++++|...+.
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~ 161 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence 3456789999999999999863 356799999975532 2345689999999999 89999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhcccc------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC
Q 004689 479 SVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 546 (736)
Q Consensus 479 ~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~ 546 (736)
.++||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+|||++.
T Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 238 (370)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECC
Confidence 9999999999999999965421 124588999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeecCCccccCCCC-cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccH
Q 004689 547 HMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 624 (736)
Q Consensus 547 ~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l 624 (736)
++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+.... .+
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~----~~ 314 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----EL 314 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GH
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HH
Confidence 99999999999986543322 12233457889999999999999999999999999999999 99999765422 22
Q ss_pred HHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 625 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 625 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
.... ..+... ..+......+.+++..|++.+|.+||++.|+++.|++++...
T Consensus 315 ~~~~----~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 315 FKLL----KEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHH----HTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHH----hcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 2221 112111 111223346889999999999999999999999999987643
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=369.97 Aligned_cols=260 Identities=26% Similarity=0.453 Sum_probs=208.2
Q ss_pred HHHHHHHhhccccccCceEEEEEEEC----CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeE
Q 004689 405 IEDATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 479 (736)
Q Consensus 405 i~~~~~~~~~~IG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 479 (736)
+....+.+.+.||+|+||+||+|.+. .+..||||+++... ......+.+|+.++++++||||+++++++.+.+..
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 33445667789999999999999885 34569999997543 23356789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
++||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 9999999999999998532 34689999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCc--ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 560 FAVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 560 ~~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .+...+ ..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~----~~~~ 271 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR----DVISSV----EEGY 271 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH----HHHHHH----HTTC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH----HHHHHH----HcCC
Confidence 66443222 2223446789999999998999999999999999999999 99999765421 121111 1111
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
....+......+.+++..|++.||++||++.||++.|+.++.
T Consensus 272 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 272 ---------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011112233468899999999999999999999999999864
No 27
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=367.34 Aligned_cols=249 Identities=20% Similarity=0.328 Sum_probs=195.6
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
.|.+.+.||+|+||+||+|++. +|+.||||++..... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus 11 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 90 (347)
T 3zgw_A 11 YYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYC 90 (347)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 3456789999999999999874 789999999876532 33567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 91 ~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 91 PGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp TTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 99999999843 45689999999999999999999998 999999999999999999999999999976544444
Q ss_pred cceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
......+||+.|+|||++.+..+ +.++|||||||++|||++|..||.+.... .+.. . +..+... +
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~----~~~~---~-i~~~~~~------~ 229 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM----ALYK---K-IMRGKYD------V 229 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH---H-HHHTCCC------C
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHHH---H-HHcCCCC------C
Confidence 44455679999999999988775 88999999999999999999999865421 1111 1 1112111 1
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.... ...+.+++.+|++.||++|||+.|++++-
T Consensus 230 p~~~----s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 230 PKWL----SPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred CCCC----CHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 1112 23477899999999999999999998874
No 28
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.8e-40 Score=352.01 Aligned_cols=280 Identities=35% Similarity=0.590 Sum_probs=226.1
Q ss_pred cccCHHHHHHHHHHhh--------ccccccCceEEEEEEECCCcEEEEEEeccCC----cccchhhhhHHHHHhhcCCCc
Q 004689 398 HCFTLSDIEDATKMLE--------KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRN 465 (736)
Q Consensus 398 ~~~~~~~i~~~~~~~~--------~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~----~~~~~~~~~E~~il~~l~Hpn 465 (736)
+.|++.++...+.++. +.||+|+||.||+|.. +++.||||++.... ......+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 5588899998888774 5699999999999987 48999999986532 122456889999999999999
Q ss_pred eeeEeeeeeeCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc
Q 004689 466 LVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 545 (736)
Q Consensus 466 Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~ 545 (736)
|+++++++...+..++||||+++|+|.+++... .....+++..++.++.|++.||.|||+. +|+||||||+||+++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence 999999999999999999999999999998643 2234689999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccH
Q 004689 546 KHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 624 (736)
Q Consensus 546 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l 624 (736)
.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++|||||||++|||++|..||...........+
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 9999999999999865433222 2234569999999998765 5889999999999999999999999876543333333
Q ss_pred HHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 625 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 625 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
...... ....+...+++.+ ..........+.+++..|++.+|.+||++.||+++|+++.
T Consensus 247 ~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 247 KEEIED--EEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHT--TSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHhhh--hhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 221111 1223344444444 2345667778999999999999999999999999999863
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-41 Score=354.50 Aligned_cols=254 Identities=28% Similarity=0.472 Sum_probs=208.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 489 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~g 489 (736)
+.+.+.||+|+||+||+|.+.+++.||+|++.... ...+++.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (269)
T 4hcu_A 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90 (269)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred ceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence 45678999999999999999889999999997543 23567899999999999999999999999999999999999999
Q ss_pred CHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcce
Q 004689 490 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 569 (736)
Q Consensus 490 sL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 569 (736)
+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 91 ~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 91 CLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp BHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred cHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999998542 34588999999999999999999998 999999999999999999999999999986543322223
Q ss_pred ecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCc
Q 004689 570 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 648 (736)
Q Consensus 570 ~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 648 (736)
....||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+. ...
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~----~~~~~----~~~~~--~~~------- 227 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVED----ISTGF--RLY------- 227 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH----HHTTC--CCC-------
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH----HHHHH----HhcCc--cCC-------
Confidence 34457889999999998999999999999999999999 99999765421 11111 11110 001
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 649 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 649 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.+......+.+++..|++.+|++||++.|++++|+++..
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 111123458899999999999999999999999998853
No 30
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.9e-42 Score=356.03 Aligned_cols=255 Identities=29% Similarity=0.468 Sum_probs=209.9
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
.+.+.+.||+|+||.||+|+..++..||+|++..... ....+.+|++++++++||||+++++++.+....++||||+++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (268)
T 3sxs_A 9 EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN 87 (268)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred heeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence 4456789999999999999999888999999975433 356789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 88 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 88 GCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred CcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999998532 34589999999999999999999998 99999999999999999999999999998665544333
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... . ...+.. ...+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~---~-~~~~~~--~~~~---- 227 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS----EVVL---K-VSQGHR--LYRP---- 227 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHH---H-HHTTCC--CCCC----
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH----HHHH---H-HHcCCC--CCCC----
Confidence 344557788999999999899999999999999999999 99999765421 1111 1 111110 0111
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
......+.+++..|++.+|++|||+.|++++|+.+..
T Consensus 228 ---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 228 ---HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp ---TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred ---CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 1112358899999999999999999999999988743
No 31
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5.7e-42 Score=374.09 Aligned_cols=257 Identities=25% Similarity=0.434 Sum_probs=197.3
Q ss_pred HHHhhccccccCceEEEEEEEC----CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
.+.+.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 4456789999999999999875 56789999987543 233567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 126 e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 126 EYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp ECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred eCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999632 34689999999999999999999998 999999999999999999999999999986544
Q ss_pred CCCcc--eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 564 GASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 564 ~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
..... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...+ ..+.
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~----~~~~~i----~~~~---- 267 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV----DEGY---- 267 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH----HHHHHH----HTTE----
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCC----
Confidence 32221 122345788999999999999999999999999999998 99999765421 122211 1110
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
....+......+.+++..|++.||++||++.||++.|+.++..
T Consensus 268 -----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 -----RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -----ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0111222345688999999999999999999999999998653
No 32
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.4e-40 Score=355.67 Aligned_cols=259 Identities=23% Similarity=0.364 Sum_probs=210.8
Q ss_pred ccCHHHHHHHHHH------------hhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCc
Q 004689 399 CFTLSDIEDATKM------------LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN 465 (736)
Q Consensus 399 ~~~~~~i~~~~~~------------~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn 465 (736)
.++..++..++.. ..+.||+|+||.||+|+.. +|+.||||++..........+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4677777776653 2458999999999999987 79999999997666555677899999999999999
Q ss_pred eeeEeeeeeeCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc
Q 004689 466 LVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 545 (736)
Q Consensus 466 Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~ 545 (736)
|+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~ 175 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLT 175 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence 99999999999999999999999999998842 3589999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHH
Q 004689 546 KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 625 (736)
Q Consensus 546 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~ 625 (736)
.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 176 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----~~~ 250 (321)
T 2c30_A 176 LDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----QAM 250 (321)
T ss_dssp TTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHH
T ss_pred CCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHH
Confidence 999999999999976543322 223456999999999999999999999999999999999999999755421 111
Q ss_pred HHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 626 QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 626 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... ..... +.+.. .......+.+++.+|++.||++|||+.|++++
T Consensus 251 ~~~----~~~~~-----~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 251 KRL----RDSPP-----PKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHH----HHSSC-----CCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHH----hcCCC-----CCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 11111 11110 11122457889999999999999999999875
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-41 Score=354.29 Aligned_cols=256 Identities=29% Similarity=0.469 Sum_probs=207.2
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
.+.+.+.||+|+||+||+|.+.++..||||++..... ...++.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 103 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 103 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTT
T ss_pred HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCC
Confidence 4556789999999999999999888999999975432 356789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 104 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 104 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred CcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999642 35689999999999999999999998 99999999999999999999999999998654332222
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .... .+..+. ..
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~----~~~~----~~~~~~---------~~ 240 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS----ETAE----HIAQGL---------RL 240 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHH----HHHTTC---------CC
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh----HHHH----HHhccc---------CC
Confidence 233457889999999998899999999999999999998 99999765421 1111 111111 00
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
..+......+.+++..|++.+|.+|||+.|++++|++++..
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 241 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 01111124588999999999999999999999999998653
No 34
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.5e-41 Score=371.48 Aligned_cols=255 Identities=29% Similarity=0.431 Sum_probs=207.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
+.+.+.||+|+||.||+|++. +++.||||+++.... .....+.+|+++|++++||||+++++++...+..++||||++
T Consensus 116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 195 (377)
T 3cbl_A 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 195 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCC
Confidence 446789999999999999987 789999999875432 234578999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
+|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 196 ~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 196 GGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp TCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 9999999963 234689999999999999999999998 9999999999999999999999999999754332111
Q ss_pred ce-ecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 568 VS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 568 ~~-~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
.. ....+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.. .+..+...
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----~~~~----~~~~~~~~------- 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----QTRE----FVEKGGRL------- 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----HHHH----HHHTTCCC-------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH----HHHcCCCC-------
Confidence 11 12235788999999998899999999999999999998 99999765421 1111 12222110
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
..+......+.+++.+|++.||++|||+.+|++.|+++..
T Consensus 335 --~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 --PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1111223468899999999999999999999999998754
No 35
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.3e-41 Score=361.41 Aligned_cols=245 Identities=24% Similarity=0.413 Sum_probs=201.8
Q ss_pred HHhhccccccCceEEEEEEE-CCCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
|.+.+.||+|+||.||+|++ .+|+.||||++.... ......+.+|+++|+.++||||+++++++...+..++||||+
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 96 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence 45678999999999999988 479999999986542 223456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 97 SGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp TTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 99999999853 35688999999999999999999998 99999999999999999999999999997654332
Q ss_pred cceecccccccccCccccccCcCC-CcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
.....+||+.|+|||++.+..+. .++||||+||++|||++|+.||.+.... .+.. .+..+... +
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~----~i~~~~~~------~ 233 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK----ELRE----RVLRGKYR------I 233 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCC------C
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH----HHHH----HHHhCCCC------C
Confidence 23446799999999999988765 7899999999999999999999865421 1111 11112111 1
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+......+.+++.+|++.||.+|||++|++++
T Consensus 234 ----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 ----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11122357889999999999999999999876
No 36
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.4e-41 Score=359.67 Aligned_cols=267 Identities=27% Similarity=0.357 Sum_probs=205.8
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCC----eEEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYE 484 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----~~~lV~e 484 (736)
.+.+.++||+|+||+||+|++. ++.||||++.... .....+..|+.++++++||||+++++++.... ..++|||
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 3456789999999999999987 8999999986443 22345667999999999999999999998754 4699999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCC-------CCceecCCCCCCCEEEcCCCcEEEEeecC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-------VPAIIHRDLKSSNILLDKHMRAKVSDFGL 557 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~-------~~~iiHrDikp~NILl~~~~~~kl~DFGl 557 (736)
|+++|+|.+++.. ..+++..++.++.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 103 FHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999999953 34899999999999999999999851 23899999999999999999999999999
Q ss_pred CccccCCCCc-ceecccccccccCcccccc-----CcCCCcchhHHHHHHHHHHHhCCCcCccccccccc---------c
Q 004689 558 SKFAVDGASH-VSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANC---------R 622 (736)
Q Consensus 558 a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~-----~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~---------~ 622 (736)
++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....... .
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9765443322 2233569999999999986 35667889999999999999999999764321111 0
Q ss_pred cHHHHHHHhhhcCCcceeccCccCCcC-CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 623 NIVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 623 ~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
....+...... .. ..+.+.... .......+.+++.+|++.||++|||+.||++.|+++..
T Consensus 258 ~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 258 SLEDMQEVVVH-KK----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CHHHHHHHHTT-SC----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chhhhhhhhhc-cc----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11122111111 11 111111111 23455679999999999999999999999999998754
No 37
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.6e-40 Score=348.99 Aligned_cols=272 Identities=21% Similarity=0.289 Sum_probs=212.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCC--eEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~lV~e~ 485 (736)
|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 456789999999999999887 589999999975432 33456789999999999999999999987655 78999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE----cCCCcEEEEeecCCccc
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl----~~~~~~kl~DFGla~~~ 561 (736)
+++|+|.+++.... ....+++..++.++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 ~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 91 CPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999996432 223389999999999999999999998 99999999999999 78888999999999865
Q ss_pred cCCCCcceecccccccccCccccc--------cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhh
Q 004689 562 VDGASHVSSIVRGTVGYLDPEYYI--------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 633 (736)
Q Consensus 562 ~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 633 (736)
..... .....||+.|+|||++. +..++.++|||||||++|||++|+.||...........+.........
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 44332 23356999999999986 467899999999999999999999999755433332233222222111
Q ss_pred cCCcceec---------cCcc--CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 634 SGDIQGII---------DPSL--LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 634 ~~~~~~~~---------d~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
...+..+. .+.+ ...........+.+++..|++.||++|||++|++++..+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 11111110 0111 113345667788999999999999999999999999987643
No 38
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.4e-41 Score=358.39 Aligned_cols=265 Identities=27% Similarity=0.396 Sum_probs=205.3
Q ss_pred HHHHhhccccccCceEEEEEEE-----CCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeee--CCeEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSV 480 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~~ 480 (736)
..+.+.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 3456778999999999999985 2688999999986655556779999999999999999999999854 45689
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 90 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 999999999999999643 34589999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC--cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccc--------cccccHHHHHHH
Q 004689 561 AVDGAS--HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG--------ANCRNIVQWAKL 630 (736)
Q Consensus 561 ~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~--------~~~~~l~~~~~~ 630 (736)
...... .......||..|+|||.+.+..++.++|||||||++|||++|..|+...... ............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 543322 1223345788899999999999999999999999999999999998643210 000111111122
Q ss_pred hhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 631 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 631 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
....+.. ...+......+.+++..|++.||++|||+.||++.|+++..
T Consensus 244 ~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 244 LLKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhccCc---------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 2221111 11122233568899999999999999999999999998753
No 39
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-40 Score=361.64 Aligned_cols=249 Identities=24% Similarity=0.363 Sum_probs=202.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc------cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 482 (736)
|.+.+.||+|+||+||+|+.. +|+.||+|++...... ....+.+|+.+|++++||||+++++++.+....++|
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 93 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence 456789999999999999886 6899999999765322 235688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC----cEEEEeecCC
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFGLS 558 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~----~~kl~DFGla 558 (736)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 94 ~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 94 LELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999843 45689999999999999999999998 999999999999998877 7999999999
Q ss_pred ccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 559 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 559 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....+ +.. .+..+...
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~----~~~----~i~~~~~~ 236 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA----NITAVSYD 236 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHH----HHHTTCCC
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----HHH----HHHhcCCC
Confidence 8654432 2234569999999999999999999999999999999999999997654211 111 11111110
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+++...... ...+.+++..|+..||.+|||+.|++++
T Consensus 237 --~~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 237 --FDEEFFSQT----SELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp --CCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --CCchhccCC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111111111 2357899999999999999999999875
No 40
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.7e-41 Score=352.28 Aligned_cols=258 Identities=24% Similarity=0.382 Sum_probs=202.6
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc---cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
.|.+.+.||+|+||.||+|+.. +++.||+|++...... ....+.+|+.++++++||||+++++++...+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 91 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME 91 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence 4556789999999999999875 6889999998654322 23568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 92 YIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp CCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred CCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999843 34689999999999999999999998 9999999999999999999999999999866544
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.........||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.... .......... ... ...
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~-~~~-~~~- 234 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDS-VPN-VTT- 234 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHSSC-CCC-HHH-
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhhcc-CCC-cch-
Confidence 333344567999999999999999999999999999999999999999765421 1111111111 110 001
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAI 686 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~ev~~~L~~~~ 686 (736)
.........+.+++.+|++.||++|| ++.++.+.|+.++
T Consensus 235 ---~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 235 ---DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp ---HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred ---hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 11122234688999999999999999 8999999888664
No 41
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.3e-40 Score=356.04 Aligned_cols=246 Identities=23% Similarity=0.306 Sum_probs=201.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||+||+|+.. +++.||+|+++... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~ 86 (337)
T 1o6l_A 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86 (337)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeC
Confidence 345689999999999999876 68999999997542 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 87 ANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp CTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999998843 45688999999999999999999998 99999999999999999999999999997533222
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... . ..+.+ .+
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~---i-~~~~~------~~ 224 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFEL---I-LMEEI------RF 224 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH---H-HHCCC------CC
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH----HHHHH---H-HcCCC------CC
Confidence 2234567999999999999999999999999999999999999999765421 11111 1 11111 11
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 681 (736)
+......+.+++.+|++.||++|| +++||+++
T Consensus 225 ----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 ----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 111224578999999999999999 89999876
No 42
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=354.73 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=203.3
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc------cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
..|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.++++++||||+++++++......+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45667889999999999999886 6899999998754322 2456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC----cEEEEeec
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 556 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~----~~kl~DFG 556 (736)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999843 35689999999999999999999998 999999999999999887 89999999
Q ss_pred CCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 557 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 557 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||......+ ...... ...
T Consensus 164 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~~~----~~~ 233 (326)
T 2y0a_A 164 LAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVS----AVN 233 (326)
T ss_dssp TCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHH----HTC
T ss_pred CCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HHHHHH----hcC
Confidence 998654322 2234569999999999998999999999999999999999999997654211 111111 111
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. +...... .....+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~--~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 YE--FEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CC--CCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CC--cCccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 0000001 112357899999999999999999999986
No 43
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-40 Score=354.61 Aligned_cols=259 Identities=27% Similarity=0.434 Sum_probs=209.4
Q ss_pred HHHhhccccccCceEEEEEEE------CCCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 481 (736)
.+.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 103 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLL 103 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEE
Confidence 355678999999999999986 245789999987543 2334678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhcccc--------------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCC
Q 004689 482 VYEFMHNGTLKEHLYGTLT--------------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 541 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~N 541 (736)
||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~N 180 (314)
T 2ivs_A 104 IVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARN 180 (314)
T ss_dssp EEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred EEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchhe
Confidence 9999999999999965432 124588999999999999999999998 99999999999
Q ss_pred EEEcCCCcEEEEeecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCccccccc
Q 004689 542 ILLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGA 619 (736)
Q Consensus 542 ILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~ 619 (736)
||++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 259 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE- 259 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 99999999999999999865443322 2233457889999999999899999999999999999999 99999765421
Q ss_pred ccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 620 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 620 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.+..... .+... ..+......+.+++.+|++.||++||++.||+++|++++.
T Consensus 260 ---~~~~~~~----~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 260 ---RLFNLLK----TGHRM---------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp ---GHHHHHH----TTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHhh----cCCcC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 2222211 11111 1111223458899999999999999999999999999865
No 44
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.8e-40 Score=348.12 Aligned_cols=258 Identities=22% Similarity=0.366 Sum_probs=199.2
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhh--cCCCceeeEeeeeee----CCeEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQE----EGRSVLV 482 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~--l~HpnIv~l~~~~~~----~~~~~lV 482 (736)
.+.+.+.||+|+||+||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++.. ....++|
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 345678999999999999998 4899999998643 23455667777766 799999999998754 3457999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSD 554 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH--------~~~~~~iiHrDikp~NILl~~~~~~kl~D 554 (736)
|||+++|+|.+++. ...+++..++.++.|++.||.||| +. +|+||||||+|||++.++.+||+|
T Consensus 85 ~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 85 THYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp ECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECC
T ss_pred hhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEee
Confidence 99999999999994 346899999999999999999999 66 999999999999999999999999
Q ss_pred ecCCccccCCCCcc---eecccccccccCccccccC------cCCCcchhHHHHHHHHHHHhC----------CCcCccc
Q 004689 555 FGLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNE 615 (736)
Q Consensus 555 FGla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~~~~~DVwSlGvvl~elltG----------~~p~~~~ 615 (736)
||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99997654433322 2234699999999999876 456799999999999999999 7777654
Q ss_pred ccccccccHHHHHHHhhhcCCcceeccCccCC-cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 004689 616 KFGANCRNIVQWAKLHIESGDIQGIIDPSLLD-EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 685 (736)
Q Consensus 616 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 685 (736)
..... .............. .+.+.. ..+......+.+++.+|++.||++|||+.||++.|+++
T Consensus 237 ~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPNDP--SFEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSSC--CHHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCc--chhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 32211 11111111111111 111111 12334667899999999999999999999999999875
No 45
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=364.53 Aligned_cols=262 Identities=24% Similarity=0.433 Sum_probs=211.3
Q ss_pred HHHHhhccccccCceEEEEEEEC--------CCcEEEEEEeccCCc-ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCC
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 477 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 477 (736)
..+.+.+.||+|+||+||+|+.. .+..||||+++.... .....+.+|+++++++ +||||+++++++...+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 35567789999999999999863 235799999976532 2346788999999999 9999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhcccc------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc
Q 004689 478 RSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 545 (736)
Q Consensus 478 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~ 545 (736)
..++||||+++|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+|||++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEc
Confidence 99999999999999999965431 124589999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeecCCccccCCCC-cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCccccccccccc
Q 004689 546 KHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRN 623 (736)
Q Consensus 546 ~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~ 623 (736)
.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~----~ 301 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----E 301 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----H
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----H
Confidence 999999999999986543322 22333457899999999999999999999999999999999 99999765421 2
Q ss_pred HHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 624 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 624 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
+... +..+... ..+......+.+++..|++.||++||++.||+++|++++...
T Consensus 302 ~~~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 302 LFKL----LKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHH----HHTTCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHH----HHcCCCC---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 2221 1122111 111122345889999999999999999999999999987543
No 46
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.1e-40 Score=356.54 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=204.8
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC-----cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-----~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
...|.+.+.||+|+||+||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 446777899999999999999876 68999999986431 123567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEeecC
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGL 557 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~---~kl~DFGl 557 (736)
+||||+++|+|.+.+.........+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988865433344588999999999999999999998 9999999999999987654 99999999
Q ss_pred CccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCc
Q 004689 558 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 637 (736)
Q Consensus 558 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 637 (736)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+... .+... +..+..
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~----i~~~~~ 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEG----IIKGKY 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-----HHHHH----HHHTCC
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-----HHHHH----HHcCCC
Confidence 98654432 223345699999999999999999999999999999999999999976431 11111 111111
Q ss_pred ceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 638 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 638 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
. .++...... ...+.+++.+|++.||++|||+.|++++
T Consensus 250 ~--~~~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 K--MNPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp C--CCHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--CCccccccC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 011101111 2458899999999999999999999875
No 47
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.4e-41 Score=375.09 Aligned_cols=254 Identities=23% Similarity=0.395 Sum_probs=207.0
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
.+.+.+.||+|+||+||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++. .+..++||||+.+
T Consensus 189 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~ 266 (454)
T 1qcf_A 189 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAK 266 (454)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTT
T ss_pred HeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCC
Confidence 345678999999999999999888999999997543 34677999999999999999999999987 5678999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 267 g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 267 GSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp CBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred CcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 9999999642 234578889999999999999999998 99999999999999999999999999998654322222
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....+|+.|+|||++....++.++|||||||++|||++ |+.||.+.... .+...+. .+...
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i~----~~~~~--------- 404 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRALE----RGYRM--------- 404 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHH----HTCCC---------
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH----cCCCC---------
Confidence 233446889999999998999999999999999999999 99999865422 1222111 11100
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
..+......+.+++.+|++.||++|||+++|++.|+++.
T Consensus 405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 011122346889999999999999999999999998763
No 48
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.5e-40 Score=352.11 Aligned_cols=260 Identities=21% Similarity=0.282 Sum_probs=198.4
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcc--cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
|.+.+.||+|+||+||+|+..+++.||+|++...... ....+.+|++++++++||||+++++++.++...++||||++
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 102 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC
Confidence 4567899999999999999988999999998754322 23568899999999999999999999999999999999998
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
+ +|.+.+... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 103 ~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 103 K-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp E-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred C-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 5 788877532 34588999999999999999999998 999999999999999999999999999986543322
Q ss_pred ceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc---e----
Q 004689 568 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ---G---- 639 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~---~---- 639 (736)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.. ........ .
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS----ILGTPNPREWPQVQEL 250 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHH----HHCCCCTTTSGGGTTS
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH----HHCCCChHHhhhhhcc
Confidence 2233468999999999876 5689999999999999999999999986553322222211 11111000 0
Q ss_pred ---------eccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 640 ---------IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 640 ---------~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..+.............++.+++.+|++.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000001122457899999999999999999999874
No 49
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.6e-40 Score=352.90 Aligned_cols=260 Identities=18% Similarity=0.223 Sum_probs=207.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
+.+.+.||+|+||+||+|+.. +++.||||++.... ....+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 445789999999999999874 78999999986543 245688999999999 9999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc-----EEEEeecCCcccc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFAV 562 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~-----~kl~DFGla~~~~ 562 (736)
+++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 88 ~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 88 GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999998643 35689999999999999999999998 9999999999999998887 9999999998654
Q ss_pred CCCCc------ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 563 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 563 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.........+......... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-~~ 240 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA-TP 240 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH-SC
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc-CC
Confidence 43221 123467999999999999999999999999999999999999999875422211111111111110 00
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
. + .+... .. ++.+++..|++.+|.+||++.+|.+.|+++....
T Consensus 241 ~-~----~~~~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 241 I-E----VLCEN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp H-H----HHTTT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred H-H----HHhcc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0 0 00001 12 6889999999999999999999999999876543
No 50
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.4e-40 Score=348.28 Aligned_cols=258 Identities=21% Similarity=0.334 Sum_probs=196.2
Q ss_pred HHHHhhccccccCceEEEEEEECC----CcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 482 (736)
..+.+.+.||+|+||.||+|.+.. +..||+|++..... .....+.+|+.++++++||||+++++++. ++..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 345567899999999999998753 45699999875432 23456889999999999999999999985 4567899
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
|||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 94 MELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence 9999999999998532 34588999999999999999999998 99999999999999999999999999998665
Q ss_pred CCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceec
Q 004689 563 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 641 (736)
Q Consensus 563 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 641 (736)
...........+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .+...+. .+...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~~~i~----~~~~~--- 236 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIE----NGERL--- 236 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH----TTCCC---
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHHHHHH----cCCCC---
Confidence 443333344457889999999998899999999999999999997 99999765422 2222211 11111
Q ss_pred cCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 642 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 642 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
..+......+.+++.+|++.||++||++.|++++|++++..+
T Consensus 237 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 ------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 011122345889999999999999999999999999987654
No 51
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.9e-41 Score=363.25 Aligned_cols=261 Identities=27% Similarity=0.425 Sum_probs=206.8
Q ss_pred HHHHhhccccccCceEEEEEEEC------CCcEEEEEEeccCCc-ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCC-e
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG-R 478 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~-~ 478 (736)
..+.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+ .
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 34556889999999999999742 467899999975432 2345689999999999 7999999999998755 4
Q ss_pred EEEEEEecCCCCHHHHhhccccc---------------------------------------------------------
Q 004689 479 SVLVYEFMHNGTLKEHLYGTLTH--------------------------------------------------------- 501 (736)
Q Consensus 479 ~~lV~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 501 (736)
.++||||+++|+|.+++......
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 89999999999999999754321
Q ss_pred -----ccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC-cceeccccc
Q 004689 502 -----EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGT 575 (736)
Q Consensus 502 -----~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt 575 (736)
...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....... .......||
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 258 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence 11288999999999999999999998 999999999999999999999999999986543322 233445689
Q ss_pred ccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHH
Q 004689 576 VGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSM 654 (736)
Q Consensus 576 ~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 654 (736)
+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .+.. .+..+... ..... ..
T Consensus 259 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~----~~~~~~~~-----~~~~~----~~ 322 (359)
T 3vhe_A 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFCR----RLKEGTRM-----RAPDY----TT 322 (359)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---HHHH----HHHHTCCC-----CCCTT----CC
T ss_pred ceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH---HHHH----HHHcCCCC-----CCCCC----CC
Confidence 99999999999999999999999999999998 999997654221 1111 11111111 11111 22
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 655 WKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 655 ~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
..+.+++..|++.||.+|||+.||+++|++++.
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 358899999999999999999999999999865
No 52
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-41 Score=364.63 Aligned_cols=262 Identities=26% Similarity=0.400 Sum_probs=208.2
Q ss_pred HHHHhhccccccCceEEEEEEEC------CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
..+.+.+.||+|+||+||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 34556789999999999999853 46789999986542 334557889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhccc---ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC---cEEEEe
Q 004689 481 LVYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSD 554 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~---~~kl~D 554 (736)
+||||+++|+|.+++.... .....+++..++.++.|++.||.|||++ +|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999996543 1224589999999999999999999998 999999999999999554 599999
Q ss_pred ecCCccccCC-CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhh
Q 004689 555 FGLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 555 FGla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
||+++..... .........||+.|+|||++.+..++.++|||||||++|||++ |..||...... .+... +
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~----~~~~~----i 299 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEF----V 299 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHH----H
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----H
Confidence 9999754222 1222334568999999999999999999999999999999998 99999765421 12221 1
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
..+... ..+......+.+++.+|++.+|++||++.||+++|+.+....
T Consensus 300 ~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 300 TSGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HcCCCC---------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 111110 111122345889999999999999999999999999886543
No 53
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-40 Score=377.78 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=209.5
Q ss_pred HHhhccccccCceEEEEEEECC-CcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
+.+.+.||+|+||.||+|.+.. +..||||+++... .....|.+|+.+|++++||||++++++|......++||||+++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~ 300 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence 4567899999999999999874 7899999987543 3356799999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 301 g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 301 GNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp CBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 9999999643 234588999999999999999999998 99999999999999999999999999998764433333
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....+|+.|+|||++....++.++|||||||++|||++ |..||.+.... .+.+.+. .+. ..
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~~~----~~~---------~~ 438 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELLE----KDY---------RM 438 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHH----TTC---------CC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH----cCC---------CC
Confidence 333456789999999999999999999999999999999 99999865522 2222211 111 11
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
..+......+.+++.+|++.||++|||+.||++.|+.+.
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 112223346889999999999999999999999998763
No 54
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.4e-40 Score=354.76 Aligned_cols=255 Identities=23% Similarity=0.375 Sum_probs=199.1
Q ss_pred HHHhhccccccCceEEEEEEEC-CCc----EEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~----~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 482 (736)
.+.+.+.||+|+||+||+|++. +++ .||+|.+.... ......+.+|+.++++++||||++++++|.... .++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v 94 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI 94 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEE
Confidence 3456789999999999999865 344 35888875432 234567899999999999999999999998765 7899
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
+||+.+|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 95 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 95 TQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 9999999999999643 35688999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 563 DGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 563 ~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
..... ......||+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+..... .+..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~----~~~~--- 237 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILE----KGER--- 237 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH----TTCC---
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH----HHHHHHH----cCCC---
Confidence 33322 2233457889999999999999999999999999999999 99999765422 2222211 1110
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
...+......+.+++.+|++.+|.+||++.||+++|+.+..
T Consensus 238 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 ------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 01112233468899999999999999999999999998754
No 55
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-40 Score=348.71 Aligned_cols=259 Identities=27% Similarity=0.408 Sum_probs=213.2
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
..+.+.+.||+|+||+||+|.+. ++..||+|++.... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 34556789999999999999987 47889999987543 33567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++|+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 92 ~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 92 TYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp TTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred CCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 999999999643 234588999999999999999999998 999999999999999999999999999987655444
Q ss_pred cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
.......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .+....... .
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----~~~~~~~~~----~--------- 229 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELLEKD----Y--------- 229 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHHTT----C---------
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHhcc----C---------
Confidence 44444567889999999998999999999999999999999 99999765422 222221111 0
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
....+......+.+++..|++.||.+||++.|+++.|+.+....
T Consensus 230 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 01111122346889999999999999999999999999887643
No 56
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7.3e-41 Score=358.56 Aligned_cols=266 Identities=24% Similarity=0.349 Sum_probs=208.8
Q ss_pred HHHhhccccccCceEEEEEEE-----CCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeee--eCCeEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--~~~~~~l 481 (736)
.+.+.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 455678999999999999984 368899999998765555677999999999999999999999886 4567899
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 104 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999998532 34589999999999999999999998 9999999999999999999999999999866
Q ss_pred cCCCCc--ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccccccc-------ccccHHHHHHHhh
Q 004689 562 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA-------NCRNIVQWAKLHI 632 (736)
Q Consensus 562 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~-------~~~~l~~~~~~~~ 632 (736)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 443322 2233458889999999999899999999999999999999999986543110 0000111111111
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
..+ .....+......+.+++.+|++.||++|||+.|++++|+.+....
T Consensus 258 ~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 258 EEG---------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred hcc---------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 111 111122233456889999999999999999999999999886543
No 57
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=360.20 Aligned_cols=246 Identities=25% Similarity=0.352 Sum_probs=197.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.+.||+|+||+||+|+.. +++.||||+++... ......+.+|..+++.+ +||||+++++++.+.+..++|||
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E 104 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVME 104 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEe
Confidence 456789999999999999876 58999999997542 22345577899999988 79999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++.....
T Consensus 105 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 105 FVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 9999999999853 45689999999999999999999998 9999999999999999999999999999753322
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +... +..+..
T Consensus 178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~~----i~~~~~------- 241 (353)
T 3txo_A 178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD----LFEA----ILNDEV------- 241 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHCCC-------
T ss_pred -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH----HHHH----HHcCCC-------
Confidence 223345679999999999999999999999999999999999999998655221 1111 111111
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~ev~~~ 681 (736)
.++......+.+++..|++.||++||++ .||++|
T Consensus 242 ---~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 242 ---VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred ---CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 1111122357889999999999999998 777765
No 58
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.6e-40 Score=346.64 Aligned_cols=264 Identities=21% Similarity=0.290 Sum_probs=197.5
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
|.+.+.||+|+||+||+|+..+++.||+|++..... .....+.+|++++++++||||+++++++...+..++||||+.
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 345688999999999999998899999999865432 224568899999999999999999999999999999999998
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
+ +|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (288)
T 1ob3_A 84 Q-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR- 155 (288)
T ss_dssp E-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred C-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-
Confidence 5 898888532 35688899999999999999999998 999999999999999999999999999976533221
Q ss_pred ceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcC--Ccc--eecc
Q 004689 568 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG--DIQ--GIID 642 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~--~~~--~~~d 642 (736)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+........... ... ..++
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 2233468999999999976 4589999999999999999999999976542211111111100000000 000 0011
Q ss_pred CccC-------CcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 643 PSLL-------DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 643 ~~l~-------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+... ..........+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1110 01111223457899999999999999999999865
No 59
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-40 Score=352.80 Aligned_cols=250 Identities=18% Similarity=0.298 Sum_probs=202.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
|.+.+.||+|+||+||+|... +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 85 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG 85 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCC
Confidence 456788999999999999876 57899999986443 3345688999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--CCcEEEEeecCCccccCCCC
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~--~~~~kl~DFGla~~~~~~~~ 566 (736)
|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 86 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 86 LDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999998532 34689999999999999999999998 9999999999999997 7899999999998664432
Q ss_pred cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccC
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 646 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 646 (736)
......||+.|+|||++.+..++.++|||||||++|||++|..||...... .+...+. .+... .+....
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~----~~~~~--~~~~~~ 227 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ----QIIENIM----NAEYT--FDEEAF 227 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHH----HTCCC--CCHHHH
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH----HHHHHHH----cCCCC--CChhhh
Confidence 233456999999999999888999999999999999999999999765421 1111111 11110 000001
Q ss_pred CcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 647 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 647 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.. ....+.+++.+|+..||.+|||+.|++++-
T Consensus 228 ~~----~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 228 KE----ISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp TT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred cc----CCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 11 124588999999999999999999999864
No 60
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=357.31 Aligned_cols=254 Identities=22% Similarity=0.291 Sum_probs=200.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.++||+|+||+||+|+.. +++.||||+++.... .....+..|..++.++ +||||+++++++.+.+..++|||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E 133 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence 456789999999999999987 578899999976432 2345578899999887 89999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 ~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 134 YVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999999853 45689999999999999999999998 9999999999999999999999999999853222
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccc-cccHHHHHHHhhhcCCcceeccC
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN-CRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ...........+..+.+
T Consensus 207 -~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp -TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred -CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 2234456799999999999999999999999999999999999999975432111 11112222222222221
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 681 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~ev~~~ 681 (736)
. ++......+.+++.+|++.||++||++ .||+++
T Consensus 280 ~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 280 R----IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp C----CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred C----CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 1 111123457899999999999999985 566655
No 61
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.3e-40 Score=354.31 Aligned_cols=250 Identities=22% Similarity=0.356 Sum_probs=199.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|+.+++.++||||+++++++.+++..++||||++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 88 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence 446789999999999999876 789999999865432 234678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC-C
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-S 566 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~-~ 566 (736)
+|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 89 ~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 89 GGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999884 345689999999999999999999998 99999999999999999999999999997653222 2
Q ss_pred cceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ......|... ... ..
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~----~~~---~~--- 229 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWKEK----KTY---LN--- 229 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT--SHHHHHHHTT----CTT---ST---
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHHhcc----ccc---CC---
Confidence 22334579999999999987765 77899999999999999999999765421 1112222111 000 00
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
........+.+++.+|++.||++|||+.|++++
T Consensus 230 ---~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 ---PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 001123457889999999999999999999876
No 62
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.7e-40 Score=352.94 Aligned_cols=254 Identities=23% Similarity=0.398 Sum_probs=200.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcE----EEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKE----IAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~----vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
+.+.+.||+|+||+||+|.+. +++. ||+|++.... ......+.+|+.++++++||||+++++++. .+..++||
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~ 93 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVT 93 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEE
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEE
Confidence 445789999999999999875 3443 7888875443 334567889999999999999999999986 45689999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
||+.+|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 94 QYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp ECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999998643 35688889999999999999999998 999999999999999999999999999987644
Q ss_pred CCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceec
Q 004689 564 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 641 (736)
Q Consensus 564 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 641 (736)
.... ......||..|+|||++.+..++.++|||||||++|||++ |+.||...... .+.... ..+....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~----~~~~~~~-- 237 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPDLL----EKGERLA-- 237 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHHHH----HTTCBCC--
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHHHH----HcCCCCC--
Confidence 3322 2344568889999999999999999999999999999999 99999865422 222211 1111100
Q ss_pred cCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 642 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 642 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.+......+.+++.+|++.||.+||++.|++++|+.+..
T Consensus 238 -------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 238 -------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 011112247789999999999999999999999998754
No 63
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.9e-40 Score=365.06 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=202.5
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
..|.+.+.||+|+||+||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 45667889999999999999875 689999999875432 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc---CCCcEEEEeecCCccc
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFA 561 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~---~~~~~kl~DFGla~~~ 561 (736)
|+.+|+|.+.+.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++..
T Consensus 91 ~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 91 LVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred eCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999998853 35689999999999999999999998 999999999999998 4578999999999765
Q ss_pred cCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceec
Q 004689 562 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 641 (736)
Q Consensus 562 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 641 (736)
..... ......||+.|+|||++.+..++.++||||+||++|||++|..||.+.... .+... +..+... +
T Consensus 164 ~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~----~~~~~----i~~~~~~--~ 232 (444)
T 3soa_A 164 EGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH----RLYQQ----IKAGAYD--F 232 (444)
T ss_dssp CTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHH----HHHTCCC--C
T ss_pred cCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH----HHHHH----HHhCCCC--C
Confidence 44322 223457999999999999999999999999999999999999999765421 12111 1122111 0
Q ss_pred cCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 642 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 642 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
....... ....+.+++..|++.||++|||+.|++++
T Consensus 233 ~~~~~~~----~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSPEWDT----VTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTTTTTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred Ccccccc----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0111111 22458899999999999999999999886
No 64
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6.4e-40 Score=366.96 Aligned_cols=249 Identities=28% Similarity=0.428 Sum_probs=203.4
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCC-eEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-RSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-~~~lV~e~~~~ 488 (736)
+.+.+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.+|++++||||+++++++.... ..++||||+++
T Consensus 195 ~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~ 271 (450)
T 1k9a_A 195 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 271 (450)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred eEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCC
Confidence 345789999999999999987 7899999997543 4567999999999999999999999987665 78999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 272 g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 342 (450)
T 1k9a_A 272 GSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 342 (450)
T ss_dssp CBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----
Confidence 9999999643 123478889999999999999999998 9999999999999999999999999999754221
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...+ ..+.. .
T Consensus 343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i----~~~~~---------~ 405 (450)
T 1k9a_A 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPRV----EKGYK---------M 405 (450)
T ss_dssp ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT----THHHHH----HTTCC---------C
T ss_pred ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCCC---------C
Confidence 122357899999999999999999999999999999998 99999866532 222211 12211 0
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
..+......+.+++..|++.||++|||+.||++.|+.+..
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1112233468899999999999999999999999998754
No 65
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.1e-40 Score=365.21 Aligned_cols=249 Identities=22% Similarity=0.270 Sum_probs=201.9
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
.+.+.||+|+||+||+|+.. +++.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 72 ~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~ 151 (410)
T 3v8s_A 72 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYM 151 (410)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 34678999999999999987 58899999986532 223456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++++||+|||+++.......
T Consensus 152 ~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 152 PGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999998853 3588889999999999999999998 999999999999999999999999999986654443
Q ss_pred cceecccccccccCccccccCc----CCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQ----LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~----~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+....+..+.... ...
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----~~p---- 295 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL----TFP---- 295 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC----CCC----
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccc----cCC----
Confidence 3444667999999999998655 8899999999999999999999998665332222222211110 000
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 681 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~ 681 (736)
. ... ....+.+++.+|+..+|.+ ||+++||++|
T Consensus 296 -~-~~~----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 296 -D-DND----ISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -T-TCC----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -C-ccc----ccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0 011 1235788999999999988 9999999887
No 66
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-40 Score=354.63 Aligned_cols=263 Identities=25% Similarity=0.384 Sum_probs=207.0
Q ss_pred HHHHhhccccccCceEEEEEEE------CCCcEEEEEEeccCC-cccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 479 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 479 (736)
..+.+.+.||+|+||.||+|.+ .++..||||++.... ......+.+|+.+++++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 4455678999999999999986 245689999997543 23456789999999999 899999999999999999
Q ss_pred EEEEEecCCCCHHHHhhccccc-------------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCC
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTH-------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 540 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~ 540 (736)
++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~ 201 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAAR 201 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGG
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChh
Confidence 9999999999999999654211 13478999999999999999999998 9999999999
Q ss_pred CEEEcCCCcEEEEeecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccc
Q 004689 541 NILLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFG 618 (736)
Q Consensus 541 NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~ 618 (736)
|||++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 999999999999999999865443322 2334567899999999999999999999999999999998 99999765422
Q ss_pred cccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 619 ANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 619 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
. .+... ...+.. ...+......+.+++..|++.||.+||++.||+++|+.++...
T Consensus 282 ~---~~~~~----~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 282 A---NFYKL----IQNGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp H---HHHHH----HHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred H---HHHHH----HhcCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 1 11111 111110 0111122346889999999999999999999999999886543
No 67
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-40 Score=343.88 Aligned_cols=254 Identities=28% Similarity=0.454 Sum_probs=207.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 489 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~g 489 (736)
+.+.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence 446788999999999999998889999999975543 3467899999999999999999999999999999999999999
Q ss_pred CHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcce
Q 004689 490 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 569 (736)
Q Consensus 490 sL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 569 (736)
+|.+++... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..........
T Consensus 89 ~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 89 CLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp BHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred cHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999998542 34588999999999999999999998 999999999999999999999999999976543222222
Q ss_pred ecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCc
Q 004689 570 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 648 (736)
Q Consensus 570 ~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 648 (736)
....||+.|+|||++.+..++.++||||||+++|||++ |+.||...... .+... +..+.. ..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~----i~~~~~-----~~---- 225 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVED----ISTGFR-----LY---- 225 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH----HHTTCC-----CC----
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH----HHHHH----HhcCCc-----CC----
Confidence 33457889999999998899999999999999999999 89999765421 11111 111110 00
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 649 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 649 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.+......+.+++.+|++.+|++||++.|++++|+++..
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011123458899999999999999999999999998853
No 68
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.8e-40 Score=356.19 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=203.4
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
...|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 345667889999999999999876 689999999975432 23456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC---CcEEEEeecCCcc
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKF 560 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~---~~~kl~DFGla~~ 560 (736)
||+.+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 108 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999998853 34688999999999999999999998 99999999999999865 4599999999986
Q ss_pred ccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
..... ......||+.|+|||++.+..++.++|||||||++|||++|..||...... .+... +..+...
T Consensus 181 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~----~~~~~----i~~~~~~-- 248 (362)
T 2bdw_A 181 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQ----IKAGAYD-- 248 (362)
T ss_dssp CTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCC--
T ss_pred ecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHH----HHhCCCC--
Confidence 54332 223456999999999999989999999999999999999999999765421 12221 1112111
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+...... .....+.+++.+|++.||++||++.|++++
T Consensus 249 ~~~~~~~----~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 YPSPEWD----TVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CCTTGGG----GSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCccccc----CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000011 123457899999999999999999999875
No 69
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.9e-40 Score=365.90 Aligned_cols=252 Identities=23% Similarity=0.301 Sum_probs=203.5
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
.+.++||+|+||+||+|+.. +++.||||++.... ......+.+|+.++..++||||++++++|.+.+..++||||+
T Consensus 77 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~ 156 (437)
T 4aw2_A 77 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY 156 (437)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecC
Confidence 34688999999999999987 47889999997532 122345889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 157 ~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 157 VGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999999642 35689999999999999999999998 999999999999999999999999999986655444
Q ss_pred cceecccccccccCccccc-----cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceec
Q 004689 567 HVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 641 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~-----~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 641 (736)
......+||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+..+.... .+
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~----~~---- 302 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF----QF---- 302 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC----CC----
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc----cC----
Confidence 4445567999999999997 4678999999999999999999999998665333332332221111 11
Q ss_pred cCccCCcCCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 004689 642 DPSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 681 (736)
Q Consensus 642 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~ 681 (736)
+...... ...+.+++.+|+..+|++ ||+++|++++
T Consensus 303 -p~~~~~~----s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 -PTQVTDV----SENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -CSSCCCS----CHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -CcccccC----CHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1111112 234788999999888887 9999999876
No 70
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.3e-40 Score=344.04 Aligned_cols=256 Identities=25% Similarity=0.414 Sum_probs=207.9
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
.+.+.+.||+|+||.||+|...++..||||++.... .....+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 91 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMEN 91 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCC
Confidence 445678999999999999999888899999987543 335678999999999999999999999874 457999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
++|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 92 ~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 92 GSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp CBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999998532 223689999999999999999999998 99999999999999999999999999998665443333
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+.. ..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~----~~~~~~-----~~--- 230 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQN----LERGYR-----MV--- 230 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHH----HHTTCC-----CC---
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH----HHHHH----HhcccC-----CC---
Confidence 334457889999999998889999999999999999999 99999765421 12111 111110 00
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
.+......+.+++..|++.+|++|||+.++++.|+++...
T Consensus 231 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 231 -RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 1112234688999999999999999999999999998654
No 71
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.5e-40 Score=344.11 Aligned_cols=250 Identities=30% Similarity=0.431 Sum_probs=191.9
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcc----cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ----GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~----~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||.||+|.+. ++.||||+++..... ..+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 9 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (271)
T 3dtc_A 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87 (271)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEEC
T ss_pred eeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEc
Confidence 446789999999999999986 899999998754322 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--------CCcEEEEeecC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--------HMRAKVSDFGL 557 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~--------~~~~kl~DFGl 557 (736)
+++++|.+++. ...+++..++.++.|++.||.|||+++..+|+||||||+|||++. ++.+||+|||+
T Consensus 88 ~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 88 ARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp CTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred CCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999884 346889999999999999999999983223999999999999986 77899999999
Q ss_pred CccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCc
Q 004689 558 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 637 (736)
Q Consensus 558 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 637 (736)
++....... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .... .. .....
T Consensus 163 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~---~~-~~~~~ 231 (271)
T 3dtc_A 163 AREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL----AVAY---GV-AMNKL 231 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHH---HH-HTSCC
T ss_pred ccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH---hh-hcCCC
Confidence 975533222 2346899999999999989999999999999999999999999765411 1111 11 11111
Q ss_pred ceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 004689 638 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 684 (736)
Q Consensus 638 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 684 (736)
. ...+......+.+++.+|++.||.+|||+.|++++|++
T Consensus 232 ~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 232 A--------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp C--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred C--------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1 11112223468899999999999999999999999975
No 72
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=343.77 Aligned_cols=247 Identities=25% Similarity=0.348 Sum_probs=193.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--------------------------cchhhhhHHHHHhhcC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------------------------GKREFTNEVTLLSRIH 462 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--------------------------~~~~~~~E~~il~~l~ 462 (736)
|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 456789999999999999875 6889999998654311 1356889999999999
Q ss_pred CCceeeEeeeeee--CCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCC
Q 004689 463 HRNLVQFLGYCQE--EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 540 (736)
Q Consensus 463 HpnIv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~ 540 (736)
||||+++++++.+ ....++||||+++|+|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 9999999999986 568899999999999987542 34689999999999999999999998 9999999999
Q ss_pred CEEEcCCCcEEEEeecCCccccCCCCcceecccccccccCccccccCc---CCCcchhHHHHHHHHHHHhCCCcCccccc
Q 004689 541 NILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKF 617 (736)
Q Consensus 541 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~DVwSlGvvl~elltG~~p~~~~~~ 617 (736)
|||++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999986543322 233456999999999997654 47789999999999999999999975441
Q ss_pred ccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 618 GANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 618 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..... .+........ .... ....+.+++.+|++.||++||++.|++++
T Consensus 246 -------~~~~~-~~~~~~~~~~----~~~~----~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 -------MCLHS-KIKSQALEFP----DQPD----IAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -------HHHHH-HHHHCCCCCC----SSSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -------HHHHH-HHhcccCCCC----Cccc----cCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11111 1111111100 0111 22358899999999999999999999765
No 73
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.7e-40 Score=371.76 Aligned_cols=254 Identities=25% Similarity=0.428 Sum_probs=201.8
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
.+.+.+.||+|+||.||+|.+..+..||||+++... .....|.+|+++|++++||||+++++++.+ +..++||||+++
T Consensus 185 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~ 262 (452)
T 1fmk_A 185 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 262 (452)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred HceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcC
Confidence 345678999999999999999888889999987543 235679999999999999999999999876 678999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 263 gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 263 GSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp CBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred CCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 9999999532 234588999999999999999999998 99999999999999999999999999998664433333
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....+|..|+|||.+.+..++.++|||||||++|||++ |+.||.+.... .+.. .+..+.. .
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~----~i~~~~~---------~ 400 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLD----QVERGYR---------M 400 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHH----HHHTTCC---------C
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH----HHHH----HHHcCCC---------C
Confidence 334457889999999999999999999999999999999 99999765421 1211 1112210 0
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
..+......+.+++.+|++.||++|||+++|++.|+++.
T Consensus 401 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 111223346889999999999999999999999998764
No 74
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-40 Score=357.73 Aligned_cols=251 Identities=21% Similarity=0.328 Sum_probs=204.4
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
.|.+.+.||+|+||.||+|... +++.||+|++..........+.+|+.+|++++||||+++++++.+....++||||+.
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 3556789999999999999876 688999999976655455678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--CCcEEEEeecCCccccCCC
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~--~~~~kl~DFGla~~~~~~~ 565 (736)
+|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 132 gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 132 GGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999998532 34689999999999999999999998 9999999999999974 4789999999998654332
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.... .....+. .... .+++..
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~i~----~~~~--~~~~~~ 273 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNVK----RCDW--EFDEDA 273 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHHH----HCCC--CCCSST
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH----HHHHHHH----hCCC--CCCccc
Confidence 233446999999999999999999999999999999999999999765421 1111111 1111 011111
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.... ...+.+++..|++.||++|||+.|++++
T Consensus 274 ~~~~----s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSV----SPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccC----CHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1122 3458899999999999999999999876
No 75
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.7e-40 Score=352.77 Aligned_cols=245 Identities=22% Similarity=0.352 Sum_probs=200.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 456789999999999999974 78999999986432 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+ +|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 91 ~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 91 A-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp C-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred C-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9 6899888843 45689999999999999999999998 99999999999999999999999999998654332
Q ss_pred CcceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||...........+ ...
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i-----------------~~~ 223 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV-----------------NSC 223 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC-----------------CSS
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH-----------------HcC
Confidence 2234569999999999988776 67999999999999999999999865432221111 000
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
. ...+......+.+++.+|++.||.+|||+.|++++-
T Consensus 224 ~-~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 224 V-YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp C-CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred C-CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 0 001111234578999999999999999999998874
No 76
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=357.37 Aligned_cols=259 Identities=25% Similarity=0.423 Sum_probs=207.6
Q ss_pred HHHhhccccccCceEEEEEEEC------CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 481 (736)
.+.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.++++++||||+++++++...+..++
T Consensus 48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 127 (343)
T 1luf_A 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 127 (343)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEE
Confidence 3456788999999999999875 347899999975432 234678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhccccc--------------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCC
Q 004689 482 VYEFMHNGTLKEHLYGTLTH--------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 541 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~N 541 (736)
||||+++|+|.+++...... ...+++..++.++.|++.||.|||++ +|+||||||+|
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~N 204 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN 204 (343)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcce
Confidence 99999999999999653211 25689999999999999999999998 99999999999
Q ss_pred EEEcCCCcEEEEeecCCccccCCCC-cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCccccccc
Q 004689 542 ILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGA 619 (736)
Q Consensus 542 ILl~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~ 619 (736)
||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 283 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE- 283 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-
Confidence 9999999999999999975432221 22234568999999999998899999999999999999999 99999765421
Q ss_pred ccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 620 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 620 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.+.. .+..+.... .+......+.+++..|++.||++||++.||+++|+++..
T Consensus 284 ---~~~~----~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 284 ---EVIY----YVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp ---HHHH----HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ---HHHH----HHhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 1211 222222211 111223468899999999999999999999999998754
No 77
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3e-40 Score=352.48 Aligned_cols=262 Identities=24% Similarity=0.357 Sum_probs=206.5
Q ss_pred HhhccccccCceEEEEEEEC-----CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeC--CeEEEE
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLV 482 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-----~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~~lV 482 (736)
.+.+.||+|+||+||++.+. +++.||||+++.... .....+.+|++++++++||||+++++++.+. ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 56789999999999998753 578999999976532 3356689999999999999999999999874 678999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
|||+++|+|.+++.. ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 114 ~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp ECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999853 3488999999999999999999998 99999999999999999999999999998665
Q ss_pred CCCCc--ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccccccc-----ccccH--HHHHHHhhh
Q 004689 563 DGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA-----NCRNI--VQWAKLHIE 633 (736)
Q Consensus 563 ~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~-----~~~~l--~~~~~~~~~ 633 (736)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..... .........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 43322 2234458889999999999899999999999999999999999987543110 00000 001111111
Q ss_pred cCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 634 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 634 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
. ......+......+.+++.+|++.||++|||+.|+++.|+.+....
T Consensus 266 ~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 266 R---------GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp T---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred c---------ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 1 1111122233456899999999999999999999999999886544
No 78
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.5e-40 Score=349.54 Aligned_cols=260 Identities=26% Similarity=0.393 Sum_probs=209.3
Q ss_pred HHHhhccccccCceEEEEEEE------CCCcEEEEEEeccCCc-ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ 480 (736)
.+.+.+.||+|+||.||+|++ .+++.||||+++.... .....+.+|+.+++++ +||||+++++++...+..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 103 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcE
Confidence 455678999999999999985 2467899999975533 2346788999999999 9999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccc--------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC
Q 004689 481 LVYEFMHNGTLKEHLYGTLT--------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 546 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~ 546 (736)
+||||+++|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+|||++.
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTH 180 (313)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEET
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcC
Confidence 99999999999999965421 123489999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccH
Q 004689 547 HMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 624 (736)
Q Consensus 547 ~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l 624 (736)
++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.||....... .+
T Consensus 181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~ 257 (313)
T 1t46_A 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS---KF 257 (313)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---HH
T ss_pred CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---HH
Confidence 999999999999866544332 2234457889999999999999999999999999999999 999997654221 11
Q ss_pred HHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 625 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 625 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
..... .+. . . ..+......+.+++.+|++.||.+|||+.|++++|++++.
T Consensus 258 ~~~~~----~~~-~----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 258 YKMIK----EGF-R----M----LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHH----HTC-C----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhc----cCC-C----C----CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 11111 111 0 0 0111223458899999999999999999999999998864
No 79
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=356.57 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=196.7
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCCCCH
Q 004689 413 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 491 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~gsL 491 (736)
.+.||+|+||.||+|... +|+.||+|+++.........+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999875 6899999999876555567899999999999999999999999999999999999999999
Q ss_pred HHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE--cCCCcEEEEeecCCccccCCCCcce
Q 004689 492 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL--DKHMRAKVSDFGLSKFAVDGASHVS 569 (736)
Q Consensus 492 ~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl--~~~~~~kl~DFGla~~~~~~~~~~~ 569 (736)
.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 998853 234688999999999999999999998 99999999999999 5678999999999986543322 2
Q ss_pred ecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcC
Q 004689 570 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 649 (736)
Q Consensus 570 ~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 649 (736)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+. . ...... ... +.......+
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~---~~i~~~-~~~--~~~~~~~~~ 315 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET----L---NNILAC-RWD--LEDEEFQDI 315 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----H---HHHHHT-CCC--SCSGGGTTS
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH----H---HHHHhc-cCC--CChhhhccC
Confidence 334699999999999988999999999999999999999999976542211 1 111111 100 011111112
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 650 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 650 ~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
...+.+++.+|++.||.+||++.|++++
T Consensus 316 ----~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 316 ----SEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp ----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----CHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 2458899999999999999999999986
No 80
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.2e-40 Score=355.96 Aligned_cols=267 Identities=16% Similarity=0.235 Sum_probs=204.7
Q ss_pred HHHhhccccccCceEEEEEEECC------CcEEEEEEeccCCccc-----------chhhhhHHHHHhhcCCCceeeEee
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSYQG-----------KREFTNEVTLLSRIHHRNLVQFLG 471 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~~~~-----------~~~~~~E~~il~~l~HpnIv~l~~ 471 (736)
.|.+.+.||+|+||+||+|.+.. ++.||||++....... ...+..|+..++.++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 45667899999999999998864 4789999987543211 112334566677788999999999
Q ss_pred eeeeC----CeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc--
Q 004689 472 YCQEE----GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-- 545 (736)
Q Consensus 472 ~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~-- 545 (736)
++... ...++||||+ +++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 98764 4589999999 99999998642 35689999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeecCCccccCCCCc------ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccccccc
Q 004689 546 KHMRAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA 619 (736)
Q Consensus 546 ~~~~~kl~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~ 619 (736)
.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 8899999999999765332211 113345999999999999999999999999999999999999999864322
Q ss_pred ccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 620 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 620 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
.....+...... ..+..++++.+... .....+.+++..|++.+|.+||++.+|++.|++++...
T Consensus 268 --~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 268 --PKYVRDSKIRYR-ENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp --HHHHHHHHHHHH-HCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHhh-hhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 122222222211 12334444443221 12245888999999999999999999999999987643
No 81
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.6e-39 Score=341.19 Aligned_cols=260 Identities=17% Similarity=0.227 Sum_probs=207.7
Q ss_pred HHhhccccccCceEEEEEEE-CCCcEEEEEEeccCCcccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+|+.+++++ +|+|++++++++......++||||+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 88 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL- 88 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence 45678999999999999986 478999999986432 345688999999999 7999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc-----EEEEeecCCcccc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFAV 562 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~-----~kl~DFGla~~~~ 562 (736)
+++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+|||+++...
T Consensus 89 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 89 GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999999643 34589999999999999999999998 9999999999999987776 9999999998654
Q ss_pred CCCCc------ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 563 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 563 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .............
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~ 241 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ-KYERIGEKKQSTP 241 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH-HHHHHHHHHHHSC
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH-HHHHHHhhccCcc
Confidence 43221 2344569999999999999999999999999999999999999998754222111 1111111111111
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
... +... ....+.+++..|++.||++||++++|++.|++++..
T Consensus 242 ~~~-----~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 242 LRE-----LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHH-----HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHH-----HHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 110 0111 234688999999999999999999999999998653
No 82
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.2e-39 Score=343.30 Aligned_cols=261 Identities=20% Similarity=0.238 Sum_probs=196.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
|.+.+.||+|+||+||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 345688999999999999886 6889999999755332 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
.+ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 84 DQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp SE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred CC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 86 55555532 235689999999999999999999998 99999999999999999999999999998654322
Q ss_pred cceecccccccccCccccccCc-CCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhc---CCcceec-
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES---GDIQGII- 641 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~- 641 (736)
.......||+.|+|||++.+.. ++.++|||||||++|||++|..|+...... ............. .......
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH---HHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCChhhhhhhcc
Confidence 2233456899999999998765 899999999999999999988886433211 1111111111111 0000000
Q ss_pred --c---------CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 642 --D---------PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 642 --d---------~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+ ..............+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000001111233467899999999999999999999875
No 83
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-40 Score=349.20 Aligned_cols=243 Identities=23% Similarity=0.375 Sum_probs=200.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~ 87 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence 345789999999999999886 68999999987542 12345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 88 IEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 999999999853 34688999999999999999999998 9999999999999999999999999999865332
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ..... .+.+ ..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------~~~i~-~~~~------~~ 222 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-------YEKIL-NAEL------RF 222 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HHHHH-HCCC------CC
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-------HHHHH-hCCC------CC
Confidence 2345799999999999999999999999999999999999999976542111 11111 1111 11
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 681 (736)
...+ ...+.+++.+|++.||++|| +++||+++
T Consensus 223 p~~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 223 PPFF----NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CTTS----CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCC----CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1122 23578999999999999999 88998876
No 84
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5e-40 Score=351.23 Aligned_cols=261 Identities=24% Similarity=0.377 Sum_probs=194.9
Q ss_pred HHHHhhccccccCceEEEEEEECCC----cEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeE--
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLKDG----KEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS-- 479 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~~~----~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~-- 479 (736)
..+.+.+.||+|+||+||+|++... ..||||+++... ......+.+|++++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 3456788999999999999987643 279999987542 23356789999999999999999999999877655
Q ss_pred ----EEEEEecCCCCHHHHhhcccc--cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEE
Q 004689 480 ----VLVYEFMHNGTLKEHLYGTLT--HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 553 (736)
Q Consensus 480 ----~lV~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~ 553 (736)
++||||+.+|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEEC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEe
Confidence 999999999999999854321 122588999999999999999999998 99999999999999999999999
Q ss_pred eecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHh
Q 004689 554 DFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 631 (736)
Q Consensus 554 DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~ 631 (736)
|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.....
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~~-- 253 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA----EIYNYLI-- 253 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH--
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH----HHHHHHh--
Confidence 99999865433221 2233457889999999999999999999999999999999 99999865422 2222111
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
.+.. ...+......+.+++.+|++.||++|||+.|+++.|++++..
T Consensus 254 --~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 254 --GGNR---------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp --TTCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --cCCC---------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1110 011122234688999999999999999999999999998753
No 85
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.3e-39 Score=347.39 Aligned_cols=267 Identities=22% Similarity=0.293 Sum_probs=191.2
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
.|.+.+.||+|+||+||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 3556789999999999999876 689999999875532 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccc--ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 487 HNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 487 ~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
+ |+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 8 59999885432 1224588999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcce----
Q 004689 565 ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG---- 639 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~---- 639 (736)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.+..... .......
T Consensus 162 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~ 239 (317)
T 2pmi_A 162 VN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTP-NESLWPSVTKL 239 (317)
T ss_dssp CC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC-CTTTCGGGGGC
T ss_pred cc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC-ChhHhhhhhhh
Confidence 22 2234468999999999976 468999999999999999999999998655322111111110000 0000000
Q ss_pred -eccCccCC------------cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 640 -IIDPSLLD------------EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 640 -~~d~~l~~------------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
...+.+.. .........+.+++.+|++.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00000000 0001122468899999999999999999999875
No 86
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.3e-40 Score=350.15 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=196.0
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCC---------
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--------- 477 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--------- 477 (736)
.|.+.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|+.+|++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 4556789999999999999987 789999999975432 33567899999999999999999999986543
Q ss_pred ------------------------------------------------eEEEEEEecCCCCHHHHhhcccccccccCHHH
Q 004689 478 ------------------------------------------------RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIK 509 (736)
Q Consensus 478 ------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~ 509 (736)
..++||||+++|+|.+++.... ......+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~ 165 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHGV 165 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhHH
Confidence 3799999999999999997543 234456777
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC-----------cceecccccccc
Q 004689 510 RLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-----------HVSSIVRGTVGY 578 (736)
Q Consensus 510 ~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt~~Y 578 (736)
++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 899999999999999998 999999999999999999999999999986544321 122335699999
Q ss_pred cCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHH
Q 004689 579 LDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIE 658 (736)
Q Consensus 579 ~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 658 (736)
+|||++.+..++.++|||||||++|||++|..|+.... .+.. ........ .........+.
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~------~~~~----~~~~~~~~---------~~~~~~~~~~~ 303 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV------RIIT----DVRNLKFP---------LLFTQKYPQEH 303 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH------HHHH----HHHTTCCC---------HHHHHHCHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH------HHHH----HhhccCCC---------cccccCChhHH
Confidence 99999999999999999999999999999977653221 1111 11111111 01122334578
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 004689 659 EKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 659 ~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+++.+|++.||++|||+.|++++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHccCCCCcCCCHHHHhhc
Confidence 89999999999999999999874
No 87
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7.9e-40 Score=342.55 Aligned_cols=258 Identities=23% Similarity=0.369 Sum_probs=203.6
Q ss_pred HHhhccccccCceEEEEEEECC----CcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.+.||+|+||+||+|.+.. +..||+|++.... ......+.+|+.++++++||||+++++++.++ ..++|||
T Consensus 14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e 92 (281)
T 3cc6_A 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIME 92 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEE
T ss_pred eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEe
Confidence 4567899999999999998652 3469999987653 23456789999999999999999999998754 5689999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 93 LYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp CCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred cCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999998532 34588999999999999999999998 9999999999999999999999999999866544
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
.........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...... +....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----~~~~~~~~----~~~~~---- 234 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIGVLEK----GDRLP---- 234 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----GHHHHHHH----TCCCC----
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH----HHHHHHhc----CCCCC----
Confidence 3333344557889999999998899999999999999999998 99999754422 22221111 11100
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIERE 691 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 691 (736)
.+......+.+++.+|++.||++||++.|++++|+++...++.
