Query 004690
Match_columns 736
No_of_seqs 620 out of 4101
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 11:16:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004690.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004690hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1770 PtrB Protease II [Amin 100.0 2E-117 4E-122 936.3 69.8 651 50-727 4-681 (682)
2 PRK10115 protease 2; Provision 100.0 7E-101 1E-105 875.3 82.3 653 52-730 2-681 (686)
3 KOG2237 Predicted serine prote 100.0 1E-100 3E-105 799.4 49.4 662 49-730 3-711 (712)
4 COG1505 Serine proteases of th 100.0 4E-76 8.6E-81 613.9 47.0 610 69-726 2-648 (648)
5 PF02897 Peptidase_S9_N: Proly 100.0 2.4E-58 5.3E-63 506.0 48.5 396 52-472 1-413 (414)
6 COG1506 DAP2 Dipeptidyl aminop 100.0 2.7E-39 5.9E-44 367.9 48.2 507 193-727 62-619 (620)
7 PF00326 Peptidase_S9: Prolyl 100.0 3.3E-29 7.1E-34 249.1 15.1 192 532-727 1-212 (213)
8 KOG2281 Dipeptidyl aminopeptid 100.0 1.5E-26 3.2E-31 242.0 30.8 319 390-723 518-866 (867)
9 KOG2100 Dipeptidyl aminopeptid 100.0 1.1E-24 2.4E-29 249.8 47.5 329 386-728 398-751 (755)
10 PRK13604 luxD acyl transferase 99.8 3.2E-20 6.9E-25 187.7 18.1 201 487-706 10-248 (307)
11 PRK10566 esterase; Provisional 99.8 2.4E-19 5.3E-24 182.9 19.5 216 499-725 12-249 (249)
12 PLN02298 hydrolase, alpha/beta 99.8 3.9E-19 8.6E-24 189.2 20.8 239 480-731 26-324 (330)
13 COG0412 Dienelactone hydrolase 99.8 3.1E-18 6.8E-23 170.7 20.9 216 487-726 3-235 (236)
14 PRK05077 frsA fermentation/res 99.8 2E-18 4.3E-23 187.2 20.9 219 483-725 165-413 (414)
15 COG3458 Acetyl esterase (deace 99.8 1E-18 2.2E-23 166.8 15.9 231 478-726 48-319 (321)
16 PF01738 DLH: Dienelactone hyd 99.8 1.6E-18 3.4E-23 172.9 14.9 205 499-725 1-218 (218)
17 PRK10162 acetyl esterase; Prov 99.8 1.8E-17 3.9E-22 174.4 23.2 221 484-726 55-317 (318)
18 KOG1552 Predicted alpha/beta h 99.8 9.5E-18 2E-22 161.4 17.6 212 486-724 35-252 (258)
19 TIGR02821 fghA_ester_D S-formy 99.8 2.4E-17 5.1E-22 170.2 21.9 228 486-724 13-274 (275)
20 PLN02385 hydrolase; alpha/beta 99.8 2.3E-17 4.9E-22 176.9 22.2 230 483-726 58-347 (349)
21 TIGR01840 esterase_phb esteras 99.8 5.3E-18 1.1E-22 168.1 14.4 180 502-684 2-197 (212)
22 PF05448 AXE1: Acetyl xylan es 99.8 8.8E-18 1.9E-22 174.5 15.1 226 481-724 51-320 (320)
23 KOG1455 Lysophospholipase [Lip 99.8 4.4E-17 9.6E-22 159.7 18.3 228 485-724 26-312 (313)
24 PLN02442 S-formylglutathione h 99.8 6E-17 1.3E-21 167.5 20.5 212 485-703 17-263 (283)
25 PHA02857 monoglyceride lipase; 99.8 7.4E-17 1.6E-21 167.3 21.2 215 492-725 6-274 (276)
26 TIGR02800 propeller_TolB tol-p 99.7 6.7E-16 1.4E-20 170.2 27.3 276 93-408 118-397 (417)
27 PRK11460 putative hydrolase; P 99.7 1.4E-16 3.1E-21 159.6 17.8 186 514-726 14-210 (232)
28 PRK10749 lysophospholipase L2; 99.7 2.8E-16 6.1E-21 166.9 20.5 225 487-724 31-329 (330)
29 PRK04792 tolB translocation pr 99.7 1.6E-15 3.4E-20 167.1 26.3 203 193-408 220-425 (448)
30 PRK01029 tolB translocation pr 99.7 5.1E-15 1.1E-19 161.8 29.1 206 193-408 187-403 (428)
31 PRK04043 tolB translocation pr 99.7 3E-15 6.4E-20 162.4 26.0 204 193-408 190-400 (419)
32 KOG4391 Predicted alpha/beta h 99.7 3E-16 6.6E-21 144.5 13.6 222 483-728 51-286 (300)
33 COG1647 Esterase/lipase [Gener 99.7 1.7E-16 3.6E-21 147.9 11.8 190 516-722 15-242 (243)
34 PRK05137 tolB translocation pr 99.7 4.3E-15 9.3E-20 163.9 25.2 203 193-408 204-412 (435)
35 PRK05371 x-prolyl-dipeptidyl a 99.7 5.1E-15 1.1E-19 171.0 26.4 240 478-728 162-523 (767)
36 PRK04043 tolB translocation pr 99.7 1.9E-14 4.1E-19 156.2 29.1 240 203-466 155-403 (419)
37 COG0657 Aes Esterase/lipase [L 99.7 1.4E-15 3E-20 160.4 19.6 212 492-723 57-309 (312)
38 PRK02889 tolB translocation pr 99.7 7.5E-15 1.6E-19 161.3 25.8 203 193-408 198-403 (427)
39 PRK05137 tolB translocation pr 99.7 2.3E-14 5E-19 158.1 29.7 246 201-467 164-416 (435)
40 PRK00178 tolB translocation pr 99.7 1.2E-14 2.7E-19 160.5 26.5 203 193-408 201-406 (430)
41 PRK03629 tolB translocation pr 99.7 1.4E-14 3.1E-19 158.8 26.4 203 193-408 201-406 (429)
42 PRK01029 tolB translocation pr 99.7 2.9E-14 6.3E-19 155.8 28.1 254 194-468 140-408 (428)
43 PLN02652 hydrolase; alpha/beta 99.7 8.5E-15 1.9E-19 157.6 21.4 225 483-727 107-390 (395)
44 PRK04922 tolB translocation pr 99.6 5.8E-14 1.3E-18 154.8 25.5 203 193-408 206-411 (433)
45 PF02129 Peptidase_S15: X-Pro 99.6 2.1E-15 4.5E-20 155.5 12.7 194 495-702 1-271 (272)
46 COG2267 PldB Lysophospholipase 99.6 1.3E-14 2.7E-19 150.3 18.5 222 487-726 10-296 (298)
47 PF02230 Abhydrolase_2: Phosph 99.6 2.8E-15 6.1E-20 149.0 12.5 190 514-725 12-216 (216)
48 PRK03629 tolB translocation pr 99.6 5.6E-13 1.2E-17 146.4 29.0 242 203-466 164-409 (429)
49 PF12695 Abhydrolase_5: Alpha/ 99.6 7.2E-15 1.6E-19 136.3 11.9 145 518-702 1-145 (145)
50 TIGR00976 /NonD putative hydro 99.6 7E-14 1.5E-18 158.4 21.9 134 491-634 1-136 (550)
51 PF10503 Esterase_phd: Esteras 99.6 2E-14 4.3E-19 140.1 14.9 181 500-684 2-198 (220)
52 PF12715 Abhydrolase_7: Abhydr 99.6 4.5E-15 9.7E-20 151.9 9.6 200 481-690 83-336 (390)
53 PRK02889 tolB translocation pr 99.6 1.5E-12 3.3E-17 143.1 29.8 239 203-465 164-405 (427)
54 PF06500 DUF1100: Alpha/beta h 99.6 5.3E-14 1.1E-18 146.9 16.5 218 483-725 162-410 (411)
55 PRK04922 tolB translocation pr 99.6 1.2E-12 2.6E-17 144.4 28.2 243 202-466 167-414 (433)
56 PF07859 Abhydrolase_3: alpha/ 99.6 6.4E-15 1.4E-19 146.2 9.1 169 519-703 1-209 (211)
57 KOG1515 Arylacetamide deacetyl 99.6 2.8E-13 6.1E-18 140.0 21.3 220 485-723 62-334 (336)
58 PRK04792 tolB translocation pr 99.6 2E-12 4.3E-17 142.6 29.4 243 202-466 182-428 (448)
59 PRK00178 tolB translocation pr 99.6 2E-12 4.4E-17 142.9 28.7 251 193-466 154-409 (430)
60 PRK10985 putative hydrolase; P 99.5 9E-14 2E-18 147.2 16.8 136 487-631 32-169 (324)
61 PRK01742 tolB translocation pr 99.5 3.2E-12 7E-17 140.7 29.1 197 193-408 206-404 (429)
62 PLN02511 hydrolase 99.5 1.7E-13 3.7E-18 148.2 18.4 140 485-631 70-211 (388)
63 TIGR01607 PST-A Plasmodium sub 99.5 2.3E-13 5E-18 144.2 17.7 220 491-722 2-331 (332)
64 COG2945 Predicted hydrolase of 99.5 2.8E-13 6.1E-18 123.8 15.0 198 487-722 5-205 (210)
65 PRK00870 haloalkane dehalogena 99.5 1.3E-12 2.7E-17 137.4 21.4 129 485-628 20-148 (302)
66 COG3509 LpqC Poly(3-hydroxybut 99.5 2.4E-13 5.1E-18 133.0 14.4 129 494-630 42-179 (312)
67 PLN00021 chlorophyllase 99.5 2.2E-12 4.8E-17 134.1 22.7 207 497-729 37-288 (313)
68 TIGR03343 biphenyl_bphD 2-hydr 99.5 6.5E-13 1.4E-17 138.1 17.8 188 516-722 30-281 (282)
69 COG4099 Predicted peptidase [G 99.5 3.2E-13 6.9E-18 130.7 13.9 205 494-724 169-385 (387)
70 COG0400 Predicted esterase [Ge 99.5 7.3E-13 1.6E-17 127.7 14.6 186 514-725 16-206 (207)
71 PLN02824 hydrolase, alpha/beta 99.4 2E-12 4.3E-17 135.4 17.3 108 516-629 29-136 (294)
72 TIGR03611 RutD pyrimidine util 99.4 1.3E-12 2.8E-17 133.3 14.9 186 515-722 12-256 (257)
73 TIGR02800 propeller_TolB tol-p 99.4 9.7E-11 2.1E-15 129.1 29.7 244 199-464 152-398 (417)
74 PRK11071 esterase YqiA; Provis 99.4 3.4E-12 7.3E-17 123.6 15.6 165 517-721 2-188 (190)
75 TIGR03056 bchO_mg_che_rel puta 99.4 4.8E-12 1E-16 131.1 18.0 102 516-629 28-129 (278)
76 PRK01742 tolB translocation pr 99.4 8.6E-11 1.9E-15 129.4 28.4 190 202-408 168-361 (429)
77 TIGR03100 hydr1_PEP hydrolase, 99.4 1.2E-11 2.7E-16 127.6 19.8 131 487-631 3-135 (274)
78 PLN02965 Probable pheophorbida 99.4 7.3E-12 1.6E-16 128.1 18.1 186 518-722 5-251 (255)
79 TIGR03101 hydr2_PEP hydrolase, 99.4 1.8E-11 3.8E-16 123.9 20.0 194 489-694 3-241 (266)
80 TIGR02240 PHA_depoly_arom poly 99.4 3.8E-12 8.3E-17 131.9 15.6 184 517-724 26-266 (276)
81 COG0429 Predicted hydrolase of 99.4 8.3E-12 1.8E-16 124.6 16.9 129 490-628 53-184 (345)
82 TIGR02427 protocat_pcaD 3-oxoa 99.4 4.7E-12 1E-16 128.2 15.6 176 515-711 12-242 (251)
83 PRK03592 haloalkane dehalogena 99.4 2.1E-11 4.5E-16 127.8 20.6 100 516-628 27-126 (295)
84 PLN02872 triacylglycerol lipas 99.4 3.9E-12 8.5E-17 136.4 14.7 145 481-629 39-196 (395)
85 COG0823 TolB Periplasmic compo 99.4 1.1E-11 2.5E-16 133.4 17.5 206 192-408 194-402 (425)
86 PLN03087 BODYGUARD 1 domain co 99.4 1.8E-11 4E-16 133.6 17.9 124 491-629 180-308 (481)
87 TIGR01249 pro_imino_pep_1 prol 99.4 2.2E-11 4.7E-16 128.2 18.0 121 490-628 8-128 (306)
88 PRK10673 acyl-CoA esterase; Pr 99.4 8.9E-12 1.9E-16 127.4 14.4 187 514-723 14-254 (255)
89 PF00930 DPPIV_N: Dipeptidyl p 99.4 5.7E-11 1.2E-15 127.3 21.1 244 193-455 45-353 (353)
90 TIGR01250 pro_imino_pep_2 prol 99.3 5.1E-11 1.1E-15 123.6 20.0 106 516-629 25-130 (288)
91 PLN02679 hydrolase, alpha/beta 99.3 2.8E-11 6E-16 130.1 17.5 101 516-628 88-189 (360)
92 TIGR03695 menH_SHCHC 2-succiny 99.3 3.2E-11 6.9E-16 121.9 16.9 103 517-630 2-105 (251)
93 COG2936 Predicted acyl esteras 99.3 2.8E-11 6E-16 130.9 16.7 141 483-633 16-162 (563)
94 TIGR01738 bioH putative pimelo 99.3 1.4E-11 3.1E-16 124.3 13.6 171 517-713 5-239 (245)
95 TIGR01392 homoserO_Ac_trn homo 99.3 3.5E-11 7.6E-16 129.1 17.2 112 516-629 31-161 (351)
96 PRK06489 hypothetical protein; 99.3 4.2E-11 9.1E-16 128.9 17.2 110 516-628 69-187 (360)
97 PLN02211 methyl indole-3-aceta 99.3 6.5E-11 1.4E-15 122.0 17.8 106 514-629 16-121 (273)
98 PF12697 Abhydrolase_6: Alpha/ 99.3 1.9E-11 4E-16 121.6 13.3 102 519-631 1-102 (228)
99 PLN02894 hydrolase, alpha/beta 99.3 1E-10 2.2E-15 127.2 19.9 106 515-629 104-210 (402)
100 PRK14875 acetoin dehydrogenase 99.3 3.1E-11 6.6E-16 130.9 15.9 102 515-629 130-231 (371)
101 COG0823 TolB Periplasmic compo 99.3 4.1E-10 8.8E-15 121.5 24.2 189 212-409 168-359 (425)
102 TIGR01836 PHA_synth_III_C poly 99.3 4.5E-11 9.7E-16 128.2 16.3 109 515-632 62-173 (350)
103 PRK03204 haloalkane dehalogena 99.3 3.7E-11 8.1E-16 125.0 14.9 101 516-628 34-134 (286)
104 KOG4667 Predicted esterase [Li 99.3 4.5E-11 9.7E-16 110.9 13.0 201 486-708 10-245 (269)
105 PRK10349 carboxylesterase BioH 99.3 6.1E-11 1.3E-15 121.4 15.4 94 517-628 14-107 (256)
106 KOG3043 Predicted hydrolase re 99.3 3.6E-11 7.9E-16 112.8 12.2 184 517-725 40-241 (242)
107 KOG1838 Alpha/beta hydrolase [ 99.3 1.9E-10 4E-15 119.5 17.5 140 484-630 91-236 (409)
108 KOG4409 Predicted hydrolase/ac 99.3 2.2E-10 4.8E-15 115.2 17.0 105 515-629 89-194 (365)
109 PRK00175 metX homoserine O-ace 99.2 2E-10 4.4E-15 124.3 18.2 203 516-724 48-374 (379)
110 PF08840 BAAT_C: BAAT / Acyl-C 99.2 5.8E-11 1.3E-15 117.0 12.3 148 576-726 3-212 (213)
111 PRK07581 hypothetical protein; 99.2 1.6E-10 3.4E-15 123.6 16.3 109 515-628 40-157 (339)
112 PRK11126 2-succinyl-6-hydroxy- 99.2 9.4E-11 2E-15 118.9 13.9 98 517-629 3-101 (242)
113 PLN02578 hydrolase 99.2 2.8E-10 6.2E-15 122.1 17.6 99 517-628 87-185 (354)
114 KOG4178 Soluble epoxide hydrol 99.2 9.8E-10 2.1E-14 110.4 19.6 104 514-627 42-145 (322)
115 PRK10439 enterobactin/ferric e 99.2 1.4E-09 3E-14 117.5 21.0 198 487-702 181-391 (411)
116 PF03583 LIP: Secretory lipase 99.2 3.2E-10 7E-15 117.0 15.4 180 537-730 18-287 (290)
117 KOG4627 Kynurenine formamidase 99.2 2.1E-10 4.6E-15 105.5 11.3 189 515-724 66-267 (270)
118 PRK08775 homoserine O-acetyltr 99.2 7.5E-10 1.6E-14 118.4 17.5 166 540-724 94-339 (343)
119 PF00756 Esterase: Putative es 99.1 7E-11 1.5E-15 120.6 7.9 201 496-702 5-236 (251)
120 PLN03084 alpha/beta hydrolase 99.1 1.5E-09 3.3E-14 116.3 18.5 107 515-630 126-232 (383)
121 KOG1454 Predicted hydrolase/ac 99.1 8.4E-10 1.8E-14 115.6 14.8 192 514-724 56-324 (326)
122 PLN02980 2-oxoglutarate decarb 99.1 2E-09 4.3E-14 135.3 19.5 137 482-628 1342-1478(1655)
123 PF00930 DPPIV_N: Dipeptidyl p 99.1 1.4E-08 3E-13 108.9 23.0 201 194-398 104-350 (353)
124 PF12740 Chlorophyllase2: Chlo 99.1 2E-09 4.4E-14 106.3 15.0 179 499-703 4-206 (259)
125 PF03403 PAF-AH_p_II: Platelet 99.0 5.2E-09 1.1E-13 111.8 13.5 194 514-729 98-363 (379)
126 cd00312 Esterase_lipase Estera 98.9 3.2E-09 7E-14 119.6 10.2 129 498-631 78-214 (493)
127 PRK05855 short chain dehydroge 98.9 1.1E-08 2.3E-13 118.2 14.4 106 493-615 9-114 (582)
128 PRK06765 homoserine O-acetyltr 98.9 2.4E-08 5.2E-13 107.4 15.3 112 515-628 55-194 (389)
129 KOG2112 Lysophospholipase [Lip 98.9 4.5E-08 9.8E-13 91.9 14.4 187 517-723 4-203 (206)
130 TIGR01838 PHA_synth_I poly(R)- 98.9 3.1E-08 6.8E-13 109.5 15.3 108 517-632 189-304 (532)
131 PF05728 UPF0227: Uncharacteri 98.8 7.2E-08 1.6E-12 92.1 14.8 165 518-721 1-186 (187)
132 PF00561 Abhydrolase_1: alpha/ 98.8 2.4E-09 5.3E-14 107.1 5.1 78 546-629 1-78 (230)
133 KOG3101 Esterase D [General fu 98.8 1.5E-08 3.2E-13 93.9 8.4 200 497-702 26-261 (283)
134 COG2272 PnbA Carboxylesterase 98.8 1.3E-08 2.9E-13 107.4 8.6 126 499-631 80-218 (491)
135 PF14583 Pectate_lyase22: Olig 98.8 7.8E-06 1.7E-10 85.1 27.4 205 194-410 39-272 (386)
136 COG4757 Predicted alpha/beta h 98.7 6.8E-08 1.5E-12 91.2 10.9 202 489-703 8-263 (281)
137 PF06821 Ser_hydrolase: Serine 98.7 2.2E-07 4.8E-12 87.8 14.4 158 519-709 1-160 (171)
138 PF06342 DUF1057: Alpha/beta h 98.7 1E-06 2.2E-11 86.8 18.6 129 487-628 7-135 (297)
139 KOG3847 Phospholipase A2 (plat 98.7 3.5E-07 7.6E-12 90.1 14.7 169 512-702 114-328 (399)
140 KOG2564 Predicted acetyltransf 98.7 6.1E-08 1.3E-12 94.0 9.2 116 486-615 50-166 (343)
141 COG4188 Predicted dienelactone 98.7 1E-07 2.3E-12 97.6 11.1 130 486-617 38-181 (365)
142 PF08662 eIF2A: Eukaryotic tra 98.7 1.2E-06 2.5E-11 85.1 18.0 144 195-348 10-163 (194)
143 PF07224 Chlorophyllase: Chlor 98.7 9.1E-08 2E-12 92.3 9.8 137 479-632 9-159 (307)
144 cd00707 Pancreat_lipase_like P 98.7 8.3E-08 1.8E-12 98.6 10.2 114 513-631 33-148 (275)
145 COG0627 Predicted esterase [Ge 98.6 4.9E-07 1.1E-11 93.4 14.5 208 513-728 51-315 (316)
146 PF08538 DUF1749: Protein of u 98.6 1.7E-07 3.7E-12 94.5 10.0 109 516-632 33-150 (303)
147 TIGR03866 PQQ_ABC_repeats PQQ- 98.6 5.7E-05 1.2E-09 78.7 29.6 240 194-466 34-282 (300)
148 PF00135 COesterase: Carboxyle 98.6 1E-07 2.3E-12 108.7 8.8 127 498-628 108-243 (535)
149 PRK07868 acyl-CoA synthetase; 98.6 1.1E-06 2.4E-11 107.0 18.0 102 516-629 67-176 (994)
150 KOG2984 Predicted hydrolase [G 98.6 1.5E-07 3.3E-12 86.7 7.8 189 518-723 44-275 (277)
151 PF10340 DUF2424: Protein of u 98.5 2.9E-06 6.2E-11 88.5 17.2 185 501-704 108-351 (374)
152 PF02273 Acyl_transf_2: Acyl t 98.5 9.7E-07 2.1E-11 84.3 11.9 196 491-706 7-241 (294)
153 TIGR03230 lipo_lipase lipoprot 98.5 6.4E-07 1.4E-11 96.4 12.0 112 514-629 39-153 (442)
154 TIGR01839 PHA_synth_II poly(R) 98.5 1.4E-06 3.1E-11 95.4 14.7 89 535-632 237-330 (560)
155 COG4946 Uncharacterized protei 98.5 1.9E-05 4E-10 81.8 21.1 241 196-468 42-300 (668)
156 PRK13616 lipoprotein LpqB; Pro 98.5 7.8E-06 1.7E-10 92.3 20.3 159 192-365 351-529 (591)
157 COG3571 Predicted hydrolase of 98.5 1.2E-05 2.7E-10 71.5 16.7 166 515-703 13-182 (213)
158 COG2706 3-carboxymuconate cycl 98.5 0.00033 7.2E-09 71.0 28.6 263 193-470 42-330 (346)
159 PF09752 DUF2048: Uncharacteri 98.5 6.7E-06 1.5E-10 84.4 16.6 124 500-628 78-208 (348)
160 KOG0293 WD40 repeat-containing 98.4 1.6E-05 3.4E-10 80.9 18.6 192 193-408 227-425 (519)
161 KOG2382 Predicted alpha/beta h 98.4 3.3E-06 7.3E-11 85.3 13.4 193 514-724 50-313 (315)
162 KOG2551 Phospholipase/carboxyh 98.4 8.6E-06 1.9E-10 77.2 14.3 125 575-725 87-221 (230)
163 TIGR03866 PQQ_ABC_repeats PQQ- 98.4 9.7E-05 2.1E-09 76.9 24.2 193 194-409 76-280 (300)
164 COG2382 Fes Enterochelin ester 98.4 1.1E-05 2.4E-10 80.5 15.6 188 497-703 80-281 (299)
165 KOG0293 WD40 repeat-containing 98.4 8.9E-06 1.9E-10 82.7 15.0 195 191-409 270-471 (519)
166 COG2021 MET2 Homoserine acetyl 98.4 1.3E-05 2.9E-10 82.2 16.1 112 515-628 50-180 (368)
167 KOG2624 Triglyceride lipase-ch 98.3 1.7E-05 3.7E-10 84.3 16.9 143 480-630 42-199 (403)
168 COG2819 Predicted hydrolase of 98.3 3.9E-05 8.4E-10 75.7 17.7 44 588-631 130-173 (264)
169 PF02897 Peptidase_S9_N: Proly 98.3 0.00095 2E-08 73.5 30.1 247 129-408 133-404 (414)
170 PF03959 FSH1: Serine hydrolas 98.2 2.4E-06 5.3E-11 84.3 7.8 169 515-706 3-205 (212)
171 PRK11028 6-phosphogluconolacto 98.2 0.00096 2.1E-08 71.0 28.3 203 194-411 38-261 (330)