T Consensus 235 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 235 -----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 0111224588999999999999999999999999999876654
No 88
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=347.32 Aligned_cols=251 Identities=22% Similarity=0.298 Sum_probs=195.5
Q ss_pred HHHHHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--cchhhhhHHHHHhhc-CCCceeeEeeeeeeCC
Q 004689 402 LSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 477 (736)
Q Consensus 402 ~~~i~~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 477 (736)
..++....+.+.++||+|+||+||+|+.. +++.||||++...... ....+..|+..+.++ +||||++++++|.+.+
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 34555667778899999999999999987 7899999998654322 233455566666555 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecC
Q 004689 478 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 557 (736)
Q Consensus 478 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGl 557 (736)
..++||||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~ 203 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL 203 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred EEEEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEcccee
Confidence 999999999 67999888543 34689999999999999999999998 999999999999999999999999999
Q ss_pred CccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCc
Q 004689 558 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 637 (736)
Q Consensus 558 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 637 (736)
++...... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... | ..+..+..
T Consensus 204 a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~--~~~~~~~~ 269 (311)
T 3p1a_A 204 LVELGTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------W--QQLRQGYL 269 (311)
T ss_dssp CEECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------H--HHHTTTCC
T ss_pred eeecccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------H--HHHhccCC
Confidence 87653322 2334569999999998875 789999999999999999999776654321 1 11111111
Q ss_pred ceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 638 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 638 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
. +.+. ......+.+++.+|++.||++|||+.|++++
T Consensus 270 ~----~~~~----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 270 P----PEFT----AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp C----HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred C----cccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1 1111 1123468899999999999999999999864
No 89
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.7e-40 Score=351.20 Aligned_cols=264 Identities=25% Similarity=0.383 Sum_probs=205.4
Q ss_pred HHHHhhccccccCceEEEEEEE-----CCCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeC--CeE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRS 479 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~ 479 (736)
..+.+.+.||+|+||.||+|++ .+++.||||++..... .....+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3456678999999999999984 3688999999975432 3346789999999999999999999999876 678
Q ss_pred EEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
++||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 101 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 9999999999999998532 34589999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCC--cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccccc-------ccccccHHHHHHH
Q 004689 560 FAVDGAS--HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-------GANCRNIVQWAKL 630 (736)
Q Consensus 560 ~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~-------~~~~~~l~~~~~~ 630 (736)
....... .......||..|+|||++.+..++.++|||||||++|||++|..|+..... +............
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 6644332 223345688999999999999999999999999999999999998653210 0000111111111
Q ss_pred hhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 631 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 631 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
....+.. ...+......+.+++.+|++.||.+|||+.|+++.|++++
T Consensus 255 ~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGKR---------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCC---------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1111111 1112223346889999999999999999999999999875
No 90
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=340.77 Aligned_cols=254 Identities=26% Similarity=0.410 Sum_probs=205.5
Q ss_pred hccccccCceEEEEEEEC---CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 413 EKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
++.||+|+||.||+|.+. ++..||||+++... ......+.+|++++++++||||+++++++ ..+..++||||+++
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred hccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 348999999999999864 57889999997643 23456788999999999999999999999 55678999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
++|.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 94 ~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (287)
T 1u59_A 94 GPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 167 (287)
T ss_dssp EEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred CCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCccee
Confidence 999999853 235689999999999999999999998 99999999999999999999999999998664333221
Q ss_pred --eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 569 --SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 569 --~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
.....||+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+... +..+...
T Consensus 168 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~----i~~~~~~------- 232 (287)
T 1u59_A 168 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMAF----IEQGKRM------- 232 (287)
T ss_dssp CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----HHHHH----HHTTCCC-------
T ss_pred eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----HHHHH----HhcCCcC-------
Confidence 223457899999999998889999999999999999998 99999765421 12221 1122111
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 690 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 690 (736)
..+......+.+++..|++.+|++||++.|++++|+.+.....
T Consensus 233 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 233 --ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp --CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1112233468899999999999999999999999999876443
No 91
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.3e-39 Score=340.04 Aligned_cols=250 Identities=32% Similarity=0.566 Sum_probs=199.3
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCccc-------chhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG-------KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~-------~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
.+.+.+.||+|+||+||+|++. +++.||||++....... .+.+.+|+.++++++||||+++++++.+.. +
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~ 97 (287)
T 4f0f_A 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--R 97 (287)
T ss_dssp TEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--E
T ss_pred cceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--e
Confidence 3456789999999999999875 78999999986543322 156889999999999999999999997665 6
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEcCCCc-----EEEE
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMR-----AKVS 553 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--iiHrDikp~NILl~~~~~-----~kl~ 553 (736)
+||||+++|+|.+++... ...+++..++.++.|++.||.|||+. + |+||||||+|||++.++. +||+
T Consensus 98 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred EEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 999999999999988542 35689999999999999999999998 7 999999999999988776 9999
Q ss_pred eecCCccccCCCCcceecccccccccCccccc--cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHh
Q 004689 554 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYI--SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 631 (736)
Q Consensus 554 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~ 631 (736)
|||+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .......
T Consensus 172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~~~~~ 242 (287)
T 4f0f_A 172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMI 242 (287)
T ss_dssp CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH-----HHHHHHH
T ss_pred CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH-----HHHHHHH
Confidence 9999974332 233456999999999984 4567889999999999999999999997654221 1111111
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 684 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 684 (736)
...+ . .+.+ +......+.+++..|++.||++|||+.||++.|++
T Consensus 243 ~~~~-~----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 243 REEG-L----RPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHSC-C----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred hccC-C----CCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1111 1 1111 12223468899999999999999999999999975
No 92
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-39 Score=350.80 Aligned_cols=257 Identities=22% Similarity=0.254 Sum_probs=197.3
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccC-----CcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-----SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~-----~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 481 (736)
..|.+.+.||+|+||+||+|... +++.||+|++... .......+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 105 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL 105 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence 45667889999999999999875 6889999998643 22334678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhccccc------------------------------------ccccCHHHHHHHHHHHHHHHHHHH
Q 004689 482 VYEFMHNGTLKEHLYGTLTH------------------------------------EQRINWIKRLEIAEDAAKGIEYLH 525 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~qia~~L~~LH 525 (736)
||||+++|+|.+++...... ...+++..+..++.|++.||.|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998532111 223467778889999999999999
Q ss_pred hCCCCceecCCCCCCCEEEcCCC--cEEEEeecCCccccCCC---CcceecccccccccCcccccc--CcCCCcchhHHH
Q 004689 526 TGCVPAIIHRDLKSSNILLDKHM--RAKVSDFGLSKFAVDGA---SHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSF 598 (736)
Q Consensus 526 ~~~~~~iiHrDikp~NILl~~~~--~~kl~DFGla~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DVwSl 598 (736)
+. +|+||||||+|||++.++ .+||+|||+++...... ........||+.|+|||++.+ ..++.++|||||
T Consensus 186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 262 (345)
T 3hko_A 186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262 (345)
T ss_dssp HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred HC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence 98 999999999999998776 89999999998653322 112344569999999999975 678999999999
Q ss_pred HHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 004689 599 GVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEV 678 (736)
Q Consensus 599 Gvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 678 (736)
||++|||++|+.||......+. ........ .. ...... ......+.+++..|++.||.+||++.|+
T Consensus 263 G~il~el~~g~~pf~~~~~~~~-------~~~~~~~~-~~--~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 263 GVLLHLLLMGAVPFPGVNDADT-------ISQVLNKK-LC--FENPNY----NVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHH-------HHHHHHCC-CC--TTSGGG----GGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHCCCCCCCCChHHH-------HHHHHhcc-cc--cCCccc----ccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 9999999999999976542211 11111111 00 000000 1123458899999999999999999999
Q ss_pred HHH
Q 004689 679 LKD 681 (736)
Q Consensus 679 ~~~ 681 (736)
+++
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 875
No 93
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.6e-40 Score=355.60 Aligned_cols=246 Identities=24% Similarity=0.366 Sum_probs=200.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++|||
T Consensus 19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E 98 (345)
T 1xjd_A 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 98 (345)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 446789999999999999986 68899999997542 22345577899999887 99999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 99 YLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999999853 35688999999999999999999998 9999999999999999999999999999754322
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+ ..+.. .
T Consensus 172 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i----~~~~~------~ 236 (345)
T 1xjd_A 172 D-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE----ELFHSI----RMDNP------F 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH----HHCCC------C
T ss_pred C-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH----HHHHHH----HhCCC------C
Confidence 2 2234567999999999999999999999999999999999999999765421 121111 11111 1
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHH-HHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSIS-EVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-ev~~~ 681 (736)
.... ....+.+++.+|++.||++||++. ||.++
T Consensus 237 ~p~~----~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 237 YPRW----LEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp CCTT----SCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred CCcc----cCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1111 224578999999999999999997 77654
No 94
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.9e-40 Score=346.82 Aligned_cols=261 Identities=31% Similarity=0.511 Sum_probs=200.7
Q ss_pred HHHHHHHhhccccccCceEEEEEEECCCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEE
Q 004689 405 IEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 405 i~~~~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 482 (736)
+....+.+.++||+|+||+||+|.+. ..+|+|+++.... .....+.+|++++++++||||+++++++.. +..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEE
Confidence 34445667889999999999999875 4699998875432 234678899999999999999999998764 457899
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EecCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 9999999999998632 45689999999999999999999998 99999999999999999999999999997543
Q ss_pred CC-CCcceecccccccccCccccc---cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 563 DG-ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 563 ~~-~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
.. .........||+.|+|||++. +..++.++|||||||++|||++|+.||......+ .+..... .+..
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---~~~~~~~----~~~~- 255 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QIIFMVG----RGYA- 255 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHH----HTCC-
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH---HHHHHHh----cCCC-
Confidence 21 222333456999999999986 5678889999999999999999999997654211 1111111 1111
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
.+.+. .........+.+++..|++.+|++||++.||+++|+.+.
T Consensus 256 ---~~~~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 256 ---SPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp ---CCCST-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred ---Ccchh-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 11111 111122346889999999999999999999999999774
No 95
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.5e-39 Score=337.73 Aligned_cols=248 Identities=21% Similarity=0.310 Sum_probs=200.6
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeC--CeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~~lV~e~ 485 (736)
+.+.+.||+|+||+||+|++. ++.||||++.... ....+.+.+|+.++++++||||+++++++.+. ...++||||
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 12 LNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred hHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 446789999999999999986 8999999997553 23345789999999999999999999999877 788999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
+++|+|.+++... ....+++..++.++.|++.||.|||+. + |+||||||+||+++.++.++|+|||++.....
T Consensus 91 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 91 MPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp CTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999643 223589999999999999999999997 7 99999999999999999999999998754221
Q ss_pred CCCcceecccccccccCccccccCcCCC---cchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 564 GASHVSSIVRGTVGYLDPEYYISQQLTD---KSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~---~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
....||+.|+|||.+.+..++. ++|||||||++|||++|+.||......+ ........+.
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~---- 228 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-------IGMKVALEGL---- 228 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-------HHHHHHHSCC----
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-------HHHHHHhcCC----
Confidence 2245899999999998766555 7999999999999999999997654211 1111111111
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 685 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 685 (736)
.+.+.. .....+.+++..|++.||++|||+.|+++.|+++
T Consensus 229 -~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 229 -RPTIPP----GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp -CCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 111112 2234588999999999999999999999999976
No 96
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.8e-40 Score=351.30 Aligned_cols=262 Identities=23% Similarity=0.431 Sum_probs=209.2
Q ss_pred HHHHhhccccccCceEEEEEEEC--------CCcEEEEEEeccCCc-ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCC
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 477 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 477 (736)
..+.+.+.||+|+||.||+|+.. ++..||||++..... .....+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 44567889999999999999863 467899999875432 2345688999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhcccc------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc
Q 004689 478 RSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 545 (736)
Q Consensus 478 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~ 545 (736)
..++||||+++|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+|||++
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 191 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEc
Confidence 99999999999999999975432 123588999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCccccccccccc
Q 004689 546 KHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRN 623 (736)
Q Consensus 546 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~ 623 (736)
.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.... .
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~ 267 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----E 267 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----H
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----H
Confidence 9999999999999865443221 2233457889999999998899999999999999999999 99999765421 1
Q ss_pred HHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 624 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 624 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
+.... ..+... ..+......+.+++..|++.+|.+||++.||+++|++++...
T Consensus 268 ~~~~~----~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 268 LFKLL----KEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HHHHH----HHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHH----hcCCCC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 22211 111111 111122345889999999999999999999999999987654
No 97
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.3e-39 Score=348.71 Aligned_cols=251 Identities=22% Similarity=0.341 Sum_probs=180.8
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcC-CCceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 413 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
++.||+|+||+||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 368999999999999886 6899999998643 3456788999999997 9999999999999999999999999999
Q ss_pred HHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC---cEEEEeecCCccccCCCCc
Q 004689 491 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 491 L~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~---~~kl~DFGla~~~~~~~~~ 567 (736)
|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++...... .
T Consensus 93 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~ 164 (325)
T 3kn6_A 93 LFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-Q 164 (325)
T ss_dssp HHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-C
Confidence 9999953 35689999999999999999999998 999999999999998765 89999999998654332 2
Q ss_pred ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 568 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||................. .+..+... +. .
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-~i~~~~~~--~~----~ 237 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK-KIKKGDFS--FE----G 237 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH-HHTTTCCC--CC----S
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH-HHHcCCCC--CC----c
Confidence 23345689999999999999999999999999999999999999986553222222222222 22222211 00 0
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.........+.+++..|++.||++|||+.|++++
T Consensus 238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0001123468899999999999999999998754
No 98
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-39 Score=349.58 Aligned_cols=263 Identities=24% Similarity=0.371 Sum_probs=208.7
Q ss_pred HHHHhhccccccCceEEEEEEECC------CcEEEEEEeccCCc-ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 479 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 479 (736)
..+.+.+.||+|+||.||+|.... ...||+|++..... .....+.+|+.+++++ +||||+++++++...+..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 345567899999999999998752 24799999875532 2346688999999999 899999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccc----------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc
Q 004689 480 VLVYEFMHNGTLKEHLYGTLT----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR 549 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~ 549 (736)
++||||+++|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGE
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCe
Confidence 999999999999999864321 123578999999999999999999998 9999999999999999999
Q ss_pred EEEEeecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHH
Q 004689 550 AKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQW 627 (736)
Q Consensus 550 ~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~ 627 (736)
+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |..||....... .+...
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~ 279 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS---KFYKL 279 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---HHHHH
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---HHHHH
Confidence 999999999865433322 2234557889999999998899999999999999999999 999997654221 11111
Q ss_pred HHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 628 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 628 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
... +.. . ..+......+.+++..|++.||.+|||+.||+++|+++....
T Consensus 280 ~~~----~~~-----~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 280 VKD----GYQ-----M----AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHH----TCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred Hhc----CCC-----C----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 111 110 0 011112345889999999999999999999999999886544
No 99
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-39 Score=348.77 Aligned_cols=247 Identities=23% Similarity=0.332 Sum_probs=192.2
Q ss_pred HHHhhccccccCceEEEEEEE----CCCcEEEEEEeccCC----cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
.+.+.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+.++++++||||+++++++...+..+
T Consensus 18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 97 (327)
T 3a62_A 18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLY 97 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEE
Confidence 355678999999999999987 478999999997542 223456788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 98 LILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999853 34588889999999999999999998 999999999999999999999999999875
Q ss_pred ccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +.. ... .+..
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~---~i~-~~~~--- 238 (327)
T 3a62_A 171 SIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK----TID---KIL-KCKL--- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHH---HHH-HTCC---
T ss_pred cccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH----HHH---HHH-hCCC---
Confidence 43222 22334569999999999999999999999999999999999999997654211 111 111 1111
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 681 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 681 (736)
.+ +......+.+++.+|++.||++|| ++.|++++
T Consensus 239 ---~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 ---NL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ---CC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ---CC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11 111234588999999999999999 77888776
No 100
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.6e-39 Score=349.19 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=200.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc---cchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.+.||+|+||.||+|+.. +++.||+|+++..... ....+.+|..+++++ +||||+++++++.+.+..++|||
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e 90 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 90 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence 345789999999999999986 5889999999754322 234578899999988 89999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++++||+|||+++.....
T Consensus 91 ~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 91 YVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999999853 35689999999999999999999998 9999999999999999999999999999753322
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccccccccc-ccHHHHHHHhhhcCCcceeccC
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC-RNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..........+..+...
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 237 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----- 237 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-----
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-----
Confidence 2 2234567999999999999999999999999999999999999999753221110 01112222222222211
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 681 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~ev~~~ 681 (736)
+ +......+.+++.+|++.||++||++ .|++++
T Consensus 238 -~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 238 -I----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp -C----CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred -C----CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1 11223457889999999999999995 566654
No 101
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=358.64 Aligned_cols=251 Identities=23% Similarity=0.261 Sum_probs=201.0
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
.+.+.||+|+||+||+|+.+ +++.||||++++.. ......+.+|..++..++||||+++++++.+.+..++||||+
T Consensus 64 ~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~ 143 (412)
T 2vd5_A 64 EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYY 143 (412)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCC
Confidence 34678999999999999986 68999999996532 223456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||+++.......
T Consensus 144 ~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 144 VGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999999532 24688999999999999999999998 999999999999999999999999999986654433
Q ss_pred cceecccccccccCccccc-------cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcce
Q 004689 567 HVSSIVRGTVGYLDPEYYI-------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 639 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~-------~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 639 (736)
......+||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+..+.... .+
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~----~~-- 291 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL----SL-- 291 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC----CC--
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCc----CC--
Confidence 3344567999999999997 3578999999999999999999999998665333222332221110 00
Q ss_pred eccCccCCcCCHHHHHHHHHHHhhccCCCCCCC---CCHHHHHHH
Q 004689 640 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR---PSISEVLKD 681 (736)
Q Consensus 640 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R---Pt~~ev~~~ 681 (736)
+...... ..++.+++.+|+. +|.+| |+++||++|
T Consensus 292 ---p~~~~~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 ---PLVDEGV----PEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---C----CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ---CccccCC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1111112 2357889999999 99988 589998765
No 102
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.4e-39 Score=351.92 Aligned_cols=243 Identities=23% Similarity=0.307 Sum_probs=200.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 122 (350)
T 1rdq_E 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122 (350)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence 345688999999999999986 68999999986542 12345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 123 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 123 VAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp CTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 999999999853 34688999999999999999999998 9999999999999999999999999999865332
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. .+..+.+ .+
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~----~i~~~~~------~~ 257 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYE----KIVSGKV------RF 257 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCC------CC
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH----HHHH----HHHcCCC------CC
Confidence 23456999999999999999999999999999999999999999765421 1111 1111221 11
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~ 681 (736)
... ....+.+++.+|++.||.+||+ ++||+++
T Consensus 258 p~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 258 PSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CTT----CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCC----CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 112 2345889999999999999998 8888776
No 103
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=354.04 Aligned_cols=273 Identities=21% Similarity=0.282 Sum_probs=211.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCC--eEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~lV~e~ 485 (736)
|.+.++||+|+||+||+|++. +++.||||++..... .....+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 456789999999999999887 589999999975432 23456789999999999999999999998655 78999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE----cCCCcEEEEeecCCccc
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl----~~~~~~kl~DFGla~~~ 561 (736)
+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 91 CPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred CCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999986432 223389999999999999999999998 99999999999999 77888999999999865
Q ss_pred cCCCCcceecccccccccCcccccc--------CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhh
Q 004689 562 VDGASHVSSIVRGTVGYLDPEYYIS--------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 633 (736)
Q Consensus 562 ~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 633 (736)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.........
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 167 EDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred cCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 4322 2234569999999999865 56788999999999999999999999765433222222222111111
Q ss_pred cCCcceec---------cCc--cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 634 SGDIQGII---------DPS--LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 634 ~~~~~~~~---------d~~--l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
...+.... ... ............+.+++..|++.||++||+++|+++.+++++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11111110 001 11223456677889999999999999999999999999888653
No 104
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=353.69 Aligned_cols=248 Identities=23% Similarity=0.317 Sum_probs=199.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+|+.++||||+++++++.+.+..++||||
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~ 96 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL 96 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence 456789999999999999876 58899999986542 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+.+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 97 LLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp CTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 999999999853 45689999999999999999999998 9999999999999999999999999999865432
Q ss_pred CcceecccccccccCcccccc---CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 566 SHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~---~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...+...... ...
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-~~~~~~~~~~----~~~----- 237 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-SKEIVHTFET----TVV----- 237 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-HHHHHHHHHH----CCC-----
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-HHHHHHHHhh----ccc-----
Confidence 22345679999999999974 458999999999999999999999997544211 1112221111 110
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-ISEVLKD 681 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~ev~~~ 681 (736)
.++......+.+++.+|++.||.+||+ +.+|.++
T Consensus 238 -----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 238 -----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 111122345889999999999999998 7777653
No 105
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-39 Score=351.66 Aligned_cols=251 Identities=26% Similarity=0.326 Sum_probs=192.4
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
.|.+.+.||+|+||+||+|+.. +++.||||++.... .....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 3567789999999999999987 78999999987543 234668899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc--EEEEeecCCccccCCC
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKFAVDGA 565 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~--~kl~DFGla~~~~~~~ 565 (736)
+|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+|||+++.....
T Consensus 100 ~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 100 GGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp SCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 9999999843 45689999999999999999999998 9999999999999987765 999999999743222
Q ss_pred CcceecccccccccCccccccCcCCCc-chhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDK-SDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~-~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...........+.. .... ....
T Consensus 172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~---~~~~-~~~~------ 240 (361)
T 3uc3_A 172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ---RILS-VKYS------ 240 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHH---HHHT-TCCC------
T ss_pred -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHH---HHhc-CCCC------
Confidence 12233469999999999988877655 8999999999999999999986553322222222 1111 1110
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... .......+.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 241 IPD--DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCT--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCC--cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000 01112457899999999999999999999987
No 106
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.1e-39 Score=342.05 Aligned_cols=263 Identities=24% Similarity=0.368 Sum_probs=199.5
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
.|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 3567889999999999999874 78999999987532 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.........+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 9999999999865433455688999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ........ +..+......
T Consensus 190 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~-~~~~~~~~~~--- 259 (310)
T 2wqm_A 190 TT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKK-IEQCDYPPLP--- 259 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHH-HHTTCSCCCC---
T ss_pred Cc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHH-hhcccCCCCc---
Confidence 22 22334689999999999999999999999999999999999999975431 12222221 1222211111
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
... ....+.+++.+|++.||.+||++.+|++.|+++....
T Consensus 260 -~~~----~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 260 -SDH----YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp -TTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -ccc----cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 111 2235889999999999999999999999999986543
No 107
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.5e-40 Score=343.91 Aligned_cols=249 Identities=24% Similarity=0.421 Sum_probs=200.0
Q ss_pred HHHhhccccccCceEEEEEEECC-C-------cEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKD-G-------KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~-~-------~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
.+.+.+.||+|+||+||+|.... + ..||+|++..........+.+|+.++++++||||+++++++..++..+
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (289)
T 4fvq_A 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI 88 (289)
T ss_dssp GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCE
T ss_pred HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCE
Confidence 45567899999999999998653 3 579999997665555677999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc--------EEE
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--------AKV 552 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~--------~kl 552 (736)
+||||+++|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++. +||
T Consensus 89 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 89 LVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp EEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred EEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeee
Confidence 999999999999999642 34488999999999999999999998 9999999999999998887 999
Q ss_pred EeecCCccccCCCCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCc-CcccccccccccHHHHHHH
Q 004689 553 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEA-ISNEKFGANCRNIVQWAKL 630 (736)
Q Consensus 553 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p-~~~~~~~~~~~~l~~~~~~ 630 (736)
+|||++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..| +..... ......
T Consensus 163 ~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~~~~~~--- 230 (289)
T 4fvq_A 163 SDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS----QRKLQF--- 230 (289)
T ss_dssp CCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH----HHHHHH---
T ss_pred ccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch----HHHHHH---
Confidence 99999864422 123458999999999987 7789999999999999999996554 433221 111111
Q ss_pred hhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 631 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 631 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
......+. ... ...+.+++..|++.||++|||+.|++++|++++.
T Consensus 231 ~~~~~~~~--------~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 231 YEDRHQLP--------APK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HHTTCCCC--------CCS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred hhccCCCC--------CCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11111111 111 2247889999999999999999999999998864
No 108
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=352.85 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=193.9
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCC--CceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHH--RNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~H--pnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||.||+|...+++.||||++..... .....+.+|+.+|++++| |||+++++++..++..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 456789999999999999998899999999875432 234668899999999976 999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+.+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 90 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 90 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 568899999853 35688999999999999999999998 999999999999997 6789999999998654333
Q ss_pred Cc-ceecccccccccCcccccc-----------CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhh
Q 004689 566 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 633 (736)
Q Consensus 566 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 633 (736)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .+ .......
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~-~~~~~~~- 234 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QI-SKLHAII- 234 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HH-HHHHHHH-
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HH-HHHHHHh-
Confidence 22 2334579999999999865 6788899999999999999999999975331 11 1111111
Q ss_pred cCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 634 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 634 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
++.....++......+.+++..|++.||.+|||+.|++++.
T Consensus 235 --------~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 235 --------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp --------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --------cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 11111112222234578999999999999999999998874
No 109
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=348.48 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=197.8
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcE----EEEEEeccC-CcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKE----IAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~----vAvK~l~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 482 (736)
.|.+.+.||+|+||+||+|.+. +++. ||+|.+... .......+.+|+.++++++||||+++++++.... .++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v 94 (327)
T 3lzb_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI 94 (327)
T ss_dssp TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEE
T ss_pred HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEE
Confidence 3456789999999999999875 3443 577777543 2334567899999999999999999999998765 7899
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
+||+.+|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 95 ~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp ECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999998643 34588999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCC-cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 563 DGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 563 ~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
.... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+..... .+..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~~----~~~~--- 237 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILE----KGER--- 237 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH----TTCC---
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHHHHH----cCCC---
Confidence 3322 22233457889999999999999999999999999999999 99999865422 2222111 1110
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
...+......+.+++.+|++.||.+||++.|+++.|+++...
T Consensus 238 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 238 ------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 011112233588999999999999999999999999988643
No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-39 Score=351.19 Aligned_cols=246 Identities=24% Similarity=0.297 Sum_probs=199.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.+.||+|+||.||+|+.. +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++|||
T Consensus 22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E 101 (353)
T 2i0e_A 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 101 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEe
Confidence 445789999999999999987 47889999997542 22345577899999988 89999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 102 YVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999853 34689999999999999999999998 9999999999999999999999999999753322
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+. . ..+.+ .
T Consensus 175 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----~~~~~---i-~~~~~------~ 239 (353)
T 2i0e_A 175 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQS---I-MEHNV------A 239 (353)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH---H-HHCCC------C
T ss_pred C-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH----HHHHH---H-HhCCC------C
Confidence 2 2234567999999999999999999999999999999999999999765422 11111 1 11111 0
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~ 681 (736)
++......+.+++.+|++.||.+||+ ++||+++
T Consensus 240 ----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 ----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11122345889999999999999995 5777765
No 111
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=352.22 Aligned_cols=252 Identities=25% Similarity=0.330 Sum_probs=201.9
Q ss_pred HHhhccccccCceEEEEEEE----CCCcEEEEEEeccCC----cccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ 480 (736)
|.+.+.||+|+||.||+|+. .+++.||||+++... ......+.+|+++++++ +||||+++++++......+
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 135 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH 135 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence 45678999999999999987 368999999987542 22345688899999999 6999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 136 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 99999999999999853 34688999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCcceecccccccccCcccccc--CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+. .......
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~~~~~--- 282 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS---RRILKSE--- 282 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH---HHHHHCC---
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH---HHHhccC---
Confidence 54433334445679999999999985 457899999999999999999999997554222222222 2221110
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKDI 682 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~L 682 (736)
+. ++......+.+++.+|++.||.+|| +++|++++.
T Consensus 283 ----~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11 1122234578899999999999999 999998875
No 112
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=349.38 Aligned_cols=256 Identities=25% Similarity=0.429 Sum_probs=199.9
Q ss_pred HHhhccccccCceEEEEEEECC-----CcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKD-----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~-----~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
+.+.+.||+|+||+||+|.... +..||||+++.... .....+.+|+.++++++||||+++++++...+..++||
T Consensus 46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 125 (333)
T 1mqb_A 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 125 (333)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence 3456889999999999998653 23599999875432 23456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 126 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 126 EYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp ECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred eCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999998632 35688999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCc--ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 564 GASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 564 ~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
.... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.. .+..+...
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~~----~~~~~~~~-- 269 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH----EVMK----AINDGFRL-- 269 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHH----HHHTTCCC--
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH----HHHH----HHHCCCcC--
Confidence 3221 1223346889999999998899999999999999999999 99999755421 1211 11111100
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
..+......+.+++.+|++.+|++||++.||++.|++++..
T Consensus 270 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 270 -------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp -------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01112234688999999999999999999999999998653
No 113
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=350.27 Aligned_cols=248 Identities=24% Similarity=0.355 Sum_probs=186.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
|.+.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 456789999999999999987 57899999987543 345688999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEeecCCccccCCC
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~---~~~~kl~DFGla~~~~~~~ 565 (736)
|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 133 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 133 GELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 999999853 34588999999999999999999998 9999999999999976 889999999999865332
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+.. .+..+... .....
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~----~i~~~~~~--~~~~~ 274 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFR----RILNCEYY--FISPW 274 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH---HHHH----HHHTTCCC--CCTTT
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH---HHHH----HHHhCCCc--cCCch
Confidence 22234569999999999999999999999999999999999999997544211 1111 11111110 00111
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. .....+.+++.+|++.||++|||+.|++++
T Consensus 275 ~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WD----EVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hh----hCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 223458899999999999999999999874
No 114
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.3e-39 Score=336.94 Aligned_cols=250 Identities=21% Similarity=0.267 Sum_probs=202.6
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
..|.+.+.||+|+||.||+|... ++..||+|++..........+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 45667889999999999999876 47789999997665555678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeecCCccccC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl---~~~~~~kl~DFGla~~~~~ 563 (736)
++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++.....
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 89 TGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999998843 45688999999999999999999998 99999999999999 7889999999999976543
Q ss_pred CCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 564 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
.. ......||+.|+|||.+.+. ++.++|||||||++|||++|+.||......+ +.. .+..+.... ..
T Consensus 162 ~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~----~~~~~~~~~--~~ 228 (277)
T 3f3z_A 162 GK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE----VML----KIREGTFTF--PE 228 (277)
T ss_dssp TS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH----HHHHCCCCC--CH
T ss_pred cc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH----HHH----HHHhCCCCC--Cc
Confidence 32 22345699999999988654 8999999999999999999999997654211 111 111111100 00
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.... .....+.+++.+|++.||++||++.|++++
T Consensus 229 ~~~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 229 KDWL----NVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hhhh----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 123468899999999999999999999875
No 115
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.4e-39 Score=344.78 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=203.6
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc------cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++.+....+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45667899999999999999876 6899999998764322 2456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC----cEEEEeec
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 556 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~----~~kl~DFG 556 (736)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999853 34688999999999999999999998 999999999999999887 79999999
Q ss_pred CCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 557 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 557 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
+++....... .....||+.|+|||++.+..++.++|||||||++|||++|..||...... .... . +....
T Consensus 165 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~---~-i~~~~ 234 (321)
T 2a2a_A 165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----ETLA---N-ITSVS 234 (321)
T ss_dssp TCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHH---H-HHTTC
T ss_pred cceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH----HHHH---H-HHhcc
Confidence 9986544322 23446999999999999999999999999999999999999999765421 1111 1 11111
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
. ..++..... ....+.+++.+|++.||++|||+.|++++
T Consensus 235 ~--~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 Y--DFDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp C--CCCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred c--ccChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 011111111 12357899999999999999999999876
No 116
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=340.45 Aligned_cols=269 Identities=24% Similarity=0.365 Sum_probs=202.0
Q ss_pred HHHHHHHHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhc--CCCceeeEeeeeeeC----
Q 004689 403 SDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI--HHRNLVQFLGYCQEE---- 476 (736)
Q Consensus 403 ~~i~~~~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l--~HpnIv~l~~~~~~~---- 476 (736)
.......+.+.+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++..+ +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3344556777899999999999999987 8999999986432 33445555665554 999999999999877
Q ss_pred CeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCC-----CCceecCCCCCCCEEEcCCCcEE
Q 004689 477 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAK 551 (736)
Q Consensus 477 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~-----~~~iiHrDikp~NILl~~~~~~k 551 (736)
...++||||+++|+|.+++.. ..+++..++.++.|++.||.|||+.+ .++|+||||||+|||++.++.+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 788999999999999999953 35889999999999999999999852 23899999999999999999999
Q ss_pred EEeecCCccccCCCCcc---eecccccccccCccccccCcCCCc------chhHHHHHHHHHHHhC----------CCcC
Q 004689 552 VSDFGLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQQLTDK------SDVYSFGVILLELISG----------QEAI 612 (736)
Q Consensus 552 l~DFGla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~------~DVwSlGvvl~elltG----------~~p~ 612 (736)
|+|||+++......... .....||+.|+|||++.+..+..+ +|||||||++|||++| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999997654332221 224569999999999987766665 9999999999999999 5555
Q ss_pred cccccccccccHHHHHHHhhhcCCcceeccCccCCcC-CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 613 SNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 613 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
........ .... ......... ..+...... .......+.+++..|++.||++|||+.||+++|+.+..
T Consensus 263 ~~~~~~~~--~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 263 HDLVPSDP--SYED-MREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTTSCSSC--CHHH-HHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhcCCCC--chhh-hHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 44321111 1111 111111111 111111111 12566779999999999999999999999999998864
No 117
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.5e-39 Score=363.75 Aligned_cols=246 Identities=23% Similarity=0.310 Sum_probs=192.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccC---CcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||.||+|+.. +++.||||++... .......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 229 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECC
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEee
Confidence 456789999999999999875 6899999998753 223345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHh-CCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
+++|+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 230 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 230 ANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 999999998843 4568999999999999999999998 7 9999999999999999999999999999754332
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+. .+.. .
T Consensus 303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i~----~~~~------~ 367 (446)
T 4ejn_A 303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELIL----MEEI------R 367 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HCCC------C
T ss_pred C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHHHH----hCCC------C
Confidence 2 2234467999999999999999999999999999999999999999765421 1111111 1111 0
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 681 (736)
++......+.+++.+|++.||.+|| +++|++++
T Consensus 368 ----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 ----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 1111224588999999999999999 99999876
No 118
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=342.51 Aligned_cols=252 Identities=29% Similarity=0.467 Sum_probs=195.1
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 489 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~g 489 (736)
+.+.+.||+|+||+||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++|
T Consensus 10 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~ 84 (307)
T 2eva_A 10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGG 84 (307)
T ss_dssp EEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTC
T ss_pred eeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCC
Confidence 346789999999999999986 789999998643 235678999999999999999999999874 478999999999
Q ss_pred CHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc-EEEEeecCCccccCCCCcc
Q 004689 490 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-AKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 490 sL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~-~kl~DFGla~~~~~~~~~~ 568 (736)
+|.+++.... ....+++..++.++.|+++||.|||+.+..+|+||||||+|||++.++. +||+|||+++.....
T Consensus 85 ~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---- 159 (307)
T 2eva_A 85 SLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---- 159 (307)
T ss_dssp BHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred CHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----
Confidence 9999996542 2335788889999999999999999933238999999999999998886 799999999754322
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCc
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 648 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 648 (736)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .. ..|.. ..+... .....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~-~~~~~---~~~~~~-----~~~~~ 228 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FR-IMWAV---HNGTRP-----PLIKN 228 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH--HH-HHHHH---HTTCCC-----CCBTT
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH--HH-HHHHH---hcCCCC-----Ccccc
Confidence 123458999999999999999999999999999999999999997543111 01 11111 111111 11112
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 649 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 649 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
. ...+.+++.+|++.||++|||+.|++++|+.+.
T Consensus 229 ~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 229 L----PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp C----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred c----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 2 235789999999999999999999999999874
No 119
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=344.74 Aligned_cols=270 Identities=21% Similarity=0.281 Sum_probs=199.6
Q ss_pred HHHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-----ccchhhhhHHHHHhhcC---CCceeeEeeeee
Q 004689 404 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-----QGKREFTNEVTLLSRIH---HRNLVQFLGYCQ 474 (736)
Q Consensus 404 ~i~~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-----~~~~~~~~E~~il~~l~---HpnIv~l~~~~~ 474 (736)
++....|.+.+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++ ||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 334455677899999999999999974 689999999864321 12346778888888775 999999999998
Q ss_pred eCC-----eEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc
Q 004689 475 EEG-----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR 549 (736)
Q Consensus 475 ~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~ 549 (736)
... ..++||||+. |+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 765 5799999997 59999986432 23489999999999999999999998 9999999999999999999
Q ss_pred EEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHH
Q 004689 550 AKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK 629 (736)
Q Consensus 550 ~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~ 629 (736)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.....
T Consensus 159 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 236 (308)
T 3g33_A 159 VKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236 (308)
T ss_dssp EEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999999998654322 22345689999999999999999999999999999999999999976553222112211110
Q ss_pred HhhhcCCcceec--cCccCC-------cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 630 LHIESGDIQGII--DPSLLD-------EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 630 ~~~~~~~~~~~~--d~~l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
............ ...... ....+....+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000000000000 000000 0001223468899999999999999999999875
No 120
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.4e-39 Score=335.74 Aligned_cols=253 Identities=22% Similarity=0.366 Sum_probs=198.6
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
..+.+.+.||+|+||+||+|... ++..||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 45677899999999999999875 68899999987553 23456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeecCCcccc
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl---~~~~~~kl~DFGla~~~~ 562 (736)
+++|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999865544456789999999999999999999998 99999999999999 456889999999997654
Q ss_pred CCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 563 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 563 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
... ......||+.|+|||++. ..++.++|||||||++|||++|+.||...... .+...... ...... ..
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~----~~~~~~~~--~~~~~~--~~ 247 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE----EVQQKATY--KEPNYA--VE 247 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH--CCCCCC--C-
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH----HHHhhhcc--CCcccc--cc
Confidence 322 223456999999999875 56889999999999999999999999765421 11111111 010000 00
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... ....+.+++.+|++.||++|||+.||+++
T Consensus 248 ---~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 ---CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---cCc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001 12357889999999999999999999864
No 121
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.7e-38 Score=341.89 Aligned_cols=269 Identities=23% Similarity=0.382 Sum_probs=211.0
Q ss_pred cCHHHHHHHHHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhh--cCCCceeeEeeeeeeCC
Q 004689 400 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG 477 (736)
Q Consensus 400 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~--l~HpnIv~l~~~~~~~~ 477 (736)
+...+.....+.+.+.||+|+||.||+|+.. ++.||||++... ....+.+|++++.. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3445555667778899999999999999985 899999998643 34567788998887 78999999999998776
Q ss_pred ----eEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCceecCCCCCCCEEEc
Q 004689 478 ----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLD 545 (736)
Q Consensus 478 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH--------~~~~~~iiHrDikp~NILl~ 545 (736)
..++||||+++|+|.+++.. ..+++..++.++.|++.||.||| +. +|+||||||+|||++
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred CccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 78999999999999999953 35889999999999999999999 66 999999999999999
Q ss_pred CCCcEEEEeecCCccccCCCCc---ceecccccccccCccccccC------cCCCcchhHHHHHHHHHHHhC--------
Q 004689 546 KHMRAKVSDFGLSKFAVDGASH---VSSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG-------- 608 (736)
Q Consensus 546 ~~~~~kl~DFGla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~------~~~~~~DVwSlGvvl~elltG-------- 608 (736)
.++++||+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999999765443322 22345699999999999765 344689999999999999999
Q ss_pred --CCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCc-CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 004689 609 --QEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 685 (736)
Q Consensus 609 --~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 685 (736)
..||....... .....+..... ... ..+.+... ...+....+.+++.+|++.||++|||+.||+++|+++
T Consensus 262 ~~~~p~~~~~~~~--~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 262 DYQLPYYDLVPSD--PSVEEMRKVVC-EQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp CCCCTTTTTSCSS--CCHHHHHHHHT-TSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCccccCcCc--ccHHHHHHHHH-HHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 67776543211 12222222221 111 11222211 1345667899999999999999999999999999988
Q ss_pred HH
Q 004689 686 IV 687 (736)
Q Consensus 686 ~~ 687 (736)
..
T Consensus 335 ~~ 336 (342)
T 1b6c_B 335 SQ 336 (342)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 122
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=346.33 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=203.0
Q ss_pred HHHhhccccccCceEEEEEEE-CCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeee----eCCeEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ----EEGRSVLVY 483 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~----~~~~~~lV~ 483 (736)
.|.+.+.||+|+||.||+|.. .+++.||||++..........+.+|++++++++||||+++++++. .....++||
T Consensus 30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 109 (317)
T 2buj_A 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109 (317)
T ss_dssp EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence 455678999999999999987 478999999987665555677899999999999999999999986 334789999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
||+.+|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999976544456789999999999999999999998 999999999999999999999999999875422
Q ss_pred CCCc--------ceecccccccccCccccccCc---CCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhh
Q 004689 564 GASH--------VSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 564 ~~~~--------~~~~~~gt~~Y~aPE~~~~~~---~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
.... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... ..+.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~- 263 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--DSVALAVQNQ- 263 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--SCHHHHHHCC-
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--chhhHHhhcc-
Confidence 1110 012235799999999987543 7899999999999999999999996532111 1111111110
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 685 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 685 (736)
... .........+.+++.+|++.||.+||++.|++++|+.+
T Consensus 264 --~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 264 --LSI----------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp ----C----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred --CCC----------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 000 00111234588999999999999999999999999876
No 123
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3e-39 Score=339.99 Aligned_cols=259 Identities=27% Similarity=0.395 Sum_probs=204.4
Q ss_pred HHhhc-cccccCceEEEEEEEC---CCcEEEEEEeccCCcc--cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 410 KMLEK-KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 410 ~~~~~-~IG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
+.+.+ .||+|+||+||+|.+. +++.||||+++..... ....+.+|+++++.++||||+++++++ ..+..++||
T Consensus 18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 96 (291)
T 1xbb_A 18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVM 96 (291)
T ss_dssp EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEE
Confidence 34445 8999999999999653 4688999998754322 246789999999999999999999999 567789999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
||+++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 97 EMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp ECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 99999999999953 34588999999999999999999998 999999999999999999999999999986544
Q ss_pred CCCcc--eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 564 GASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 564 ~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
..... .....||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+...
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~----~~~~~~~-- 239 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVTAM----LEKGERM-- 239 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHH----HHTTCCC--
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHH----HHcCCCC--
Confidence 33322 122346789999999998889999999999999999999 99999765421 12221 1122111
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIEREAA 693 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~ 693 (736)
..+......+.+++..|++.||.+||++.||++.|+++........
T Consensus 240 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 240 -------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 1112223468899999999999999999999999999987654443
No 124
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.6e-39 Score=345.80 Aligned_cols=262 Identities=27% Similarity=0.426 Sum_probs=207.8
Q ss_pred HHHHhhccccccCceEEEEEEE------CCCcEEEEEEeccCCc-ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCC-e
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG-R 478 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~-~ 478 (736)
..+.+.+.||+|+||+||+|++ .+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++...+ .
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 106 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 106 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc
Confidence 3455678999999999999974 2468899999976533 2345688999999999 7999999999987654 5
Q ss_pred EEEEEEecCCCCHHHHhhccccc------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC
Q 004689 479 SVLVYEFMHNGTLKEHLYGTLTH------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 546 (736)
Q Consensus 479 ~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~ 546 (736)
.++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE 183 (316)
T ss_dssp CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECC
Confidence 89999999999999999654321 12278999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeecCCccccCCCCc-ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccH
Q 004689 547 HMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 624 (736)
Q Consensus 547 ~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l 624 (736)
++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |..||....... .+
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~ 260 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EF 260 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH---HH
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH---HH
Confidence 999999999999865443322 2334568899999999999999999999999999999998 999997654221 11
Q ss_pred HHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 625 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 625 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
.. .+..+... ..... ....+.+++..|++.||.+|||+.||+++|+.++..
T Consensus 261 ~~----~~~~~~~~-----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 261 CR----RLKEGTRM-----RAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HH----HHHHTCCC-----CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH----HhccCccC-----CCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11 11111111 01111 223588899999999999999999999999998753
No 125
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.6e-39 Score=353.27 Aligned_cols=268 Identities=19% Similarity=0.259 Sum_probs=201.0
Q ss_pred HHHhhcccccc--CceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 409 TKMLEKKIGSG--GFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 409 ~~~~~~~IG~G--~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
.|.+.+.||+| +||+||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 35567899999 99999999987 689999999975432 23456888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||.+.....
T Consensus 106 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 106 SFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp ECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 9999999999986432 24588999999999999999999998 999999999999999999999999999864322
Q ss_pred CCC------cceecccccccccCcccccc--CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhh-h-
Q 004689 564 GAS------HVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI-E- 633 (736)
Q Consensus 564 ~~~------~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~-~- 633 (736)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+........ .
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 111 11223468999999999987 6799999999999999999999999976543221111110000000 0
Q ss_pred ----cC-------------Ccceecc---Ccc------CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 634 ----SG-------------DIQGIID---PSL------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 634 ----~~-------------~~~~~~d---~~l------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. .+...+. +.. ...+.......+.+++.+|++.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 0000000 000 000111223458899999999999999999999876
No 126
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-38 Score=338.99 Aligned_cols=257 Identities=17% Similarity=0.272 Sum_probs=196.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc---cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRL 115 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEe
Confidence 456789999999999999876 6889999998754322 236688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 116 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 116 INGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp CCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 999999999853 34688999999999999999999998 99999999999999999999999999997654433
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
........||+.|+|||++.+..++.++||||||+++|||++|+.||...... .+ ......... . ....
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~----~~~~~~~~~-~--~~~~ 257 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS----VM----GAHINQAIP-R--PSTV 257 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH----HH----HHHHHSCCC-C--GGGT
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH----HH----HHHhccCCC-C--cccc
Confidence 33334456999999999999999999999999999999999999999765421 11 111111110 0 0011
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIVI 688 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~ev~~~L~~~~~~ 688 (736)
... ....+.+++.+|++.||++|| +++++++.|+.++..
T Consensus 258 ~~~----~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 258 RPG----IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp STT----CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred CCC----CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 111 223588899999999999999 999999999987543
No 127
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.2e-40 Score=375.37 Aligned_cols=254 Identities=25% Similarity=0.426 Sum_probs=206.5
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
.+.+.++||+|+||.||+|.+..+..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+.+
T Consensus 268 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~ 345 (535)
T 2h8h_A 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 345 (535)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred hhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcC
Confidence 445678999999999999999988899999997543 335679999999999999999999999876 678999999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
|+|.+++... ....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 346 gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 346 GSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp EEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred CcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 9999999532 234588999999999999999999998 99999999999999999999999999998654322122
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....++..|+|||++....++.++|||||||+||||++ |+.||.+.... .+... +..+...
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~----~~~~~----i~~~~~~--------- 483 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQ----VERGYRM--------- 483 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH----HHHHH----HHTTCCC---------
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HHcCCCC---------
Confidence 233457889999999999999999999999999999999 99999765421 12221 1222110
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
..+......+.+++.+|++.||++|||+.+|++.|+++.
T Consensus 484 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 484 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111222346889999999999999999999999998764
No 128
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-38 Score=335.12 Aligned_cols=262 Identities=22% Similarity=0.325 Sum_probs=204.8
Q ss_pred HHHHhhccccccCceEEEEEEE-CCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeee-eeCCeEEEEEEe
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEF 485 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-~~~~~~~lV~e~ 485 (736)
..|.+.+.||+|+||+||+|+. .+++.||||++.... ....+.+|+.+++.++|++++..+.++ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 3456788999999999999987 478899999875443 245688999999999988877766655 667788999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeecCCcccc
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl---~~~~~~kl~DFGla~~~~ 562 (736)
+ +++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 87 ~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 87 L-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp C-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred c-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9 99999998532 34589999999999999999999998 99999999999999 788999999999998654
Q ss_pred CCCCc------ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 563 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 563 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.......... .
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~ 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-P 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-C
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-h
Confidence 43221 2234569999999999999999999999999999999999999998755333333332222222111 0
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
.. .+...+ ...+.+++..|++.+|++||++.+|++.|+++...
T Consensus 239 ~~-----~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 239 IE-----VLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HH-----HHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hh-----hhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00 001111 24588999999999999999999999999998754
No 129
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-39 Score=344.38 Aligned_cols=241 Identities=23% Similarity=0.341 Sum_probs=199.4
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--------cchhhhhHHHHHhhcCCCceeeEeeeeeeCCe
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 478 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--------~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 478 (736)
..|.+.+.||+|+||+||+|... +++.||||++...... ....+.+|+.++++++||||+++++++.+.+.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 45666789999999999999865 6889999999765321 23468889999999999999999999999999
Q ss_pred EEEEEEecCCC-CHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecC
Q 004689 479 SVLVYEFMHNG-TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 557 (736)
Q Consensus 479 ~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGl 557 (736)
.++||||+.+| +|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 99999999777 99998853 34689999999999999999999998 999999999999999999999999999
Q ss_pred CccccCCCCcceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 558 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 558 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------ 236 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------ 236 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------
Confidence 986544322 234569999999999988776 78899999999999999999999753210
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
....... +......+.+++..|++.||++|||+.|++++
T Consensus 237 ----~~~~~~~--~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ----VEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----TTTCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----HhhccCC--CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 01122358899999999999999999999987
No 130
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=353.54 Aligned_cols=254 Identities=30% Similarity=0.472 Sum_probs=192.4
Q ss_pred HhhccccccCceEEEEEEEC--CC--cEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeee-eCCeEEEEEE
Q 004689 411 MLEKKIGSGGFGVVYYGKLK--DG--KEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-EEGRSVLVYE 484 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~--~~--~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~lV~e 484 (736)
.+.+.||+|+||+||+|++. ++ ..||||+++... ......+.+|+.++++++||||+++++++. .++..++|||
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e 171 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence 35678999999999999864 22 368999986543 233567899999999999999999999875 4567899999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++... ...+++..++.++.|+++||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 172 ~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 172 YMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999632 34578889999999999999999998 9999999999999999999999999999865332
Q ss_pred CCc---ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 565 ASH---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 565 ~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .+..... .+...
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~~~~~----~~~~~-- 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVYLL----QGRRL-- 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHHHHHH----TTCCC--
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHHHHHH----cCCCC--
Confidence 211 2233457889999999999999999999999999999999 67777654421 2222211 11110
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.. +......+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 316 ~~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 316 LQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp CC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00 11123458899999999999999999999999998864
No 131
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=348.80 Aligned_cols=254 Identities=25% Similarity=0.317 Sum_probs=186.4
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcC-CCceeeEeeeee--------eCCe
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQ--------EEGR 478 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~--------~~~~ 478 (736)
.+.+.+.||+|+||.||+|++. +++.||||++..........+.+|+.+++++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 4566789999999999999975 68999999987665555677899999999996 999999999983 3445
Q ss_pred EEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEcCCCcEEEEeec
Q 004689 479 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFG 556 (736)
Q Consensus 479 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--iiHrDikp~NILl~~~~~~kl~DFG 556 (736)
.++||||+. |+|.+++.... ....+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred EEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCc
Confidence 799999996 79999885432 234689999999999999999999998 7 9999999999999999999999999
Q ss_pred CCccccCCCCcc-----------eecccccccccCcccc---ccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccc
Q 004689 557 LSKFAVDGASHV-----------SSIVRGTVGYLDPEYY---ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 622 (736)
Q Consensus 557 la~~~~~~~~~~-----------~~~~~gt~~Y~aPE~~---~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~ 622 (736)
+++......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---- 259 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL---- 259 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----
Confidence 998654332211 1134589999999998 5667889999999999999999999999754311
Q ss_pred cHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 623 NIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 623 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.+.. +... ..........+.+++..|++.||.+||++.|++++|+++..
T Consensus 260 ~~~~--------~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 RIVN--------GKYS--------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp --------------CC--------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhhc--------Cccc--------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1110 0000 00001111247789999999999999999999999998864
No 132
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.1e-39 Score=355.95 Aligned_cols=249 Identities=23% Similarity=0.316 Sum_probs=194.4
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCc--ccchhhhhHHHHHhhcC--CCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~--HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||.||+|...+++.||||++..... .....+.+|+++|++++ ||||+++++++...+..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 556789999999999999988899999999875432 23467899999999996 5999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+.+++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 137 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 137 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 678899999853 34678889999999999999999998 999999999999995 5899999999998654332
Q ss_pred Cc-ceecccccccccCcccccc-----------CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhh
Q 004689 566 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 633 (736)
Q Consensus 566 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 633 (736)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~~~~- 281 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAII- 281 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHH-
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHHHHHh-
Confidence 22 2344579999999999865 3688899999999999999999999975431 111111111
Q ss_pred cCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 634 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 634 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
++.....++......+.+++..|++.||.+||++.|++++-
T Consensus 282 --------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 282 --------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp --------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 11111111111134578999999999999999999998763
No 133
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.3e-39 Score=346.36 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=200.1
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEEe
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
..|.+.+.||+|+||.||+|... +++.||||++.... ....+|++++.++ +||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 34666789999999999999886 68899999986542 3456899999888 799999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC----CcEEEEeecCCccc
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKFA 561 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~----~~~kl~DFGla~~~ 561 (736)
+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+..+ +.+||+|||+++..
T Consensus 98 ~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 98 MKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999853 34689999999999999999999998 99999999999998543 35999999999865
Q ss_pred cCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceec
Q 004689 562 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 641 (736)
Q Consensus 562 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 641 (736)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|..||..... .....+.. .+..+... +
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~----~i~~~~~~--~ 242 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILA----RIGSGKFS--L 242 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-SCHHHHHH----HHHHCCCC--C
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-CCHHHHHH----HHccCCcc--c
Confidence 44322 23345799999999999888899999999999999999999999975431 11112222 22222221 1
Q ss_pred cCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 642 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 642 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.. .+.......+.+++.+|+..||++||++.|++++-
T Consensus 243 ~~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 243 SG----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp CS----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred Cc----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 11 11112234588999999999999999999998763
No 134
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-39 Score=339.11 Aligned_cols=255 Identities=24% Similarity=0.358 Sum_probs=200.5
Q ss_pred hhccccccCceEEEEEEECC----CcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeE-EEEEEe
Q 004689 412 LEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS-VLVYEF 485 (736)
Q Consensus 412 ~~~~IG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~-~lV~e~ 485 (736)
+.++||+|+||+||+|.+.+ +..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 35789999999999998642 23799999875432 3346788999999999999999999999876655 999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+.+|+|.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 105 ~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 105 MCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred ccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999964 235678899999999999999999998 99999999999999999999999999997553321
Q ss_pred ---CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 566 ---SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 566 ---~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
........||+.|+|||.+.+..++.++|||||||++|||++|..|+...... ..+...... +..
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~---~~~~~~~~~----~~~----- 246 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP---FDLTHFLAQ----GRR----- 246 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG---GGHHHHHHT----TCC-----
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH---HHHHHHhhc----CCC-----
Confidence 11223346889999999999999999999999999999999966554332211 122222211 110
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
...+......+.+++..|++.||.+|||+.|+++.|++++..
T Consensus 247 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 247 ----LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 001111224588999999999999999999999999998653
No 135
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.4e-39 Score=339.07 Aligned_cols=255 Identities=30% Similarity=0.467 Sum_probs=198.7
Q ss_pred HHhhccccccCceEEEEEEECC----CcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeee-eCCeEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQ-EEGRSVLVY 483 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~lV~ 483 (736)
+.+.+.||+|+||+||+|.+.+ ...+|+|++..... .....+.+|+.++++++||||+++++++. .++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 4456899999999999998653 23589999875432 33467889999999999999999999864 556789999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
||+++|+|.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 107 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 107 PYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp ECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred eCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999964 235578899999999999999999998 999999999999999999999999999976533
Q ss_pred CCC---cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcce
Q 004689 564 GAS---HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 639 (736)
Q Consensus 564 ~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 639 (736)
... .......||+.|+|||.+.+..++.++|||||||++|||++ |.+||...... .+..... .+...
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~~~~~----~~~~~- 251 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVYLL----QGRRL- 251 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----THHHHHH----TTCCC-
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----HHHHHHh----cCCCC-
Confidence 221 12233457889999999999999999999999999999999 55566544321 2222111 11100
Q ss_pred eccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 640 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 640 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.. +......+.+++..|++.+|++||++.|+++.|++++.
T Consensus 252 -~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 252 -LQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp -CC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CC-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00 11122458899999999999999999999999999864
No 136
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=372.33 Aligned_cols=250 Identities=26% Similarity=0.412 Sum_probs=200.3
Q ss_pred cccccCceEEEEEEEC---CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 415 KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 415 ~IG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
.||+|+||.||+|.+. ++..||||+++.... .....+.+|+++|++++||||++++++|.. +..++||||+.+|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 456799999976532 345679999999999999999999999976 56899999999999
Q ss_pred HHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc--
Q 004689 491 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV-- 568 (736)
Q Consensus 491 L~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~-- 568 (736)
|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 422 L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99999542 45689999999999999999999998 99999999999999999999999999998654332221
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.. .+..+...
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~~----~i~~~~~~--------- 558 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMA----FIEQGKRM--------- 558 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH----HHHH----HHHTTCCC---------
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHH----HHHcCCCC---------
Confidence 122346789999999999999999999999999999998 99999865522 2222 12222211
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
..+......+.+++..|++.+|++||++.+|++.|+.+...
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11222335688999999999999999999999999987643
No 137
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-39 Score=340.76 Aligned_cols=262 Identities=32% Similarity=0.546 Sum_probs=195.1
Q ss_pred HHHHHHHHhhccccccCceEEEEEEECCCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEE
Q 004689 404 DIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 404 ~i~~~~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 481 (736)
|+....+.+.++||+|+||+||+|+.. ..||||+++.... .....+.+|++++++++||||+++++++. ....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEE
Confidence 344455667889999999999999865 4699999875432 23456899999999999999999999764 456799
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
||||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 97 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 99999999999998532 45689999999999999999999998 9999999999999999999999999999754
Q ss_pred cCCC-CcceecccccccccCccccc---cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCc
Q 004689 562 VDGA-SHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 637 (736)
Q Consensus 562 ~~~~-~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 637 (736)
.... ........||+.|+|||++. +..++.++|||||||++|||++|+.||...... ..+... ...+..
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~----~~~~~~ 243 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEM----VGRGSL 243 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH---HHHHHH----HHHTSC
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH---HHHHHH----hccccc
Confidence 3321 22233456999999999986 567888999999999999999999999765421 112221 122221
Q ss_pred ceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 638 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 638 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
..... .........+.+++..|++.+|.+||++.|+++.|+++.
T Consensus 244 ~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 244 SPDLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCCTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred Ccchh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 11111 111222356889999999999999999999999998763
No 138
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=341.70 Aligned_cols=264 Identities=22% Similarity=0.284 Sum_probs=195.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
|.+.+.||+|+||+||+|... +++.||||++...... ....+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (311)
T 4agu_A 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeC
Confidence 345688999999999999986 5899999998654322 2456789999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 85 DHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp SEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999988742 34588999999999999999999998 999999999999999999999999999986543322
Q ss_pred cceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHH-------HhhhcCCc-
Q 004689 567 HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK-------LHIESGDI- 637 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~-------~~~~~~~~- 637 (736)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+..... ........
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 2234568999999999976 6789999999999999999999999976542221111111000 00000000
Q ss_pred c--eeccCccCCc---CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 638 Q--GIIDPSLLDE---YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 638 ~--~~~d~~l~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
. ..-++.-... ........+.+++..|++.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0000000000 001123458899999999999999999999876
No 139
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.2e-39 Score=344.91 Aligned_cols=256 Identities=27% Similarity=0.446 Sum_probs=202.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcE--EEEEEeccCC-cccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKE--IAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~--vAvK~l~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.+.||+|+||.||+|+.. ++.. +|+|++.... ......+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 106 (327)
T 1fvr_A 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 106 (327)
T ss_dssp CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEe
Confidence 456789999999999999875 4554 4999887532 33456789999999999 89999999999999999999999
Q ss_pred ecCCCCHHHHhhccc------------ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEE
Q 004689 485 FMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 552 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl 552 (736)
|+++|+|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEE
Confidence 999999999996542 2234689999999999999999999998 9999999999999999999999
Q ss_pred EeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHh
Q 004689 553 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 631 (736)
Q Consensus 553 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~ 631 (736)
+|||+++..... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .+. ..
T Consensus 184 ~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~----~~ 253 (327)
T 1fvr_A 184 ADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELY----EK 253 (327)
T ss_dssp CCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHH----HH
T ss_pred cccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH----HHH----HH
Confidence 999998743211 11223457889999999998889999999999999999998 99999765421 111 11
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
+..+.. . ..+......+.+++.+|++.+|.+||++.|++++|+.++.
T Consensus 254 ~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 254 LPQGYR-----L----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp GGGTCC-----C----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCC-----C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 122110 0 1111223458899999999999999999999999998864
No 140
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.9e-39 Score=363.68 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=203.1
Q ss_pred hhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 412 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 412 ~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+.++++++||||+++++++......++||||++
T Consensus 189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~ 268 (543)
T 3c4z_A 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN 268 (543)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence 3467999999999999986 689999999965422 224567889999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
+|+|.+++.........+++..+..++.|++.||.|||++ +|+||||||+|||++.++++||+|||+++........
T Consensus 269 gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 269 GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 9999999976544455789999999999999999999998 9999999999999999999999999999865443322
Q ss_pred ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 568 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.+. .. .+..
T Consensus 346 -~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~---i~-~~~~---------- 410 (543)
T 3c4z_A 346 -TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR---VL-EQAV---------- 410 (543)
T ss_dssp -BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH---HH-HCCC----------
T ss_pred -cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH---Hh-hccc----------
Confidence 23457999999999999999999999999999999999999999865422111122221 11 1111
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 681 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~ev~~~ 681 (736)
.++......+.+++.+|++.||++||++ .||.++
T Consensus 411 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 1111223457889999999999999975 666654
No 141
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.8e-39 Score=352.23 Aligned_cols=242 Identities=26% Similarity=0.328 Sum_probs=189.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHH-HhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~i-l~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.+.||+|+||.||+|+.+ +++.||||+++.... .....+..|..+ ++.++||||+++++++.+.+..++|||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E 119 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence 456789999999999999986 578899999976532 223456667776 577899999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++.....
T Consensus 120 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 120 YINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999853 35688889999999999999999998 9999999999999999999999999999854332
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ . .+.+ .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i-------~-~~~~------~ 257 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI-------L-NKPL------Q 257 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHH-------H-HSCC------C
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-------H-hccc------C
Confidence 2 2334567999999999999999999999999999999999999999765422211111 1 1111 1
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISE 677 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 677 (736)
+.... ...+.+++.+|++.||.+||++.+
T Consensus 258 ~~~~~----~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 258 LKPNI----TNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CCSSS----CHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCCC----CHHHHHHHHHHcccCHHhCCCCCC
Confidence 11122 235788999999999999999853
No 142
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.6e-38 Score=348.43 Aligned_cols=248 Identities=21% Similarity=0.243 Sum_probs=190.6
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhh-cCCCceeeEeeeeee----CCeEEEEEEec
Q 004689 413 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSR-IHHRNLVQFLGYCQE----EGRSVLVYEFM 486 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~----~~~~~lV~e~~ 486 (736)
.+.||+|+||+||+|... +++.||||++.. ...+.+|++++.+ .+||||+++++++.. ....++||||+
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence 368999999999999876 688999999852 3457789988754 489999999999875 56789999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEeecCCccccC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~---~~~~kl~DFGla~~~~~ 563 (736)
++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 142 ~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 142 DGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred CCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 999999999643 234589999999999999999999998 9999999999999998 78999999999986533
Q ss_pred CCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 564 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+. .+.... ..
T Consensus 217 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~~~--~~ 288 (400)
T 1nxk_A 217 HN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQYEF--PN 288 (400)
T ss_dssp ------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCCCC--CT
T ss_pred CC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCcccC--CC
Confidence 22 22345689999999999999999999999999999999999999976553222222222221 121110 00
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
..... ....+.+++..|++.||++|||+.|++++-
T Consensus 289 ~~~~~----~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 289 PEWSE----VSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp TTTTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00111 234588999999999999999999999874
No 143
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1e-39 Score=347.28 Aligned_cols=256 Identities=24% Similarity=0.379 Sum_probs=192.6
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCccc---chhhhhHHHHHhhcCCCceeeEeeeeeeCCe----EE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG---KREFTNEVTLLSRIHHRNLVQFLGYCQEEGR----SV 480 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~---~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~----~~ 480 (736)
.|.+.+.||+|+||.||+|+.. +++.||||+++...... ...+.+|+.++++++||||+++++++..... .+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 92 (311)
T 3ork_A 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92 (311)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence 3556789999999999999874 68899999997653322 3468899999999999999999999876543 49
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+++|+|.+++.. ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 99999999999999853 34689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC--cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 561 AVDGAS--HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 561 ~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~ 238 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIP 238 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCC
Confidence 543322 1223456999999999999999999999999999999999999999765421 1111111111110
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH-HHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLK-DIQDA 685 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~-~L~~~ 685 (736)
. ..... .....+.+++.+|++.||++||++.++++ .|.+.
T Consensus 239 ~---~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 239 P---SARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp H---HHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred c---ccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0 00011 12245889999999999999997666554 34433
No 144
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.1e-38 Score=334.15 Aligned_cols=250 Identities=24% Similarity=0.348 Sum_probs=200.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 87 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence 456789999999999999876 588999999865432 23456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEeecCCccccC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVD 563 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~---~kl~DFGla~~~~~ 563 (736)
++|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 88 ~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 88 TGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999988843 35688999999999999999999998 9999999999999987655 99999999976543
Q ss_pred CCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 564 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... +..+.... . .
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~----~~~~~~~~-~-~ 228 (284)
T 3kk8_A 161 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQ----IKAGAYDY-P-S 228 (284)
T ss_dssp SC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCCC-C-T
T ss_pred Cc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh----HHHHH----HHhccccC-C-c
Confidence 32 223356999999999999999999999999999999999999999765421 11111 11111110 0 0
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
..... ....+.+++..|++.||++|||+.|++++-
T Consensus 229 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 229 PEWDT----VTPEAKSLIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp TTTTT----SCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred hhhcc----cCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence 00111 224578999999999999999999998863
No 145
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-38 Score=333.45 Aligned_cols=251 Identities=28% Similarity=0.435 Sum_probs=205.0
Q ss_pred HHHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeee-------
Q 004689 404 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------- 475 (736)
Q Consensus 404 ~i~~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------- 475 (736)
+.....+.+.+.||+|+||.||+|... +++.||+|++... ...+.+|++++++++||||+++++++..
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 344456667889999999999999986 7899999998643 2467899999999999999999998854
Q ss_pred ---------CCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC
Q 004689 476 ---------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 546 (736)
Q Consensus 476 ---------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~ 546 (736)
....++||||+++|+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+|||++.
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 45579999999999999999643 234688999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHH
Q 004689 547 HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 626 (736)
Q Consensus 547 ~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~ 626 (736)
++.+||+|||++....... ......||+.|+|||++.+..++.++|||||||++|||++|..|+.... .
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~ 226 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---------K 226 (284)
T ss_dssp TTEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---------H
T ss_pred CCCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---------H
Confidence 9999999999997654432 2233468999999999999999999999999999999999998875322 1
Q ss_pred HHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 627 WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 627 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
.. .....+.+ ...++ ..+.+++.+|++.||.+||++.|++++|+.+..
T Consensus 227 ~~-~~~~~~~~--------~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 227 FF-TDLRDGII--------SDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HH-HHHHTTCC--------CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred HH-HHhhcccc--------cccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 11 11112211 11222 347889999999999999999999999998743
No 146
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.6e-38 Score=333.17 Aligned_cols=260 Identities=22% Similarity=0.325 Sum_probs=204.5
Q ss_pred HHhhccccccCceEEEEEEE-CCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeee-eeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-~~~~~~~lV~e~~~ 487 (736)
|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+|+.+++.++|++++..+.++ ......++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 45678999999999999987 478999999986543 345688999999999988876666655 5677889999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeecCCccccCC
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl---~~~~~~kl~DFGla~~~~~~ 564 (736)
+++|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 ~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 89999998532 34689999999999999999999998 99999999999999 48899999999999865443
Q ss_pred CCc------ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 565 ASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 565 ~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.......... ..
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH-
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-ch-
Confidence 321 1234569999999999999999999999999999999999999998754332222222222211111 00
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
+.+...+ ...+.+++..|++.||.+||++.+|++.|+++...
T Consensus 240 ----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 240 ----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp ----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----HHHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 0011112 24588999999999999999999999999988653
No 147
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9.5e-39 Score=338.39 Aligned_cols=250 Identities=24% Similarity=0.405 Sum_probs=201.1
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
..|.+.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 45667889999999999999876 68999999998655445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeecCCccccC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl---~~~~~~kl~DFGla~~~~~ 563 (736)
++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 89 ~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 89 SGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999998843 34688999999999999999999998 99999999999999 7789999999999875432
Q ss_pred CCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 564 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. .+.++... ...
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~----~i~~~~~~--~~~ 228 (304)
T 2jam_A 162 G---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES----KLFE----KIKEGYYE--FES 228 (304)
T ss_dssp B---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH----HHHHCCCC--CCT
T ss_pred C---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHH----HHHcCCCC--CCc
Confidence 2 223346899999999999999999999999999999999999999765421 1111 11122110 011
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..... ....+.+++..|++.||++||++.|++++
T Consensus 229 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 PFWDD----ISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTTT----SCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccc----CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11112 23458899999999999999999999875
No 148
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.8e-38 Score=336.42 Aligned_cols=256 Identities=23% Similarity=0.318 Sum_probs=195.2
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 413 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
++.||+|+||+||+|... +++.||||++..........+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 478999999999999865 6899999999766555567789999999985 79999999999999999999999999999
Q ss_pred HHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEeecCCccccCCC--
Q 004689 491 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVDGA-- 565 (736)
Q Consensus 491 L~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~---~kl~DFGla~~~~~~~-- 565 (736)
|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+|||+++......
T Consensus 98 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 98 ILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999853 34688999999999999999999998 9999999999999998776 9999999987543211
Q ss_pred ----CcceecccccccccCcccccc-----CcCCCcchhHHHHHHHHHHHhCCCcCccccccccccc-------HHHHHH
Q 004689 566 ----SHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN-------IVQWAK 629 (736)
Q Consensus 566 ----~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~-------l~~~~~ 629 (736)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||......+.... ......
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 111223459999999999975 5689999999999999999999999976542211000 001111
Q ss_pred HhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 630 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 630 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..+..+...- ...... .....+.+++.+|++.||++|||+.|++++
T Consensus 251 ~~i~~~~~~~--~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKYEF--PDKDWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCccc--Cchhcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1122221100 000000 112458899999999999999999999875
No 149
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.3e-39 Score=364.46 Aligned_cols=251 Identities=27% Similarity=0.360 Sum_probs=203.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+|++++||||+++++++.+.+..++||||
T Consensus 186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy 265 (576)
T 2acx_A 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265 (576)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence 345688999999999999886 68999999986542 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++++||+|||+++......
T Consensus 266 ~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 266 MNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred CCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999986432 33489999999999999999999998 99999999999999999999999999998654332
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+.. .. .
T Consensus 341 --~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~----~~------~-- 406 (576)
T 2acx_A 341 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----VP------E-- 406 (576)
T ss_dssp --CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH----CC------C--
T ss_pred --cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc----cc------c--
Confidence 233457999999999999999999999999999999999999999865422222222222111 11 0
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 681 (736)
.++......+.+++.+|++.||.+|| ++.||++|
T Consensus 407 --~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 407 --EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11111224588999999999999999 78898876
No 150
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.7e-39 Score=374.76 Aligned_cols=249 Identities=27% Similarity=0.412 Sum_probs=198.9
Q ss_pred ccccccCceEEEEEEEC---CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 414 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
+.||+|+||+||+|.+. .++.||||+++.... .....+.+|+++|++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999975432 234679999999999999999999999964 557899999999
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc-
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH- 567 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~- 567 (736)
|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999953 35688999999999999999999998 9999999999999999999999999999865443321
Q ss_pred -ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 568 -VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 568 -~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+.... .+. ..+..+...
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~----~~i~~~~~~------- 591 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVT----AMLEKGERM------- 591 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHH----HHHHTTCCC-------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHH----HHHHcCCCC-------
Confidence 2233457889999999999999999999999999999998 99999866521 111 122222211
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
..+......+.+++..|++.||++||++.+|++.|+++..
T Consensus 592 --~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 592 --GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1122233568899999999999999999999999998753
No 151
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.5e-39 Score=335.78 Aligned_cols=245 Identities=24% Similarity=0.397 Sum_probs=197.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||+||+|... +++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence 446789999999999999876 57789999986432 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 91 APLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 999999999843 35688999999999999999999998 9999999999999999999999999998644322
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ ... .+..... .
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~----~~~~~~~------~- 225 (279)
T 3fdn_A 163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE----TYK----RISRVEF------T- 225 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHH----HHHHTCC------C-
T ss_pred --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH----HHH----HHHhCCC------C-
Confidence 2233468999999999999999999999999999999999999997654211 111 1111110 1
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.+......+.+++.+|++.||++||+++|++++-
T Consensus 226 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 226 ---FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ---CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ---CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 1111224578899999999999999999999874
No 152
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=342.30 Aligned_cols=268 Identities=24% Similarity=0.384 Sum_probs=194.4
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHH--HhhcCCCceeeEeeeee-----eCCeEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTL--LSRIHHRNLVQFLGYCQ-----EEGRSVLV 482 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~i--l~~l~HpnIv~l~~~~~-----~~~~~~lV 482 (736)
+.+.+.||+|+||+||+|+.. ++.||||++.... ...+..|.++ +..++||||+++++++. .....++|
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 15 LKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred hheeeecccCCCeEEEEEEEC-CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 446789999999999999874 8999999986432 2334444444 55689999999998553 23367899
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCC------CCceecCCCCCCCEEEcCCCcEEEEeec
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------VPAIIHRDLKSSNILLDKHMRAKVSDFG 556 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~------~~~iiHrDikp~NILl~~~~~~kl~DFG 556 (736)
|||+++|+|.+++.. ...++..++.++.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 91 ~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp ECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 999999999999953 33578889999999999999999862 2389999999999999999999999999
Q ss_pred CCccccCCC-------CcceecccccccccCcccccc-------CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccc
Q 004689 557 LSKFAVDGA-------SHVSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 622 (736)
Q Consensus 557 la~~~~~~~-------~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~ 622 (736)
+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..|+..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998654321 112234569999999999976 456788999999999999999987764332211111
Q ss_pred -cHH---------HHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 623 -NIV---------QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 623 -~l~---------~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
.+. ...............+..... ........+.+++.+|++.||++|||+.|+++.|++++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 111 011111111111111111111 1233556799999999999999999999999999998753
No 153
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=343.91 Aligned_cols=252 Identities=18% Similarity=0.162 Sum_probs=202.9
Q ss_pred HHHhhccccccCceEEEEEE------ECCCcEEEEEEeccCCcccchhhhhHHHHHhhcC---CCceeeEeeeeeeCCeE
Q 004689 409 TKMLEKKIGSGGFGVVYYGK------LKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRS 479 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~------~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~~~~ 479 (736)
.|.+.+.||+|+||+||+|. ..+++.||||++... ...++..|++++++++ |+||+++++++...+..
T Consensus 66 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp EEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred EEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 34567899999999999994 446889999998643 3456788888888886 99999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-----------C
Q 004689 480 VLVYEFMHNGTLKEHLYGTLT-HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----------H 547 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~-----------~ 547 (736)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++. +
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------C
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccccc
Confidence 999999999999999964322 245699999999999999999999998 9999999999999998 8
Q ss_pred CcEEEEeecCCccccC-CCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHH
Q 004689 548 MRAKVSDFGLSKFAVD-GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 626 (736)
Q Consensus 548 ~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~ 626 (736)
+.+||+|||+|+.... .........+||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------ 293 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------ 293 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE------
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce------
Confidence 9999999999975432 223334556799999999999999999999999999999999999999965432100
Q ss_pred HHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCC-CCHHHHHHHHHHHHHH
Q 004689 627 WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR-PSISEVLKDIQDAIVI 688 (736)
Q Consensus 627 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R-Pt~~ev~~~L~~~~~~ 688 (736)
.++..+..... ...+.+++..|++.+|.+| |++.++.+.|++++..
T Consensus 294 -------------~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 -------------KPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -------------EECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -------------eechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 01111111111 2346678889999999988 5889999999988754
No 154
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.3e-39 Score=360.40 Aligned_cols=245 Identities=24% Similarity=0.407 Sum_probs=201.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||.||+|++. +|+.||||++..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~ 97 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 456789999999999999986 799999999865422 2245688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 98 VSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp CSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999853 45689999999999999999999998 99999999999999999999999999998654432
Q ss_pred CcceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+.... .+.. .+..+...
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~----~i~~~~~~------ 234 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----TLFK----KICDGIFY------ 234 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH----HHHH----HHHTTCCC------
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH----HHHH----HHhcCCcC------
Confidence 2334579999999999988765 67999999999999999999999865422 1111 11112110
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..... ...+.+++.+|++.||.+|||+.|++++
T Consensus 235 ~p~~~----s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 TPQYL----NPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCTTC----CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCccC----CHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 01111 2357899999999999999999999975
No 155
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5e-39 Score=335.37 Aligned_cols=244 Identities=23% Similarity=0.393 Sum_probs=178.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 445688999999999999865 689999999875432 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 95 A-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp C-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred c-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9 6788887743 34589999999999999999999998 99999999999999999999999999997654332
Q ss_pred CcceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||....... +.. .+..+.. .
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~----~~~~~~~------~ 230 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFK----NISNGVY------T 230 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH----HHHHTCC------C
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH----HHH----HHHhCCC------C
Confidence 2233468999999999987765 689999999999999999999997654211 111 1111111 0
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+... ....+.+++.+|++.||.+|||+.|++++
T Consensus 231 ~~~~----~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 LPKF----LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCTT----SCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCcc----CCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1111 22357899999999999999999999875
No 156
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=345.44 Aligned_cols=263 Identities=19% Similarity=0.214 Sum_probs=196.1
Q ss_pred HHHHhhccccccCceEEEEEEEC----CCcEEEEEEeccCCcc-----------cchhhhhHHHHHhhcCCCceeeEeee
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQ-----------GKREFTNEVTLLSRIHHRNLVQFLGY 472 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~~~-----------~~~~~~~E~~il~~l~HpnIv~l~~~ 472 (736)
..|.+.+.||+|+||+||+|... ++..+|||++...... ....+.+|+.+++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 44567889999999999999986 5788999998754321 12346678889999999999999999
Q ss_pred eee----CCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC
Q 004689 473 CQE----EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 548 (736)
Q Consensus 473 ~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~ 548 (736)
+.. ....++||||+ +++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 987 67899999999 9999999853 33789999999999999999999998 999999999999999887
Q ss_pred --cEEEEeecCCccccCCCC------cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccc
Q 004689 549 --RAKVSDFGLSKFAVDGAS------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 620 (736)
Q Consensus 549 --~~kl~DFGla~~~~~~~~------~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~ 620 (736)
.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~- 267 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP- 267 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-
Confidence 999999999976532211 11234569999999999999999999999999999999999999996532111
Q ss_pred cccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 004689 621 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 685 (736)
Q Consensus 621 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 685 (736)
..+ ......... .+...+...... ......+.+++..|++.||++||++.+|++.|+..
T Consensus 268 -~~~-~~~~~~~~~-~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 268 -VAV-QTAKTNLLD-ELPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp -HHH-HHHHHHHHH-TTTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred -HHH-HHHHHhhcc-cccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 111 111111111 111111110000 01234688999999999999999999999999864
No 157
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-38 Score=334.25 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=200.2
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc------cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
..|.+.+.||+|+||.||+|+.. +++.||+|++...... ....+.+|+.++++++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45667889999999999999987 6899999998754321 2456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC----cEEEEeec
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 556 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~----~~kl~DFG 556 (736)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999843 35689999999999999999999998 999999999999998877 89999999
Q ss_pred CCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 557 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 557 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .... . +....
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~---~-~~~~~ 227 (283)
T 3bhy_A 158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ----ETLT---N-ISAVN 227 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHH---H-HHTTC
T ss_pred cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH----HHHH---H-hHhcc
Confidence 997654322 223346899999999999899999999999999999999999999765421 1111 1 11111
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. .++.... .....+.+++.+|++.||++||++.|++++
T Consensus 228 ~~--~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 228 YD--FDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CC--CCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred cC--Ccchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 00 0000111 112458899999999999999999999986
No 158
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=344.19 Aligned_cols=262 Identities=14% Similarity=0.202 Sum_probs=204.4
Q ss_pred HHHhhccccccCceEEEEEEECC---------CcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceee-----------
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQ----------- 468 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~---------~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~----------- 468 (736)
.|.+.+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 45567899999999999998763 789999998643 46889999999999999998
Q ss_pred ----Eeeeeee-CCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEE
Q 004689 469 ----FLGYCQE-EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 543 (736)
Q Consensus 469 ----l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NIL 543 (736)
+++++.. ....++||||+ +++|.+++... ....+++..++.++.|++.||.|||++ +|+||||||+|||
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 5667765 67889999999 99999999643 235689999999999999999999998 9999999999999
Q ss_pred EcCCC--cEEEEeecCCccccCCCCc------ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccc
Q 004689 544 LDKHM--RAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 615 (736)
Q Consensus 544 l~~~~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~ 615 (736)
++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999765432211 123347999999999999989999999999999999999999999865
Q ss_pred ccccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 616 KFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 616 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
... ...+......... ....+.+..... ......+.+++..|++.||++||++.||++.|++++..
T Consensus 272 ~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 272 LPN--TEDIMKQKQKFVD--KPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TTC--HHHHHHHHHHHHH--SCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcC--HHHHHHHHHhccC--Chhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 411 1122222222111 112222211111 01124588999999999999999999999999998654
No 159
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.2e-39 Score=341.16 Aligned_cols=261 Identities=27% Similarity=0.407 Sum_probs=196.9
Q ss_pred HHHHhhccccccCceEEEEEEEC----CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCC----
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG---- 477 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 477 (736)
..+.+.+.||+|+||.||+|... ++..||||+++.... .....+.+|+.++++++||||+++++++....
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 34556789999999999999765 345899999875432 23456889999999999999999999997655
Q ss_pred -eEEEEEEecCCCCHHHHhhccc--ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 004689 478 -RSVLVYEFMHNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 554 (736)
Q Consensus 478 -~~~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~D 554 (736)
..++||||+++|+|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEee
Confidence 3599999999999999985332 2345689999999999999999999998 999999999999999999999999
Q ss_pred ecCCccccCCCC-cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhh
Q 004689 555 FGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 555 FGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.....
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~~--- 263 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----EMYDYLL--- 263 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHH---
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHHHHHH---
Confidence 999976543322 12233457889999999999999999999999999999999 88999765422 2222111
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
.+... . .+......+.+++..|++.+|.+||++.+++++|++++..
T Consensus 264 -~~~~~-----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 264 -HGHRL-----K----QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp -TTCCC-----C----CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cCCCC-----C----CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11110 0 1112234588999999999999999999999999998653
No 160
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=340.22 Aligned_cols=264 Identities=27% Similarity=0.398 Sum_probs=206.9
Q ss_pred HHHhhccccccCceEEEEEEE-----CCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCC--eEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~l 481 (736)
.+.+.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..++
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 121 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEE
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEE
Confidence 345678999999999999984 368899999998665555677999999999999999999999987544 7899
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 122 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 122 IMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 99999999999999643 34588999999999999999999998 9999999999999999999999999999866
Q ss_pred cCCCCcc--eecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccc--------cccccHHHHHHHh
Q 004689 562 VDGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG--------ANCRNIVQWAKLH 631 (736)
Q Consensus 562 ~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~--------~~~~~l~~~~~~~ 631 (736)
....... .....++..|+|||.+.+..++.++|||||||++|||++|..|+...... .............
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 4433221 22345788899999999888999999999999999999999988643200 0000111111122
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
+..+.. ...+......+.+++.+|++.||++||++.||++.|+.+..
T Consensus 276 ~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 276 LKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 221111 01112223468899999999999999999999999998854
No 161
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.9e-39 Score=345.50 Aligned_cols=246 Identities=24% Similarity=0.369 Sum_probs=197.4
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc---cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
.+.+.+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 3455688999999999999874 7899999998754322 23568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+. |+|.+++.. ....+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 ~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 135 YCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp CCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred cCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 997 688887743 235688999999999999999999998 9999999999999999999999999999765322
Q ss_pred CCcceecccccccccCccccc---cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceec
Q 004689 565 ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 641 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 641 (736)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .......... .....
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-------~~~~~~~~~~-~~~~~ 274 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNE-SPALQ 274 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSC-CCCCC
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHHhcC-CCCCC
Confidence 2346999999999985 567899999999999999999999999755421 1111111111 11111
Q ss_pred cCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 642 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 642 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
...+ ...+.+++..|++.||++|||+.|++++.
T Consensus 275 ----~~~~----~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 275 ----SGHW----SEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp ----CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred ----CCCC----CHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 1111 23578899999999999999999998763
No 162
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.4e-39 Score=335.09 Aligned_cols=250 Identities=30% Similarity=0.449 Sum_probs=196.4
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeC-CeEEEEEEecC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-GRSVLVYEFMH 487 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-~~~~lV~e~~~ 487 (736)
.+.+.+.||+|+||+||+|... ++.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||++
T Consensus 22 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 22 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 3456789999999999999886 8999999986443 356788999999999999999999987544 57899999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
+|+|.+++... ....+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 99 KGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp TEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 99999998532 123478889999999999999999998 9999999999999999999999999998754322
Q ss_pred ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccC
Q 004689 568 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 646 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 646 (736)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+.. ...
T Consensus 171 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~~----~~~~~~-----~~~- 235 (278)
T 1byg_A 171 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPR----VEKGYK-----MDA- 235 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----GHHHH----HTTTCC-----CCC-
T ss_pred -ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HhcCCC-----CCC-
Confidence 123357899999999998899999999999999999998 99999765422 22221 111110 111
Q ss_pred CcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 647 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 647 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
+......+.+++..|++.||++||++.|+++.|+++..
T Consensus 236 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 236 ---PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 11223468899999999999999999999999998754
No 163
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=333.05 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=179.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence 445788999999999999874 789999999864421 2235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 93 CHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred CCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999998642 34688999999999999999999998 99999999999999999999999999997653322
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... .. ... +...
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~~-~~~------~~~~ 231 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN-------KV-VLA------DYEM 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------C-CSS------CCCC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH-------HH-hhc------ccCC
Confidence 1 2233568999999999998889999999999999999999999997654221110 00 000 0011
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... ....+.+++.+|++.||++||++.|++++
T Consensus 232 ~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 232 PSF----LSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CTT----SCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccc----cCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 111 22457899999999999999999999874
No 164
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.1e-39 Score=344.72 Aligned_cols=263 Identities=19% Similarity=0.233 Sum_probs=190.4
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
.|.+.+.||+|+||+||+|... +++.||||+++..... ....+.+|+.++++++||||+++++++...+..++||||
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence 3556789999999999999865 6889999998754322 245678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-----CCCcEEEEeecCCcc
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-----KHMRAKVSDFGLSKF 560 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~-----~~~~~kl~DFGla~~ 560 (736)
+++ +|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 ~~~-~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 115 AEN-DLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp CSE-EHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred CCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 984 99998853 34588999999999999999999998 999999999999994 555699999999976
Q ss_pred ccCCCCcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcce
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 639 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 639 (736)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+..... .........
T Consensus 187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~ 264 (329)
T 3gbz_A 187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLG-LPDDTTWPG 264 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-CCCTTTSTT
T ss_pred cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhC-CCchhhhhh
Confidence 543222 22344689999999999874 589999999999999999999999976542211111111000 000000000
Q ss_pred ec-----c---CccCCc-----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 640 II-----D---PSLLDE-----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 640 ~~-----d---~~l~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. . +..... ........+.+++.+|++.||++|||+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00 0 000000 001122467899999999999999999999864
No 165
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-40 Score=350.32 Aligned_cols=257 Identities=23% Similarity=0.410 Sum_probs=185.2
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhh--cCCCceeeEeeeeeeCC----eEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG----RSVLVY 483 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~--l~HpnIv~l~~~~~~~~----~~~lV~ 483 (736)
+.+.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 80 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence 456789999999999999876 899999998643 34567778888887 79999999999998876 789999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCceecCCCCCCCEEEcCCCcEEEEee
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSDF 555 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH--------~~~~~~iiHrDikp~NILl~~~~~~kl~DF 555 (736)
||+++|+|.+++.. ..+++..++.++.|++.||.||| +. +|+||||||+|||++.++.+||+||
T Consensus 81 e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 81 DYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp ECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred eccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999943 35777888999999999999999 66 9999999999999999999999999
Q ss_pred cCCccccCCCCcc---eecccccccccCccccccC------cCCCcchhHHHHHHHHHHHhC----------CCcCcccc
Q 004689 556 GLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNEK 616 (736)
Q Consensus 556 Gla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~~~~~DVwSlGvvl~elltG----------~~p~~~~~ 616 (736)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654433221 2334699999999999775 445689999999999999999 55654432
Q ss_pred ccc-ccccHHHHHHHhhhcCCcceeccCccCCcC-CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 004689 617 FGA-NCRNIVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 686 (736)
Q Consensus 617 ~~~-~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 686 (736)
... ....+... ..... ..+.....+ ..+....+.+++.+|++.||++|||+.||++.|+++.
T Consensus 233 ~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 233 PSDPSVEEMRKV----VCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp C-CCCCC-CHHH----HTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred CCCccHHHHHHH----HHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 111 11111111 11111 111111111 2356678999999999999999999999999998774
No 166
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.5e-38 Score=340.67 Aligned_cols=261 Identities=21% Similarity=0.283 Sum_probs=202.7
Q ss_pred cCHHHHHHHHHHhh-ccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhc-CCCceeeEeeeee
Q 004689 400 FTLSDIEDATKMLE-KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI-HHRNLVQFLGYCQ 474 (736)
Q Consensus 400 ~~~~~i~~~~~~~~-~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 474 (736)
+...+.....|.+. +.||+|+||+||+|... +++.||||++..... .....+.+|+.+++++ +||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33344444555554 88999999999999876 689999999875432 2346788999999999 5699999999999
Q ss_pred eCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEE
Q 004689 475 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAK 551 (736)
Q Consensus 475 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~---~~~~k 551 (736)
..+..++||||+.+|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+|
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 999999999999999999988542 235689999999999999999999998 9999999999999998 78999
Q ss_pred EEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHh
Q 004689 552 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 631 (736)
Q Consensus 552 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~ 631 (736)
|+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .....
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~-- 246 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET----YLNIS-- 246 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHH--
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH----HHHHH--
Confidence 99999998654322 22335699999999999999999999999999999999999999976542111 11111
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..... ... .........+.+++..|++.||++|||++|++++
T Consensus 247 --~~~~~--~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 247 --QVNVD--YSE----ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp --HTCCC--CCT----TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --hcccc--cCc----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11100 001 1111223458899999999999999999999876
No 167
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1e-38 Score=334.33 Aligned_cols=246 Identities=19% Similarity=0.300 Sum_probs=197.7
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
..|.+.+.||+|+||+||+|... +++.||||++.... ......+.+|+..+.++ +||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 45566789999999999999886 78999999987542 23356788899999999 9999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC----------------
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---------------- 547 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~---------------- 547 (736)
||+++|+|.+++.........+++..++.++.|++.||.|||++ +|+||||||+|||++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 99999999999965433335689999999999999999999998 99999999999999844
Q ss_pred ---CcEEEEeecCCccccCCCCcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCccccccccccc
Q 004689 548 ---MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 623 (736)
Q Consensus 548 ---~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~ 623 (736)
..+||+|||++....... ...||+.|+|||++.+. .++.++|||||||++|||++|..++.... .
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~ 236 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------Q 236 (289)
T ss_dssp --CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------H
T ss_pred CCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------H
Confidence 479999999997654322 23489999999999865 56689999999999999999987764332 0
Q ss_pred HHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 624 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 624 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
. ..+..+... .+...+ ...+.+++.+|++.||++|||+.|++++
T Consensus 237 ~-----~~~~~~~~~-----~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 W-----HEIRQGRLP-----RIPQVL----SQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp H-----HHHHTTCCC-----CCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred H-----HHHHcCCCC-----CCCccc----CHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1 111222221 111222 2458899999999999999999999875
No 168
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-38 Score=358.04 Aligned_cols=261 Identities=21% Similarity=0.290 Sum_probs=192.5
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccC--CcccchhhhhHHHHHhhcCCCceeeEeeeeeeC------CeE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 479 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------~~~ 479 (736)
.|.+.+.||+|+||+||+|... +++.||||++... .......+.+|+.+|+.++||||+++++++... ...
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 3556789999999999999876 6889999999754 223356688999999999999999999999654 457
Q ss_pred EEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
++||||++++ |.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 143 ~lv~E~~~~~-l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 143 YLVMELMDAN-LCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEECCSEE-HHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred EEEEeCCCCC-HHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 9999999864 666653 2378888999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHH-----------
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA----------- 628 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~----------- 628 (736)
..... .......||+.|+|||++.+..|+.++|||||||++|||++|+.||.+....+....+.+..
T Consensus 213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 213 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp ----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred ecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 65432 22344579999999999999999999999999999999999999998654221111111110
Q ss_pred ----HHhhhc-CC-----cceeccCccCCcC---CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 629 ----KLHIES-GD-----IQGIIDPSLLDEY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 629 ----~~~~~~-~~-----~~~~~d~~l~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
...... .. +...+...+.... .......+.+++.+|+..||++|||++|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 00 0000000000000 01124568999999999999999999999876
No 169
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-39 Score=354.39 Aligned_cols=260 Identities=24% Similarity=0.361 Sum_probs=187.3
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcC-CCceeeEeeeeeeCC--eEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEG--RSVLV 482 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~--~~~lV 482 (736)
.|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++++. ||||+++++++...+ ..++|
T Consensus 10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv 89 (388)
T 3oz6_A 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89 (388)
T ss_dssp TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence 4556789999999999999875 68999999986432 223456778999999997 999999999997544 78999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
||||+ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 90 FDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred ecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99998 589888853 4588889999999999999999998 99999999999999999999999999997543
Q ss_pred CC--------------------CCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCccccccccc
Q 004689 563 DG--------------------ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 621 (736)
Q Consensus 563 ~~--------------------~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~ 621 (736)
.. ........+||++|+|||++.+ ..++.++|||||||++|||++|+.||.+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 1112234579999999999986 67899999999999999999999999865422211
Q ss_pred ccHHHHHHHhhhcCCccee---c------------------cCccCCcC------------CHHHHHHHHHHHhhccCCC
Q 004689 622 RNIVQWAKLHIESGDIQGI---I------------------DPSLLDEY------------DIQSMWKIEEKALMCVLPH 668 (736)
Q Consensus 622 ~~l~~~~~~~~~~~~~~~~---~------------------d~~l~~~~------------~~~~~~~l~~l~~~cl~~d 668 (736)
..+.. .+.......+ - .......+ .......+.+++.+|++.|
T Consensus 241 ~~i~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 241 ERIIG----VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHH----HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHH----hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 11111 1100000000 0 00000000 0011245889999999999
Q ss_pred CCCCCCHHHHHHH
Q 004689 669 GHMRPSISEVLKD 681 (736)
Q Consensus 669 P~~RPt~~ev~~~ 681 (736)
|++|||+.|+++|
T Consensus 317 P~~R~t~~e~l~H 329 (388)
T 3oz6_A 317 PNKRISANDALKH 329 (388)
T ss_dssp GGGSCCHHHHTTS
T ss_pred cccCCCHHHHhCC
Confidence 9999999999877
No 170
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.3e-39 Score=344.65 Aligned_cols=260 Identities=23% Similarity=0.409 Sum_probs=206.8
Q ss_pred HHHHhhccccccCceEEEEEEEC------CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 480 (736)
..+.+.+.||+|+||.||+|.+. +++.||||++..... .....+.+|+.++++++||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 104 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence 34566789999999999999764 367899999875432 23456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccc------cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 004689 481 LVYEFMHNGTLKEHLYGTLT------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 554 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~D 554 (736)
+||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~D 181 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 181 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECC
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECc
Confidence 99999999999999864321 113468889999999999999999998 999999999999999999999999
Q ss_pred ecCCccccCCCC-cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhh
Q 004689 555 FGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 555 FGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||...... .+.. .+
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~----~~ 253 (322)
T 1p4o_A 182 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVLR----FV 253 (322)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH----HHHH----HH
T ss_pred CccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH----HHHH----HH
Confidence 999975533221 12223457899999999998899999999999999999999 88998765421 1111 11
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
..+.... ........+.+++.+|++.||.+||++.|++++|++.+.
T Consensus 254 ~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 MEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1222111 111223458899999999999999999999999987644
No 171
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=344.51 Aligned_cols=260 Identities=22% Similarity=0.307 Sum_probs=193.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc-cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
|.+.+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 345688999999999999886 6899999998754322 23467789999999999999999999999999999999998
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 84 -~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~ 155 (324)
T 3mtl_A 84 -KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-K 155 (324)
T ss_dssp -EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred -cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-c
Confidence 5888888542 34588899999999999999999998 99999999999999999999999999997543322 2
Q ss_pred ceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcC---CcceeccC
Q 004689 568 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG---DIQGIIDP 643 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~d~ 643 (736)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+....... ........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE----QLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGGGC
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHhchhhhcc
Confidence 2234468999999999876 568999999999999999999999998755322 122221111110 00000000
Q ss_pred ---------ccCCc----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 644 ---------SLLDE----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 644 ---------~l~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..... ........+.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 001122457899999999999999999999875
No 172
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.9e-39 Score=337.63 Aligned_cols=253 Identities=24% Similarity=0.344 Sum_probs=201.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeee--eCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~--~~~~~~lV~e 484 (736)
|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++. .....++|||
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 445789999999999999886 689999999875432 23456889999999999999999999885 4678899999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCc-----eecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA-----IIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~-----iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
|+++|+|.+++.........+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 9999999999965433344589999999999999999999998 6 9999999999999999999999999987
Q ss_pred cccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcce
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 639 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 639 (736)
....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+.. .+..+....
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~i~~~~~~~ 235 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----ELAG----KIREGKFRR 235 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHTCCCC
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH----HHHH----HHhhccccc
Confidence 6543221 223346899999999999889999999999999999999999999765421 1211 122222211
Q ss_pred eccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 004689 640 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 683 (736)
Q Consensus 640 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 683 (736)
+... ....+.+++.+|++.||++||++.||++++.
T Consensus 236 -----~~~~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 -----IPYR----YSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----CCcc----cCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 1112 2345889999999999999999999998764
No 173
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.7e-38 Score=331.17 Aligned_cols=252 Identities=22% Similarity=0.362 Sum_probs=201.5
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
..|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 34566789999999999999886 68999999986443 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++++|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 87 CSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp CTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred cCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 99999999884 335688999999999999999999998 99999999999999999999999999997543222
Q ss_pred -CcceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 566 -SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 566 -~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
........||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...... ...+..|... ... ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~----~~~---~~- 229 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWKEK----KTY---LN- 229 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT--SHHHHHHHTT----CTT---ST-
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHhhhc----ccc---cC-
Confidence 122334568999999999987665 67899999999999999999999765421 1112222111 000 00
Q ss_pred ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 644 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 644 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. ......+.+++..|++.||++|||+.|++++
T Consensus 230 -~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 -PW----KKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -TG----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -ch----hhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 00 1122357889999999999999999999764
No 174
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.5e-39 Score=351.91 Aligned_cols=263 Identities=20% Similarity=0.232 Sum_probs=197.3
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeee------------
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------------ 475 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------------ 475 (736)
.|.+.+.||+|+||+||+|+.. +|+.||||++... .....+|+++|+.++||||+++++++..
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD----PRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECC----TTSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 3556789999999999999874 7899999998643 3345689999999999999999999843
Q ss_pred --------------------------CCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCC
Q 004689 476 --------------------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV 529 (736)
Q Consensus 476 --------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~ 529 (736)
....++||||++ |+|.+.+.........+++..+..++.|+++||.|||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 160 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-- 160 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 334789999998 588888866555567799999999999999999999998
Q ss_pred CceecCCCCCCCEEEc-CCCcEEEEeecCCccccCCCCcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHh
Q 004689 530 PAIIHRDLKSSNILLD-KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELIS 607 (736)
Q Consensus 530 ~~iiHrDikp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~ellt 607 (736)
+|+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++|||++
T Consensus 161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp -TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred -cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 999999999999998 689999999999986543322 2334689999999998864 58999999999999999999
Q ss_pred CCCcCcccccccccccHHHHHH--------Hhh---hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 004689 608 GQEAISNEKFGANCRNIVQWAK--------LHI---ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSIS 676 (736)
Q Consensus 608 G~~p~~~~~~~~~~~~l~~~~~--------~~~---~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 676 (736)
|+.||.+....+....++.... ..- .+..+...........++......+.+++.+|++.||++|||+.
T Consensus 238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 317 (383)
T 3eb0_A 238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY 317 (383)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 9999986553222112211100 000 00000000000000111222334588999999999999999999
Q ss_pred HHHHH
Q 004689 677 EVLKD 681 (736)
Q Consensus 677 ev~~~ 681 (736)
|++++
T Consensus 318 e~l~h 322 (383)
T 3eb0_A 318 EAMAH 322 (383)
T ss_dssp HHHTS
T ss_pred HHhcC
Confidence 99976
No 175
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.4e-38 Score=343.61 Aligned_cols=263 Identities=23% Similarity=0.282 Sum_probs=200.0
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcC-----CCceeeEeeeeeeCCeEE
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----HRNLVQFLGYCQEEGRSV 480 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-----HpnIv~l~~~~~~~~~~~ 480 (736)
...|.+.++||+|+||+||+|+.. +++.||||+++.. ......+..|+.+++.++ ||||+++++++...+..+
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 345667889999999999999885 6889999998642 233456778999999996 999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--------------
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------------- 546 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~-------------- 546 (736)
+||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 113 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred EEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccc
Confidence 999999 899999986432 23588999999999999999999998 9999999999999975
Q ss_pred -----------CCcEEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccc
Q 004689 547 -----------HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 615 (736)
Q Consensus 547 -----------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~ 615 (736)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 789999999999864332 23456899999999999999999999999999999999999999765
Q ss_pred ccccccccHHHH--------HHHhhhcCCcceeccC-ccC----CcC-CH---------------HHHHHHHHHHhhccC
Q 004689 616 KFGANCRNIVQW--------AKLHIESGDIQGIIDP-SLL----DEY-DI---------------QSMWKIEEKALMCVL 666 (736)
Q Consensus 616 ~~~~~~~~l~~~--------~~~~~~~~~~~~~~d~-~l~----~~~-~~---------------~~~~~l~~l~~~cl~ 666 (736)
...+....+... ........ ....++. .+. ... .. .....+.+++..|++
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 341 (360)
T 3llt_A 263 EHMEHLAMMESIIQPIPKNMLYEATKTN-GSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ 341 (360)
T ss_dssp SHHHHHHHHHHHTCCCCHHHHHHHTTSG-GGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHhcCCCCHHHHhhhhhcc-CccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc
Confidence 422111111110 00000000 0000000 000 000 00 011457799999999
Q ss_pred CCCCCCCCHHHHHHH
Q 004689 667 PHGHMRPSISEVLKD 681 (736)
Q Consensus 667 ~dP~~RPt~~ev~~~ 681 (736)
.||++|||+.|++++
T Consensus 342 ~dP~~Rpta~elL~h 356 (360)
T 3llt_A 342 IDPTLRPSPAELLKH 356 (360)
T ss_dssp SSGGGSCCHHHHTTS
T ss_pred CChhhCCCHHHHhcC
Confidence 999999999999864
No 176
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6.2e-39 Score=344.26 Aligned_cols=264 Identities=22% Similarity=0.338 Sum_probs=198.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 106 (331)
T 4aaa_A 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106 (331)
T ss_dssp EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecC
Confidence 456789999999999999886 5899999998654322 2455789999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++++|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 ~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 107 DHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp SEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 9999988763 234589999999999999999999998 99999999999999999999999999997654322
Q ss_pred cceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHH-------HHhh-hcCCc
Q 004689 567 HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------KLHI-ESGDI 637 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~-------~~~~-~~~~~ 637 (736)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+.... .... .....
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 222345689999999999875 78999999999999999999999997655322111111100 0000 00001
Q ss_pred ceeccCccCCcCC-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 638 QGIIDPSLLDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 638 ~~~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.....+.+..... ......+.+++.+|++.||++|||+.|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111111111111 1223568899999999999999999999886
No 177
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.4e-38 Score=349.72 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=190.0
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--------ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCe
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 478 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--------~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 478 (736)
..|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|+.+|++++||||+++++++.. +.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence 34567889999999999999876 578999999865321 123458899999999999999999999854 55
Q ss_pred EEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC---CcEEEEee
Q 004689 479 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDF 555 (736)
Q Consensus 479 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~---~~~kl~DF 555 (736)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 214 ~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp EEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred eEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 799999999999998884 345689999999999999999999998 99999999999999754 45999999
Q ss_pred cCCccccCCCCcceecccccccccCcccccc---CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhh
Q 004689 556 GLSKFAVDGASHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 556 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
|+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+....
T Consensus 287 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~---~~~~~~i---- 357 (419)
T 3i6u_A 287 GHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VSLKDQI---- 357 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS---CCHHHHH----
T ss_pred ccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch---HHHHHHH----
Confidence 999865432 22344679999999999863 56788999999999999999999999764421 1222211
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..+.... .+.... .....+.+++.+|++.||++||++.|++++
T Consensus 358 ~~~~~~~--~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 TSGKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HTTCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcCCCCC--Cchhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1111110 000011 123458899999999999999999999886
No 178
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.3e-38 Score=329.63 Aligned_cols=246 Identities=28% Similarity=0.412 Sum_probs=195.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeee----CCeEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLV 482 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----~~~~~lV 482 (736)
+.+.+.||+|+||+||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 345678999999999999875 67889999987542 2234568899999999999999999998865 3568999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEc-CCCcEEEEeecCCc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLD-KHMRAKVSDFGLSK 559 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--iiHrDikp~NILl~-~~~~~kl~DFGla~ 559 (736)
|||+++|+|.+++.. ...+++..++.++.|++.||.|||+. + |+||||||+|||++ .++.+||+|||++.
T Consensus 108 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 108 TELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999953 35688999999999999999999998 7 99999999999998 78999999999997
Q ss_pred cccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcce
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 639 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 639 (736)
..... ......||+.|+|||++. +.++.++|||||||++|||++|+.||..... ........ ..+....
T Consensus 181 ~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~-~~~~~~~ 249 (290)
T 1t4h_A 181 LKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRV-TSGVKPA 249 (290)
T ss_dssp GCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHH-TTTCCCG
T ss_pred ccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc------HHHHHHHH-hccCCcc
Confidence 54332 223456999999999876 4589999999999999999999999975431 11111111 1111111
Q ss_pred eccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 640 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 640 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. +......+.+++..|++.||.+|||+.|++++
T Consensus 250 ~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 SF--------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GG--------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cc--------CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11 11112358899999999999999999999875
No 179
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.8e-38 Score=334.50 Aligned_cols=247 Identities=21% Similarity=0.338 Sum_probs=201.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence 445789999999999999887 578899999865422 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 97 CRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp CTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 999999998742 35688999999999999999999998 99999999999999999999999999997654322
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ . .. .+..+.. .+
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~---~~-~~~~~~~------~~ 234 (294)
T 2rku_A 170 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----T---YL-RIKKNEY------SI 234 (294)
T ss_dssp C-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----H---HH-HHHTTCC------CC
T ss_pred c-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----H---HH-HHhhccC------CC
Confidence 2 2234568999999999999889999999999999999999999997654211 1 11 1111111 11
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.... ...+.+++.+|++.||++||++.|++++-
T Consensus 235 ~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 235 PKHI----NPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp CTTS----CHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred cccc----CHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 1112 23578899999999999999999998863
No 180
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.2e-38 Score=353.53 Aligned_cols=259 Identities=24% Similarity=0.282 Sum_probs=194.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeC------CeEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSVLV 482 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------~~~~lV 482 (736)
|.+.+.||+|+||+||+|++. +++.||||++... .....+|+++|++++||||+++++++... ...++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----chhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 445788999999999999986 5899999998643 23456899999999999999999988532 236799
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC-CcEEEEeecCCccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFA 561 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~-~~~kl~DFGla~~~ 561 (736)
|||+++ +|.+.+.........+++..+..++.|+++||.|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 66666654333456789999999999999999999998 99999999999999965 67899999999865
Q ss_pred cCCCCcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHh-------hh
Q 004689 562 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------IE 633 (736)
Q Consensus 562 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~-------~~ 633 (736)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+...++.. +.
T Consensus 208 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~---~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 208 VRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD---QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHHHHH
T ss_pred ccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHH
Confidence 43322 2334689999999999764 79999999999999999999999998754222 222222110 00
Q ss_pred --cCCcceeccCccCC-----cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 634 --SGDIQGIIDPSLLD-----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 634 --~~~~~~~~d~~l~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.....+..-+.+.. .+.......+.+|+.+|++.||.+||++.|++++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 01111111111111 0111223568899999999999999999999876
No 181
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=342.56 Aligned_cols=266 Identities=21% Similarity=0.219 Sum_probs=196.7
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc-----cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-----GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 481 (736)
..|.+.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 34566789999999999999876 5899999998753221 13467899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
||||+++ +|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 90 v~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999986 888887532 34578888999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc--
Q 004689 562 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ-- 638 (736)
Q Consensus 562 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~-- 638 (736)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|..||.+....+....+....... ......
T Consensus 163 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~ 240 (346)
T 1ua2_A 163 GSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP-TEEQWPDM 240 (346)
T ss_dssp TSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC-CTTTSSST
T ss_pred cCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCC-Chhhhhhh
Confidence 4332 223345689999999999764 58889999999999999999999997654221111111110000 000000
Q ss_pred ----eeccCccCCcCC-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 639 ----GIIDPSLLDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 639 ----~~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
+.+........+ ......+.+++.+|++.||++|||+.|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000000000001 11235689999999999999999999998763
No 182
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.4e-38 Score=339.19 Aligned_cols=247 Identities=21% Similarity=0.336 Sum_probs=201.7
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
.|.+.+.||+|+||.||++... +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 121 (335)
T 2owb_A 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence 3456789999999999999886 57889999986542 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+.+++|.+++.. ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 122 ~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 122 LCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp CCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred cCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 9999999998743 35688999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ... . +..+.. .
T Consensus 195 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~---~-~~~~~~------~ 259 (335)
T 2owb_A 195 GE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYL---R-IKKNEY------S 259 (335)
T ss_dssp TC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHH---H-HHHTCC------C
T ss_pred cc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH----HHH---H-HhcCCC------C
Confidence 22 2234569999999999999899999999999999999999999997654211 111 1 111111 1
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+.... ...+.+++.+|++.||++||++.|++++
T Consensus 260 ~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 IPKHI----NPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CCTTS----CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCccC----CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11122 2357889999999999999999999876
No 183
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-38 Score=341.24 Aligned_cols=262 Identities=26% Similarity=0.401 Sum_probs=203.8
Q ss_pred HHHHHhhccccccCceEEEEEEEC------CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeE
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 479 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 479 (736)
...+.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.++++++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 345567889999999999999842 57789999986442 23456788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccc---cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEE
Q 004689 480 VLVYEFMHNGTLKEHLYGTLT---HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVS 553 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~---~~~~kl~ 553 (736)
++||||+++|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999965432 124588999999999999999999998 9999999999999994 4569999
Q ss_pred eecCCccccCCCC-cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHh
Q 004689 554 DFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 631 (736)
Q Consensus 554 DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~ 631 (736)
|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||...... .+...+
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~--- 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFV--- 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHH---
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH----HHHHHH---
Confidence 9999875433222 22234458999999999998899999999999999999998 99999755421 122211
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
..+... ..+......+.+++..|++.||.+||++.||+++|+.+...
T Consensus 259 -~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 259 -TSGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -hcCCCC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111111 01112234588999999999999999999999999987553
No 184
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5e-38 Score=355.99 Aligned_cols=251 Identities=26% Similarity=0.393 Sum_probs=198.2
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
...|.+.+.||+|+||+||+|+.. ++..||||++.... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 345677899999999999999986 68899999987653 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC---CcEEEEeecCCcc
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKF 560 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~---~~~kl~DFGla~~ 560 (736)
||+.+|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.. +.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999998843 35688999999999999999999998 99999999999999764 5599999999986
Q ss_pred ccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
..... ......||+.|+|||++. ..++.++||||+||++|||++|..||.+.... .+... +..+...
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~----i~~~~~~-- 255 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ----EILRK----VEKGKYT-- 255 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCC--
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----HHhCCCC--
Confidence 54332 233456999999999876 56999999999999999999999999865421 12221 1112111
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
++....... ...+.+++.+|++.||.+|||+.|++++
T Consensus 256 ~~~~~~~~~----s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 FDSPEWKNV----SEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CCSGGGTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCchhcccC----CHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111111112 2357899999999999999999999987
No 185
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.2e-38 Score=329.94 Aligned_cols=244 Identities=24% Similarity=0.367 Sum_probs=200.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 95 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 95 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEe
Confidence 456789999999999999886 57889999986432 12245688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 96 APRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 999999999853 34688999999999999999999998 99999999999999999999999999987543321
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ . .. .+..... .+
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~---~~-~~~~~~~------~~ 231 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE----T---HR-RIVNVDL------KF 231 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----H---HH-HHHTTCC------CC
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH----H---HH-HHhcccc------CC
Confidence 234568999999999999999999999999999999999999997654211 1 11 1111111 11
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... ....+.+++..|++.||.+||++.|++++
T Consensus 232 ~~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 PPF----LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCc----CCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 111 22457899999999999999999999886
No 186
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.2e-38 Score=355.14 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=200.7
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEE
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~ 483 (736)
...|.+.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356777899999999999999886 78999999986432 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc---CCCcEEEEeecCCcc
Q 004689 484 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKF 560 (736)
Q Consensus 484 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~---~~~~~kl~DFGla~~ 560 (736)
||+.+|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999998843 35689999999999999999999998 999999999999995 456799999999986
Q ss_pred ccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
..... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.+.... .+... +..+....
T Consensus 174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~----i~~~~~~~- 241 (486)
T 3mwu_A 174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILKR----VETGKYAF- 241 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCCS-
T ss_pred CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----HHhCCCCC-
Confidence 54332 2234569999999999875 5899999999999999999999999765421 11111 11121110
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+.... ......+.+++.+|++.||.+|||+.|++++
T Consensus 242 -~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 -DLPQW----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -CSGGG----GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -CCccc----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00001 1122457899999999999999999999886
No 187
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.3e-39 Score=352.89 Aligned_cols=241 Identities=14% Similarity=0.124 Sum_probs=185.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHH---HHhhcCCCceeeEe-------eeeee
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVT---LLSRIHHRNLVQFL-------GYCQE 475 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~---il~~l~HpnIv~l~-------~~~~~ 475 (736)
+.+.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+. ++++++||||++++ +++..
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~ 154 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 154 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence 345688999999999999964 68999999997432 223467889994 55555899999998 55554
Q ss_pred CC-----------------eEEEEEEecCCCCHHHHhhccc--c-cccccCHHHHHHHHHHHHHHHHHHHhCCCCceecC
Q 004689 476 EG-----------------RSVLVYEFMHNGTLKEHLYGTL--T-HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHR 535 (736)
Q Consensus 476 ~~-----------------~~~lV~e~~~~gsL~~~l~~~~--~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHr 535 (736)
++ ..++||||+ +|+|.+++.... . ....+++..++.++.|++.||+|||++ +|+||
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHr 230 (377)
T 3byv_A 155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHT 230 (377)
T ss_dssp TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 43 278999999 689999996421 1 123455688889999999999999998 99999
Q ss_pred CCCCCCEEEcCCCcEEEEeecCCccccCCCCcceecccccccccCccccccC-----------cCCCcchhHHHHHHHHH
Q 004689 536 DLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-----------QLTDKSDVYSFGVILLE 604 (736)
Q Consensus 536 Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~~~~~DVwSlGvvl~e 604 (736)
||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||++||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDG----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETT----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheecC----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 999999999999999999999998532 23344567 999999999887 89999999999999999
Q ss_pred HHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 605 LISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 605 lltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
|++|+.||...........+ .. . .... ...+.+++.+|++.||++||++.|++++
T Consensus 306 lltg~~Pf~~~~~~~~~~~~----------------~~-~-~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 306 IWCADLPITKDAALGGSEWI----------------FR-S-CKNI----PQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHSSCCC------CCSGGG----------------GS-S-CCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHCCCCCcccccccchhhh----------------hh-h-ccCC----CHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99999999765422111111 00 0 0112 2358899999999999999999999975
No 188
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=329.62 Aligned_cols=248 Identities=24% Similarity=0.386 Sum_probs=195.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecCCCCHH
Q 004689 414 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 492 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~~gsL~ 492 (736)
..||+|+||.||+|... +++.||||++..........+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 47999999999999875 68899999997665555677899999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-CCcEEEEeecCCccccCCCCcceec
Q 004689 493 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGASHVSSI 571 (736)
Q Consensus 493 ~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~ 571 (736)
+++.... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++...... .....
T Consensus 108 ~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 182 (295)
T 2clq_A 108 ALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTET 182 (295)
T ss_dssp HHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Ccccc
Confidence 9986432 223467888889999999999999998 9999999999999987 8999999999997654322 12234
Q ss_pred ccccccccCccccccCc--CCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcC
Q 004689 572 VRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 649 (736)
Q Consensus 572 ~~gt~~Y~aPE~~~~~~--~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 649 (736)
..||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... ...+..... . ..+.+...
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~--~-----~~~~~~~~- 250 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AAMFKVGMF--K-----VHPEIPES- 250 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HHHHHHHHH--C-----CCCCCCTT-
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HHHHhhccc--c-----cccccccc-
Confidence 56899999999997643 7889999999999999999999997543111 011111110 0 11111222
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 650 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 650 ~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
....+.+++.+|++.||++||++.|++++
T Consensus 251 ---~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 251 ---MSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ---SCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ---CCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 23457889999999999999999999864
No 189
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.8e-38 Score=334.54 Aligned_cols=247 Identities=25% Similarity=0.417 Sum_probs=203.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
+.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++||||+++++++......++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 445688999999999999875 688999999875532 335678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
+++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 104 ~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 174 (303)
T 3a7i_A 104 GGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 174 (303)
T ss_dssp TEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred CCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence 9999999842 4588999999999999999999998 99999999999999999999999999997654332 1
Q ss_pred ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCC
Q 004689 568 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 647 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 647 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +..+.. +.+..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~----~~~~~~-----~~~~~ 241 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFL----IPKNNP-----PTLEG 241 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHH----HHHSCC-----CCCCS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH----HHHHH----hhcCCC-----CCCcc
Confidence 223456899999999999999999999999999999999999999754311 11111 111111 11122
Q ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 648 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 648 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.++ ..+.+++..|++.||++|||+.|++++.
T Consensus 242 ~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 NYS----KPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCC----HHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ccC----HHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 222 3588999999999999999999999874
No 190
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.4e-38 Score=348.13 Aligned_cols=263 Identities=22% Similarity=0.272 Sum_probs=194.4
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCC------eEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSVLV 482 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------~~~lV 482 (736)
.|.+.+.||+|+||+||+|+...+..||+|++... .....+|+++++.++||||+++++++...+ ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~----~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD----KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecC----cchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 35567899999999999999987788999988543 233457999999999999999999996543 37899
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-CCCcEEEEeecCCccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFGLSKFA 561 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~-~~~~~kl~DFGla~~~ 561 (736)
|||+.++.+ +.+.........+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 117 ~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 117 LEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999987544 33332223345688999999999999999999998 999999999999999 7899999999999865
Q ss_pred cCCCCcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHH--------HHh-
Q 004689 562 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA--------KLH- 631 (736)
Q Consensus 562 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~--------~~~- 631 (736)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+....+.... ...
T Consensus 193 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 193 IAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred cCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 43332 2234689999999998764 58999999999999999999999998765322221222110 000
Q ss_pred --hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 632 --IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 632 --~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.....+...-.......+.......+.+++.+|++.||.+|||+.|++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000100000000001111233468999999999999999999999876
No 191
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.3e-38 Score=356.67 Aligned_cols=251 Identities=28% Similarity=0.395 Sum_probs=203.4
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEE
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 482 (736)
...|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 456777899999999999999886 78999999986543 22356688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeecCCc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSK 559 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl---~~~~~~kl~DFGla~ 559 (736)
|||+.+|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999998853 35689999999999999999999998 99999999999999 567899999999997
Q ss_pred cccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcce
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 639 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 639 (736)
...... ......||+.|+|||++.+ .++.++||||+||++|||++|..||.+.... .+... +..+....
T Consensus 178 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~----i~~~~~~~ 246 (484)
T 3nyv_A 178 HFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY----DILKK----VEKGKYTF 246 (484)
T ss_dssp HBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHCCCCC
T ss_pred Eccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH----HHHHH----HHcCCCCC
Confidence 654332 2234569999999999865 6899999999999999999999999865421 12221 11222110
Q ss_pred eccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 640 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 640 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..... ......+.+++.+|++.+|.+|||+.|++++
T Consensus 247 --~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 --ELPQW----KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --CSGGG----GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00001 1123457899999999999999999999876
No 192
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.1e-38 Score=334.81 Aligned_cols=261 Identities=24% Similarity=0.390 Sum_probs=183.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++...+..++||||++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 96 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS 96 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCT
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhcc
Confidence 456789999999999999865 68899999986543 2335678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhccc----ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccC
Q 004689 488 NGTLKEHLYGTL----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 488 ~gsL~~~l~~~~----~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~ 563 (736)
+|+|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173 (303)
T ss_dssp TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence 999999985421 1234589999999999999999999998 999999999999999999999999999875533
Q ss_pred CCC----cceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 564 GAS----HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 564 ~~~----~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ................
T Consensus 174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVLMLTLQNDPPSLET 249 (303)
T ss_dssp --------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GHHHHHHTSSCCCTTC
T ss_pred CCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh----hHHHHHhccCCCcccc
Confidence 211 12234569999999999876 56899999999999999999999999765421 1111111100000001
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
...++.....++ ..+.+++.+|++.||.+||++.|++++
T Consensus 250 ~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 GVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111122222222 357899999999999999999999875
No 193
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.9e-37 Score=337.35 Aligned_cols=250 Identities=24% Similarity=0.369 Sum_probs=199.2
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--------cchhhhhHHHHHhhc-CCCceeeEeeeeeeCCe
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 478 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--------~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~ 478 (736)
.|.+.+.||+|+||.||+|++. +|+.||||+++..... ....+.+|+.+++++ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 4455689999999999999986 7999999998754321 134578899999999 79999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCC
Q 004689 479 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 558 (736)
Q Consensus 479 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla 558 (736)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 175 ~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 9999999999999999853 35689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCcceecccccccccCcccccc------CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhh
Q 004689 559 KFAVDGASHVSSIVRGTVGYLDPEYYIS------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 559 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .+... +
T Consensus 248 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~----i 317 (365)
T 2y7j_A 248 CHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI----LMLRM----I 317 (365)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----H
T ss_pred cccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH----HHHHH----H
Confidence 7654332 2234569999999999863 35888999999999999999999999764311 11111 1
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..+..... .+ .... ....+.+++.+|++.||++||++.|++++
T Consensus 318 ~~~~~~~~-~~-~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 MEGQYQFS-SP-EWDD----RSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHTCCCCC-HH-HHSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhCCCCCC-Cc-cccc----CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111000 00 0011 12358899999999999999999999874
No 194
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.2e-37 Score=346.89 Aligned_cols=197 Identities=24% Similarity=0.354 Sum_probs=163.5
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeC-----CeEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSV 480 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~~~ 480 (736)
.|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+|++++||||+++++++... ...+
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 3556789999999999999876 57889999997532 22346788999999999999999999999766 5789
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+. |+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 9999987 599998853 35689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC---------------------cceecccccccccCcccc-ccCcCCCcchhHHHHHHHHHHHhCCCcCc
Q 004689 561 AVDGAS---------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISGQEAIS 613 (736)
Q Consensus 561 ~~~~~~---------------------~~~~~~~gt~~Y~aPE~~-~~~~~~~~~DVwSlGvvl~elltG~~p~~ 613 (736)
...... ......+||++|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 543221 122456799999999986 45679999999999999999998665554
No 195
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.4e-38 Score=334.53 Aligned_cols=256 Identities=19% Similarity=0.300 Sum_probs=196.3
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcC-CCceeeEeeeeee--CCeEEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQE--EGRSVLVYE 484 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~--~~~~~lV~e 484 (736)
.|.+.+.||+|+||+||+|+.. +++.||||+++.. ....+.+|++++++++ ||||+++++++.. ....++|||
T Consensus 37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred ceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 4556789999999999999874 6899999998643 3467899999999997 9999999999987 667899999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC-cEEEEeecCCccccC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVD 563 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~-~~kl~DFGla~~~~~ 563 (736)
|+.+++|.+++. .++...+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 114 ~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 114 HVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp CCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999998873 378888999999999999999998 999999999999999776 899999999986543
Q ss_pred CCCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHH--------hhhc
Q 004689 564 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL--------HIES 634 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~--------~~~~ 634 (736)
... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+...... .+..
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH--HHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch--HHHHHHHHHhcCCchhhhHHHH
Confidence 322 234468999999999987 67899999999999999999999999543211 1111111110 0000
Q ss_pred CCc--------------ceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 635 GDI--------------QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 635 ~~~--------------~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... ...................+.+++.+|++.||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 00000000111111124568999999999999999999999875
No 196
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.8e-38 Score=333.59 Aligned_cols=256 Identities=26% Similarity=0.371 Sum_probs=194.1
Q ss_pred HHHhhccccccCceEEEEEEEC--CCc--EEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK--DGK--EIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~--~~~--~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 481 (736)
.+.+.+.||+|+||+||+|++. +++ .||||+++... ......+.+|++++++++||||+++++++..+. .++
T Consensus 19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 97 (291)
T 1u46_A 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKM 97 (291)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEE
T ss_pred HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-cee
Confidence 4556789999999999999864 233 68999987542 223467889999999999999999999998765 789
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 98 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence 99999999999998632 35688999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCc--ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 562 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 562 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
...... ......+|..|+|||++.+..++.++|||||||++|||++ |+.||...... .+.. .....+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~---~~~~~~~~~ 244 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----QILH---KIDKEGERL 244 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHH---HHHTSCCCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH----HHHH---HHHccCCCC
Confidence 443322 2233457889999999998889999999999999999999 99999765421 1111 111111100
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 687 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 687 (736)
. ........+.+++.+|++.||++||++.++++.|+++..
T Consensus 245 -----~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 245 -----P----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp -----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred -----C----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 0 111223468899999999999999999999999988743
No 197
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.9e-38 Score=338.86 Aligned_cols=265 Identities=19% Similarity=0.271 Sum_probs=197.5
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--cchhhhhHHHHHhhcCCCceeeEeeeeee--------CC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQE--------EG 477 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~--------~~ 477 (736)
.|.+.+.||+|+||+||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++.. .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 4556789999999999999985 7899999998654322 24567899999999999999999999976 45
Q ss_pred eEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecC
Q 004689 478 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 557 (736)
Q Consensus 478 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGl 557 (736)
..++||||+++ +|.+.+... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 68999999985 777777533 34589999999999999999999998 999999999999999999999999999
Q ss_pred CccccCCC---CcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhh
Q 004689 558 SKFAVDGA---SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 633 (736)
Q Consensus 558 a~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 633 (736)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+...... ..
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~ 249 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS-IT 249 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-CC
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC-CC
Confidence 97654221 222334568999999999876 56899999999999999999999999865522211111111100 00
Q ss_pred cCCcceeccCcc--------CCcCCH-HH------HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 634 SGDIQGIIDPSL--------LDEYDI-QS------MWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 634 ~~~~~~~~d~~l--------~~~~~~-~~------~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.......-.... ...... +. ...+.+++.+|++.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000000000 000011 11 2347899999999999999999999875
No 198
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.1e-38 Score=344.22 Aligned_cols=265 Identities=22% Similarity=0.289 Sum_probs=199.8
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
.+.+.+.||+|+||+||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++..++..++||||+
T Consensus 34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 113 (360)
T 3eqc_A 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113 (360)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECC
Confidence 3455678999999999999886 68999999987653 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++|+|.+++.. ...+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||++......
T Consensus 114 ~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 114 DGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp TTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 99999999853 346889999999999999999999841 7999999999999999999999999998754321
Q ss_pred cceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHH--------------------
Q 004689 567 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ-------------------- 626 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~-------------------- 626 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+..
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 12334689999999999999999999999999999999999999976442111000000
Q ss_pred --HHHHhhhcCCcceecc----CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 627 --WAKLHIESGDIQGIID----PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 627 --~~~~~~~~~~~~~~~d----~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
+...........+.++ ..............+.+++..|++.||++|||+.|++++-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 0000000000000000 0000000111234588999999999999999999999873
No 199
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.8e-38 Score=351.57 Aligned_cols=192 Identities=24% Similarity=0.358 Sum_probs=150.4
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeee-----CCeEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-----EGRSV 480 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~~~~~ 480 (736)
.|.+.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.+|++++||||+++++++.. ....+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 3566789999999999999876 68999999986532 2234568899999999999999999999943 35789
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+. |+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 134 lv~e~~~-~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 134 VVLEIAD-SDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEECCCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEeccc-cchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 9999985 689888843 35689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC--------------------------cceecccccccccCcccc-ccCcCCCcchhHHHHHHHHHHHhC
Q 004689 561 AVDGAS--------------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISG 608 (736)
Q Consensus 561 ~~~~~~--------------------------~~~~~~~gt~~Y~aPE~~-~~~~~~~~~DVwSlGvvl~elltG 608 (736)
...... ......+||++|+|||++ ....++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 532211 122345689999999986 456799999999999999999993
No 200
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.3e-37 Score=346.41 Aligned_cols=260 Identities=20% Similarity=0.335 Sum_probs=205.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCC-CceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH-RNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
|.+.++||+|+||.||+|++. +++.||||++.... ...++..|+++++.++| ++|..+..++...+..++||||+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 456789999999999999874 68999999876443 24568899999999977 55666667777888999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeecCCccccCC
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl---~~~~~~kl~DFGla~~~~~~ 564 (736)
+++|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||| +.++.+||+|||+++.....
T Consensus 86 g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999998532 34689999999999999999999998 99999999999999 68899999999999866543
Q ss_pred CCc------ceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 565 ASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 565 ~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
... ......||+.|+|||++.+..++.++|||||||+||||++|+.||.+.........+......... ..+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TSIE 238 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SCHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-ccHH
Confidence 322 122457999999999999999999999999999999999999999875532222222221111111 1111
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
. +...+ ..++.+++..|++.+|++||++.+|++.|++++..
T Consensus 239 ~-----l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 239 A-----LCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp H-----HHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H-----HhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 0 01112 24688999999999999999999999999998764
No 201
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.9e-38 Score=327.12 Aligned_cols=245 Identities=24% Similarity=0.420 Sum_probs=192.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEec
Confidence 456789999999999999986 78999999986542 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 93 VSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred cCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 999999999853 34588999999999999999999998 99999999999999999999999999997654322
Q ss_pred CcceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... .+... +..+.. .
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~----~~~~~~------~ 229 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP----TLFKK----IRGGVF------Y 229 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHCCC------C
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHHH----hhcCcc------c
Confidence 2233468999999999987765 58999999999999999999999764421 11111 111111 0
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+... ....+.+++.+|++.||.+|||+.|++++
T Consensus 230 ~~~~----~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 IPEY----LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Cchh----cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1111 12457899999999999999999999886
No 202
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-38 Score=340.99 Aligned_cols=258 Identities=21% Similarity=0.290 Sum_probs=190.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCC------eEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 480 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------~~~ 480 (736)
|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+++++.++||||+++++++.... ..+
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 456788999999999999875 689999999864322 22456889999999999999999999997653 459
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 999999 7899998853 4588899999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHH-------hh
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL-------HI 632 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~-------~~ 632 (736)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+...... .+
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 253 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 5332 233568999999999987 68999999999999999999999999865422111111110000 00
Q ss_pred hcC-------CcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 633 ESG-------DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 633 ~~~-------~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... .+...-...+ ..........+.+++.+|++.||++|||+.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 254 QSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp SCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 0000000000 00111223458899999999999999999999886
No 203
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.7e-38 Score=345.32 Aligned_cols=274 Identities=22% Similarity=0.284 Sum_probs=204.6
Q ss_pred cccCHHHHHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcC--------CCceee
Q 004689 398 HCFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH--------HRNLVQ 468 (736)
Q Consensus 398 ~~~~~~~i~~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~--------HpnIv~ 468 (736)
+.+...++....|.+.++||+|+||+||+|+.. +++.||||++... ......+.+|+.++++++ |+||++
T Consensus 27 ~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~ 105 (397)
T 1wak_A 27 HLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ 105 (397)
T ss_dssp CSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred eEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence 344445544556778899999999999999875 6889999998643 233466889999999995 788999
Q ss_pred Eeeeee----eCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE
Q 004689 469 FLGYCQ----EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 544 (736)
Q Consensus 469 l~~~~~----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl 544 (736)
+++++. .....++||||+ +++|.+.+... ....+++..+..++.|++.||.|||+++ +|+||||||+|||+
T Consensus 106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll 180 (397)
T 1wak_A 106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180 (397)
T ss_dssp EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEE
T ss_pred eecceeecCCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeE
Confidence 999987 556889999999 56666666432 2346899999999999999999999953 89999999999999
Q ss_pred cCCC-------------------------------------------------cEEEEeecCCccccCCCCcceeccccc
Q 004689 545 DKHM-------------------------------------------------RAKVSDFGLSKFAVDGASHVSSIVRGT 575 (736)
Q Consensus 545 ~~~~-------------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt 575 (736)
+.++ .+||+|||+++..... .....||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt 256 (397)
T 1wak_A 181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQT 256 (397)
T ss_dssp CCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSC
T ss_pred eccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCC
Confidence 9775 7999999999865432 2334689
Q ss_pred ccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccH--HHHHHHhhhc--------C----------
Q 004689 576 VGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI--VQWAKLHIES--------G---------- 635 (736)
Q Consensus 576 ~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l--~~~~~~~~~~--------~---------- 635 (736)
+.|+|||++.+..++.++|||||||++|||++|+.||......+..... .......... +
T Consensus 257 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 336 (397)
T 1wak_A 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK 336 (397)
T ss_dssp GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTT
T ss_pred CcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCc
Confidence 9999999999999999999999999999999999999765432211111 1111111000 0
Q ss_pred -CcceeccCcc---------CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 636 -DIQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 636 -~~~~~~d~~l---------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.+..+.+... ....+......+.+++.+|++.||++|||+.|++++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 337 GDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp SSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0000000000 002245566789999999999999999999999875
No 204
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=331.02 Aligned_cols=251 Identities=21% Similarity=0.328 Sum_probs=198.4
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEe
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 485 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~ 485 (736)
...+.+.+.||+|+||.||+|... +|+.||||++.... ....+.+|+.++++++||||+++++++...+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 344556789999999999999886 58999999987543 356788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
+++|+|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 106 ~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 106 CGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp CTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred CCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 999999999852 235688999999999999999999998 99999999999999999999999999997654332
Q ss_pred CcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCcc
Q 004689 566 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 645 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 645 (736)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... ..........