172 PF14583 Pectate_lyase22: Olig 98.2 0.00063 1.4E-08 71.1 25.5 160 196-365 86-274 (386)
173 TIGR03502 lipase_Pla1_cef extr 98.2 6.8E-06 1.5E-10 94.0 12.0 99 515-615 448-575 (792)
174 KOG1553 Predicted alpha/beta h 98.2 8.1E-06 1.7E-10 81.5 10.9 135 487-634 215-349 (517)
175 PF10282 Lactonase: Lactonase, 98.2 0.0019 4.1E-08 69.1 29.5 262 193-470 39-331 (345)
176 COG0596 MhpC Predicted hydrola 98.2 2.2E-05 4.8E-10 79.2 14.1 100 516-629 21-122 (282)
177 COG3545 Predicted esterase of 98.2 3.7E-05 8.1E-10 70.4 13.2 119 573-704 40-158 (181)
178 PF11144 DUF2920: Protein of u 98.2 0.00012 2.5E-09 76.8 18.5 147 576-725 163-368 (403)
179 PF08450 SGL: SMP-30/Gluconola 98.2 0.002 4.3E-08 65.3 27.6 202 195-426 4-223 (246)
180 PF10282 Lactonase: Lactonase, 98.1 0.0006 1.3E-08 72.9 23.7 202 196-412 92-326 (345)
181 KOG0318 WD40 repeat stress pro 98.1 0.00047 1E-08 72.7 21.6 193 192-408 192-392 (603)
182 COG3208 GrsT Predicted thioest 98.1 2.5E-05 5.3E-10 75.8 11.4 158 545-726 33-234 (244)
183 TIGR02658 TTQ_MADH_Hv methylam 98.1 0.001 2.2E-08 70.0 24.3 193 195-409 109-331 (352)
184 COG4946 Uncharacterized protei 98.1 0.00016 3.5E-09 75.0 17.8 124 218-350 383-510 (668)
185 PF05677 DUF818: Chlamydia CHL 98.1 2.9E-05 6.4E-10 78.7 12.3 136 485-633 111-258 (365)
186 PF11339 DUF3141: Protein of u 98.1 0.00012 2.6E-09 78.0 16.9 100 514-629 67-175 (581)
187 cd00200 WD40 WD40 domain, foun 98.1 0.0025 5.4E-08 64.8 27.0 192 192-409 11-208 (289)
188 PF08662 eIF2A: Eukaryotic tra 98.1 0.0001 2.2E-09 71.5 15.2 101 193-304 62-163 (194)
189 KOG0272 U4/U6 small nuclear ri 98.1 5.1E-05 1.1E-09 77.6 13.3 181 191-391 262-446 (459)
190 KOG0266 WD40 repeat-containing 98.1 0.00089 1.9E-08 74.3 24.6 196 190-409 203-410 (456)
191 PTZ00421 coronin; Provisional 98.1 0.0013 2.9E-08 73.1 25.7 200 192-409 77-291 (493)
192 PF12146 Hydrolase_4: Putative 98.1 1.1E-05 2.3E-10 65.4 6.8 77 496-586 1-77 (79)
193 KOG0318 WD40 repeat stress pro 98.1 0.0034 7.4E-08 66.4 26.3 203 190-408 59-308 (603)
194 KOG0279 G protein beta subunit 98.0 0.00076 1.6E-08 65.8 19.5 194 191-409 64-263 (315)
195 COG1073 Hydrolases of the alph 98.0 3.5E-05 7.5E-10 80.3 11.7 65 656-725 233-298 (299)
196 PF02239 Cytochrom_D1: Cytochr 98.0 0.012 2.6E-07 63.2 30.4 253 193-466 39-305 (369)
197 TIGR01849 PHB_depoly_PhaZ poly 98.0 0.00012 2.7E-09 78.1 14.4 86 535-632 120-210 (406)
198 KOG4497 Uncharacterized conser 97.9 0.00016 3.5E-09 71.7 13.1 139 195-350 13-155 (447)
199 KOG2314 Translation initiation 97.9 0.002 4.3E-08 68.5 21.8 201 193-408 308-525 (698)
200 PRK13616 lipoprotein LpqB; Pro 97.9 0.00027 5.9E-09 80.0 16.4 116 193-320 399-530 (591)
201 KOG0291 WD40-repeat-containing 97.9 0.0024 5.2E-08 70.4 22.1 196 190-408 350-550 (893)
202 PF06057 VirJ: Bacterial virul 97.9 0.0004 8.6E-09 65.3 13.8 147 536-709 20-180 (192)
203 PF07519 Tannase: Tannase and 97.9 0.00028 6E-09 78.0 15.1 129 498-632 16-152 (474)
204 TIGR02658 TTQ_MADH_Hv methylam 97.9 0.012 2.6E-07 62.0 26.4 116 201-320 11-139 (352)
205 PRK11028 6-phosphogluconolacto 97.8 0.03 6.6E-07 59.4 30.4 188 205-409 3-206 (330)
206 PRK10115 protease 2; Provision 97.8 0.0066 1.4E-07 70.7 27.0 211 238-466 129-349 (686)
207 KOG2139 WD40 repeat protein [G 97.8 0.0012 2.6E-08 66.7 17.3 104 189-305 194-301 (445)
208 cd00200 WD40 WD40 domain, foun 97.8 0.007 1.5E-07 61.4 23.7 193 193-409 54-250 (289)
209 COG3150 Predicted esterase [Ge 97.8 0.00046 1E-08 62.4 12.4 114 577-704 43-173 (191)
210 KOG0315 G-protein beta subunit 97.7 0.0038 8.3E-08 60.1 18.4 147 192-349 42-236 (311)
211 PTZ00420 coronin; Provisional 97.7 0.0068 1.5E-07 68.1 23.5 117 192-318 127-249 (568)
212 PF05577 Peptidase_S28: Serine 97.7 0.00016 3.5E-09 80.0 10.7 114 516-631 29-149 (434)
213 PTZ00420 coronin; Provisional 97.7 0.018 4E-07 64.7 26.8 198 192-408 76-293 (568)
214 KOG2055 WD40 repeat protein [G 97.7 0.0006 1.3E-08 70.8 13.7 157 192-362 305-468 (514)
215 COG2706 3-carboxymuconate cycl 97.7 0.078 1.7E-06 54.2 29.4 243 218-475 17-288 (346)
216 COG3243 PhaC Poly(3-hydroxyalk 97.7 0.00024 5.2E-09 74.1 10.4 90 535-632 129-219 (445)
217 PRK04940 hypothetical protein; 97.6 0.00073 1.6E-08 63.4 11.9 112 595-722 60-178 (180)
218 KOG1516 Carboxylesterase and r 97.6 0.0001 2.2E-09 84.2 7.3 126 499-629 97-231 (545)
219 PTZ00421 coronin; Provisional 97.6 0.013 2.8E-07 65.3 23.2 160 191-364 126-291 (493)
220 KOG1273 WD40 repeat protein [G 97.6 0.016 3.5E-07 57.7 20.7 148 195-365 28-185 (405)
221 KOG1407 WD40 repeat protein [F 97.6 0.0096 2.1E-07 57.8 18.8 177 195-394 111-289 (313)
222 KOG0266 WD40 repeat-containing 97.5 0.01 2.3E-07 65.9 21.8 198 190-408 159-364 (456)
223 PF06028 DUF915: Alpha/beta hy 97.5 0.00097 2.1E-08 67.0 11.6 197 516-722 12-253 (255)
224 KOG0271 Notchless-like WD40 re 97.5 0.0021 4.5E-08 65.4 13.7 125 193-333 118-251 (480)
225 PF02239 Cytochrom_D1: Cytochr 97.5 0.016 3.6E-07 62.1 21.6 175 218-408 17-202 (369)
226 COG3386 Gluconolactonase [Carb 97.5 0.033 7.2E-07 57.8 22.8 231 195-454 29-280 (307)
227 KOG0291 WD40-repeat-containing 97.4 0.041 8.8E-07 61.1 23.7 239 191-464 308-551 (893)
228 KOG0272 U4/U6 small nuclear ri 97.4 0.0018 3.9E-08 66.7 12.1 192 191-407 218-417 (459)
229 COG5354 Uncharacterized protei 97.4 0.02 4.4E-07 60.6 19.5 215 174-408 117-348 (561)
230 KOG0271 Notchless-like WD40 re 97.4 0.00097 2.1E-08 67.7 9.4 94 193-300 370-467 (480)
231 KOG0263 Transcription initiati 97.3 0.0055 1.2E-07 68.0 15.5 192 193-408 454-649 (707)
232 PF10647 Gmad1: Lipoprotein Lp 97.3 0.022 4.9E-07 57.7 18.9 152 192-350 25-186 (253)
233 PF00151 Lipase: Lipase; Inte 97.3 0.0003 6.6E-09 73.9 5.4 114 513-630 68-187 (331)
234 KOG1446 Histone H3 (Lys4) meth 97.3 0.04 8.6E-07 55.1 19.6 156 191-365 101-264 (311)
235 PF05990 DUF900: Alpha/beta hy 97.3 0.0011 2.5E-08 66.1 9.2 140 514-668 16-166 (233)
236 KOG0645 WD40 repeat protein [G 97.3 0.084 1.8E-06 51.8 21.0 193 192-404 16-223 (312)
237 KOG0645 WD40 repeat protein [G 97.2 0.093 2E-06 51.5 21.0 153 190-359 61-223 (312)
238 KOG4840 Predicted hydrolases o 97.2 0.0045 9.8E-08 58.6 11.8 105 518-633 38-147 (299)
239 KOG0772 Uncharacterized conser 97.2 0.17 3.8E-06 53.9 24.4 256 181-464 158-446 (641)
240 KOG1407 WD40 repeat protein [F 97.2 0.023 5.1E-07 55.2 16.8 190 192-408 22-219 (313)
241 KOG0973 Histone transcription 97.2 0.0074 1.6E-07 69.4 15.5 144 190-348 69-239 (942)
242 TIGR02171 Fb_sc_TIGR02171 Fibr 97.2 0.025 5.5E-07 65.1 19.0 119 202-328 318-453 (912)
243 PLN00181 protein SPA1-RELATED; 97.1 0.084 1.8E-06 63.3 24.7 192 192-408 485-690 (793)
244 PF01674 Lipase_2: Lipase (cla 97.1 0.0015 3.2E-08 64.0 7.9 91 516-615 2-95 (219)
245 COG4947 Uncharacterized protei 97.1 0.0012 2.5E-08 59.8 6.4 167 514-689 25-205 (227)
246 PF06433 Me-amine-dh_H: Methyl 97.1 0.064 1.4E-06 55.4 19.5 100 217-318 17-127 (342)
247 KOG0650 WD40 repeat nucleolar 97.1 0.019 4.2E-07 61.9 15.9 202 192-412 402-641 (733)
248 KOG2048 WD40 repeat protein [G 97.1 0.029 6.3E-07 61.4 17.4 157 190-363 382-548 (691)
249 PF07819 PGAP1: PGAP1-like pro 97.0 0.0041 8.9E-08 61.8 10.2 102 517-627 5-120 (225)
250 COG1770 PtrB Protease II [Amin 97.0 0.57 1.2E-05 52.3 27.0 161 239-408 132-300 (682)
251 PF10230 DUF2305: Uncharacteri 97.0 0.0035 7.6E-08 64.1 9.7 111 516-630 2-122 (266)
252 PTZ00472 serine carboxypeptida 97.0 0.0055 1.2E-07 67.8 11.6 131 496-632 60-218 (462)
253 KOG0275 Conserved WD40 repeat- 97.0 0.0074 1.6E-07 59.9 11.0 193 193-408 216-423 (508)
254 KOG0279 G protein beta subunit 97.0 0.0069 1.5E-07 59.3 10.6 100 192-302 194-301 (315)
255 KOG3253 Predicted alpha/beta h 97.0 0.013 2.8E-07 63.6 13.5 166 515-704 175-347 (784)
256 PF07082 DUF1350: Protein of u 96.9 0.018 3.9E-07 56.6 12.9 171 518-703 18-205 (250)
257 PLN02733 phosphatidylcholine-s 96.9 0.002 4.3E-08 70.2 6.7 90 532-630 108-201 (440)
258 KOG0263 Transcription initiati 96.8 0.091 2E-06 58.7 18.9 232 192-458 380-646 (707)
259 KOG2183 Prolylcarboxypeptidase 96.8 0.005 1.1E-07 63.9 8.6 89 543-631 109-204 (492)
260 KOG1273 WD40 repeat protein [G 96.7 0.078 1.7E-06 53.0 15.8 217 174-409 45-281 (405)
261 KOG0296 Angio-associated migra 96.7 0.52 1.1E-05 48.3 21.8 113 192-320 108-223 (399)
262 COG4814 Uncharacterized protei 96.7 0.028 6.1E-07 54.8 12.4 197 515-722 45-285 (288)
263 KOG2314 Translation initiation 96.7 0.059 1.3E-06 57.8 15.8 193 191-393 347-553 (698)
264 PF07676 PD40: WD40-like Beta 96.7 0.003 6.6E-08 43.3 4.4 29 193-221 11-39 (39)
265 KOG0286 G-protein beta subunit 96.7 0.5 1.1E-05 47.0 21.0 170 174-362 77-260 (343)
266 KOG2055 WD40 repeat protein [G 96.7 0.21 4.6E-06 52.5 19.4 212 176-408 201-417 (514)
267 PRK02888 nitrous-oxide reducta 96.7 0.26 5.7E-06 55.1 21.3 148 197-364 199-352 (635)
268 PF12048 DUF3530: Protein of u 96.5 0.13 2.8E-06 53.8 17.3 137 487-631 63-230 (310)
269 KOG2096 WD40 repeat protein [G 96.5 0.34 7.5E-06 48.7 18.5 210 179-408 77-308 (420)
270 KOG2315 Predicted translation 96.5 0.35 7.5E-06 52.3 19.8 240 195-461 130-390 (566)
271 KOG0277 Peroxisomal targeting 96.4 0.2 4.3E-06 48.8 16.2 195 195-408 13-221 (311)
272 KOG2315 Predicted translation 96.4 0.15 3.2E-06 55.0 16.8 142 194-349 221-375 (566)
273 PF08450 SGL: SMP-30/Gluconola 96.4 0.28 6E-06 49.6 18.7 151 189-348 84-245 (246)
274 KOG0296 Angio-associated migra 96.4 0.8 1.7E-05 47.0 20.9 154 191-364 65-221 (399)
275 PF00975 Thioesterase: Thioest 96.4 0.012 2.5E-07 58.8 8.3 96 518-627 2-101 (229)
276 KOG0305 Anaphase promoting com 96.4 0.25 5.4E-06 53.9 18.6 205 177-408 167-376 (484)
277 PF06977 SdiA-regulated: SdiA- 96.4 1.3 2.8E-05 44.5 23.2 208 174-397 7-241 (248)
278 KOG0643 Translation initiation 96.3 0.51 1.1E-05 46.4 18.3 189 193-398 55-254 (327)
279 KOG1274 WD40 repeat protein [G 96.3 0.19 4E-06 57.3 17.6 166 173-363 86-262 (933)
280 KOG0772 Uncharacterized conser 96.3 0.12 2.6E-06 55.1 15.2 163 190-364 268-446 (641)
281 KOG0289 mRNA splicing factor [ 96.3 0.46 1E-05 49.7 19.0 151 193-363 306-462 (506)
282 PF00450 Peptidase_S10: Serine 96.3 0.063 1.4E-06 59.0 13.9 140 489-632 16-183 (415)
283 KOG0973 Histone transcription 96.2 0.065 1.4E-06 62.0 13.7 116 191-316 130-252 (942)
284 KOG2139 WD40 repeat protein [G 96.2 0.2 4.2E-06 51.2 15.2 198 192-408 100-311 (445)
285 COG3391 Uncharacterized conser 96.2 0.97 2.1E-05 48.9 22.1 200 193-408 76-283 (381)
286 KOG0315 G-protein beta subunit 96.1 0.77 1.7E-05 44.8 18.1 176 216-409 19-198 (311)
287 TIGR02171 Fb_sc_TIGR02171 Fibr 96.1 0.073 1.6E-06 61.5 13.3 89 192-281 351-453 (912)
288 PLN00181 protein SPA1-RELATED; 96.1 1.7 3.8E-05 52.1 25.9 138 193-347 535-679 (793)
289 PF10142 PhoPQ_related: PhoPQ- 96.1 0.44 9.4E-06 50.6 18.1 135 582-728 159-324 (367)
290 KOG0305 Anaphase promoting com 96.1 0.18 3.9E-06 55.0 15.5 154 191-360 302-460 (484)
291 KOG2931 Differentiation-relate 96.1 0.12 2.6E-06 51.7 12.9 130 487-629 23-156 (326)
292 PF04762 IKI3: IKI3 family; I 96.0 2.4 5.2E-05 51.3 26.4 116 287-408 212-333 (928)
293 PF03096 Ndr: Ndr family; Int 96.0 0.062 1.3E-06 54.3 11.1 112 513-630 20-134 (283)
294 PF06433 Me-amine-dh_H: Methyl 96.0 0.73 1.6E-05 47.8 18.9 201 193-409 97-321 (342)
295 PF07433 DUF1513: Protein of u 96.0 1.5 3.3E-05 44.9 20.7 63 189-251 49-115 (305)
296 KOG0273 Beta-transducin family 96.0 1.3 2.8E-05 47.0 20.4 151 191-361 236-389 (524)
297 KOG4497 Uncharacterized conser 95.9 0.29 6.2E-06 49.4 15.0 88 290-387 324-412 (447)
298 PF07433 DUF1513: Protein of u 95.8 1.9 4.2E-05 44.2 20.9 120 195-320 9-149 (305)
299 PF05705 DUF829: Eukaryotic pr 95.8 0.077 1.7E-06 53.5 11.0 46 655-703 178-223 (240)
300 PLN02919 haloacid dehalogenase 95.8 2.6 5.6E-05 51.9 25.7 196 193-409 626-889 (1057)
301 KOG2096 WD40 repeat protein [G 95.7 0.13 2.7E-06 51.7 11.4 142 194-347 232-392 (420)
302 KOG2394 WD40 protein DMR-N9 [G 95.7 0.031 6.7E-07 59.7 7.6 57 192-253 292-350 (636)
303 COG4782 Uncharacterized protei 95.7 0.036 7.8E-07 57.1 7.7 111 515-632 115-236 (377)
304 KOG0283 WD40 repeat-containing 95.6 0.61 1.3E-05 52.8 17.7 148 241-408 375-532 (712)
305 KOG4389 Acetylcholinesterase/B 95.6 0.019 4.1E-07 61.0 5.6 128 499-631 121-256 (601)
306 KOG0275 Conserved WD40 repeat- 95.6 0.058 1.3E-06 53.8 8.5 98 193-304 266-368 (508)
307 KOG1063 RNA polymerase II elon 95.6 0.1 2.3E-06 57.4 11.2 119 187-314 523-647 (764)
308 KOG0303 Actin-binding protein 95.5 0.87 1.9E-05 47.2 16.9 113 192-320 83-206 (472)
309 KOG0268 Sof1-like rRNA process 95.5 0.077 1.7E-06 54.0 9.3 158 189-362 186-346 (433)
310 KOG1446 Histone H3 (Lys4) meth 95.5 3.2 6.9E-05 42.0 28.7 243 192-468 16-267 (311)
311 KOG1445 Tumor-specific antigen 95.5 0.069 1.5E-06 58.0 9.4 112 192-317 679-798 (1012)
312 KOG0316 Conserved WD40 repeat- 95.5 1.4 3.1E-05 42.6 16.9 158 193-364 62-258 (307)
313 KOG0282 mRNA splicing factor [ 95.4 0.14 3.1E-06 54.1 11.2 71 192-271 260-332 (503)
314 KOG1274 WD40 repeat protein [G 95.4 2.2 4.7E-05 49.1 21.1 99 241-350 102-210 (933)
315 PF08386 Abhydrolase_4: TAP-li 95.4 0.025 5.4E-07 48.5 4.9 60 655-723 34-93 (103)
316 KOG0771 Prolactin regulatory e 95.4 0.36 7.8E-06 50.3 13.9 157 191-362 187-355 (398)
317 KOG0273 Beta-transducin family 95.3 2.5 5.5E-05 44.9 19.8 195 192-408 278-482 (524)
318 KOG0771 Prolactin regulatory e 95.3 0.51 1.1E-05 49.2 14.5 177 194-388 148-335 (398)
319 KOG2182 Hydrolytic enzymes of 95.3 0.11 2.3E-06 55.9 9.9 116 515-630 85-207 (514)
320 COG5354 Uncharacterized protei 95.3 0.37 7.9E-06 51.5 13.6 143 195-348 227-379 (561)
321 KOG2237 Predicted serine prote 95.2 0.32 6.9E-06 53.8 13.5 82 172-254 106-189 (712)
322 KOG0639 Transducin-like enhanc 95.2 0.67 1.5E-05 49.4 15.2 187 193-408 468-663 (705)
323 KOG4388 Hormone-sensitive lipa 95.1 0.095 2.1E-06 56.8 9.0 87 515-613 395-487 (880)
324 PF11187 DUF2974: Protein of u 95.1 0.047 1E-06 54.0 6.3 75 553-628 43-121 (224)
325 KOG0278 Serine/threonine kinas 95.1 1 2.3E-05 43.8 14.9 186 193-405 103-296 (334)
326 KOG3967 Uncharacterized conser 94.9 0.43 9.2E-06 45.3 11.6 111 501-619 88-214 (297)
327 PF07676 PD40: WD40-like Beta 94.9 0.06 1.3E-06 36.7 4.7 28 286-313 10-39 (39)
328 KOG0286 G-protein beta subunit 94.8 4.9 0.00011 40.3 22.3 194 193-409 58-260 (343)
329 COG3319 Thioesterase domains o 94.8 0.042 9.1E-07 55.2 5.3 84 517-615 1-85 (257)
330 KOG3975 Uncharacterized conser 94.8 2.2 4.8E-05 41.9 16.4 117 495-615 9-130 (301)
331 KOG0306 WD40-repeat-containing 94.8 0.84 1.8E-05 51.2 15.2 193 192-408 456-664 (888)
332 KOG0284 Polyadenylation factor 94.8 0.73 1.6E-05 47.9 13.9 110 289-408 227-337 (464)
333 KOG1920 IkappaB kinase complex 94.7 13 0.00028 44.7 26.3 133 288-429 199-338 (1265)
334 KOG2110 Uncharacterized conser 94.7 0.47 1E-05 48.7 12.2 114 192-316 131-249 (391)
335 PF02089 Palm_thioest: Palmito 94.7 0.26 5.6E-06 49.9 10.3 106 513-627 3-113 (279)
336 KOG1445 Tumor-specific antigen 94.5 0.44 9.5E-06 52.1 11.9 142 191-347 628-783 (1012)
337 KOG0265 U5 snRNP-specific prot 94.5 4.6 0.0001 40.6 18.0 111 192-314 49-162 (338)
338 KOG0639 Transducin-like enhanc 94.4 0.45 9.7E-06 50.7 11.6 137 195-350 514-654 (705)
339 KOG0289 mRNA splicing factor [ 94.4 0.88 1.9E-05 47.8 13.4 117 193-325 350-469 (506)
340 KOG0282 mRNA splicing factor [ 94.3 0.51 1.1E-05 50.1 11.9 151 191-362 215-373 (503)
341 COG3386 Gluconolactonase [Carb 94.3 1.9 4E-05 45.0 16.1 154 191-350 111-277 (307)
342 KOG0306 WD40-repeat-containing 94.3 2.3 5E-05 47.8 17.1 190 196-406 418-620 (888)
343 KOG0295 WD40 repeat-containing 94.3 1.4 3.1E-05 45.2 14.4 117 192-320 237-367 (406)
344 KOG2919 Guanine nucleotide-bin 94.1 7.6 0.00016 39.6 20.0 114 288-411 162-284 (406)
345 KOG1009 Chromatin assembly com 94.1 0.86 1.9E-05 47.4 12.7 105 189-306 64-187 (434)
346 KOG2048 WD40 repeat protein [G 94.1 11 0.00025 42.0 21.8 139 193-347 28-173 (691)
347 KOG2919 Guanine nucleotide-bin 94.1 2.8 6.1E-05 42.5 15.8 148 199-364 120-282 (406)
348 KOG0264 Nucleosome remodeling 94.0 3.6 7.9E-05 43.5 17.2 196 196-408 183-404 (422)