T Consensus 180 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~-~~~~~~~~~~--- 247 (314)
T 3com_A 180 A-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-------RAIFMI-PTNPPPTFRK--- 247 (314)
T ss_dssp S-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHH-HHSCCCCCSS---
T ss_pred c-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHH-hcCCCcccCC---
Confidence 2 223446899999999999989999999999999999999999999754311 101111 1111111100
Q ss_pred CCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 646 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 646 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+......+.+++.+|++.||.+|||+.|++++
T Consensus 248 ----~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 248 ----PELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ----GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11123458899999999999999999999875
No 205
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.1e-38 Score=367.63 Aligned_cols=246 Identities=24% Similarity=0.307 Sum_probs=200.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC---cccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.+.+.||+|+||.||+|+.. +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++|||
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E 422 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 422 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence 445678999999999999876 57889999997542 22345677899999887 79999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||||+.++++||+|||+++.....
T Consensus 423 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 423 YVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred CcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999953 35689999999999999999999998 9999999999999999999999999999854322
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
. ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+....+ +.+ . +..+.+
T Consensus 496 ~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~----~~~---~-i~~~~~------- 559 (674)
T 3pfq_A 496 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQ---S-IMEHNV------- 559 (674)
T ss_dssp T-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH---H-HHSSCC-------
T ss_pred C-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH----HHH---H-HHhCCC-------
Confidence 2 23345679999999999999999999999999999999999999998654221 111 1 111111
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 681 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~ev~~~ 681 (736)
.++.....++.+++..|++.||++||++ +||.++
T Consensus 560 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 560 ---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ---CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ---CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1112223458899999999999999997 777654
No 206
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9e-38 Score=329.69 Aligned_cols=261 Identities=22% Similarity=0.307 Sum_probs=196.4
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++..++..++||||+.
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc
Confidence 45678999999999999886 689999999865432 234678899999999999999999999999999999999998
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 -~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~- 158 (299)
T 2r3i_A 86 -QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 158 (299)
T ss_dssp -EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB-
T ss_pred -CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc-
Confidence 59999885432 24578889999999999999999998 999999999999999999999999999876533221
Q ss_pred ceecccccccccCccccccCc-CCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC--cce-----
Q 004689 568 VSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD--IQG----- 639 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~~~~-~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~--~~~----- 639 (736)
......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......+ .+.......-.... ...
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID---QLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHhCCCchhhhhHhhcCc
Confidence 222345899999999998755 7899999999999999999999998654221 11111111100000 000
Q ss_pred eccCccCC----cC---CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 640 IIDPSLLD----EY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 640 ~~d~~l~~----~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
...+.... .+ .......+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 00 01123467899999999999999999999874
No 207
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.2e-38 Score=331.45 Aligned_cols=251 Identities=21% Similarity=0.341 Sum_probs=195.5
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
.|.+.+.||+|+||.||+|... +++.||+|++..........+.+|+.++++++||||+++++++...+..++||||++
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 3456788999999999999986 588999999876655556788999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCc
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 567 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 567 (736)
+++|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++...... ..
T Consensus 100 ~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 172 (302)
T 2j7t_A 100 GGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQ 172 (302)
T ss_dssp TEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HH
T ss_pred CCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cc
Confidence 99999988532 34589999999999999999999998 9999999999999999999999999987532111 11
Q ss_pred ceecccccccccCccccc-----cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 568 VSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 568 ~~~~~~gt~~Y~aPE~~~-----~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ........ +.......
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~-~~~~~~~~ 244 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAK-SDPPTLLT 244 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHH-SCCCCCSS
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-------HHHHHHhc-cCCcccCC
Confidence 122346899999999984 567889999999999999999999999765421 11111111 11111110
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+......+.+++..|++.||++|||+.|++++
T Consensus 245 -------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 245 -------PSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -------ccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11123458899999999999999999999864
No 208
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.8e-38 Score=343.72 Aligned_cols=252 Identities=10% Similarity=0.009 Sum_probs=178.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhc--CCCceeeEe-------eeeeeC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI--HHRNLVQFL-------GYCQEE 476 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l--~HpnIv~l~-------~~~~~~ 476 (736)
+.+.+.||+|+||+||+|++. +++.||||++..... .....+.+|+.+++.+ +||||++++ +++..+
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 345789999999999999976 789999999986543 2244577886555555 599988855 344332
Q ss_pred -----------------CeEEEEEEecCCCCHHHHhhcccccccccCHHHH------HHHHHHHHHHHHHHHhCCCCcee
Q 004689 477 -----------------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKR------LEIAEDAAKGIEYLHTGCVPAII 533 (736)
Q Consensus 477 -----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~qia~~L~~LH~~~~~~ii 533 (736)
...++||||++ |+|.+++... ...+.+..+ ..++.|++.||+|||++ +|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 33799999999 8999999643 223344445 67889999999999998 999
Q ss_pred cCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcceecccccccccCcccccc--CcCCCcchhHHHHHHHHHHHhCCCc
Q 004689 534 HRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEA 611 (736)
Q Consensus 534 HrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DVwSlGvvl~elltG~~p 611 (736)
||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999985532 1223457799999999987 7899999999999999999999999
Q ss_pred CcccccccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 612 ISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 612 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
|......... . .........................+.+++.+|++.||++|||+.|++++
T Consensus 293 f~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 293 FGLVTPGIKG-S--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TTBCCTTCTT-C--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCcCccccc-c--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 9866421100 0 00000000000011001011223468899999999999999999999875
No 209
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-38 Score=333.28 Aligned_cols=252 Identities=24% Similarity=0.310 Sum_probs=185.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc--cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
+.+.+.||+|+||+||+|+.. +++.||||+++..... ..+.+.++...++.++||||+++++++.+++..++||||+
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 88 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 88 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECC
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehh
Confidence 456789999999999999875 6899999998754322 2233445556688889999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
+ |+|.+++.........+++..++.++.|++.||.|||++ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 164 (290)
T 3fme_A 89 D-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV- 164 (290)
T ss_dssp S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred c-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccccc-
Confidence 7 588888865544556799999999999999999999985 289999999999999999999999999997654332
Q ss_pred cceecccccccccCcccc----ccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 567 HVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~----~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
......||+.|+|||++ .+..++.++|||||||++|||++|+.||...... ...+ ......... ..
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~----~~~~~~~~~-~~-- 234 (290)
T 3fme_A 165 -AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQL----KQVVEEPSP-QL-- 234 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--HHHH----HHHHHSCCC-CC--
T ss_pred -cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch--HHHH----HHHhccCCC-Cc--
Confidence 22334699999999996 4567889999999999999999999999753311 1111 111111111 00
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
........+.+++.+|++.||++|||+.|++++
T Consensus 235 ------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 235 ------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp ------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 011123458899999999999999999999885
No 210
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1e-37 Score=354.40 Aligned_cols=249 Identities=28% Similarity=0.412 Sum_probs=197.5
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-------------ccchhhhhHHHHHhhcCCCceeeEeeeee
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------------QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 474 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-------------~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 474 (736)
.|.+.++||+|+||+||+|... +++.||||++..... .....+.+|+.++++++||||+++++++.
T Consensus 37 ~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 116 (504)
T 3q5i_A 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE 116 (504)
T ss_dssp TEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred ceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 4556789999999999999876 578999999875431 22356889999999999999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC---cEE
Q 004689 475 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAK 551 (736)
Q Consensus 475 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~---~~k 551 (736)
+....++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+|
T Consensus 117 ~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 117 DKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred cCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 99999999999999999998853 45689999999999999999999998 999999999999999876 699
Q ss_pred EEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHh
Q 004689 552 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 631 (736)
Q Consensus 552 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~ 631 (736)
|+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|..||.+.... .+...
T Consensus 190 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~---- 258 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ----DIIKK---- 258 (504)
T ss_dssp ECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----
T ss_pred EEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----
Confidence 99999998654332 233456999999999986 56899999999999999999999999865422 12111
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+..+.... +...... ....+.+++..|++.||.+|||+.|++++
T Consensus 259 i~~~~~~~--~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 259 VEKGKYYF--DFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHCCCCC--CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHcCCCCC--CccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11221110 0000011 12458899999999999999999999876
No 211
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.1e-38 Score=343.04 Aligned_cols=259 Identities=21% Similarity=0.271 Sum_probs=190.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCccc-----------chhhhhHHHHHhhcCCCceeeEeeeeee---
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG-----------KREFTNEVTLLSRIHHRNLVQFLGYCQE--- 475 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~-----------~~~~~~E~~il~~l~HpnIv~l~~~~~~--- 475 (736)
|.+.+.||+|+||.||+|...+++.||||++....... .+.+.+|++++++++||||+++++++..
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 103 (362)
T 3pg1_A 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEE 103 (362)
T ss_dssp CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCT
T ss_pred eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccC
Confidence 34578999999999999998889999999986543221 1568899999999999999999999843
Q ss_pred --CCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEE
Q 004689 476 --EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 553 (736)
Q Consensus 476 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~ 553 (736)
....++||||+. |+|.+.+.. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 104 ~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 104 PAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp TTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEE
Confidence 346899999998 588888753 234689999999999999999999998 99999999999999999999999
Q ss_pred eecCCccccCCCCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhh
Q 004689 554 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 554 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+... .
T Consensus 177 Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~----~ 250 (362)
T 3pg1_A 177 DFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV----V 250 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH----H
T ss_pred ecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH----c
Confidence 999997543322 2234568999999999886 67899999999999999999999999865532222222111 1
Q ss_pred hcCCcc-----------eeccCccCC-------cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 633 ESGDIQ-----------GIIDPSLLD-------EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 633 ~~~~~~-----------~~~d~~l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
...... ..+...+.. .........+.+++.+|++.||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 100000 000000000 0011223458899999999999999999999876
No 212
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.1e-37 Score=330.86 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=196.0
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--------ccchhhhhHHHHHhhcCCCceeeEeeeeeeCC
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 477 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--------~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 477 (736)
...|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 345677899999999999999876 578999999865321 12346889999999999999999999987655
Q ss_pred eEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEe
Q 004689 478 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSD 554 (736)
Q Consensus 478 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~---~kl~D 554 (736)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 8999999999999998843 45688999999999999999999998 9999999999999987654 99999
Q ss_pred ecCCccccCCCCcceecccccccccCccccc---cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHh
Q 004689 555 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 631 (736)
Q Consensus 555 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~ 631 (736)
||+++..... .......||+.|+|||++. ...++.++|||||||++|||++|..||...... ..+.....
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~-- 233 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VSLKDQIT-- 233 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS---SCHHHHHH--
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH---HHHHHHHH--
Confidence 9999865332 2223456899999999974 467889999999999999999999999765422 12222211
Q ss_pred hhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 632 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 632 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.+.... .+..... ....+.+++.+|++.||++||++.|++++
T Consensus 234 --~~~~~~--~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 --SGKYNF--IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp --HTCCCC--CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --hCcccc--Cchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 111110 0111111 23458899999999999999999999865
No 213
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=331.00 Aligned_cols=254 Identities=24% Similarity=0.381 Sum_probs=196.4
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
+.+.+.||+|+||.||+|.... .+|+|++.... ......+.+|+.++++++||||+++++++...+..++||||++
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~ 112 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCK 112 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCC
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeeccc
Confidence 4567899999999999998863 59999987543 2334678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC---
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG--- 564 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~--- 564 (736)
+++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 113 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 113 GRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp SEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999998542 34688899999999999999999998 999999999999998 679999999998754221
Q ss_pred -CCcceecccccccccCcccccc---------CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhc
Q 004689 565 -ASHVSSIVRGTVGYLDPEYYIS---------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES 634 (736)
Q Consensus 565 -~~~~~~~~~gt~~Y~aPE~~~~---------~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~ 634 (736)
.........||+.|+|||++.. ..++.++|||||||++|||++|+.||...... .+.. ....
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~----~~~~ 257 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE----AIIW----QMGT 257 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH----HHHH----HHHT
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----Hhcc
Confidence 1122233458999999999874 35788999999999999999999999765421 1111 1112
Q ss_pred CCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 635 GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 635 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
+........ .+ ...+.+++..|++.||++|||+.|+++.|+++...
T Consensus 258 ~~~~~~~~~----~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNLSQI----GM----GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCCCCS----SC----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCCcC----CC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 211111111 11 23478999999999999999999999999987543
No 214
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9e-38 Score=364.45 Aligned_cols=258 Identities=21% Similarity=0.337 Sum_probs=203.2
Q ss_pred HHHHhhccccccCceEEEEEEECC----CcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 482 (736)
..+.+.+.||+|+||.||+|.+.. +..||||+++.... .....+.+|+.++++++||||+++++++.+ +..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEE
Confidence 445567889999999999998752 45799999865432 234678899999999999999999999854 568999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
|||+++|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 469 ~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 469 MELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999632 34588999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCcceec
Q 004689 563 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 641 (736)
Q Consensus 563 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 641 (736)
...........||+.|+|||++.+..++.++|||||||++|||++ |..||.+.... .+...+ ..+...
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----~~~~~i----~~~~~~--- 611 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRI----ENGERL--- 611 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHH----HHTCCC---
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHH----HcCCCC---
Confidence 444333344557889999999998899999999999999999997 99999765422 122211 111111
Q ss_pred cCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004689 642 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 689 (736)
Q Consensus 642 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 689 (736)
..+......+.+++.+|++.||++||++.||++.|+.++..+
T Consensus 612 ------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 612 ------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 011122346889999999999999999999999999987544
No 215
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.9e-37 Score=338.23 Aligned_cols=261 Identities=21% Similarity=0.287 Sum_probs=189.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeCC------eEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 480 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------~~~ 480 (736)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 456789999999999999876 68899999987542 223456889999999999999999999997654 789
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+.+ +|.+.+. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 107 IVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999975 7887773 3478888999999999999999998 999999999999999999999999999976
Q ss_pred ccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHH--------------
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ-------------- 626 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~-------------- 626 (736)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+..
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 5332 122345699999999999999999999999999999999999999976542111101100
Q ss_pred -HHHHhhhcC-C-----cceeccCccCCcC---CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 627 -WAKLHIESG-D-----IQGIIDPSLLDEY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 627 -~~~~~~~~~-~-----~~~~~d~~l~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
......... . +...+........ .......+.+++.+|++.||++|||++|++++-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 000000000 0 0000000000000 112345789999999999999999999998873
No 216
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.8e-37 Score=336.01 Aligned_cols=260 Identities=21% Similarity=0.284 Sum_probs=197.8
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeC-----CeEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~~~l 481 (736)
.|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 3556789999999999999876 688899999875432 2346688999999999999999999998654 46899
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
||||+. |+|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 108 v~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 108 VQDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 999998 58988884 24588999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCc--ceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 562 VDGASH--VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 562 ~~~~~~--~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.. ........
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~----~~~~~~~~ 254 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG----ILGSPSQE 254 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHH----HHCSCCHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHH----HhCCCCHH
Confidence 432221 1234579999999998765 4589999999999999999999999987653322222221 11000000
Q ss_pred ---e------------eccCccC--CcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 639 ---G------------IIDPSLL--DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 639 ---~------------~~d~~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
. ...+... ..........+.+++.+|++.||++|||+.|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0000000 00001122458899999999999999999999876
No 217
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.4e-37 Score=345.78 Aligned_cols=197 Identities=25% Similarity=0.335 Sum_probs=169.5
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhc------CCCceeeEeeeeeeCCeEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI------HHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l------~HpnIv~l~~~~~~~~~~~l 481 (736)
.|.+.+.||+|+||+||+|... +++.||||+++.. ......+.+|+.+++.+ .|+||+++++++......++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 3566789999999999999876 5889999998643 22345677899988887 57799999999999999999
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc--EEEEeecCCc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSK 559 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~--~kl~DFGla~ 559 (736)
||||+. ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 177 v~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 999996 68999886432 24589999999999999999999998 9999999999999999987 9999999997
Q ss_pred cccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccc
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 616 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~ 616 (736)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 54322 233568999999999999999999999999999999999999998665
No 218
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-37 Score=327.00 Aligned_cols=249 Identities=27% Similarity=0.298 Sum_probs=198.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---------ccchhhhhHHHHHhhcC-CCceeeEeeeeeeCCe
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---------QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGR 478 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---------~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~ 478 (736)
|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+++++++. ||||+++++++.....
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 98 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence 445789999999999999986 688999999875431 11345788999999995 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCC
Q 004689 479 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 558 (736)
Q Consensus 479 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla 558 (736)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 99 FFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccch
Confidence 9999999999999999853 35688999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCcceecccccccccCccccc------cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhh
Q 004689 559 KFAVDGASHVSSIVRGTVGYLDPEYYI------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 559 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
....... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .+.. .+
T Consensus 172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~----~~ 241 (298)
T 1phk_A 172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM----LMLR----MI 241 (298)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HH
T ss_pred hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH----HHHH----HH
Confidence 7654332 223356899999999985 456889999999999999999999999755421 1111 11
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..+.... .... .......+.+++.+|++.||++||++.|++++
T Consensus 242 ~~~~~~~--~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 242 MSGNYQF--GSPE----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHTCCCC--CTTT----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred hcCCccc--Cccc----ccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1111110 0000 01223458899999999999999999999864
No 219
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.1e-37 Score=335.92 Aligned_cols=266 Identities=21% Similarity=0.254 Sum_probs=187.9
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeeeCCe-------EE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-------SV 480 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~-------~~ 480 (736)
.|.+.+.||+|+||+||+|+.. +++.||||++.... .......+|++.++.++||||+++++++...+. .+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~ 102 (360)
T 3e3p_A 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLN 102 (360)
T ss_dssp TEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEE
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEE
Confidence 4556789999999999999986 68999999986543 234456678888899999999999999965443 78
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHH--hCCCCceecCCCCCCCEEEcC-CCcEEEEeecC
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--TGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGL 557 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH--~~~~~~iiHrDikp~NILl~~-~~~~kl~DFGl 557 (736)
+||||+.+ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+||+|||+
T Consensus 103 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 103 VVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 99999986 565555444445567888999999999999999999 76 9999999999999997 89999999999
Q ss_pred CccccCCCCcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHH--------
Q 004689 558 SKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------- 628 (736)
Q Consensus 558 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~-------- 628 (736)
++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.+..
T Consensus 179 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
T 3e3p_A 179 AKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256 (360)
T ss_dssp CBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHH
Confidence 986543322 2344689999999998764 48999999999999999999999998755322222222110
Q ss_pred HHhhhcCCcceeccC------ccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 629 KLHIESGDIQGIIDP------SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 629 ~~~~~~~~~~~~~d~------~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.............+. .............+.+++.+|++.||.+|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000000000000 00011122245678999999999999999999999876
No 220
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.4e-38 Score=339.61 Aligned_cols=253 Identities=24% Similarity=0.320 Sum_probs=195.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHH-HhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~i-l~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
+.+.+.||+|+||+||+|+.. +|+.||||++..... .....+..|+.+ ++.++||||+++++++...+..++||||+
T Consensus 53 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (340)
T 3an0_A 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 132 (340)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCC
T ss_pred eeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHh
Confidence 344678999999999999874 689999999975432 223445556555 77889999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
++ +|.+++.........+++..++.++.|++.||.|||++ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 ~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-- 207 (340)
T 3an0_A 133 DT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS-- 207 (340)
T ss_dssp SE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH--
T ss_pred hC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceecccc--
Confidence 85 99998865444456799999999999999999999974 28999999999999999999999999999765322
Q ss_pred cceecccccccccCccccc----cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 567 HVSSIVRGTVGYLDPEYYI----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~~----~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .............
T Consensus 208 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~~----- 276 (340)
T 3an0_A 208 VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPSP----- 276 (340)
T ss_dssp HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCCC-----
T ss_pred cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------HHHHHHHhcCCCC-----
Confidence 1223346999999999974 347889999999999999999999999753311 1111111111111
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
... .......+.+++.+|++.||++||++.|++++-
T Consensus 277 -~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 312 (340)
T 3an0_A 277 -QLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHP 312 (340)
T ss_dssp -CCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred -CCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 000 011234588999999999999999999998863
No 221
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=342.41 Aligned_cols=263 Identities=19% Similarity=0.260 Sum_probs=180.8
Q ss_pred hccccccCceEEEEEEEC---CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeee--eCCeEEEEEEecC
Q 004689 413 EKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVLVYEFMH 487 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--~~~~~~lV~e~~~ 487 (736)
.++||+|+||+||+|++. +++.||||++.... ....+.+|+.+|++++||||+++++++. .....++||||+.
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999976 57889999986432 2456889999999999999999999995 4678999999997
Q ss_pred CCCHHHHhhccc-----ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE----cCCCcEEEEeecCC
Q 004689 488 NGTLKEHLYGTL-----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLS 558 (736)
Q Consensus 488 ~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl----~~~~~~kl~DFGla 558 (736)
+ +|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 5 7877774221 1122489999999999999999999998 99999999999999 67789999999999
Q ss_pred ccccCCCC--cceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCccccccc-----ccccHHHHHHH
Q 004689 559 KFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGA-----NCRNIVQWAKL 630 (736)
Q Consensus 559 ~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~-----~~~~l~~~~~~ 630 (736)
+....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ........+..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 86543221 22344679999999999987 458999999999999999999999997543210 00011111111
Q ss_pred hhhcCC---cceec------------cCccCCcCC---------HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 631 HIESGD---IQGII------------DPSLLDEYD---------IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 631 ~~~~~~---~~~~~------------d~~l~~~~~---------~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.+.... ...+. ......... ......+.+|+.+|++.||.+|||+.|++++
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111000 00000 000000000 0012357899999999999999999999886
No 222
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=330.33 Aligned_cols=249 Identities=24% Similarity=0.403 Sum_probs=192.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhc-CCCceeeEeeeeee------CCeEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE------EGRSVL 481 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~------~~~~~l 481 (736)
|.+.+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.+++++ +||||+++++++.. .+..++
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 446789999999999999885 68999999986543 3456788999999999 89999999999976 468899
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 105 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 99999999999998643 235688899999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCcceecccccccccCccccc-----cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 562 VDGASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 562 ~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
.... .......||+.|+|||++. +..++.++|||||||++|||++|+.||...... .... . +....
T Consensus 180 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~---~-~~~~~ 250 (326)
T 2x7f_A 180 DRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALF---L-IPRNP 250 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH---H-HHHSC
T ss_pred CcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHH---H-hhcCc
Confidence 3322 1223346899999999987 567889999999999999999999999754411 1111 1 11111
Q ss_pred cceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 637 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 637 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..... ...+ ...+.+++.+|++.||.+||++.|++++
T Consensus 251 ~~~~~----~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 251 APRLK----SKKW----SKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp CCCCS----CSCS----CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccCC----cccc----CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111 1112 2358899999999999999999999875
No 223
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=324.66 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=194.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC----cccchhhhhHHHHHhhcCCCceeeEeeee--eeCCeEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYC--QEEGRSVLV 482 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~~~~--~~~~~~~lV 482 (736)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++ .+....++|
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence 456789999999999999875 68899999986542 23346789999999999999999999998 455688999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
|||+.++ |.+++... ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 87 ~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 9999987 76766543 245689999999999999999999998 99999999999999999999999999998654
Q ss_pred CCC-CcceecccccccccCccccccCc--CCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcce
Q 004689 563 DGA-SHVSSIVRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 639 (736)
Q Consensus 563 ~~~-~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 639 (736)
... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .+.. .+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~i~~~~~-- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY----KLFE----NIGKGSY-- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHH----HHHHCCC--
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH----HHHH----HHhcCCC--
Confidence 322 22233456999999999997643 477999999999999999999999765421 1111 1111211
Q ss_pred eccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 640 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 640 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.+...+ ...+.+++.+|++.||.+||++.|++++
T Consensus 231 ----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ----AIPGDC----GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CCCSSS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCCCcc----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111122 2357899999999999999999999886
No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.8e-37 Score=331.55 Aligned_cols=265 Identities=21% Similarity=0.287 Sum_probs=198.2
Q ss_pred HHHhhccccccCceEEEEEEEC--CCcEEEEEEeccCCc--ccchhhhhHHHHHhhc---CCCceeeEeeeee-----eC
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI---HHRNLVQFLGYCQ-----EE 476 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~--~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l---~HpnIv~l~~~~~-----~~ 476 (736)
.|.+.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+.+++.+ +||||+++++++. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 3456789999999999999983 678999999875432 2244677888888877 8999999999987 55
Q ss_pred CeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeec
Q 004689 477 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 556 (736)
Q Consensus 477 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFG 556 (736)
...++||||+. |+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCc
Confidence 67899999998 69999986432 33488999999999999999999998 99999999999999999999999999
Q ss_pred CCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 557 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 557 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+............
T Consensus 166 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 166 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp SCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred ccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence 99754322 1223456899999999999999999999999999999999999999865422111111111000000000
Q ss_pred ccee------cc---CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 637 IQGI------ID---PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 637 ~~~~------~d---~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.... +. ..............+.+++.+|++.||++||++.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 00 000001111223457899999999999999999999864
No 225
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.2e-37 Score=334.22 Aligned_cols=259 Identities=23% Similarity=0.291 Sum_probs=201.2
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccc-----------------hhhhhHHHHHhhcCCCceeeEee
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGK-----------------REFTNEVTLLSRIHHRNLVQFLG 471 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~-----------------~~~~~E~~il~~l~HpnIv~l~~ 471 (736)
.|.+.+.||+|+||.||+|.. +++.||||++........ ..+.+|+.++++++||||+++++
T Consensus 32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 110 (348)
T 2pml_X 32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG 110 (348)
T ss_dssp TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 345678999999999999999 799999999875422111 67899999999999999999999
Q ss_pred eeeeCCeEEEEEEecCCCCHHHHhhcc--cc--cccccCHHHHHHHHHHHHHHHHHHHh-CCCCceecCCCCCCCEEEcC
Q 004689 472 YCQEEGRSVLVYEFMHNGTLKEHLYGT--LT--HEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDK 546 (736)
Q Consensus 472 ~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~--~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~iiHrDikp~NILl~~ 546 (736)
++.+.+..++||||+++|+|.+++... .. ....+++..++.++.|++.||.|||+ . +|+||||||+||+++.
T Consensus 111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDK 187 (348)
T ss_dssp EEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECT
T ss_pred EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcC
Confidence 999999999999999999999983210 11 14678999999999999999999999 7 9999999999999999
Q ss_pred CCcEEEEeecCCccccCCCCcceecccccccccCccccccC-cCCC-cchhHHHHHHHHHHHhCCCcCcccccccccccH
Q 004689 547 HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTD-KSDVYSFGVILLELISGQEAISNEKFGANCRNI 624 (736)
Q Consensus 547 ~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~-~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l 624 (736)
++.+||+|||++...... ......||+.|+|||.+.+. .++. ++|||||||++|||++|+.||...... ..+
T Consensus 188 ~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~ 261 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---VEL 261 (348)
T ss_dssp TSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---HHH
T ss_pred CCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHH
Confidence 999999999999865433 23445699999999999877 6666 999999999999999999999865421 112
Q ss_pred HHHHHHhhhcCCcceecc------CccC---CcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 625 VQWAKLHIESGDIQGIID------PSLL---DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 625 ~~~~~~~~~~~~~~~~~d------~~l~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
... +..+......+ +... ..........+.+++.+|++.||.+||++.|++++
T Consensus 262 ~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNN----IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHH----HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHH----HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 11121111000 0000 00001223468899999999999999999999875
No 226
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.9e-37 Score=337.48 Aligned_cols=255 Identities=22% Similarity=0.312 Sum_probs=179.7
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeeeeC------CeE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 479 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------~~~ 479 (736)
.|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++... ...
T Consensus 30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 109 (367)
T 2fst_X 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 109 (367)
T ss_dssp TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence 3456789999999999999865 68899999986532 22345678999999999999999999998654 567
Q ss_pred EEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
++|+|++ +++|.+++.. ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 110 ~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 110 YLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp EEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred EEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 9999999 6899888742 4689999999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.+ ...... .
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~----~~g~p~-~ 251 (367)
T 2fst_X 181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR----LVGTPG-A 251 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH----HHCSCC-H
T ss_pred ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH----HhCCCC-H
Confidence 64322 233568999999999987 6789999999999999999999999986542211111111 110000 0
Q ss_pred eeccC-----------ccC--CcCCH-----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 639 GIIDP-----------SLL--DEYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 639 ~~~d~-----------~l~--~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+.+.. .+. ..... .....+.+++.+|++.||.+|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000 000 00010 112457899999999999999999999876
No 227
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2e-37 Score=329.68 Aligned_cols=250 Identities=23% Similarity=0.309 Sum_probs=192.7
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEeccCCc--ccchhhhhHHHHHhhcC--CCceeeEeeeeeeCCeEEEEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~--HpnIv~l~~~~~~~~~~~lV~e 484 (736)
.|.+.+.||+|+||.||+|...+++.||||++..... .....+.+|++++++++ ||||+++++++...+..++|||
T Consensus 29 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 108 (313)
T 3cek_A 29 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108 (313)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe
Confidence 3556789999999999999998899999999865432 23467889999999997 5999999999999999999999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
+.+++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||+++ +.+||+|||+++.....
T Consensus 109 -~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 109 -CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp -CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred -cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 668899999853 34688889999999999999999998 9999999999999964 89999999999865433
Q ss_pred CCc-ceecccccccccCcccccc-----------CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhh
Q 004689 565 ASH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 565 ~~~-~~~~~~gt~~Y~aPE~~~~-----------~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .. .......
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~-~~~~~~~ 253 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QI-SKLHAII 253 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HH-HHHHHHH
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HH-HHHHHHH
Confidence 221 2234569999999999875 4678899999999999999999999975431 11 1111111
Q ss_pred hcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 633 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 633 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.. .....++......+.+++.+|++.||.+||++.|++++-
T Consensus 254 ~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 254 DP---------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CT---------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hc---------ccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 11 111111111134588999999999999999999998864
No 228
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6.1e-37 Score=323.26 Aligned_cols=250 Identities=24% Similarity=0.343 Sum_probs=189.7
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeee------------
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------------ 475 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------------ 475 (736)
.|.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|+.++++++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 4556789999999999999975 7899999998643 2334678899999999999999999998865
Q ss_pred -CCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 004689 476 -EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 554 (736)
Q Consensus 476 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~D 554 (736)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred cCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 45679999999999999999642 34577888999999999999999998 999999999999999999999999
Q ss_pred ecCCccccCCC-------------CcceecccccccccCccccccC-cCCCcchhHHHHHHHHHHHhCCCcCcccccccc
Q 004689 555 FGLSKFAVDGA-------------SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGAN 620 (736)
Q Consensus 555 FGla~~~~~~~-------------~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~ 620 (736)
||+++...... ........||+.|+|||++.+. .++.++|||||||++|||++ ||.....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~--- 233 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME--- 233 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH---
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh---
Confidence 99997653221 1122345689999999999864 78999999999999999998 4432210
Q ss_pred cccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 621 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 621 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
...+... +.... ......++......+.+++.+|++.||.+|||+.|++++
T Consensus 234 ~~~~~~~----~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 RVNILKK----LRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHH----HHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHh----ccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 0111111 11111 111122233334567899999999999999999999875
No 229
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-37 Score=337.36 Aligned_cols=259 Identities=22% Similarity=0.278 Sum_probs=194.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHHHHhhcCCCceeeEeeeeeeC-----CeEEEE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVLV 482 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~~~lV 482 (736)
+.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+.++++++||||+++++++... ...++|
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence 446789999999999999876 688999999864332 2345678999999999999999999988754 678999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
|||+. |+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 93 QELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp ECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99997 589888853 4588999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCc---------ceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhh
Q 004689 563 DGASH---------VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 632 (736)
Q Consensus 563 ~~~~~---------~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 632 (736)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+...... ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~ 239 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ----LLLIFGII 239 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHH
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHHHHh
Confidence 32211 1223468999999998764 6789999999999999999999999986542111 11111111
Q ss_pred hcCC----cceeccC-------cc--CCc-----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 633 ESGD----IQGIIDP-------SL--LDE-----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 633 ~~~~----~~~~~d~-------~l--~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.... ......+ .+ ... ........+.+++.+|++.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0000000 00 000 001123457899999999999999999999875
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7.6e-37 Score=333.43 Aligned_cols=259 Identities=20% Similarity=0.294 Sum_probs=192.8
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeE------
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS------ 479 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~------ 479 (736)
.|.+.+.||+|+||+||+|... +|+.||||++..... .....+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 3456788999999999999876 689999999975432 2245688999999999999999999999877654
Q ss_pred EEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
++||||+. ++|.+.+. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 123 ~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp EEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred EEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999998 58888773 3488999999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhc--CC
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES--GD 636 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~--~~ 636 (736)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.........+ ..
T Consensus 193 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 193 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred ccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 54322 233568999999999987 789999999999999999999999998654222111111100000000 00
Q ss_pred cc-----e---eccCccCCc---CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 637 IQ-----G---IIDPSLLDE---YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 637 ~~-----~---~~d~~l~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+. . .+....... ........+.+++.+|++.||++|||+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 0 000000000 001123468899999999999999999999876
No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=326.56 Aligned_cols=262 Identities=21% Similarity=0.260 Sum_probs=190.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeee--------------
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-------------- 474 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-------------- 474 (736)
|.+.+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 455788999999999999987 48999999987665555677899999999999999999999873
Q ss_pred eCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-CCCcEEEE
Q 004689 475 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVS 553 (736)
Q Consensus 475 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~-~~~~~kl~ 553 (736)
+....++||||+. |+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999998 699998842 4588889999999999999999998 999999999999997 56799999
Q ss_pred eecCCccccCCCC--cceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHH--
Q 004689 554 DFGLSKFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-- 628 (736)
Q Consensus 554 DFGla~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~-- 628 (736)
|||+++....... .......||..|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999986543221 12233457999999998875 678999999999999999999999998654221111111100
Q ss_pred -----HHhhhcCCcceeccCccC-C-----cCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 629 -----KLHIESGDIQGIIDPSLL-D-----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 629 -----~~~~~~~~~~~~~d~~l~-~-----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
..... ..+...+..... . .........+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 244 VHEEDRQELL-SVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCHHHHHHHH-TTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Cchhhhhhhh-hcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000 000000000000 0 0001123468899999999999999999999875
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1e-36 Score=319.96 Aligned_cols=253 Identities=26% Similarity=0.367 Sum_probs=201.3
Q ss_pred HHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEE
Q 004689 405 IEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 405 i~~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 481 (736)
.....|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34456777899999999999999886 689999999865432 335678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC---CcEEEEeecCC
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLS 558 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~---~~~kl~DFGla 558 (736)
||||+++++|.+.+.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999998853 34688999999999999999999998 99999999999999764 47999999999
Q ss_pred ccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcc
Q 004689 559 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 638 (736)
Q Consensus 559 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 638 (736)
........ .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... .+.. .+..+...
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~----~~~~~~~~ 240 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILK----RVETGKYA 240 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCC
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH----HHHH----HHHcCCCC
Confidence 76543322 223458999999998865 4899999999999999999999999765421 1111 11222211
Q ss_pred eeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 639 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 639 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
. +......+ ...+.+++.+|++.||++|||+.|++++
T Consensus 241 ~--~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 241 F--DLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp C--CSGGGTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred C--Cchhhhhc----CHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0 00001111 2458899999999999999999999885
No 233
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.4e-36 Score=325.88 Aligned_cols=263 Identities=21% Similarity=0.273 Sum_probs=199.7
Q ss_pred HHHHhhccccccCceEEEEEEE-C-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCc------eeeEeeeeeeCCeE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKL-K-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQEEGRS 479 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~-~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn------Iv~l~~~~~~~~~~ 479 (736)
..|.+.+.||+|+||+||+|.. . +++.||||+++... .....+.+|+++++.++|++ ++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 3456778999999999999987 3 68899999986432 33466889999999997654 99999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-------------
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK------------- 546 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~------------- 546 (736)
++||||+ +++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence 9999999 88999998543 123578899999999999999999998 9999999999999987
Q ss_pred ------CCcEEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccc
Q 004689 547 ------HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 620 (736)
Q Consensus 547 ------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~ 620 (736)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred ccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 668999999999764332 2334689999999999999999999999999999999999999976542211
Q ss_pred cccHHHHHHH----hhhcCCcceecc--------------------Ccc--CCcCCHHHHHHHHHHHhhccCCCCCCCCC
Q 004689 621 CRNIVQWAKL----HIESGDIQGIID--------------------PSL--LDEYDIQSMWKIEEKALMCVLPHGHMRPS 674 (736)
Q Consensus 621 ~~~l~~~~~~----~~~~~~~~~~~d--------------------~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 674 (736)
...+...... ..........+. ..+ ...........+.+++.+|++.||.+|||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 1111110000 000000000000 000 00112344567899999999999999999
Q ss_pred HHHHHHH
Q 004689 675 ISEVLKD 681 (736)
Q Consensus 675 ~~ev~~~ 681 (736)
+.|++++
T Consensus 323 ~~ell~h 329 (339)
T 1z57_A 323 LREALKH 329 (339)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999875
No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.6e-36 Score=329.39 Aligned_cols=199 Identities=25% Similarity=0.296 Sum_probs=167.1
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcC-CC-----ceeeEeeeeeeCCeEEE
Q 004689 409 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HR-----NLVQFLGYCQEEGRSVL 481 (736)
Q Consensus 409 ~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-Hp-----nIv~l~~~~~~~~~~~l 481 (736)
.|.+.+.||+|+||+||+|... +++.||||+++... ....++..|+.+++.++ |+ +|+++++++...+..++
T Consensus 55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 133 (382)
T 2vx3_A 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL 133 (382)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence 4556789999999999999876 67889999986432 23456778999988885 44 49999999999999999
Q ss_pred EEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc--CCCcEEEEeecCCc
Q 004689 482 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD--KHMRAKVSDFGLSK 559 (736)
Q Consensus 482 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~--~~~~~kl~DFGla~ 559 (736)
||||+. |+|.+++.... ...+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 134 v~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 134 VFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 999996 59999986432 24588999999999999999999952 13899999999999995 47889999999998
Q ss_pred cccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccc
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 616 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~ 616 (736)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 65332 233568999999999999999999999999999999999999998654
No 235
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=325.91 Aligned_cols=244 Identities=25% Similarity=0.390 Sum_probs=190.9
Q ss_pred HHHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc------ccchhhhhHHHHHhhc----CCCceeeEeee
Q 004689 404 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY------QGKREFTNEVTLLSRI----HHRNLVQFLGY 472 (736)
Q Consensus 404 ~i~~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~------~~~~~~~~E~~il~~l----~HpnIv~l~~~ 472 (736)
+.....|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344556777899999999999999875 688999999865432 2345677899999999 89999999999
Q ss_pred eeeCCeEEEEEEe-cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-CCCcE
Q 004689 473 CQEEGRSVLVYEF-MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRA 550 (736)
Q Consensus 473 ~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~-~~~~~ 550 (736)
+...+..++|+|+ +.+++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++ .++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 789999999853 34589999999999999999999998 999999999999999 88999
Q ss_pred EEEeecCCccccCCCCcceecccccccccCccccccCcCC-CcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHH
Q 004689 551 KVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK 629 (736)
Q Consensus 551 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~ 629 (736)
||+|||+++...... .....||+.|+|||++.+..+. .++|||||||++|||++|+.||.... .+.
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~---- 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EIL---- 246 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHH----
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHh----
Confidence 999999998654332 2344689999999999876664 58999999999999999999996432 010
Q ss_pred HhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 630 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 630 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.... .+... ....+.+++.+|++.||++||++.|++++
T Consensus 247 ----~~~~------~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 ----EAEL------HFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----HTCC------CCCTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----hhcc------CCccc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0100 01111 22357889999999999999999999875
No 236
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.3e-36 Score=338.65 Aligned_cols=250 Identities=23% Similarity=0.304 Sum_probs=185.5
Q ss_pred hhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 412 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 412 ~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
..+.||+|+||+||.+...+|+.||||++.... ...+.+|+++++++ +||||+++++++.+.+..++||||+. |+
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs 94 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN 94 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence 357899999999987766779999999986432 34578899999887 89999999999999999999999996 69
Q ss_pred HHHHhhcccccccc---cCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC-------------CcEEEEe
Q 004689 491 LKEHLYGTLTHEQR---INWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-------------MRAKVSD 554 (736)
Q Consensus 491 L~~~l~~~~~~~~~---l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~-------------~~~kl~D 554 (736)
|.+++......... ..+..++.++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp HHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 99999654322111 12334578999999999999998 99999999999999754 4899999
Q ss_pred ecCCccccCCCCc---ceecccccccccCcccccc-------CcCCCcchhHHHHHHHHHHHh-CCCcCccccccccccc
Q 004689 555 FGLSKFAVDGASH---VSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRN 623 (736)
Q Consensus 555 FGla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~-------~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~ 623 (736)
||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----- 246 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR----- 246 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-----
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-----
Confidence 9999866443322 1234569999999999975 678999999999999999999 99999654311
Q ss_pred HHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 624 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 624 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
......... .. +......+.....++.+++.+|++.||.+|||+.||+++
T Consensus 247 ~~~i~~~~~---~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 247 ESNIIRGIF---SL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HHHHHHTCC---CC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHhcCCC---Cc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 111111110 00 011111234455678999999999999999999999874
No 237
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.6e-37 Score=327.49 Aligned_cols=240 Identities=21% Similarity=0.360 Sum_probs=196.4
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc------cchhhhhHHHHHhhcC--CCceeeEeeeeeeCCe
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGR 478 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~il~~l~--HpnIv~l~~~~~~~~~ 478 (736)
..|.+.+.||+|+||.||+|... +++.||||++...... ....+.+|+.++++++ ||||+++++++...+.
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 34566789999999999999865 6889999998755322 2356788999999996 5999999999999999
Q ss_pred EEEEEEecCC-CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-CCCcEEEEeec
Q 004689 479 SVLVYEFMHN-GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFG 556 (736)
Q Consensus 479 ~~lV~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~-~~~~~kl~DFG 556 (736)
.++|+|++.+ ++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999986 899999853 45688999999999999999999998 999999999999999 78999999999
Q ss_pred CCccccCCCCcceecccccccccCccccccCcC-CCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcC
Q 004689 557 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 635 (736)
Q Consensus 557 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~ 635 (736)
+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... +. .+
T Consensus 196 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~--------~~ 258 (320)
T 3a99_A 196 SGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------II--------RG 258 (320)
T ss_dssp TCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HH--------HC
T ss_pred ccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hh--------cc
Confidence 998654322 233469999999999987665 6789999999999999999999975420 00 01
Q ss_pred CcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 636 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 636 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.. . ....+ ...+.+++.+|++.||++||++.||+++
T Consensus 259 ~~--~----~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 259 QV--F----FRQRV----SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CC--C----CSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc--c----ccccC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10 0 11112 2357899999999999999999999885
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=326.45 Aligned_cols=255 Identities=21% Similarity=0.302 Sum_probs=191.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc--ccchhhhhHHHHHhhcCCCceeeEeeeeeeCCe------EE
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------SV 480 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~------~~ 480 (736)
|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...+. .+
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 445688999999999999875 689999999865432 224568899999999999999999999987654 49
Q ss_pred EEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 481 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 481 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+||||+. |+|.+++. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 106 lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 9999997 58877763 3488899999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCCcceecccccccccCcccccc-CcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHH----------
Q 004689 561 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK---------- 629 (736)
Q Consensus 561 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~---------- 629 (736)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.....
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4322 233468999999999887 6789999999999999999999999986542211111111000
Q ss_pred ------HhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 630 ------LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 630 ------~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.... .+.....+.+ ..........+.+++.+|++.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 252 NDKAAKSYIQ--SLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp SCHHHHHHHH--TSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhHHHHHHHH--hCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 0000000000 01111234568899999999999999999999875
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.1e-36 Score=325.86 Aligned_cols=254 Identities=26% Similarity=0.328 Sum_probs=175.2
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEeccCCc-ccchhhhhHHH-HHhhcCCCceeeEeeeeeeCCeEEEEEEecC
Q 004689 411 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVT-LLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 487 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lV~e~~~ 487 (736)
.+.+.||+|+||.||+|... +++.||||++..... ....++..|+. +++.++||||+++++++...+..++||||+.
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~ 104 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS 104 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC
Confidence 35678999999999999986 689999999975432 22344555655 7777899999999999999999999999998
Q ss_pred CCCHHHHhhccc-ccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCC
Q 004689 488 NGTLKEHLYGTL-THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 566 (736)
Q Consensus 488 ~gsL~~~l~~~~-~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~ 566 (736)
+ +|.+++.... .....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 105 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 181 (327)
T 3aln_A 105 T-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181 (327)
T ss_dssp E-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred C-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc
Confidence 5 7877764321 1245688999999999999999999995 3899999999999999999999999999976543221
Q ss_pred cceecccccccccCcccc----ccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 567 HVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 567 ~~~~~~~gt~~Y~aPE~~----~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
.....||+.|+|||++ .+..++.++|||||||++|||++|+.||...... ...... ...+..
T Consensus 182 --~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~-~~~~~~----- 247 (327)
T 3aln_A 182 --KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV------FDQLTQ-VVKGDP----- 247 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CC-CCCSCC-----
T ss_pred --cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH------HHHHHH-HhcCCC-----
Confidence 2233689999999998 4567899999999999999999999999754311 000000 001111
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
+.+...........+.+++.+|++.||++||++.||+++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111111111223468899999999999999999999876
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.1e-36 Score=325.34 Aligned_cols=248 Identities=20% Similarity=0.247 Sum_probs=168.3
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCceeeEeeeeee----CCeEEEEEEecC
Q 004689 413 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVYEFMH 487 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----~~~~~lV~e~~~ 487 (736)
.+.||+|+||+||+|... +++.||||++... .....+....++.++||||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 457999999999999887 6899999998642 1222223334566799999999999876 455899999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEeecCCccccCC
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~---~~~~kl~DFGla~~~~~~ 564 (736)
+|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 110 gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 110 GGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp TEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 999999996432 34689999999999999999999998 9999999999999986 455999999999754322
Q ss_pred CCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCc
Q 004689 565 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 644 (736)
Q Consensus 565 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 644 (736)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.............. ....+... +...
T Consensus 185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~--~~~~ 255 (336)
T 3fhr_A 185 ---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR----RIRLGQYG--FPNP 255 (336)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------C--CCTT
T ss_pred ---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH----hhhccccc--cCch
Confidence 22345689999999999888999999999999999999999999976542211111111 11111000 0000
Q ss_pred cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 645 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 645 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.. ......+.+++.+|++.||.+|||+.|++++-
T Consensus 256 ~~----~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 256 EW----SEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp TS----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hh----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 01 12234588999999999999999999999863
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.2e-36 Score=329.45 Aligned_cols=263 Identities=20% Similarity=0.338 Sum_probs=196.6
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcC-----------CCceeeEeeeeee
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----------HRNLVQFLGYCQE 475 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-----------HpnIv~l~~~~~~ 475 (736)
..|.+.+.||+|+||+||+|+.. +++.||||++.... .....+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 34667889999999999999874 68899999986432 23456889999999886 8999999999976
Q ss_pred CC----eEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc------
Q 004689 476 EG----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD------ 545 (736)
Q Consensus 476 ~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~------ 545 (736)
.+ ..++||||+ +++|.+++.... ...+++..+..++.|++.||.|||+++ +|+||||||+|||++
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence 54 789999999 889999986432 345889999999999999999999952 899999999999995
Q ss_pred CCCcEEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccc---cc
Q 004689 546 KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN---CR 622 (736)
Q Consensus 546 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~---~~ 622 (736)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 3458999999999765432 2234689999999999999999999999999999999999999986542111 11
Q ss_pred cHHHHHHHhhhc--------C-----------CcceeccCcc---------CCcCCHHHHHHHHHHHhhccCCCCCCCCC
Q 004689 623 NIVQWAKLHIES--------G-----------DIQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPS 674 (736)
Q Consensus 623 ~l~~~~~~~~~~--------~-----------~~~~~~d~~l---------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 674 (736)
.+..... .... + ....+..... ...++......+.+++.+|++.||++|||
T Consensus 249 ~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 249 HIAQIIE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHH-hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111111 0000 0 0000000000 01234556678999999999999999999
Q ss_pred HHHHHHH
Q 004689 675 ISEVLKD 681 (736)
Q Consensus 675 ~~ev~~~ 681 (736)
+.|++++
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999875
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.6e-36 Score=324.94 Aligned_cols=264 Identities=19% Similarity=0.245 Sum_probs=198.1
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CC-cEEEEEEeccCCcccchhhhhHHHHHhhcCCCc------eeeEeeeeeeCCe
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DG-KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQEEGR 478 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~-~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn------Iv~l~~~~~~~~~ 478 (736)
...|.+.+.||+|+||+||+|... ++ +.||+|+++.. ......+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 345667889999999999999875 34 68999998643 233566888999999998766 9999999999999
Q ss_pred EEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE--------------
Q 004689 479 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL-------------- 544 (736)
Q Consensus 479 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl-------------- 544 (736)
.++||||+ +++|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 66777777432 224588999999999999999999998 99999999999999
Q ss_pred -----cCCCcEEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCccccccc
Q 004689 545 -----DKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA 619 (736)
Q Consensus 545 -----~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~ 619 (736)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 66789999999999764332 233469999999999999999999999999999999999999998654221
Q ss_pred ccccHHHHHHH----hhhcCCc-ceeccCcc---------------------CCcCCHHHHHHHHHHHhhccCCCCCCCC
Q 004689 620 NCRNIVQWAKL----HIESGDI-QGIIDPSL---------------------LDEYDIQSMWKIEEKALMCVLPHGHMRP 673 (736)
Q Consensus 620 ~~~~l~~~~~~----~~~~~~~-~~~~d~~l---------------------~~~~~~~~~~~l~~l~~~cl~~dP~~RP 673 (736)
....+...... ....... ........ ...........+.+++.+|++.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 11111110000 0000000 00000000 0011223345788999999999999999
Q ss_pred CHHHHHHH
Q 004689 674 SISEVLKD 681 (736)
Q Consensus 674 t~~ev~~~ 681 (736)
|+.|++++
T Consensus 327 t~~e~l~h 334 (355)
T 2eu9_A 327 TLAEALLH 334 (355)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999875
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=334.79 Aligned_cols=247 Identities=24% Similarity=0.331 Sum_probs=183.7
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEEEEecCC
Q 004689 410 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 488 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV~e~~~~ 488 (736)
+.+.+.||+|+||+||.....+++.||||++.... ...+.+|+++|+++ +||||+++++++.+....++||||+.
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 34467899999999766556679999999986432 34577899999999 89999999999999999999999996
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-----CCcEEEEeecCCccccC
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----HMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~-----~~~~kl~DFGla~~~~~ 563 (736)
|+|.+++.... ..+....++.++.|++.||.|||+. +|+||||||+|||++. ...+||+|||+++....
T Consensus 102 g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 102 ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 59999986432 2233345578999999999999998 9999999999999953 34688999999986543
Q ss_pred CCC--cceecccccccccCccccc---cCcCCCcchhHHHHHHHHHHHh-CCCcCcccccccccccHHHHHHHhhhcCCc
Q 004689 564 GAS--HVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDI 637 (736)
Q Consensus 564 ~~~--~~~~~~~gt~~Y~aPE~~~---~~~~~~~~DVwSlGvvl~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 637 (736)
... .......||+.|+|||++. ...++.++|||||||++|||++ |..||..... ... .........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-----~~~---~~~~~~~~~ 247 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-----RQA---NILLGACSL 247 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-----HHH---HHHTTCCCC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-----HHH---HHHhccCCc
Confidence 321 2234456999999999997 4567889999999999999999 9999864331 111 111111111
Q ss_pred ceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 638 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 638 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
. .. .........+.+++.+|++.||.+|||+.||+++
T Consensus 248 ~-~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 D-CL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp T-TS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred c-cc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0 00 1112334457899999999999999999999965
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=314.92 Aligned_cols=249 Identities=24% Similarity=0.299 Sum_probs=175.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc-c-chhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEEec
Q 004689 410 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-G-KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 486 (736)
Q Consensus 410 ~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-~-~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e~~ 486 (736)
+.+.+.||+|+||.||+|... +++.||||++...... . .+.+.++..+++.++||||+++++++...+..++||||+
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (318)
T 2dyl_A 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM 106 (318)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc
Confidence 345688999999999999986 6899999999754322 1 233445556788889999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHh-CCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 565 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~ 565 (736)
++.+..+... ....+++..+..++.|++.||.|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 -~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 107 -GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp -SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred -CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 4455544421 13468899999999999999999998 4 89999999999999999999999999997554322
Q ss_pred CcceecccccccccCccccc-----cCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCccee
Q 004689 566 SHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 640 (736)
Q Consensus 566 ~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (736)
......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ........... ..
T Consensus 180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~-~~-- 248 (318)
T 2dyl_A 180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVLTKVLQEE-PP-- 248 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHHSC-CC--
T ss_pred --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHHHHHhccC-CC--
Confidence 223346899999999994 456889999999999999999999999753311 11111111111 10
Q ss_pred ccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 641 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 641 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
.+... ......+.+++.+|++.||.+||++.|++++
T Consensus 249 ---~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 ---LLPGH--MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---CCCSS--SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---CCCcc--CCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00000 0122358899999999999999999999876
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.4e-36 Score=343.07 Aligned_cols=267 Identities=22% Similarity=0.321 Sum_probs=200.4
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeee------CCeE
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRS 479 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------~~~~ 479 (736)
..|.+.+.||+|+||+||+|... +|+.||||+++... ......+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 45677899999999999999875 68999999987542 2335568899999999999999999998765 6778
Q ss_pred EEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEeec
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFG 556 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~---~kl~DFG 556 (736)
++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++. +||+|||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 99999999999999996532 233588888999999999999999998 9999999999999997665 9999999
Q ss_pred CCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCC
Q 004689 557 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 636 (736)
Q Consensus 557 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 636 (736)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||...... ..|.......+.
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~------~~~~~~i~~~~~ 241 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP------VQWHGKVREKSN 241 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH------HHSSTTCC----
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch------hhhhhhhhcccc
Confidence 998654432 223456999999999999999999999999999999999999999754211 111111100000
Q ss_pred cceeccCc------------cCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHH-----HHHHHHHH
Q 004689 637 IQGIIDPS------------LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEV-----LKDIQDAI 686 (736)
Q Consensus 637 ~~~~~d~~------------l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev-----~~~L~~~~ 686 (736)
........ ............+.+++..|+..||++|||+.|+ .+.++.++
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 00000000 0112334456789999999999999999999884 44455443
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-35 Score=344.81 Aligned_cols=240 Identities=19% Similarity=0.283 Sum_probs=192.0
Q ss_pred HHHHhhccccccCceEEEEEEEC--CCcEEEEEEeccCC-cccchhhhhHHHHHhhcCCCceeeEeeeeeeCCe-----E
Q 004689 408 ATKMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-----S 479 (736)
Q Consensus 408 ~~~~~~~~IG~G~fG~Vy~~~~~--~~~~vAvK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~-----~ 479 (736)
..|.+.+.||+|+||+||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 35667889999999999999876 58999999986432 2334568899999999999999999999987665 7
Q ss_pred EEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 480 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 480 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
++||||+++++|.+++. ..+++..++.++.|++.||.|||++ +|+||||||+|||++.+ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 99999999999988763 2689999999999999999999998 99999999999999986 89999999998
Q ss_pred cccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcce
Q 004689 560 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 639 (736)
Q Consensus 560 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 639 (736)
..... ....||+.|+|||++.+. ++.++|||||||++|||++|..|+.........
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------ 285 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------ 285 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------------
T ss_pred hcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc------------------
Confidence 65432 335699999999998765 488999999999999999999888653311100
Q ss_pred eccCccCCcCCHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHH
Q 004689 640 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIV 687 (736)
Q Consensus 640 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~ev~~~L~~~~~ 687 (736)
...........+.+++.+|++.||.+|| +++++.+.|...+.
T Consensus 286 ------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 286 ------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0000111224688999999999999999 46677777776653
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.3e-35 Score=308.68 Aligned_cols=233 Identities=14% Similarity=0.132 Sum_probs=181.7
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEeccCCcc---cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEE
Q 004689 407 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 407 ~~~~~~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 482 (736)
...|.+.+.||+|+||.||+|... +++.||||++...... ....+.+|+.++++++||||+++++++...+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 345677899999999999999986 4899999999765332 236788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
|||+++++|.+++... .....+.+++.|++.||.|||++ +|+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999999998432 34456788999999999999998 99999999999999999999997443
Q ss_pred CCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceecc
Q 004689 563 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 642 (736)
Q Consensus 563 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 642 (736)
|++| ++.++|||||||++|||++|+.||.+....+....... .. .+... .
T Consensus 175 ---------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~----~~-~~~~~---~ 224 (286)
T 3uqc_A 175 ---------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER----DT-AGQPI---E 224 (286)
T ss_dssp ---------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB----CT-TSCBC---C
T ss_pred ---------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH----Hh-ccCCC---C
Confidence 3332 67899999999999999999999986553211100000 00 00000 0
Q ss_pred CccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 004689 643 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 688 (736)
Q Consensus 643 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 688 (736)
...........+.+++.+|++.||++| |+.|+++.|+++...
T Consensus 225 ---~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 225 ---PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp ---HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred ---hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 000111223458899999999999999 999999999987543
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=9.8e-35 Score=321.25 Aligned_cols=239 Identities=13% Similarity=0.091 Sum_probs=178.8
Q ss_pred hhccccccCceEEEEEEEC-CCcEEEEEEeccCCc---ccchhhhhHHHHHhhcCC-CceeeE-----------------
Q 004689 412 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHH-RNLVQF----------------- 469 (736)
Q Consensus 412 ~~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~il~~l~H-pnIv~l----------------- 469 (736)
+.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +|....
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 3578999999999999965 789999999874322 235678899999999977 322111
Q ss_pred ----eeeeee-----CCeEEEEEEecCCCCHHHHhhcc---cccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCC
Q 004689 470 ----LGYCQE-----EGRSVLVYEFMHNGTLKEHLYGT---LTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDL 537 (736)
Q Consensus 470 ----~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDi 537 (736)
+.++.. ....+++|+++ +++|.+++... ......+++..++.++.|+++||+|||++ +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 111111 12456777755 67999888421 22345688889999999999999999998 9999999
Q ss_pred CCCCEEEcCCCcEEEEeecCCccccCCCCcceecccccccccCcccc----------ccCcCCCcchhHHHHHHHHHHHh
Q 004689 538 KSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYY----------ISQQLTDKSDVYSFGVILLELIS 607 (736)
Q Consensus 538 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~----------~~~~~~~~~DVwSlGvvl~ellt 607 (736)
||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|||++
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 999999999999999999998754322 344568 999999999 55568889999999999999999
Q ss_pred CCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 004689 608 GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 681 (736)
Q Consensus 608 G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 681 (736)
|+.||......+.... ++... ... ...+.+++.+|++.||++||++.|++++
T Consensus 313 g~~Pf~~~~~~~~~~~----------------~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 313 ADLPNTDDAALGGSEW----------------IFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp SSCCCCTTGGGSCSGG----------------GGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCCcchhhhHHH----------------HHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9999976542211111 11100 112 2458899999999999999999999765
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.1e-35 Score=314.43 Aligned_cols=245 Identities=18% Similarity=0.190 Sum_probs=182.8
Q ss_pred HHHHHHhhccccccCceEEEEEEECCCcEEEEEEeccCCc--------ccchhhhhHHHHHhhcC---------CCceee
Q 004689 406 EDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIH---------HRNLVQ 468 (736)
Q Consensus 406 ~~~~~~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--------~~~~~~~~E~~il~~l~---------HpnIv~ 468 (736)
....|.+.+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+.+++.++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 345677889999999999999998 589999999976532 12266889999999886 666655
Q ss_pred Eeee-----------------eee-------------CCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHH
Q 004689 469 FLGY-----------------CQE-------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAA 518 (736)
Q Consensus 469 l~~~-----------------~~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia 518 (736)
+.+. +.+ .+..++||||+++|++.+.+.. ..+++..+..++.|++
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence 5554 433 6789999999999977666632 4578999999999999
Q ss_pred HHHHHHH-hCCCCceecCCCCCCCEEEcCCC--------------------cEEEEeecCCccccCCCCcceeccccccc
Q 004689 519 KGIEYLH-TGCVPAIIHRDLKSSNILLDKHM--------------------RAKVSDFGLSKFAVDGASHVSSIVRGTVG 577 (736)
Q Consensus 519 ~~L~~LH-~~~~~~iiHrDikp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~ 577 (736)
.||.||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 87 999999999999999887 8999999999865432 3469999
Q ss_pred ccCccccccCcCCCcchhHHHHHH-HHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccCccCCcCCHHHHHH
Q 004689 578 YLDPEYYISQQLTDKSDVYSFGVI-LLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWK 656 (736)
Q Consensus 578 Y~aPE~~~~~~~~~~~DVwSlGvv-l~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 656 (736)
|+|||++.+.. +.++||||+|++ .+++++|..||...... ..+.+ ........ ..............+
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~---~~~~~~~~----~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTD---KMLKQMTF----KTKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHH---HHHHTCCC----SSCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh---hHHHH---hhhhhhcc----CcccchhhhhhcCHH
Confidence 99999998766 889999998777 77888999998542100 00111 11101000 011111112345667
Q ss_pred HHHHHhhccCCCCCCCCCHHHHH-HH
Q 004689 657 IEEKALMCVLPHGHMRPSISEVL-KD 681 (736)
Q Consensus 657 l~~l~~~cl~~dP~~RPt~~ev~-~~ 681 (736)
+.+++.+|++.| |++|++ ++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 999999999976 888887 53
No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.1e-33 Score=298.78 Aligned_cols=223 Identities=22% Similarity=0.271 Sum_probs=174.6
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHH-hhcCCCceeeEeeeeee----CCeEEEEEEec
Q 004689 413 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLL-SRIHHRNLVQFLGYCQE----EGRSVLVYEFM 486 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il-~~l~HpnIv~l~~~~~~----~~~~~lV~e~~ 486 (736)
.+.||+|+||.||+|... +++.||+|++.. ...+.+|++++ +..+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 478999999999999875 689999999853 34577899988 55699999999999977 67889999999
Q ss_pred CCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEeecCCccccC
Q 004689 487 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 563 (736)
Q Consensus 487 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~---~~~~kl~DFGla~~~~~ 563 (736)
++|+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++....
T Consensus 98 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 98 DGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999999653 234689999999999999999999998 9999999999999998 7899999999986432
Q ss_pred CCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCcccccccccccHHHHHHHhhhcCCcceeccC
Q 004689 564 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 643 (736)
Q Consensus 564 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 643 (736)
+..++.++|||||||++|||++|+.||.......... .....+..
T Consensus 172 ----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------------~~~~~~~~ 216 (299)
T 3m2w_A 172 ----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------------GMKTRIRM 216 (299)
T ss_dssp ----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------------CSCCSSCT
T ss_pred ----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------------HHHHHHhh
Confidence 2346789999999999999999999997554211000 00000000
Q ss_pred ccCCcCC----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 004689 644 SLLDEYD----IQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 682 (736)
Q Consensus 644 ~l~~~~~----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 682 (736)
.. ...+ ......+.+++.+|++.||.+|||+.|++++-
T Consensus 217 ~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 217 GQ-YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp TC-CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cc-ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 00 0011 11234688999999999999999999998863
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.7e-29 Score=285.74 Aligned_cols=186 Identities=16% Similarity=0.107 Sum_probs=130.3
Q ss_pred cccccCceEEEEEEE-CCCcEEEEEEeccCCc----------ccchhhhhHHHHHhhc-CCCceeeEeeeeeeCCeEEEE
Q 004689 415 KIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSY----------QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 415 ~IG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~----------~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV 482 (736)
..+.|++|.+..++. -.|+.+|||++..... ...++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456777776666542 3588999999975421 1234689999999999 799999999999999999999
Q ss_pred EEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCcccc
Q 004689 483 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 562 (736)
Q Consensus 483 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~ 562 (736)
|||++||+|.+.|.. ...++.. +|+.||+.||+|||++ |||||||||+|||++.++++||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999953 3345543 5889999999999998 99999999999999999999999999998654
Q ss_pred CCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcC
Q 004689 563 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI 612 (736)
Q Consensus 563 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~ 612 (736)
... ......+||++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 391 ~~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 432 23345679999999999875 4677899999999998887765554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=3e-26 Score=261.02 Aligned_cols=182 Identities=18% Similarity=0.227 Sum_probs=145.6
Q ss_pred hccccccCceEEEEEEECCCcEEEEEEeccCCcc--------cchhhhhHHHHHhhcCCCceeeEeeeeeeCCeEEEEEE
Q 004689 413 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV~e 484 (736)
.+.||+|+||+||+|... ++.+|+|+....... ..+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 578999999999999554 789999987543221 12347899999999999999977667767778899999
Q ss_pred ecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCC
Q 004689 485 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 564 (736)
Q Consensus 485 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~ 564 (736)
|+++|+|.+++.. +..++.|+++||.|||++ +|+||||||+|||++. ++||+|||+++.....
T Consensus 420 ~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 420 YINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp CCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred CCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 9999999999853 457899999999999998 9999999999999999 9999999999876443
Q ss_pred CCcc------eecccccccccCcccccc--CcCCCcchhHHHHHHHHHHHhCCCcC
Q 004689 565 ASHV------SSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAI 612 (736)
Q Consensus 565 ~~~~------~~~~~gt~~Y~aPE~~~~--~~~~~~~DVwSlGvvl~elltG~~p~ 612 (736)
.... .....||+.|||||++.. ..|+...|+||..+-..+.+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 2211 235679999999999987 67888899999999888888777665
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=1.1e-22 Score=212.57 Aligned_cols=141 Identities=17% Similarity=0.112 Sum_probs=113.9
Q ss_pred hccccccCceEEEEEEECCCcEEEEEEeccCCcc------------------cchhhhhHHHHHhhcCCCceeeEeeeee
Q 004689 413 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ------------------GKREFTNEVTLLSRIHHRNLVQFLGYCQ 474 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~------------------~~~~~~~E~~il~~l~HpnIv~l~~~~~ 474 (736)
.+.||+|+||.||+|...+|+.||||+++..... ....+.+|+++|++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 4889999999999999977999999998643211 2345889999999999 4 66666554
Q ss_pred eCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 004689 475 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 554 (736)
Q Consensus 475 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~D 554 (736)
. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++ ++.+||+|
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECC
T ss_pred c-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEE
Confidence 4 45699999999999988 421 12346899999999999998 999999999999999 99999999
Q ss_pred ecCCccccCCCCcceecccccccccCcccccc
Q 004689 555 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS 586 (736)
Q Consensus 555 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 586 (736)
||+|+ .+..|+|||++..