349 PF05057 DUF676: Putative seri 94.0 0.058 1.3E-06 53.3 4.2 20 595-614 78-97 (217)
350 KOG0647 mRNA export protein (c 94.0 7.6 0.00016 39.2 19.4 188 192-399 29-221 (347)
351 KOG0643 Translation initiation 94.0 1.6 3.4E-05 43.1 13.5 117 191-318 94-221 (327)
352 KOG0640 mRNA cleavage stimulat 94.0 1.4 3.1E-05 44.2 13.4 194 193-409 115-336 (430)
353 PRK10252 entF enterobactin syn 93.9 0.21 4.6E-06 63.6 10.2 99 516-628 1068-1169(1296)
354 KOG0278 Serine/threonine kinas 93.9 1.6 3.4E-05 42.7 13.2 56 192-252 145-201 (334)
355 PLN02919 haloacid dehalogenase 93.8 20 0.00043 44.3 26.0 154 194-364 571-771 (1057)
356 COG3490 Uncharacterized protei 93.7 8.4 0.00018 38.7 20.0 130 197-346 42-179 (366)
357 KOG0310 Conserved WD40 repeat- 93.7 10 0.00023 40.6 19.9 112 193-318 71-187 (487)
358 KOG2110 Uncharacterized conser 93.7 3 6.5E-05 43.1 15.4 134 218-362 107-249 (391)
359 KOG4378 Nuclear protein COP1 [ 93.7 2.1 4.7E-05 45.7 14.8 122 192-328 166-292 (673)
360 KOG2565 Predicted hydrolases o 93.7 0.25 5.5E-06 50.9 7.9 117 495-624 132-258 (469)
361 KOG0319 WD40-repeat-containing 93.6 3.8 8.3E-05 46.0 17.3 194 190-408 192-395 (775)
362 PF10647 Gmad1: Lipoprotein Lp 93.6 9.1 0.0002 38.7 19.9 159 238-408 26-197 (253)
363 PLN03016 sinapoylglucose-malat 93.4 0.83 1.8E-05 50.1 12.0 131 496-632 49-212 (433)
364 KOG0288 WD40 repeat protein Ti 93.3 1.3 2.8E-05 46.2 12.4 146 190-346 294-449 (459)
365 PF02450 LCAT: Lecithin:choles 93.3 0.21 4.6E-06 54.1 7.4 82 533-629 66-159 (389)
366 KOG1539 WD repeat protein [Gen 93.2 0.31 6.7E-06 55.1 8.2 59 192-255 578-638 (910)
367 KOG0310 Conserved WD40 repeat- 93.1 3.8 8.3E-05 43.8 15.6 197 190-412 26-229 (487)
368 COG3490 Uncharacterized protei 93.0 11 0.00024 37.9 17.8 101 195-303 72-180 (366)
369 COG1506 DAP2 Dipeptidyl aminop 93.0 9.7 0.00021 44.2 20.8 207 191-407 101-343 (620)
370 KOG0646 WD40 repeat protein [G 92.9 9.8 0.00021 40.6 18.2 58 193-256 84-144 (476)
371 COG1075 LipA Predicted acetylt 92.9 0.27 5.8E-06 52.2 7.3 97 518-628 61-162 (336)
372 KOG1009 Chromatin assembly com 92.9 5 0.00011 42.0 15.8 106 193-303 126-249 (434)
373 KOG0319 WD40-repeat-containing 92.9 3.7 7.9E-05 46.2 15.7 156 190-364 19-180 (775)
374 KOG0288 WD40 repeat protein Ti 92.8 0.71 1.5E-05 48.1 9.6 99 192-302 343-449 (459)
375 KOG1524 WD40 repeat-containing 92.7 2.2 4.8E-05 46.1 13.2 88 193-305 189-277 (737)
376 PLN02209 serine carboxypeptida 92.6 0.53 1.2E-05 51.6 9.3 139 489-632 44-214 (437)
377 KOG0283 WD40 repeat-containing 92.6 1.1 2.5E-05 50.6 11.7 122 178-319 444-578 (712)
378 KOG1538 Uncharacterized conser 92.5 3.3 7.1E-05 46.0 14.5 53 190-249 12-67 (1081)
379 KOG0313 Microtubule binding pr 92.5 4.9 0.00011 41.7 14.9 116 190-316 260-377 (423)
380 PRK13613 lipoprotein LpqB; Pro 92.4 11 0.00023 43.3 19.4 165 192-366 364-542 (599)
381 KOG0265 U5 snRNP-specific prot 92.1 15 0.00032 37.2 18.9 36 191-231 91-126 (338)
382 KOG0307 Vesicle coat complex C 92.0 1.3 2.8E-05 52.1 11.5 176 173-364 89-285 (1049)
383 KOG0640 mRNA cleavage stimulat 91.9 2.9 6.3E-05 42.1 12.2 133 174-320 194-338 (430)
384 KOG1282 Serine carboxypeptidas 91.9 2.3 5E-05 46.5 12.8 140 489-632 49-215 (454)
385 PF01764 Lipase_3: Lipase (cla 91.9 0.32 7E-06 44.1 5.6 53 576-630 47-106 (140)
386 TIGR03712 acc_sec_asp2 accesso 91.8 11 0.00024 41.1 17.3 121 494-635 273-395 (511)
387 KOG0302 Ribosome Assembly prot 91.8 14 0.0003 38.5 17.2 144 195-350 216-369 (440)
388 PF04083 Abhydro_lipase: Parti 91.7 0.49 1.1E-05 36.2 5.4 50 482-531 8-58 (63)
389 PF13360 PQQ_2: PQQ-like domai 91.7 15 0.00032 36.4 20.2 185 199-409 33-231 (238)
390 KOG2106 Uncharacterized conser 91.7 2.1 4.6E-05 45.9 11.7 94 196-301 413-508 (626)
391 KOG0313 Microtubule binding pr 91.5 13 0.00028 38.8 16.6 190 191-405 194-415 (423)
392 cd00741 Lipase Lipase. Lipase 91.1 0.34 7.4E-06 44.9 4.9 39 577-617 12-50 (153)
393 KOG1408 WD40 repeat protein [F 91.0 13 0.00029 41.9 17.2 108 289-409 601-714 (1080)
394 KOG1007 WD repeat protein TSSC 90.4 4.5 9.7E-05 40.5 11.9 113 192-320 125-248 (370)
395 KOG0641 WD40 repeat protein [G 90.4 18 0.00038 34.9 25.3 208 174-408 77-303 (350)
396 KOG0303 Actin-binding protein 89.9 11 0.00024 39.4 14.7 72 192-271 133-205 (472)
397 PF03283 PAE: Pectinacetyleste 89.7 0.35 7.6E-06 51.5 4.1 37 577-613 138-174 (361)
398 PF11288 DUF3089: Protein of u 89.6 0.84 1.8E-05 44.1 6.2 84 545-631 45-138 (207)
399 KOG0302 Ribosome Assembly prot 89.4 4.4 9.6E-05 42.0 11.3 130 177-317 246-380 (440)
400 PF11768 DUF3312: Protein of u 89.2 5.5 0.00012 44.0 12.6 84 193-285 262-345 (545)
401 COG3204 Uncharacterized protei 88.7 30 0.00065 35.2 23.2 175 174-364 71-264 (316)
402 KOG0290 Conserved WD40 repeat- 88.7 14 0.00031 37.1 13.8 202 175-395 137-356 (364)
403 PLN02454 triacylglycerol lipas 87.7 1.5 3.3E-05 47.0 7.2 56 575-630 208-271 (414)
404 PF04762 IKI3: IKI3 family; I 87.7 5.2 0.00011 48.4 12.6 109 194-304 213-324 (928)
405 KOG1523 Actin-related protein 87.7 4.3 9.2E-05 41.2 9.8 129 175-319 93-238 (361)
406 KOG0299 U3 snoRNP-associated p 87.7 24 0.00051 37.8 15.5 59 192-255 204-265 (479)
407 KOG0294 WD40 repeat-containing 87.5 30 0.00065 35.3 15.4 68 192-270 129-198 (362)
408 KOG0284 Polyadenylation factor 87.1 12 0.00026 39.3 12.8 188 191-398 181-372 (464)
409 PRK13614 lipoprotein LpqB; Pro 86.9 31 0.00068 39.2 17.3 161 192-364 344-519 (573)
410 KOG1539 WD repeat protein [Gen 86.8 3.1 6.8E-05 47.4 9.2 80 215-303 554-636 (910)
411 TIGR02604 Piru_Ver_Nterm putat 86.7 20 0.00044 38.5 15.5 100 239-348 75-202 (367)
412 KOG0277 Peroxisomal targeting 86.6 36 0.00078 33.8 15.8 154 193-364 63-222 (311)
413 KOG2394 WD40 protein DMR-N9 [G 86.5 5.2 0.00011 43.4 10.2 126 191-347 220-351 (636)
414 KOG4499 Ca2+-binding protein R 86.5 16 0.00034 35.7 12.4 119 193-320 111-244 (310)
415 cd00519 Lipase_3 Lipase (class 86.3 1.3 2.8E-05 44.1 5.6 52 577-630 112-168 (229)
416 KOG2541 Palmitoyl protein thio 86.0 5.5 0.00012 39.7 9.4 90 516-617 24-114 (296)
417 KOG1920 IkappaB kinase complex 85.9 55 0.0012 39.7 18.7 118 195-316 200-321 (1265)
418 PRK02888 nitrous-oxide reducta 85.8 43 0.00093 38.1 17.4 161 289-464 239-405 (635)
419 KOG1524 WD40 repeat-containing 85.7 8.8 0.00019 41.7 11.3 57 193-255 107-166 (737)
420 smart00824 PKS_TE Thioesterase 85.5 3.5 7.6E-05 39.7 8.2 80 534-626 15-98 (212)
421 PF04053 Coatomer_WDAD: Coatom 85.3 7.9 0.00017 42.6 11.4 168 193-395 35-213 (443)
422 KOG4328 WD40 protein [Function 85.3 27 0.00057 37.5 14.4 197 192-407 188-398 (498)
423 PLN02408 phospholipase A1 85.1 1.3 2.9E-05 46.7 5.1 38 577-614 182-219 (365)
424 PLN02517 phosphatidylcholine-s 85.1 1.3 2.8E-05 49.3 5.1 74 534-614 158-232 (642)
425 KOG0270 WD40 repeat-containing 85.0 57 0.0012 34.9 16.6 153 240-409 248-405 (463)
426 PLN02606 palmitoyl-protein thi 84.7 8 0.00017 39.7 10.2 101 514-626 25-128 (306)
427 KOG0269 WD40 repeat-containing 84.7 13 0.00027 42.4 12.4 118 192-319 178-298 (839)
428 KOG3724 Negative regulator of 84.6 1.2 2.7E-05 50.5 4.7 45 577-622 157-208 (973)
429 PLN02571 triacylglycerol lipas 84.2 1.5 3.3E-05 47.0 5.1 40 575-614 206-245 (413)
430 KOG1408 WD40 repeat protein [F 84.1 7.7 0.00017 43.6 10.3 56 192-250 80-137 (1080)
431 KOG0285 Pleiotropic regulator 83.9 58 0.0013 33.9 21.0 56 192-253 153-211 (460)
432 PLN02633 palmitoyl protein thi 83.7 9.4 0.0002 39.3 10.2 102 514-627 24-128 (314)
433 KOG0641 WD40 repeat protein [G 82.5 41 0.00089 32.5 13.2 113 190-314 231-348 (350)
434 KOG0290 Conserved WD40 repeat- 82.4 59 0.0013 32.9 18.3 207 193-409 47-275 (364)
435 PLN02324 triacylglycerol lipas 82.1 2 4.4E-05 46.0 5.0 40 575-614 195-234 (415)
436 KOG4227 WD40 repeat protein [G 82.1 30 0.00064 36.2 12.9 148 192-353 58-219 (609)
437 PF07995 GSDH: Glucose / Sorbo 82.0 73 0.0016 33.7 18.0 117 194-318 5-157 (331)
438 COG2939 Carboxypeptidase C (ca 81.4 4.8 0.0001 43.9 7.5 154 513-678 98-275 (498)
439 PF06259 Abhydrolase_8: Alpha/ 81.2 3.8 8.2E-05 38.8 6.0 77 578-668 93-170 (177)
440 COG3391 Uncharacterized conser 81.2 85 0.0019 33.9 27.5 245 194-466 34-286 (381)
441 PF05694 SBP56: 56kDa selenium 80.9 27 0.00058 37.8 12.6 128 217-349 222-394 (461)
442 PLN02802 triacylglycerol lipas 80.8 2.4 5.1E-05 46.5 5.0 38 577-614 312-349 (509)
443 KOG4378 Nuclear protein COP1 [ 80.6 92 0.002 33.9 16.9 157 191-365 122-282 (673)
444 KOG0264 Nucleosome remodeling 80.4 87 0.0019 33.5 21.3 115 289-409 182-304 (422)
445 PRK13615 lipoprotein LpqB; Pro 80.0 1.1E+02 0.0025 34.6 19.2 157 193-365 336-504 (557)
446 PLN00413 triacylglycerol lipas 79.8 2.9 6.4E-05 45.4 5.3 38 575-614 266-303 (479)
447 COG3946 VirJ Type IV secretory 79.6 4.6 0.0001 42.7 6.4 72 537-619 279-350 (456)
448 KOG4328 WD40 protein [Function 78.2 19 0.00041 38.5 10.3 155 192-360 236-398 (498)
449 PF03088 Str_synth: Strictosid 78.2 24 0.00053 29.1 9.1 70 290-364 3-88 (89)
450 KOG2321 WD40 repeat protein [G 77.7 72 0.0016 35.4 14.7 59 194-256 55-116 (703)
451 PLN02761 lipase class 3 family 77.3 3.5 7.6E-05 45.3 5.0 40 575-614 270-313 (527)
452 PLN02753 triacylglycerol lipas 77.0 3.6 7.9E-05 45.3 5.0 40 575-614 289-331 (531)
453 KOG0269 WD40 repeat-containing 76.9 81 0.0018 36.3 15.2 208 174-398 110-332 (839)
454 KOG1332 Vesicle coat complex C 76.8 29 0.00062 34.2 10.3 128 192-325 151-294 (299)
455 PLN02934 triacylglycerol lipas 76.6 3.8 8.2E-05 45.0 5.0 38 575-614 303-340 (515)
456 KOG4283 Transcription-coupled 76.5 92 0.002 31.7 17.8 119 190-319 101-223 (397)
457 TIGR03606 non_repeat_PQQ dehyd 76.5 85 0.0018 34.7 15.4 107 239-350 33-166 (454)
458 KOG0307 Vesicle coat complex C 76.4 14 0.0003 43.9 9.7 199 193-408 67-284 (1049)
459 KOG0276 Vesicle coat complex C 76.4 95 0.002 34.9 15.2 130 213-350 73-205 (794)
460 PLN02162 triacylglycerol lipas 76.4 4.2 9.2E-05 44.1 5.3 38 575-614 260-297 (475)
461 KOG2521 Uncharacterized conser 76.2 32 0.00069 36.3 11.5 71 656-730 226-296 (350)
462 PLN02310 triacylglycerol lipas 75.2 4.5 9.7E-05 43.4 5.1 40 575-614 187-228 (405)
463 KOG2041 WD40 repeat protein [G 74.8 1.6E+02 0.0035 33.7 19.2 58 190-252 115-174 (1189)
464 PF05576 Peptidase_S37: PS-10 73.5 6.1 0.00013 42.0 5.4 106 515-631 62-170 (448)
465 KOG2369 Lecithin:cholesterol a 73.5 4.4 9.5E-05 43.8 4.5 76 533-618 125-205 (473)
466 KOG0294 WD40 repeat-containing 73.3 1.2E+02 0.0025 31.3 18.6 139 192-349 45-189 (362)
467 PF01083 Cutinase: Cutinase; 73.1 6.1 0.00013 37.6 5.0 81 576-670 64-150 (179)
468 PF03088 Str_synth: Strictosid 73.1 40 0.00087 27.8 9.1 71 241-317 3-87 (89)
469 PF15492 Nbas_N: Neuroblastoma 72.9 65 0.0014 32.6 12.1 33 193-230 46-78 (282)
470 KOG1963 WD40 repeat protein [G 72.9 36 0.00079 39.4 11.6 110 193-318 208-323 (792)
471 KOG0268 Sof1-like rRNA process 72.9 5.9 0.00013 40.9 4.9 111 194-317 233-347 (433)
472 PLN02719 triacylglycerol lipas 72.0 5.9 0.00013 43.5 5.1 40 575-614 275-317 (518)
473 PF13449 Phytase-like: Esteras 71.2 1.4E+02 0.0031 31.4 24.1 124 240-364 89-252 (326)
474 PRK13613 lipoprotein LpqB; Pro 71.0 1.2E+02 0.0026 34.9 15.5 124 192-320 410-542 (599)
475 KOG1063 RNA polymerase II elon 70.9 1.9E+02 0.0042 33.0 16.2 193 197-402 152-387 (764)
476 PLN03037 lipase class 3 family 70.2 6.2 0.00014 43.4 4.8 38 577-614 298-337 (525)
477 KOG1523 Actin-related protein 68.4 50 0.0011 33.9 10.2 104 192-306 12-122 (361)
478 PRK13614 lipoprotein LpqB; Pro 68.4 43 0.00093 38.1 11.1 79 192-271 435-520 (573)
479 KOG2106 Uncharacterized conser 68.3 1.9E+02 0.0041 31.8 21.1 104 290-405 413-518 (626)
480 KOG1034 Transcriptional repres 68.2 64 0.0014 33.3 10.9 93 216-315 114-211 (385)
481 TIGR03606 non_repeat_PQQ dehyd 66.8 1.2E+02 0.0026 33.6 13.8 108 193-306 32-166 (454)
482 KOG2321 WD40 repeat protein [G 66.6 93 0.002 34.6 12.4 159 192-370 177-351 (703)
483 PF05096 Glu_cyclase_2: Glutam 66.3 1.5E+02 0.0033 29.9 20.8 161 284-467 44-207 (264)
484 KOG0281 Beta-TrCP (transducin 66.1 26 0.00057 36.1 7.8 173 212-409 252-429 (499)
485 TIGR03300 assembly_YfgL outer 66.1 1.9E+02 0.0041 30.9 28.2 237 218-497 116-372 (377)
486 PF06977 SdiA-regulated: SdiA- 65.2 87 0.0019 31.5 11.5 118 335-462 28-148 (248)
487 KOG1036 Mitotic spindle checkp 64.7 1.7E+02 0.0038 29.9 20.3 71 192-272 15-86 (323)
488 KOG0270 WD40 repeat-containing 64.7 2.1E+02 0.0045 30.9 17.4 99 212-320 261-363 (463)
489 PRK13615 lipoprotein LpqB; Pro 64.5 57 0.0012 37.0 11.0 79 192-271 418-504 (557)
490 COG5276 Uncharacterized conser 64.2 1.8E+02 0.0038 29.9 18.8 176 272-464 74-256 (370)
491 KOG4569 Predicted lipase [Lipi 63.8 9.9 0.00021 40.3 4.8 36 577-614 155-190 (336)
492 PF07995 GSDH: Glucose / Sorbo 62.9 1.2E+02 0.0026 32.0 12.9 117 240-364 6-157 (331)
493 PLN02847 triacylglycerol lipas 62.3 45 0.00098 37.6 9.4 20 595-614 251-270 (633)
494 PRK11138 outer membrane biogen 61.5 2.4E+02 0.0052 30.5 26.1 237 218-497 131-387 (394)
495 KOG3914 WD repeat protein WDR4 60.3 2.3E+02 0.0049 30.2 13.5 112 291-412 114-226 (390)
496 TIGR03032 conserved hypothetic 60.1 1.5E+02 0.0031 30.9 11.9 74 220-305 188-261 (335)
497 KOG1963 WD40 repeat protein [G 60.0 21 0.00045 41.3 6.6 53 192-249 253-306 (792)
498 KOG4547 WD40 repeat-containing 58.6 99 0.0021 34.3 11.1 99 191-297 145-250 (541)
499 PF13360 PQQ_2: PQQ-like domai 58.5 1.9E+02 0.004 28.3 25.5 133 218-370 4-146 (238)
500 KOG0650 WD40 repeat nucleolar 58.3 1.5E+02 0.0033 33.2 12.3 114 192-319 523-639 (733)
No 1
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-117 Score=936.29 Aligned_cols=651 Identities=50% Similarity=0.865 Sum_probs=615.7
Q ss_pred CCCCCCcccceEEeecCCeeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHccccccCcCCcEE
Q 004690 50 PSPPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFR 129 (736)
Q Consensus 50 ~~~P~~~~~~~~~~~hG~~~~Dpy~wLed~~~~~~~v~~~l~~en~~~~~~l~~~~~~~~~l~~e~~~~~~~~~~~~p~~ 129 (736)
+.||+|+|+|++++.||+++.|+|+||||++|.+|+|++||+|||+|++++|+++++||++|++||++|+++++.|+|.+
T Consensus 4 p~pP~a~k~~~~~~~hg~~~~D~Y~WlRd~~~~~p~vl~yL~aEN~Yt~~~~a~~~~L~~~if~Ei~~Rik~dd~Svp~~ 83 (682)
T COG1770 4 PLPPIAKKVPTTRTHHGDTRVDDYAWLRDDNWSNPEVLAYLEAENAYTEAVMAHLQPLQKKIFEEIKGRIKEDDLSVPYR 83 (682)
T ss_pred CCCCCccccceeeeecCceeecchHhhhCCcccChHHHHHHHHhhHHHHHhhhhhHHHHHHHHHHHhhhccCcCCCCccc
Confidence 45899999999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred eCCEEEEEEecCCCeeEEEEEEeccCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEE
Q 004690 130 QGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAE 209 (736)
Q Consensus 130 ~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~ 209 (736)
.|+|+||.|...|++|+++||+...++ .+||+|||+|++++++.|++++.+++|||++++||+.
T Consensus 84 ~~~~~Yy~r~~~g~~y~~~~R~~~~g~----------------~~eevlLD~n~~A~g~~f~~Lg~~~~s~D~~~la~s~ 147 (682)
T COG1770 84 KGPYEYYSRTEEGKEYPIYCRQPDEGG----------------EGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYSV 147 (682)
T ss_pred cCCeeEEEEecCCCcceeEEeccCCCC----------------CceeEeecchhccCcccceeeeeeeeCCCCceEEEEE
Confidence 999999999999999999999654322 2689999999999999999999999999999999999
Q ss_pred eCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEE
Q 004690 210 DTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSL 288 (736)
Q Consensus 210 ~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~ 288 (736)
|..|+|.++|+++|+++|+.+.+.+.++..+++|.+|+ ++||++.++..+|.+||+|.++++...+++||++.++.|++
T Consensus 148 D~~G~e~y~lr~kdL~tg~~~~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~ 227 (682)
T COG1770 148 DVLGDEQYTLRFKDLATGEELPDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFL 227 (682)
T ss_pred ecccccEEEEEEEecccccccchhhcccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEE
Confidence 99999999999999999999988888888889999999 89999999999999999999999888899999999999999
Q ss_pred EEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004690 289 GLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (736)
Q Consensus 289 ~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~ 367 (736)
++..|.+.+||++..++..++++++++.+.++ .++++.++..+++|..+|.|+++|+.+|.+| .+++|+..++ .+..
T Consensus 228 ~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~~eh~~d~f~i~sN~~g-knf~l~~ap~-~~~~ 305 (682)
T COG1770 228 SVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGVEYSVEHGGDRFYILSNADG-KNFKLVRAPV-SADK 305 (682)
T ss_pred EeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCcEEeeeecCcEEEEEecCCC-cceEEEEccC-CCCh
Confidence 99999999999999999999999999999877 6788999999999999999999999999995 8999999998 4445
Q ss_pred eee--EecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccC-CCCcccCcceE
Q 004690 368 TTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID-PSESVFSSRIL 444 (736)
Q Consensus 368 ~~~--l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~-~~~~~~~~~~~ 444 (736)
..| +|+++++..++++..+++++++.++++|.+++++.+..+++ ...|.|+++.++.. ..+..++++.+
T Consensus 306 ~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~--------~~~i~f~~~ay~~~l~~~~e~~s~~l 377 (682)
T COG1770 306 SNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGE--------ERGIAFDDEAYSAGLSGNPEFDSDRL 377 (682)
T ss_pred hcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCCc--------eeeEEecchhhhccccCCCCCCCccE
Confidence 555 99999999999999999999999999999999999886433 25589999988864 67888999999
Q ss_pred EEEeccCCCCcEEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecC
Q 004690 445 RFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYG 524 (736)
Q Consensus 445 ~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hG 524 (736)
++.|+|+++|.++|.||+.+++.++++.++++++|++++|++++++++..||++||+++++.++. +.+++.|+||++||
T Consensus 378 R~~ysS~ttP~~~~~~dm~t~er~~LkqqeV~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~-~~~g~~p~lLygYG 456 (682)
T COG1770 378 RYSYSSMTTPATLFDYDMATGERTLLKQQEVPGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDT-KLDGSAPLLLYGYG 456 (682)
T ss_pred EEEeecccccceeEEeeccCCcEEEEEeccCCCCCChhHeEEEEEEEEcCCCcEeeEEEEEeccc-CCCCCCcEEEEEec
Confidence 99999999999999999999999999999998889999999999999999999999999999997 78899999999999
Q ss_pred CCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeCh
Q 004690 525 SYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSA 604 (736)
Q Consensus 525 g~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~ 604 (736)
+||.++.+.|+..+..|++||++++++|+||||+.|+.||++|+..+|+|+|+||++|+++|++++++++++|+++|+|+
T Consensus 457 aYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSA 536 (682)
T COG1770 457 AYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSA 536 (682)
T ss_pred cccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCcccccc----------------------ccccccccEEEee
Q 004690 605 GGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE----------------------VKAQNYPHILVTA 662 (736)
Q Consensus 605 GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~----------------------i~~~~~ppvLi~~ 662 (736)
||+|++++++++|++|+++|+.+||+|++++|+++++|++..||. +.+..|||+|++.
T Consensus 537 GGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~ 616 (682)
T COG1770 537 GGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTT 616 (682)
T ss_pred hhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEc
Confidence 999999999999999999999999999999999999999987765 5566899999999
Q ss_pred cCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcCC
Q 004690 663 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 727 (736)
Q Consensus 663 G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~~ 727 (736)
|.+|++|.+|++.||+++|++.+.+..++++++++++||++.+++++.+++.|..++|+.+.++.
T Consensus 617 Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A~eYaF~l~~~~~ 681 (682)
T COG1770 617 GLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIAFEYAFLLKLAGT 681 (682)
T ss_pred cccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHHHHHHHHhhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999988764
No 2
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=6.9e-101 Score=875.33 Aligned_cols=653 Identities=40% Similarity=0.679 Sum_probs=571.0
Q ss_pred CCCCcccceEEeecCCeeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHccccccCcCCcEEeC
Q 004690 52 PPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQG 131 (736)
Q Consensus 52 ~P~~~~~~~~~~~hG~~~~Dpy~wLed~~~~~~~v~~~l~~en~~~~~~l~~~~~~~~~l~~e~~~~~~~~~~~~p~~~g 131 (736)
||.|+++|+++++||+++.|||+||||.+|++|+|++||++||+||+++|++++++|++|++||+++++.+++++|.++|
T Consensus 2 pP~a~~~~~~~~~hg~~~~DpY~WLed~~r~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g 81 (686)
T PRK10115 2 LPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLHQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKN 81 (686)
T ss_pred cCCCCCCCeeEEeCCCEeccCchHhhCCCCCCHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcccccCCCCEEEC
Confidence 78899999999999999999999999976679999999999999999999998899999999999999999999999999
Q ss_pred CEEEEEEecCCCeeEEEEEEeccCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeC
Q 004690 132 SYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDT 211 (736)
Q Consensus 132 ~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~ 211 (736)
+|+||.|+..|+++++|||+..... ..+.||+|||+|+++++++++.++.+.|||||++|||+.+.
T Consensus 82 ~~~y~~~~~~g~~~~~~~r~~~~~~--------------~~~~~~~llD~n~~a~~~~~~~l~~~~~Spdg~~la~~~d~ 147 (686)
T PRK10115 82 GYRYRHIYEPGCEYAIYQRQSAFSE--------------EWDEWETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDF 147 (686)
T ss_pred CEEEEEEEcCCCccEEEEEecCCCC--------------CCCCCEEEEcchhhccCCCcEEEeEEEECCCCCEEEEEecC
Confidence 9999999999999999999764211 11358999999999888899999999999999999999999
Q ss_pred CCCcEEEEEEEECCCCCeecccccCccceeEEeeCC-eEEEEEeCCC-CCCceEEEEEcCCCCCCcEEEEeecCCceEEE
Q 004690 212 KGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEI-LRPDKAWLHKLEADQSNDICLYHEKDDIYSLG 289 (736)
Q Consensus 212 ~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~-~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~ 289 (736)
+|+|+++|+++|+++|+.+...++++...++|++|+ .|+|++.++. .++++||+|+++++++++++|+++.+..+.+.
T Consensus 148 ~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~ 227 (686)
T PRK10115 148 LSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVS 227 (686)
T ss_pred CCcEEEEEEEEECCCCCCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEE
Confidence 999999999999999987666666665669999999 8999998653 58899999999999888999999887777777
Q ss_pred EEEcCCccEEEEEecCcceeEEEEEeCC--CCCceEEeeccccceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004690 290 LQASESKKFLFIASESKITRFVFYLDVS--KPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (736)
Q Consensus 290 ~~~S~Dg~~l~~~~~~~~~~~l~~~dl~--~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~ 367 (736)
...+.|++++++.+.+..++++++++++ +++ ++++.++..+..+.+.+.++.||+.+|.+ +++++|+.+++.+++.
T Consensus 228 ~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ly~~tn~~-~~~~~l~~~~~~~~~~ 305 (686)
T PRK10115 228 LHKTTSKHYVVIHLASATTSEVLLLDAELADAE-PFVFLPRRKDHEYSLDHYQHRFYLRSNRH-GKNFGLYRTRVRDEQQ 305 (686)
T ss_pred EEEcCCCCEEEEEEECCccccEEEEECcCCCCC-ceEEEECCCCCEEEEEeCCCEEEEEEcCC-CCCceEEEecCCCccc
Confidence 7778899999988888888888988853 343 66677777777887778889999999987 7899999999875444
Q ss_pred eeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccc-cCCCCcccCcceEEE
Q 004690 368 TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS-IDPSESVFSSRILRF 446 (736)
Q Consensus 368 ~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~-v~~~~~~~~~~~~~~ 446 (736)
.+.++++.++..++++.++++++++..++++.+++++++++ ++.+ ..+.++++.+. ..+.+.+++++.+++
T Consensus 306 ~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~--~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 377 (686)
T PRK10115 306 WEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRK--TREV------IGIAFDDPAYVTWIAYNPEPETSRLRY 377 (686)
T ss_pred CeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCC--CCce------EEecCCCCceEeeecccCCCCCceEEE
Confidence 45588887777899999999999999999999999988765 3222 33444433332 223445567789999
Q ss_pred EeccCCCCcEEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCC
Q 004690 447 HYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (736)
Q Consensus 447 ~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~ 526 (736)
+++|+++|+++|.+|+.+++.++++.... +.|++..+.++++++++.||++||++++++++. ..+++.|+||++||||
T Consensus 378 ~~ss~~~P~~~y~~d~~~~~~~~l~~~~~-~~~~~~~~~~e~v~~~s~DG~~Ip~~l~~~~~~-~~~~~~P~ll~~hGg~ 455 (686)
T PRK10115 378 GYSSMTTPDTLFELDMDTGERRVLKQTEV-PGFDAANYRSEHLWITARDGVEVPVSLVYHRKH-FRKGHNPLLVYGYGSY 455 (686)
T ss_pred EEecCCCCCEEEEEECCCCcEEEEEecCC-CCcCccccEEEEEEEECCCCCEEEEEEEEECCC-CCCCCCCEEEEEECCC
Confidence 99999999999999999887666554333 458888899999999999999999999998875 4567789999999999
Q ss_pred CcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHH
Q 004690 527 EICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGG 606 (736)
Q Consensus 527 ~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG 606 (736)
+.+..+.|+...+.|+++||+|+++|+||+||+|+.|+++++..+|.++++|+++|++||++++++|++||+++|.|+||
T Consensus 456 ~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG 535 (686)
T PRK10115 456 GASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGG 535 (686)
T ss_pred CCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCcccc---cc-------------------ccccccccEEEeecC
Q 004690 607 LLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAE---WE-------------------VKAQNYPHILVTAGL 664 (736)
Q Consensus 607 ~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~---~~-------------------i~~~~~ppvLi~~G~ 664 (736)
+|++++++++|++|+|+|+.+|++|+.++|.+..+|+...+ |. +.++.+|++||+||.
T Consensus 536 ~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~ 615 (686)
T PRK10115 536 MLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGL 615 (686)
T ss_pred HHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecC
Confidence 99999999999999999999999999999877666654322 21 444578889999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcCCCCC
Q 004690 665 NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 730 (736)
Q Consensus 665 ~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~~~~~ 730 (736)
+|+|||++|+.||+++|++.+++.+++++++++++||++..++...+++.|++++||.++++....
T Consensus 616 ~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~~~ 681 (686)
T PRK10115 616 HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGTLP 681 (686)
T ss_pred CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCcCC
Confidence 999999999999999999999999999999999999999899999999999999999999987643
No 3
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-100 Score=799.39 Aligned_cols=662 Identities=41% Similarity=0.661 Sum_probs=563.6
Q ss_pred CCCCCCCcc-cceEEeecCCeeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHccccccCcCCc
Q 004690 49 LPSPPVAKK-VEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAP 127 (736)
Q Consensus 49 ~~~~P~~~~-~~~~~~~hG~~~~Dpy~wLed~~~~~~~v~~~l~~en~~~~~~l~~~~~~~~~l~~e~~~~~~~~~~~~p 127 (736)
+..||+++| +++.+.+||++|.|||+||||++ +.++.+|+++||.||+++|+++...+ +|+.||+.|++.+.+++|
T Consensus 3 ~~~~P~~~k~e~~~~~~hg~~v~Dpy~Wl~d~d--~~~~~~fv~~en~~t~~vl~~~e~~~-kl~~em~~~i~ye~~~~p 79 (712)
T KOG2237|consen 3 PLQYPVARKDESVAEDFHGVTVEDPYRWLEDPD--DTEMKEFVEAENKYTDAVLEDTETKE-KLFSEMTKRIDYEIITPP 79 (712)
T ss_pred CCCCCCcccccchhhhcCCceecCcchhhcCCc--HHHHHHHHHHhhhhhHHHHhccHHHH-HHHHHhhhccCccccCCc
Confidence 344666665 67788899999999999999999 99999999999999999999996666 999999999999999999
Q ss_pred EEeCCEEEEEEecCCCeeEEEEEEeccCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCeEEEeeEEECCCCCEEEE
Q 004690 128 FRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAY 207 (736)
Q Consensus 128 ~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~ 207 (736)
.|+|+|+||.++.++++|++||||....++ +.+. ++.......+|+||.|++++..+|+..+-.+.|||.++|||
T Consensus 80 ~r~G~~yyY~~n~~lkq~vl~~rr~~~~e~--~~~l---d~~~~~dd~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~ 154 (712)
T KOG2237|consen 80 LRWGPWYYYFYNTGLKQYVLYCRRLLEKEE--EVFL---DPNALGDDGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAY 154 (712)
T ss_pred cccCCEEEEEEcCCceehhHHHHhhhhccc--ceec---CCccCCCCceEEechhhhhhcCCceEEeecccCCCceEEEE
Confidence 999999999999999999999998763321 1222 22222345679999999999889999999999999999999
Q ss_pred EEeCCCCcEEEEEEEECCCCCeecccccCccceeEEee-CC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCc
Q 004690 208 AEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAG-NE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDI 285 (736)
Q Consensus 208 ~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~Wsp-Dg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~ 285 (736)
..+..|+|.+++ |.++...++.........+..+|.. || .|+|.+.++.+++++||+|.+|+.+.+|++++++.++.
T Consensus 155 ~~~~~~~e~~~~-v~~~~~~~~~~~~~~~g~~y~~w~~~dg~~l~~~t~~~~~r~hkvy~h~~Gtdq~~Dvl~~~e~d~~ 233 (712)
T KOG2237|consen 155 TKDTEGKELFTV-VIDVKFSGPVWTHDGKGVSYLAWAKQDGEDLLYGTEDENNRPHKVYYHTLGTDQSEDVLLYEEKDEP 233 (712)
T ss_pred EEcCCCCcccee-eeeeccCCceeeccCCceEeeeecccCCceeeeeeeccccCcceEEEEecccCCCcceEEEecCCCC
Confidence 999999999999 9999988876543333345589988 78 79999999999999999999999999999999999988
Q ss_pred eEEEEEEcCCccEEEEEecCcc---eeEEEEEeCCCCC-ceEE-eeccccceeEE------EeeeCCEEEEEEcCCCCCC
Q 004690 286 YSLGLQASESKKFLFIASESKI---TRFVFYLDVSKPE-ELRV-LTPRVVGVDTA------ASHRGNHFFITRRSDELFN 354 (736)
Q Consensus 286 ~~~~~~~S~Dg~~l~~~~~~~~---~~~l~~~dl~~~~-~~~~-l~~~~~~~~~~------~s~dg~~l~~~t~~~~~~~ 354 (736)
+.+...-..|+++..|.+.+.+ .+.+|.+|+..+. .++. +.++..++.+. +..++..++|.+|.+ +++
T Consensus 234 ~~vf~~~~kD~~~~~i~si~~t~s~~~~vf~~d~~~~~~gl~~~~~~~v~~v~~f~eh~~fi~~~~t~~~~~tn~~-~p~ 312 (712)
T KOG2237|consen 234 KHVFISETKDSGFYTINSISETCSPVNKVFLCDLSSPSDGLELLILPRVKGVDCFVEHYDFITNEGTEFYFLTNKD-APN 312 (712)
T ss_pred eEEEEEEEecCceEEEEEeeccCCccceEEEEecccccCCcchheeeccchhhhhhhhhhheeccCcceeeeccCC-CCc
Confidence 8777777777777777765544 4599999998765 4553 67777776543 444568899999998 899
Q ss_pred cEEEEEeCCCCCceee--EecCCCCceeeeEEEeCCEEEEEEEeCCeeEE-EEEEcCCCCCccccccCCceeeecCcccc
Q 004690 355 SELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKI-TTYRLPAVGEPLKSLQGGKSVEFIDPVYS 431 (736)
Q Consensus 355 ~~l~~~~~~~~~~~~~--l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l-~v~~l~~~g~~~~~l~~~~~i~~p~~~~~ 431 (736)
+.+.++++..+....| ++.+.+...+++++..++++++.........+ .+..+- .|. ....||.+.++
T Consensus 313 y~l~r~~~~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~~i~q~~~~l-~g~--------~~~~fpLpv~s 383 (712)
T KOG2237|consen 313 YYLLRIDVKEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLKHILQVRDLL-DGS--------LLRSFPLPVGS 383 (712)
T ss_pred eeEEeeeccCccccccceeecccchhhhhhhhhhcCceEEEEEecCchhhccccccc-cCc--------eeeeecCCCCc
Confidence 9999999988755566 78887777888998888766555544444333 222221 122 23457777778
Q ss_pred cCCCCcccCcceEEEEeccCCCCcEEEEEECCCCcEE--EEE-EeeecCCCCCCCceEEEEEEeCCCCeEEeEEEEEecC
Q 004690 432 IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV--LKK-IETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKN 508 (736)
Q Consensus 432 v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~~~~p~~ 508 (736)
+.+...++++++++|.++|+.+|+.+|+||+.+++.+ +.+ ...++++|+.+.|++++++++|.||++||++|++.++
T Consensus 384 v~~~~g~~~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~ 463 (712)
T KOG2237|consen 384 VSGTSGDFKSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVLPGFDASDYVVERIEVSSKDGTKVPMFIVYKKD 463 (712)
T ss_pred ccccccCCCCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccccCcccccceEEEEEEEecCCCCccceEEEEech
Confidence 7777778899999999999999999999999988532 222 3334578999999999999999999999999999888
Q ss_pred CccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHH
Q 004690 509 LVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (736)
Q Consensus 509 ~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (736)
. +.+++.|++|++||||+.+..+.|......|.++|++.+.+|+|||||+|..||+.|+..+|+|+|+||++|++||++
T Consensus 464 ~-k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve 542 (712)
T KOG2237|consen 464 I-KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVE 542 (712)
T ss_pred h-hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHH
Confidence 7 788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCcccccc-------------------
Q 004690 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE------------------- 649 (736)
Q Consensus 589 ~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~------------------- 649 (736)
+|++.|+++++.|+|+||+|++++++++|++|+|+|+.+||+|+++++.++.+|++..+|+
T Consensus 543 ~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~p 622 (712)
T KOG2237|consen 543 NGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSP 622 (712)
T ss_pred cCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChhhhhhhheecccCc
Confidence 9999999999999999999999999999999999999999999999999999999887766
Q ss_pred ---cccc-ccccEEEeecCCCCCCCChHHHHHHHHHHhcCCC----CCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHH
Q 004690 650 ---VKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD----DNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 721 (736)
Q Consensus 650 ---i~~~-~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl 721 (736)
+.+. .||.+||+++.+|+||+++++.||.++||.+... .+++++++++++||+...++...+++.|+.++||
T Consensus 623 v~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl 702 (712)
T KOG2237|consen 623 VDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFL 702 (712)
T ss_pred cCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHH
Confidence 3333 5999999999999999999999999999987533 3569999999999999999999999999999999
Q ss_pred HHhcCCCCC
Q 004690 722 MRALSMLPS 730 (736)
Q Consensus 722 ~~~l~~~~~ 730 (736)
.+.++..+.
T Consensus 703 ~K~~~~~~~ 711 (712)
T KOG2237|consen 703 AKMLNSDWI 711 (712)
T ss_pred HHHhcCccC
Confidence 999886653
No 4
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-76 Score=613.86 Aligned_cols=610 Identities=29% Similarity=0.391 Sum_probs=470.9
Q ss_pred eecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHccccccCcCCcEEeCCEEEEEEecCCCeeEEE
Q 004690 69 RVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQGSYYYYTRTLEGKEYVQH 148 (736)
Q Consensus 69 ~~Dpy~wLed~~~~~~~v~~~l~~en~~~~~~l~~~~~~~~~l~~e~~~~~~~~~~~~p~~~g~~~y~~~~~~g~~~~~~ 148 (736)
..|||+||||.+ ++|+++|+++||+-|..+|... +.++.+.+++.+.+..++.+.|.++|+++|+.+++ ..||..
T Consensus 2 ~~DPy~wlEd~~--~~eal~wv~~~N~~t~~~L~~~-~~~a~~~~~~~~l~d~~~~~~~~~~~~~~ynFw~D--~~~p~G 76 (648)
T COG1505 2 VPDPYRWLEDLD--SAEALKWVEAQNAKTREFLGED-SARAASDKRLLELWDYEDIPIPFERGGRYYNFWQD--ALYPRG 76 (648)
T ss_pred CCCcchhhhcCC--cHHHHHHHHhhhhHHHHHhhcc-hhhHHHHHHHHHHhhccccCcceeccceeEEeecc--ccCcce
Confidence 469999999988 9999999999999999999999 67778999999999988899999999999999998 566655
Q ss_pred EEEeccCCCCCCCccccCCCCCCCCCceEEeecchhcCCCC-eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCC
Q 004690 149 CRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRG-FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG 227 (736)
Q Consensus 149 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~-~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg 227 (736)
.+|+.. ...+. ...++++||+|++++++..| ....++.+.+||+++++|+.+.+|++...++++|++||
T Consensus 77 lwr~tt-------l~syr---s~~p~WevLiD~d~Ls~~~g~~v~~~Gas~~~~~~R~l~s~S~gG~D~~~~re~Dlet~ 146 (648)
T COG1505 77 LYRRTT-------LETYR---SAKPEWEVLIDVDALSADLGDKVALGGASVLPDGTRLLYSLSIGGSDAGITREFDLETG 146 (648)
T ss_pred eEEeec-------ceeec---ccCCCceeecCHHHHhhhcCCcEEEccceeCCCCCEEEEEecCCCCcceEEEEEEeccc
Confidence 444431 11121 34578999999999976443 55677778889999999999999999999999999999
Q ss_pred CeecccccCccceeEEeeCCeEEEEEeCC------CCCCc---eEEEEEcCCCCCCcEEEEeecCC-ceEEEEEEcCCcc
Q 004690 228 TPVGKPLVGVTASVEWAGNEALVYITMDE------ILRPD---KAWLHKLEADQSNDICLYHEKDD-IYSLGLQASESKK 297 (736)
Q Consensus 228 ~~~~~~~~~~~~~~~WspDg~l~y~~~~~------~~~~~---~v~~~~l~t~~~~~~~~~~~~~~-~~~~~~~~S~Dg~ 297 (736)
+.+... .-...++.|.++++++|.+... ++.+. .++++.+.+++.+++.+....+- .....+..+.|++
T Consensus 147 ~fv~~~-~f~~~~~~wld~d~~~~~~~~~~~e~T~sGy~~~~~~~krg~~f~~~~~dv~V~a~~~~~~~~~~~~~~~~~~ 225 (648)
T COG1505 147 EFVEEE-GFKFPGISWLDDDGVFVSRYWRPKEKTPSGYPRVVKRLKRGKLFEGQEGDVMVNARGDQDPWGFRLVLSEDGD 225 (648)
T ss_pred ccccCC-CccccceEEecCCCEEEecccCCcccCccCCchHhhhhhhcccccCCCCceEEecccccCCccceEEEeeccc
Confidence 887653 2223448999998777776532 23333 34566677777778887765421 1112333455555
Q ss_pred EEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEEEcCCCC----CCcEEEEEeCCC--CCceeeE
Q 004690 298 FLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDEL----FNSELLACPVDN--TSETTVL 371 (736)
Q Consensus 298 ~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~----~~~~l~~~~~~~--~~~~~~l 371 (736)
+.+... |+. +++++ ...+....+ +.+ .-++|++....++. ..+.|+....+. .+....+
T Consensus 226 ~f~~~~--------~~~-~~~~~-~~~l~~p~~-~~~----~~~~l~~~~r~dw~~~~~~~g~l~l~~~e~~~~g~~~a~ 290 (648)
T COG1505 226 FFMLSL--------WLG-TSGKG-LIKLGLPDK-VGY----EWGKLVNTLRADWTFADVDYGLLYLLTDEDLELGKVIAE 290 (648)
T ss_pred hhhhee--------eEe-ccCCC-ceeccCCcc-ccc----eeeeeeEeecccccccCcccceEEEEehhccccCceeEE
Confidence 443322 221 11111 111111100 111 11223332222211 112233222211 1122225
Q ss_pred ecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEEeccC
Q 004690 372 IPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSL 451 (736)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~ 451 (736)
+.+.+...++.+...++++++...+|...++.++... +.. .+++.+|.++ ++...+.+.+++.+.+.++|+
T Consensus 291 ~~P~~~~~le~v~tt~~~~va~~l~nv~~~l~v~~~~--g~~------~~~v~l~~~g-a~~~~~~~~~g~ev~l~~t~F 361 (648)
T COG1505 291 FIPEEEQSLEQVVTTKDKLVAGTLDNVSGRLEVYDLK--GER------IEEVELPPPG-ALGMGSADKDGDEVFLAFTSF 361 (648)
T ss_pred ecCCcccceeeeEEEcCeEEeeeehhccceEEEeccC--ceE------eeecccCCcc-ceeeccCCCCCcEEEEEeecc
Confidence 6666677899999999999999999999999998876 332 2567777654 444446677889999999999
Q ss_pred CCCcEEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCC
Q 004690 452 RTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND 531 (736)
Q Consensus 452 ~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~ 531 (736)
++|+++|++++.+++.++++.++ ..|+++.|.+++.+.+|.||++||+++++ ++. +.+ +.|++|+.||||+.+..