T Consensus 236 FG~a~--------------~~~~~~a~e~l~r 253 (282)
T 1zar_A 236 FPQSV--------------EVGEEGWREILER 253 (282)
T ss_dssp CTTCE--------------ETTSTTHHHHHHH
T ss_pred CCCCe--------------ECCCCCHHHHHHH
Confidence 99986 3455789998753
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=8.9e-19 Score=180.50 Aligned_cols=134 Identities=24% Similarity=0.263 Sum_probs=102.8
Q ss_pred hhccccccCceEEEEEEE-CCCcE--EEEEEeccCCccc------------------------chhhhhHHHHHhhcCCC
Q 004689 412 LEKKIGSGGFGVVYYGKL-KDGKE--IAVKVLTSNSYQG------------------------KREFTNEVTLLSRIHHR 464 (736)
Q Consensus 412 ~~~~IG~G~fG~Vy~~~~-~~~~~--vAvK~l~~~~~~~------------------------~~~~~~E~~il~~l~Hp 464 (736)
+.+.||+|+||.||+|.. .+|+. ||||+++...... ...+.+|+.+|.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999998 67889 9999975431110 12578899999999888
Q ss_pred ce--eeEeeeeeeCCeEEEEEEecCC-C----CHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHH-hCCCCceecCC
Q 004689 465 NL--VQFLGYCQEEGRSVLVYEFMHN-G----TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH-TGCVPAIIHRD 536 (736)
Q Consensus 465 nI--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH-~~~~~~iiHrD 536 (736)
++ ..++++ ...++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+|||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 64 334432 356899999942 4 66665421 123345788999999999999 87 999999
Q ss_pred CCCCCEEEcCCCcEEEEeecCCccc
Q 004689 537 LKSSNILLDKHMRAKVSDFGLSKFA 561 (736)
Q Consensus 537 ikp~NILl~~~~~~kl~DFGla~~~ 561 (736)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.65 E-value=2.3e-17 Score=196.40 Aligned_cols=112 Identities=28% Similarity=0.433 Sum_probs=105.0
Q ss_pred CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceee
Q 004689 222 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 300 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 300 (736)
+++|+.|||++|+|+|.+|..|++|++|+.|+|++|+++|.+| .+++|++|+.|||++|+|+|.+|..+++|++|+.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 4689999999999999999999999999999999999999999 799999999999999999999999999999999999
Q ss_pred cccccCcCCCCccc-ccccccccccCCcccccCC
Q 004689 301 VQNNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 301 l~~N~l~g~~P~~~-~~~~~~l~~~~n~~~c~~~ 333 (736)
|++|+|+|.||..- +.......|.||+.+|+.+
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 99999999999763 5566778899999999864
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.65 E-value=1.8e-16 Score=168.07 Aligned_cols=146 Identities=29% Similarity=0.489 Sum_probs=126.6
Q ss_pred CchHHHHHHHHHHcC----CCCcCCCCCCCCCCCCCceEEecCCC-CCceEEEEccCCCCCc--cCCccccccccccccc
Q 004689 181 SIDGVAIVSVISLYS----SADWAQEGGDPCLPVPWSWLQCNSDP-QPSITVIHLSSKNLTG--NIPSDLTKLSSLVELW 253 (736)
Q Consensus 181 ~~~~~al~~l~~~~~----~~~w~~~~~dpc~~~~~~~v~c~~~~-~~~l~~L~L~~n~l~g--~~p~~~~~l~~L~~L~ 253 (736)
..|..||.++|+.+. +.+|.. +.|||. ..|.||.|+... ..+|+.|+|++|+++| .+|..|.++++|++|+
T Consensus 5 ~~~~~aL~~~k~~~~~~~~l~~W~~-~~~~C~-~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~ 82 (313)
T 1ogq_A 5 PQDKQALLQIKKDLGNPTTLSSWLP-TTDCCN-RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY 82 (313)
T ss_dssp HHHHHHHHHHHHHTTCCGGGTTCCT-TSCTTT-TCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred HHHHHHHHHHHHhcCCcccccCCCC-CCCCCc-CCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeee
Confidence 357899999999985 468964 478992 239999997532 2689999999999999 9999999999999999
Q ss_pred ccc-cccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCCCCcccc--cccccccccCCcc
Q 004689 254 LDG-NSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNIN 328 (736)
Q Consensus 254 Ls~-N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~--~~~~~l~~~~n~~ 328 (736)
|++ |++.+.+| .|+++++|++|+|++|+|++.+|..++++++|+.|+|++|.++|.+|..+. ..+..+.+.+|..
T Consensus 83 L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 995 99999988 799999999999999999999999999999999999999999999998874 4556777887743
No 257
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=1.4e-16 Score=171.00 Aligned_cols=135 Identities=16% Similarity=0.160 Sum_probs=94.8
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEeccCCcc-----cchh-----------------hhhHHHHHhhcCCCceee
Q 004689 411 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ-----GKRE-----------------FTNEVTLLSRIHHRNLVQ 468 (736)
Q Consensus 411 ~~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~-----~~~~-----------------~~~E~~il~~l~HpnIv~ 468 (736)
.+...||+|+||.||+|...+|+.||||+++..... ..++ ..+|...|.++.+.++..
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v 177 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV 177 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 456789999999999999999999999998643110 0111 123455555554433321
Q ss_pred EeeeeeeCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC
Q 004689 469 FLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 548 (736)
Q Consensus 469 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~ 548 (736)
..-+.. ...+|||||+++++|.+.... .....++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 178 p~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 178 PEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred Ceeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 111111 123799999999888654311 12346789999999999998 999999999999999877
Q ss_pred ----------cEEEEeecCCcc
Q 004689 549 ----------RAKVSDFGLSKF 560 (736)
Q Consensus 549 ----------~~kl~DFGla~~ 560 (736)
.+.|+||+.+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 389999998754
No 258
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=1.7e-15 Score=180.56 Aligned_cols=141 Identities=19% Similarity=0.234 Sum_probs=123.3
Q ss_pred chHHHHHHHHHHcCCCCcCCCC----CCC--CCCCCC------------ceEEecCCCCCceEEEEccCCCCCccCCccc
Q 004689 182 IDGVAIVSVISLYSSADWAQEG----GDP--CLPVPW------------SWLQCNSDPQPSITVIHLSSKNLTGNIPSDL 243 (736)
Q Consensus 182 ~~~~al~~l~~~~~~~~w~~~~----~dp--c~~~~~------------~~v~c~~~~~~~l~~L~L~~n~l~g~~p~~~ 243 (736)
.|..||.++|+.+..++|+..+ .+| | .| .||.|+. ..+|+.|+|++|+|+|.+|+.|
T Consensus 269 ~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C---~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls~~~L~G~ip~~l 343 (876)
T 4ecn_A 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSL---NWNFNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAKGRVPDAI 343 (876)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCC---SCCCSSCGGGTTCCTTEEECT--TSCEEEEECTTTCCEEEECGGG
T ss_pred HHHHHHHHHHHHcCCCCCCcCCCcccccCCcc---ccccccccccccCcCceEecC--CCCEEEEECccCCCCCcCchHH
Confidence 4899999999999878997664 467 7 68 9999976 3699999999999999999999
Q ss_pred ccccccccccc-cccccCCC------------------------------------------------------------
Q 004689 244 TKLSSLVELWL-DGNSLTGP------------------------------------------------------------ 262 (736)
Q Consensus 244 ~~l~~L~~L~L-s~N~l~~~------------------------------------------------------------ 262 (736)
++|++|+.|+| ++|.++|.
T Consensus 344 ~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l 423 (876)
T 4ecn_A 344 GQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRI 423 (876)
T ss_dssp GGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCC
T ss_pred hccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccccc
Confidence 99999999999 88766554
Q ss_pred ----------------CC-CCCCCCCCcEEEcCCCCCCC-----------------CCCcccc--CccccceeecccccC
Q 004689 263 ----------------IP-DFSGCPDLRIIHLEDNQLTG-----------------PLPSSLM--NLPNLRELYVQNNML 306 (736)
Q Consensus 263 ----------------~p-~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~l~~N~l 306 (736)
+| .+++|++|++|+|++|+|+| .+|..++ +|++|+.|+|++|++
T Consensus 424 ~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l 503 (876)
T 4ecn_A 424 SLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPN 503 (876)
T ss_dssp CCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTT
T ss_pred chhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCC
Confidence 66 68899999999999999998 4999988 999999999999999
Q ss_pred cCCCCccccc--ccccccccCCc
Q 004689 307 SGTVPSSLLS--KNVVLNYAGNI 327 (736)
Q Consensus 307 ~g~~P~~~~~--~~~~l~~~~n~ 327 (736)
.|.+|..+.. .+..+.+.+|.
T Consensus 504 ~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 504 MTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CCSCCGGGGGCSSCCEEECTTCT
T ss_pred CccChHHHhCCCCCCEEECcCCC
Confidence 9999987743 55778888885
No 259
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.54 E-value=5.3e-15 Score=172.17 Aligned_cols=139 Identities=20% Similarity=0.270 Sum_probs=120.3
Q ss_pred chHHHHHHHHHHcCCC-------------CcCCCCCCCCCCCCC---ceEEecCCCCCceEEEEccCCCCCccCCccccc
Q 004689 182 IDGVAIVSVISLYSSA-------------DWAQEGGDPCLPVPW---SWLQCNSDPQPSITVIHLSSKNLTGNIPSDLTK 245 (736)
Q Consensus 182 ~~~~al~~l~~~~~~~-------------~w~~~~~dpc~~~~~---~~v~c~~~~~~~l~~L~L~~n~l~g~~p~~~~~ 245 (736)
.|..||.+++....-. +|.. +.||| .| .||.|+.. .+|+.|+|++|+|+|.+|++|++
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c---~w~~~~GV~C~~~--~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELD---MWGAQPGVSLNSN--GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGG---GTTCCTTEEECTT--CCEEEEECTTSCCEEEECGGGGG
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcc---cccCCCCeEEcCC--CCEEEEEecCcccCCcCChHHhc
Confidence 4889999999997643 4543 37788 58 99999755 69999999999999999999999
Q ss_pred ccccccccccccc-------------------------------------------------------------------
Q 004689 246 LSSLVELWLDGNS------------------------------------------------------------------- 258 (736)
Q Consensus 246 l~~L~~L~Ls~N~------------------------------------------------------------------- 258 (736)
|++|+.|+|++|.
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 9999999999984
Q ss_pred -----------cCCCCC-CCCCCCCCcEEEcCCCCCCCC-----------------CCcccc--CccccceeecccccCc
Q 004689 259 -----------LTGPIP-DFSGCPDLRIIHLEDNQLTGP-----------------LPSSLM--NLPNLRELYVQNNMLS 307 (736)
Q Consensus 259 -----------l~~~~p-~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~ 307 (736)
++| +| .+++|++|++|+|++|.|+|. +|..++ ++++|+.|+|++|.++
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 446 56 689999999999999999986 999999 9999999999999999
Q ss_pred CCCCcccc--cccccccccCCc
Q 004689 308 GTVPSSLL--SKNVVLNYAGNI 327 (736)
Q Consensus 308 g~~P~~~~--~~~~~l~~~~n~ 327 (736)
|.+|..+. ..+..+.+.+|.
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCT
T ss_pred ccChHHHhcCCCCCEEECcCCC
Confidence 99998874 455777888885
No 260
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.52 E-value=5.7e-16 Score=174.44 Aligned_cols=171 Identities=13% Similarity=0.093 Sum_probs=86.3
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecC------
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS------ 219 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~------ 219 (736)
++.+..|.|+.|.++.++| +..+..++.|.++.|.+.... ....+..... .-| ....+.|..
T Consensus 57 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L---~~N---~l~~~~~~~l~~L~~ 124 (487)
T 3oja_A 57 FTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA---ANN---NISRVSCSRGQGKKN 124 (487)
T ss_dssp CTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC---CSS---CCCCEEECCCSSCEE
T ss_pred CCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC---cCC---cCCCCCccccCCCCE
Confidence 4567777777777777666 666677777777776553100 0001110000 001 122233321
Q ss_pred ----------------CCCCceEEEEccCCCCCccCCcccc-cccccccccccccccCCCCCCCCCCCCCcEEEcCCCCC
Q 004689 220 ----------------DPQPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQL 282 (736)
Q Consensus 220 ----------------~~~~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l 282 (736)
..+++|+.|+|++|.|++..|..+. .|++|+.|+|++|.|++. |.+..+++|++|+|++|.|
T Consensus 125 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l 203 (487)
T 3oja_A 125 IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKL 203 (487)
T ss_dssp EECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCC
T ss_pred EECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCC
Confidence 1123445555555555544444443 445555555555555544 2233455666666666666
Q ss_pred CCCCCccccCccccceeecccccCcCCCCcccc--cccccccccCCccccc
Q 004689 283 TGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNINLHE 331 (736)
Q Consensus 283 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~--~~~~~l~~~~n~~~c~ 331 (736)
++ +|+.++.+++|+.|+|++|.|+ .+|..+. ..+..+.+.+|+..|+
T Consensus 204 ~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 204 AF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCc
Confidence 64 3334666666666666666666 3555442 2345566666666654
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.52 E-value=1.4e-15 Score=161.10 Aligned_cols=181 Identities=20% Similarity=0.174 Sum_probs=130.4
Q ss_pred ccceeEEEeeccCCC-CCCCccchhhhhhhhccCCCCchHHHHHHHHHHc-CCCCcCCCCCCCCCCCCCceEEe-cCCCC
Q 004689 146 LPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLY-SSADWAQEGGDPCLPVPWSWLQC-NSDPQ 222 (736)
Q Consensus 146 l~~l~~l~l~~~~~s-~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~-~~~~w~~~~~dpc~~~~~~~v~c-~~~~~ 222 (736)
++.+..|.++.|.++ .+|..+..+..++.|.++.|.+.+.....+.... .+..-... -| ...+... ....+
T Consensus 124 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~---~N---~l~~~~~~~~~~l 197 (313)
T 1ogq_A 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS---RN---RLTGKIPPTFANL 197 (313)
T ss_dssp CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECC---SS---EEEEECCGGGGGC
T ss_pred CCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECc---CC---eeeccCChHHhCC
Confidence 456677777777777 4555577777777777777665321111111111 01100000 00 0000000 01112
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
.|+.|+|++|.+++.+|..|..+++|+.|+|++|++++.+|.+..+++|++|+|++|+|+|.+|..+.++++|+.|+|+
T Consensus 198 -~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 276 (313)
T 1ogq_A 198 -NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS 276 (313)
T ss_dssp -CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECC
T ss_pred -cccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECc
Confidence 3899999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred cccCcCCCCccc-ccccccccccCCcccccCC
Q 004689 303 NNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 303 ~N~l~g~~P~~~-~~~~~~l~~~~n~~~c~~~ 333 (736)
+|+++|.+|..- +..+..+.+.+|+.+|+.+
T Consensus 277 ~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 277 FNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp SSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred CCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 999999999862 3455788999999999864
No 262
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.51 E-value=5.8e-14 Score=146.97 Aligned_cols=155 Identities=23% Similarity=0.260 Sum_probs=126.1
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.|+.|.++.+++. ..+..++.|.++.|.+.. ++. ....+++|
T Consensus 54 l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~~-----------l~~-------------------~~~~l~~L 102 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQS-----------LPL-------------------LGQTLPAL 102 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCSS-----------CCC-------------------CTTTCTTC
T ss_pred CCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCCc-----------Cch-------------------hhccCCCC
Confidence 45677788888888877765 566667777777766541 110 01245789
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
+.|+|++|+|++..|..|..+++|++|+|++|+|++.++ .|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|
T Consensus 103 ~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N 182 (290)
T 1p9a_G 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (290)
T ss_dssp CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC
Confidence 999999999997666789999999999999999999887 4789999999999999999666667789999999999999
Q ss_pred cCcCCCCcccccc--cccccccCCcccccC
Q 004689 305 MLSGTVPSSLLSK--NVVLNYAGNINLHEG 332 (736)
Q Consensus 305 ~l~g~~P~~~~~~--~~~l~~~~n~~~c~~ 332 (736)
+|+ .+|..++.. +..+.+.+|++.|.+
T Consensus 183 ~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 183 SLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred cCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 999 899988654 467889999999976
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.51 E-value=6.7e-14 Score=143.18 Aligned_cols=157 Identities=18% Similarity=0.184 Sum_probs=129.0
Q ss_pred cceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 147 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
+.+..|.|+.|.++.++|. +..+..++.|.++.|.+.. ..+- ....+++|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~~L 85 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-------------------LSAG----------VFDDLTEL 85 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc-------------------cCHh----------HhccCCcC
Confidence 3567899999999999885 7888888889888887652 1110 01235789
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
+.|+|++|+|++..+..|..+++|++|+|++|+|++.++. |.++++|++|+|++|+|++..|..|+.+++|+.|+|++|
T Consensus 86 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 165 (251)
T 3m19_A 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC
Confidence 9999999999977777889999999999999999988884 789999999999999999777778999999999999999
Q ss_pred cCcCCCCccc--ccccccccccCCcccccC
Q 004689 305 MLSGTVPSSL--LSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 305 ~l~g~~P~~~--~~~~~~l~~~~n~~~c~~ 332 (736)
+|++..|..+ +..+..+.+.+|+..|..
T Consensus 166 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 166 QLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred cCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 9995444444 245678899999999873
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.50 E-value=3.1e-14 Score=142.70 Aligned_cols=152 Identities=17% Similarity=0.167 Sum_probs=121.2
Q ss_pred EEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceEEEEc
Q 004689 151 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 230 (736)
Q Consensus 151 ~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~~L~L 230 (736)
.+.++.|.++.+|+.+.. .++.|.++.|.+.. ..+- . ....+++|+.|+|
T Consensus 15 ~l~~s~n~l~~iP~~~~~--~~~~L~L~~N~l~~-------------------~~~~-----~----~~~~l~~L~~L~L 64 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIPQ--YTAELRLNNNEFTV-------------------LEAT-----G----IFKKLPQLRKINF 64 (220)
T ss_dssp EEECCSSCCSSCCSCCCT--TCSEEECCSSCCCE-------------------ECCC-----C----CGGGCTTCCEEEC
T ss_pred EeEeCCCCcccCccCCCC--CCCEEEcCCCcCCc-------------------cCch-----h----hhccCCCCCEEEC
Confidence 577888888888876533 23566666665541 0010 0 0123578999999
Q ss_pred cCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCC
Q 004689 231 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 309 (736)
Q Consensus 231 ~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 309 (736)
++|+|++..+..|.++++|++|+|++|+|++.++ .|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.
T Consensus 65 ~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 144 (220)
T 2v70_A 65 SNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTV 144 (220)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCB
T ss_pred CCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEE
Confidence 9999998777789999999999999999999888 589999999999999999988899999999999999999999976
Q ss_pred CCcccc--cccccccccCCcccccC
Q 004689 310 VPSSLL--SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 310 ~P~~~~--~~~~~l~~~~n~~~c~~ 332 (736)
.|..+. ..+..+.+.+|+..|..
T Consensus 145 ~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 145 APGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CHHHhcCCCCCCEEEecCcCCcCCC
Confidence 676663 35578899999999876
No 265
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.50 E-value=5.7e-14 Score=140.76 Aligned_cols=151 Identities=21% Similarity=0.198 Sum_probs=120.3
Q ss_pred EEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceEEEEc
Q 004689 151 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 230 (736)
Q Consensus 151 ~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~~L~L 230 (736)
.+.+..+.++.+|+.+. +.++.|.++.|.+.. ..+- ....+++|+.|+|
T Consensus 15 ~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~-------------------i~~~----------~~~~l~~L~~L~L 63 (220)
T 2v9t_B 15 IVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKV-------------------IPPG----------AFSPYKKLRRIDL 63 (220)
T ss_dssp EEECTTSCCSSCCSSCC--TTCCEEECCSSCCCE-------------------ECTT----------SSTTCTTCCEEEC
T ss_pred EEEcCCCCcCcCCCccC--cCCCEEECCCCcCCC-------------------cCHh----------HhhCCCCCCEEEC
Confidence 35667777888877554 455666666665541 0000 0123578999999
Q ss_pred cCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCC
Q 004689 231 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 309 (736)
Q Consensus 231 ~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 309 (736)
++|+|++..|..|.+|++|++|+|++|+|++.++. |.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.
T Consensus 64 s~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 143 (220)
T 2v9t_B 64 SNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 143 (220)
T ss_dssp CSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEE
Confidence 99999988899999999999999999999988774 78999999999999999998899999999999999999999954
Q ss_pred CCccc--ccccccccccCCcccccC
Q 004689 310 VPSSL--LSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 310 ~P~~~--~~~~~~l~~~~n~~~c~~ 332 (736)
.|..+ +..+..+.+.+|++.|.+
T Consensus 144 ~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 144 AKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 44434 234578899999999976
No 266
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.48 E-value=2.8e-13 Score=140.16 Aligned_cols=158 Identities=19% Similarity=0.140 Sum_probs=128.4
Q ss_pred ccceeEEEeeccCCCCCCCcc-chhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 146 LPFVLSFKFGKTYDSSRGPLL-NAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~i-n~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
++.+..|.++.|.++.+|+.+ ..+..++.|.++.+.+.. -.+. ....+++
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~-------------------~~~~----------~~~~l~~ 110 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA-------------------LPIG----------VFDQLVN 110 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCC-------------------CCTT----------TTTTCSS
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCc-------------------CCHh----------HcccccC
Confidence 457788888888888888764 667778888877776541 0110 0123568
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
|+.|+|++|++++..|..|..+++|++|+|++|++++.++ .|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 111 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (270)
T 2o6q_A 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDN 190 (270)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCC
Confidence 9999999999998777788999999999999999999887 489999999999999999987777899999999999999
Q ss_pred ccCcCCCCcccc---cccccccccCCcccccCC
Q 004689 304 NMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 304 N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~~ 333 (736)
|+++ .+|...+ ..+..+.+.+|++.|.+.
T Consensus 191 N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 191 NQLK-RVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp SCCS-CCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CcCC-cCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9999 5666543 345788999999999863
No 267
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.47 E-value=5.9e-14 Score=137.52 Aligned_cols=122 Identities=24% Similarity=0.297 Sum_probs=106.4
Q ss_pred CCceEEecCCCC--------CceEEEEccCCCCCccCCc-ccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCC
Q 004689 211 PWSWLQCNSDPQ--------PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDN 280 (736)
Q Consensus 211 ~~~~v~c~~~~~--------~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N 280 (736)
.|..+.|+...+ .+|+.|+|++|+|++..+. .|..+++|++|+|++|+|++.+| .|.++++|++|+|++|
T Consensus 9 ~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 9 EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 466788875542 4899999999999966654 48999999999999999999988 7999999999999999
Q ss_pred CCCCCCCccccCccccceeecccccCcCCCCcccc--cccccccccCCcccccC
Q 004689 281 QLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 281 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~--~~~~~l~~~~n~~~c~~ 332 (736)
+|++..|..|.++++|+.|+|++|+|++.+|..+. ..+..+.+.+|+..|..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 99998888899999999999999999988787763 45678899999999875
No 268
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.47 E-value=1e-13 Score=135.88 Aligned_cols=119 Identities=23% Similarity=0.285 Sum_probs=104.9
Q ss_pred CceEEecCCC--------CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCC
Q 004689 212 WSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQL 282 (736)
Q Consensus 212 ~~~v~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l 282 (736)
+..+.|+... .++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+ .|.++++|++|+|++|+|
T Consensus 12 ~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 12 DTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 5567786543 257999999999999 899999999999999999999999888 699999999999999999
Q ss_pred CCCCCccccCccccceeecccccCcCCCCcccc---cccccccccCCcccccC
Q 004689 283 TGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 283 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~ 332 (736)
++..|..|.++++|+.|+|++|+|+ .+|...+ ..+..+.+.+|++.|.+
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeecCC
Confidence 9888889999999999999999999 6666543 35578899999999976
No 269
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.46 E-value=2.7e-13 Score=140.48 Aligned_cols=158 Identities=19% Similarity=0.133 Sum_probs=124.5
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.+ +.+..+..++.|.++.+.+.. ..+- ....+++|
T Consensus 62 l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~~L 111 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQS-------------------LPNG----------VFDKLTNL 111 (272)
T ss_dssp CTTCCEEECTTSCCCCC-GGGTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCCcEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc-------------------cChh----------HhcCCcCC
Confidence 45677788888887776 356666667777777665541 1110 01235789
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
+.|+|++|++++..+..+..+++|++|+|++|++++.++. +.++++|++|+|++|+|++..|..++.+++|+.|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 9999999999977777789999999999999999988884 789999999999999999888888899999999999999
Q ss_pred cCcCCCCccc--ccccccccccCCcccccCC
Q 004689 305 MLSGTVPSSL--LSKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 305 ~l~g~~P~~~--~~~~~~l~~~~n~~~c~~~ 333 (736)
++++..|..+ +..+..+.+.+|+..|..+
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9996555443 3456788999999888764
No 270
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.46 E-value=2e-14 Score=171.07 Aligned_cols=83 Identities=27% Similarity=0.419 Sum_probs=64.1
Q ss_pred ccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCCCCccccc--cccccc
Q 004689 246 LSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLS--KNVVLN 322 (736)
Q Consensus 246 l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~~--~~~~l~ 322 (736)
+++|+.|||++|+++|.+| .+++|+.|+.|+|++|+|+|.+|..+++|++|+.|+|++|+++|.+|..+.. .+..++
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 4667778888888888777 6788888888888888888888888888888888888888888888877643 446677
Q ss_pred ccCCcc
Q 004689 323 YAGNIN 328 (736)
Q Consensus 323 ~~~n~~ 328 (736)
+++|..
T Consensus 711 ls~N~l 716 (768)
T 3rgz_A 711 LSNNNL 716 (768)
T ss_dssp CCSSEE
T ss_pred CcCCcc
Confidence 777743
No 271
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.45 E-value=6.5e-14 Score=137.22 Aligned_cols=153 Identities=18% Similarity=0.160 Sum_probs=120.2
Q ss_pred EEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceEEEEc
Q 004689 151 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 230 (736)
Q Consensus 151 ~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~~L~L 230 (736)
.+.++.+.+..+|..+.. .++.|.++.|.+.. ..+- . ....+++|+.|+|
T Consensus 12 ~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~-------------------~~~~-----~----~~~~l~~L~~L~L 61 (192)
T 1w8a_A 12 TVDCTGRGLKEIPRDIPL--HTTELLLNDNELGR-------------------ISSD-----G----LFGRLPHLVKLEL 61 (192)
T ss_dssp EEECTTSCCSSCCSCCCT--TCSEEECCSCCCCS-------------------BCCS-----C----SGGGCTTCCEEEC
T ss_pred EEEcCCCCcCcCccCCCC--CCCEEECCCCcCCc-------------------cCCc-----c----ccccCCCCCEEEC
Confidence 477788888888876543 55667776665541 0000 0 0124578999999
Q ss_pred cCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCC
Q 004689 231 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 309 (736)
Q Consensus 231 ~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 309 (736)
++|+|++..|..|.++++|++|+|++|+|++.++ .|.++++|++|+|++|+|++.+|..+..+++|+.|+|++|.+++.
T Consensus 62 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 62 KRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9999999889999999999999999999999988 589999999999999999999999999999999999999999988
Q ss_pred CCcccccc-cccccccCCcccccCC
Q 004689 310 VPSSLLSK-NVVLNYAGNINLHEGG 333 (736)
Q Consensus 310 ~P~~~~~~-~~~l~~~~n~~~c~~~ 333 (736)
.+...+.. .....+.++...|..+
T Consensus 142 c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 142 CHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp GGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcchHHHHHHHHcCCCCCCCCCCCC
Confidence 87544322 2333556666677664
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.45 E-value=3.7e-14 Score=151.26 Aligned_cols=179 Identities=15% Similarity=0.170 Sum_probs=121.3
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCc-----CCCCCCCCCCCCCceEEe--c
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADW-----AQEGGDPCLPVPWSWLQC--N 218 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w-----~~~~~dpc~~~~~~~v~c--~ 218 (736)
++.+..|.|+.|.++.+|..+..+..++.|.++.|.+... -..+..+..+... +..+.-|- ....... .
T Consensus 103 l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~l-p~~l~~l~~L~~L~L~~n~~~~~~p~---~~~~~~~~~~ 178 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRAL-PASIASLNRLRELSIRACPELTELPE---PLASTDASGE 178 (328)
T ss_dssp GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCC-CGGGGGCTTCCEEEEEEETTCCCCCS---CSEEEC-CCC
T ss_pred CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccC-cHHHhcCcCCCEEECCCCCCccccCh---hHhhccchhh
Confidence 4566777777777777777777777777777666655310 0011111111110 00001111 1110000 0
Q ss_pred CCCCCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccce
Q 004689 219 SDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 298 (736)
Q Consensus 219 ~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 298 (736)
...+++|+.|+|++|+|+ .+|..+.++++|++|+|++|++++.++.+.++++|++|+|++|++.+.+|..++++++|+.
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 012568899999999998 8888899999999999999999987678888999999999999998899999999999999
Q ss_pred eecccccCcCCCCcccc--cccccccccCCccc
Q 004689 299 LYVQNNMLSGTVPSSLL--SKNVVLNYAGNINL 329 (736)
Q Consensus 299 L~l~~N~l~g~~P~~~~--~~~~~l~~~~n~~~ 329 (736)
|+|++|++.+.+|..+. ..+..+.+.+|...
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 99999988888888764 34567777777554
No 273
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.43 E-value=4.1e-13 Score=135.41 Aligned_cols=149 Identities=22% Similarity=0.174 Sum_probs=117.7
Q ss_pred EEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceEEEEc
Q 004689 151 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 230 (736)
Q Consensus 151 ~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~~L~L 230 (736)
.+..+.+.+..+|+.+. ..++.|.++.|.+.. ..|- ....+++|+.|+|
T Consensus 23 ~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~-------------------~~~~----------~~~~l~~L~~L~L 71 (229)
T 3e6j_A 23 TVDCRSKRHASVPAGIP--TNAQILYLHDNQITK-------------------LEPG----------VFDSLINLKELYL 71 (229)
T ss_dssp EEECTTSCCSSCCSCCC--TTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCCEEEC
T ss_pred EeEccCCCcCccCCCCC--CCCCEEEcCCCccCc-------------------cCHH----------HhhCccCCcEEEC
Confidence 36677788888887554 556677777776652 1110 0123578999999
Q ss_pred cCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCC
Q 004689 231 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 309 (736)
Q Consensus 231 ~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 309 (736)
++|+|++..+..|..+++|+.|+|++|+|++.++ .|.++++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .
T Consensus 72 ~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 149 (229)
T 3e6j_A 72 GSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-S 149 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-C
T ss_pred CCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-c
Confidence 9999985444567899999999999999998887 4789999999999999999 88999999999999999999999 5
Q ss_pred CCcccc---cccccccccCCcccccC
Q 004689 310 VPSSLL---SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 310 ~P~~~~---~~~~~l~~~~n~~~c~~ 332 (736)
+|...+ ..+..+.+.+|+..|.+
T Consensus 150 ~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 150 IPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred cCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 555443 35578889999999875
No 274
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.42 E-value=4.7e-14 Score=150.38 Aligned_cols=142 Identities=21% Similarity=0.256 Sum_probs=118.9
Q ss_pred CCchHHHHHHHHHHcC------CCCcC---CCCCCCCCCCCCceEEecC-------CCCCceEEEEccCCCCCccCCccc
Q 004689 180 GSIDGVAIVSVISLYS------SADWA---QEGGDPCLPVPWSWLQCNS-------DPQPSITVIHLSSKNLTGNIPSDL 243 (736)
Q Consensus 180 ~~~~~~al~~l~~~~~------~~~w~---~~~~dpc~~~~~~~v~c~~-------~~~~~l~~L~L~~n~l~g~~p~~~ 243 (736)
...+..||.+||..+. +..|. ...+++| .|.|+.|.. ...++|+.|+|++|+|+ .+|+.+
T Consensus 25 ~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~---~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 25 LRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE---TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC---CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred CchHHHHHHHHHHhccCCchhhhhhhccccccccccc---ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 3457899999999774 24673 3457778 599999852 23578999999999999 899999
Q ss_pred ccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCCCCccc--------
Q 004689 244 TKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL-------- 314 (736)
Q Consensus 244 ~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~-------- 314 (736)
++|++|++|+|++|.++ .+| .++++++|++|+|++|.|+ .+|..++++++|+.|+|++|++.|.+|..+
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 555 7999999999999999999 899999999999999999999999999887
Q ss_pred ---ccccccccccCCc
Q 004689 315 ---LSKNVVLNYAGNI 327 (736)
Q Consensus 315 ---~~~~~~l~~~~n~ 327 (736)
+..+..+.+.+|.
T Consensus 179 ~~~l~~L~~L~L~~n~ 194 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTG 194 (328)
T ss_dssp EEESTTCCEEEEEEEC
T ss_pred hccCCCCCEEECcCCC
Confidence 3344566666663
No 275
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.41 E-value=3e-13 Score=135.49 Aligned_cols=137 Identities=18% Similarity=0.193 Sum_probs=116.8
Q ss_pred eeEEEeeccCCCCCCCc--cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 149 VLSFKFGKTYDSSRGPL--LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 149 l~~l~l~~~~~s~lpP~--in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
+..|.|+.|.++.++|. +..+..++.|.++.|.+.. -.+- ....+++|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~-------------------i~~~----------~~~~l~~L~ 84 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD-------------------IEEG----------AFEGASGVN 84 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCE-------------------ECTT----------TTTTCTTCC
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCE-------------------ECHH----------HhCCCCCCC
Confidence 35789999999999764 7888889999998887752 1110 012357899
Q ss_pred EEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 227 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
.|+|++|.|++..|..|..+++|++|+|++|+|++.+| .|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.
T Consensus 85 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 164 (220)
T 2v70_A 85 EILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANP 164 (220)
T ss_dssp EEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcC
Confidence 99999999998777789999999999999999999988 68999999999999999999889999999999999999999
Q ss_pred CcCCCCccc
Q 004689 306 LSGTVPSSL 314 (736)
Q Consensus 306 l~g~~P~~~ 314 (736)
+++..+...
T Consensus 165 l~c~c~l~~ 173 (220)
T 2v70_A 165 FNCNCYLAW 173 (220)
T ss_dssp EECSGGGHH
T ss_pred CcCCCchHH
Confidence 998776443
No 276
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.41 E-value=5.5e-13 Score=134.41 Aligned_cols=123 Identities=24% Similarity=0.307 Sum_probs=106.5
Q ss_pred CCCCCCCCCCceEEecCCC--------CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCc
Q 004689 203 GGDPCLPVPWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLR 273 (736)
Q Consensus 203 ~~dpc~~~~~~~v~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~ 273 (736)
..+.| .|..|.|+... .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.++ .|.++++|+
T Consensus 15 ~~~~C---s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 15 SQCSC---SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp TTCEE---ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCEE---eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcC
Confidence 36778 58999998654 3579999999999998889999999999999999999988777 479999999
Q ss_pred EEEcCCCCCCCCCCccccCccccceeecccccCcCCCCcccc--cccccccccCCccc
Q 004689 274 IIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNINL 329 (736)
Q Consensus 274 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~--~~~~~l~~~~n~~~ 329 (736)
+|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+. ..+..+.+.+|...
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 148 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK 148 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC
Confidence 9999999999777778899999999999999999 8998874 34567788888543
No 277
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.40 E-value=7.1e-13 Score=127.80 Aligned_cols=121 Identities=24% Similarity=0.271 Sum_probs=103.7
Q ss_pred CCceEEecCCC--------CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCC
Q 004689 211 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 281 (736)
Q Consensus 211 ~~~~v~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~ 281 (736)
.|..+.|+... .++|+.|+|++|++++..+..+..+++|++|+|++|++++.++. +.++++|++|+|++|+
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 57788887554 35899999999999976666789999999999999999988874 7999999999999999
Q ss_pred CCCCCCccccCccccceeecccccCcCCCCcccc---cccccccccCCcccccC
Q 004689 282 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 282 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~ 332 (736)
|++..+..+.++++|+.|+|++|+++ .+|...+ ..+..+.+.+|+..|..
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99877778899999999999999999 6666553 34578889999888754
No 278
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.40 E-value=1.5e-13 Score=152.67 Aligned_cols=180 Identities=19% Similarity=0.173 Sum_probs=133.4
Q ss_pred ccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEe-cCCCCC
Q 004689 146 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 223 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c-~~~~~~ 223 (736)
++.+..|.|+.|.++.+|+. +..+..|+.|.++.|.+....-..+.....+......+ |. ....+.- ....++
T Consensus 111 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~---~~--~l~~i~~~~~~~l~ 185 (440)
T 3zyj_A 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGE---LK--RLSYISEGAFEGLS 185 (440)
T ss_dssp CSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCC---CT--TCCEECTTTTTTCS
T ss_pred CccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCC---CC--CcceeCcchhhccc
Confidence 56788899999999998884 78888888888888766421100111111111111000 00 0011110 123467
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.|+|++|+|+ .+| .+..+++|+.|+|++|++++..| .|.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 186 ~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 263 (440)
T 3zyj_A 186 NLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 263 (440)
T ss_dssp SCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECT
T ss_pred ccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECC
Confidence 9999999999999 677 48999999999999999999888 79999999999999999999889999999999999999
Q ss_pred cccCcCCCCcccc---cccccccccCCcccccCC
Q 004689 303 NNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 303 ~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~~ 333 (736)
+|+|+ .+|...+ ..+..+.+.+|++.|.+.
T Consensus 264 ~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 264 HNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TSCCC-CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCCC-ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 99999 5665554 345788999999999873
No 279
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.39 E-value=5e-13 Score=139.27 Aligned_cols=158 Identities=19% Similarity=0.231 Sum_probs=123.9
Q ss_pred ccceeEEEeeccC-CCCCCC-ccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 146 LPFVLSFKFGKTY-DSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 146 l~~l~~l~l~~~~-~s~lpP-~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
++.+..|.++.|. +..++| .+..+..++.|.++.+.+.. ..|- ....++
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------~~~~----------~~~~l~ 129 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE-------------------LGPG----------LFRGLA 129 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCT
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCE-------------------ECHh----------HhhCCc
Confidence 4567777777776 777744 36666777777776665531 1111 012357
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.|+|++|++++..+..+..+++|++|+|++|++++.++ .+.++++|++|+|++|.+++..|..+.++++|+.|+|+
T Consensus 130 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 209 (285)
T 1ozn_A 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209 (285)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCC
Confidence 89999999999997666679999999999999999998887 58999999999999999999889999999999999999
Q ss_pred cccCcCCCCccc--ccccccccccCCcccccC
Q 004689 303 NNMLSGTVPSSL--LSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 303 ~N~l~g~~P~~~--~~~~~~l~~~~n~~~c~~ 332 (736)
+|.+++..|..+ +..+..+.+.+|+..|..
T Consensus 210 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 210 ANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp SSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCcCCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 999995443334 244578899999999876
No 280
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.39 E-value=3.7e-13 Score=141.72 Aligned_cols=112 Identities=19% Similarity=0.182 Sum_probs=99.9
Q ss_pred CCCceEEEEccCCCCCc-cCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccce
Q 004689 221 PQPSITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 298 (736)
Q Consensus 221 ~~~~l~~L~L~~n~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 298 (736)
.+++|+.|+|++|.+++ .+|..+..+++|++|+|++|++++.+| .+.++++|++|+|++|+|++..+..+..+++|+.
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 35789999999999997 688899999999999999999999877 6899999999999999999877778999999999
Q ss_pred eecccccCcCCCCccccc---ccccccccCCcccccC
Q 004689 299 LYVQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEG 332 (736)
Q Consensus 299 L~l~~N~l~g~~P~~~~~---~~~~l~~~~n~~~c~~ 332 (736)
|+|++|++++..|..+.. .+..+.+.+|+..|.+
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 999999999888877643 4578899999988875
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.39 E-value=1.2e-12 Score=133.72 Aligned_cols=137 Identities=15% Similarity=0.131 Sum_probs=116.2
Q ss_pred cccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 145 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
.++.+..|.|+.|.++.++|. +..+..++.|.++.|.+.. -.+. ....++
T Consensus 57 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~ 107 (251)
T 3m19_A 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-------------------LPLG----------VFDHLT 107 (251)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCT
T ss_pred CcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccc-------------------cChh----------HhcccC
Confidence 356888999999999999886 7888889999998887651 1111 012357
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.|+|++|+|++..+..|..+++|++|+|++|+|++.++ .|.++++|++|+|++|+|++..|..+..+++|+.|+|+
T Consensus 108 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 187 (251)
T 3m19_A 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLF 187 (251)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 99999999999996666667899999999999999999888 68999999999999999998888899999999999999
Q ss_pred cccCcCCC
Q 004689 303 NNMLSGTV 310 (736)
Q Consensus 303 ~N~l~g~~ 310 (736)
+|.+++..
T Consensus 188 ~N~~~c~~ 195 (251)
T 3m19_A 188 GNQFDCSR 195 (251)
T ss_dssp SCCBCTTS
T ss_pred CCceeCCc
Confidence 99999763
No 282
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.37 E-value=9.2e-13 Score=137.82 Aligned_cols=108 Identities=27% Similarity=0.307 Sum_probs=95.5
Q ss_pred CCCCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccce
Q 004689 220 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 298 (736)
Q Consensus 220 ~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 298 (736)
..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++.+| .|.++++|++|+|++|+|++..+..|..+++|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 34679999999999999 799999999999999999999999887 6899999999999999999877778899999999
Q ss_pred eecccccCcCCCCccccc---ccccccccCCccc
Q 004689 299 LYVQNNMLSGTVPSSLLS---KNVVLNYAGNINL 329 (736)
Q Consensus 299 L~l~~N~l~g~~P~~~~~---~~~~l~~~~n~~~ 329 (736)
|+|++|+|+ .+|...+. .+..+.+.+|...
T Consensus 153 L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 153 LSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp EECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred EECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 999999999 77776644 4567788888544
No 283
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.36 E-value=6.3e-13 Score=143.63 Aligned_cols=153 Identities=20% Similarity=0.141 Sum_probs=121.3
Q ss_pred eeEEEeeccCCCCCCCcc-c-hhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 149 VLSFKFGKTYDSSRGPLL-N-AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 149 l~~l~l~~~~~s~lpP~i-n-~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
+..|.|+.|.++.+++.+ . .+..|+.|.++.|.+.. -.+- ....+++|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~-------------------i~~~----------~~~~l~~L~ 91 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNF-------------------ISSE----------AFVPVPNLR 91 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCE-------------------ECTT----------TTTTCTTCC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCc-------------------cChh----------hccCCCCCC
Confidence 566899999999998874 3 77888888888877641 0010 012457899
Q ss_pred EEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCcc-c---cCccccceeec
Q 004689 227 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSS-L---MNLPNLRELYV 301 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~-~---~~l~~L~~L~l 301 (736)
.|+|++|+|++..+..|..|++|+.|+|++|+|++..| .|.++++|++|+|++|+|++ +|.. + ..+++|+.|+|
T Consensus 92 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L 170 (361)
T 2xot_A 92 YLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDL 170 (361)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEEC
T ss_pred EEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEEC
Confidence 99999999997777789999999999999999999887 79999999999999999995 5554 4 67999999999
Q ss_pred ccccCcCCCCccccccc-----ccccccCCcccccC
Q 004689 302 QNNMLSGTVPSSLLSKN-----VVLNYAGNINLHEG 332 (736)
Q Consensus 302 ~~N~l~g~~P~~~~~~~-----~~l~~~~n~~~c~~ 332 (736)
++|+|+ .+|...+... ..+.+.+|++.|.+
T Consensus 171 ~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 171 SSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CCCCCC-ccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 999999 6665443332 45889999999976
No 284
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.36 E-value=9.5e-13 Score=126.22 Aligned_cols=104 Identities=24% Similarity=0.301 Sum_probs=81.8
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
.+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+| .|.++++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467888888888 5887764 788888888888888877 578888888888888888876666778888888888888
Q ss_pred ccCcCCCCcc-c--ccccccccccCCcccccC
Q 004689 304 NMLSGTVPSS-L--LSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 304 N~l~g~~P~~-~--~~~~~~l~~~~n~~~c~~ 332 (736)
|+|+ .+|.. + +..+..+.+.+|+..|..
T Consensus 88 N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLK-SIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccC-EeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8888 45544 3 234567888888888765
No 285
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.35 E-value=1.4e-12 Score=130.56 Aligned_cols=135 Identities=16% Similarity=0.155 Sum_probs=113.4
Q ss_pred cceeEEEeeccCCCCCCC-ccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 147 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP-~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
+.+..|.|+.|.++.+|| .+..+..++.|.++.|.+.. ..|- ....+++|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~-------------------~~~~----------~~~~l~~L 82 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE-------------------LAPD----------AFQGLRSL 82 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE-------------------ECTT----------TTTTCSSC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC-------------------cCHH----------HhhCCcCC
Confidence 467789999999999998 58888899999999887752 1110 01235799
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
+.|+|++|+|++..+..|..+++|+.|+|++|+|++..| .|.++++|++|+|++|+|++..+..+..+++|+.|+|++|
T Consensus 83 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 999999999995444457899999999999999999988 6899999999999999999888888999999999999999
Q ss_pred cCcCCC
Q 004689 305 MLSGTV 310 (736)
Q Consensus 305 ~l~g~~ 310 (736)
.+...-
T Consensus 163 ~~~c~c 168 (220)
T 2v9t_B 163 PFICDC 168 (220)
T ss_dssp CEECSG
T ss_pred CcCCCC
Confidence 997543
No 286
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.35 E-value=3.8e-13 Score=149.90 Aligned_cols=180 Identities=18% Similarity=0.190 Sum_probs=131.4
Q ss_pred ccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEe-cCCCCC
Q 004689 146 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 223 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c-~~~~~~ 223 (736)
++.+..|.|+.|.++.+|+. +..+..|+.|.++.|.+....-..+...-.+..-... + |. ....+.- ....++
T Consensus 122 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~--~-~~--~l~~i~~~~~~~l~ 196 (452)
T 3zyi_A 122 LASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLG--E-LK--KLEYISEGAFEGLF 196 (452)
T ss_dssp CTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECC--C-CT--TCCEECTTTTTTCT
T ss_pred cccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCC--C-CC--CccccChhhccCCC
Confidence 56778888888888888876 6777788888888776642100011111111111000 0 00 0011110 123467
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.|+|++|+|++ +| .+..+++|+.|+|++|++++..| .|.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 197 ~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 274 (452)
T 3zyi_A 197 NLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLA 274 (452)
T ss_dssp TCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECC
Confidence 99999999999994 55 58999999999999999999888 69999999999999999999899999999999999999
Q ss_pred cccCcCCCCcccc---cccccccccCCcccccCC
Q 004689 303 NNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 303 ~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~~ 333 (736)
+|+|+ .+|...+ ..+..+.+.+|++.|.+.
T Consensus 275 ~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 275 HNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp SSCCS-CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCcCC-ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99999 5665553 445788999999999874
No 287
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.34 E-value=2.9e-12 Score=132.62 Aligned_cols=139 Identities=19% Similarity=0.159 Sum_probs=117.2
Q ss_pred cccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 145 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
.++.+..|.++.|.++.++|. +..+..++.|.++.+.+.. -.+. ....++
T Consensus 83 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~ 133 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-------------------LPDG----------VFDKLT 133 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCT
T ss_pred CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCc-------------------cCHH----------HhccCC
Confidence 356888999999999999987 5888888889888886641 1110 012356
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.|+|++|++++..+..+..+++|+.|+|++|++++.++. +.++++|++|+|++|+|++..|..++++++|+.|+|+
T Consensus 134 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (272)
T 3rfs_A 134 NLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLH 213 (272)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEcc
Confidence 899999999999976666789999999999999999988884 7899999999999999998888889999999999999
Q ss_pred cccCcCCCCc
Q 004689 303 NNMLSGTVPS 312 (736)
Q Consensus 303 ~N~l~g~~P~ 312 (736)
+|.++|..|.
T Consensus 214 ~N~~~~~~~~ 223 (272)
T 3rfs_A 214 DNPWDCTCPG 223 (272)
T ss_dssp SSCBCCCTTT
T ss_pred CCCccccCcH
Confidence 9999988773
No 288
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.34 E-value=7.8e-13 Score=152.91 Aligned_cols=182 Identities=13% Similarity=0.007 Sum_probs=138.5
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHH-HHHHHHcCCCCcCCCCCCCCCCCCCceEE-ecCCCC
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQ 222 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al-~~l~~~~~~~~w~~~~~dpc~~~~~~~v~-c~~~~~ 222 (736)
.++.+..|.++.|.++.+|+.+..+..++.|.++.+.+..... ..+...-.+..-... -| ...... -....+
T Consensus 374 ~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~---~n---~l~~~~~~~~~~l 447 (606)
T 3vq2_A 374 GTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDIS---YT---NTKIDFDGIFLGL 447 (606)
T ss_dssp CCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECT---TS---CCEECCTTTTTTC
T ss_pred cCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECc---CC---CCCccchhhhcCC
Confidence 4567889999999999999888888889999888877643110 111111111111000 00 000000 012345
Q ss_pred CceEEEEccCCCCCcc-CCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceee
Q 004689 223 PSITVIHLSSKNLTGN-IPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 300 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 300 (736)
++|+.|+|++|.+++. +|..+..+++|+.|+|++|++++.+| .+.++++|++|+|++|++++.+|..++++++|+.|+
T Consensus 448 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 527 (606)
T 3vq2_A 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLD 527 (606)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEE
Confidence 7999999999999984 78899999999999999999999988 689999999999999999998899999999999999
Q ss_pred cccccCcCCCCccccc---ccccccccCCcccccCC
Q 004689 301 VQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 333 (736)
Q Consensus 301 l~~N~l~g~~P~~~~~---~~~~l~~~~n~~~c~~~ 333 (736)
|++|+|+ .+|..+.. .+..+.+.+|+..|.++
T Consensus 528 l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 528 CSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999 88887643 35788999999999874
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.33 E-value=3.1e-12 Score=142.36 Aligned_cols=112 Identities=21% Similarity=0.227 Sum_probs=94.3
Q ss_pred CCCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCcccccee
Q 004689 221 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 299 (736)
Q Consensus 221 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 299 (736)
.+++|+.|+|++|++++..|..|.++++|++|+|++|++++.+| .+.++++|++|+|++|+|++..|..+.++++|+.|
T Consensus 297 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 376 (455)
T 3v47_A 297 HFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKEL 376 (455)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEE
Confidence 35788999999999998888888899999999999999988877 57889999999999999998888899999999999
Q ss_pred ecccccCcCCCCcccc---cccccccccCCcccccCC
Q 004689 300 YVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 300 ~l~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~~ 333 (736)
+|++|+++ .+|...+ ..+..+.+.+|+..|..+
T Consensus 377 ~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 377 ALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp ECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999998 4665443 345778899999888764
No 290
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.33 E-value=1.1e-12 Score=128.93 Aligned_cols=150 Identities=15% Similarity=0.096 Sum_probs=117.9
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.++.+..|.++.|.++.+| -+..+..++.|.++.+.+.. +. ....+++
T Consensus 42 ~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~---------------------~~----------~l~~l~~ 89 (197)
T 4ezg_A 42 QMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATN---------------------YN----------PISGLSN 89 (197)
T ss_dssp HHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSC---------------------CG----------GGTTCTT
T ss_pred hcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCc---------------------ch----------hhhcCCC
Confidence 4567888999999999988 56777777777777664321 10 0123578
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
|+.|+|++|++++..|..+..|++|++|+|++|++++..| .++++++|++|+|++|.+.+.+| .+..+++|+.|++++
T Consensus 90 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~ 168 (197)
T 4ezg_A 90 LERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQF 168 (197)
T ss_dssp CCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTT
T ss_pred CCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCC
Confidence 9999999999998889999999999999999999998666 68999999999999998444666 699999999999999
Q ss_pred ccCcCCCCcccccccccccccCCc
Q 004689 304 NMLSGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 304 N~l~g~~P~~~~~~~~~l~~~~n~ 327 (736)
|.+++..+-.-+..+..+.+.+|.
T Consensus 169 n~i~~~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 169 DGVHDYRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp BCCCCCTTGGGCSSCCEEEECBC-
T ss_pred CCCcChHHhccCCCCCEEEeeCcc
Confidence 999953333334556777788875
No 291
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.33 E-value=4e-12 Score=125.85 Aligned_cols=135 Identities=19% Similarity=0.166 Sum_probs=71.6
Q ss_pred ceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 148 FVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 148 ~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
.+..|.++.|.++.+++. +..+..++.|.++.+.+.. -.+. ....+++|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L~ 79 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-------------------LPNG----------VFNKLTSLT 79 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc-------------------cChh----------hcCCCCCcC
Confidence 455667777776666654 4455555555555544321 0000 001234556
Q ss_pred EEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 227 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
.|+|++|+|++..+..+..+++|++|+|++|++++.++. +.++++|++|+|++|+|++..+..+..+++|+.|+|++|.
T Consensus 80 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 159 (208)
T 2o6s_A 80 YLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 159 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred EEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCC
Confidence 666666666543333455566666666666666655552 4556666666666666664444445555666666666655
Q ss_pred CcCCCC
Q 004689 306 LSGTVP 311 (736)
Q Consensus 306 l~g~~P 311 (736)
+.+..|
T Consensus 160 ~~~~~~ 165 (208)
T 2o6s_A 160 WDCTCP 165 (208)
T ss_dssp BCCCTT
T ss_pred eecCCC
Confidence 554443
No 292
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.33 E-value=6.9e-12 Score=124.12 Aligned_cols=149 Identities=21% Similarity=0.174 Sum_probs=114.2
Q ss_pred EEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceEEEEcc
Q 004689 152 FKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLS 231 (736)
Q Consensus 152 l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~~L~L~ 231 (736)
+....+.++.+|..+. ..++.|.++.+.+.. ..+- ....+++|+.|+|+
T Consensus 12 v~c~~~~l~~~p~~~~--~~l~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L~~L~l~ 60 (208)
T 2o6s_A 12 VECYSQGRTSVPTGIP--AQTTYLDLETNSLKS-------------------LPNG----------VFDELTSLTQLYLG 60 (208)
T ss_dssp EECCSSCCSSCCSCCC--TTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCSEEECC
T ss_pred EEecCCCccCCCCCCC--CCCcEEEcCCCccCc-------------------CChh----------hhcccccCcEEECC
Confidence 4556677777776543 356667777666541 0000 01235789999999
Q ss_pred CCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCCC
Q 004689 232 SKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTV 310 (736)
Q Consensus 232 ~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 310 (736)
+|++++..+..|..+++|++|+|++|++++.++. +.++++|++|+|++|+|++..+..+.++++|+.|+|++|+++ .+
T Consensus 61 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~ 139 (208)
T 2o6s_A 61 GNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SV 139 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CC
T ss_pred CCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-ee
Confidence 9999965555678999999999999999988774 789999999999999999777777899999999999999999 45
Q ss_pred Cccc---ccccccccccCCcccccC
Q 004689 311 PSSL---LSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 311 P~~~---~~~~~~l~~~~n~~~c~~ 332 (736)
|... +..+..+.+.+|+..|..
T Consensus 140 ~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 140 PDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CHHHhccCCCccEEEecCCCeecCC
Confidence 5543 345578889999888765
No 293
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.32 E-value=2.6e-12 Score=123.17 Aligned_cols=101 Identities=25% Similarity=0.314 Sum_probs=89.0
Q ss_pred CCceEEecCCC--------CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCC
Q 004689 211 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQ 281 (736)
Q Consensus 211 ~~~~v~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~ 281 (736)
.|..+.|+... .++|+.|+|++|+|++..|..|.+|++|++|+|++|+|++.++ .|.++++|++|+|++|+
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 35667776543 2579999999999998888899999999999999999999888 47899999999999999
Q ss_pred CCCCCCccccCccccceeecccccCcCCCC
Q 004689 282 LTGPLPSSLMNLPNLRELYVQNNMLSGTVP 311 (736)
Q Consensus 282 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P 311 (736)
|++..|..|.++++|+.|+|++|.+++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 997777789999999999999999986554
No 294
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.32 E-value=1.8e-12 Score=123.70 Aligned_cols=136 Identities=19% Similarity=0.150 Sum_probs=114.4
Q ss_pred ccceeEEEeeccCCC--CCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 146 LPFVLSFKFGKTYDS--SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 146 l~~l~~l~l~~~~~s--~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
.+.+..|.++.|.++ .+|+.+..+..++.|.++.+.+.. . + ....++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-------------------~-~-----------~~~~l~ 71 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-------------------V-S-----------NLPKLP 71 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-------------------C-S-----------SCCCCS
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-------------------h-h-----------hhccCC
Confidence 357888999999998 899888999999999888877652 0 0 112357
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCC--CCCCCCCCCcEEEcCCCCCCCCCC---ccccCccccce
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGPLP---SSLMNLPNLRE 298 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~ 298 (736)
+|+.|+|++|++++.+|..+.++++|++|+|++|.+++.. +.+.++++|++|+|++|.+++..+ ..+..+++|+.
T Consensus 72 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 151 (168)
T 2ell_A 72 KLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTY 151 (168)
T ss_dssp SCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCE
T ss_pred CCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcE
Confidence 8999999999999878888888999999999999999965 478999999999999999996555 48999999999
Q ss_pred eecccccCcCCCCcc
Q 004689 299 LYVQNNMLSGTVPSS 313 (736)
Q Consensus 299 L~l~~N~l~g~~P~~ 313 (736)
|++++|.+. .+|..
T Consensus 152 L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 152 LDGYDREDQ-EAPDS 165 (168)
T ss_dssp ETTEETTSC-BCCSS
T ss_pred ecCCCCChh-hcccc
Confidence 999999998 67654
No 295
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.31 E-value=2.5e-12 Score=149.63 Aligned_cols=109 Identities=22% Similarity=0.243 Sum_probs=99.6
Q ss_pred CCceEEEEccCCCCCccCCcccc--cccccccccccccccCCCCCCCCCCCCCcEEEc------CCCCCCCCCCccccCc
Q 004689 222 QPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHL------EDNQLTGPLPSSLMNL 293 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L------s~N~l~g~~p~~~~~l 293 (736)
+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++.++.+.++++|++|+| ++|++.+.+|..++++
T Consensus 487 l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l 565 (636)
T 4eco_A 487 TYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLC 565 (636)
T ss_dssp GGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGC
T ss_pred cCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcC
Confidence 448999999999999 8999997 999999999999999994447899999999999 5688999999999999
Q ss_pred cccceeecccccCcCCCCcccccccccccccCCcccccC
Q 004689 294 PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 294 ~~L~~L~l~~N~l~g~~P~~~~~~~~~l~~~~n~~~c~~ 332 (736)
++|+.|+|++|++ +.+|..+...+..+.+++|+..|-.
T Consensus 566 ~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 566 PSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp SSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred CCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 9999999999999 6999999888899999999888744
No 296
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.31 E-value=4.2e-12 Score=132.21 Aligned_cols=154 Identities=16% Similarity=0.201 Sum_probs=115.0
Q ss_pred ccceeEEEeeccCCCCCCC-ccchhhhhhhhccCCCC-chHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 146 LPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGS-IDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP-~in~~e~~~~l~~~~~~-~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
++.+..|.++.|.++.++| .+..+..++.|.++.+. +.. -.|- ....++
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~-------------------~~~~----------~~~~l~ 105 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRS-------------------VDPA----------TFHGLG 105 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCC-------------------CCTT----------TTTTCT
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccc-------------------cCHH----------HhcCCc
Confidence 3456667777777766644 36666666666666554 220 1110 012357
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.|+|++|++++..|..+.++++|++|+|++|++++.++ .+.++++|++|+|++|+|++..+..+..+++|+.|+|+
T Consensus 106 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 185 (285)
T 1ozn_A 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185 (285)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECC
Confidence 89999999999998778889999999999999999998877 48889999999999999997666679999999999999
Q ss_pred cccCcCCCCcccc--cccccccccCCcc
Q 004689 303 NNMLSGTVPSSLL--SKNVVLNYAGNIN 328 (736)
Q Consensus 303 ~N~l~g~~P~~~~--~~~~~l~~~~n~~ 328 (736)
+|.+++..|..+. ..+..+.+.+|..
T Consensus 186 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l 213 (285)
T 1ozn_A 186 QNRVAHVHPHAFRDLGRLMTLYLFANNL 213 (285)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCcccccCHhHccCcccccEeeCCCCcC
Confidence 9999977777664 3456677777743
No 297
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.31 E-value=3.8e-12 Score=122.49 Aligned_cols=104 Identities=22% Similarity=0.329 Sum_probs=89.1
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
-+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+| .|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 368999999997 7898775 899999999999999988 689999999999999999976666678999999999999
Q ss_pred ccCcCCCCccc---ccccccccccCCcccccC
Q 004689 304 NMLSGTVPSSL---LSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 304 N~l~g~~P~~~---~~~~~~l~~~~n~~~c~~ 332 (736)
|+|+ .+|... +..+..+.+.+|+..|.+
T Consensus 91 N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred Cccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999 566653 345678889999998875
No 298
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.30 E-value=2.4e-12 Score=149.05 Aligned_cols=180 Identities=14% Similarity=0.081 Sum_probs=131.8
Q ss_pred ccccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchH----HHHHHHHHHcCCCCcCCCCCCCCCCCCCceE-Eec
Q 004689 144 LSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDG----VAIVSVISLYSSADWAQEGGDPCLPVPWSWL-QCN 218 (736)
Q Consensus 144 ~~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~----~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v-~c~ 218 (736)
..+..+..+.+..+....+++.+..+..++.+.+..+.... .++..+..... .. ...+ ....+ ...
T Consensus 394 ~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~---l~---ls~n---~l~~~~~~~ 464 (635)
T 4g8a_A 394 FGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY---LD---ISHT---HTRVAFNGI 464 (635)
T ss_dssp HSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCE---EE---CTTS---CCEECCTTT
T ss_pred hhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccc---cc---cccc---ccccccccc
Confidence 34566778888888888888887777777777666543321 00000000000 00 0000 00000 011
Q ss_pred CCCCCceEEEEccCCCC-CccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCcccc
Q 004689 219 SDPQPSITVIHLSSKNL-TGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL 296 (736)
Q Consensus 219 ~~~~~~l~~L~L~~n~l-~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 296 (736)
....+.++.|+|++|++ .+.+|..|..+++|++|+|++|+|++.+| .|.+|++|++|+|++|+|++..|..|.++++|
T Consensus 465 ~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 544 (635)
T 4g8a_A 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 544 (635)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTC
T ss_pred cccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCC
Confidence 23457899999999985 45678889999999999999999999988 69999999999999999999889999999999
Q ss_pred ceeecccccCcCCCCcccc---cccccccccCCcccccC
Q 004689 297 RELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 297 ~~L~l~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~ 332 (736)
+.|+|++|+|++..|..+. ..+..+.+.+|++.|.+
T Consensus 545 ~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 545 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp CEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9999999999988787764 34678899999999987
No 299
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.30 E-value=8.3e-12 Score=128.97 Aligned_cols=152 Identities=20% Similarity=0.193 Sum_probs=121.5
Q ss_pred ceeEEEeeccCCCCCCC-ccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 148 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 148 ~l~~l~l~~~~~s~lpP-~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
.+..|.|+.|.++.+|+ .+..+..++.|.++.+.+.. + .+- ....+++|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------i--------~~~----------~~~~l~~L~ 88 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-----------L--------PAG----------IFKELKNLE 88 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC-----------C--------CTT----------TTSSCTTCC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe-----------e--------Chh----------hhcCCCCCC
Confidence 56788999999999987 58888888888888876541 0 000 002357899
Q ss_pred EEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 227 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
.|+|++|++++..+..+..+++|++|+|++|++++..+ .|.++++|++|+|++|.|++..+..++.+++|+.|+|++|.
T Consensus 89 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp EEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCc
Confidence 99999999997666678899999999999999999888 58999999999999999997766779999999999999999
Q ss_pred CcCCCCcccc---cccccccccCCccc
Q 004689 306 LSGTVPSSLL---SKNVVLNYAGNINL 329 (736)
Q Consensus 306 l~g~~P~~~~---~~~~~l~~~~n~~~ 329 (736)
+++ +|...+ ..+..+.+.+|...
T Consensus 169 l~~-~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 169 LKR-VPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp CSC-CCTTTTTTCTTCCEEECCSSCCS
T ss_pred CcE-eChhHhccCCCcCEEECCCCcCC
Confidence 994 554433 34567778887433
No 300
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.29 E-value=5.7e-12 Score=150.22 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=98.0
Q ss_pred CCceEEEEccCCCCCccCCcccc--cccccccccccccccCCCCCCCCCCCCCcEEEcCC------CCCCCCCCccccCc
Q 004689 222 QPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLED------NQLTGPLPSSLMNL 293 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~------N~l~g~~p~~~~~l 293 (736)
+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++.++.+.+|++|+.|+|++ |++.+.+|..|++|
T Consensus 727 l~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L 805 (876)
T 4ecn_A 727 TYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTC 805 (876)
T ss_dssp GGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGC
T ss_pred cCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcC
Confidence 458999999999999 8999997 99999999999999999544789999999999976 88999999999999
Q ss_pred cccceeecccccCcCCCCcccccccccccccCCcccc
Q 004689 294 PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLH 330 (736)
Q Consensus 294 ~~L~~L~l~~N~l~g~~P~~~~~~~~~l~~~~n~~~c 330 (736)
++|+.|+|++|+| +.+|..+...+..+.+++|+...
T Consensus 806 ~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 806 PSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp SSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred CCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 9999999999999 69999998888889999997653
No 301
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.29 E-value=9.8e-13 Score=151.94 Aligned_cols=107 Identities=21% Similarity=0.240 Sum_probs=64.5
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++.++.+..+++|++|+|++|.|+ .+|..++.+++|+.|+|+
T Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~ 332 (597)
T 3oja_B 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLD 332 (597)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECC
T ss_pred CCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECC
Confidence 4566666666666655566666666666666666666654444555666666666666666 455556666666666666
Q ss_pred cccCcCCCCcccccccccccccCCccccc
Q 004689 303 NNMLSGTVPSSLLSKNVVLNYAGNINLHE 331 (736)
Q Consensus 303 ~N~l~g~~P~~~~~~~~~l~~~~n~~~c~ 331 (736)
+|.|+ .+|...+..+..+.+.+|+..|.
T Consensus 333 ~N~l~-~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 333 HNSIV-TLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp SSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCCC-CcChhhcCCCCEEEeeCCCCCCh
Confidence 66665 34444445555666666666654
No 302
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.28 E-value=1.4e-12 Score=135.12 Aligned_cols=111 Identities=16% Similarity=0.195 Sum_probs=88.8
Q ss_pred CCCceEEEEccCCCCCc-cCCcccccccccccccccccccCCCCC-CCCCCCCCc----EEEcCCCCCCCCCCccccCcc
Q 004689 221 PQPSITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLR----IIHLEDNQLTGPLPSSLMNLP 294 (736)
Q Consensus 221 ~~~~l~~L~L~~n~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~----~L~Ls~N~l~g~~p~~~~~l~ 294 (736)
.+++|+.|+|++|.+++ .+|..+.++++|++|+|++|++++..+ .+..+++|+ .|+|++|.+++..+..+ ...
T Consensus 122 ~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~ 200 (276)
T 2z62_A 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEI 200 (276)
T ss_dssp TCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSC
T ss_pred cCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCcccc-CCC
Confidence 45789999999999986 368899999999999999999998776 566666665 89999999995544444 455
Q ss_pred ccceeecccccCcCCCCcccc---cccccccccCCcccccCC
Q 004689 295 NLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 295 ~L~~L~l~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~~ 333 (736)
+|+.|+|++|.++ .+|...+ ..+..+.+.+|+..|..+
T Consensus 201 ~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 201 RLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CEEEEECCSSCCS-CCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccEEECCCCcee-ecCHhHhcccccccEEEccCCcccccCC
Confidence 8999999999999 5666553 345788999999999864
No 303
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.27 E-value=1.3e-12 Score=142.53 Aligned_cols=107 Identities=21% Similarity=0.240 Sum_probs=63.9
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
++|+.|+|++|.+++..|..+..+++|+.|+|++|++++..+.+..+++|++|+|++|+++ .+|..++.+++|+.|+|+
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~ 326 (390)
T 3o6n_A 248 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLD 326 (390)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECC
T ss_pred CCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECC
Confidence 4556666666666655555666666666666666666654444555666666666666666 455556666666666666
Q ss_pred cccCcCCCCcccccccccccccCCccccc
Q 004689 303 NNMLSGTVPSSLLSKNVVLNYAGNINLHE 331 (736)
Q Consensus 303 ~N~l~g~~P~~~~~~~~~l~~~~n~~~c~ 331 (736)
+|.++ .+|...+..+..+.+.+|+..|.
T Consensus 327 ~N~i~-~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 327 HNSIV-TLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp SSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCccc-eeCchhhccCCEEEcCCCCccch
Confidence 66665 44544445555666666666653
No 304
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.27 E-value=6e-12 Score=151.30 Aligned_cols=108 Identities=29% Similarity=0.274 Sum_probs=89.2
Q ss_pred CCceEEEEccCCCCC-----ccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccc
Q 004689 222 QPSITVIHLSSKNLT-----GNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPN 295 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~-----g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 295 (736)
.++|+.|+|++|.++ +..|..|..|++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 356777777777776 3445568889999999999999999988 589999999999999999977766665 89
Q ss_pred cceeecccccCcCCCCcccccccccccccCCcccccC
Q 004689 296 LRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 296 L~~L~l~~N~l~g~~P~~~~~~~~~l~~~~n~~~c~~ 332 (736)
|+.|+|++|+|+|..|..+ ..+..+.+.+|++.|.+
T Consensus 528 L~~L~Ls~N~l~~~~~~~~-~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVF-VSLSVLDITHNKFICEC 563 (844)
T ss_dssp CCEEEEEEECCCCCCSCCC-SSCCEEEEEEECCCCSS
T ss_pred ccEEECCCCcCCCCChhHh-CCcCEEEecCCCccccc
Confidence 9999999999998777654 56778889999988843
No 305
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.27 E-value=8e-12 Score=129.43 Aligned_cols=138 Identities=15% Similarity=0.145 Sum_probs=114.5
Q ss_pred ceeEEEeeccCCCCCCC-ccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 148 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 148 ~l~~l~l~~~~~s~lpP-~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
.+..|.++.|.++.+++ .+..+..++.|.++.+.+.. ..+- ....+++|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L~ 79 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-------------------IEDG----------AYQSLSHLS 79 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCE-------------------ECTT----------TTTTCTTCC
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCc-------------------cCHH----------HccCCcCCC
Confidence 57889999999999998 58888888888888876641 0000 012356899
Q ss_pred EEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCC-CCCccccCccccceeecccc
Q 004689 227 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N 304 (736)
.|+|++|.+++..|..|.++++|++|+|++|++++..+ .+.++++|++|+|++|.+++ .+|..++++++|+.|+|++|
T Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCC
Confidence 99999999998888889999999999999999999887 68999999999999999986 47999999999999999999
Q ss_pred cCcCCCCccc
Q 004689 305 MLSGTVPSSL 314 (736)
Q Consensus 305 ~l~g~~P~~~ 314 (736)
++++..+..+
T Consensus 160 ~l~~~~~~~~ 169 (276)
T 2z62_A 160 KIQSIYCTDL 169 (276)
T ss_dssp CCCEECGGGG
T ss_pred CCCcCCHHHh
Confidence 9995444444
No 306
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.26 E-value=3.7e-12 Score=145.92 Aligned_cols=113 Identities=20% Similarity=0.200 Sum_probs=100.0
Q ss_pred CCCceEEEEccCCCCCccCCcccccccccccccccccccC-CCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccce
Q 004689 221 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT-GPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 298 (736)
Q Consensus 221 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~-~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 298 (736)
.+++|+.|+|++|.+++..|..+..+++|+.|+|++|.++ +.+| .+.++++|++|+|++|++++..|..+.++++|+.
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 4578999999999999999999999999999999999998 5677 7899999999999999999888999999999999
Q ss_pred eecccccCcCCCCccc--ccccccccccCCcccccCC
Q 004689 299 LYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 299 L~l~~N~l~g~~P~~~--~~~~~~l~~~~n~~~c~~~ 333 (736)
|+|++|++++..|..+ +..+..+.+.+|+..|..+
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 9999999996655544 3455788999999998764
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.26 E-value=4.1e-12 Score=133.64 Aligned_cols=157 Identities=17% Similarity=0.171 Sum_probs=129.1
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.++.+..|.++.|.++.+|+.+..+..++.|.++.+.+.. ...+ .. ...+++
T Consensus 76 ~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~-----------~~~~------~~-----------~~~l~~ 127 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQ-----------MSEF------SV-----------FLSLRN 127 (306)
T ss_dssp SCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEES-----------STTT------TT-----------TTTCTT
T ss_pred cccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccc-----------cccc------hh-----------hhhccC
Confidence 3568889999999999999888888889999888876651 0000 00 123578
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCC-CCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTG-PIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
|+.|+|++|.+++..|..+..+++|++|+|++|.+++ .+| .+.++++|++|+|++|+|++..|..+..+++|+.|+|+
T Consensus 128 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 207 (306)
T 2z66_A 128 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207 (306)
T ss_dssp CCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECC
Confidence 9999999999999899999999999999999999998 456 68999999999999999998889999999999999999
Q ss_pred cccCcCCCCccc--ccccccccccCCccc
Q 004689 303 NNMLSGTVPSSL--LSKNVVLNYAGNINL 329 (736)
Q Consensus 303 ~N~l~g~~P~~~--~~~~~~l~~~~n~~~ 329 (736)
+|.+++..+..+ +..+..+.+.+|...
T Consensus 208 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 208 HNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp TSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred CCccCccChhhccCcccCCEeECCCCCCc
Confidence 999995444444 245577888888544
No 308
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.26 E-value=1.1e-11 Score=121.33 Aligned_cols=90 Identities=23% Similarity=0.330 Sum_probs=82.1
Q ss_pred CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceee
Q 004689 222 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 300 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 300 (736)
+++|+.|+|++|.|++..+..|.+|++|++|+|++|+|++.+| .|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLA 132 (193)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEE
Confidence 4689999999999998777889999999999999999999988 699999999999999999976666899999999999
Q ss_pred cccccCcCCCC
Q 004689 301 VQNNMLSGTVP 311 (736)
Q Consensus 301 l~~N~l~g~~P 311 (736)
|++|.+...-.
T Consensus 133 L~~N~~~C~c~ 143 (193)
T 2wfh_A 133 IGANPLYCDCN 143 (193)
T ss_dssp CCSSCEECSGG
T ss_pred eCCCCeecCCc
Confidence 99999975444
No 309
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.25 E-value=1.6e-11 Score=118.20 Aligned_cols=130 Identities=18% Similarity=0.204 Sum_probs=101.3
Q ss_pred EEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceEEEEc
Q 004689 151 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 230 (736)
Q Consensus 151 ~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~~L~L 230 (736)
.+.+..+.+..+|..+. ..++.|.++.+.+.. ..+- ....+++|+.|+|
T Consensus 11 ~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L~~L~l 59 (177)
T 2o6r_A 11 EIRCNSKGLTSVPTGIP--SSATRLELESNKLQS-------------------LPHG----------VFDKLTQLTKLSL 59 (177)
T ss_dssp EEECCSSCCSSCCTTCC--TTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCSEEEC
T ss_pred EEEecCCCCccCCCCCC--CCCcEEEeCCCcccE-------------------eCHH----------HhcCcccccEEEC
Confidence 46667777777775433 455566666655431 1110 0123568999999
Q ss_pred cCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCC
Q 004689 231 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 309 (736)
Q Consensus 231 ~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 309 (736)
++|+|++..+..+..+++|++|+|++|+|++.++. +.++++|++|+|++|+|++..+..+..+++|+.|+|++|.+++.
T Consensus 60 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 60 SQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 99999966666689999999999999999998884 78999999999999999976666678999999999999999987
Q ss_pred CC
Q 004689 310 VP 311 (736)
Q Consensus 310 ~P 311 (736)
.|
T Consensus 140 ~~ 141 (177)
T 2o6r_A 140 CP 141 (177)
T ss_dssp HH
T ss_pred Cc
Confidence 76
No 310
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.25 E-value=8.1e-12 Score=144.22 Aligned_cols=157 Identities=18% Similarity=0.200 Sum_probs=127.7
Q ss_pred cccccccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecC
Q 004689 141 YTNLSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS 219 (736)
Q Consensus 141 ~~~~~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~ 219 (736)
...+.++.+..+.+..+.+..+|+. +..+..++.|.++.+.+.. ..|- ..
T Consensus 45 ~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~ 95 (597)
T 3oja_B 45 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-------------------IDTY----------AF 95 (597)
T ss_dssp CSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCE-------------------ECTT----------TT
T ss_pred cccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCC-------------------CChH----------Hh
Confidence 3456677888999999999999987 5777888888888776642 1110 01
Q ss_pred CCCCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccce
Q 004689 220 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 298 (736)
Q Consensus 220 ~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 298 (736)
..+++|+.|+|++|.|++..|..|++|++|++|+|++|.|++.++. |+++++|++|+|++|.|++..|..|+++++|+.
T Consensus 96 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 175 (597)
T 3oja_B 96 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN 175 (597)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcE
Confidence 2457899999999999987777889999999999999999988775 689999999999999999988889999999999
Q ss_pred eecccccCcCCCCcccccccccccccCCc
Q 004689 299 LYVQNNMLSGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 299 L~l~~N~l~g~~P~~~~~~~~~l~~~~n~ 327 (736)
|+|++|.+++ +|...+..+..+.+.+|.
T Consensus 176 L~L~~N~l~~-~~~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 176 LQLSSNRLTH-VDLSLIPSLFHANVSYNL 203 (597)
T ss_dssp EECTTSCCSB-CCGGGCTTCSEEECCSSC
T ss_pred EECcCCCCCC-cChhhhhhhhhhhcccCc
Confidence 9999999994 566666666666666663
No 311
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.25 E-value=7.4e-12 Score=144.67 Aligned_cols=177 Identities=18% Similarity=0.115 Sum_probs=131.2
Q ss_pred cccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHH----HHHHHHHcC--CCCcCCCCCCCCCCCCCceEEe
Q 004689 145 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVA----IVSVISLYS--SADWAQEGGDPCLPVPWSWLQC 217 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~a----l~~l~~~~~--~~~w~~~~~dpc~~~~~~~v~c 217 (736)
.++.+..|.++.|.++.++|. +..+..++.|.++.+.+.... +..+.++.. +..-......|.
T Consensus 374 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~---------- 443 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQ---------- 443 (606)
T ss_dssp TCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTT----------
T ss_pred cCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHH----------
Confidence 456788899999998888664 777888888888887664211 111111111 111100000110
Q ss_pred cCCCCCceEEEEccCCCCCcc---CCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCc
Q 004689 218 NSDPQPSITVIHLSSKNLTGN---IPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNL 293 (736)
Q Consensus 218 ~~~~~~~l~~L~L~~n~l~g~---~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 293 (736)
....+++|+.|+|++|.+++. .+..+..+++|+.|+|++|++++.+| .|.++++|++|+|++|+|++.+|..+.++
T Consensus 444 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 523 (606)
T 3t6q_A 444 LFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL 523 (606)
T ss_dssp TTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTC
T ss_pred HHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcc
Confidence 012357899999999999873 33578899999999999999999887 68999999999999999999999999999
Q ss_pred cccceeecccccCcCCCCccc--ccccccccccCCcccccC
Q 004689 294 PNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 294 ~~L~~L~l~~N~l~g~~P~~~--~~~~~~l~~~~n~~~c~~ 332 (736)
++| .|+|++|++++..|..+ +..+..+.+.+|+..|.+
T Consensus 524 ~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 524 KGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred ccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 999 99999999997666654 345678999999999976
No 312
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.25 E-value=1.2e-11 Score=119.03 Aligned_cols=89 Identities=24% Similarity=0.323 Sum_probs=81.0
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
++|+.|+|++|+|++..|..|.+|++|++|+|++|+|++.++. |.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 5799999999999988888999999999999999999998875 789999999999999999766667999999999999
Q ss_pred ccccCcCCCCc
Q 004689 302 QNNMLSGTVPS 312 (736)
Q Consensus 302 ~~N~l~g~~P~ 312 (736)
++|.+. ..|.
T Consensus 113 ~~N~~~-c~~~ 122 (174)
T 2r9u_A 113 YNNPWD-CECR 122 (174)
T ss_dssp CSSCBC-TTBG
T ss_pred CCCCcc-cccc
Confidence 999998 4444
No 313
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.24 E-value=1.2e-11 Score=133.51 Aligned_cols=147 Identities=19% Similarity=0.239 Sum_probs=118.3
Q ss_pred EEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceEEEEc
Q 004689 151 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 230 (736)
Q Consensus 151 ~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~~L~L 230 (736)
.+.++.+.++.+|..+.. .++.|.++.|.+.. ....+ + ...+++|+.|+|
T Consensus 22 ~l~c~~~~l~~iP~~~~~--~l~~L~Ls~N~l~~----------l~~~~------------~------~~~l~~L~~L~L 71 (361)
T 2xot_A 22 ILSCSKQQLPNVPQSLPS--YTALLDLSHNNLSR----------LRAEW------------T------PTRLTNLHSLLL 71 (361)
T ss_dssp EEECCSSCCSSCCSSCCT--TCSEEECCSSCCCE----------ECTTS------------S------SSCCTTCCEEEC
T ss_pred EEEeCCCCcCccCccCCC--CCCEEECCCCCCCc----------cChhh------------h------hhcccccCEEEC
Confidence 578888899999876543 35667777776642 00001 0 014579999999
Q ss_pred cCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccCcCC
Q 004689 231 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 309 (736)
Q Consensus 231 ~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 309 (736)
++|+|++..|..|.+|++|++|+|++|+|++.++ .|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|+ .
T Consensus 72 ~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~ 150 (361)
T 2xot_A 72 SHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-R 150 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-S
T ss_pred CCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-e
Confidence 9999998777889999999999999999999888 5899999999999999999888999999999999999999999 6
Q ss_pred CCcccc------cccccccccCCcc
Q 004689 310 VPSSLL------SKNVVLNYAGNIN 328 (736)
Q Consensus 310 ~P~~~~------~~~~~l~~~~n~~ 328 (736)
+|..++ ..+..+.+.+|..
T Consensus 151 l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 151 FPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CCGGGTC----CTTCCEEECCSSCC
T ss_pred eCHHHhcCcccCCcCCEEECCCCCC
Confidence 887764 3456777888743
No 314
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=2.5e-11 Score=124.65 Aligned_cols=138 Identities=18% Similarity=0.107 Sum_probs=108.8
Q ss_pred hhccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcC-CCceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 412 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 412 ~~~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
+...++.|+++.||++... ++.+++|+...........+.+|+++++.+. |..+.++++++...+..++||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 4567788888999999865 7899999986532233457899999999994 6778899999999899999999999999
Q ss_pred HHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 004689 491 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------ 528 (736)
Q Consensus 491 L~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~------------------------------------------ 528 (736)
|.+.+.. ......++.+++++|..||+..
T Consensus 97 l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 97 CSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp HHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred hhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 8875311 1112367889999999999810
Q ss_pred --------------CCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 529 --------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 529 --------------~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
...++|+|++|.|||++.+..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1369999999999999876566799998764
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.24 E-value=3.1e-12 Score=135.24 Aligned_cols=101 Identities=25% Similarity=0.250 Sum_probs=57.1
Q ss_pred CCceEEEEccCCCCCc--cCCcc-cccccccccccccccccCCCCC--CCCCCCCCcEEEcCCCCCCCCCCccccCcccc
Q 004689 222 QPSITVIHLSSKNLTG--NIPSD-LTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL 296 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g--~~p~~-~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 296 (736)
+++|+.|+|++|+|++ .++.. +.++++|++|+|++|++++.+| .+..+++|++|+|++|+|+ .+|..+. ++|
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L 276 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKL 276 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEE
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCc
Confidence 3466666666666662 22222 2355666666666666666553 3455666666666666666 5666555 566
Q ss_pred ceeecccccCcCCCCccc--ccccccccccCCc
Q 004689 297 RELYVQNNMLSGTVPSSL--LSKNVVLNYAGNI 327 (736)
Q Consensus 297 ~~L~l~~N~l~g~~P~~~--~~~~~~l~~~~n~ 327 (736)
+.|+|++|+|++. |. + +..+..+.+.+|+
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~ 307 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNP 307 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCT
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCC
Confidence 6666666666633 44 2 2233455555554
No 316
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.24 E-value=1.1e-11 Score=138.03 Aligned_cols=140 Identities=19% Similarity=0.136 Sum_probs=117.6
Q ss_pred ccccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCC
Q 004689 144 LSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 222 (736)
Q Consensus 144 ~~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~ 222 (736)
+..+.+..+.++.|.++.++|. +..+..++.|.++.+.+.. ..|. ....+
T Consensus 272 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-------------------~~~~----------~~~~l 322 (455)
T 3v47_A 272 LEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINK-------------------IDDN----------AFWGL 322 (455)
T ss_dssp GTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCE-------------------ECTT----------TTTTC
T ss_pred ccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccc-------------------cChh----------HhcCc
Confidence 3446788899999998887665 7778888888888776642 1111 01235
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
++|+.|+|++|.+++..|..+.++++|++|+|++|++++.+| .+.++++|++|+|++|+|++..+..+..+++|+.|+|
T Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 402 (455)
T 3v47_A 323 THLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWL 402 (455)
T ss_dssp TTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEc
Confidence 789999999999998888899999999999999999999988 7999999999999999999777778899999999999
Q ss_pred ccccCcCCCCc
Q 004689 302 QNNMLSGTVPS 312 (736)
Q Consensus 302 ~~N~l~g~~P~ 312 (736)
++|++++..|.
T Consensus 403 ~~N~l~~~~~~ 413 (455)
T 3v47_A 403 HTNPWDCSCPR 413 (455)
T ss_dssp CSSCBCCCTTT
T ss_pred cCCCcccCCCc
Confidence 99999999984
No 317
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.24 E-value=8.8e-12 Score=144.33 Aligned_cols=138 Identities=15% Similarity=0.150 Sum_probs=117.4
Q ss_pred ceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 148 FVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 148 ~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
+++.|+|+.|.++.+||- +..+..|+.|.++.|.+.. -+|- ....+++|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~-------------------i~~~----------~f~~L~~L~ 103 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-------------------IEDG----------AYQSLSHLS 103 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE-------------------ECTT----------TTTTCTTCC
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCC-------------------cChh----------HhcCCCCCC
Confidence 578899999999999985 8999999999999887652 1110 013467999
Q ss_pred EEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCC-CCCccccCccccceeecccc
Q 004689 227 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N 304 (736)
+|+|++|+|++..+..|.+|++|++|+|++|+|++.++ .|++|++|++|+|++|.|++ .+|..++.+++|+.|+|++|
T Consensus 104 ~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 183 (635)
T 4g8a_A 104 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 183 (635)
T ss_dssp EEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred EEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCc
Confidence 99999999996666678999999999999999999888 69999999999999999986 47889999999999999999
Q ss_pred cCcCCCCccc
Q 004689 305 MLSGTVPSSL 314 (736)
Q Consensus 305 ~l~g~~P~~~ 314 (736)
+|++..|..+
T Consensus 184 ~l~~~~~~~l 193 (635)
T 4g8a_A 184 KIQSIYCTDL 193 (635)
T ss_dssp CCCEECGGGG
T ss_pred cccccccccc
Confidence 9997666655
No 318
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.23 E-value=1.1e-11 Score=118.31 Aligned_cols=105 Identities=22% Similarity=0.257 Sum_probs=89.5
Q ss_pred CCceEEEEccCCCCC-ccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceee
Q 004689 222 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 300 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 300 (736)
+++|+.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. +.+.++++|++|+|++|++++.+|..+.++++|+.|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 468999999999998 88999999999999999999999988 8889999999999999999988888888899999999
Q ss_pred cccccCcCCCC--ccc--ccccccccccCCcc
Q 004689 301 VQNNMLSGTVP--SSL--LSKNVVLNYAGNIN 328 (736)
Q Consensus 301 l~~N~l~g~~P--~~~--~~~~~~l~~~~n~~ 328 (736)
|++|.+++ +| ..+ +..+..+.+.+|..
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGG
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcC
Confidence 99999984 44 344 23456777788743
No 319
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=7e-12 Score=134.43 Aligned_cols=103 Identities=19% Similarity=0.221 Sum_probs=84.0
Q ss_pred EEEccCC-CCCccCCcccccccccccccccc-cccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 227 VIHLSSK-NLTGNIPSDLTKLSSLVELWLDG-NSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 227 ~L~L~~n-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
.++++++ +|+ .+|. |..+++|+.|+|++ |+|++.++ .|.+|++|++|+|++|+|++..|..|++|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3466676 788 5888 88889999999986 89988887 688899999999999999988888889999999999999
Q ss_pred ccCcCCCCcccccc--cccccccCCcccccC
Q 004689 304 NMLSGTVPSSLLSK--NVVLNYAGNINLHEG 332 (736)
Q Consensus 304 N~l~g~~P~~~~~~--~~~l~~~~n~~~c~~ 332 (736)
|+|+ .+|..++.. +..+.+.+|+..|.+
T Consensus 90 N~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred Cccc-eeCHHHcccCCceEEEeeCCCccCCC
Confidence 9998 566665443 567788888888865
No 320
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.23 E-value=5.8e-12 Score=117.62 Aligned_cols=105 Identities=18% Similarity=0.188 Sum_probs=86.6
Q ss_pred CceEEEEccCCCCC-ccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
++|+.|+|++|+++ |.+|..+..+++|+.|+|++|++++. +.++++++|++|+|++|.+++.+|..++.+++|+.|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 57899999999998 88998889999999999999999987 77888999999999999999878888888999999999
Q ss_pred ccccCcCC-CCcccc--cccccccccCCcc
Q 004689 302 QNNMLSGT-VPSSLL--SKNVVLNYAGNIN 328 (736)
Q Consensus 302 ~~N~l~g~-~P~~~~--~~~~~l~~~~n~~ 328 (736)
++|.+++. .|..+. ..+..+.+.+|..
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 99999852 224442 3456777777743
No 321
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.22 E-value=2.4e-11 Score=139.82 Aligned_cols=147 Identities=24% Similarity=0.329 Sum_probs=112.9
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.|..|.|+.|.++.++| +..+..|+.|.++.+.+.. -|. ...+++|
T Consensus 64 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~--------------------l~~-----------l~~l~~L 111 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKD--------------------LSS-----------LKDLKKL 111 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCC--------------------CTT-----------STTCTTC
T ss_pred CCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCC--------------------Chh-----------hccCCCC
Confidence 5688889999999999988 7788888888888877642 011 1235688
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|.|++ + +.+..|++|+.|+|++|.|++. +.+.+|++|+.|+|++|+|++..| +..|++|+.|+|++|+
T Consensus 112 ~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 112 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 899999999885 3 4588889999999999998876 678888999999999999987666 8888999999999998
Q ss_pred CcCCCCc-ccccccccccccCCcccc
Q 004689 306 LSGTVPS-SLLSKNVVLNYAGNINLH 330 (736)
Q Consensus 306 l~g~~P~-~~~~~~~~l~~~~n~~~c 330 (736)
|++ +|. .-+..+..+.+.+|+...
T Consensus 187 i~~-l~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 187 ISD-LRALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCB-CGGGTTCTTCSEEECCSEEEEC
T ss_pred CCC-ChHHccCCCCCEEEccCCcCcC
Confidence 885 442 113455677777775543
No 322
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.22 E-value=1.7e-11 Score=133.58 Aligned_cols=157 Identities=18% Similarity=0.202 Sum_probs=128.5
Q ss_pred cccccccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecC
Q 004689 141 YTNLSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS 219 (736)
Q Consensus 141 ~~~~~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~ 219 (736)
...+.++.+..+.+..+.+..+|+. +..+..++.|.++.+.+.. ..+- ..
T Consensus 39 ~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~-------------------~~~~----------~~ 89 (390)
T 3o6n_A 39 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-------------------IDTY----------AF 89 (390)
T ss_dssp CSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCE-------------------ECTT----------TT
T ss_pred ccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccc-------------------cChh----------hc
Confidence 3456677889999999999999987 5778888888888776641 1110 01
Q ss_pred CCCCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCCCCccccCccccce
Q 004689 220 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 298 (736)
Q Consensus 220 ~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 298 (736)
..+++|+.|+|++|++++..|..|.++++|++|+|++|++++.++. |.++++|++|+|++|.+++..|..++++++|+.
T Consensus 90 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 169 (390)
T 3o6n_A 90 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN 169 (390)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCE
T ss_pred cCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCE
Confidence 2457899999999999987788899999999999999999977775 689999999999999999888889999999999
Q ss_pred eecccccCcCCCCcccccccccccccCCc
Q 004689 299 LYVQNNMLSGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 299 L~l~~N~l~g~~P~~~~~~~~~l~~~~n~ 327 (736)
|++++|.++ .++...+..+..+.+.+|.
T Consensus 170 L~l~~n~l~-~~~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 170 LQLSSNRLT-HVDLSLIPSLFHANVSYNL 197 (390)
T ss_dssp EECCSSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred EECCCCcCC-ccccccccccceeeccccc
Confidence 999999999 4566666666677777663
No 323
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.22 E-value=3.1e-11 Score=128.43 Aligned_cols=174 Identities=17% Similarity=0.201 Sum_probs=125.1
Q ss_pred cceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchH--HHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 147 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG--VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~--~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
+.+..|.++.|.++.+++. +..+..++.|.++.+.+.. .....+...-.+...... -|. ...+. ..-.+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~---~n~---l~~l~--~~~~~ 192 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA---DTN---ITTIP--QGLPP 192 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC---SSC---CCSCC--SSCCT
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECC---CCc---cccCC--ccccc
Confidence 4678888899988888875 6777778888887776531 001111111111111100 000 00000 01126
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.|+|++|++++..|..+..+++|+.|+|++|++++.++ .+.++++|++|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 193 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 193 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLH 271 (330)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECC
T ss_pred cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECC
Confidence 89999999999998888999999999999999999999888 6899999999999999999 899999999999999999
Q ss_pred cccCcCCCCccccc---------ccccccccCCcccc
Q 004689 303 NNMLSGTVPSSLLS---------KNVVLNYAGNINLH 330 (736)
Q Consensus 303 ~N~l~g~~P~~~~~---------~~~~l~~~~n~~~c 330 (736)
+|+++ .+|...+. ....+.+.+|+..+
T Consensus 272 ~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 272 NNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp SSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 99999 55554432 23456788887654
No 324
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.21 E-value=1.3e-11 Score=129.09 Aligned_cols=146 Identities=24% Similarity=0.359 Sum_probs=111.9
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.++| +..+..++.|.++.|.+... | ....+++|
T Consensus 67 l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~--------------------~-----------~l~~l~~L 114 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDL--------------------S-----------SLKDLKKL 114 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCG--------------------G-----------GGTTCTTC
T ss_pred CCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCC--------------------h-----------hhccCCCC
Confidence 4678889999999999988 88888888888888776420 0 01234688
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|++++ + +.+..+++|+.|+|++|++++. +.+.++++|++|+|++|+|++..| +..+++|+.|+|++|.
T Consensus 115 ~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 115 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred CEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 899999999885 3 5688889999999999998876 678888999999999999886544 8888999999999998
Q ss_pred CcCCCCccc--ccccccccccCCcccc
Q 004689 306 LSGTVPSSL--LSKNVVLNYAGNINLH 330 (736)
Q Consensus 306 l~g~~P~~~--~~~~~~l~~~~n~~~c 330 (736)
+++ +|. + +..+..+.+.+|+..+
T Consensus 190 i~~-l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISD-LRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCB-CGG-GTTCTTCSEEEEEEEEEEC
T ss_pred CCC-Chh-hccCCCCCEEECcCCcccC
Confidence 884 553 3 2344667777775544
No 325
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.21 E-value=2.3e-12 Score=147.33 Aligned_cols=181 Identities=20% Similarity=0.179 Sum_probs=109.6
Q ss_pred ccccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCc----------------hHHHHHHHHHHcCCCCcCCCC-CCC
Q 004689 144 LSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSI----------------DGVAIVSVISLYSSADWAQEG-GDP 206 (736)
Q Consensus 144 ~~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~----------------~~~al~~l~~~~~~~~w~~~~-~dp 206 (736)
...+.+..|.|+.|.++.+|+.|..+..|+.|.++++.. ....+..+.++..+..-.... .+-
T Consensus 346 ~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L 425 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDL 425 (567)
T ss_dssp STTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred ccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchh
Confidence 345677788999999999999999999998888765431 112222222221111000000 000
Q ss_pred CCCCCCceEEecCCCCCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCC
Q 004689 207 CLPVPWSWLQCNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPL 286 (736)
Q Consensus 207 c~~~~~~~v~c~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~ 286 (736)
.. .....-....-....|+.|+|++|+|++ +|. |+.|++|+.|+|++|+|+..++.+++|++|++|+|++|+|++ +
T Consensus 426 ~~-l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-l 501 (567)
T 1dce_A 426 RS-KFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-V 501 (567)
T ss_dssp HH-HHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred hh-hhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-C
Confidence 00 0000000000001247778888888874 665 778888888888888888433367778888888888888885 5
Q ss_pred CccccCccccceeecccccCcCCC-Ccccc--cccccccccCCccc
Q 004689 287 PSSLMNLPNLRELYVQNNMLSGTV-PSSLL--SKNVVLNYAGNINL 329 (736)
Q Consensus 287 p~~~~~l~~L~~L~l~~N~l~g~~-P~~~~--~~~~~l~~~~n~~~ 329 (736)
| .+++|++|+.|+|++|+|++.. |..+. ..+..+.+.+|+..
T Consensus 502 p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 502 D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 6 7778888888888888887655 66663 34566777777543
No 326
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.21 E-value=9.1e-12 Score=143.91 Aligned_cols=175 Identities=15% Similarity=0.042 Sum_probs=131.0
Q ss_pred cccceeEEEeeccCCCCC---CCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcC-----CCCCCCCCCCCCceEE
Q 004689 145 SLPFVLSFKFGKTYDSSR---GPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWA-----QEGGDPCLPVPWSWLQ 216 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~l---pP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~-----~~~~dpc~~~~~~~v~ 216 (736)
.++.+..|.++.|.++.+ |..+..+..++.|.++.+.+.... ..+...-.+.... ..+..|.
T Consensus 348 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~--------- 417 (606)
T 3vq2_A 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEF--------- 417 (606)
T ss_dssp CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTT---------
T ss_pred cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccCh---------
Confidence 567889999999999888 455777778888888887653210 0011111111100 0000000
Q ss_pred ecCCCCCceEEEEccCCCCCccCCcccccccccccccccccccCC-CCC-CCCCCCCCcEEEcCCCCCCCCCCccccCcc
Q 004689 217 CNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTG-PIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLP 294 (736)
Q Consensus 217 c~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 294 (736)
.....+++|+.|+|++|.+++..|..+..+++|++|+|++|++++ .+| .+.++++|++|+|++|++++.+|..+++++
T Consensus 418 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 497 (606)
T 3vq2_A 418 SAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLH 497 (606)
T ss_dssp TTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccc
Confidence 012346799999999999999999999999999999999999998 456 689999999999999999999999999999
Q ss_pred ccceeecccccCcCCCCcccc--cccccccccCCccc
Q 004689 295 NLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNINL 329 (736)
Q Consensus 295 ~L~~L~l~~N~l~g~~P~~~~--~~~~~l~~~~n~~~ 329 (736)
+|+.|+|++|++++.+|..+. ..+..+.+.+|...
T Consensus 498 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 498 RLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp TCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred cCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 999999999999987787774 34577888888543
No 327
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.21 E-value=6.5e-12 Score=132.53 Aligned_cols=170 Identities=19% Similarity=0.264 Sum_probs=110.8
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.+++ +..+..++.|.++.+.+... ..+...-.+..-... -|. ...+. ....+++|
T Consensus 62 l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~---~n~---l~~~~-~l~~l~~L 131 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLT---STQ---ITDVT-PLAGLSNL 131 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECT---TSC---CCCCG-GGTTCTTC
T ss_pred cCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECC---CCC---CCCch-hhcCCCCC
Confidence 4577888999999999888 78888888888888766421 112211112111100 010 01110 12345678
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|.+++ ++. +..+++|+.|+|++|++++..+ +.++++|+.|+|++|++++..+ +..+++|+.|+|++|+
T Consensus 132 ~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 132 QVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred CEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 888888888874 333 7788888888888888887655 7788888888888888885433 7788888888888888
Q ss_pred CcCCCCcccccccccccccCCcccc
Q 004689 306 LSGTVPSSLLSKNVVLNYAGNINLH 330 (736)
Q Consensus 306 l~g~~P~~~~~~~~~l~~~~n~~~c 330 (736)
+++..|-.-+..+..+.+.+|+..+
T Consensus 207 l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred cCccccccCCCCCCEEEccCCeeec
Confidence 8855443333445667777776544
No 328
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.20 E-value=3e-12 Score=143.51 Aligned_cols=108 Identities=25% Similarity=0.210 Sum_probs=95.7
Q ss_pred CceEEEEccCCCCCccCC-cccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceee
Q 004689 223 PSITVIHLSSKNLTGNIP-SDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 300 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 300 (736)
.+|+.|+|++|+|++ +| ..+..+++|+.|+|++|.+++..+ .|.++++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 224 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 302 (477)
T 2id5_A 224 LNLTSLSITHCNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLN 302 (477)
T ss_dssp CCCSEEEEESSCCCS-CCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEE
T ss_pred ccccEEECcCCcccc-cCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEE
Confidence 489999999999994 55 578899999999999999999887 689999999999999999999999999999999999
Q ss_pred cccccCcCCCCcccc---cccccccccCCcccccC
Q 004689 301 VQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 301 l~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~ 332 (736)
|++|+|+ .+|...+ ..+..+.+.+|+..|.+
T Consensus 303 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 303 VSGNQLT-TLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CCSSCCS-CCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCCCcCc-eeCHhHcCCCcccCEEEccCCCccCcc
Confidence 9999999 5666554 35578899999999876
No 329
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.20 E-value=2.6e-11 Score=127.95 Aligned_cols=154 Identities=20% Similarity=0.202 Sum_probs=114.7
Q ss_pred cccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHH-HHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCC
Q 004689 145 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGV-AIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 222 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~-al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~ 222 (736)
.++.+..|.++.|.++.++|. +..+..++.|.++.|.+... .+. ..-|. ..+
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~---------------~~~~~-----------~~l 196 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLM---------------AALCP-----------HKF 196 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHH---------------TTSCT-----------TSS
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhh---------------HHHhh-----------hcC
Confidence 466888999999999988864 78888899999988875321 111 01110 234
Q ss_pred CceEEEEccCCCCCccCCcc----cccccccccccccccccCCCCC-CCCCC---CCCcEEEcCCCCCCCCCCccccCcc
Q 004689 223 PSITVIHLSSKNLTGNIPSD----LTKLSSLVELWLDGNSLTGPIP-DFSGC---PDLRIIHLEDNQLTGPLPSSLMNLP 294 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~----~~~l~~L~~L~Ls~N~l~~~~p-~~~~l---~~L~~L~Ls~N~l~g~~p~~~~~l~ 294 (736)
++|+.|+|++|+++ .+|.. +.++++|++|+|++|++++..| .+..+ ++|++|+|++|+|+ .+|..+. +
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~ 272 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--A 272 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--S
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--C
Confidence 68999999999997 34432 4678999999999999999865 56665 69999999999999 7788775 7
Q ss_pred ccceeecccccCcC-CCCcccccccccccccCCccc
Q 004689 295 NLRELYVQNNMLSG-TVPSSLLSKNVVLNYAGNINL 329 (736)
Q Consensus 295 ~L~~L~l~~N~l~g-~~P~~~~~~~~~l~~~~n~~~ 329 (736)
+|+.|+|++|+|++ ..+. -+..+..+.+++|+..
T Consensus 273 ~L~~L~Ls~N~l~~~~~~~-~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 273 KLRVLDLSSNRLNRAPQPD-ELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCSCEECCSCCCCSCCCTT-SCCCCSCEECSSTTTS
T ss_pred CCCEEECCCCcCCCCchhh-hCCCccEEECcCCCCC
Confidence 99999999999996 2322 2355677888888654
No 330
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.20 E-value=2.1e-11 Score=139.28 Aligned_cols=89 Identities=26% Similarity=0.315 Sum_probs=83.2
Q ss_pred CCCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCC-CccccCcccccee
Q 004689 221 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPL-PSSLMNLPNLREL 299 (736)
Q Consensus 221 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L 299 (736)
.+++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +|.+++|++|++|+|++|+|++.+ |..+++|++|+.|
T Consensus 461 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 4578999999999999 899999999999999999999998 568999999999999999999887 9999999999999
Q ss_pred ecccccCcCCCC
Q 004689 300 YVQNNMLSGTVP 311 (736)
Q Consensus 300 ~l~~N~l~g~~P 311 (736)
+|++|+|++..|
T Consensus 539 ~L~~N~l~~~~~ 550 (567)
T 1dce_A 539 NLQGNSLCQEEG 550 (567)
T ss_dssp ECTTSGGGGSSS
T ss_pred EecCCcCCCCcc
Confidence 999999996555
No 331
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.18 E-value=2.8e-11 Score=138.68 Aligned_cols=157 Identities=18% Similarity=0.209 Sum_probs=117.6
Q ss_pred cccceeEEEeeccCCCC-CCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 145 SLPFVLSFKFGKTYDSS-RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~-lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
.++.+..|.++.|.++. +|+.+..+..++.|.++.|.+.... .+ | -....++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~---------------~----------~~~~~l~ 403 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF--KV---------------A----------LMTKNMS 403 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT--HH---------------H----------HTTTTCT
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc--cc---------------h----------hhhcCCC
Confidence 34556667777776666 3444666666666666666553100 00 0 0012357
Q ss_pred ceEEEEccCCCCCccCCcc-cccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 224 SITVIHLSSKNLTGNIPSD-LTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~-~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
+|+.|+|++|.+++.+|.. +..+++|+.|+|++|++++.+| .+. ++|++|+|++|+|+ .+|..+.++++|+.|+|
T Consensus 404 ~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L 480 (562)
T 3a79_B 404 SLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNV 480 (562)
T ss_dssp TCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEEC
T ss_pred CCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEEC
Confidence 8999999999999867774 7789999999999999998777 343 79999999999999 78988889999999999
Q ss_pred ccccCcCCCCcccc---cccccccccCCcccccC
Q 004689 302 QNNMLSGTVPSSLL---SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 302 ~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~ 332 (736)
++|+|+ .+|...+ ..+..+.+.+|++.|.+
T Consensus 481 ~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 481 ASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 999999 7888733 34567899999999875
No 332
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.18 E-value=8.5e-12 Score=116.47 Aligned_cols=82 Identities=26% Similarity=0.379 Sum_probs=39.8
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCC-CCccccCccccceeec
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGP-LPSSLMNLPNLRELYV 301 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~l 301 (736)
+|+.|+|++|++++. ..+..+++|++|+|++|.+++.+|. +.++++|++|+|++|.|++. .|..++.+++|+.|++
T Consensus 43 ~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l 120 (149)
T 2je0_A 43 ELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDL 120 (149)
T ss_dssp TCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEEC
T ss_pred CCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeC
Confidence 455555555555532 4444555555555555555554442 33355555555555555431 2244555555555555
Q ss_pred ccccCc
Q 004689 302 QNNMLS 307 (736)
Q Consensus 302 ~~N~l~ 307 (736)
++|.++
T Consensus 121 ~~N~l~ 126 (149)
T 2je0_A 121 FNCEVT 126 (149)
T ss_dssp TTCGGG
T ss_pred cCCccc
Confidence 555554
No 333
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.17 E-value=3e-12 Score=135.63 Aligned_cols=106 Identities=15% Similarity=0.129 Sum_probs=66.6
Q ss_pred CceEEEEccCCCCCccCCcccc-cccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
++|+.|+|++|.+++..|..+. .+++|++|+|++|++++. +....+++|++|+|++|+|++ +|..+..+++|+.|+|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 221 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISL 221 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEEC
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCCc-chhhhcccCcccEEEC
Confidence 4566666666666655555543 566666666666666655 333346677777777777773 4555777777777777
Q ss_pred ccccCcCCCCcccc--cccccccccCCccccc
Q 004689 302 QNNMLSGTVPSSLL--SKNVVLNYAGNINLHE 331 (736)
Q Consensus 302 ~~N~l~g~~P~~~~--~~~~~l~~~~n~~~c~ 331 (736)
++|.++ .+|..+. ..+..+.+.+|+..|.
T Consensus 222 ~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred cCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 777777 5666542 3446667777776654
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.17 E-value=9.3e-12 Score=131.35 Aligned_cols=173 Identities=17% Similarity=0.088 Sum_probs=114.9
Q ss_pred cceeEEEeeccCCCCCCCc-c--chhhhhhhhccCCCCchHH----HHHHHHHHcCCCCc----CCCCCCCCCCCCCceE
Q 004689 147 PFVLSFKFGKTYDSSRGPL-L--NAMEINKYLERNDGSIDGV----AIVSVISLYSSADW----AQEGGDPCLPVPWSWL 215 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~-i--n~~e~~~~l~~~~~~~~~~----al~~l~~~~~~~~w----~~~~~dpc~~~~~~~v 215 (736)
+.+..|.++.|.++..+|. + ..+..++.|.++.|.+... ....+...-.+..- +.-.+-+|.
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~------- 163 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCE------- 163 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTT-------
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHH-------
Confidence 4466677777776655444 3 5666667776666665420 00111111111110 000122221
Q ss_pred EecCCCCCceEEEEccCCCCCcc--C--CcccccccccccccccccccCCCCC---C-CCCCCCCcEEEcCCCCCCCCCC
Q 004689 216 QCNSDPQPSITVIHLSSKNLTGN--I--PSDLTKLSSLVELWLDGNSLTGPIP---D-FSGCPDLRIIHLEDNQLTGPLP 287 (736)
Q Consensus 216 ~c~~~~~~~l~~L~L~~n~l~g~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p---~-~~~l~~L~~L~Ls~N~l~g~~p 287 (736)
....+++|+.|+|++|++.+. + +..+..+++|++|+|++|+++...+ . +.++++|++|+|++|+|++.+|
T Consensus 164 --~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p 241 (310)
T 4glp_A 164 --QVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVN 241 (310)
T ss_dssp --SCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCC
T ss_pred --HhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccch
Confidence 112467899999999998753 2 2334788999999999999975433 2 4678999999999999998888
Q ss_pred ccccCc---cccceeecccccCcCCCCcccccccccccccCCccc
Q 004689 288 SSLMNL---PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINL 329 (736)
Q Consensus 288 ~~~~~l---~~L~~L~l~~N~l~g~~P~~~~~~~~~l~~~~n~~~ 329 (736)
..++.+ ++|+.|+|++|+|+ .+|..+...+..+.+++|...
T Consensus 242 ~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 242 PSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLN 285 (310)
T ss_dssp SCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCC
T ss_pred hhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCC
Confidence 888887 69999999999999 889988877788888888543
No 335
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.17 E-value=8.2e-12 Score=147.11 Aligned_cols=91 Identities=32% Similarity=0.375 Sum_probs=60.6
Q ss_pred CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 222 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
+++|+.|+|++|.|+ .+|..|.+|++|++|+|++|+|+..+..|++|++|++|+|++|.|+ .+|..|++|++|+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 346666777777776 6666677777777777777777633235666777777777777665 56666777777777777
Q ss_pred ccccCcCCCCccc
Q 004689 302 QNNMLSGTVPSSL 314 (736)
Q Consensus 302 ~~N~l~g~~P~~~ 314 (736)
++|.|+|.+|..+
T Consensus 324 ~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 324 EGNPLEKQFLKIL 336 (727)
T ss_dssp TTSCCCSHHHHHH
T ss_pred CCCccCCCChHHH
Confidence 7777766666555
No 336
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.16 E-value=5.5e-11 Score=134.72 Aligned_cols=156 Identities=17% Similarity=0.230 Sum_probs=120.6
Q ss_pred cccceeEEEeeccCCCC-CCCccchhhhhhhhccCCCCchHH-HHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCC
Q 004689 145 SLPFVLSFKFGKTYDSS-RGPLLNAMEINKYLERNDGSIDGV-AIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 222 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~-lpP~in~~e~~~~l~~~~~~~~~~-al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~ 222 (736)
.++.+..|.++.|.++. +|+.+..+..++.|.++.|.+... .+. .. ...+
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~---~~-------------------------~~~l 373 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIA---EM-------------------------TTQM 373 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHH---HH-------------------------HTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccch---HH-------------------------HhhC
Confidence 45566777777777777 455577777777777777666421 110 00 1234
Q ss_pred CceEEEEccCCCCCccCCcc-cccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceee
Q 004689 223 PSITVIHLSSKNLTGNIPSD-LTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 300 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~-~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 300 (736)
++|+.|+|++|.+++.+|.. +..+++|++|+|++|++++.+| .+. ++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 374 ~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~ 450 (520)
T 2z7x_B 374 KSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELN 450 (520)
T ss_dssp TTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEE
T ss_pred CCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEE
Confidence 68999999999999868875 7889999999999999998777 443 78999999999999 8999888999999999
Q ss_pred cccccCcCCCCcccc---cccccccccCCcccccC
Q 004689 301 VQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 301 l~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~ 332 (736)
|++|+|+ .+|...+ ..+..+.+.+|+..|.+
T Consensus 451 L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 451 VASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCCcCC-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 9999999 7888733 34578889999999875
No 337
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.16 E-value=7.2e-11 Score=138.38 Aligned_cols=179 Identities=16% Similarity=0.077 Sum_probs=122.1
Q ss_pred cccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchH-----HHHHHHHHHcC--CCCcCCCCCCCCCCCCCceEE
Q 004689 145 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG-----VAIVSVISLYS--SADWAQEGGDPCLPVPWSWLQ 216 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~-----~al~~l~~~~~--~~~w~~~~~dpc~~~~~~~v~ 216 (736)
.++.+..|.++.|.++.++|. +..+..++.|.+..+.... .++..+.++.. +..-....-.+.
T Consensus 428 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~--------- 498 (680)
T 1ziw_A 428 GLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD--------- 498 (680)
T ss_dssp TCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTT---------
T ss_pred CcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChh---------
Confidence 356778888888887777654 5556666677666655421 00100110000 111000000000
Q ss_pred ecCCCCCceEEEEccCCCCCccC----C----cccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCC
Q 004689 217 CNSDPQPSITVIHLSSKNLTGNI----P----SDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLP 287 (736)
Q Consensus 217 c~~~~~~~l~~L~L~~n~l~g~~----p----~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p 287 (736)
....+++|+.|+|++|.+++.. | ..+.++++|+.|+|++|+++..++ .|.++++|++|+|++|+|++..+
T Consensus 499 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 577 (680)
T 1ziw_A 499 -MLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577 (680)
T ss_dssp -TTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred -hhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCH
Confidence 0123568999999999998532 1 237889999999999999996666 58999999999999999997666
Q ss_pred ccccCccccceeecccccCcCCCCccc---ccccccccccCCcccccCC
Q 004689 288 SSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 333 (736)
Q Consensus 288 ~~~~~l~~L~~L~l~~N~l~g~~P~~~---~~~~~~l~~~~n~~~c~~~ 333 (736)
..|.++++|+.|+|++|+|++..|..+ +..+..+.+.+|++.|.+.
T Consensus 578 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred hHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 678899999999999999996555443 3566789999999999874
No 338
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.16 E-value=2.3e-11 Score=129.45 Aligned_cols=175 Identities=24% Similarity=0.220 Sum_probs=116.6
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.+|+.+. ..++.|.++.+.+.......+.....+...... ..... ...........+++|
T Consensus 99 l~~L~~L~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~-~n~l~--~~~~~~~~~~~l~~L 173 (330)
T 1xku_A 99 LVKLERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELG-TNPLK--SSGIENGAFQGMKKL 173 (330)
T ss_dssp CTTCCEEECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC-SSCCC--GGGBCTTGGGGCTTC
T ss_pred CCCCCEEECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECC-CCcCC--ccCcChhhccCCCCc
Confidence 4577788888888888877654 456667777665532222222222222211110 00000 000000011235688
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
+.|+|++|+++ .+|..+. ++|++|+|++|++++..| .+.++++|++|+|++|.+++..|..+..+++|+.|+|++|
T Consensus 174 ~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 250 (330)
T 1xku_A 174 SYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN 250 (330)
T ss_dssp CEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSS
T ss_pred CEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCC
Confidence 89999999988 5777665 789999999999998877 6888999999999999999877778999999999999999
Q ss_pred cCcCCCCccccc--ccccccccCCccc
Q 004689 305 MLSGTVPSSLLS--KNVVLNYAGNINL 329 (736)
Q Consensus 305 ~l~g~~P~~~~~--~~~~l~~~~n~~~ 329 (736)
.++ .+|..+.. .+..+.+.+|...
T Consensus 251 ~l~-~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 251 KLV-KVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp CCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred cCc-cCChhhccCCCcCEEECCCCcCC
Confidence 998 88887643 4466777777544
No 339
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.15 E-value=2.5e-11 Score=135.19 Aligned_cols=178 Identities=18% Similarity=0.144 Sum_probs=118.1
Q ss_pred cccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEe-cCCCC
Q 004689 145 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 222 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c-~~~~~ 222 (736)
.++.+..|.|+.|.++.++|. +..+..|+.|.++.|.+....-..+...-.+..-... . | ....+.. ....+
T Consensus 97 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~-~--N---~l~~~~~~~~~~l 170 (452)
T 3zyi_A 97 HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR-N--N---PIESIPSYAFNRV 170 (452)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC-S--C---CCCEECTTTTTTC
T ss_pred CCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC-C--C---CcceeCHhHHhcC
Confidence 356888999999999998865 7888888999888887642100001111111111000 0 0 0111110 12345
Q ss_pred CceEEEEccCCCCCccCCc-ccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
++|+.|+|++|+..+.+|. .|.++++|++|+|++|++++. |.+..+++|++|+|++|.|++..|..|.++++|+.|+|
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 249 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 249 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEEC
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEe
Confidence 6788888887444335554 577888888888888888864 67888888999999999998888888889999999999
Q ss_pred ccccCcCCCCcccc--cccccccccCCccc
Q 004689 302 QNNMLSGTVPSSLL--SKNVVLNYAGNINL 329 (736)
Q Consensus 302 ~~N~l~g~~P~~~~--~~~~~l~~~~n~~~ 329 (736)
++|++++..|..+. ..+..+.+.+|...
T Consensus 250 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 250 MNSQVSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCceECHHHhcCCCCCCEEECCCCcCC
Confidence 99998866665553 34567777777443
No 340
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.15 E-value=5.7e-11 Score=133.06 Aligned_cols=137 Identities=18% Similarity=0.156 Sum_probs=83.2
Q ss_pred ccceeEEEeeccCCCCCCC-ccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 146 LPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP-~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
++.+..|.|+.|.++.++| .+..+..|+.|.++.+.+.. -|.. ....+++
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--------------------~~~~---------~~~~l~~ 105 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL--------------------IPLG---------VFTGLSN 105 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCS--------------------CCTT---------SSTTCTT
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCc--------------------cCcc---------cccCCCC
Confidence 3456666666666666644 35666666666666554431 0000 0012356
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
|+.|+|++|.+++..|..|.++++|++|+|++|.+++..+ .|.++++|++|+|++|++++..+..+.++++|+.|+|++
T Consensus 106 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 185 (477)
T 2id5_A 106 LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 185 (477)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEES
T ss_pred CCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCC
Confidence 6777777777776666666677777777777777766655 566677777777777777655445566667777777777
Q ss_pred ccCcCCCC
Q 004689 304 NMLSGTVP 311 (736)
Q Consensus 304 N~l~g~~P 311 (736)
|.+++..+
T Consensus 186 n~i~~~~~ 193 (477)
T 2id5_A 186 LNINAIRD 193 (477)
T ss_dssp CCCCEECT
T ss_pred CcCcEeCh
Confidence 76664333
No 341
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.14 E-value=6.7e-11 Score=142.15 Aligned_cols=152 Identities=18% Similarity=0.144 Sum_probs=109.4
Q ss_pred cceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 147 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
+.+..|+|+.|.++.++|. +..+..|+.|.++.+..-. . -+|- ....+++|
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~----------~--------i~~~----------~f~~L~~L 75 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPL----------T--------IDKE----------AFRNLPNL 75 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCC----------E--------ECTT----------TTSSCTTC
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCcc----------c--------cCHH----------HhcCCCCC
Confidence 5678899999999988654 8888888888888763210 0 0010 01235678
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCC-C--CCCCCCCcEEEcCCCCCCCCCC-ccccCccccceeec
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-D--FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELYV 301 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~--~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~l 301 (736)
+.|+|++|++++..|..|.+|++|++|+|++|.+++.+| . +.+|++|++|+|++|.+++..| ..|++|++|+.|+|
T Consensus 76 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~L 155 (844)
T 3j0a_A 76 RILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDF 155 (844)
T ss_dssp CEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEE
T ss_pred CEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEEC
Confidence 888888888887778888888888888888888888655 3 7888888888888888887654 47888888888888
Q ss_pred ccccCcCCCCcccc----cccccccccCC
Q 004689 302 QNNMLSGTVPSSLL----SKNVVLNYAGN 326 (736)
Q Consensus 302 ~~N~l~g~~P~~~~----~~~~~l~~~~n 326 (736)
++|.+++..|..+. ..+..+.+.+|
T Consensus 156 s~N~i~~~~~~~l~~l~~~~L~~L~L~~n 184 (844)
T 3j0a_A 156 SSNQIFLVCEHELEPLQGKTLSFFSLAAN 184 (844)
T ss_dssp ESSCCCCCCSGGGHHHHHCSSCCCEECCS
T ss_pred CCCcCCeeCHHHcccccCCccceEECCCC
Confidence 88888877776653 23344444444
No 342
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.14 E-value=9.7e-12 Score=146.49 Aligned_cols=139 Identities=17% Similarity=0.165 Sum_probs=116.0
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.++.+..|.|+.|.+..+|+.+..+..|..|.++.|.+.. + |. ....+++
T Consensus 222 ~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~~-----------l---------p~----------~~~~l~~ 271 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTE-----------L---------PA----------EIKNLSN 271 (727)
T ss_dssp CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCSC-----------C---------CG----------GGGGGTT
T ss_pred cCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCcc-----------c---------Ch----------hhhCCCC
Confidence 4567888999999999999988888888888888876641 1 10 0123578
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccc-cceeeccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPN-LRELYVQN 303 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~l~~ 303 (736)
|+.|+|++|.|+ .+|..|++|++|++|+|++|.|+..++.|++|++|++|+|++|.|+|.+|..+..+.. +..|+|++
T Consensus 272 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~ 350 (727)
T 4b8c_D 272 LRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRD 350 (727)
T ss_dssp CCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhcc
Confidence 999999999999 8999999999999999999999865558999999999999999999999998877643 34589999
Q ss_pred ccCcCCCCccc
Q 004689 304 NMLSGTVPSSL 314 (736)
Q Consensus 304 N~l~g~~P~~~ 314 (736)
|.++|.+|..+
T Consensus 351 N~l~~~~p~~l 361 (727)
T 4b8c_D 351 NRPEIPLPHER 361 (727)
T ss_dssp CCCCCCCCCC-
T ss_pred CcccCcCcccc
Confidence 99999999876
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.14 E-value=2.3e-11 Score=123.19 Aligned_cols=149 Identities=18% Similarity=0.127 Sum_probs=114.2
Q ss_pred ceeEEEeeccCCCCCCC-ccchhhhhhhhccCCCC-chHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 148 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGS-IDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 148 ~l~~l~l~~~~~s~lpP-~in~~e~~~~l~~~~~~-~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
.+..|.++.|.++.+|+ .+..+..++.|.++.+. +.. -.+ ... ..+++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~-------------------i~~-----~~f-----~~l~~L 82 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQ-------------------LES-----HSF-----YNLSKV 82 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCE-------------------ECT-----TTE-----ESCTTC
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcce-------------------eCH-----hHc-----CCCcCC
Confidence 56789999999999998 57788888888888775 431 000 011 124689
Q ss_pred EEEEccC-CCCCccCCcccccccccccccccccccCCCCCCCCCCCCCc---EEEcCCC-CCCCCCCccccCccccc-ee
Q 004689 226 TVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLR---IIHLEDN-QLTGPLPSSLMNLPNLR-EL 299 (736)
Q Consensus 226 ~~L~L~~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~l~~L~-~L 299 (736)
+.|+|++ |+|++..+..|.++++|++|+|++|++++ +|.+.++++|+ +|+|++| ++++..+..|.++++|+ .|
T Consensus 83 ~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L 161 (239)
T 2xwt_C 83 THIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTL 161 (239)
T ss_dssp CEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEE
T ss_pred cEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcceeEE
Confidence 9999998 89986666678889999999999999988 55588888887 9999999 88866666788899999 99
Q ss_pred ecccccCcCCCCcccccc--cccccccCCc
Q 004689 300 YVQNNMLSGTVPSSLLSK--NVVLNYAGNI 327 (736)
Q Consensus 300 ~l~~N~l~g~~P~~~~~~--~~~l~~~~n~ 327 (736)
++++|.++ .+|...+.. +..+.+.+|.
T Consensus 162 ~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 162 KLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp ECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred EcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 99999998 788766543 4566677774
No 344
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.14 E-value=6.2e-12 Score=135.21 Aligned_cols=181 Identities=13% Similarity=0.094 Sum_probs=118.6
Q ss_pred ccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHH-HHHHHHcCCCCcCCCCCCCCCCCCCceEE-ecCCCC
Q 004689 146 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQ 222 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al-~~l~~~~~~~~w~~~~~dpc~~~~~~~v~-c~~~~~ 222 (736)
++.+..|+++.|.++.+|+. +..+..++.|.++.|.+..... ..+.....+......+.+ ....+. -....+
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~-----~~~~~~~~~~~~l 173 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD-----TFTKIQRKDFAGL 173 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS-----SCCEECTTTTTTC
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc-----cccccCHHHccCC
Confidence 34566677777777777665 5666666666666655431000 000000000000000000 000000 011235
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCCC-CCCCCCCcEEEcCCCCCCCC----------------
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGP---------------- 285 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~---------------- 285 (736)
++|+.|+|++|++++..|..+.++++|++|+|++|+++..++. +..+++|++|+|++|.+++.
T Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~ 253 (353)
T 2z80_A 174 TFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKK 253 (353)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCE
T ss_pred CCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhc
Confidence 7899999999999988888999999999999999998765543 45688999999999999864
Q ss_pred ---------------CCccccCccccceeecccccCcCCCCcccc---cccccccccCCcccccC
Q 004689 286 ---------------LPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEG 332 (736)
Q Consensus 286 ---------------~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~---~~~~~l~~~~n~~~c~~ 332 (736)
+|..+.++++|+.|+|++|+++ .+|..++ ..+..+.+.+|+..|..
T Consensus 254 l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 254 FTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp EEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 3445678899999999999999 8898764 34578899999998865
No 345
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.14 E-value=8.2e-11 Score=125.28 Aligned_cols=173 Identities=16% Similarity=0.168 Sum_probs=125.3
Q ss_pred cceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHH--HHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 147 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGV--AIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~--al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
+.+..|.++.|.++.+|+. +..+..++.|.+..+.+... ....+... .+..-... -| ....+. ..-.+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~---~n---~l~~l~--~~~~~ 193 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS---EA---KLTGIP--KDLPE 193 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCC---SS---BCSSCC--SSSCS
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECc---CC---CCCccC--ccccC
Confidence 5788899999999999885 78888888888888776420 00000000 11100000 00 000000 01125
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.|+|++|.+++..|..+..+++|+.|+|++|++++.++ .+..+++|++|+|++|+|+ .+|..+..+++|+.|+++
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECC
Confidence 89999999999998888899999999999999999999888 6899999999999999999 899999999999999999
Q ss_pred cccCcCCCCccccc---------ccccccccCCcccc
Q 004689 303 NNMLSGTVPSSLLS---------KNVVLNYAGNINLH 330 (736)
Q Consensus 303 ~N~l~g~~P~~~~~---------~~~~l~~~~n~~~c 330 (736)
+|+++ .+|...+. ....+.+.+|+..+
T Consensus 273 ~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 273 TNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp SSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCCCC-ccChhHccccccccccccccceEeecCcccc
Confidence 99999 45543322 23467788887663
No 346
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.13 E-value=5.1e-11 Score=127.68 Aligned_cols=122 Identities=22% Similarity=0.206 Sum_probs=94.0
Q ss_pred CCceEEecCC-C---------CCceEEEEccC-CCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcC
Q 004689 211 PWSWLQCNSD-P---------QPSITVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLE 278 (736)
Q Consensus 211 ~~~~v~c~~~-~---------~~~l~~L~L~~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls 278 (736)
.|..|.|+.. . +++|+.|+|++ |.|++..|..|.+|++|+.|+|++|+|++.+| .|.+|++|++|+|+
T Consensus 9 ~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred cCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 4677888765 2 35699999996 99998777889999999999999999999998 58999999999999
Q ss_pred CCCCCCCCCccccCccccceeecccccCcCCCCcccccc---cccccccCCcccccCC
Q 004689 279 DNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSK---NVVLNYAGNINLHEGG 333 (736)
Q Consensus 279 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~~~~---~~~l~~~~n~~~c~~~ 333 (736)
+|+|++..|..+..++ |+.|+|++|.|...-....+.. .....+..+...|..+
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 9999966666666665 9999999999985433222211 1223334555666554
No 347
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.13 E-value=3.6e-11 Score=118.00 Aligned_cols=131 Identities=13% Similarity=0.209 Sum_probs=103.8
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.++ .+..+..++.|.++.+.+.. ..|. ....+++|
T Consensus 65 l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~-------------------~~~~----------~l~~l~~L 114 (197)
T 4ezg_A 65 AHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTS-------------------DKIP----------NLSGLTSL 114 (197)
T ss_dssp CTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBG-------------------GGSC----------CCTTCTTC
T ss_pred CCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCc-------------------ccCh----------hhcCCCCC
Confidence 357888999999877664 56677888888888776642 0111 01235789
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|++++..|..+..+++|++|+|++|.+.+.+|.+.++++|++|+|++|.+++ ++ .+..+++|+.|++++|+
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 99999999999888999999999999999999944455689999999999999999995 55 79999999999999999
Q ss_pred CcC
Q 004689 306 LSG 308 (736)
Q Consensus 306 l~g 308 (736)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 348
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.13 E-value=3.3e-11 Score=133.71 Aligned_cols=178 Identities=18% Similarity=0.168 Sum_probs=119.2
Q ss_pred cccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEe-cCCCC
Q 004689 145 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 222 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c-~~~~~ 222 (736)
.++.+..|.|+.|.++.++|. +..+..|+.|.++.|.+....-..+...-.+..-... ++ ....+.. ....+
T Consensus 86 ~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~-~N-----~i~~~~~~~~~~l 159 (440)
T 3zyj_A 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR-NN-----PIESIPSYAFNRI 159 (440)
T ss_dssp SCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC-SC-----CCCEECTTTTTTC
T ss_pred CCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC-CC-----cccccCHHHhhhC
Confidence 356788999999999999865 7888888899988887642100001111111111000 00 0111110 12345
Q ss_pred CceEEEEccCCCCCccCCc-ccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
++|+.|+|++|+..+.++. .|.++++|++|+|++|+++. +|.+.++++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 238 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238 (440)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCccChhhhccCccCCEEEC
Confidence 7888888888544445554 67888899999999998884 467888899999999999999888888999999999999
Q ss_pred ccccCcCCCCcccc--cccccccccCCccc
Q 004689 302 QNNMLSGTVPSSLL--SKNVVLNYAGNINL 329 (736)
Q Consensus 302 ~~N~l~g~~P~~~~--~~~~~l~~~~n~~~ 329 (736)
++|++++..|..+. ..+..+.+.+|...
T Consensus 239 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 239 IQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp TTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred CCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 99999855555442 34567777777443
No 349
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.13 E-value=2.9e-11 Score=130.00 Aligned_cols=149 Identities=22% Similarity=0.120 Sum_probs=107.7
Q ss_pred ceeEEEeeccCCCCCCC-ccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 148 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 148 ~l~~l~l~~~~~s~lpP-~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
.+..|+++.|.++.+|+ .+..+..++.|.++.+.+.. ..|- ....+++|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~~L~ 103 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-------------------IEED----------SFSSLGSLE 103 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE-------------------ECTT----------TTTTCTTCC
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc-------------------cCHh----------hcCCCCCCC
Confidence 56778888888888887 57778888888887776541 0000 012346788
Q ss_pred EEEccCCCCCccCCc-ccccccccccccccccccCCCCC--CCCCCCCCcEEEcCCC-CCCCCCCccccCccccceeecc
Q 004689 227 VIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDN-QLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
.|+|++|++++ +|. .+.++++|++|+|++|++++..+ .+.++++|++|+|++| .+++..|..++++++|+.|+++
T Consensus 104 ~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 182 (353)
T 2z80_A 104 HLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182 (353)
T ss_dssp EEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred EEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECC
Confidence 88888888884 454 47888888888888888887665 4778888888888888 4665556778888888888888
Q ss_pred cccCcCCCCccccc--ccccccccCC
Q 004689 303 NNMLSGTVPSSLLS--KNVVLNYAGN 326 (736)
Q Consensus 303 ~N~l~g~~P~~~~~--~~~~l~~~~n 326 (736)
+|.+++..|..+.. .+..+.+.+|
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n 208 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMK 208 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred CCCcCccCHHHHhccccCCeecCCCC
Confidence 88888766766633 3345556655
No 350
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.12 E-value=6.9e-11 Score=134.76 Aligned_cols=177 Identities=12% Similarity=0.013 Sum_probs=118.5
Q ss_pred cceeEEEeeccCCCCCCCcc-chhhhhhhhccCCCCchHHHHHH---HHHHcCCCCcCCCCCCCCCCCCCceEE---ecC
Q 004689 147 PFVLSFKFGKTYDSSRGPLL-NAMEINKYLERNDGSIDGVAIVS---VISLYSSADWAQEGGDPCLPVPWSWLQ---CNS 219 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~i-n~~e~~~~l~~~~~~~~~~al~~---l~~~~~~~~w~~~~~dpc~~~~~~~v~---c~~ 219 (736)
..+..+.++.|.+..+|+.+ ..+..++.|.++.|.+....... +...-.+..-... -| ....+. -..