T Consensus 362 ~tP~~~~r~~~~~~eLe~ik~~p--~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~-~~d-~~pTll~aYGGF~vslt 436 (648)
T COG1505 362 TTPSTLYRLDLFGGELEVIREQP--VQFDADNYEVEQFFATSKDGTRIPYFIVR-KGA-KKD-ENPTLLYAYGGFNISLT 436 (648)
T ss_pred cCCCceEEEecCCceehhhhhcc--CCcCccCceEEEEEEEcCCCccccEEEEe-cCC-cCC-CCceEEEeccccccccC
Confidence 99999999999988876665444 48999999999999999999999999999 886 566 89999999999999999
Q ss_pred CCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 004690 532 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 611 (736)
Q Consensus 532 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~ 611 (736)
|.|++....|+++|.+++++|+||+||+|..||+++++.++++.|+||+|+++.|+++|++.|++|+|.|+|+||+|+++
T Consensus 437 P~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~ 516 (648)
T COG1505 437 PRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGA 516 (648)
T ss_pred CccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCceeEEEEcCCccchhhhcc---------CCCCCCcccccc----------ccc-cccccEEEeecCCCCCCCC
Q 004690 612 VLNMRPDLFKAAVAAVPFVDVLTTML---------DPTIPLTTAEWE----------VKA-QNYPHILVTAGLNDPRVMY 671 (736)
Q Consensus 612 ~~~~~p~~~~a~v~~~p~~d~~~~~~---------~~~~p~~~~~~~----------i~~-~~~ppvLi~~G~~D~~Vp~ 671 (736)
+++|+|++|.|+|+.+|++||+++.. +.+.|..+.++. +++ ..|||+||.+|.+|+||.|
T Consensus 517 alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHP 596 (648)
T COG1505 517 ALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHP 596 (648)
T ss_pred eeccChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccc
Confidence 99999999999999999999998743 222232223222 555 3899999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcC
Q 004690 672 SEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 726 (736)
Q Consensus 672 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~ 726 (736)
+|++||+++|++.+.+ ++|.++.++||++..+..+.+++.++.++||.++|+
T Consensus 597 aHarKfaa~L~e~~~p---v~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 597 AHARKFAAKLQEVGAP---VLLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred hHHHHHHHHHHhcCCc---eEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999954 478888899999999988889999999999999885
No 5
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=100.00 E-value=2.4e-58 Score=505.97 Aligned_cols=396 Identities=37% Similarity=0.623 Sum_probs=327.5
Q ss_pred CCCCcccceEEeecCCeeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHccccccCcCCcEEeC
Q 004690 52 PPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQG 131 (736)
Q Consensus 52 ~P~~~~~~~~~~~hG~~~~Dpy~wLed~~~~~~~v~~~l~~en~~~~~~l~~~~~~~~~l~~e~~~~~~~~~~~~p~~~g 131 (736)
||++++.++++++||+++.|||+||||.+ +|+|++||++||+||+++|+++++++++|++||++++..+..++|.+.|
T Consensus 1 P~~~~~~~~~~~~hg~~~~DpY~WLed~~--~~~v~~~~~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g 78 (414)
T PF02897_consen 1 PPTARKPPVVETLHGVTITDPYRWLEDDD--SPEVLAWLKAENAYTEAYLAQLKPLREKLYEELKARINEDRESVPVRRG 78 (414)
T ss_dssp S-TTS-TTSEEEETTEEEE-TTGGGGSTT--SHHHHHHHHHHHHHHHHHHHTSHTCHHHHHHHHHHHCSSSEE---EEET
T ss_pred CCCCCCCCeeeecCCCEeecCchhhcCCC--CHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHhhccCCCccccEEEC
Confidence 56677777999999999999999999988 9999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEecCCCeeEEEEEEeccCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeC
Q 004690 132 SYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDT 211 (736)
Q Consensus 132 ~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~ 211 (736)
+|+||.++.++++++++||+..... ....||+|||+|+++++.+++.++.+.+||||++|||+++.
T Consensus 79 ~~~y~~~~~~~~~~~~~~r~~~~~~--------------~~~~~evllD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~ 144 (414)
T PF02897_consen 79 GYYYYSRNQGGKNYPVLYRRKTDEE--------------DGPEEEVLLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSD 144 (414)
T ss_dssp TEEEEEEE-SS-SS-EEEEEETTS---------------TS-C-EEEEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEE
T ss_pred CeEEEEEEcCCCceEEEEEEecccC--------------CCCceEEEEcchHhhccCceEEeeeeeECCCCCEEEEEecC
Confidence 9999999999999999999876410 11246999999999986668888999999999999999999
Q ss_pred CCCcEEEEEEEECCCCCeecccccCccce-eEEeeCC-eEEEEEeCCCCC------CceEEEEEcCCCCCCcEEEEeecC
Q 004690 212 KGDEIYTVYVIDIETGTPVGKPLVGVTAS-VEWAGNE-ALVYITMDEILR------PDKAWLHKLEADQSNDICLYHEKD 283 (736)
Q Consensus 212 ~G~e~~~l~v~dl~tg~~~~~~~~~~~~~-~~WspDg-~l~y~~~~~~~~------~~~v~~~~l~t~~~~~~~~~~~~~ 283 (736)
+|+|.++|+++|+++|+.+.+.+.+.... ++|++|| .|+|++.++..+ +++||+|++|+++.++++||++.+
T Consensus 145 ~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~ 224 (414)
T PF02897_consen 145 GGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPD 224 (414)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TT
T ss_pred CCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecC
Confidence 99999999999999999888776666443 9999999 899999987666 999999999999988899999998
Q ss_pred Cce-EEEEEEcCCccEEEEEecCcce-eEEEEEeCCCC---C-ceEEeeccccceeEEEeeeCCEEEEEEcCCCCCCcEE
Q 004690 284 DIY-SLGLQASESKKFLFIASESKIT-RFVFYLDVSKP---E-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSEL 357 (736)
Q Consensus 284 ~~~-~~~~~~S~Dg~~l~~~~~~~~~-~~l~~~dl~~~---~-~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~~l 357 (736)
..+ ++++.+|+||++|++.+.+... +++|++++.++ . .++++.++..+..+.+.+.|+.||+.+|.+ +++++|
T Consensus 225 ~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~-a~~~~l 303 (414)
T PF02897_consen 225 EPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDD-APNGRL 303 (414)
T ss_dssp CTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT--TT-EE
T ss_pred CCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCC-CCCcEE
Confidence 887 8899999999999999988777 99999999985 2 588899988888888888999999999987 899999
Q ss_pred EEEeCCCCCce--e-eEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCC
Q 004690 358 LACPVDNTSET--T-VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 434 (736)
Q Consensus 358 ~~~~~~~~~~~--~-~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~ 434 (736)
++++++.+... . .++++.++..+.++..++++|++..++++.++|.++++.. +.. ...+.+|..+ ++.+
T Consensus 304 ~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~-~~~------~~~~~~p~~g-~v~~ 375 (414)
T PF02897_consen 304 VAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDD-GKE------SREIPLPEAG-SVSG 375 (414)
T ss_dssp EEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT--TEE------EEEEESSSSS-EEEE
T ss_pred EEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCC-CcE------EeeecCCcce-EEec
Confidence 99999986542 2 3777777889999999999999999999999999999871 221 2345555433 4556
Q ss_pred CCcccCcceEEEEeccCCCCcEEEEEECCCCcEEEEEE
Q 004690 435 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKI 472 (736)
Q Consensus 435 ~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~ 472 (736)
.+.+++++.++|+++|+++|+++|.||+.+++.++++.
T Consensus 376 ~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~~k~ 413 (414)
T PF02897_consen 376 VSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTLLKQ 413 (414)
T ss_dssp EES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEEEEe
Confidence 67788999999999999999999999999999877664
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-39 Score=367.94 Aligned_cols=507 Identities=19% Similarity=0.218 Sum_probs=332.4
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCC-eEEEEEeCC----CCC----CceE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDE----ILR----PDKA 263 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg-~l~y~~~~~----~~~----~~~v 263 (736)
+..+.|||||+.+++.... |....++|+.+.. | ... ......+...|+|+| .+.+..... ... ..++
T Consensus 62 ~~~~~~spdg~~~~~~~~~-~~~~~~l~l~~~~-g-~~~-~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (620)
T COG1506 62 VSELRWSPDGSVLAFVSTD-GGRVAQLYLVDVG-G-LIT-KTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRL 137 (620)
T ss_pred ccccccCCCCCEEEEEecc-CCCcceEEEEecC-C-cee-eeecccccceeCCCCCeEEEEecccccccCCceeeeeccc
Confidence 4567899999999999844 3347899999998 5 222 122224558999999 777732211 010 0111
Q ss_pred EEEEcCCC-CCCcEEEEeec--------CCceEEEEEEcCCccEEEEEecCcc----eeEEEEEeCCCCCceEEeecccc
Q 004690 264 WLHKLEAD-QSNDICLYHEK--------DDIYSLGLQASESKKFLFIASESKI----TRFVFYLDVSKPEELRVLTPRVV 330 (736)
Q Consensus 264 ~~~~l~t~-~~~~~~~~~~~--------~~~~~~~~~~S~Dg~~l~~~~~~~~----~~~l~~~dl~~~~~~~~l~~~~~ 330 (736)
..+..+.+ ......+.+.. ...-.....+..+++.++....... ....++....++. +..+++...
T Consensus 138 ~~~~~~~g~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (620)
T COG1506 138 PVWFDGRGGERSDLYVVDIESKLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGE-LESLTPGEG 216 (620)
T ss_pred ceeecCCCCcccceEEEccCcccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCc-eEEEcCCCc
Confidence 11111221 11111122111 1111234555666676665543322 2233333334444 566666544
Q ss_pred cee-EEEeeeCCEEEEEEcCCC---CCCcEEEEEeCCCCCceeeEecCCC----CceeeeEEEeCCEEEEEEEe-CCeeE
Q 004690 331 GVD-TAASHRGNHFFITRRSDE---LFNSELLACPVDNTSETTVLIPHRE----SVKLQDIQLFIDHLAVYERE-GGLQK 401 (736)
Q Consensus 331 ~~~-~~~s~dg~~l~~~t~~~~---~~~~~l~~~~~~~~~~~~~l~~~~~----~~~i~~~~~~~~~l~~~~~~-~g~~~ 401 (736)
... ..+.++|+.+++..+... .....++..+.+...... ...... ...+... ..++.+++...+ .+.
T Consensus 217 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~-- 292 (620)
T COG1506 217 SISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDG-DLSSGDDTRGAWAVEGG-LDGDGLLFIATDGGGS-- 292 (620)
T ss_pred eeeeeeeCCCCCeeEEeccCCccCccccceEEEEeccccccce-eeccCCcccCcHHhccc-cCCCcEEEEEecCCCc--
Confidence 433 458889998888877642 223345554411111111 111110 0011111 445566666665 333
Q ss_pred EEEEEcCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCcEEEEEEeeecCCC-C
Q 004690 402 ITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGF-D 480 (736)
Q Consensus 402 l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~-~ 480 (736)
..++.....+. ...+. ..+...+..+. .+++.+.+.++++..|+++|.++. ..+.+++.... ... .
T Consensus 293 ~~l~~~~~~~~-------~~~~~-~~~~~~v~~f~--~~~~~~~~~~s~~~~p~~i~~~~~-~~~~~~~~~~~--~~~~~ 359 (620)
T COG1506 293 SPLFRVDDLGG-------GVEGL-SGDDGGVPGFD--VDGRKLALAYSSPTEPPEIYLYDR-GEEAKLTSSNN--SGLKK 359 (620)
T ss_pred eEEEEEeccCC-------ceeee-cCCCceEEEEe--eCCCEEEEEecCCCCccceEEEcC-CCceEEeeccc--ccccc
Confidence 33343332121 01111 11212233333 378899999999999999999987 33333332211 111 1
Q ss_pred CCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCC
Q 004690 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 560 (736)
Q Consensus 481 ~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g 560 (736)
......+.+++++.||.+|+++++.|++. .+.+++|+||++|||+.......|....+.|+.+||+|+.+|+||++++|
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~-~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG 438 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGF-DPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYG 438 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCC-CCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccH
Confidence 23446799999999999999999999998 66677999999999998877788999999999999999999999999999
Q ss_pred hhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCC
Q 004690 561 RQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT 640 (736)
Q Consensus 561 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~ 640 (736)
+.|.++.....+...++|+++++++|.+.+.+|++||+|+|+|+||+|+++++++.| +|+|+++.++.++...++....
T Consensus 439 ~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~ 517 (620)
T COG1506 439 REFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGEST 517 (620)
T ss_pred HHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccc
Confidence 999999999999999999999999999999999999999999999999999999988 8999999999888765543222
Q ss_pred CCC-------------cccccc-cc-----ccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCc
Q 004690 641 IPL-------------TTAEWE-VK-----AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 701 (736)
Q Consensus 641 ~p~-------------~~~~~~-i~-----~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH 701 (736)
.++ ....|. .+ .....|+||+||++|.+||.+|+.+|+++|+..|+++++++|+ ++||
T Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p---~e~H 594 (620)
T COG1506 518 EGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP---DEGH 594 (620)
T ss_pred hhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC---CCCc
Confidence 111 011121 11 1256679999999999999999999999999999999888886 9999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhcCC
Q 004690 702 FSKSGRFERLREAAFTYTFLMRALSM 727 (736)
Q Consensus 702 ~~~~~~~~~~~~~a~~~~fl~~~l~~ 727 (736)
.+... .........+++||+++++.
T Consensus 595 ~~~~~-~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 595 GFSRP-ENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCCc-hhHHHHHHHHHHHHHHHhcC
Confidence 98763 23444555689999999874
No 7
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.96 E-value=3.3e-29 Score=249.12 Aligned_cols=192 Identities=29% Similarity=0.424 Sum_probs=155.5
Q ss_pred CCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 004690 532 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 611 (736)
Q Consensus 532 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~ 611 (736)
|+|+...+.|+++||+|+.+|+||++++|..|++.+....+...++|+++++++|++++.+|++||+|+|+|+||++++.
T Consensus 1 ~~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 1 PSFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp ---SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred CeeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 45777888999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred HHHhCCCceeEEEEcCCccchhhhccCCCC-----------CC-cccccc----ccc--c--ccccEEEeecCCCCCCCC
Q 004690 612 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTI-----------PL-TTAEWE----VKA--Q--NYPHILVTAGLNDPRVMY 671 (736)
Q Consensus 612 ~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~-----------p~-~~~~~~----i~~--~--~~ppvLi~~G~~D~~Vp~ 671 (736)
++.++|++|+|+|+.+|++|+......... +. ....|. +.. . ..+|+||+||++|.+||+
T Consensus 81 ~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~ 160 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPP 160 (213)
T ss_dssp HHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTT
T ss_pred hhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCH
Confidence 999999999999999999998755432211 10 111111 221 1 578999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcCC
Q 004690 672 SEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 727 (736)
Q Consensus 672 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~~ 727 (736)
+++.+++++|++.++++++++++ ++||++....... +....+++||.++|+.
T Consensus 161 ~~s~~~~~~L~~~g~~~~~~~~p---~~gH~~~~~~~~~-~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 161 SQSLRLYNALRKAGKPVELLIFP---GEGHGFGNPENRR-DWYERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEET---T-SSSTTSHHHHH-HHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHhcCCCEEEEEcC---cCCCCCCCchhHH-HHHHHHHHHHHHHcCC
Confidence 99999999999999987776665 9999876655443 5677799999999974
No 8
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.5e-26 Score=242.05 Aligned_cols=319 Identities=19% Similarity=0.222 Sum_probs=232.8
Q ss_pred EEEEEEeCCe--eEEEEEEcCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCcE
Q 004690 390 LAVYEREGGL--QKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (736)
Q Consensus 390 l~~~~~~~g~--~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~ 467 (736)
+||....++. ..|++..+...|. ...+.+++++.. ...+.+-+.+...++|-..|+.+..|.+..++-
T Consensus 518 VYf~gt~d~PlE~hLyvvsye~~g~---------~~rlt~~g~sh~-~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~~ 587 (867)
T KOG2281|consen 518 VYFVGTKDTPLEHHLYVVSYENPGE---------IARLTEPGYSHS-CELDQQCDHFVSYYSSVGSPPCVSLYSLSWPEN 587 (867)
T ss_pred EEEEccCCCCceeeEEEEEEecCCc---------eeeccCCCcccc-hhhhhhhhhHhhhhhcCCCCceEEEEeccCCcc
Confidence 4555555553 3567777664343 222334454421 112223334777888999999999998877653
Q ss_pred EEEEEee----e--cCCCCCCCceE-EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCC-CCCch---
Q 004690 468 VLKKIET----V--LGGFDTNNYFT-ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNS--- 536 (736)
Q Consensus 468 ~~~~~~~----~--~~~~~~~~~~~-~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~-~~~~~--- 536 (736)
..+..+. + ...-.+.+|.. +-+.+.+..|..+.+.++.|.+. ++++++|+++++|||++...- ..|..
T Consensus 588 ~~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~-~pgkkYptvl~VYGGP~VQlVnnsfkgi~y 666 (867)
T KOG2281|consen 588 DPLPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNF-QPGKKYPTVLNVYGGPGVQLVNNSFKGIQY 666 (867)
T ss_pred CcccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccC-CCCCCCceEEEEcCCCceEEeeccccceeh
Confidence 2211111 0 11234456654 66778888899999999999888 888999999999999987642 23432
Q ss_pred -hHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcC-CCCCCcEEEEEeChHHHHHHHHHH
Q 004690 537 -SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 537 -~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
....|+.+||+|+.+|-||+-..|..|...-+...+...++|-+.++++|+++. ++|.+||+|.|+|+||+|++..++
T Consensus 667 lR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~ 746 (867)
T KOG2281|consen 667 LRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLA 746 (867)
T ss_pred hhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhh
Confidence 245899999999999999999999999888888888999999999999999884 999999999999999999999999
Q ss_pred hCCCceeEEEEcCCccchhhhcc-----CCCCCC-cccccc-------cccc-cccc-EEEeecCCCCCCCChHHHHHHH
Q 004690 615 MRPDLFKAAVAAVPFVDVLTTML-----DPTIPL-TTAEWE-------VKAQ-NYPH-ILVTAGLNDPRVMYSEPAKFVA 679 (736)
Q Consensus 615 ~~p~~~~a~v~~~p~~d~~~~~~-----~~~~p~-~~~~~~-------i~~~-~~pp-vLi~~G~~D~~Vp~~~~~~~~~ 679 (736)
++|+.|+++|+.+|++++.-+-. -.+.|. ....|. +.+. ..|. +|++||.-|.+|...|...++.
T Consensus 747 ~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs 826 (867)
T KOG2281|consen 747 QYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVS 826 (867)
T ss_pred cCcceeeEEeccCcceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHH
Confidence 99999999999999999853211 112331 122233 2222 2333 9999999999999999999999
Q ss_pred HHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHH
Q 004690 680 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 723 (736)
Q Consensus 680 ~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~ 723 (736)
+|.++|++.++++|+ +..|+...+.....-+ +.++.||.+
T Consensus 827 ~lvkagKpyeL~IfP---~ERHsiR~~es~~~yE-~rll~FlQ~ 866 (867)
T KOG2281|consen 827 ALVKAGKPYELQIFP---NERHSIRNPESGIYYE-ARLLHFLQE 866 (867)
T ss_pred HHHhCCCceEEEEcc---ccccccCCCccchhHH-HHHHHHHhh
Confidence 999999999888886 8999876554333323 457778764
No 9
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.1e-24 Score=249.77 Aligned_cols=329 Identities=17% Similarity=0.182 Sum_probs=223.0
Q ss_pred eCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCC
Q 004690 386 FIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 465 (736)
Q Consensus 386 ~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~ 465 (736)
+.+.+++.....+..+..++.+......+..++ .... ...+.+...+.+.....+.+..+.+..|...+..-....
T Consensus 398 ~~~~i~f~~~~~~~~~~~ly~i~~~~~~~~~lt-~~~~---~~~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~ 473 (755)
T KOG2100|consen 398 DSNRIYFDAYEEDPSERHLYSISLGSGTVESLT-CSLI---TGPCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKN 473 (755)
T ss_pred CCceEEEEecCCCCCceEEEEEEcccccccccc-ccCC---CCcceEEEEecCCcccEEEEEccCCCCCcceeecccccc
Confidence 345677777765444444554443232221111 0001 012222233444456677788888888854222111111
Q ss_pred cEEEEEEe--e----ecCCCCCCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCC-CC--ch
Q 004690 466 ISVLKKIE--T----VLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AF--NS 536 (736)
Q Consensus 466 ~~~~~~~~--~----~~~~~~~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~-~~--~~ 536 (736)
..+...+. + ....+.......+++.+ ||....+.++.|++. ...++.|+||..|||+++.... .| ..
T Consensus 474 ~~~~~~Le~n~~~~~~~~~~~~p~~~~~~i~~---~~~~~~~~~~lP~~~-~~~~kyPllv~~yGGP~sq~v~~~~~~~~ 549 (755)
T KOG2100|consen 474 SKTIVVLETNEELKKTIENVALPIVEFGKIEI---DGITANAILILPPNF-DPSKKYPLLVVVYGGPGSQSVTSKFSVDW 549 (755)
T ss_pred ceEEEEeccChhhHHHhhcccCCcceeEEEEe---ccEEEEEEEecCCCC-CCCCCCCEEEEecCCCCcceeeeeEEecH
Confidence 11111111 1 11122233334455555 888999999999998 7778999999999999843321 12 22
Q ss_pred hHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC
Q 004690 537 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 616 (736)
Q Consensus 537 ~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~ 616 (736)
....+..+|++|+.+|+||+|++|..+..+..+..+...++|.+.+++++.+++++|++||+|+|+|+||++++.++..+
T Consensus 550 ~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~ 629 (755)
T KOG2100|consen 550 NEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESD 629 (755)
T ss_pred HHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhC
Confidence 33456778999999999999999999988888888999999999999999999999999999999999999999999998
Q ss_pred C-CceeEEEEcCCccchhhhccC-----CCCCCccc-ccc-------ccccccccEEEeecCCCCCCCChHHHHHHHHHH
Q 004690 617 P-DLFKAAVAAVPFVDVLTTMLD-----PTIPLTTA-EWE-------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 682 (736)
Q Consensus 617 p-~~~~a~v~~~p~~d~~~~~~~-----~~~p~~~~-~~~-------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~ 682 (736)
| +.|+|+|+.+|++|+..+..- .+.|.... .|. +.....|-.|++||+.|++|+++|+.+++++|+
T Consensus 630 ~~~~fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~ 709 (755)
T KOG2100|consen 630 PGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQ 709 (755)
T ss_pred cCceEEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHH
Confidence 8 789999999999998721100 01111111 122 223355657999999999999999999999999
Q ss_pred hcCCCCCeEEEEecCCCCcCCCCCh--HHHHHHHHHHHHHHHHhcCCC
Q 004690 683 EMKTDDNILLFKCELGAGHFSKSGR--FERLREAAFTYTFLMRALSML 728 (736)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~a~~~~fl~~~l~~~ 728 (736)
.+|+++++++++ ++.|++.... ...+. .+..||..+++..
T Consensus 710 ~~gv~~~~~vyp---de~H~is~~~~~~~~~~---~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 710 NAGVPFRLLVYP---DENHGISYVEVISHLYE---KLDRFLRDCFGSP 751 (755)
T ss_pred HCCCceEEEEeC---CCCcccccccchHHHHH---HHHHHHHHHcCcc
Confidence 999998877776 9999987644 33333 3678998777644
No 10
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=3.2e-20 Score=187.75 Aligned_cols=201 Identities=16% Similarity=0.147 Sum_probs=144.6
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC-CCCChhhhh
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG-GELGRQWYE 565 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~-g~~g~~~~~ 565 (736)
..-.+.+.||.+|.+|+..|++. ...+.++||++||-.+ .. ..|...+..|+++||.|+.+|+||+ |+++..+.+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf~~-~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~ 85 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGFAR-RM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE 85 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCCCC-Ch-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc
Confidence 34457788999999998888753 2457789999999444 32 2377788899999999999999987 877776643
Q ss_pred ccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhcc---C----
Q 004690 566 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---D---- 638 (736)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~---~---- 638 (736)
..... ...|+.++++|+.+++ .++|+++|+||||.++..+|... .++++|+.+|+.++...+. .