T Consensus 310 ~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls---~N---~l~~~~~~~~~~ 383 (549)
T 2z81_A 310 EKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS---QN---HLRSMQKTGEIL 383 (549)
T ss_dssp TTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECT---TS---CCCCHHHHHHHG
T ss_pred ccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEcc---CC---cccccccchhhh
Confidence 45778888888888888776 46778888888888876543322 1111111111100 01 011100 001
Q ss_pred CCCCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCC------------------CCCCCCcEEEcCCCC
Q 004689 220 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF------------------SGCPDLRIIHLEDNQ 281 (736)
Q Consensus 220 ~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~------------------~~l~~L~~L~Ls~N~ 281 (736)
..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++....+ .++++|++|+|++|+
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~ 462 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNK 462 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSC
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCc
Confidence 23567888888888888 67777777777777777777776533221 368889999999999
Q ss_pred CCCCCCccccCccccceeecccccCcCCCCccc--ccccccccccCCcccccC
Q 004689 282 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEG 332 (736)
Q Consensus 282 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~--~~~~~~l~~~~n~~~c~~ 332 (736)
|+ .+|. .+.+++|+.|+|++|+|++..|..+ +..+..+.+++|+..|..
T Consensus 463 l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 463 LK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp CS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred cC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 98 7776 5778999999999999997666655 345578899999988865
No 351
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.12 E-value=8e-11 Score=124.30 Aligned_cols=152 Identities=21% Similarity=0.172 Sum_probs=90.3
Q ss_pred ccceeEEEeeccCCCCCCCccchh-----hhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCC
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAM-----EINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSD 220 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~-----e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~ 220 (736)
++.+..|.++.|.++.+|+.+..+ ..++.|.++.|.+. +-++. ...
T Consensus 120 l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~--------------------~~~~~---------~~~ 170 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSL--------------------NFSCE---------QVR 170 (312)
T ss_dssp SCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCC--------------------CCCTT---------TCC
T ss_pred CCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCc--------------------cchHH---------Hhc
Confidence 445666777777777666556655 55666666665543 11110 001
Q ss_pred CCCceEEEEccCCCCCcc--CCccc--ccccccccccccccccCCCC--C-C-CCCCCCCcEEEcCCCCCCCCCC-cccc
Q 004689 221 PQPSITVIHLSSKNLTGN--IPSDL--TKLSSLVELWLDGNSLTGPI--P-D-FSGCPDLRIIHLEDNQLTGPLP-SSLM 291 (736)
Q Consensus 221 ~~~~l~~L~L~~n~l~g~--~p~~~--~~l~~L~~L~Ls~N~l~~~~--p-~-~~~l~~L~~L~Ls~N~l~g~~p-~~~~ 291 (736)
.+++|+.|+|++|++.|. +|..+ ..+++|++|+|++|++++.. + . +.++++|++|+|++|+|++.+| ..+.
T Consensus 171 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 245677777777776654 23333 56677777777777776422 2 2 3456677777777777776554 3455
Q ss_pred CccccceeecccccCcCCCCcccccccccccccCCc
Q 004689 292 NLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 292 ~l~~L~~L~l~~N~l~g~~P~~~~~~~~~l~~~~n~ 327 (736)
.+++|+.|+|++|.|+ .+|..+...+..+.+++|.
T Consensus 251 ~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~ 285 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNR 285 (312)
T ss_dssp CCTTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSC
T ss_pred hcCCCCEEECCCCccC-hhhhhccCCceEEECCCCC
Confidence 5667777777777776 6666666555566666664
No 352
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.12 E-value=9e-11 Score=120.76 Aligned_cols=148 Identities=20% Similarity=0.218 Sum_probs=87.7
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.+| .+..+..++.|.++.|.+.. -.+ ...+++|
T Consensus 40 l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~-------------------~~~------------l~~l~~L 87 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISD-------------------LSP------------LKDLTKL 87 (263)
T ss_dssp HTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCC-------------------CGG------------GTTCSSC
T ss_pred cCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCC-------------------Chh------------hccCCCC
Confidence 456667777777777776 45556666666666665541 000 1234567
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|++++ +|. +.. ++|+.|+|++|++++. +.+.++++|++|+|++|+|++. | .++.+++|+.|+|++|+
T Consensus 88 ~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 88 EELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp CEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSC
T ss_pred CEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCc
Confidence 777777777764 443 222 6677777777777663 4566677777777777777643 3 56667777777777777
Q ss_pred CcCCCCcccccccccccccCCccccc
Q 004689 306 LSGTVPSSLLSKNVVLNYAGNINLHE 331 (736)
Q Consensus 306 l~g~~P~~~~~~~~~l~~~~n~~~c~ 331 (736)
+++.-.-.-+..+..+.+.+|+..+.
T Consensus 162 i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 162 ITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CcchHHhccCCCCCEEeCCCCcccCC
Confidence 76441111123345556666655443
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.11 E-value=7.9e-11 Score=123.12 Aligned_cols=147 Identities=20% Similarity=0.198 Sum_probs=117.8
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.++.+..|.+..+.+..++. +..+..++.|.++.+.+.. -.+ ...+++
T Consensus 44 ~l~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~-------------------~~~------------l~~l~~ 91 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTD-------------------IKP------------LANLKN 91 (291)
T ss_dssp HHHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCC-------------------CGG------------GTTCTT
T ss_pred hcCcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCC-------------------Ccc------------cccCCC
Confidence 45678889999999998865 6777788888888776641 111 134579
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
|+.|+|++|.+++ +| .+..+++|++|+|++|++++. +.+.++++|++|+|++|++++. ..++.+++|+.|+|++|
T Consensus 92 L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N 166 (291)
T 1h6t_A 92 LGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDN 166 (291)
T ss_dssp CCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred CCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCC
Confidence 9999999999995 44 499999999999999999985 6789999999999999999965 67999999999999999
Q ss_pred cCcCCCCcccccccccccccCCcc
Q 004689 305 MLSGTVPSSLLSKNVVLNYAGNIN 328 (736)
Q Consensus 305 ~l~g~~P~~~~~~~~~l~~~~n~~ 328 (736)
.+++..|-.-+..+..+.+.+|..
T Consensus 167 ~l~~~~~l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 167 QISDIVPLAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CCCCCGGGTTCTTCCEEECCSSCC
T ss_pred ccccchhhcCCCccCEEECCCCcC
Confidence 999655533344556777888743
No 354
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.11 E-value=4.5e-11 Score=136.27 Aligned_cols=116 Identities=22% Similarity=0.193 Sum_probs=95.1
Q ss_pred CCceEEecCCC----------CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCC
Q 004689 211 PWSWLQCNSDP----------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLED 279 (736)
Q Consensus 211 ~~~~v~c~~~~----------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~ 279 (736)
+|.++ |++.. .++|+.|+|++|++++..|..|.++++|++|+|++|++++.+| .|+++++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 57777 76442 2589999999999998888899999999999999999999887 689999999999999
Q ss_pred CCCCCCCCccccCccccceeecccccCcC-CCCccc--ccccccccccCCc
Q 004689 280 NQLTGPLPSSLMNLPNLRELYVQNNMLSG-TVPSSL--LSKNVVLNYAGNI 327 (736)
Q Consensus 280 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~P~~~--~~~~~~l~~~~n~ 327 (736)
|+|++..|..|+++++|+.|+|++|.+++ .+|..+ +..+..+.+.+|.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc
Confidence 99998777789999999999999999985 345544 2344556666664
No 355
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.11 E-value=2.9e-11 Score=135.87 Aligned_cols=176 Identities=13% Similarity=-0.001 Sum_probs=115.1
Q ss_pred ccceeEEEeeccCCCCCCC-ccchhhhhhhhccCCCCchH-HHHHHHHHHcCCCCcCCC-----CCCCCCCCCCceEEec
Q 004689 146 LPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDG-VAIVSVISLYSSADWAQE-----GGDPCLPVPWSWLQCN 218 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP-~in~~e~~~~l~~~~~~~~~-~al~~l~~~~~~~~w~~~-----~~dpc~~~~~~~v~c~ 218 (736)
.+.+..|.|+.|.++.++| .+..+..++.|.++.|.+.. .. +.....+...+.+ +-.++ .....+..+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~~--~~L~~L~L~ 107 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVG--PSIETLHAA 107 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEEC--TTCCEEECC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCCC--CCcCEEECc
Confidence 3478899999999999987 58889999999999987642 11 1111112111100 00000 112223333
Q ss_pred CCCC--------CceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCC-CCCCCcEEEcCCCCCCCCCCc
Q 004689 219 SDPQ--------PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFS-GCPDLRIIHLEDNQLTGPLPS 288 (736)
Q Consensus 219 ~~~~--------~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~-~l~~L~~L~Ls~N~l~g~~p~ 288 (736)
...+ ++|+.|+|++|.|++..|..++.+++|+.|+|++|.+++.+| .+. ++++|++|+|++|.|++. |
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~- 185 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K- 185 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-
Confidence 2222 356778888888887777788888888888888888888766 554 688888888888888865 2
Q ss_pred cccCccccceeecccccCcCCCCcccc--cccccccccCCccc
Q 004689 289 SLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNINL 329 (736)
Q Consensus 289 ~~~~l~~L~~L~l~~N~l~g~~P~~~~--~~~~~l~~~~n~~~ 329 (736)
.+..+++|+.|+|++|.|++ +|..+. ..+..+++++|...
T Consensus 186 ~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 186 GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC
T ss_pred ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc
Confidence 24458888888888888885 544443 34466777777533
No 356
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.11 E-value=6.1e-11 Score=135.73 Aligned_cols=164 Identities=14% Similarity=0.139 Sum_probs=123.3
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHH-HHHHHHcCCCCcCCCCCCCCCCCCCceE-EecCCCC
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQ 222 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al-~~l~~~~~~~~w~~~~~dpc~~~~~~~v-~c~~~~~ 222 (736)
.++.+..|.++.|.++.+|+.+..+..++.|.++.+.+..... ..+...-.+..-.. .-| ..... .-....+
T Consensus 371 ~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l---~~n---~l~~~~~~~~~~l 444 (570)
T 2z63_A 371 GTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI---SHT---HTRVAFNGIFNGL 444 (570)
T ss_dssp TCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEEC---TTS---CCEECCTTTTTTC
T ss_pred ccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeC---cCC---cccccchhhhhcC
Confidence 4578889999999999998888888888888888876532100 00111111110000 000 00000 0011346
Q ss_pred CceEEEEccCCCCC-ccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceee
Q 004689 223 PSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 300 (736)
Q Consensus 223 ~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 300 (736)
++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++.+| .+.++++|++|+|++|+|++.+|..+.++++|+.|+
T Consensus 445 ~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 524 (570)
T 2z63_A 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIW 524 (570)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEE
Confidence 79999999999998 6899999999999999999999999987 789999999999999999998888999999999999
Q ss_pred cccccCcCCCCccc
Q 004689 301 VQNNMLSGTVPSSL 314 (736)
Q Consensus 301 l~~N~l~g~~P~~~ 314 (736)
+++|+++|..|...
T Consensus 525 l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 525 LHTNPWDCSCPRID 538 (570)
T ss_dssp CCSSCBCCCTTTTH
T ss_pred ecCCcccCCCcchH
Confidence 99999999988643
No 357
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.11 E-value=6.7e-11 Score=126.60 Aligned_cols=170 Identities=17% Similarity=0.216 Sum_probs=122.0
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.++.+..|.++.|.+..+++ +..+..++.|.+..+.+..... +...-.+..-... + |. ...+.. ...+++
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~-~--n~---l~~~~~-~~~l~~ 244 (347)
T 4fmz_A 175 NLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIG-N--NK---ITDLSP-LANLSQ 244 (347)
T ss_dssp GCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECC-S--SC---CCCCGG-GTTCTT
T ss_pred cCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEcc-C--Cc---cCCCcc-hhcCCC
Confidence 45678899999999999988 7777778888877776532111 1111122111100 0 10 011111 234678
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
|+.|+|++|.+++ + +.+..+++|+.|+|++|++++. +.+..+++|+.|+|++|.+++..|..++.+++|+.|++++|
T Consensus 245 L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 321 (347)
T 4fmz_A 245 LTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQN 321 (347)
T ss_dssp CCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSS
T ss_pred CCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCC
Confidence 9999999999985 3 5688899999999999999875 66888999999999999999888888999999999999999
Q ss_pred cCcCCCCcccccccccccccCCc
Q 004689 305 MLSGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 305 ~l~g~~P~~~~~~~~~l~~~~n~ 327 (736)
++++..|..-+..+..+.+.+|+
T Consensus 322 ~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 322 HITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp SCCCCGGGGGCTTCSEESSSCC-
T ss_pred ccccccChhhhhccceeehhhhc
Confidence 99977674555666778888875
No 358
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.11 E-value=8.3e-11 Score=137.83 Aligned_cols=151 Identities=19% Similarity=0.186 Sum_probs=100.6
Q ss_pred cceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 147 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
+.+..|+|+.|.++.+||. +..+..++.|.++.+.+.. ..|- . ...+++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-------------------~~~~-----~-----~~~l~~L 75 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK-------------------LEPE-----L-----CQKLPML 75 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCC-------------------CCTT-----H-----HHHCTTC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCc-------------------cCHH-----H-----HhcccCc
Confidence 4677889999999998875 7888888888888776542 1110 0 0123567
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
+.|+|++|++++..+..|.++++|++|+|++|++++.+| .|++|++|++|+|++|.+++..|..++++++|+.|++++|
T Consensus 76 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 777777777774333357777777777777777776665 5677777777777777777777777777777777777777
Q ss_pred cCcCCCCcccc----cccccccccCC
Q 004689 305 MLSGTVPSSLL----SKNVVLNYAGN 326 (736)
Q Consensus 305 ~l~g~~P~~~~----~~~~~l~~~~n 326 (736)
.+++..|..+. ..+..+.+.+|
T Consensus 156 ~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 156 KIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred cccccCHHHhhccccccccEEECCCC
Confidence 77754444331 23455555555
No 359
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=2.3e-10 Score=116.88 Aligned_cols=128 Identities=20% Similarity=0.116 Sum_probs=97.3
Q ss_pred cccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCc--eeeEeeeeeeCCeEEEEEEecCCCCHHHH
Q 004689 417 GSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEEGRSVLVYEFMHNGTLKEH 494 (736)
Q Consensus 417 G~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~ 494 (736)
+.|..+.||++...+|..+++|+.... ....+..|+++++.+.+.+ +.+++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 455669999998777888999997543 2356889999999996545 456888888888899999999998884
Q ss_pred hhcccccccccCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------------
Q 004689 495 LYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC---------------------------------------------- 528 (736)
Q Consensus 495 l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~---------------------------------------------- 528 (736)
.. . .. ...++.++++.|..||+..
T Consensus 104 ~~-~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 104 SS-H------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp TS-C------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred cC-c------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 21 1 11 1246677788888888742
Q ss_pred ---------CCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 529 ---------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 529 ---------~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
...++|+|++|.|||++.++.+.|+|||.+.
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999877667799999874
No 360
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.10 E-value=2.6e-10 Score=121.39 Aligned_cols=174 Identities=28% Similarity=0.236 Sum_probs=110.6
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceE-EecCCCCCc
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQPS 224 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v-~c~~~~~~~ 224 (736)
++.+..|.++.|.++.+|+.+. ..++.|.++.+.+.......+...-.+..-... ++.- ...++ ......+ +
T Consensus 101 l~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~-~n~l---~~~~~~~~~~~~l-~ 173 (332)
T 2ft3_A 101 LRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMG-GNPL---ENSGFEPGAFDGL-K 173 (332)
T ss_dssp CTTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECC-SCCC---BGGGSCTTSSCSC-C
T ss_pred cCCCCEEECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECC-CCcc---ccCCCCcccccCC-c
Confidence 4567778888888888877655 556666666665431100001111111100000 0000 00000 0000112 6
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
|+.|+|++|++++ +|..+. ++|++|+|++|++++..+ .+.++++|++|+|++|+|++..|..++.+++|+.|+|++
T Consensus 174 L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 250 (332)
T 2ft3_A 174 LNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDN 250 (332)
T ss_dssp CSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCS
T ss_pred cCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCC
Confidence 7777777777773 666554 688889999999998876 688899999999999999988778899999999999999
Q ss_pred ccCcCCCCccccc--ccccccccCCcccc
Q 004689 304 NMLSGTVPSSLLS--KNVVLNYAGNINLH 330 (736)
Q Consensus 304 N~l~g~~P~~~~~--~~~~l~~~~n~~~c 330 (736)
|+++ .+|..+.. .+..+.+.+|....
T Consensus 251 N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 251 NKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp SCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 9998 88887643 45677778875443
No 361
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.09 E-value=6.5e-11 Score=136.71 Aligned_cols=177 Identities=20% Similarity=0.184 Sum_probs=85.6
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.+|+.+..+..++.|.++.+.+.......+...-.+......+..--...+.. ....+++|
T Consensus 277 l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~----~~~~l~~L 352 (606)
T 3t6q_A 277 FSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG----CLENLENL 352 (606)
T ss_dssp CTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSS----TTTTCTTC
T ss_pred ccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchh----hhhccCcC
Confidence 34566667777777777666666666666666666543211111111111111000000000000000 01223455
Q ss_pred EEEEccCCCCCccC--CcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCcc-ccCccccceeec
Q 004689 226 TVIHLSSKNLTGNI--PSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSS-LMNLPNLRELYV 301 (736)
Q Consensus 226 ~~L~L~~n~l~g~~--p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~l 301 (736)
+.|+|++|.+++.. |..+..+++|++|+|++|++++.+| .+.++++|++|+|++|.+++..|.. +.++++|+.|++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 66666666655443 4455556666666666666655555 4555666666666666665554432 555566666666
Q ss_pred ccccCcCCCCccc--ccccccccccCC
Q 004689 302 QNNMLSGTVPSSL--LSKNVVLNYAGN 326 (736)
Q Consensus 302 ~~N~l~g~~P~~~--~~~~~~l~~~~n 326 (736)
++|.+++..|..+ +..+..+.+.+|
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n 459 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGN 459 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTC
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCC
Confidence 6666654444443 223344455555
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.09 E-value=7.8e-11 Score=135.49 Aligned_cols=147 Identities=20% Similarity=0.201 Sum_probs=116.9
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.+..+..|.+..+.++.+++ +..+..|+.|.++.+.+.. -.| ...+++
T Consensus 41 ~L~~L~~L~l~~n~i~~l~~-l~~l~~L~~L~Ls~N~l~~-------------------~~~------------l~~l~~ 88 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTD-------------------IKP------------LTNLKN 88 (605)
T ss_dssp HHTTCCCCBCTTCCCCCCTT-GGGCTTCCEEECTTSCCCC-------------------CGG------------GGGCTT
T ss_pred cCCCCCEEECcCCCCCCChH-HccCCCCCEEEeeCCCCCC-------------------Chh------------hccCCC
Confidence 35567778888888888864 6667777778777776541 111 123578
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
|+.|+|++|.|++ +| .|..|++|+.|+|++|+|++. +.+.+|++|+.|+|++|.|++. ..++.|++|+.|+|++|
T Consensus 89 L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N 163 (605)
T 1m9s_A 89 LGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDN 163 (605)
T ss_dssp CCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSS
T ss_pred CCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCC
Confidence 9999999999995 44 799999999999999999974 6799999999999999999965 67999999999999999
Q ss_pred cCcCCCCcccccccccccccCCcc
Q 004689 305 MLSGTVPSSLLSKNVVLNYAGNIN 328 (736)
Q Consensus 305 ~l~g~~P~~~~~~~~~l~~~~n~~ 328 (736)
.|++..|-.-+..+..+.+.+|..
T Consensus 164 ~l~~~~~l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 164 QISDIVPLAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp CCCCCGGGTTCTTCCEEECCSSCC
T ss_pred cCCCchhhccCCCCCEEECcCCCC
Confidence 999777744455667788888743
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.08 E-value=1.2e-10 Score=119.79 Aligned_cols=131 Identities=15% Similarity=0.190 Sum_probs=110.4
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.+|| +..+..++.|.++.|.+.. -.+. .. ++|
T Consensus 62 l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-------------------l~~~------------~~-~~L 108 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-------------------LNGI------------PS-ACL 108 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-------------------CTTC------------CC-SSC
T ss_pred CCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-------------------cCcc------------cc-Ccc
Confidence 4688999999999999999 8888888999998887651 1111 01 589
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|++++ ++ .+..+++|+.|+|++|++++. +.+.++++|++|+|++|+|++. ..+..+++|+.|++++|.
T Consensus 109 ~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 109 SRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp CEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred cEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 999999999996 44 699999999999999999986 5789999999999999999976 779999999999999999
Q ss_pred CcCCCCcccc
Q 004689 306 LSGTVPSSLL 315 (736)
Q Consensus 306 l~g~~P~~~~ 315 (736)
+++ .|....
T Consensus 184 ~~~-~~~~~~ 192 (263)
T 1xeu_A 184 CVN-EPVKYQ 192 (263)
T ss_dssp EEC-CCEECC
T ss_pred ccC-Cccccc
Confidence 984 465543
No 364
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.07 E-value=1.2e-10 Score=117.74 Aligned_cols=152 Identities=17% Similarity=0.140 Sum_probs=108.7
Q ss_pred ccceeEEEeec-cCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC
Q 004689 146 LPFVLSFKFGK-TYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 223 (736)
Q Consensus 146 l~~l~~l~l~~-~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~ 223 (736)
++.+..|.++. |.++.+|+. +..+..++.|.++.+.+.. ++.+ . ....+.
T Consensus 79 l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-----------lp~~-------------~----~l~~L~ 130 (239)
T 2xwt_C 79 LSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-----------FPDL-------------T----KVYSTD 130 (239)
T ss_dssp CTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-----------CCCC-------------T----TCCBCC
T ss_pred CcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-----------cccc-------------c----cccccc
Confidence 45777888887 888888764 6677777777777665531 1111 0 001122
Q ss_pred ceEEEEccCC-CCCccCCcccccccccc-cccccccccCCCCCC-CCCCCCCcEEEcCCCC-CCCCCCccccCc-cccce
Q 004689 224 SITVIHLSSK-NLTGNIPSDLTKLSSLV-ELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ-LTGPLPSSLMNL-PNLRE 298 (736)
Q Consensus 224 ~l~~L~L~~n-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~-~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l-~~L~~ 298 (736)
.|+.|+|++| ++++..+..|..+++|+ .|+|++|+++...+. +.. ++|+.|+|++|. |++..+..+.++ ++|+.
T Consensus 131 ~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~ 209 (239)
T 2xwt_C 131 IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSL 209 (239)
T ss_dssp SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSE
T ss_pred cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcE
Confidence 3459999999 88866666788999999 999999999855554 444 889999999994 886666788888 99999
Q ss_pred eecccccCcCCCCcccccccccccccCCc
Q 004689 299 LYVQNNMLSGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 299 L~l~~N~l~g~~P~~~~~~~~~l~~~~n~ 327 (736)
|++++|+++ .+|...+.....+.+.++.
T Consensus 210 L~l~~N~l~-~l~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 210 LDVSQTSVT-ALPSKGLEHLKELIARNTW 237 (239)
T ss_dssp EECTTCCCC-CCCCTTCTTCSEEECTTC-
T ss_pred EECCCCccc-cCChhHhccCceeeccCcc
Confidence 999999998 6777766666666665553
No 365
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.07 E-value=1.1e-10 Score=132.33 Aligned_cols=176 Identities=15% Similarity=0.122 Sum_probs=127.3
Q ss_pred ccceeEEEeeccCCC-CCCCcc-----chhhhhhhhccCCCCc--hHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEe
Q 004689 146 LPFVLSFKFGKTYDS-SRGPLL-----NAMEINKYLERNDGSI--DGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC 217 (736)
Q Consensus 146 l~~l~~l~l~~~~~s-~lpP~i-----n~~e~~~~l~~~~~~~--~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c 217 (736)
.+.+..|.++.|.++ .+|..+ ..++.++.+.+..+.+ ....+..+-....+..-... + |. ...+.|
T Consensus 246 ~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~-~--n~---l~~~~~ 319 (520)
T 2z7x_B 246 HTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVS-G--TR---MVHMLC 319 (520)
T ss_dssp TSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEE-S--SC---CCCCCC
T ss_pred hCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcC-C--Cc---cccccc
Confidence 347888999999988 788777 7777777777666654 11223222111111111000 0 00 000111
Q ss_pred cCCCCCceEEEEccCCCCCccCCcccccccccccccccccccCC--CCC-CCCCCCCCcEEEcCCCCCCCCCCcc-ccCc
Q 004689 218 NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTG--PIP-DFSGCPDLRIIHLEDNQLTGPLPSS-LMNL 293 (736)
Q Consensus 218 ~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~--~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l 293 (736)
...+++|+.|+|++|++++.+|..+..+++|++|+|++|++++ .+| .+.++++|++|+|++|.+++.+|.. +..+
T Consensus 320 -~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l 398 (520)
T 2z7x_B 320 -PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWT 398 (520)
T ss_dssp -CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCC
T ss_pred -hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccC
Confidence 0346789999999999999899999999999999999999997 445 5889999999999999999867764 8889
Q ss_pred cccceeecccccCcCCCCcccccccccccccCCcc
Q 004689 294 PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNIN 328 (736)
Q Consensus 294 ~~L~~L~l~~N~l~g~~P~~~~~~~~~l~~~~n~~ 328 (736)
++|+.|+|++|.+++.+|..+...+..+.+++|..
T Consensus 399 ~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l 433 (520)
T 2z7x_B 399 KSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKI 433 (520)
T ss_dssp TTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCC
T ss_pred ccCCEEECcCCCCCcchhhhhcccCCEEECCCCcc
Confidence 99999999999999888888776777788888743
No 366
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.07 E-value=9.7e-11 Score=123.47 Aligned_cols=170 Identities=23% Similarity=0.276 Sum_probs=115.5
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.++.+..|.+..+.++.+| .+..+..++.|.++.+.+.... .+.....+..-... ++. ...+. ....+++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~--~~~~l~~L~~L~L~-~n~-----l~~~~-~~~~l~~ 108 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELS-GNP-----LKNVS-AIAGLQS 108 (308)
T ss_dssp HHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECC-SCC-----CSCCG-GGTTCTT
T ss_pred HcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCCCh--hHccCCCCCEEEcc-CCc-----CCCch-hhcCCCC
Confidence 3567889999999999986 5777888888999888764211 12222222211110 000 01111 1234678
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
|+.|+|++|++++ +|. +..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +|. +..+++|+.|+|++|
T Consensus 109 L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 109 IKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDN 183 (308)
T ss_dssp CCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSS
T ss_pred CCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCC
Confidence 8889999888885 443 8888889999999998887655 8888889999999998885 444 888889999999999
Q ss_pred cCcCCCCcccccccccccccCCccc
Q 004689 305 MLSGTVPSSLLSKNVVLNYAGNINL 329 (736)
Q Consensus 305 ~l~g~~P~~~~~~~~~l~~~~n~~~ 329 (736)
.+++..|-.-+..+..+.+.+|...
T Consensus 184 ~l~~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 184 KISDISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred ccCcChhhcCCCCCCEEEccCCccC
Confidence 8885444333445566777777443
No 367
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.06 E-value=2.2e-10 Score=110.16 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=85.7
Q ss_pred CceEEEEccCCCCCccCCccccccc-ccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLS-SLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
.+|+.|+|++|+++ .+|. +..+. +|++|+|++|.|++. +.+.++++|++|+|++|+|++..|..++.+++|+.|+|
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 58999999999999 5654 66665 999999999999987 88999999999999999999654455599999999999
Q ss_pred ccccCcCCCCc--ccc--cccccccccCCcccc
Q 004689 302 QNNMLSGTVPS--SLL--SKNVVLNYAGNINLH 330 (736)
Q Consensus 302 ~~N~l~g~~P~--~~~--~~~~~l~~~~n~~~c 330 (736)
++|.++ .+|. .+. ..+..+.+.+|+...
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC
Confidence 999996 7776 442 345678888886543
No 368
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.06 E-value=1.1e-10 Score=112.38 Aligned_cols=37 Identities=5% Similarity=-0.115 Sum_probs=20.6
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCC
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGS 181 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~ 181 (736)
....+..|.++.|.++.+|.+......++.|.++.|.
T Consensus 17 ~~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~ 53 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNE 53 (176)
T ss_dssp CTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSC
T ss_pred CcCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCC
Confidence 3456778888888877774432222234444444443
No 369
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.06 E-value=2.3e-10 Score=130.32 Aligned_cols=145 Identities=18% Similarity=0.148 Sum_probs=81.1
Q ss_pred cceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 147 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
+.+..|.++.|.++.+|+ +.. .++.|.++.|.+.. +.. ..-.+...+.. + | ...++.. .+++|+
T Consensus 100 ~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~--lp~--~l~~L~~L~Ls-~--N---~l~~lp~---~l~~L~ 163 (571)
T 3cvr_A 100 ASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTM--LPE--LPALLEYINAD-N--N---QLTMLPE---LPTSLE 163 (571)
T ss_dssp TTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSC--CCC--CCTTCCEEECC-S--S---CCSCCCC---CCTTCC
T ss_pred CCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCC--CCC--cCccccEEeCC-C--C---ccCcCCC---cCCCcC
Confidence 567788888888888888 443 66677777776542 000 00000000000 0 0 0011110 234667
Q ss_pred EEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCC-------cEEEcCCCCCCCCCCccccCcccccee
Q 004689 227 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDL-------RIIHLEDNQLTGPLPSSLMNLPNLREL 299 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L-------~~L~Ls~N~l~g~~p~~~~~l~~L~~L 299 (736)
.|+|++|+|++ +|. |. ++|+.|+|++|+|+..++ +.+ +| +.|+|++|+|+ .+|..+.++++|+.|
T Consensus 164 ~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L 235 (571)
T 3cvr_A 164 VLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTI 235 (571)
T ss_dssp EEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEE
T ss_pred EEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEE
Confidence 77777777764 665 54 667777777777764333 433 45 67777777776 566666667777777
Q ss_pred ecccccCcCCCCcccc
Q 004689 300 YVQNNMLSGTVPSSLL 315 (736)
Q Consensus 300 ~l~~N~l~g~~P~~~~ 315 (736)
+|++|+|+|.+|..+.
T Consensus 236 ~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 236 ILEDNPLSSRIRESLS 251 (571)
T ss_dssp ECCSSSCCHHHHHHHH
T ss_pred EeeCCcCCCcCHHHHH
Confidence 7777777766666553
No 370
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.05 E-value=6.9e-10 Score=126.37 Aligned_cols=94 Identities=22% Similarity=0.292 Sum_probs=46.2
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCcccc------
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL------ 296 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L------ 296 (736)
++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++. |.|. ++|++|+|++|+|+ .+|. +.. +|
T Consensus 140 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~l-p~l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~ 208 (571)
T 3cvr_A 140 ALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFL-PELP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEET 208 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-CCCC--TTCCEEECCSSCCS-SCCC-CC----------C
T ss_pred ccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCc-chhh--CCCCEEECcCCCCC-chhh-HHH--hhhccccc
Confidence 345555555555553 444 345555555555555552 2233 55555555555555 4444 333 44
Q ss_pred -ceeecccccCcCCCCccccc--ccccccccCCcc
Q 004689 297 -RELYVQNNMLSGTVPSSLLS--KNVVLNYAGNIN 328 (736)
Q Consensus 297 -~~L~l~~N~l~g~~P~~~~~--~~~~l~~~~n~~ 328 (736)
+.|+|++|+|+ .+|..++. .+..+.+.+|+.
T Consensus 209 L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 209 EIFFRCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp CEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred ceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 55555555555 45554433 224445555543
No 371
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.05 E-value=2.5e-10 Score=127.62 Aligned_cols=170 Identities=19% Similarity=0.186 Sum_probs=118.5
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.++ .+..+..++.|.++.+.+....- +...-.+...... -|. ...+.. ...+++|
T Consensus 220 l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~---~n~---l~~~~~-~~~l~~L 289 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG---ANQ---ISNISP-LAGLTAL 289 (466)
T ss_dssp CTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC---SSC---CCCCGG-GTTCTTC
T ss_pred cCCCCEEECCCCCcccch-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECC---CCc---cCcccc-ccCCCcc
Confidence 567888899999888874 46667777788887776532110 1111111111100 000 001000 2345789
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|++++..| +..+++|+.|+|++|++++.+| +..+++|+.|+|++|.+++. ..+.++++|+.|++++|+
T Consensus 290 ~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 290 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCc
Confidence 999999999986433 8889999999999999998877 78899999999999999965 478899999999999999
Q ss_pred CcCCCCcccccccccccccCCcccc
Q 004689 306 LSGTVPSSLLSKNVVLNYAGNINLH 330 (736)
Q Consensus 306 l~g~~P~~~~~~~~~l~~~~n~~~c 330 (736)
+++..|..-+..+..+.+.+|....
T Consensus 365 l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 365 ISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred cCccchhhcCCCCCEEeccCCcccC
Confidence 9988875445566777888886654
No 372
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.02 E-value=3.6e-10 Score=129.36 Aligned_cols=175 Identities=17% Similarity=0.111 Sum_probs=126.0
Q ss_pred cceeEEEeeccCCC-CCCCcc-----chhhhhhhhccCCCCc--hHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEec
Q 004689 147 PFVLSFKFGKTYDS-SRGPLL-----NAMEINKYLERNDGSI--DGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN 218 (736)
Q Consensus 147 ~~l~~l~l~~~~~s-~lpP~i-----n~~e~~~~l~~~~~~~--~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~ 218 (736)
+.+..|.++.|.++ .+|+.+ ..++.+..+....+.. ....+..+-....+...... -|. ...+.|.
T Consensus 276 ~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~---~n~---~~~~~~~ 349 (562)
T 3a79_B 276 RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSIS---DTP---FIHMVCP 349 (562)
T ss_dssp SSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEE---SSC---CCCCCCC
T ss_pred ccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEcc---CCC---cccccCc
Confidence 37888999999988 777766 6677666655544433 22333333222222211100 000 0001111
Q ss_pred CCCCCceEEEEccCCCCCccCCcccccccccccccccccccCCCC--C-CCCCCCCCcEEEcCCCCCCCCCCc-cccCcc
Q 004689 219 SDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--P-DFSGCPDLRIIHLEDNQLTGPLPS-SLMNLP 294 (736)
Q Consensus 219 ~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~ 294 (736)
..+++|+.|+|++|++++.+|..+.++++|+.|+|++|++++.. | .+.++++|++|+|++|++++.+|. .+..++
T Consensus 350 -~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~ 428 (562)
T 3a79_B 350 -PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAE 428 (562)
T ss_dssp -SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCT
T ss_pred -cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcc
Confidence 34678999999999999989999999999999999999999854 4 589999999999999999986775 588899
Q ss_pred ccceeecccccCcCCCCcccccccccccccCCcc
Q 004689 295 NLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNIN 328 (736)
Q Consensus 295 ~L~~L~l~~N~l~g~~P~~~~~~~~~l~~~~n~~ 328 (736)
+|+.|+|++|.+++.+|..+...+..+.+++|..
T Consensus 429 ~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l 462 (562)
T 3a79_B 429 SILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRI 462 (562)
T ss_dssp TCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCC
T ss_pred cCCEEECCCCCCCcchhhhhcCcCCEEECCCCcC
Confidence 9999999999999888887766677788888743
No 373
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.01 E-value=1.2e-09 Score=121.60 Aligned_cols=153 Identities=18% Similarity=0.174 Sum_probs=93.5
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.+| +..+..++.|.++.+.+.... +.....+...... .+.. ...+ ....+++|
T Consensus 105 l~~L~~L~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l~---l~~l~~L~~L~l~-~n~~----~~~~--~~~~l~~L 172 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKLD--VSQNPLLTYLNCARNTLTEID---VSHNTQLTELDCH-LNKK----ITKL--DVTPQTQL 172 (457)
T ss_dssp CTTCCEEECCSSCCSCCC--CTTCTTCCEEECTTSCCSCCC---CTTCTTCCEEECT-TCSC----CCCC--CCTTCTTC
T ss_pred CCcCCEEECCCCcCCeec--CCCCCcCCEEECCCCccceec---cccCCcCCEEECC-CCCc----cccc--ccccCCcC
Confidence 456677777777777764 666666666766666554311 1111011100000 0000 0000 12345678
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|++++ +| +..+++|+.|+|++|++++. .++++++|++|+|++|+|++ +| ++.+++|+.|++++|+
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSC
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCc
Confidence 888888888885 55 77788888888888888875 47778888888888888886 56 7788888888888888
Q ss_pred CcCCCCcccccccc
Q 004689 306 LSGTVPSSLLSKNV 319 (736)
Q Consensus 306 l~g~~P~~~~~~~~ 319 (736)
++| +|...+..+.
T Consensus 245 l~~-~~~~~l~~L~ 257 (457)
T 3bz5_A 245 LTE-LDVSTLSKLT 257 (457)
T ss_dssp CSC-CCCTTCTTCC
T ss_pred CCC-cCHHHCCCCC
Confidence 885 4443334333
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.00 E-value=4.6e-10 Score=125.38 Aligned_cols=168 Identities=23% Similarity=0.253 Sum_probs=101.3
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.++.+..|.++.|.++.+++ +..+..++.|.++.+.+....- +...-.+...... + |. ...+. ....+++
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~-~--n~---l~~~~-~l~~l~~ 244 (466)
T 1o6v_A 175 NLTTLERLDISSNKVSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLN-G--NQ---LKDIG-TLASLTN 244 (466)
T ss_dssp TCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECC-S--SC---CCCCG-GGGGCTT
T ss_pred cCCCCCEEECcCCcCCCChh-hccCCCCCEEEecCCccccccc--ccccCCCCEEECC-C--CC---cccch-hhhcCCC
Confidence 35667778888887777644 5666667777776665532100 1111111111100 0 00 00000 1123467
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
|+.|+|++|.+++..| +..+++|+.|+|++|.+++..+ +.++++|+.|+|++|++++..| ++.+++|+.|+|++|
T Consensus 245 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n 319 (466)
T 1o6v_A 245 LTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 319 (466)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSS
T ss_pred CCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCC
Confidence 7888888888775433 7777788888888888777655 7777788888888888775443 777778888888888
Q ss_pred cCcCCCCcccccccccccccCCc
Q 004689 305 MLSGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 305 ~l~g~~P~~~~~~~~~l~~~~n~ 327 (736)
++++..|..-+..+..+.+.+|.
T Consensus 320 ~l~~~~~~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 320 NISDISPVSSLTKLQRLFFYNNK 342 (466)
T ss_dssp CCSCCGGGGGCTTCCEEECCSSC
T ss_pred cCCCchhhccCccCCEeECCCCc
Confidence 88766664445555666666664
No 375
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.3e-09 Score=117.28 Aligned_cols=140 Identities=16% Similarity=0.304 Sum_probs=105.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEec--cCC-cccchhhhhHHHHHhhcC--CCceeeEeeeeeeC---CeEEEEEEe
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLT--SNS-YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEE---GRSVLVYEF 485 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~--~~~-~~~~~~~~~E~~il~~l~--HpnIv~l~~~~~~~---~~~~lV~e~ 485 (736)
+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+++++.+. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46899999999999876 5788899865 322 123457889999999996 45678899988776 457999999
Q ss_pred cCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 004689 486 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------- 528 (736)
Q Consensus 486 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~------------------------------------- 528 (736)
++|..+.+.. ...++...+..++.++++.|..||+..
T Consensus 123 v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 123 VSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred cCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9998774422 123567777889999999999999831
Q ss_pred ------------------CCceecCCCCCCCEEEcCCCc--EEEEeecCCcc
Q 004689 529 ------------------VPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKF 560 (736)
Q Consensus 529 ------------------~~~iiHrDikp~NILl~~~~~--~kl~DFGla~~ 560 (736)
...++|||+++.|||++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 376
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.98 E-value=1.2e-10 Score=123.35 Aligned_cols=138 Identities=17% Similarity=0.141 Sum_probs=107.7
Q ss_pred ccceeEEEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 146 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
++.+..|.++.|.++.++|. +..+..++.|.++.|.+.. ..+- .. ...+++
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-------------------~~~~-----~~----~~~l~~ 170 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-------------------VNFA-----EL----AASSDT 170 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE-------------------EEGG-----GG----GGGTTT
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc-------------------ccHH-----HH----hhccCc
Confidence 35678888888888888774 6677777777777766541 0000 00 012468
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
|+.|+|++|++++. |. ...+++|++|+|++|++++.++.+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 171 L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N 247 (317)
T 3o53_A 171 LEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGN 247 (317)
T ss_dssp CCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTC
T ss_pred CCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCC
Confidence 99999999999954 43 44699999999999999998888999999999999999999 68888999999999999999
Q ss_pred cCc-CCCCccc
Q 004689 305 MLS-GTVPSSL 314 (736)
Q Consensus 305 ~l~-g~~P~~~ 314 (736)
.++ +.+|..+
T Consensus 248 ~~~~~~~~~~~ 258 (317)
T 3o53_A 248 GFHCGTLRDFF 258 (317)
T ss_dssp CCBHHHHHHHH
T ss_pred CccCcCHHHHH
Confidence 998 6666555
No 377
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.97 E-value=1e-09 Score=126.35 Aligned_cols=84 Identities=31% Similarity=0.353 Sum_probs=47.5
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|++.++ .+++|+.|+|++|+|+ .+|..+.++++|+.|+|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 345555566555553 44 234555666666666654322 4455666666666666 556666666666666666
Q ss_pred cccCcCCCCccc
Q 004689 303 NNMLSGTVPSSL 314 (736)
Q Consensus 303 ~N~l~g~~P~~~ 314 (736)
+|.++|.+|..+
T Consensus 293 ~N~l~~~~~~~l 304 (622)
T 3g06_A 293 GNPLSERTLQAL 304 (622)
T ss_dssp SCCCCHHHHHHH
T ss_pred CCCCCCcCHHHH
Confidence 666665555544
No 378
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.95 E-value=3.5e-09 Score=122.00 Aligned_cols=94 Identities=31% Similarity=0.392 Sum_probs=60.4
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
+|+.|+|++|.|+ .+|.. +++|+.|+|++|+|++. | ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++
T Consensus 202 ~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~l-p--~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~ 270 (622)
T 3g06_A 202 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSL-P--VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYR 270 (622)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCC-C--CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCS
T ss_pred hhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcC-C--CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCC
Confidence 3444444444444 23321 26677778888877763 3 45677888888888888 5665 567788888888
Q ss_pred ccCcCCCCccccc--ccccccccCCccc
Q 004689 304 NMLSGTVPSSLLS--KNVVLNYAGNINL 329 (736)
Q Consensus 304 N~l~g~~P~~~~~--~~~~l~~~~n~~~ 329 (736)
|+|+ .+|..+.. .+..+.+.+|+..
T Consensus 271 N~L~-~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 271 NQLT-RLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp SCCC-SCCGGGGGSCTTCEEECCSCCCC
T ss_pred CCCC-cCCHHHhhccccCEEEecCCCCC
Confidence 8888 77776633 3456677777543
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.95 E-value=2.2e-09 Score=119.57 Aligned_cols=163 Identities=17% Similarity=0.078 Sum_probs=100.1
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
.++.+..|+++.|.++.+| .+..+..++.|.++.+.+.... +.....+..-... -| ...++ ....+++
T Consensus 40 ~l~~L~~L~Ls~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls---~N---~l~~~--~~~~l~~ 107 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDMT-GIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACD---SN---KLTNL--DVTPLTK 107 (457)
T ss_dssp HHTTCCEEECCSSCCCCCT-TGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECC---SS---CCSCC--CCTTCTT
T ss_pred HcCCCCEEEccCCCcccCh-hhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECc---CC---CCcee--ecCCCCc
Confidence 4667888999999988885 5777788888888887765321 1111111111000 00 01111 1234567
Q ss_pred eEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccc
Q 004689 225 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 304 (736)
Q Consensus 225 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 304 (736)
|+.|+|++|++++ +| +..+++|++|+|++|++++. .++++++|++|+|++|...+.+ .++.+++|+.|++++|
T Consensus 108 L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 108 LTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 7777777777775 44 67777777777777777774 2667777777777777665565 3677777777777777
Q ss_pred cCcCCCCcccccccccccccCCc
Q 004689 305 MLSGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 305 ~l~g~~P~~~~~~~~~l~~~~n~ 327 (736)
++++ +|-.-+..+..+.+.+|.
T Consensus 181 ~l~~-l~l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 181 KITE-LDVSQNKLLNRLNCDTNN 202 (457)
T ss_dssp CCCC-CCCTTCTTCCEEECCSSC
T ss_pred ccce-eccccCCCCCEEECcCCc
Confidence 7774 553333444555555553
No 380
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.93 E-value=6.1e-11 Score=129.09 Aligned_cols=181 Identities=14% Similarity=0.137 Sum_probs=118.8
Q ss_pred cccceeEEEeeccCCCC-----CCCccchhhhhhhhccCCCCchHHHHHHHHHH-------------cCCCCcCCCCCCC
Q 004689 145 SLPFVLSFKFGKTYDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISL-------------YSSADWAQEGGDP 206 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~-----lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~-------------~~~~~w~~~~~dp 206 (736)
.++.+..|.|+.|.++. +|..+..+..++.|.++.+.+.......+... ..+...... .+.
T Consensus 92 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~-~n~ 170 (386)
T 2ca6_A 92 KCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG-RNR 170 (386)
T ss_dssp TCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECC-SSC
T ss_pred hCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECC-CCC
Confidence 45688899999999888 66677888889999999999875544444433 233222111 000
Q ss_pred CCCCCCceEE---ecCCCCCceEEEEccCCCCC--c---cCCcccccccccccccccccccC----CCCC-CCCCCCCCc
Q 004689 207 CLPVPWSWLQ---CNSDPQPSITVIHLSSKNLT--G---NIPSDLTKLSSLVELWLDGNSLT----GPIP-DFSGCPDLR 273 (736)
Q Consensus 207 c~~~~~~~v~---c~~~~~~~l~~L~L~~n~l~--g---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p-~~~~l~~L~ 273 (736)
- ...++. -.....++|+.|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+| .+..+++|+
T Consensus 171 l---~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 171 L---ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp C---TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred C---CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 0 000000 00012357888888888887 3 34447778888888888888885 4455 577788888
Q ss_pred EEEcCCCCCCCC----CCccc--cCccccceeecccccCcC----CCCccc---ccccccccccCCccc
Q 004689 274 IIHLEDNQLTGP----LPSSL--MNLPNLRELYVQNNMLSG----TVPSSL---LSKNVVLNYAGNINL 329 (736)
Q Consensus 274 ~L~Ls~N~l~g~----~p~~~--~~l~~L~~L~l~~N~l~g----~~P~~~---~~~~~~l~~~~n~~~ 329 (736)
+|+|++|.|++. +|..+ +.+++|+.|+|++|.+++ .+|..+ +..+..+.+.+|...
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 888888888755 56666 347888888888888886 477766 345567777777544
No 381
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.92 E-value=1.9e-09 Score=119.91 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=24.3
Q ss_pred cccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCch
Q 004689 145 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSID 183 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~ 183 (736)
.++.+..|.++.|.++.+|+.+ ..++.|.++.|.+.
T Consensus 235 ~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~N~l~ 270 (454)
T 1jl5_A 235 NLPFLTTIYADNNLLKTLPDLP---PSLEALNVRDNYLT 270 (454)
T ss_dssp TCTTCCEEECCSSCCSSCCSCC---TTCCEEECCSSCCS
T ss_pred CCCCCCEEECCCCcCCcccccc---cccCEEECCCCccc
Confidence 4567788888888888887754 34455666665543
No 382
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86 E-value=1.3e-09 Score=114.39 Aligned_cols=186 Identities=22% Similarity=0.261 Sum_probs=120.3
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcC-CCc--eeeEeeeeeeCC---eEEEEEEecC
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRN--LVQFLGYCQEEG---RSVLVYEFMH 487 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-Hpn--Iv~l~~~~~~~~---~~~lV~e~~~ 487 (736)
+.++.|....||+.. ..+++|+.... .....+.+|+++|+.+. +.. +.+++......+ ..++||++++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458899999999863 56899985422 23467889999998883 332 345555544333 3478999999
Q ss_pred CCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 004689 488 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG---------------------------------------- 527 (736)
Q Consensus 488 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~---------------------------------------- 527 (736)
|.+|.+... ..++...+..++.++++.|..||+.
T Consensus 100 G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 100 GVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 988765432 2355666677788888888888861
Q ss_pred ---------------CCCceecCCCCCCCEEEcC--CCcEEEEeecCCccccCCCCcceeccc-----c---------cc
Q 004689 528 ---------------CVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGASHVSSIVR-----G---------TV 576 (736)
Q Consensus 528 ---------------~~~~iiHrDikp~NILl~~--~~~~kl~DFGla~~~~~~~~~~~~~~~-----g---------t~ 576 (736)
..+.++|+|++|.||+++. ...+.|+||+.+.... .......... + ..
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~-~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISD-PDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEEC-TTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCC-hHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1146899999999999998 5568899999886431 1111100000 0 00
Q ss_pred cccC-ccccccCcCCCcchhHHHHHHHHHHHhCCCcCcc
Q 004689 577 GYLD-PEYYISQQLTDKSDVYSFGVILLELISGQEAISN 614 (736)
Q Consensus 577 ~Y~a-PE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~~ 614 (736)
++.. |+.... .....+.|++|.++|++.+|+.+|..
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 1111 221111 11225899999999999999988753
No 383
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.86 E-value=4e-09 Score=112.68 Aligned_cols=145 Identities=17% Similarity=0.222 Sum_probs=90.6
Q ss_pred ccceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCce
Q 004689 146 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 225 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l 225 (736)
++.+..|.++.|.++.+++ +..+..++.|.++.+.+... .. ...+++|
T Consensus 65 ~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~--~~-----------------------------~~~l~~L 112 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDI--SA-----------------------------LQNLTNL 112 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GG-----------------------------GTTCTTC
T ss_pred cCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCc--hH-----------------------------HcCCCcC
Confidence 4577888999999998888 77777888888877765410 00 1223567
Q ss_pred EEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccccc
Q 004689 226 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 305 (736)
Q Consensus 226 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 305 (736)
+.|+|++|.+++ +|. +..+++|+.|+|++|...+.++.+.++++|++|++++|.+++..+ +..+++|+.|++++|.
T Consensus 113 ~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 113 RELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp SEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred CEEECcCCcccC-chh-hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 777777777663 333 666777777777777655555566667777777777777664332 6666777777777776
Q ss_pred CcCCCCcccccccccccccCC
Q 004689 306 LSGTVPSSLLSKNVVLNYAGN 326 (736)
Q Consensus 306 l~g~~P~~~~~~~~~l~~~~n 326 (736)
+++..+-.-+..+..+.+.+|
T Consensus 189 l~~~~~~~~l~~L~~L~l~~n 209 (347)
T 4fmz_A 189 IEDISPLASLTSLHYFTAYVN 209 (347)
T ss_dssp CCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccCCCccceeecccC
Confidence 663222222233344444444
No 384
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.84 E-value=9.6e-09 Score=114.22 Aligned_cols=138 Identities=29% Similarity=0.413 Sum_probs=91.3
Q ss_pred cceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceE
Q 004689 147 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 226 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~ 226 (736)
+.+..|.++.|.++.+| .+..+..++.|.++.|.+.. -| ...++|+
T Consensus 131 ~~L~~L~L~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~--------------------lp-------------~~~~~L~ 176 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKLP-ELQNSSFLKIIDVDNNSLKK--------------------LP-------------DLPPSLE 176 (454)
T ss_dssp TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSC--------------------CC-------------CCCTTCC
T ss_pred CCCCEEECcCCCCCCCc-ccCCCCCCCEEECCCCcCcc--------------------cC-------------CCccccc
Confidence 35556666666666655 35555556666655554431 00 0123788
Q ss_pred EEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccC
Q 004689 227 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 306 (736)
Q Consensus 227 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 306 (736)
.|+|++|++++ +| .+.++++|+.|+|++|++++. |.+ .++|++|+|++|.++ .+|. ++.+++|+.|++++|++
T Consensus 177 ~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~--~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l 249 (454)
T 1jl5_A 177 FIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL--PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLL 249 (454)
T ss_dssp EEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC--CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCC
T ss_pred EEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC--cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcC
Confidence 88888888885 66 588888888888888888873 322 247888888888888 6774 78888888888888888
Q ss_pred cCCCCcccccccccccccCCc
Q 004689 307 SGTVPSSLLSKNVVLNYAGNI 327 (736)
Q Consensus 307 ~g~~P~~~~~~~~~l~~~~n~ 327 (736)
+ .+|.. ......+.+.+|.
T Consensus 250 ~-~l~~~-~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 250 K-TLPDL-PPSLEALNVRDNY 268 (454)
T ss_dssp S-SCCSC-CTTCCEEECCSSC
T ss_pred C-ccccc-ccccCEEECCCCc
Confidence 7 46653 2455566666663
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.80 E-value=2.1e-10 Score=124.83 Aligned_cols=162 Identities=14% Similarity=0.060 Sum_probs=112.9
Q ss_pred ccceeEEEeeccCCCCCCCc-----cchh---------hhhhhhccCCCCchHHHHHH----HHHHcCCCCcCCCCCCCC
Q 004689 146 LPFVLSFKFGKTYDSSRGPL-----LNAM---------EINKYLERNDGSIDGVAIVS----VISLYSSADWAQEGGDPC 207 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~-----in~~---------e~~~~l~~~~~~~~~~al~~----l~~~~~~~~w~~~~~dpc 207 (736)
.+.+..|.|+.|.++..++. +..+ ..++.|.++.|.+....+.. ++..-.+...... -|
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~---~n 197 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMV---QN 197 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECC---SS
T ss_pred CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECc---CC
Confidence 46778889999887654432 2222 56777888888775333333 3333233322211 11
Q ss_pred CCCCCce----EEecCCCCCceEEEEccCCCCC----ccCCcccccccccccccccccccCCC----CC-CC--CCCCCC
Q 004689 208 LPVPWSW----LQCNSDPQPSITVIHLSSKNLT----GNIPSDLTKLSSLVELWLDGNSLTGP----IP-DF--SGCPDL 272 (736)
Q Consensus 208 ~~~~~~~----v~c~~~~~~~l~~L~L~~n~l~----g~~p~~~~~l~~L~~L~Ls~N~l~~~----~p-~~--~~l~~L 272 (736)
.. ...+ ..-....+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ++ .+ +++++|
T Consensus 198 ~l-~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L 276 (386)
T 2ca6_A 198 GI-RPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGL 276 (386)
T ss_dssp CC-CHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCC
T ss_pred CC-CHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCe
Confidence 00 0001 0001123578999999999996 67899999999999999999999986 44 45 559999
Q ss_pred cEEEcCCCCCCC----CCCccc-cCccccceeecccccCcCCCC
Q 004689 273 RIIHLEDNQLTG----PLPSSL-MNLPNLRELYVQNNMLSGTVP 311 (736)
Q Consensus 273 ~~L~Ls~N~l~g----~~p~~~-~~l~~L~~L~l~~N~l~g~~P 311 (736)
++|+|++|.|++ .+|..+ .++++|+.|+|++|.+++..|
T Consensus 277 ~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 277 QTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred EEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 999999999997 488888 678999999999999997664
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.80 E-value=5.4e-11 Score=116.79 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=76.1
Q ss_pred CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCC-ccccCccccceee
Q 004689 222 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELY 300 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~ 300 (736)
+++|+.|+|++|.++ .+|..+..+++|++|+|++|++++. |.+.++++|++|+|++|+|++..+ ..+..+++|+.|+
T Consensus 69 l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 69 MENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp HTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred CCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 358999999999999 7888888889999999999999984 578889999999999999984322 4788999999999
Q ss_pred cccccCcCCCCc
Q 004689 301 VQNNMLSGTVPS 312 (736)
Q Consensus 301 l~~N~l~g~~P~ 312 (736)
+++|.+++.+|.
T Consensus 147 l~~N~l~~~~~~ 158 (198)
T 1ds9_A 147 LAGNPLYNDYKE 158 (198)
T ss_dssp ECSCHHHHHHHT
T ss_pred ecCCcccccccc
Confidence 999999877665
No 387
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.74 E-value=6.9e-09 Score=111.27 Aligned_cols=102 Identities=20% Similarity=0.217 Sum_probs=84.7
Q ss_pred CceEEecCCCC--------CceEEEEccCCCCCccCCc-ccccccccccccccccccCCCCC--CCCCCCCCcE-EEcCC
Q 004689 212 WSWLQCNSDPQ--------PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRI-IHLED 279 (736)
Q Consensus 212 ~~~v~c~~~~~--------~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~-L~Ls~ 279 (736)
+.-|.|+...+ ++++.|+|++|+|+ .+|+ .|.+|++|++|+|++|++.+.+| .|.+|++|.. +.+++
T Consensus 11 ~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 11 NRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 56689975542 47899999999999 5554 78999999999999999988777 5889998865 67788
Q ss_pred CCCCCCCCccccCccccceeecccccCcCCCCccc
Q 004689 280 NQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL 314 (736)
Q Consensus 280 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~P~~~ 314 (736)
|+|++..|..|.++++|+.|++++|.+++..+...
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 124 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT
T ss_pred CcccccCchhhhhccccccccccccccccCCchhh
Confidence 99998778899999999999999999994433333
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.73 E-value=5e-10 Score=119.08 Aligned_cols=175 Identities=14% Similarity=0.111 Sum_probs=104.1
Q ss_pred cceeEEEeeccCCCCCCCccchhhhhhhhccCCCCchHHHHHHHHHHc-CCCCcCCCCCCCCCCCCCceEE-ecCCCCCc
Q 004689 147 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLY-SSADWAQEGGDPCLPVPWSWLQ-CNSDPQPS 224 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~-~~~~w~~~~~dpc~~~~~~~v~-c~~~~~~~ 224 (736)
+.+..+.+..|.++..+|.+..+..++.|.++.+.+...++..+-... .+..-... -|. ..... -....+++
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~---~~~---l~~~~~~~l~~~~~ 143 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE---GLR---LSDPIVNTLAKNSN 143 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECT---TCB---CCHHHHHHHTTCTT
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCc---Ccc---cCHHHHHHHhcCCC
Confidence 456677888888888887777788888888888877655444332221 12211110 010 00000 00112457
Q ss_pred eEEEEccCC-CCCcc-CCccccccccccccccccc-ccCCC-CC-CCCCCC-CCcEEEcCCC--CCC-CCCCccccCccc
Q 004689 225 ITVIHLSSK-NLTGN-IPSDLTKLSSLVELWLDGN-SLTGP-IP-DFSGCP-DLRIIHLEDN--QLT-GPLPSSLMNLPN 295 (736)
Q Consensus 225 l~~L~L~~n-~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p-~~~~l~-~L~~L~Ls~N--~l~-g~~p~~~~~l~~ 295 (736)
|+.|+|++| .+++. ++..+.++++|++|+|++| .+++. ++ .+.+++ +|++|+|++| .++ +.+|..+.++++
T Consensus 144 L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~ 223 (336)
T 2ast_B 144 LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 223 (336)
T ss_dssp CSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTT
T ss_pred CCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCC
Confidence 777777777 56652 5555667777777777777 77653 34 356677 7777777777 444 455666667777
Q ss_pred cceeeccccc-CcCCCCcccc--cccccccccCCc
Q 004689 296 LRELYVQNNM-LSGTVPSSLL--SKNVVLNYAGNI 327 (736)
Q Consensus 296 L~~L~l~~N~-l~g~~P~~~~--~~~~~l~~~~n~ 327 (736)
|+.|+|++|. +++..+..+. ..+..+.+.+|.
T Consensus 224 L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 224 LVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 7777777777 5655555543 234555566654
No 389
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.71 E-value=4.1e-10 Score=119.75 Aligned_cols=177 Identities=16% Similarity=0.165 Sum_probs=122.1
Q ss_pred cccceeEEEeeccCCCC--CCCccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCC
Q 004689 145 SLPFVLSFKFGKTYDSS--RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 222 (736)
Q Consensus 145 ~l~~l~~l~l~~~~~s~--lpP~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~ 222 (736)
.++.+..|.++.|.++. +|..+..+..++.|.++.+.+.......+.....+...... -|......++.-....+
T Consensus 91 ~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~---~~~~l~~~~l~~~~~~~ 167 (336)
T 2ast_B 91 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS---GCSGFSEFALQTLLSSC 167 (336)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT---TCBSCCHHHHHHHHHHC
T ss_pred cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECC---CCCCCCHHHHHHHHhcC
Confidence 45678888998888764 66778888888888888888876666666554344333211 11000000111001224
Q ss_pred CceEEEEccCC-CCCcc-CCccccccc-cccccccccc--ccC-CCCC-CCCCCCCCcEEEcCCCC-CCCCCCccccCcc
Q 004689 223 PSITVIHLSSK-NLTGN-IPSDLTKLS-SLVELWLDGN--SLT-GPIP-DFSGCPDLRIIHLEDNQ-LTGPLPSSLMNLP 294 (736)
Q Consensus 223 ~~l~~L~L~~n-~l~g~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p-~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~ 294 (736)
++|+.|+|++| ++++. ++..+..++ +|++|+|++| .++ +.+| .+.++++|++|+|++|. +++..+..+++++
T Consensus 168 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~ 247 (336)
T 2ast_B 168 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN 247 (336)
T ss_dssp TTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT
T ss_pred CCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCC
Confidence 68999999999 99865 677788899 9999999999 555 4455 46779999999999999 7777888899999
Q ss_pred ccceeecccccCcCCCCcc---c--ccccccccccCC
Q 004689 295 NLRELYVQNNMLSGTVPSS---L--LSKNVVLNYAGN 326 (736)
Q Consensus 295 ~L~~L~l~~N~l~g~~P~~---~--~~~~~~l~~~~n 326 (736)
+|+.|+|++|. +..|.. + +..+..+.+.||
T Consensus 248 ~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 248 YLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp TCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 99999999996 233332 2 234456666666
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.68 E-value=3.5e-10 Score=110.97 Aligned_cols=104 Identities=27% Similarity=0.264 Sum_probs=79.9
Q ss_pred CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 222 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
+++|+.|+|++|++++ +| .+..+++|++|+|++|+++..++.+..+++|++|+|++|+|++ +| .++.+++|+.|+|
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 5688999999999985 77 8888999999999999988543345667889999999999985 55 6888889999999
Q ss_pred ccccCcCCCCc--cc--ccccccccccCCcccc
Q 004689 302 QNNMLSGTVPS--SL--LSKNVVLNYAGNINLH 330 (736)
Q Consensus 302 ~~N~l~g~~P~--~~--~~~~~~l~~~~n~~~c 330 (736)
++|+++ .+|. .+ +..+..+.+.+|+..+
T Consensus 123 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 123 SNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp SEEECC-CHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CCCcCC-chhHHHHHhcCCCCCEEEecCCcccc
Confidence 999988 4443 22 2345667777775543
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.64 E-value=2.6e-09 Score=115.10 Aligned_cols=141 Identities=18% Similarity=0.161 Sum_probs=72.8
Q ss_pred cceeEEEeeccCCCCCCCc-----cchhh-hhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCC
Q 004689 147 PFVLSFKFGKTYDSSRGPL-----LNAME-INKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSD 220 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lpP~-----in~~e-~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~ 220 (736)
+.+..|+|+.|.++..++. +..+. .++.|.++.|.+.......+...+..
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~------------------------ 77 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAA------------------------ 77 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHT------------------------
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhc------------------------
Confidence 3478899999998888862 33333 67778888887764434444333110
Q ss_pred CCCceEEEEccCCCCCccCCcccccc-----cccccccccccccCCCCC-C----CCC-CCCCcEEEcCCCCCCCCC---
Q 004689 221 PQPSITVIHLSSKNLTGNIPSDLTKL-----SSLVELWLDGNSLTGPIP-D----FSG-CPDLRIIHLEDNQLTGPL--- 286 (736)
Q Consensus 221 ~~~~l~~L~L~~n~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p-~----~~~-l~~L~~L~Ls~N~l~g~~--- 286 (736)
..++|+.|+|++|++++..+..+... ++|++|+|++|++++..+ . +.. .++|++|+|++|.|++..
T Consensus 78 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~ 157 (362)
T 3goz_A 78 IPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDE 157 (362)
T ss_dssp SCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHH
T ss_pred cCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHH
Confidence 01245555555555554444433332 455555555555554433 1 222 245555555555555322
Q ss_pred -CccccCcc-ccceeecccccCcCCCC
Q 004689 287 -PSSLMNLP-NLRELYVQNNMLSGTVP 311 (736)
Q Consensus 287 -p~~~~~l~-~L~~L~l~~N~l~g~~P 311 (736)
+..+..++ +|+.|+|++|++++..+
T Consensus 158 l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 158 LIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHHHhcCCccccEeeecCCCCchhhH
Confidence 22223333 55555555555554433
No 392
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.58 E-value=6.2e-09 Score=112.15 Aligned_cols=152 Identities=19% Similarity=0.239 Sum_probs=109.6
Q ss_pred EEeeccCCCCCCCccchh-hhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCC-ceEEEE
Q 004689 152 FKFGKTYDSSRGPLLNAM-EINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP-SITVIH 229 (736)
Q Consensus 152 l~l~~~~~s~lpP~in~~-e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~-~l~~L~ 229 (736)
+.++.|.++.+.|.+-.. ..++.|.++.+.+.......+...+. ..+ +|+.|+
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~-------------------------~~~~~L~~L~ 57 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFA-------------------------NTPASVTSLN 57 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH-------------------------TCCTTCCEEE
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHH-------------------------hCCCceeEEE
Confidence 456777777766664433 34788888888776433322222211 123 799999
Q ss_pred ccCCCCCccCCcccccc-----cccccccccccccCCCCCC-----CCCC-CCCcEEEcCCCCCCCCCCccccC-----c
Q 004689 230 LSSKNLTGNIPSDLTKL-----SSLVELWLDGNSLTGPIPD-----FSGC-PDLRIIHLEDNQLTGPLPSSLMN-----L 293 (736)
Q Consensus 230 L~~n~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~-----~~~l-~~L~~L~Ls~N~l~g~~p~~~~~-----l 293 (736)
|++|++++..+..+..+ ++|++|+|++|++++..+. +..+ ++|++|+|++|.|++..+..++. .
T Consensus 58 Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 137 (362)
T 3goz_A 58 LSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLP 137 (362)
T ss_dssp CCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSC
T ss_pred CcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCC
Confidence 99999998888888876 9999999999999987773 4455 89999999999999776655443 3
Q ss_pred cccceeecccccCcCCCCccc----c---cccccccccCCcc
Q 004689 294 PNLRELYVQNNMLSGTVPSSL----L---SKNVVLNYAGNIN 328 (736)
Q Consensus 294 ~~L~~L~l~~N~l~g~~P~~~----~---~~~~~l~~~~n~~ 328 (736)
++|+.|+|++|.+++.-+..+ . ..+..+.+.+|..
T Consensus 138 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 138 ASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCG
T ss_pred CceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCC
Confidence 699999999999985444333 1 2456777777743
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.54 E-value=3e-09 Score=118.27 Aligned_cols=105 Identities=23% Similarity=0.162 Sum_probs=77.3
Q ss_pred CCceEEEEccCCCCCcc----CCcccccccccccccccccccCCCCC-CC-----CCCCCCcEEEcCCCCCCCC----CC
Q 004689 222 QPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIP-DF-----SGCPDLRIIHLEDNQLTGP----LP 287 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~-----~~l~~L~~L~Ls~N~l~g~----~p 287 (736)
.++|+.|+|++|++++. ++..+..+++|++|+|++|.+++..+ .+ ...++|++|+|++|.+++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 45888999999988854 67777788899999999998876433 22 2346888999999988865 56
Q ss_pred ccccCccccceeecccccCcCCCCccccc-------ccccccccCC
Q 004689 288 SSLMNLPNLRELYVQNNMLSGTVPSSLLS-------KNVVLNYAGN 326 (736)
Q Consensus 288 ~~~~~l~~L~~L~l~~N~l~g~~P~~~~~-------~~~~l~~~~n 326 (736)
..+..+++|+.|+|++|.+++..+..+.. .+..+.+.+|
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 67777888999999999887654544432 4456666666
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.53 E-value=5.4e-09 Score=116.16 Aligned_cols=162 Identities=19% Similarity=0.199 Sum_probs=87.2
Q ss_pred ccceeEEEeeccCCCCCC-----C-ccchhhhhhhhccCCCCchHHHHHHHHHHcC----CCCcCCCCCCCCCCCC-Cce
Q 004689 146 LPFVLSFKFGKTYDSSRG-----P-LLNAMEINKYLERNDGSIDGVAIVSVISLYS----SADWAQEGGDPCLPVP-WSW 214 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lp-----P-~in~~e~~~~l~~~~~~~~~~al~~l~~~~~----~~~w~~~~~dpc~~~~-~~~ 214 (736)
.+.+..|.++.|.++..+ + +......++.|.++.+.+....+..+...+. +..-+.. ++.-.... ...
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls-~n~i~~~~~~~l 304 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLA-GNELGDEGARLL 304 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECT-TCCCHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECC-CCCCchHHHHHH
Confidence 456777777777765542 1 2223455666777777766555444433321 1111100 00000000 000
Q ss_pred EEecCCCCCceEEEEccCCCCCcc----CCcccccccccccccccccccCCCCC-CCC----C-CCCCcEEEcCCCCCCC
Q 004689 215 LQCNSDPQPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIP-DFS----G-CPDLRIIHLEDNQLTG 284 (736)
Q Consensus 215 v~c~~~~~~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~----~-l~~L~~L~Ls~N~l~g 284 (736)
...-....++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..+ .+. . +++|++|+|++|.+++
T Consensus 305 ~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 305 CETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 000001124677777777777754 45555666777777777777766433 222 1 5677777777777775
Q ss_pred ----CCCccccCccccceeecccccCcC
Q 004689 285 ----PLPSSLMNLPNLRELYVQNNMLSG 308 (736)
Q Consensus 285 ----~~p~~~~~l~~L~~L~l~~N~l~g 308 (736)
.+|..+..+++|+.|+|++|++++
T Consensus 385 ~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 385 SSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred hhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 566667777777777777777763
No 395
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.52 E-value=7.3e-08 Score=92.20 Aligned_cols=140 Identities=18% Similarity=0.162 Sum_probs=78.5
Q ss_pred CCCCcccccCccccccccccccCceeeeccccccCCCCCCCCcHHHHhhceeccCCceEEEEcCCCCCCcceEEEEEeec
Q 004689 19 DPFDRIWESDSLKKANYLVDVAAGTEKVSTKLPIDLRSDELPPQKVMQTAVVGTNGSLTYRLNLDGFPGFGWAVTYFAEI 98 (736)
Q Consensus 19 D~~dR~W~~~~~~~~~~~~~~~~~~~~~st~~~i~~~~~~~pP~~v~~ta~t~~~~~~~~~~~~~~~~~~~~~~~~Fae~ 98 (736)
|..+|.|.++..... .... .... ..+.....+..|..|+|||=.. ..+++|..+.+. +..+.+-+||+|+
T Consensus 19 d~~gr~w~~D~~~~~----~g~~--~~~~--~~~~~~~~~~~~~~lY~TaR~~-~~~~tY~f~v~~-~G~Y~VrLhF~ei 88 (174)
T 2jwp_A 19 DVHGIHYRKDPLEGR----VGRA--SDYG--MKLPILRSNPEDQVLYQTERYN-EDSFGYDIPIKE-EGEYVLVLKFAEV 88 (174)
T ss_dssp ETTTEEECSSCSSTT----CCCC--CCCC--TTSCCSSSCHHHHHTTTCCCCC-CSCEEEEEECCS-CEEEEEEEEEECC
T ss_pred CCCCCEEcCCcCccc----CCcc--cccc--cceEecccCCCCchhhhhhccC-CCCeEEEEEeCC-CeEEEEEEEEecc
Confidence 678999999753110 0111 0001 1111112345688999999775 356778777642 3456677899999
Q ss_pred cCCCCCCceEEEEEeCCCcCCccccccccccccC---cceeccCccccc---------cccceeEEEeeccCCCCCCCcc
Q 004689 99 EDLDPDESRKFRLVLPGQPDVSKAIVNIQENAQG---KYRVYEPGYTNL---------SLPFVLSFKFGKTYDSSRGPLL 166 (736)
Q Consensus 99 ~~~~~~~~R~F~i~~n~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------~l~~l~~l~l~~~~~s~lpP~i 166 (736)
.. ...+.|+|||++||+.+.+. .++...+.. -++......++- .....+.+.|. +.+.-.|+|
T Consensus 89 ~~-~~~~~rvFdV~ing~~~l~~--fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~--p~~~~~a~i 163 (174)
T 2jwp_A 89 YF-AQSQQKVFDVRVNGHTVVKD--LDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFV--KGYYDNPKV 163 (174)
T ss_dssp SC-CCSSSSCEEEEETTEEEEEE--ECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEE--CSSSCSSSE
T ss_pred cc-CCCCCeEeEEEECCEEeecC--cCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEe--ccCCCCcEE
Confidence 74 46789999999999977554 233332221 011010000000 11233445554 334567999
Q ss_pred chhhhhh
Q 004689 167 NAMEINK 173 (736)
Q Consensus 167 n~~e~~~ 173 (736)
||+|+++
T Consensus 164 naIEI~~ 170 (174)
T 2jwp_A 164 CALFIMK 170 (174)
T ss_dssp EEEEEES
T ss_pred EEEEEEe
Confidence 9999864
No 396
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.46 E-value=2.1e-07 Score=99.54 Aligned_cols=137 Identities=18% Similarity=0.132 Sum_probs=64.1
Q ss_pred EEeeccCCCCCCCc-cchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCceEEEEc
Q 004689 152 FKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 230 (736)
Q Consensus 152 l~l~~~~~s~lpP~-in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~l~~L~L 230 (736)
+.+..|.++.++|. +..+..++.|.+..|.+.. .... . . ....++..|++
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~-----------~~~~-------~------~-----~~~~~l~~l~l 135 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH-----------LPDV-------H------K-----IHSLQKVLLDI 135 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCSS-----------CCCC-------T------T-----CCBSSCEEEEE
T ss_pred hcccCCcccccCchhhhhcccccccccccccccc-----------CCch-------h------h-----cccchhhhhhh
Confidence 45556777777664 5666667776666655431 0000 0 0 01123444554
Q ss_pred cC-CCCCccCCccccccc-ccccccccccccCCCCCCCCCCCCCcEEEcCC-CCCCCCCC-ccccCccccceeecccccC
Q 004689 231 SS-KNLTGNIPSDLTKLS-SLVELWLDGNSLTGPIPDFSGCPDLRIIHLED-NQLTGPLP-SSLMNLPNLRELYVQNNML 306 (736)
Q Consensus 231 ~~-n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~Ls~-N~l~g~~p-~~~~~l~~L~~L~l~~N~l 306 (736)
.+ +++....+..+..+. .|+.|+|++|+|+...+......+|+.|+|++ |.++ .+| ..|..+++|+.|+|++|+|
T Consensus 136 ~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l 214 (350)
T 4ay9_X 136 QDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRI 214 (350)
T ss_dssp ESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCC
T ss_pred ccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCc
Confidence 33 334322222333332 35555555555554444333444555555543 3333 333 2445555555555555555
Q ss_pred cCCCCcccccccc
Q 004689 307 SGTVPSSLLSKNV 319 (736)
Q Consensus 307 ~g~~P~~~~~~~~ 319 (736)
+ .+|...+..+.
T Consensus 215 ~-~lp~~~~~~L~ 226 (350)
T 4ay9_X 215 H-SLPSYGLENLK 226 (350)
T ss_dssp C-CCCSSSCTTCC
T ss_pred C-ccChhhhccch
Confidence 5 45544444433
No 397
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.45 E-value=1e-06 Score=91.57 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=59.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCC---ceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
+.||.|.++.||++...+|+.++||+...........+..|++.|+.+++. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 568999999999999888999999996543333346789999999999765 577787764 3589999999987
Q ss_pred H
Q 004689 491 L 491 (736)
Q Consensus 491 L 491 (736)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 398
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.41 E-value=7.1e-07 Score=94.24 Aligned_cols=131 Identities=16% Similarity=0.258 Sum_probs=94.7
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCC----CceeeEeeeeeeCCeEEEEEEecCCC
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH----RNLVQFLGYCQEEGRSVLVYEFMHNG 489 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~H----pnIv~l~~~~~~~~~~~lV~e~~~~g 489 (736)
+.++.|....||+. +..+++|+.... .....+.+|.++|+.+.+ ..+.+++++ +..++||||++|.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 56899999999998 677899986422 223458899999998865 223445544 4568999999998
Q ss_pred CHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCC----------------------------------------
Q 004689 490 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV---------------------------------------- 529 (736)
Q Consensus 490 sL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~---------------------------------------- 529 (736)
++.+... ..++...+..++.++++.|..||+...
T Consensus 113 ~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 113 RITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8864331 224455556677777777777775321
Q ss_pred --------------------CceecCCCCCCCEEEcCCCcEEEEeecCCcc
Q 004689 530 --------------------PAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 560 (736)
Q Consensus 530 --------------------~~iiHrDikp~NILl~~~~~~kl~DFGla~~ 560 (736)
+.++|+|++|.|||++.+..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999876679999998854
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.38 E-value=2.3e-08 Score=107.97 Aligned_cols=138 Identities=20% Similarity=0.140 Sum_probs=90.5
Q ss_pred cceeEEEeeccCCCCCC--CccchhhhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecCCCCCc
Q 004689 147 PFVLSFKFGKTYDSSRG--PLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 224 (736)
Q Consensus 147 ~~l~~l~l~~~~~s~lp--P~in~~e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~~~~~~ 224 (736)
..+..|+|+.|.++... .+..++..++.|.++.|.+.......+...+. . ..++
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~---------~---------------~~~~ 156 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL---------H---------------DQCQ 156 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH---------S---------------TTCC
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH---------h---------------cCCc
Confidence 35666777777655422 33445555666667766665555555443321 0 1136
Q ss_pred eEEEEccCCCCCc----cCCcccccccccccccccccccCCCC----C-CCCCCCCCcEEEcCCCCCCC----CCCcccc
Q 004689 225 ITVIHLSSKNLTG----NIPSDLTKLSSLVELWLDGNSLTGPI----P-DFSGCPDLRIIHLEDNQLTG----PLPSSLM 291 (736)
Q Consensus 225 l~~L~L~~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~----p-~~~~l~~L~~L~Ls~N~l~g----~~p~~~~ 291 (736)
|+.|+|++|.|+. .++..+..+++|++|+|++|.|++.- + .+..+++|++|+|++|.|+. .++..+.
T Consensus 157 L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~ 236 (372)
T 3un9_A 157 ITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAR 236 (372)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHH
T ss_pred cceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHH
Confidence 8888888888874 24445567888888889888887532 2 46667788888998888874 2444555
Q ss_pred CccccceeecccccCcC
Q 004689 292 NLPNLRELYVQNNMLSG 308 (736)
Q Consensus 292 ~l~~L~~L~l~~N~l~g 308 (736)
.+++|+.|+|++|.|+.
T Consensus 237 ~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 237 EHPSLELLHLYFNELSS 253 (372)
T ss_dssp HCSSCCEEECTTSSCCH
T ss_pred hCCCCCEEeccCCCCCH
Confidence 66888888888888874
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=1.1e-07 Score=97.17 Aligned_cols=64 Identities=27% Similarity=0.381 Sum_probs=28.8
Q ss_pred CceEEEEccCCCCCc--cCCcccccccccccccccccccCCCCC--CCCCCCCCcEEEcCCCCCCCCCC
Q 004689 223 PSITVIHLSSKNLTG--NIPSDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLP 287 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~g~~p 287 (736)
++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-. .+.++ +|++|+|++|.|++.+|
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFR 237 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCS
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccC
Confidence 345555555555554 233344445555555555555544311 12222 44555555555444443
No 401
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.26 E-value=3.6e-06 Score=88.16 Aligned_cols=135 Identities=20% Similarity=0.245 Sum_probs=89.6
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCC---ceeeEeeeee-eCCeEEEEEEecCCC
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQ-EEGRSVLVYEFMHNG 489 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~~~~~-~~~~~~lV~e~~~~g 489 (736)
+.++.|....||+. +..+++|+-. .......+..|+++|+.+.+. .+.+.+.++. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888899988 5778999843 222345788999999999652 3556666664 455678999999998
Q ss_pred CHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 004689 490 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG------------------------------------------ 527 (736)
Q Consensus 490 sL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~------------------------------------------ 527 (736)
++.+.... .++......++.++++.|..||+.
T Consensus 99 ~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 99 ILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp ECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred ECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 87653211 112222333333344433333331
Q ss_pred ---------------CCCceecCCCCCCCEEEcC---CCc-EEEEeecCCcc
Q 004689 528 ---------------CVPAIIHRDLKSSNILLDK---HMR-AKVSDFGLSKF 560 (736)
Q Consensus 528 ---------------~~~~iiHrDikp~NILl~~---~~~-~kl~DFGla~~ 560 (736)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2246799999999999997 455 48999998753
No 402
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.19 E-value=3.5e-06 Score=90.13 Aligned_cols=79 Identities=4% Similarity=0.037 Sum_probs=56.5
Q ss_pred ccc-cccCceEEEEEEEC-------CCcEEEEEEeccCC---cccchhhhhHHHHHhhcC-C--CceeeEeeeeeeC---
Q 004689 414 KKI-GSGGFGVVYYGKLK-------DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIH-H--RNLVQFLGYCQEE--- 476 (736)
Q Consensus 414 ~~I-G~G~fG~Vy~~~~~-------~~~~vAvK~l~~~~---~~~~~~~~~E~~il~~l~-H--pnIv~l~~~~~~~--- 476 (736)
+.| +.|....+|+.... +++.+++|+..... ......+..|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999998764 26788999865332 112356889999999884 3 3567788877655
Q ss_pred CeEEEEEEecCCCCHH
Q 004689 477 GRSVLVYEFMHNGTLK 492 (736)
Q Consensus 477 ~~~~lV~e~~~~gsL~ 492 (736)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999986654
No 403
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.19 E-value=7.4e-06 Score=83.85 Aligned_cols=134 Identities=17% Similarity=0.127 Sum_probs=94.4
Q ss_pred cccccCce-EEEEEEEC-CCcEEEEEEeccCCcccchhhhhHHHHHhhcC-CCceeeEeeeeeeCCeEEEEEEecCCCCH
Q 004689 415 KIGSGGFG-VVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 491 (736)
Q Consensus 415 ~IG~G~fG-~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV~e~~~~gsL 491 (736)
.+..|..| .||+.... ++..+++|+-... ....+.+|..+|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34556555 68988765 4667999986432 3456888999998884 33367888999999999999999999887
Q ss_pred HHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 004689 492 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------- 528 (736)
Q Consensus 492 ~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~------------------------------------------- 528 (736)
.+...... .....++.+++..|..||+..
T Consensus 108 ~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 76542111 112234555555666665421
Q ss_pred ------------CCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 529 ------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 529 ------------~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
.+.++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1248999999999999987777799999874
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.18 E-value=6.8e-08 Score=104.32 Aligned_cols=154 Identities=17% Similarity=0.146 Sum_probs=103.4
Q ss_pred ccceeEEEeeccCCCCCCCc-cchh-----hhhhhhccCCCCchHHHHHHHHHHcCCCCcCCCCCCCCCCCCCceEEecC
Q 004689 146 LPFVLSFKFGKTYDSSRGPL-LNAM-----EINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS 219 (736)
Q Consensus 146 l~~l~~l~l~~~~~s~lpP~-in~~-----e~~~~l~~~~~~~~~~al~~l~~~~~~~~w~~~~~dpc~~~~~~~v~c~~ 219 (736)
.+.+..|.|+.|.++..... +..+ ..++.|.++.+.+....+..+...
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~-------------------------- 124 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPV-------------------------- 124 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHH--------------------------
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHH--------------------------
Confidence 34567788888776654322 2111 345566777776655444433322
Q ss_pred CCCCceEEEEccCCCCCccCCcccc-----cccccccccccccccCCC----CC-CCCCCCCCcEEEcCCCCCCCC----
Q 004689 220 DPQPSITVIHLSSKNLTGNIPSDLT-----KLSSLVELWLDGNSLTGP----IP-DFSGCPDLRIIHLEDNQLTGP---- 285 (736)
Q Consensus 220 ~~~~~l~~L~L~~n~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p-~~~~l~~L~~L~Ls~N~l~g~---- 285 (736)
+.+|+.|+|++|+|+..-...|. ..++|++|+|++|.|+.. ++ .+..+++|++|+|++|.|+..
T Consensus 125 --L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~ 202 (372)
T 3un9_A 125 --FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLEL 202 (372)
T ss_dssp --HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHH
T ss_pred --HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHH
Confidence 13689999999999865444443 357899999999999762 22 356788999999999999742
Q ss_pred CCccccCccccceeecccccCcCCCCccc------ccccccccccCCc
Q 004689 286 LPSSLMNLPNLRELYVQNNMLSGTVPSSL------LSKNVVLNYAGNI 327 (736)
Q Consensus 286 ~p~~~~~l~~L~~L~l~~N~l~g~~P~~~------~~~~~~l~~~~n~ 327 (736)
++..+..+++|+.|+|++|.|+..-...+ ...+..+++++|.
T Consensus 203 L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 203 LAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSS
T ss_pred HHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCC
Confidence 45667788899999999999974322222 1345677788884
No 405
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.15 E-value=3.4e-06 Score=89.29 Aligned_cols=92 Identities=22% Similarity=0.273 Sum_probs=77.2
Q ss_pred CCceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCc-EEEcCCCCCCCCCCccccCcccccee
Q 004689 222 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLR-IIHLEDNQLTGPLPSSLMNLPNLREL 299 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L 299 (736)
.++|+.|+|++|+++..-+..|.++++|+.|+|++| ++...+ +|.+|++|+ .|+|.+ +++..-+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 368999999999999444447889999999999998 776555 699999999 999998 7774556799999999999
Q ss_pred ecccccCcCCCCccccc
Q 004689 300 YVQNNMLSGTVPSSLLS 316 (736)
Q Consensus 300 ~l~~N~l~g~~P~~~~~ 316 (736)
+++.|+++ .|+...|.
T Consensus 303 ~l~~n~i~-~I~~~aF~ 318 (329)
T 3sb4_A 303 LATGDKIT-TLGDELFG 318 (329)
T ss_dssp EECSSCCC-EECTTTTC
T ss_pred EeCCCccC-ccchhhhc
Confidence 99999998 77776554
No 406
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.11 E-value=2.8e-07 Score=94.07 Aligned_cols=82 Identities=23% Similarity=0.371 Sum_probs=63.1
Q ss_pred EEccCCCCCccCCc----ccccccccccccccccccCCC--CCC-CCCCCCCcEEEcCCCCCCCCCCccccCcc--ccce
Q 004689 228 IHLSSKNLTGNIPS----DLTKLSSLVELWLDGNSLTGP--IPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLP--NLRE 298 (736)
Q Consensus 228 L~L~~n~l~g~~p~----~~~~l~~L~~L~Ls~N~l~~~--~p~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~ 298 (736)
++++.|... .++. ...++++|+.|+|++|+|++. +|. +..+++|+.|+|++|+|++. ..+..+. +|++
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 555666433 2332 224689999999999999994 454 56899999999999999965 4455555 9999
Q ss_pred eecccccCcCCCCc
Q 004689 299 LYVQNNMLSGTVPS 312 (736)
Q Consensus 299 L~l~~N~l~g~~P~ 312 (736)
|+|++|.+++.+|.
T Consensus 225 L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 225 LWLDGNSLCDTFRD 238 (267)
T ss_dssp EECTTSTTGGGCSS
T ss_pred EEccCCcCccccCc
Confidence 99999999988873
No 407
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.10 E-value=8.3e-06 Score=87.55 Aligned_cols=73 Identities=10% Similarity=0.124 Sum_probs=55.6
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCc--eeeEeeeeeeC-CeEEEEEEecCCCC
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEE-GRSVLVYEFMHNGT 490 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~~~~~~~-~~~~lV~e~~~~gs 490 (736)
+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... +.+++.++... +..++||||++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4578899999999886 4889999986422 35889999999986533 45677776654 66899999999866
Q ss_pred HH
Q 004689 491 LK 492 (736)
Q Consensus 491 L~ 492 (736)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 408
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88 E-value=5e-05 Score=82.42 Aligned_cols=74 Identities=15% Similarity=0.119 Sum_probs=49.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeccCCc-------ccchhhhhHHHHHhhcCC--Cc-eeeEeeeeeeCCeEEEE
Q 004689 414 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------QGKREFTNEVTLLSRIHH--RN-LVQFLGYCQEEGRSVLV 482 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-------~~~~~~~~E~~il~~l~H--pn-Iv~l~~~~~~~~~~~lV 482 (736)
+.||.|.++.||++... +++.++||....... .....+..|.++|+.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999764 468899998653211 123446789999988742 33 3455543 34456899
Q ss_pred EEecCCC
Q 004689 483 YEFMHNG 489 (736)
Q Consensus 483 ~e~~~~g 489 (736)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 409
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87 E-value=5.1e-05 Score=80.21 Aligned_cols=140 Identities=14% Similarity=0.202 Sum_probs=80.5
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCC--CceeeEee------eeeeCCeEEEEEEec
Q 004689 415 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH--RNLVQFLG------YCQEEGRSVLVYEFM 486 (736)
Q Consensus 415 ~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~H--pnIv~l~~------~~~~~~~~~lV~e~~ 486 (736)
.|+.|..+.||+....+ ..+++|+.... ...+..|+.+++.+.. -.+.+++. +....+..+++|+|+
T Consensus 39 ~l~gG~~n~~~~v~~~~-~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDS-GAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETT-EEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCC-CCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 45667789999998764 45899988642 2345566777766632 12333333 123466789999999
Q ss_pred CCCCHH--------------HHhhcccc----c-c-----cccCHHHH-------------------------------H
Q 004689 487 HNGTLK--------------EHLYGTLT----H-E-----QRINWIKR-------------------------------L 511 (736)
Q Consensus 487 ~~gsL~--------------~~l~~~~~----~-~-----~~l~~~~~-------------------------------~ 511 (736)
+|..+. ..+|.... . . ..-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11121100 0 0 00112110 0
Q ss_pred HHHHHHHHHHHHHHh----------CCCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 512 EIAEDAAKGIEYLHT----------GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 512 ~i~~qia~~L~~LH~----------~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
.+...+..++.+|+. .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666653 012489999999999999888899999999764
No 410
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.77 E-value=0.00012 Score=75.73 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=54.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCC---ceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
+.+|.|..+.||+.+..+|+.|++|+-..........|..|++.|+.+.-. -+.+++++. ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 468999999999999999999999987655444455688999999988421 234455432 2378999998764
Q ss_pred H
Q 004689 491 L 491 (736)
Q Consensus 491 L 491 (736)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 411
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.76 E-value=6.7e-07 Score=102.54 Aligned_cols=65 Identities=20% Similarity=0.092 Sum_probs=29.6
Q ss_pred ccccccccccccccc--ccCCCCC-CCC-CCCCCcEEEcCCCCCCC-CCCccccCccccceeecccccCc
Q 004689 243 LTKLSSLVELWLDGN--SLTGPIP-DFS-GCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQNNMLS 307 (736)
Q Consensus 243 ~~~l~~L~~L~Ls~N--~l~~~~p-~~~-~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~ 307 (736)
+.++++|+.|+|++| .+++..+ .+. .+++|++|+|++|.+++ .++..+..+++|+.|+|++|.++
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 344555555555422 2333222 222 24555555555555543 23333444555555555555554
No 412
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.71 E-value=0.00018 Score=75.23 Aligned_cols=138 Identities=20% Similarity=0.217 Sum_probs=91.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcC---CCceeeEeeeeeeCCeEEEEEEecCCCC
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSVLVYEFMHNGT 490 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~~~~~lV~e~~~~gs 490 (736)
+.|+.|....+|+.... +..+++|+.... ....+..|++.|+.+. ...+.+++.++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 45889999999999864 778999986532 2456889999999884 3568888888888888999999999876
Q ss_pred HH--------H---Hhhcccc-c-----------------ccccCHHHHH---HHHH----------------HHHHH-H
Q 004689 491 LK--------E---HLYGTLT-H-----------------EQRINWIKRL---EIAE----------------DAAKG-I 521 (736)
Q Consensus 491 L~--------~---~l~~~~~-~-----------------~~~l~~~~~~---~i~~----------------qia~~-L 521 (736)
+. . .||.... . ...-+|.... ++.. .+... .
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 42 1 1222111 0 0011343221 1111 11111 2
Q ss_pred HHHHh-CCCCceecCCCCCCCEEEcCCCcEEEEeec
Q 004689 522 EYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFG 556 (736)
Q Consensus 522 ~~LH~-~~~~~iiHrDikp~NILl~~~~~~kl~DFG 556 (736)
..|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23421 2246899999999999999887 8898974
No 413
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.65 E-value=9.3e-05 Score=81.02 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=47.9
Q ss_pred CceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcceecccccccccCccccccCc---CCCcchhHHHHHHHHHHH
Q 004689 530 PAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELI 606 (736)
Q Consensus 530 ~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~DVwSlGvvl~ell 606 (736)
..++|+|+++.|||++.++ ++|+||+.+..-............-...|++|+...... -....++......+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999876 999999988643211110000000123466666553211 112345567888888877
Q ss_pred hCC
Q 004689 607 SGQ 609 (736)
Q Consensus 607 tG~ 609 (736)
++.
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 663
No 414
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=5.5e-05 Score=79.85 Aligned_cols=15 Identities=7% Similarity=0.100 Sum_probs=12.5
Q ss_pred ccceeEEEeeccCCC
Q 004689 146 LPFVLSFKFGKTYDS 160 (736)
Q Consensus 146 l~~l~~l~l~~~~~s 160 (736)
++.+..|+|+.|.++
T Consensus 48 l~~L~~LdLs~n~i~ 62 (329)
T 3sb4_A 48 FPSLKVLDISNAEIK 62 (329)
T ss_dssp CTTCCEEEEEEEEEC
T ss_pred hccCeEEecCcceeE
Confidence 567888999998887
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.57 E-value=7.4e-06 Score=79.01 Aligned_cols=84 Identities=11% Similarity=0.144 Sum_probs=53.7
Q ss_pred ceEEEEccCCCCCcc----CCcccccccccccccccccccCCC----C-CCCCCCCCCcEEEc--CCCCCCCC----CCc
Q 004689 224 SITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGP----I-PDFSGCPDLRIIHL--EDNQLTGP----LPS 288 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~-p~~~~l~~L~~L~L--s~N~l~g~----~p~ 288 (736)
+|+.|+|++|+|+.. +...+...+.|++|+|++|.|+.. + ..+...++|++|+| ++|.|... +..
T Consensus 66 ~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~ 145 (185)
T 1io0_A 66 YVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIAN 145 (185)
T ss_dssp SCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHH
T ss_pred CcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHH
Confidence 577777777777642 333444556777777777777653 1 24566677777777 66777632 233
Q ss_pred cccCccccceeecccccCc
Q 004689 289 SLMNLPNLRELYVQNNMLS 307 (736)
Q Consensus 289 ~~~~l~~L~~L~l~~N~l~ 307 (736)
.+...++|+.|+|++|.+.
T Consensus 146 ~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 146 MLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCcCEEeccCCCCC
Confidence 4445567777777777764
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.44 E-value=2.9e-05 Score=83.12 Aligned_cols=104 Identities=18% Similarity=0.311 Sum_probs=66.7
Q ss_pred CceEEEEccCCCCCccCCcccc--cccccccccccc--cccCCC--C----CCC--CCCCCCcEEEcCCCCCCCCCCccc
Q 004689 223 PSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDG--NSLTGP--I----PDF--SGCPDLRIIHLEDNQLTGPLPSSL 290 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~--~l~~L~~L~Ls~--N~l~~~--~----p~~--~~l~~L~~L~Ls~N~l~g~~p~~~ 290 (736)
++|+.|+|..++++......+. .+++|+.|+|+. |...|. + +.+ ..+++|++|+|.+|.+.+..+..+
T Consensus 193 ~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 5788899988887754444454 688888888863 222221 1 222 347889999999888875433333
Q ss_pred c---CccccceeecccccCcCC----CCccc--ccccccccccCC
Q 004689 291 M---NLPNLRELYVQNNMLSGT----VPSSL--LSKNVVLNYAGN 326 (736)
Q Consensus 291 ~---~l~~L~~L~l~~N~l~g~----~P~~~--~~~~~~l~~~~n 326 (736)
. .+++|+.|+|+.|.|++. ++..+ +..+..+.+..|
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 3 578899999999988753 23222 234455666655
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.40 E-value=1.2e-05 Score=77.44 Aligned_cols=86 Identities=20% Similarity=0.306 Sum_probs=68.9
Q ss_pred CceEEEEccCC-CCCcc----CCcccccccccccccccccccCCCC----C-CCCCCCCCcEEEcCCCCCCCC----CCc
Q 004689 223 PSITVIHLSSK-NLTGN----IPSDLTKLSSLVELWLDGNSLTGPI----P-DFSGCPDLRIIHLEDNQLTGP----LPS 288 (736)
Q Consensus 223 ~~l~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p-~~~~l~~L~~L~Ls~N~l~g~----~p~ 288 (736)
++|+.|+|++| .++.. +...+...++|++|+|++|.|...- . .+...++|++|+|++|.|... +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 58999999999 88743 4445666789999999999997532 1 355678999999999999843 456
Q ss_pred cccCccccceeec--ccccCcC
Q 004689 289 SLMNLPNLRELYV--QNNMLSG 308 (736)
Q Consensus 289 ~~~~l~~L~~L~l--~~N~l~g 308 (736)
.+...+.|+.|+| ++|.++.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHhCCCceEEEecCCCCCCCH
Confidence 7788889999999 8899874
No 418
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.37 E-value=0.00011 Score=84.08 Aligned_cols=87 Identities=10% Similarity=0.010 Sum_probs=62.1
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccC---CCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccce
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT---GPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 298 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~---~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 298 (736)
++|+.|+|++|.+.+ +|..+.++++|+.|+++++... +..+ .+..+++|+.|+++++.. +.+|..+..+++|+.
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRK 297 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCE
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcE
Confidence 578888888888875 6777778888888888753332 1122 467778888888887643 367777888888888
Q ss_pred eecccccCcCCCC
Q 004689 299 LYVQNNMLSGTVP 311 (736)
Q Consensus 299 L~l~~N~l~g~~P 311 (736)
|+|++|.+++...
T Consensus 298 L~Ls~~~l~~~~~ 310 (592)
T 3ogk_B 298 LDLLYALLETEDH 310 (592)
T ss_dssp EEETTCCCCHHHH
T ss_pred EecCCCcCCHHHH
Confidence 8888888764443
No 419
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.29 E-value=0.0015 Score=68.67 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=74.9
Q ss_pred cccccCceE-EEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCC--ceeeEeeeeeeCCeEEEEEEecCCCCH
Q 004689 415 KIGSGGFGV-VYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR--NLVQFLGYCQEEGRSVLVYEFMHNGTL 491 (736)
Q Consensus 415 ~IG~G~fG~-Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~~~~~~~~~~~lV~e~~~~gsL 491 (736)
.|+.|+... +|+....+++.+++|...... ...+..|+.+++.+... .+.+++.+..+.+ +++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 455555444 667765446778787643221 14567788888887432 3456666644333 789999987666
Q ss_pred HHHhhcccc---------------------c-ccccCHHHHH--------------------HHHHHHHHHHHHHH---h
Q 004689 492 KEHLYGTLT---------------------H-EQRINWIKRL--------------------EIAEDAAKGIEYLH---T 526 (736)
Q Consensus 492 ~~~l~~~~~---------------------~-~~~l~~~~~~--------------------~i~~qia~~L~~LH---~ 526 (736)
.+.+..... . ...+...... .....+...+..+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 544321100 0 0011110000 00011122222221 1
Q ss_pred CCCCceecCCCCCCCEEEcCC----CcEEEEeecCCcc
Q 004689 527 GCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKF 560 (736)
Q Consensus 527 ~~~~~iiHrDikp~NILl~~~----~~~kl~DFGla~~ 560 (736)
.....++|||+.+.|||++.+ +.+.|+||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123489999999999999875 6899999998764
No 420
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.19 E-value=0.00097 Score=69.77 Aligned_cols=143 Identities=15% Similarity=0.189 Sum_probs=81.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCc--eeeEeee------eeeCCeEEEEEEe
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGY------CQEEGRSVLVYEF 485 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~~~------~~~~~~~~lV~e~ 485 (736)
+.|+.|....+|+....++ .+++|+.... .....+..|+.+++.+.... +.+++.. ....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3466788889999987655 6889987642 23456778888888874322 2333321 1234567899999
Q ss_pred cCCCCHHH--------------Hhhccc---ccc-----cccCHHHHHH------------HHHHHHHHHHHHHhC----
Q 004689 486 MHNGTLKE--------------HLYGTL---THE-----QRINWIKRLE------------IAEDAAKGIEYLHTG---- 527 (736)
Q Consensus 486 ~~~gsL~~--------------~l~~~~---~~~-----~~l~~~~~~~------------i~~qia~~L~~LH~~---- 527 (736)
++|..+.. .+|... ... ....|...+. +...+...+++++..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865311 112110 000 0011222110 011234455555532
Q ss_pred CCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 528 CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 528 ~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
...+++|+|+++.|||++.+..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12479999999999999987666899998764
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.08 E-value=4.6e-05 Score=72.23 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=65.2
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccc-cCCC-CCCCCCC----CCCcEEEcCCCC-CCCCCCccccCccc
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNS-LTGP-IPDFSGC----PDLRIIHLEDNQ-LTGPLPSSLMNLPN 295 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~-~p~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 295 (736)
.+|+.|||+++.++..--..+..+++|+.|+|+++. ++.. +..++.+ ++|++|+|+++. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999886655667899999999999985 6652 2245553 479999999974 77433346788999
Q ss_pred cceeeccccc
Q 004689 296 LRELYVQNNM 305 (736)
Q Consensus 296 L~~L~l~~N~ 305 (736)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999986
No 422
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.04 E-value=0.002 Score=66.80 Aligned_cols=70 Identities=11% Similarity=0.148 Sum_probs=44.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCce-eeEeeeeeeCCeEEEEEEec-CCCCH
Q 004689 414 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYEFM-HNGTL 491 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~~~~~~~~~~~lV~e~~-~~gsL 491 (736)
+.|+.|....+|+. +.+++|+..... ........|+.+++.+...++ .++++++ .+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~-~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGT-EEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCc-cceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence 56888999999998 568889875432 112334678888888753333 4555544 33346899999 55444
No 423
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.02 E-value=3.7e-05 Score=87.93 Aligned_cols=105 Identities=15% Similarity=0.100 Sum_probs=76.3
Q ss_pred CCceEEEEcc--C----CCCCccCC------cccccccccccccccccccCCCCC-CCCC-CCCCcEEEcCCCCCCCCCC
Q 004689 222 QPSITVIHLS--S----KNLTGNIP------SDLTKLSSLVELWLDGNSLTGPIP-DFSG-CPDLRIIHLEDNQLTGPLP 287 (736)
Q Consensus 222 ~~~l~~L~L~--~----n~l~g~~p------~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~-l~~L~~L~Ls~N~l~g~~p 287 (736)
.++|+.|+|+ + +++++ .| .-+..+++|+.|+|++ .+++... .+.. +++|+.|+|++|.+++..+
T Consensus 396 ~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 396 RPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp CTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred CCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 6899999999 4 56662 22 2256789999999977 6665433 5555 8999999999999986555
Q ss_pred ccc-cCccccceeecccccCcCCCCcccc---cccccccccCCcc
Q 004689 288 SSL-MNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNIN 328 (736)
Q Consensus 288 ~~~-~~l~~L~~L~l~~N~l~g~~P~~~~---~~~~~l~~~~n~~ 328 (736)
..+ ..+++|+.|+|++|.+++..+..+. ..+..+.+.+|+.
T Consensus 474 ~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 474 HHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 555 6789999999999999654444332 3456677777744
No 424
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.02 E-value=7.2e-05 Score=85.46 Aligned_cols=83 Identities=13% Similarity=0.185 Sum_probs=52.8
Q ss_pred CceEEEEccCCCCCccCCcccc-ccccccccccccc-ccCCC-CCCC-CCCCCCcEEEcCCCCCCCCCCcccc----Ccc
Q 004689 223 PSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGN-SLTGP-IPDF-SGCPDLRIIHLEDNQLTGPLPSSLM----NLP 294 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~-~~l~~L~~L~Ls~N~l~g~~p~~~~----~l~ 294 (736)
++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++.+ .+|++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4677777777777766666665 5677777777777 44432 3333 3577777777777776655444333 455
Q ss_pred ccceeeccccc
Q 004689 295 NLRELYVQNNM 305 (736)
Q Consensus 295 ~L~~L~l~~N~ 305 (736)
+|+.|++++|.
T Consensus 185 ~L~~L~l~~~~ 195 (594)
T 2p1m_B 185 SLVSLNISCLA 195 (594)
T ss_dssp CCCEEECTTCC
T ss_pred cCcEEEecccC
Confidence 77777777775
No 425
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.96 E-value=0.0018 Score=70.89 Aligned_cols=72 Identities=14% Similarity=0.316 Sum_probs=49.4
Q ss_pred ccccccCceEEEEEEECC--------CcEEEEEEeccCCcccchhhhhHHHHHhhcCCCce-eeEeeeeeeCCeEEEEEE
Q 004689 414 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~--------~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~~~~~~~~~~~lV~e 484 (736)
+.|+.|....+|+....+ ++.+++|+.... .....+..|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 457888889999998753 578999987431 111456689999998853333 566766543 28999
Q ss_pred ecCCCCH
Q 004689 485 FMHNGTL 491 (736)
Q Consensus 485 ~~~~gsL 491 (736)
|++|.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 426
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.84 E-value=0.009 Score=62.44 Aligned_cols=141 Identities=13% Similarity=0.133 Sum_probs=81.2
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCCCc--eeeEeee-----eeeCCeEEEEEEecC
Q 004689 415 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGY-----CQEEGRSVLVYEFMH 487 (736)
Q Consensus 415 ~IG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~~~-----~~~~~~~~lV~e~~~ 487 (736)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +.+++.. ....+..+++|++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 77789999887777789999986332 23456778888888884222 3444443 123456688999998
Q ss_pred CCCHH-----H------H---hhcccc-----cccccCHHHH----HHH---------------HHHHHHHHHHHHhC--
Q 004689 488 NGTLK-----E------H---LYGTLT-----HEQRINWIKR----LEI---------------AEDAAKGIEYLHTG-- 527 (736)
Q Consensus 488 ~gsL~-----~------~---l~~~~~-----~~~~l~~~~~----~~i---------------~~qia~~L~~LH~~-- 527 (736)
|..+. . . +|.... ....+++... ..+ ...+...++.+...
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75432 0 0 111100 0111121110 000 11111223333221
Q ss_pred --CCCceecCCCCCCCEEEcCCCcEEEEeecCCc
Q 004689 528 --CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 559 (736)
Q Consensus 528 --~~~~iiHrDikp~NILl~~~~~~kl~DFGla~ 559 (736)
....++|+|+++.|||++ + .+.|+||+.+.
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 234789999999999999 4 89999998765
No 427
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.83 E-value=0.006 Score=67.17 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=48.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeccCCcccchhhhhHHHHHhhcCCCce-eeEeeeeeeCCeEEEEEEecCCCCH
Q 004689 414 KKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYEFMHNGTL 491 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~~~~~~~~~~~lV~e~~~~gsL 491 (736)
+.|+.|-...+|+....+ +..+++|+..... ...-+...|..+++.+...++ .++++++. + .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 467888889999998874 4788999864321 112223689999999965444 46777663 2 259999987544
No 428
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.82 E-value=0.0033 Score=67.39 Aligned_cols=141 Identities=16% Similarity=0.198 Sum_probs=80.3
Q ss_pred ccccccCceEEEEEEEC--------CCcEEEEEEeccCCcccchhhhhHHHHHhhcC-CCceeeEeeeeeeCCeEEEEEE
Q 004689 414 KKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV~e 484 (736)
+.|..|-...+|+.... +++.+++|+... .......+.+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 35667778889998874 247899998532 2223455678999998884 3223566666654 28999
Q ss_pred ecCCCCHHHH-----------------hhccc-cccccc--CHHHHHHHHHHHH-------------------HHHHH--
Q 004689 485 FMHNGTLKEH-----------------LYGTL-THEQRI--NWIKRLEIAEDAA-------------------KGIEY-- 523 (736)
Q Consensus 485 ~~~~gsL~~~-----------------l~~~~-~~~~~l--~~~~~~~i~~qia-------------------~~L~~-- 523 (736)
|++|..|... ||... ...... -+.+..++..++. ..+..
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998654311 11110 001111 1233333332221 12233
Q ss_pred --HHhC-CCCceecCCCCCCCEEEcCC----CcEEEEeecCCc
Q 004689 524 --LHTG-CVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSK 559 (736)
Q Consensus 524 --LH~~-~~~~iiHrDikp~NILl~~~----~~~kl~DFGla~ 559 (736)
|... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 3221 22478999999999999876 789999998774
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.67 E-value=0.0018 Score=58.22 Aligned_cols=55 Identities=31% Similarity=0.489 Sum_probs=32.6
Q ss_pred EEEccCCCCC-ccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCC
Q 004689 227 VIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLT 283 (736)
Q Consensus 227 ~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~ 283 (736)
.++.++++|+ ..+|..|. ++|+.|+|++|+|+...+ .|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6777777776 34665443 246666666666665555 3555666666666666553
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.61 E-value=0.0023 Score=57.56 Aligned_cols=54 Identities=28% Similarity=0.224 Sum_probs=37.0
Q ss_pred cccccccccC--CCCCCCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecccccC
Q 004689 251 ELWLDGNSLT--GPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 306 (736)
Q Consensus 251 ~L~Ls~N~l~--~~~p~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 306 (736)
.++.++++|+ ..+..+. .+|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 6788888887 4333332 3578888888888855555677777787776666654
No 431
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.61 E-value=0.00023 Score=76.09 Aligned_cols=84 Identities=19% Similarity=0.221 Sum_probs=41.1
Q ss_pred CCceEEEEccCCC-CCccCCcccccccccccccccccccCCCCC-CC--CCCCCCcEEEcCC--CCCCCC-----CCccc
Q 004689 222 QPSITVIHLSSKN-LTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DF--SGCPDLRIIHLED--NQLTGP-----LPSSL 290 (736)
Q Consensus 222 ~~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~--~~l~~L~~L~Ls~--N~l~g~-----~p~~~ 290 (736)
+|+|+.|+|++|. +. ++. + .+++|+.|+|..|.++...- .+ ..+++|+.|+|+. |...|. +-..+
T Consensus 171 ~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp CTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 3566666666652 22 333 3 25666666666665543221 22 2566666666642 221111 00111
Q ss_pred --cCccccceeecccccCcCC
Q 004689 291 --MNLPNLRELYVQNNMLSGT 309 (736)
Q Consensus 291 --~~l~~L~~L~l~~N~l~g~ 309 (736)
..+++|+.|+|.+|.+++.
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~ 267 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNV 267 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHH
T ss_pred hcCCCCCcCEEeCCCCCCchH
Confidence 2356666666666666543
No 432
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.52 E-value=0.0057 Score=65.30 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=44.8
Q ss_pred ccccccCceEEEEEEECC---------CcEEEEEEeccCCcccchhhhhHHHHHhhcCCCc-eeeEeeeeeeCCeEEEEE
Q 004689 414 KKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN-LVQFLGYCQEEGRSVLVY 483 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~---------~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~~~lV~ 483 (736)
+.|+.|....+|+....+ ++.+++|+..... ....+...|.++++.+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457788888999998763 2688899865321 11223468899998885334 34666544 2 26899
Q ss_pred EecCCCCH
Q 004689 484 EFMHNGTL 491 (736)
Q Consensus 484 e~~~~gsL 491 (736)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.51 E-value=0.01 Score=62.61 Aligned_cols=68 Identities=12% Similarity=0.193 Sum_probs=45.6
Q ss_pred cccCceEEEEEEECCCcEEEEEEeccCCcccchhhhhHHHHHhhcCC---CceeeEeee------eeeCCeEEEEEEecC
Q 004689 417 GSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH---RNLVQFLGY------CQEEGRSVLVYEFMH 487 (736)
Q Consensus 417 G~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~------~~~~~~~~lV~e~~~ 487 (736)
|.|....||+....+| .+++|+..... ...|+.+++.+.. |.+.+.+.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~------~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYH------DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSS------CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCcc------chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3344679999987766 99999875432 2567777777732 224455432 233567899999999
Q ss_pred CCCH
Q 004689 488 NGTL 491 (736)
Q Consensus 488 ~gsL 491 (736)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
No 434
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.32 E-value=0.0042 Score=67.32 Aligned_cols=59 Identities=17% Similarity=0.207 Sum_probs=25.1
Q ss_pred ccccccccccccccccccC-----CCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 242 DLTKLSSLVELWLDGNSLT-----GPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 242 ~~~~l~~L~~L~Ls~N~l~-----~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
.|.++++|+.|+|.+|.+. ...+ .|.+|++|+.++|. |.++..-..+|.+|++|+.|.|
T Consensus 266 aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~l 330 (401)
T 4fdw_A 266 AFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTI 330 (401)
T ss_dssp TTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEE
T ss_pred HhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEE
Confidence 4444444555544444443 1111 34444455555444 2233222234444445555544
No 435
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.07 E-value=0.0068 Score=65.64 Aligned_cols=89 Identities=15% Similarity=0.111 Sum_probs=70.0
Q ss_pred CCceEEEEccCCCCC-----ccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccc
Q 004689 222 QPSITVIHLSSKNLT-----GNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPN 295 (736)
Q Consensus 222 ~~~l~~L~L~~n~l~-----g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 295 (736)
.++|+.|+|.+|.+. ..-+..|.++++|+.|+|. |+++.... .|.+|++|+.|+|..| ++..-+.+|.++ +
T Consensus 270 c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~ 346 (401)
T 4fdw_A 270 CPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-G 346 (401)
T ss_dssp CTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-C
T ss_pred CCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-C
Confidence 368999999888765 2334578899999999999 55776555 7999999999999665 664556689999 9
Q ss_pred cceeecccccCcCCCCccc
Q 004689 296 LRELYVQNNMLSGTVPSSL 314 (736)
Q Consensus 296 L~~L~l~~N~l~g~~P~~~ 314 (736)
|+.|++++|.+. .++...
T Consensus 347 L~~l~l~~n~~~-~l~~~~ 364 (401)
T 4fdw_A 347 IKEVKVEGTTPP-QVFEKV 364 (401)
T ss_dssp CCEEEECCSSCC-BCCCSS
T ss_pred CCEEEEcCCCCc-cccccc
Confidence 999999999887 454433
No 436
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.54 E-value=0.05 Score=58.54 Aligned_cols=141 Identities=13% Similarity=0.187 Sum_probs=79.0
Q ss_pred cccccCceEEEEEEECC--------CcEEEEEEeccCCcc------------c------chhhhhHHHHHhhcC-CCcee
Q 004689 415 KIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQ------------G------KREFTNEVTLLSRIH-HRNLV 467 (736)
Q Consensus 415 ~IG~G~fG~Vy~~~~~~--------~~~vAvK~l~~~~~~------------~------~~~~~~E~~il~~l~-HpnIv 467 (736)
.|..|-...+|+....+ ...|.+++.-..... . ......|..+++.+. +.-..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45557778899988753 367888886432110 0 112234888888885 33345
Q ss_pred eEeeeeeeCCeEEEEEEecCCCCHHHH-----------------hhcc-cccccccC--HHHHHHHHHHHH---------
Q 004689 468 QFLGYCQEEGRSVLVYEFMHNGTLKEH-----------------LYGT-LTHEQRIN--WIKRLEIAEDAA--------- 518 (736)
Q Consensus 468 ~l~~~~~~~~~~~lV~e~~~~gsL~~~-----------------l~~~-~~~~~~l~--~~~~~~i~~qia--------- 518 (736)
++++++... +|+||+++-+|... +|.. ........ +....++..++.
T Consensus 139 kl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 677766432 89999987544211 1111 00011111 112222222211
Q ss_pred -------------HHH----HHHHhC-CCCceecCCCCCCCEEEcCC------CcEEEEeecCCc
Q 004689 519 -------------KGI----EYLHTG-CVPAIIHRDLKSSNILLDKH------MRAKVSDFGLSK 559 (736)
Q Consensus 519 -------------~~L----~~LH~~-~~~~iiHrDikp~NILl~~~------~~~kl~DFGla~ 559 (736)
.-+ .+|... ....++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 22478999999999999887 789999998764
No 437
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.54 E-value=0.15 Score=55.20 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=48.5
Q ss_pred ccccccCceEEEEEEECC--------CcEEEEEEeccCCcccchhhhhHHHHHhhcCCCc-eeeEeeeeeeCCeEEEEEE
Q 004689 414 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN-LVQFLGYCQEEGRSVLVYE 484 (736)
Q Consensus 414 ~~IG~G~fG~Vy~~~~~~--------~~~vAvK~l~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~~~lV~e 484 (736)
+.+..|-...+|+....+ ++.+++|+.... ....-+..+|..+++.+...+ ..++++.+. -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-VGKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-C-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-cchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 456778888999998763 578999985432 222334568999998885323 345555332 268999
Q ss_pred ecCCCCH
Q 004689 485 FMHNGTL 491 (736)
Q Consensus 485 ~~~~gsL 491 (736)
|++|..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.22 E-value=0.0051 Score=59.26 Aligned_cols=83 Identities=14% Similarity=0.261 Sum_probs=59.0
Q ss_pred CceEEEEccCC-CCCc----cCCcccccccccccccccccccCCCCC-C----CCCCCCCcEEEcCCCCCCCC----CCc
Q 004689 223 PSITVIHLSSK-NLTG----NIPSDLTKLSSLVELWLDGNSLTGPIP-D----FSGCPDLRIIHLEDNQLTGP----LPS 288 (736)
Q Consensus 223 ~~l~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~----~~~l~~L~~L~Ls~N~l~g~----~p~ 288 (736)
+.|+.|+|++| +|.. .+...+..-+.|+.|+|++|+|...-- . +..-+.|+.|+|+.|.|... +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 36889999985 7753 244556667889999999999985321 2 44457899999999999832 223
Q ss_pred cccCccccceeeccccc
Q 004689 289 SLMNLPNLRELYVQNNM 305 (736)
Q Consensus 289 ~~~~l~~L~~L~l~~N~ 305 (736)
.+..-+.|+.|+|++|.
T Consensus 121 aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQR 137 (197)
T ss_dssp HTTTTCCCSEEECCCCS
T ss_pred HHhhCCceeEEECCCCc
Confidence 45555679999998653
No 439
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=93.96 E-value=0.011 Score=55.83 Aligned_cols=69 Identities=10% Similarity=0.115 Sum_probs=50.6
Q ss_pred CCcccccccccccccccccccCCC-CCCCCCCCCCcEEEcCCCC-CCCCCCccccCc----cccceeeccccc-Cc
Q 004689 239 IPSDLTKLSSLVELWLDGNSLTGP-IPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL----PNLRELYVQNNM-LS 307 (736)
Q Consensus 239 ~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~ 307 (736)
+|.....--+|+.|||+++.++.. +..+.+|++|+.|+|+++. |+..--..++.+ ++|+.|+|++|. +|
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 454333334799999999998763 3467899999999999995 764333345554 479999999985 66
No 440
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=93.82 E-value=0.34 Score=47.01 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=64.0
Q ss_pred CCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeecCCccccCCCCcc
Q 004689 489 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 568 (736)
Q Consensus 489 gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 568 (736)
-+|.+.|... +..+++.++|.++.|.+.+|.-+-.+.. . ..+=+-|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 3788888533 5679999999999999999877622110 1 1223346899999999888753 1110
Q ss_pred eecccccccccCccccccCcCCCcchhHHHHHHHHHHHhC
Q 004689 569 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISG 608 (736)
Q Consensus 569 ~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG 608 (736)
.....+.+||... ...+.+.=|||+|+++|.-+-=
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 1123456888763 3456788999999999998863
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=92.44 E-value=0.12 Score=55.51 Aligned_cols=79 Identities=19% Similarity=0.168 Sum_probs=41.2
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
.+|+.+.+.++ ++..-...|.++++|+.++|..+ ++..-. +|.+|++|+.++|..| ++..-..+|.+|++|+.+++
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 34555555433 43222234556666666666533 443333 4666666666666555 44222345666666666666
Q ss_pred ccc
Q 004689 302 QNN 304 (736)
Q Consensus 302 ~~N 304 (736)
..+
T Consensus 374 p~~ 376 (394)
T 4fs7_A 374 PKR 376 (394)
T ss_dssp EGG
T ss_pred CCC
Confidence 433
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=91.89 E-value=0.031 Score=53.76 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=58.6
Q ss_pred ceEEEEccCCCCCccCCccc----ccccccccccccccccCCCCC-----CCCCCCCCcEEEcCCCCC---CC----CCC
Q 004689 224 SITVIHLSSKNLTGNIPSDL----TKLSSLVELWLDGNSLTGPIP-----DFSGCPDLRIIHLEDNQL---TG----PLP 287 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~----~~l~~L~~L~Ls~N~l~~~~p-----~~~~l~~L~~L~Ls~N~l---~g----~~p 287 (736)
.|+.|+|++|+|...-...| ..-+.|++|+|+.|.|...-- .+..-+.|++|+|++|.. .. .+-
T Consensus 71 ~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia 150 (197)
T 1pgv_A 71 HIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMM 150 (197)
T ss_dssp CCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHH
T ss_pred CcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHH
Confidence 68999999999985433334 456889999999999986321 355567799999997643 21 122
Q ss_pred ccccCccccceeecccccC
Q 004689 288 SSLMNLPNLRELYVQNNML 306 (736)
Q Consensus 288 ~~~~~l~~L~~L~l~~N~l 306 (736)
..+..-+.|+.|+++.|.+
T Consensus 151 ~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 151 MAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHCSSCCEEECCCCCH
T ss_pred HHHHhCCCcCeEeccCCCc
Confidence 3444556788888877754
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=91.66 E-value=0.2 Score=53.24 Aligned_cols=77 Identities=16% Similarity=0.202 Sum_probs=34.5
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
.|+.+.+..+ ++..-...+.++.+|+.+.+..+ +..... .|.+|++|+.+.|.+|.++..-..+|.++.+|+.+.|.
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcC
Confidence 4555555443 33122223444555555555332 322222 34555555555555555542223345555555555554
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=90.93 E-value=0.28 Score=52.43 Aligned_cols=99 Identities=15% Similarity=0.322 Sum_probs=56.4
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeec
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 301 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 301 (736)
..|+.+.+.++-.+ .-...+.++++|+.+.+. +.++.... .|.+|.+|+.++|..| ++..-..+|.+|++|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 45667777655433 233355667777777775 34444333 5777777777777654 44222346777777777777
Q ss_pred ccccCcCCCCccccc---ccccccccCC
Q 004689 302 QNNMLSGTVPSSLLS---KNVVLNYAGN 326 (736)
Q Consensus 302 ~~N~l~g~~P~~~~~---~~~~l~~~~n 326 (736)
..+ ++ .|+...|. .+..+.+.++
T Consensus 342 p~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 342 PSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred Ccc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 543 55 55554442 2344455554
No 445
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=90.05 E-value=0.51 Score=50.43 Aligned_cols=78 Identities=21% Similarity=0.251 Sum_probs=35.3
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
.|+.+.+. ++++..-...|.++++|+.++|..| ++..-. +|.+|++|+.+.|..+ ++..-..+|.+|++|+.+++.
T Consensus 289 ~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~ 365 (394)
T 4gt6_A 289 ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYS 365 (394)
T ss_dssp TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEES
T ss_pred ccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEEC
Confidence 45555553 2333112224445555555555433 332222 4555555555555433 331222355555555555555
Q ss_pred cc
Q 004689 303 NN 304 (736)
Q Consensus 303 ~N 304 (736)
+|
T Consensus 366 ~~ 367 (394)
T 4gt6_A 366 GS 367 (394)
T ss_dssp SC
T ss_pred Cc
Confidence 44
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=88.81 E-value=0.52 Score=49.91 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=39.1
Q ss_pred ceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeecc
Q 004689 224 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 302 (736)
Q Consensus 224 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 302 (736)
+|+.+.+..+ ++..-...|.++++|+.+.|.++.++.... .|.+|.+|+.+.|..+ ++..-..+|.+|++|+.+.+.
T Consensus 264 ~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 264 ALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred hhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 4555555432 331222244556666666666655554443 4666666666666543 331222355566666666554
No 447
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=86.20 E-value=0.42 Score=51.08 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=56.1
Q ss_pred CceEEEEccCCCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCCCCCCCCccccCcccccee
Q 004689 223 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 299 (736)
Q Consensus 223 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 299 (736)
.+|+.++|.++ ++-.-...|.++++|+.+.|..| ++..-. +|.+|++|+.++|..| ++ .+...|.++++|+.+
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 57999999754 66333457889999999999877 665444 7999999999999865 33 345678888888865
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.47 E-value=3.7 Score=39.57 Aligned_cols=116 Identities=9% Similarity=0.113 Sum_probs=78.3
Q ss_pred CCCceeeEeeeeeeCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCC
Q 004689 462 HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 541 (736)
Q Consensus 462 ~HpnIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iiHrDikp~N 541 (736)
.||+.+.. .+-.+++...+.|+.-.. ...+ ..-..++...+++++.+++....+++.. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f-----~~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPF-----DNIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEG-----GGGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCH-----HHHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888866 455566666665554332 2222 1234577888999999999988777665 788899999
Q ss_pred EEEcCCCcEEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCc
Q 004689 542 ILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 613 (736)
Q Consensus 542 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~ 613 (736)
++++.++.+++.-.|+.... +|.- .++..=.-.+=|++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877764321 2221 1112223356688889999988875
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.88 E-value=0.18 Score=55.36 Aligned_cols=59 Identities=5% Similarity=0.022 Sum_probs=17.3
Q ss_pred hccccccCceEEEEEEECC-CcEEEE------EEeccCC--cccchhhhhHHHHHhhcCCCceeeEeeeee
Q 004689 413 EKKIGSGGFGVVYYGKLKD-GKEIAV------KVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ 474 (736)
Q Consensus 413 ~~~IG~G~fG~Vy~~~~~~-~~~vAv------K~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 474 (736)
.+.|| ||+||+|.+.. ..+||| |..+... .+....+.+|..+++.++|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45676 99999998864 367888 7665432 222346788999999999999999988654
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=75.57 E-value=4.7 Score=38.97 Aligned_cols=115 Identities=10% Similarity=0.115 Sum_probs=75.6
Q ss_pred CCCceeeEeeeeeeCCeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHHHHHHH-HHHhCCCCceecCCCCCC
Q 004689 462 HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIE-YLHTGCVPAIIHRDLKSS 540 (736)
Q Consensus 462 ~HpnIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qia~~L~-~LH~~~~~~iiHrDikp~ 540 (736)
.||.. -..+-.+++...+.++.-+++.=...+ ..++...+++++.+++.... +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67877 344446667777777654333222222 44677888999999888776 56554 78889999
Q ss_pred CEEEcCCCcEEEEeecCCccccCCCCcceecccccccccCccccccCcCCCcchhHHHHHHHHHHHhCCCcCc
Q 004689 541 NILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 613 (736)
Q Consensus 541 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DVwSlGvvl~elltG~~p~~ 613 (736)
|++++.++.+++.-.|+-.. ++|.-+ ++.-=.-.+=|++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKES------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTT------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCccc------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999987775322 233221 111123356678888888887764
No 451
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=65.10 E-value=2.1 Score=24.78 Aligned_cols=15 Identities=33% Similarity=0.864 Sum_probs=13.5
Q ss_pred cccCCCCCCCccccc
Q 004689 13 NCRYPDDPFDRIWES 27 (736)
Q Consensus 13 ~~ryp~D~~dR~W~~ 27 (736)
..|-|+|.|.-||+-
T Consensus 7 llrnpndkyepfwed 21 (26)
T 1nrp_R 7 LLRNPNDKYEPFWED 21 (26)
T ss_pred hhcCCCcccCccccc
Confidence 579999999999986
No 452
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=62.55 E-value=2.6 Score=24.67 Aligned_cols=15 Identities=33% Similarity=0.864 Sum_probs=13.5
Q ss_pred cccCCCCCCCccccc
Q 004689 13 NCRYPDDPFDRIWES 27 (736)
Q Consensus 13 ~~ryp~D~~dR~W~~ 27 (736)
.+|-|+|.|.-||+-
T Consensus 7 llrnpndkyepfwed 21 (27)
T 1nro_R 7 LLRNPNDKYEPFWED 21 (27)
T ss_pred cccCCCcccCccccc
Confidence 479999999999986
No 453
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=57.24 E-value=5 Score=42.75 Aligned_cols=29 Identities=31% Similarity=0.484 Sum_probs=24.6
Q ss_pred ceecCCCCCCCEEE------cCCCcEEEEeecCCc
Q 004689 531 AIIHRDLKSSNILL------DKHMRAKVSDFGLSK 559 (736)
Q Consensus 531 ~iiHrDikp~NILl------~~~~~~kl~DFGla~ 559 (736)
.++|+|+.+.|||+ +++..++++||-.|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 46799999999999 446779999998875
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=50.93 E-value=1.5 Score=30.57 Aligned_cols=7 Identities=57% Similarity=0.881 Sum_probs=2.9
Q ss_pred EEeehhh
Q 004689 342 IIGSSVG 348 (736)
Q Consensus 342 ii~~~~~ 348 (736)
+++.+++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3344444
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.33 E-value=79 Score=26.03 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=21.7
Q ss_pred CCCCCCCCcEEEcCCCCCCCCCCccccCccccceeeccc
Q 004689 265 DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 303 (736)
Q Consensus 265 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 303 (736)
.|.+|++|+.+.|-.+ ++..-..+|.+|.+|+.+.+..
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 4666666666666554 2322334566666666666544
No 456
>2kdd_A Borealin; protein dimer, cell cycle, cell division, centromere, chromosomal protein, cytoplasm, mitosis, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=26.84 E-value=24 Score=26.89 Aligned_cols=15 Identities=20% Similarity=0.313 Sum_probs=0.0
Q ss_pred CCceEEEEEeCCCcC
Q 004689 104 DESRKFRLVLPGQPD 118 (736)
Q Consensus 104 ~~~R~F~i~~n~~~~ 118 (736)
.+.|+++|++||-+.
T Consensus 3 ~~ErvY~iSvNGSPL 17 (76)
T 2kdd_A 3 AGERIYNISGNGSPL 17 (76)
T ss_dssp ---------------
T ss_pred ccCceEEEeecCCcC
Confidence 356999999999765
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=26.74 E-value=6.5 Score=26.50 Aligned_cols=9 Identities=22% Similarity=0.338 Sum_probs=3.8
Q ss_pred EEeehhhHH
Q 004689 342 IIGSSVGAA 350 (736)
Q Consensus 342 ii~~~~~~~ 350 (736)
+.++++++.
T Consensus 13 IAGiVvG~v 21 (38)
T 2k1k_A 13 IVAVIFGLL 21 (38)
T ss_dssp HHHHHHHHH
T ss_pred eeeeehHHH
Confidence 334444443
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.17 E-value=1.5e+02 Score=24.34 Aligned_cols=48 Identities=21% Similarity=0.240 Sum_probs=34.9
Q ss_pred CCCCccCCcccccccccccccccccccCCCCC-CCCCCCCCcEEEcCCCC
Q 004689 233 KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQ 281 (736)
Q Consensus 233 n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~Ls~N~ 281 (736)
.+++..--..|.++++|+.+.|..+ ++.+-. +|.+|.+|+.+.|....
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 4455334457888999999999765 554444 79999999999987643
No 459
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=29.86 E-value=16 Score=24.44 Aligned_cols=6 Identities=33% Similarity=-0.047 Sum_probs=2.3
Q ss_pred ecCCCC
Q 004689 364 HKGKKN 369 (736)
Q Consensus 364 ~rrk~~ 369 (736)
.+++|.
T Consensus 31 ~w~qKP 36 (39)
T 2l6w_A 31 LWQKKP 36 (39)
Confidence 334443
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.63 E-value=3.2e+02 Score=27.90 Aligned_cols=78 Identities=12% Similarity=0.099 Sum_probs=43.1
Q ss_pred CeEEEEEEecCCCCHHHHhhcccccccccCHHHHHHHHHHH--HHHHHHHHhCCC-Ccee-cCCCCCCCEEEcCCCc-EE
Q 004689 477 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDA--AKGIEYLHTGCV-PAII-HRDLKSSNILLDKHMR-AK 551 (736)
Q Consensus 477 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi--a~~L~~LH~~~~-~~ii-HrDikp~NILl~~~~~-~k 551 (736)
+...++|+|.+|..|.+.-+.. ....+... .+.++ .-+++.+..+.. .+.+ +.--.++|||++.+.. +.
T Consensus 155 ~~~~l~meyv~G~~L~e~~~~~--~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~ 228 (342)
T 1cja_A 155 QANILLMELVRGITLNKLTTTS--APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVV 228 (342)
T ss_dssp CSEEEEEECCCEEESTTCCSSS--HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEE
T ss_pred ccceehhhhcCCCccccchhhh--hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEE
Confidence 3567999999976654432111 01112222 22222 234555555433 2222 2235899999987654 88
Q ss_pred EEeecCCcc
Q 004689 552 VSDFGLSKF 560 (736)
Q Consensus 552 l~DFGla~~ 560 (736)
++|-+++..
T Consensus 229 ~IDhn~af~ 237 (342)
T 1cja_A 229 PIDSKIIPL 237 (342)
T ss_dssp ECSCCCCCC
T ss_pred EEcCCcccc
Confidence 999988753
Done!