T Consensus 86 ~t~s~----g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~~ 156 (307)
T PRK13604 86 FTMSI----GKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDYL 156 (307)
T ss_pred Ccccc----cHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcccc
Confidence 32211 2589999999998863 46899999999999987777643 3899999999998543221 0
Q ss_pred --C--CCC---------Ccccc---------cc--------ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCC
Q 004690 639 --P--TIP---------LTTAE---------WE--------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 688 (736)
Q Consensus 639 --~--~~p---------~~~~~---------~~--------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~ 688 (736)
+ ..| +.... +. ++. ...|+|++||.+|+.||+.++++++++++.. +.
T Consensus 157 ~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~-l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~--~k 233 (307)
T PRK13604 157 SLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKG-LDIPFIAFTANNDSWVKQSEVIDLLDSIRSE--QC 233 (307)
T ss_pred cCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhh-cCCCEEEEEcCCCCccCHHHHHHHHHHhccC--Cc
Confidence 0 000 00000 00 111 2367999999999999999999999987542 33
Q ss_pred CeEEEEecCCCCcCCCCC
Q 004690 689 NILLFKCELGAGHFSKSG 706 (736)
Q Consensus 689 ~~~~~~~~~~~gH~~~~~ 706 (736)
+++.+ +|++|.+..+
T Consensus 234 kl~~i---~Ga~H~l~~~ 248 (307)
T PRK13604 234 KLYSL---IGSSHDLGEN 248 (307)
T ss_pred EEEEe---CCCccccCcc
Confidence 44455 5999998765
No 11
>PRK10566 esterase; Provisional
Probab=99.83 E-value=2.4e-19 Score=182.90 Aligned_cols=216 Identities=19% Similarity=0.218 Sum_probs=140.1
Q ss_pred EeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccc---cccCcCh
Q 004690 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK---FLKKKNT 575 (736)
Q Consensus 499 i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~---~~~~~~~ 575 (736)
+....+.|.+. .+++.|+||++||..+.. ..|...+..|+++||.|+++|+||+|........... .......
T Consensus 12 ~~~~~~~p~~~--~~~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~ 87 (249)
T PRK10566 12 IEVLHAFPAGQ--RDTPLPTVFFYHGFTSSK--LVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQN 87 (249)
T ss_pred cceEEEcCCCC--CCCCCCEEEEeCCCCccc--chHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHH
Confidence 44455666542 235689999999965443 2366677889999999999999998753111000000 0001134
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEE-cCCccchh-hhccCCC---CCCcc-----
Q 004690 576 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA-AVPFVDVL-TTMLDPT---IPLTT----- 645 (736)
Q Consensus 576 ~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~-~~p~~d~~-~~~~~~~---~p~~~----- 645 (736)
.+|+.++++++.+++.+|+++|+++|+|+||++++.++.++|+..++++. ..+..... ..+..+. .+...
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNN 167 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHH
Confidence 67888999999998888999999999999999999999988875444332 23322211 1110000 00000
Q ss_pred -----cccc----ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHH
Q 004690 646 -----AEWE----VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAF 716 (736)
Q Consensus 646 -----~~~~----i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~ 716 (736)
..+. +......|+|++||++|..||+.++.+++++++.++.+.+ +.+..++++||.... . ....
T Consensus 168 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~-~~~~~~~~~~H~~~~---~---~~~~ 240 (249)
T PRK10566 168 IVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKN-LTCLWEPGVRHRITP---E---ALDA 240 (249)
T ss_pred HHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcc-eEEEecCCCCCccCH---H---HHHH
Confidence 0011 2222235799999999999999999999999998876532 233345699998642 2 3455
Q ss_pred HHHHHHHhc
Q 004690 717 TYTFLMRAL 725 (736)
Q Consensus 717 ~~~fl~~~l 725 (736)
+.+||.++|
T Consensus 241 ~~~fl~~~~ 249 (249)
T PRK10566 241 GVAFFRQHL 249 (249)
T ss_pred HHHHHHhhC
Confidence 789999875
No 12
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=3.9e-19 Score=189.24 Aligned_cols=239 Identities=14% Similarity=0.112 Sum_probs=159.7
Q ss_pred CCCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC
Q 004690 480 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL 559 (736)
Q Consensus 480 ~~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~ 559 (736)
.+.++..+...+.+.||.+|.+....|.+. ..+.|+||++||.... ....|......|+++||.|+++|+||+|.+
T Consensus 26 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~---~~~~~~VvllHG~~~~-~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 26 ALKGIKGSKSFFTSPRGLSLFTRSWLPSSS---SPPRALIFMVHGYGND-ISWTFQSTAIFLAQMGFACFALDLEGHGRS 101 (330)
T ss_pred hccCCccccceEEcCCCCEEEEEEEecCCC---CCCceEEEEEcCCCCC-cceehhHHHHHHHhCCCEEEEecCCCCCCC
Confidence 344555667778889999999877766542 2356899999996433 233455556678899999999999999976
Q ss_pred ChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhh----
Q 004690 560 GRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT---- 635 (736)
Q Consensus 560 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~---- 635 (736)
... .+....-....+|+.+++++|......+..+++++||||||.+++.++.++|++++++|+.+|+.++...
T Consensus 102 ~~~---~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (330)
T PLN02298 102 EGL---RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP 178 (330)
T ss_pred CCc---cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc
Confidence 431 0111111234688999999998754334457999999999999999999999999999999886542110
Q ss_pred ---------c---c-----CCCCCCc----------------ccccc---------------------ccccccccEEEe
Q 004690 636 ---------M---L-----DPTIPLT----------------TAEWE---------------------VKAQNYPHILVT 661 (736)
Q Consensus 636 ---------~---~-----~~~~p~~----------------~~~~~---------------------i~~~~~ppvLi~ 661 (736)
+ . .+..... ...|. +. ....|+||+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~PvLii 257 (330)
T PLN02298 179 WPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLK-DVSIPFIVL 257 (330)
T ss_pred hHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhh-hcCCCEEEE
Confidence 0 0 0000000 00000 11 134679999
Q ss_pred ecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHH-HH-HHHHHHHHHHHhcCCCCCC
Q 004690 662 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER-LR-EAAFTYTFLMRALSMLPSV 731 (736)
Q Consensus 662 ~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~-~~a~~~~fl~~~l~~~~~~ 731 (736)
||.+|..||+.+++++++++...+ .+++++ +++||.......+. .+ -...+.+||.++++....+
T Consensus 258 ~G~~D~ivp~~~~~~l~~~i~~~~--~~l~~~---~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 258 HGSADVVTDPDVSRALYEEAKSED--KTIKIY---DGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred ecCCCCCCCHHHHHHHHHHhccCC--ceEEEc---CCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999988876433 344555 48999865322221 11 2345789999998655444
No 13
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=3.1e-18 Score=170.67 Aligned_cols=216 Identities=18% Similarity=0.172 Sum_probs=161.8
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhh--
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY-- 564 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~-- 564 (736)
+.+.+++.| .++++++.+|++. ++.|+||++|+.+|... .....+..|+.+||+|++||+-+..+......
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~----~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGA----GGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcC----CCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 456788777 7899999999875 44499999999887643 57778889999999999999876433222111
Q ss_pred ----hcc--ccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccC
Q 004690 565 ----ENG--KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD 638 (736)
Q Consensus 565 ----~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~ 638 (736)
..+ ..........|+.++++||..++.++++||+++|+|+||.+++.++.+.| .++|+|+.+|..-......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~~- 153 (236)
T COG0412 76 PAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTAD- 153 (236)
T ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcccc-
Confidence 111 00111467899999999999999899999999999999999999999877 7899999998433111110
Q ss_pred CCCCCccccccccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCCh---------HH
Q 004690 639 PTIPLTTAEWEVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR---------FE 709 (736)
Q Consensus 639 ~~~p~~~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~---------~~ 709 (736)
......|+|+.+|..|+.+|.....++.+++.+++..+++.++ .++.|+|...+ ..
T Consensus 154 ------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y---~ga~H~F~~~~~~~~~~y~~~a 218 (236)
T COG0412 154 ------------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY---PGAGHGFANDRADYHPGYDAAA 218 (236)
T ss_pred ------------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe---CCCccccccCCCcccccCCHHH
Confidence 1123456999999999999999999999999998766655555 48889886331 22
Q ss_pred HHHHHHHHHHHHHHhcC
Q 004690 710 RLREAAFTYTFLMRALS 726 (736)
Q Consensus 710 ~~~~~a~~~~fl~~~l~ 726 (736)
.-..+.++++||.++++
T Consensus 219 a~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 219 AEDAWQRVLAFFKRLLG 235 (236)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 33346668899998875
No 14
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.80 E-value=2e-18 Score=187.23 Aligned_cols=219 Identities=15% Similarity=0.092 Sum_probs=148.3
Q ss_pred CceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChh
Q 004690 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (736)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 562 (736)
++..+.+.++..||..|+++++.|+. +++.|+||+.|| .+......|......|+++||+|+++|+||+|+...
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~----~~~~P~Vli~gG-~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~- 238 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG----DGPFPTVLVCGG-LDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK- 238 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC----CCCccEEEEeCC-cccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 34578999999899889999888863 257788876554 544333345556678999999999999999887543
Q ss_pred hhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchh-hh------
Q 004690 563 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-TT------ 635 (736)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~-~~------ 635 (736)
+. ..........+++++|.+...+|++||+++|+|+||++++.++..+|++++++|+..|+++.. ..
T Consensus 239 ~~------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~ 312 (414)
T PRK05077 239 WK------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ 312 (414)
T ss_pred CC------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh
Confidence 11 011112233578999999988999999999999999999999999899999999999876511 00
Q ss_pred --------ccC-CCCCC-ccc-------ccc------ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEE
Q 004690 636 --------MLD-PTIPL-TTA-------EWE------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 692 (736)
Q Consensus 636 --------~~~-~~~p~-~~~-------~~~------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~ 692 (736)
+.. ...+. ... .|. +......|+|++||++|++||+++++.+++... +.+++.
T Consensus 313 ~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~----~~~l~~ 388 (414)
T PRK05077 313 VPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA----DGKLLE 388 (414)
T ss_pred chHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC----CCeEEE
Confidence 000 00000 000 010 112244579999999999999999987765442 345566
Q ss_pred EEecCCCCcCCCCChHHHHHHHHHHHHHHHHhc
Q 004690 693 FKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 725 (736)
Q Consensus 693 ~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l 725 (736)
++ +. |... ..... ...+.+||.++|
T Consensus 389 i~---~~-~~~e-~~~~~---~~~i~~wL~~~l 413 (414)
T PRK05077 389 IP---FK-PVYR-NFDKA---LQEISDWLEDRL 413 (414)
T ss_pred cc---CC-CccC-CHHHH---HHHHHHHHHHHh
Confidence 65 44 3322 22222 334788999886
No 15
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=1e-18 Score=166.79 Aligned_cols=231 Identities=21% Similarity=0.214 Sum_probs=161.9
Q ss_pred CCCCCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCC
Q 004690 478 GFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG 557 (736)
Q Consensus 478 ~~~~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g 557 (736)
.|.....++-.+++++.+|.+|.+|++.|+.. .++.|+||..|| |+.... +......|+..||+|+.+|.||.|
T Consensus 48 d~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~---~~~~P~vV~fhG-Y~g~~g--~~~~~l~wa~~Gyavf~MdvRGQg 121 (321)
T COG3458 48 DFTLPRVEVYDVTFTGYGGARIKGWLVLPRHE---KGKLPAVVQFHG-YGGRGG--EWHDMLHWAVAGYAVFVMDVRGQG 121 (321)
T ss_pred cccCCceEEEEEEEeccCCceEEEEEEeeccc---CCccceEEEEee-ccCCCC--CccccccccccceeEEEEecccCC
Confidence 34455667889999999999999999999865 378999999999 443322 122345778899999999999988
Q ss_pred CCCh------------hhhhccccccC-----cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCce
Q 004690 558 ELGR------------QWYENGKFLKK-----KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLF 620 (736)
Q Consensus 558 ~~g~------------~~~~~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~ 620 (736)
++.. .|+..|....+ ...+.|+..+++-|.+...+|++||++.|.|.||.|++++++..| ++
T Consensus 122 ~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-ri 200 (321)
T COG3458 122 SSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RI 200 (321)
T ss_pred CccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hh
Confidence 7522 12222222222 247899999999999999999999999999999999999999876 78
Q ss_pred eEEEEcCCccchhhhccCC--CCC-------------Ccccccc---------ccccccccEEEeecCCCCCCCChHHHH
Q 004690 621 KAAVAAVPFVDVLTTMLDP--TIP-------------LTTAEWE---------VKAQNYPHILVTAGLNDPRVMYSEPAK 676 (736)
Q Consensus 621 ~a~v~~~p~~d~~~~~~~~--~~p-------------~~~~~~~---------i~~~~~ppvLi~~G~~D~~Vp~~~~~~ 676 (736)
+++++.+|++.-......- ..| ....-++ +....+.|+|+..|..|++|||.....
T Consensus 201 k~~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA 280 (321)
T COG3458 201 KAVVADYPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFA 280 (321)
T ss_pred hcccccccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHH
Confidence 9999999987533221110 000 0000000 233467789999999999999999989
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcC
Q 004690 677 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 726 (736)
Q Consensus 677 ~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~ 726 (736)
.++++...+ .+++++.-+|.....-.. ..++.|+....+
T Consensus 281 ~yN~l~~~K------~i~iy~~~aHe~~p~~~~-----~~~~~~l~~l~~ 319 (321)
T COG3458 281 AYNALTTSK------TIEIYPYFAHEGGPGFQS-----RQQVHFLKILFG 319 (321)
T ss_pred HhhcccCCc------eEEEeeccccccCcchhH-----HHHHHHHHhhcc
Confidence 998886443 233334556876433211 124567765543
No 16
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.78 E-value=1.6e-18 Score=172.88 Aligned_cols=205 Identities=18% Similarity=0.153 Sum_probs=136.7
Q ss_pred EeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCC-CChhhhhcc--c--c--cc
Q 004690 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE-LGRQWYENG--K--F--LK 571 (736)
Q Consensus 499 i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~-~g~~~~~~~--~--~--~~ 571 (736)
+.+++..|++. ++.|+||++|+.+|.. +.....+..|+++||.|++||+.++.. ......+.. . . ..
T Consensus 1 ~~ay~~~P~~~----~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEGG----GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETTS----SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCCC----CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 46788888763 6889999999988865 334456779999999999999876554 111111111 0 0 00
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCcccccccc
Q 004690 572 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVK 651 (736)
Q Consensus 572 ~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~ 651 (736)
......|+.+++++|.++..++++||+++|+|+||.+++.++.+. +.++|+|+.+|......... ..
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~~~~------------~~ 141 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPPPLE------------DA 141 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGGHHH------------HG
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCcchh------------hh
Confidence 124568889999999999878889999999999999999998886 57899999999111000000 01
Q ss_pred ccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCCh------HHHHHHHHHHHHHHHHhc
Q 004690 652 AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR------FERLREAAFTYTFLMRAL 725 (736)
Q Consensus 652 ~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~------~~~~~~~a~~~~fl~~~l 725 (736)
.....|+|+++|++|+.+|.+...++.++|++.+.++++++| +|++|+|.... ....+.+..+.+||.++|
T Consensus 142 ~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y---~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 142 PKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVY---PGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp GG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEE---TT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred cccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEEC---CCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 123467999999999999999999999999999887765555 59999985432 223334566788888775
No 17
>PRK10162 acetyl esterase; Provisional
Probab=99.78 E-value=1.8e-17 Score=174.40 Aligned_cols=221 Identities=14% Similarity=0.091 Sum_probs=155.7
Q ss_pred ceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCC-CCCchhHHHHHH-CCcEEEEEcccCCCCCCh
Q 004690 484 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLD-RGFIFAIAQIRGGGELGR 561 (736)
Q Consensus 484 ~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~ 561 (736)
...+.+.+++.+| .|++.+++|... ..|+||++|||...... ..+......|+. .|+.|+.+|||...+..
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~~-----~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~- 127 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQPD-----SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR- 127 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCCC-----CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC-
Confidence 3467788888887 599998888532 36999999998654333 335556677877 59999999999876531
Q ss_pred hhhhccccccCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC------CCceeEEEEcCCccch
Q 004690 562 QWYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDV 632 (736)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~~~G~S~GG~la~~~~~~~------p~~~~a~v~~~p~~d~ 632 (736)
....++|+.++++|+.++ ..+|++||+|+|+|+||.|++.++.+. +..++++|+.+|++++
T Consensus 128 ----------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 128 ----------FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ----------CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 234579999999999764 346889999999999999999888642 3568999999998875
Q ss_pred hhhc----cCCCC-CCcccc-------c----------cccc------cccccEEEeecCCCCCCCChHHHHHHHHHHhc
Q 004690 633 LTTM----LDPTI-PLTTAE-------W----------EVKA------QNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 684 (736)
Q Consensus 633 ~~~~----~~~~~-p~~~~~-------~----------~i~~------~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~ 684 (736)
.... ..... .+.... | .+.+ ...||++|++|+.|+.+ .++..|+++|+++
T Consensus 198 ~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~a 275 (318)
T PRK10162 198 RDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAH 275 (318)
T ss_pred CCChhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHc
Confidence 3110 00000 010000 0 0111 13589999999999886 4899999999999
Q ss_pred CCCCCeEEEEecCCCCcCCCCC---hHHHHHHHHHHHHHHHHhcC
Q 004690 685 KTDDNILLFKCELGAGHFSKSG---RFERLREAAFTYTFLMRALS 726 (736)
Q Consensus 685 ~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~a~~~~fl~~~l~ 726 (736)
|++++++.++ |..|++..- -.+..+...++.+||.++++
T Consensus 276 Gv~v~~~~~~---g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 276 QQPCEFKLYP---GTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CCCEEEEEEC---CCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 9988766664 999987421 12333345567789998875
No 18
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=9.5e-18 Score=161.38 Aligned_cols=212 Identities=19% Similarity=0.207 Sum_probs=152.3
Q ss_pred EEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCChhhh
Q 004690 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWY 564 (736)
Q Consensus 486 ~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~ 564 (736)
.+-+..+++.|..+-+..+.|+.. ..++|||.||. .............|.. .++.++..||+|.|.++....
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~~-----~~~~lly~hGN--a~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps 107 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPEA-----AHPTLLYSHGN--AADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS 107 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCccc-----cceEEEEcCCc--ccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc
Confidence 455666777787777765655432 56999999994 2222112222334444 389999999999887665332
Q ss_pred hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccC-CCCCC
Q 004690 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD-PTIPL 643 (736)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~-~~~p~ 643 (736)
..+..+|+.++.+||.+... .+++|+++|+|+|...+..+|.+.| .+|+|+.+|+++..+.+.. .....
T Consensus 108 -------E~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~~ 177 (258)
T KOG1552|consen 108 -------ERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTTY 177 (258)
T ss_pred -------cccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceEE
Confidence 24778999999999999865 7799999999999999999999988 7999999999998876643 11112
Q ss_pred cccccc----ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHH
Q 004690 644 TTAEWE----VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYT 719 (736)
Q Consensus 644 ~~~~~~----i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~ 719 (736)
....|. |+.+.+ |+||+||++|++||+.++.+++++++.. .++++.+ |+||....-..+.++.. ..
T Consensus 178 ~~d~f~~i~kI~~i~~-PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~---g~gH~~~~~~~~yi~~l---~~ 247 (258)
T KOG1552|consen 178 CFDAFPNIEKISKITC-PVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVK---GAGHNDIELYPEYIEHL---RR 247 (258)
T ss_pred eeccccccCcceeccC-CEEEEecccCceecccccHHHHHhcccc---CCCcEEe---cCCCcccccCHHHHHHH---HH
Confidence 222232 333344 5999999999999999999999988754 4666776 99998765555555543 34
Q ss_pred HHHHh
Q 004690 720 FLMRA 724 (736)
Q Consensus 720 fl~~~ 724 (736)
|+...
T Consensus 248 f~~~~ 252 (258)
T KOG1552|consen 248 FISSV 252 (258)
T ss_pred HHHHh
Confidence 54443
No 19
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.77 E-value=2.4e-17 Score=170.18 Aligned_cols=228 Identities=16% Similarity=0.129 Sum_probs=145.5
Q ss_pred EEEEEEeCC-CCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHH-HCCcEEEEEcc--cCCCCCC-
Q 004690 486 TERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQI--RGGGELG- 560 (736)
Q Consensus 486 ~~~~~~~s~-dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~v~~~d~--RG~g~~g- 560 (736)
.+...+.+. -+.++++.++.|++. . .++.|+|+++||..+......+......++ +.|+.|++||. ||.+..+
T Consensus 13 ~~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~ 90 (275)
T TIGR02821 13 QGFYRHKSETCGVPMTFGVFLPPQA-A-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGE 90 (275)
T ss_pred EEEEEEeccccCCceEEEEEcCCCc-c-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCC
Confidence 344444443 456788888999864 2 346899999999765544332333344555 46999999998 6665333
Q ss_pred -hhhhhc--------cc-ccc--CcChHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcC
Q 004690 561 -RQWYEN--------GK-FLK--KKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 627 (736)
Q Consensus 561 -~~~~~~--------~~-~~~--~~~~~~D~~~~~~~l~~~-~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~ 627 (736)
..|... .. ... .......+...+..+++. ..+++++++++|+||||++++.++.++|++|+++++.+
T Consensus 91 ~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 170 (275)
T TIGR02821 91 DDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFA 170 (275)
T ss_pred cccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEEC
Confidence 222210 00 000 111223334444444443 44788999999999999999999999999999999999
Q ss_pred Cccchhhh----------ccCCCCCCcccccc----ccc-cccccEEEeecCCCCCCCC-hHHHHHHHHHHhcCCCCCeE
Q 004690 628 PFVDVLTT----------MLDPTIPLTTAEWE----VKA-QNYPHILVTAGLNDPRVMY-SEPAKFVAKLREMKTDDNIL 691 (736)
Q Consensus 628 p~~d~~~~----------~~~~~~p~~~~~~~----i~~-~~~ppvLi~~G~~D~~Vp~-~~~~~~~~~l~~~~~~~~~~ 691 (736)
|+++.... +...... ...+. +.. ...||++|.||+.|++||. .++..+.++|++++.++++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~ 248 (275)
T TIGR02821 171 PIVAPSRCPWGQKAFSAYLGADEAA--WRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLR 248 (275)
T ss_pred CccCcccCcchHHHHHHHhcccccc--hhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEE
Confidence 98765311 1110000 00000 111 2468899999999999999 68899999999999887665
Q ss_pred EEEecCCCCcCCCCChHHHHHHHHHHHHHHHHh
Q 004690 692 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 692 ~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~ 724 (736)
.+ +|.+|++..- .......+.|+.++
T Consensus 249 ~~---~g~~H~f~~~----~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 249 RQ---AGYDHSYYFI----ASFIADHLRHHAER 274 (275)
T ss_pred Ee---CCCCccchhH----HHhHHHHHHHHHhh
Confidence 55 4899987421 11233456676654
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.77 E-value=2.3e-17 Score=176.91 Aligned_cols=230 Identities=17% Similarity=0.147 Sum_probs=149.6
Q ss_pred CceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChh
Q 004690 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (736)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 562 (736)
++..++..+.+.||.++.+....|.+. .+.|+||++||..+.. ...|...+..|+++||.|+++|+||+|.+...
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~ 132 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGDTC-TFFFEGIARKIASSGYGVFAMDYPGFGLSEGL 132 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCCcc-chHHHHHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 344455556678999998887777542 3568999999954332 22245666788889999999999999876431
Q ss_pred hhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhh-------
Q 004690 563 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT------- 635 (736)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~------- 635 (736)
. +....-....+|+.+.++.+..+...+..++.++||||||.+++.++.++|++++++|+.+|+..+...
T Consensus 133 ~---~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~ 209 (349)
T PLN02385 133 H---GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV 209 (349)
T ss_pred C---CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH
Confidence 0 000011223466667777766543334568999999999999999999999999999999886432100
Q ss_pred ------c----cC----CC--CCC--cc-------cc-----cc---------------------ccccccccEEEeecC
Q 004690 636 ------M----LD----PT--IPL--TT-------AE-----WE---------------------VKAQNYPHILVTAGL 664 (736)
Q Consensus 636 ------~----~~----~~--~p~--~~-------~~-----~~---------------------i~~~~~ppvLi~~G~ 664 (736)
+ .. +. ... .. .. +. +.. ...|+||+||+
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~-i~~P~Lii~G~ 288 (349)
T PLN02385 210 LQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEE-VSLPLLILHGE 288 (349)
T ss_pred HHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhccc-CCCCEEEEEeC
Confidence 0 00 00 000 00 00 00 111 34679999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHH-H-HHHHHHHHHHHHhcC
Q 004690 665 NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER-L-REAAFTYTFLMRALS 726 (736)
Q Consensus 665 ~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~-~~~a~~~~fl~~~l~ 726 (736)
+|..||+..+.++++++... ..+++++ +++||.......+. . .-..++.+||.+++.
T Consensus 289 ~D~vv~~~~~~~l~~~~~~~--~~~l~~i---~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 289 ADKVTDPSVSKFLYEKASSS--DKKLKLY---EDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCCccChHHHHHHHHHcCCC--CceEEEe---CCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999999998877533 2345555 49999875433322 2 234557899998864
No 21
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.76 E-value=5.3e-18 Score=168.13 Aligned_cols=180 Identities=14% Similarity=0.138 Sum_probs=123.2
Q ss_pred EEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHH-HCCcEEEEEcccCCCCCChh--hhhccccccCcChHHH
Q 004690 502 CIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQIRGGGELGRQ--WYENGKFLKKKNTFTD 578 (736)
Q Consensus 502 ~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~v~~~d~RG~g~~g~~--~~~~~~~~~~~~~~~D 578 (736)
+++.|++. +++.|+||++||+.+.............++ +.||+|++||+||++..+.. |..............|
T Consensus 2 ~ly~P~~~---~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 2 YVYVPAGL---TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred EEEcCCCC---CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 56777764 467899999999765433211111123344 46999999999998754433 3322211222345688
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh-----hccCCCCCCcccccc--c-
Q 004690 579 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-----TMLDPTIPLTTAEWE--V- 650 (736)
Q Consensus 579 ~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~-----~~~~~~~p~~~~~~~--i- 650 (736)
+...++++.++..+|++||+|+|+|+||.+++.++.++|++|+++++.++..-... .......+....++. +
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASVCRLVR 158 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHHHHHHh
Confidence 99999999998888999999999999999999999999999999988887532110 000000011111111 0
Q ss_pred -----cccccccEEEeecCCCCCCCChHHHHHHHHHHhc
Q 004690 651 -----KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 684 (736)
Q Consensus 651 -----~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~ 684 (736)
.....||++|+||.+|.+||+..+++++++|++.
T Consensus 159 ~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 159 GMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred ccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 1125677899999999999999999999999876
No 22
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.76 E-value=8.8e-18 Score=174.53 Aligned_cols=226 Identities=20% Similarity=0.206 Sum_probs=144.4
Q ss_pred CCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCC
Q 004690 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 560 (736)
Q Consensus 481 ~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g 560 (736)
.+...+..+.+.+.+|..|.++++.|++. .++.|+||.+||..+.... + .....++.+||+|+.+|.||.|+..
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~~---~~~~Pavv~~hGyg~~~~~--~-~~~~~~a~~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKNA---KGKLPAVVQFHGYGGRSGD--P-FDLLPWAAAGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES-S---SSSEEEEEEE--TT--GGG--H-HHHHHHHHTT-EEEEE--TTTSSSS
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCCC---CCCcCEEEEecCCCCCCCC--c-ccccccccCCeEEEEecCCCCCCCC
Confidence 34667889999999999999999999854 4789999999994433211 1 2234689999999999999988533
Q ss_pred hhhhh-----------ccccccC-----cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 004690 561 RQWYE-----------NGKFLKK-----KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 624 (736)
Q Consensus 561 ~~~~~-----------~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v 624 (736)
..... .|..... ...+.|...++++|.++..+|++||+++|.|+||.+++++|+..| ++++++
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~ 203 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAA 203 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEE
Confidence 22111 1111101 135799999999999999999999999999999999999999976 589999
Q ss_pred EcCCcc-chhhhcc-CC-CCCCcc---------------cc-cc---------ccccccccEEEeecCCCCCCCChHHHH
Q 004690 625 AAVPFV-DVLTTML-DP-TIPLTT---------------AE-WE---------VKAQNYPHILVTAGLNDPRVMYSEPAK 676 (736)
Q Consensus 625 ~~~p~~-d~~~~~~-~~-~~p~~~---------------~~-~~---------i~~~~~ppvLi~~G~~D~~Vp~~~~~~ 676 (736)
+.+|++ |+.+.+. .. ..|... .+ +. ..+.+..|+|+..|..|+.|||.....
T Consensus 204 ~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA 283 (320)
T PF05448_consen 204 ADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFA 283 (320)
T ss_dssp EESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHH
T ss_pred ecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHH
Confidence 999965 4333221 11 111100 00 00 233356679999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHh
Q 004690 677 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 677 ~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~ 724 (736)
.++++... .+++++ +..||.... .. .....+.||.+|
T Consensus 284 ~yN~i~~~---K~l~vy---p~~~He~~~--~~---~~~~~~~~l~~~ 320 (320)
T PF05448_consen 284 AYNAIPGP---KELVVY---PEYGHEYGP--EF---QEDKQLNFLKEH 320 (320)
T ss_dssp HHCC--SS---EEEEEE---TT--SSTTH--HH---HHHHHHHHHHH-
T ss_pred HHhccCCC---eeEEec---cCcCCCchh--hH---HHHHHHHHHhcC
Confidence 99888643 244455 589996532 11 122367899875
No 23
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.75 E-value=4.4e-17 Score=159.74 Aligned_cols=228 Identities=13% Similarity=0.074 Sum_probs=156.7
Q ss_pred eEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhh
Q 004690 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 564 (736)
Q Consensus 485 ~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 564 (736)
....-.+++.+|.++......|... ..+..+|+++|| |+......|...+..|+..||.|+.+|++|+|.+...
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG-~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl-- 99 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHG-YGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL-- 99 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcC-CcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC--
Confidence 3455667788998887776666442 256778999999 5554455688888999999999999999999875421
Q ss_pred hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhcc-------
Q 004690 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML------- 637 (736)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~------- 637 (736)
.+.-..-...++|+.+-.+.+..+....--..+++|+||||.+++.++.++|+.+.++|+.+|++-+...+.
T Consensus 100 -~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~ 178 (313)
T KOG1455|consen 100 -HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS 178 (313)
T ss_pred -cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH
Confidence 111122234567777777776665443345789999999999999999999999999999999765432110
Q ss_pred -----CCCCCCc-------------ccccc-----------------------------ccc---cccccEEEeecCCCC
Q 004690 638 -----DPTIPLT-------------TAEWE-----------------------------VKA---QNYPHILVTAGLNDP 667 (736)
Q Consensus 638 -----~~~~p~~-------------~~~~~-----------------------------i~~---~~~ppvLi~~G~~D~ 667 (736)
..-+|.. ..... +.+ ...-|+||+||++|.
T Consensus 179 ~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~ 258 (313)
T KOG1455|consen 179 ILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDK 258 (313)
T ss_pred HHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCc
Confidence 0000100 00000 111 134569999999999
Q ss_pred CCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCC--ChHHHHHHHHHHHHHHHHh
Q 004690 668 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 668 ~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~a~~~~fl~~~ 724 (736)
++.+.-++++++......+ .++.|+|.-|.... .......-..++.+||.++
T Consensus 259 VTDp~~Sk~Lye~A~S~DK-----TlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 259 VTDPKVSKELYEKASSSDK-----TLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ccCcHHHHHHHHhccCCCC-----ceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999998766554 24555699997653 3333333467789999875
No 24
>PLN02442 S-formylglutathione hydrolase
Probab=99.75 E-value=6e-17 Score=167.47 Aligned_cols=212 Identities=18% Similarity=0.203 Sum_probs=134.0
Q ss_pred eEEEEEEeC-CCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCC----
Q 004690 485 FTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGE---- 558 (736)
Q Consensus 485 ~~~~~~~~s-~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~RG~g~---- 558 (736)
..+++.+.| .-|..+++.+++|+. ..+++.|+|+++||..+......... ....+...|++|++||..++|.
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~--~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPA--SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCc--ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 345555555 346789999999984 34568999999999665543222212 2245566799999999865441
Q ss_pred --------CChhhhhccc-cccCc-C----hHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 004690 559 --------LGRQWYENGK-FLKKK-N----TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 624 (736)
Q Consensus 559 --------~g~~~~~~~~-~~~~~-~----~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v 624 (736)
.+..++.... ...+. . ..+++...++... ..+|+++++|+|+||||++++.++.++|++|++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~ 172 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVS 172 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEE
Confidence 1112111100 00000 1 1223322332222 23588999999999999999999999999999999
Q ss_pred EcCCccchhhhcc-----CCCCCCcccccc-------ccc--cccccEEEeecCCCCCCCCh-HHHHHHHHHHhcCCCCC
Q 004690 625 AAVPFVDVLTTML-----DPTIPLTTAEWE-------VKA--QNYPHILVTAGLNDPRVMYS-EPAKFVAKLREMKTDDN 689 (736)
Q Consensus 625 ~~~p~~d~~~~~~-----~~~~p~~~~~~~-------i~~--~~~ppvLi~~G~~D~~Vp~~-~~~~~~~~l~~~~~~~~ 689 (736)
+.+|++++..... ..........|. +.. ...+|+|++||++|++|+.. ++..+++++++.+.+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~ 252 (283)
T PLN02442 173 AFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVT 252 (283)
T ss_pred EECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeE
Confidence 9999987431100 000000001121 111 24678999999999999974 68999999999998776
Q ss_pred eEEEEecCCCCcCC
Q 004690 690 ILLFKCELGAGHFS 703 (736)
Q Consensus 690 ~~~~~~~~~~gH~~ 703 (736)
+.++ ++.+|.+
T Consensus 253 ~~~~---pg~~H~~ 263 (283)
T PLN02442 253 LRLQ---PGYDHSY 263 (283)
T ss_pred EEEe---CCCCccH
Confidence 5555 4889964
No 25
>PHA02857 monoglyceride lipase; Provisional
Probab=99.75 E-value=7.4e-17 Score=167.29 Aligned_cols=215 Identities=15% Similarity=0.133 Sum_probs=144.8
Q ss_pred eCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhcccccc
Q 004690 492 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 571 (736)
Q Consensus 492 ~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 571 (736)
.+.||.++++.++.|.+ .+.|+|+++||.... ...|...+..|+++||.|+++|+||+|.+..... ....
T Consensus 6 ~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~--~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~---~~~~ 75 (276)
T PHA02857 6 FNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEH--SGRYEELAENISSLGILVFSHDHIGHGRSNGEKM---MIDD 75 (276)
T ss_pred ecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccc--cchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC---CcCC
Confidence 35699999998776632 345889999995443 3347777788999999999999999987643110 0111
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh--------------hcc
Q 004690 572 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--------------TML 637 (736)
Q Consensus 572 ~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~--------------~~~ 637 (736)
-...++|+...++++.+.. ...+++++|+|+||.+++.++.++|++++++|+.+|+.+... ...
T Consensus 76 ~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T PHA02857 76 FGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYP 153 (276)
T ss_pred HHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCC
Confidence 1123577777777776542 235799999999999999999999999999999999754210 000
Q ss_pred CCC----C-----------------CCcc-----cccc-------------ccccccccEEEeecCCCCCCCChHHHHHH
Q 004690 638 DPT----I-----------------PLTT-----AEWE-------------VKAQNYPHILVTAGLNDPRVMYSEPAKFV 678 (736)
Q Consensus 638 ~~~----~-----------------p~~~-----~~~~-------------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~ 678 (736)
... . +... ..+. +.. ...|+||+||++|..||+..+.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvliv~G~~D~i~~~~~~~~l~ 232 (276)
T PHA02857 154 NKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPK-IKTPILILQGTNNEISDVSGAYYFM 232 (276)
T ss_pred CCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhccc-CCCCEEEEecCCCCcCChHHHHHHH
Confidence 000 0 0000 0000 111 3457999999999999999999998
Q ss_pred HHHHhcCCCCCeEEEEecCCCCcCCCCChHH-HHHHHHHHHHHHHHhc
Q 004690 679 AKLREMKTDDNILLFKCELGAGHFSKSGRFE-RLREAAFTYTFLMRAL 725 (736)
Q Consensus 679 ~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~a~~~~fl~~~l 725 (736)
+++.. ..++++++ ++||.......+ .-+-.+++++||.++.
T Consensus 233 ~~~~~---~~~~~~~~---~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 233 QHANC---NREIKIYE---GAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHccC---CceEEEeC---CCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 87643 34455564 999987644333 2334566889998863
No 26
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.74 E-value=6.7e-16 Score=170.20 Aligned_cols=276 Identities=13% Similarity=0.076 Sum_probs=185.9
Q ss_pred HHHHHHHHhcCChhhHHHHHHHHHccccccCcCCcEEeCCEEEEEEecC-CCeeEEEEEEeccCCCCCCCccccCCCCCC
Q 004690 93 ENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQGSYYYYTRTLE-GKEYVQHCRRLIHNNEAPPSVHDTMETGPD 171 (736)
Q Consensus 93 en~~~~~~l~~~~~~~~~l~~e~~~~~~~~~~~~p~~~g~~~y~~~~~~-g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 171 (736)
|+.++++++... +.++++..+|.+.+.......|...+..++|....+ ...+.++.... . +
T Consensus 118 ~~~~~~~~~~~~-~~~~~~a~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~-g--------------- 179 (417)
T TIGR02800 118 LQLLGKQYTVTA-SQLRRVAHRIADAIYEKLTGERGAFSTRIAYVSKSGKSRRYELQVADY-D-G--------------- 179 (417)
T ss_pred EEeeeeeEEcCH-HHHHHHHHHHHHHHHHHhcCCCCCcCCEEEEEEEeCCCCcceEEEEcC-C-C---------------
Confidence 556666666655 555577777777666665677777788777776654 33444554321 1 1
Q ss_pred CCCceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eE
Q 004690 172 APPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-AL 249 (736)
Q Consensus 172 ~~~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l 249 (736)
...+.|++.+.. +..+.|||||++|||+...+| ..+|+++|+++|+.... ...+....++|+||| .|
T Consensus 180 -~~~~~l~~~~~~--------~~~p~~Spdg~~la~~~~~~~--~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l 248 (417)
T TIGR02800 180 -ANPQTITRSREP--------ILSPAWSPDGQKLAYVSFESG--KPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKL 248 (417)
T ss_pred -CCCEEeecCCCc--------eecccCCCCCCEEEEEEcCCC--CcEEEEEECCCCCEEEeecCCCCccceEECCCCCEE
Confidence 245667765431 346789999999999987665 37899999999876544 344444558999999 78
Q ss_pred EEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc
Q 004690 250 VYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV 329 (736)
Q Consensus 250 ~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~ 329 (736)
+|+.... ...+||.++++++.. ..+.... .....+.|+|||++|++.+...+...||++++.+++ .+.+....
T Consensus 249 ~~~~~~~--~~~~i~~~d~~~~~~--~~l~~~~--~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~-~~~l~~~~ 321 (417)
T TIGR02800 249 AVSLSKD--GNPDIYVMDLDGKQL--TRLTNGP--GIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE-VRRLTFRG 321 (417)
T ss_pred EEEECCC--CCccEEEEECCCCCE--EECCCCC--CCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEeecCC
Confidence 8876432 235799999987632 2232211 222356899999999998877666799999998876 66665432
Q ss_pred c-ceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 330 V-GVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 330 ~-~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
. .....|+++|+.|++..... +.++|+.+++++ +..+ ++..........++++++.+++....++...+++++.+
T Consensus 322 ~~~~~~~~spdg~~i~~~~~~~--~~~~i~~~d~~~-~~~~-~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~ 397 (417)
T TIGR02800 322 GYNASPSWSPDGDLIAFVHREG--GGFNIAVMDLDG-GGER-VLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD 397 (417)
T ss_pred CCccCeEECCCCCEEEEEEccC--CceEEEEEeCCC-CCeE-EccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence 2 22356999999998887754 468999999876 2222 33332222222566677789988888888888887765
No 27
>PRK11460 putative hydrolase; Provisional
Probab=99.72 E-value=1.4e-16 Score=159.63 Aligned_cols=186 Identities=17% Similarity=0.167 Sum_probs=131.3
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCC----CCChhhhhccccccCcC-------hHHHHHHH
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG----ELGRQWYENGKFLKKKN-------TFTDFIAC 582 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g----~~g~~~~~~~~~~~~~~-------~~~D~~~~ 582 (736)
.+.|+||++||..++.. .|......|...++.+.++.++|.. ..|..|+.... ....+ ..+.+.+.
T Consensus 14 ~~~~~vIlLHG~G~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~-~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQG-ITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCcEEEEEeCCCCChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCC-CCccchHHHHHHHHHHHHHH
Confidence 45689999999554433 3666777888877666666677632 23567764321 11111 22345556
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCccccccccccccccEEEee
Q 004690 583 AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTA 662 (736)
Q Consensus 583 ~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~ 662 (736)
++++.++..++++||+++|+|+||.+++.++.++|+.++++|+.+|.+.. .+. .....+|+|++|
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------~~~-------~~~~~~pvli~h 155 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------LPE-------TAPTATTIHLIH 155 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------ccc-------cccCCCcEEEEe
Confidence 67777776678899999999999999999998999988888887774321 110 011356799999
Q ss_pred cCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcC
Q 004690 663 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 726 (736)
Q Consensus 663 G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~ 726 (736)
|.+|++||++.+.+++++|++.+.+++++.+ +++||.+... +..++.+||.+.|.
T Consensus 156 G~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~---~~~gH~i~~~------~~~~~~~~l~~~l~ 210 (232)
T PRK11460 156 GGEDPVIDVAHAVAAQEALISLGGDVTLDIV---EDLGHAIDPR------LMQFALDRLRYTVP 210 (232)
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEE---CCCCCCCCHH------HHHHHHHHHHHHcc
Confidence 9999999999999999999999877655555 5999987532 33446678887774
No 28
>PRK10749 lysophospholipase L2; Provisional
Probab=99.72 E-value=2.8e-16 Score=166.89 Aligned_cols=225 Identities=17% Similarity=0.185 Sum_probs=142.1
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhc
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
+...+...||.++.+....+. .+.|+||++||..+.. ..|...+..|+++||.|+++|+||+|.++......
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~~~~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 102 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRIESY--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDP 102 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC------CCCcEEEEECCccchH--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCC
Confidence 455666778988877644332 2347899999954322 23556666788999999999999999876432110
Q ss_pred --cccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchh----h------
Q 004690 567 --GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL----T------ 634 (736)
Q Consensus 567 --~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~----~------ 634 (736)
+....-....+|+.+.++.+... .+..++.++||||||.+++.++.++|+.++++|+.+|..... .
T Consensus 103 ~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~ 180 (330)
T PRK10749 103 HRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRI 180 (330)
T ss_pred CcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHH
Confidence 00001112334555555555433 134689999999999999999999999999999999864310 0
Q ss_pred --hc------c-------C--CCCCC-------ccc--------------------ccc------------cc--ccccc
Q 004690 635 --TM------L-------D--PTIPL-------TTA--------------------EWE------------VK--AQNYP 656 (736)
Q Consensus 635 --~~------~-------~--~~~p~-------~~~--------------------~~~------------i~--~~~~p 656 (736)
.. . . ...+. ... .+. .. +....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (330)
T PRK10749 181 LNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITT 260 (330)
T ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCC
Confidence 00 0 0 00000 000 000 00 11346
Q ss_pred cEEEeecCCCCCCCChHHHHHHHHHHhcCCC---CCeEEEEecCCCCcCCCCChH-HHHHHHHHHHHHHHHh
Q 004690 657 HILVTAGLNDPRVMYSEPAKFVAKLREMKTD---DNILLFKCELGAGHFSKSGRF-ERLREAAFTYTFLMRA 724 (736)
Q Consensus 657 pvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~gH~~~~~~~-~~~~~~a~~~~fl~~~ 724 (736)
|+||+||++|..|++..+..+++++++++.+ .+++++ +++||....... .+..-..++.+||.++
T Consensus 261 P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~---~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 261 PLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVI---KGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEe---CCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 7999999999999999999999999876532 345555 499997643222 1222345578898764
No 29
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=1.6e-15 Score=167.13 Aligned_cols=203 Identities=12% Similarity=0.119 Sum_probs=147.0
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+..+.|||||++|||+...+| ..+||++|+.+|+...+ ..++....++||||| .|+|+...+ ...+||++++.+
T Consensus 220 ~~~p~wSPDG~~La~~s~~~g--~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~--g~~~Iy~~dl~t 295 (448)
T PRK04792 220 LMSPAWSPDGRKLAYVSFENR--KAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKD--GQPEIYVVDIAT 295 (448)
T ss_pred ccCceECCCCCEEEEEEecCC--CcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCC--CCeEEEEEECCC
Confidence 456899999999999988765 47899999999987655 344455568999999 798876543 235799999987
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeec-cccceeEEEeeeCCEEEEEEcC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDTAASHRGNHFFITRRS 349 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~t~~ 349 (736)
+. ...+... ......+.|||||++|++.+...+..+||++|+++++ .+.++. ........|+|||++|+|.+..
T Consensus 296 g~--~~~lt~~--~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~-~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~ 370 (448)
T PRK04792 296 KA--LTRITRH--RAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK-VSRLTFEGEQNLGGSITPDGRSMIMVNRT 370 (448)
T ss_pred CC--eEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEEecCCCCCcCeeECCCCCEEEEEEec
Confidence 63 2333322 1233467899999999999877777899999999887 666653 2222234699999999998776
Q ss_pred CCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 350 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
+ ..++|+.+++++. ....+.....+.. ..++++++.+++....++...+++++++
T Consensus 371 ~--g~~~I~~~dl~~g-~~~~lt~~~~d~~-ps~spdG~~I~~~~~~~g~~~l~~~~~~ 425 (448)
T PRK04792 371 N--GKFNIARQDLETG-AMQVLTSTRLDES-PSVAPNGTMVIYSTTYQGKQVLAAVSID 425 (448)
T ss_pred C--CceEEEEEECCCC-CeEEccCCCCCCC-ceECCCCCEEEEEEecCCceEEEEEECC
Confidence 4 3578999998773 3333333222222 2566777788888888888888888875
No 30
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.71 E-value=5.1e-15 Score=161.79 Aligned_cols=206 Identities=12% Similarity=0.029 Sum_probs=139.0
Q ss_pred EeeEEECCCCCE--EEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEE--
Q 004690 193 VGCFQVSPDNKL--VAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH-- 266 (736)
Q Consensus 193 ~~~~~~SPDG~~--la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~-- 266 (736)
...|+|||||+. ++|+..++| ..+||++++++|+...+ ..++....++||||| +|+|+..... ..++|.+
T Consensus 187 ~~sP~wSPDG~~~~~~y~S~~~g--~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g--~~di~~~~~ 262 (428)
T PRK01029 187 SITPTWMHIGSGFPYLYVSYKLG--VPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYG--NPDLFIQSF 262 (428)
T ss_pred cccceEccCCCceEEEEEEccCC--CceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCC--CcceeEEEe
Confidence 357899999988 566887777 47999999999987765 345555569999999 8999875322 2246654
Q ss_pred EcCCCC-CCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccc-eeEEEeeeCCEE
Q 004690 267 KLEADQ-SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG-VDTAASHRGNHF 343 (736)
Q Consensus 267 ~l~t~~-~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~-~~~~~s~dg~~l 343 (736)
++.++. .+...+.... ......+.|||||++|++.+...+..+||+++++... ..+.++..... ....|+|||++|
T Consensus 263 ~~~~g~~g~~~~lt~~~-~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~L 341 (428)
T PRK01029 263 SLETGAIGKPRRLLNEA-FGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKI 341 (428)
T ss_pred ecccCCCCcceEeecCC-CCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEE
Confidence 444321 1233444322 1222357899999999998876666789999886422 25666654322 245699999999
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEE--eCCEEEEEEEeCCeeEEEEEEcC
Q 004690 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQL--FIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~--~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
+|.+..++ ..+|+.+++++. ..+.+..... ....+.| +++.+++....++...|++++++
T Consensus 342 af~~~~~g--~~~I~v~dl~~g-~~~~Lt~~~~--~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~ 403 (428)
T PRK01029 342 AFCSVIKG--VRQICVYDLATG-RDYQLTTSPE--NKESPSWAIDSLHLVYSAGNSNESELYLISLI 403 (428)
T ss_pred EEEEcCCC--CcEEEEEECCCC-CeEEccCCCC--CccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 99988753 578999999873 3333443321 2334444 45677777777777788888887
No 31
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=3e-15 Score=162.43 Aligned_cols=204 Identities=10% Similarity=0.023 Sum_probs=146.5
Q ss_pred EeeEEECCCCCE-EEEEEeCCCCcEEEEEEEECCCCCeeccc-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcC
Q 004690 193 VGCFQVSPDNKL-VAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 193 ~~~~~~SPDG~~-la~~~~~~G~e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
...+.|||||++ ++|+...++ ..+||++|+++|+...++ .++....+.||||| +++|+.... ...+||++++.
T Consensus 190 ~~~p~wSpDG~~~i~y~s~~~~--~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~dl~ 265 (419)
T PRK04043 190 NIFPKWANKEQTAFYYTSYGER--KPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPK--GQPDIYLYDTN 265 (419)
T ss_pred eEeEEECCCCCcEEEEEEccCC--CCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccC--CCcEEEEEECC
Confidence 346899999997 666665544 359999999999987763 44445568999999 898887543 24679999997
Q ss_pred CCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEEEcC
Q 004690 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS 349 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~ 349 (736)
++ +...+.... .....+.|||||++|+|.++..+..+||++|+++++ .+.++.... ....|+|||++|+|.+..
T Consensus 266 ~g--~~~~LT~~~--~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~-~~rlt~~g~-~~~~~SPDG~~Ia~~~~~ 339 (419)
T PRK04043 266 TK--TLTQITNYP--GIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGS-VEQVVFHGK-NNSSVSTYKNYIVYSSRE 339 (419)
T ss_pred CC--cEEEcccCC--CccCccEECCCCCEEEEEECCCCCceEEEEECCCCC-eEeCccCCC-cCceECCCCCEEEEEEcC
Confidence 76 233343222 233457899999999999988888899999999887 666654211 234699999999999876
Q ss_pred CCC----CCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 350 DEL----FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 350 ~~~----~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
... ..++|+.+++++. ..+.+.....+ ....++++++.+++.....+...|.+++++
T Consensus 340 ~~~~~~~~~~~I~v~d~~~g-~~~~LT~~~~~-~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~ 400 (419)
T PRK04043 340 TNNEFGKNTFNLYLISTNSD-YIRRLTANGVN-QFPRFSSDGGSIMFIKYLGNQSALGIIRLN 400 (419)
T ss_pred CCcccCCCCcEEEEEECCCC-CeEECCCCCCc-CCeEECCCCCEEEEEEccCCcEEEEEEecC
Confidence 421 2378999999873 33445443222 224566777788888877778788888887
No 32
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.69 E-value=3e-16 Score=144.47 Aligned_cols=222 Identities=19% Similarity=0.150 Sum_probs=162.2
Q ss_pred CceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHH-HHHHCCcEEEEEcccCCCCCCh
Q 004690 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRL-SLLDRGFIFAIAQIRGGGELGR 561 (736)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~d~RG~g~~g~ 561 (736)
++..+++++.+.|.+++.++++..+ ...|++|++||..|+.. .+.+.+. .+...+..|++++|||.|.+..
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmG--hr~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMG--HRLPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCccc--chhhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 4556999999999999999987622 36899999999555432 2444444 5567799999999999887655
Q ss_pred hhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCC
Q 004690 562 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI 641 (736)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~ 641 (736)
.-.+.|.. -|..++++||..+...|..+|.+.|.|.||..|..+|+.+.+++.|+|....|+.+...+...-.
T Consensus 123 spsE~GL~-------lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~ 195 (300)
T KOG4391|consen 123 SPSEEGLK-------LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVF 195 (300)
T ss_pred Ccccccee-------ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheec
Confidence 54544433 58999999999999999999999999999999999999999999999999998887443322111
Q ss_pred C-------Ccc--cccc----ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChH
Q 004690 642 P-------LTT--AEWE----VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 708 (736)
Q Consensus 642 p-------~~~--~~~~----i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~ 708 (736)
| +.. ..|. +. ....|.|++.|..|..|||-+-+++++......+ ++..| |++.|..+--..
T Consensus 196 p~~~k~i~~lc~kn~~~S~~ki~-~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~K--rl~eF---P~gtHNDT~i~d 269 (300)
T KOG4391|consen 196 PFPMKYIPLLCYKNKWLSYRKIG-QCRMPFLFISGLKDELVPPVMMRQLYELCPSRTK--RLAEF---PDGTHNDTWICD 269 (300)
T ss_pred cchhhHHHHHHHHhhhcchhhhc-cccCceEEeecCccccCCcHHHHHHHHhCchhhh--hheeC---CCCccCceEEec
Confidence 2 111 1121 22 3556799999999999999999999998766543 23444 589997643222
Q ss_pred HHHHHHHHHHHHHHHhcCCC
Q 004690 709 ERLREAAFTYTFLMRALSML 728 (736)
Q Consensus 709 ~~~~~~a~~~~fl~~~l~~~ 728 (736)
..++. +-+||.+.-..+
T Consensus 270 GYfq~---i~dFlaE~~~~~ 286 (300)
T KOG4391|consen 270 GYFQA---IEDFLAEVVKSS 286 (300)
T ss_pred cHHHH---HHHHHHHhccCC
Confidence 23333 457888765543
No 33
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.69 E-value=1.7e-16 Score=147.89 Aligned_cols=190 Identities=17% Similarity=0.145 Sum_probs=135.4
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
+-+||++||..|+..+ .......|.++||.|.+|+|||+|-.+..+-+.+...+ ++|+.++.++|.+.++ +
T Consensus 15 ~~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy---~ 85 (243)
T COG1647 15 NRAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY---D 85 (243)
T ss_pred CEEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC---C
Confidence 3789999996665443 45567789999999999999999988776665444443 5799999999999988 6
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh----------h---ccC---CCCCCcccc-------cc---
Q 004690 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT----------T---MLD---PTIPLTTAE-------WE--- 649 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~----------~---~~~---~~~p~~~~~-------~~--- 649 (736)
.|++.|.||||.+++.+|.++| .+++|..++.+.+.. + +.. .+.+....+ +.
T Consensus 86 eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~ 163 (243)
T COG1647 86 EIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTT 163 (243)
T ss_pred eEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHH
Confidence 8999999999999999999998 567776665544211 0 000 000000000 00
Q ss_pred ---------ccc-c--ccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHH
Q 004690 650 ---------VKA-Q--NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFT 717 (736)
Q Consensus 650 ---------i~~-~--~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~ 717 (736)
+.. . ++-|+||+.|.+|+.||.+.+..+++.+.... .++.+|. +.||....+... -.-.+++
T Consensus 164 ~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~--KeL~~~e---~SgHVIt~D~Er-d~v~e~V 237 (243)
T COG1647 164 AQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDD--KELKWLE---GSGHVITLDKER-DQVEEDV 237 (243)
T ss_pred HHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCc--ceeEEEc---cCCceeecchhH-HHHHHHH
Confidence 111 1 56779999999999999999999999886554 3456665 999988655432 2223458
Q ss_pred HHHHH
Q 004690 718 YTFLM 722 (736)
Q Consensus 718 ~~fl~ 722 (736)
+.||.
T Consensus 238 ~~FL~ 242 (243)
T COG1647 238 ITFLE 242 (243)
T ss_pred HHHhh
Confidence 88985
No 34
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.69 E-value=4.3e-15 Score=163.93 Aligned_cols=203 Identities=14% Similarity=0.120 Sum_probs=143.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccc-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+..++|||||++|||....+| ..+||++|+++|+....+ .++....++||||| +|+|+...+ ...+||.+++.+
T Consensus 204 v~~p~wSpDG~~lay~s~~~g--~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~d~~~ 279 (435)
T PRK05137 204 VLTPRFSPNRQEITYMSYANG--RPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQG--GNTDIYTMDLRS 279 (435)
T ss_pred eEeeEECCCCCEEEEEEecCC--CCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecC--CCceEEEEECCC
Confidence 567999999999999988766 378999999999876553 44445568999999 788876533 245799999987
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eEEEeeeCCEEEEEEcC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRS 349 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~t~~ 349 (736)
+. ...+... ......+.|||||++|++.++..+..+||++|+++++ .+.++...... ...|+|||++|++.+..
T Consensus 280 ~~--~~~Lt~~--~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~-~~~lt~~~~~~~~~~~SpdG~~ia~~~~~ 354 (435)
T PRK05137 280 GT--TTRLTDS--PAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN-PRRISFGGGRYSTPVWSPRGDLIAFTKQG 354 (435)
T ss_pred Cc--eEEccCC--CCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC-eEEeecCCCcccCeEECCCCCEEEEEEcC
Confidence 63 2333322 2233457899999999998877677899999998876 77776532222 34699999999998865
Q ss_pred CCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCe---eEEEEEEcC
Q 004690 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGL---QKITTYRLP 408 (736)
Q Consensus 350 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~---~~l~v~~l~ 408 (736)
. ..++|+.+++++. .. .++.......-..++++++.+++.....+. .+|++++++
T Consensus 355 ~--~~~~i~~~d~~~~-~~-~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~ 412 (435)
T PRK05137 355 G--GQFSIGVMKPDGS-GE-RILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT 412 (435)
T ss_pred C--CceEEEEEECCCC-ce-EeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence 4 2578999998653 22 333333222222344555677776665554 578888876
No 35
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.69 E-value=5.1e-15 Score=170.97 Aligned_cols=240 Identities=18% Similarity=0.211 Sum_probs=163.2
Q ss_pred CCCCCCceEEEEEEeCC-----CCe--EEeEEEEEecCCccCCCCCcEEEEe----cCCCCcC-----------C--C-C
Q 004690 478 GFDTNNYFTERKWASAS-----DGT--QIPICIVYRKNLVKLDGSDPLLLYG----YGSYEIC-----------N--D-P 532 (736)
Q Consensus 478 ~~~~~~~~~~~~~~~s~-----dG~--~i~~~~~~p~~~~~~~~~~P~vl~~----hGg~~~~-----------~--~-~ 532 (736)
-|+......|.|++.+. ||. .|.+.|+.|+.. ..+-+.|+|+-. .|.-... . . +
T Consensus 162 ~~~~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~-~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~ 240 (767)
T PRK05371 162 VFDTSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKET-ASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPP 240 (767)
T ss_pred ccCcccceEEEEEEeCCCCCCCCCCcceEEEEEECCCcc-CCCCccceEEecCccccCCCCcccccccccCCccccccCC
Confidence 46777777888888763 453 688888888776 333477887743 2320000 0 0 0
Q ss_pred C--------------------------CchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHH
Q 004690 533 A--------------------------FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL 586 (736)
Q Consensus 533 ~--------------------------~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l 586 (736)
. ......+|+.+||+|++.|.||.|+++..|.. ......+|..++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl 315 (767)
T PRK05371 241 RAQFTPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWL 315 (767)
T ss_pred ccccccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHH
Confidence 0 01233689999999999999999988776542 2345679999999999
Q ss_pred HHc--CCCC------------CCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCC----------
Q 004690 587 IKN--CYCT------------KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP---------- 642 (736)
Q Consensus 587 ~~~--~~~d------------~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p---------- 642 (736)
..+ .++| .+||+++|.|+||+++.++|+..|+.++|+|+.+++.++..+....+..
T Consensus 316 ~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged 395 (767)
T PRK05371 316 NGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGED 395 (767)
T ss_pred hhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcc
Confidence 853 2223 4799999999999999999998888999999999988765332110000
Q ss_pred -----------------------------------------Ccccccc----cc--ccccccEEEeecCCCCCCCChHHH
Q 004690 643 -----------------------------------------LTTAEWE----VK--AQNYPHILVTAGLNDPRVMYSEPA 675 (736)
Q Consensus 643 -----------------------------------------~~~~~~~----i~--~~~~ppvLi~~G~~D~~Vp~~~~~ 675 (736)
....-|. +. .....|+|++||.+|.+|++.++.
T Consensus 396 ~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~ 475 (767)
T PRK05371 396 LDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVY 475 (767)
T ss_pred hhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHH
Confidence 0000011 11 114567999999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcCCC
Q 004690 676 KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 728 (736)
Q Consensus 676 ~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~~~ 728 (736)
+++++|++.+.+.++++. ..+|...... ...+....+.+||.++|...
T Consensus 476 ~ly~aL~~~g~pkkL~l~----~g~H~~~~~~-~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 476 QWWDALPENGVPKKLFLH----QGGHVYPNNW-QSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred HHHHHHHhcCCCeEEEEe----CCCccCCCch-hHHHHHHHHHHHHHhccccC
Confidence 999999998877766544 5688654321 12222344789999998654
No 36
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=1.9e-14 Score=156.18 Aligned_cols=240 Identities=10% Similarity=0.050 Sum_probs=163.4
Q ss_pred CEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCC-e-EEEEEeCCCCCCceEEEEEcCCCCCCcEEEEe
Q 004690 203 KLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-A-LVYITMDEILRPDKAWLHKLEADQSNDICLYH 280 (736)
Q Consensus 203 ~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg-~-l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~ 280 (736)
+++||.....|...++|+++|.++...+..+..+....+.||||| + ++|++... +..+||++++.++ +...+..
T Consensus 155 ~r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~~~~~~~p~wSpDG~~~i~y~s~~~--~~~~Iyv~dl~tg--~~~~lt~ 230 (419)
T PRK04043 155 KRKVVFSKYTGPKKSNIVLADYTLTYQKVIVKGGLNIFPKWANKEQTAFYYTSYGE--RKPTLYKYNLYTG--KKEKIAS 230 (419)
T ss_pred eeEEEEEEccCCCcceEEEECCCCCceeEEccCCCeEeEEECCCCCcEEEEEEccC--CCCEEEEEECCCC--cEEEEec
Confidence 577887775554568999999998876654333444569999999 6 66666542 2348999999887 3445543
Q ss_pred ecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccc-ceeEEEeeeCCEEEEEEcCCCCCCcEEEE
Q 004690 281 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 359 (736)
Q Consensus 281 ~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~~l~~ 359 (736)
.. .....+.|||||++|++.....+..+||++++++++ .+.++.... .....|+|||++|+|.+++.+ ..+||+
T Consensus 231 ~~--g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g--~~~Iy~ 305 (419)
T PRK04043 231 SQ--GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-LTQITNYPGIDVNGNFVEDDKRIVFVSDRLG--YPNIFM 305 (419)
T ss_pred CC--CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-EEEcccCCCccCccEECCCCCEEEEEECCCC--CceEEE
Confidence 22 233356799999999998877777899999999887 888876543 344679999999999999864 568999
Q ss_pred EeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeC------CeeEEEEEEcCCCCCccccccCCceeeecCcccccC
Q 004690 360 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREG------GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID 433 (736)
Q Consensus 360 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~------g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~ 433 (736)
+++++. ..+.++..+. . ...++++++++++..... +..+|++++++ ++..+.++.. . ...
T Consensus 306 ~dl~~g-~~~rlt~~g~-~-~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~--~g~~~~LT~~--------~-~~~ 371 (419)
T PRK04043 306 KKLNSG-SVEQVVFHGK-N-NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN--SDYIRRLTAN--------G-VNQ 371 (419)
T ss_pred EECCCC-CeEeCccCCC-c-CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC--CCCeEECCCC--------C-CcC
Confidence 999873 3334443322 2 236778888898877654 33578888886 3323222211 1 111
Q ss_pred CCCcccCcceEEEEeccCCCCcEEEEEECCCCc
Q 004690 434 PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 434 ~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~ 466 (736)
....++|+..+.|.... ..-..++.+++..+.
T Consensus 372 ~p~~SPDG~~I~f~~~~-~~~~~L~~~~l~g~~ 403 (419)
T PRK04043 372 FPRFSSDGGSIMFIKYL-GNQSALGIIRLNYNK 403 (419)
T ss_pred CeEECCCCCEEEEEEcc-CCcEEEEEEecCCCe
Confidence 23456788877777543 333468888886654
No 37
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.68 E-value=1.4e-15 Score=160.44 Aligned_cols=212 Identities=21% Similarity=0.234 Sum_probs=147.8
Q ss_pred eCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCc-hhH-HHHHHCCcEEEEEcccCCCCCChhhhhcccc
Q 004690 492 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSR-LSLLDRGFIFAIAQIRGGGELGRQWYENGKF 569 (736)
Q Consensus 492 ~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~-~~~-~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~ 569 (736)
...++..+++.++.| .. ...++.|+|||+|||.+........ ... ..++..|+.|+.+|||-..+.
T Consensus 57 ~~~~~~~~~~~~y~p-~~-~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~---------- 124 (312)
T COG0657 57 AGPSGDGVPVRVYRP-DR-KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH---------- 124 (312)
T ss_pred cCCCCCceeEEEECC-CC-CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC----------
Confidence 344556688888888 32 3346789999999987765544333 333 355667999999999987764
Q ss_pred ccCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeEEEEcCCccchhhhccCCCCC
Q 004690 570 LKKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTMLDPTIP 642 (736)
Q Consensus 570 ~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~~~G~S~GG~la~~~~~~~p~----~~~a~v~~~p~~d~~~~~~~~~~p 642 (736)
.-...++|+.+++.|+.++. .+|+++|+++|+|+||+|++.++....+ ..++.++.+|.+|... . .....
T Consensus 125 -~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~-~~~~~ 201 (312)
T COG0657 125 -PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-S-AASLP 201 (312)
T ss_pred -CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-c-ccchh
Confidence 22456799999999999774 4799999999999999999988865332 4689999999988764 0 00000
Q ss_pred -------Cccc--c-c---------------ccccc------ccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeE
Q 004690 643 -------LTTA--E-W---------------EVKAQ------NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 691 (736)
Q Consensus 643 -------~~~~--~-~---------------~i~~~------~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~ 691 (736)
+... . | .+++. ..||+||++|+.|...+ ++..++++|+++|++++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~ 279 (312)
T COG0657 202 GYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELR 279 (312)
T ss_pred hcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEE
Confidence 0000 0 0 01111 26899999999999888 9999999999999988666
Q ss_pred EEEecCCCCcCCCCCh-HHHHHHHHHHHHHHHH
Q 004690 692 LFKCELGAGHFSKSGR-FERLREAAFTYTFLMR 723 (736)
Q Consensus 692 ~~~~~~~~gH~~~~~~-~~~~~~~a~~~~fl~~ 723 (736)
.++ +..|.+.... .........+..|+..
T Consensus 280 ~~~---g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 280 VYP---GMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred EeC---CcceeccccCcHHHHHHHHHHHHHHHH
Confidence 664 8999873222 2333334445666653
No 38
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=7.5e-15 Score=161.28 Aligned_cols=203 Identities=13% Similarity=0.097 Sum_probs=144.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccc-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+..++|||||++|||+...++ ..+||++|+.+|+..... .++....++||||| .|+|+...+ ...+||..++.+
T Consensus 198 v~~p~wSPDG~~la~~s~~~~--~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~d~~~ 273 (427)
T PRK02889 198 IISPAWSPDGTKLAYVSFESK--KPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRD--GNSQIYTVNADG 273 (427)
T ss_pred cccceEcCCCCEEEEEEccCC--CcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccC--CCceEEEEECCC
Confidence 457899999999999987655 468999999999876553 44455569999999 788876543 245799998876
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc-cceeEEEeeeCCEEEEEEcC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRS 349 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~t~~ 349 (736)
+. ...+.. . ......+.|||||++|++.++..+..+||.+++++++ .+.++... ......|+|||++|++.++.
T Consensus 274 ~~--~~~lt~-~-~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~ 348 (427)
T PRK02889 274 SG--LRRLTQ-S-SGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA-AQRVTFTGSYNTSPRISPDGKLLAYISRV 348 (427)
T ss_pred CC--cEECCC-C-CCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc-eEEEecCCCCcCceEECCCCCEEEEEEcc
Confidence 52 233322 1 1223457899999999998876677899999998876 65555321 22235699999999998876
Q ss_pred CCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 350 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
++ .+.|+.+++++. ....+.....+ .-..++++++.+++.....+...+++++++
T Consensus 349 ~g--~~~I~v~d~~~g-~~~~lt~~~~~-~~p~~spdg~~l~~~~~~~g~~~l~~~~~~ 403 (427)
T PRK02889 349 GG--AFKLYVQDLATG-QVTALTDTTRD-ESPSFAPNGRYILYATQQGGRSVLAAVSSD 403 (427)
T ss_pred CC--cEEEEEEECCCC-CeEEccCCCCc-cCceECCCCCEEEEEEecCCCEEEEEEECC
Confidence 53 578999998763 33344433222 223455666788888888888888888775
No 39
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=2.3e-14 Score=158.14 Aligned_cols=246 Identities=11% Similarity=0.124 Sum_probs=168.3
Q ss_pred CCCEEEEEEeCCCCc--EEEEEEEECCCCCeecccc-cCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcE
Q 004690 201 DNKLVAYAEDTKGDE--IYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDI 276 (736)
Q Consensus 201 DG~~la~~~~~~G~e--~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~ 276 (736)
=.++|||..+.+|.+ ..+||++|.+++....++. ......++||||| .|+|++.... ..+||++++.++. ..
T Consensus 164 f~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g--~~~i~~~dl~~g~--~~ 239 (435)
T PRK05137 164 FDTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANG--RPRVYLLDLETGQ--RE 239 (435)
T ss_pred CCCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCC--CCEEEEEECCCCc--EE
Confidence 357899998876643 6799999998887765533 2335569999999 8999886432 3579999998773 23
Q ss_pred EEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccc-ceeEEEeeeCCEEEEEEcCCCCCCc
Q 004690 277 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNS 355 (736)
Q Consensus 277 ~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~ 355 (736)
.+.... .....+.|||||+.|++..+..+..+||++|+++++ .+.++.... .....|+|||++|+|.+++.+ ..
T Consensus 240 ~l~~~~--g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g--~~ 314 (435)
T PRK05137 240 LVGNFP--GMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT-TTRLTDSPAIDTSPSYSPDGSQIVFESDRSG--SP 314 (435)
T ss_pred EeecCC--CcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc-eEEccCCCCccCceeEcCCCCEEEEEECCCC--CC
Confidence 332222 223367899999999998877777899999999887 777775432 223569999999999998764 46
Q ss_pred EEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCC
Q 004690 356 ELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPS 435 (736)
Q Consensus 356 ~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~ 435 (736)
+||.+++++. ..+.+...........++++++.+++.....+..++++++++ ++.. +.+. . .+.+...
T Consensus 315 ~Iy~~d~~g~-~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~--~~~~------~~lt--~-~~~~~~p 382 (435)
T PRK05137 315 QLYVMNADGS-NPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD--GSGE------RILT--S-GFLVEGP 382 (435)
T ss_pred eEEEEECCCC-CeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECC--CCce------Eecc--C-CCCCCCC
Confidence 8999998763 334444333222223466677788877766666788888875 3322 1121 1 1123344
Q ss_pred CcccCcceEEEEeccCCCC--cEEEEEECCCCcE
Q 004690 436 ESVFSSRILRFHYSSLRTP--PSVYDYDMDMGIS 467 (736)
Q Consensus 436 ~~~~~~~~~~~~~ss~~~P--~~~~~~d~~~~~~ 467 (736)
..+++++.++|.......+ ..+|.+|+.+++.
T Consensus 383 ~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~ 416 (435)
T PRK05137 383 TWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE 416 (435)
T ss_pred eECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence 5677888888877655543 5899999877664
No 40
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=1.2e-14 Score=160.47 Aligned_cols=203 Identities=14% Similarity=0.158 Sum_probs=146.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccc-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+..++|||||++|||+....+ ..+||++|+++|+..... ..+....+.||||| .|+|+...+. ..+||++++.+
T Consensus 201 ~~~p~wSpDG~~la~~s~~~~--~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g--~~~Iy~~d~~~ 276 (430)
T PRK00178 201 ILSPRWSPDGKRIAYVSFEQK--RPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG--NPEIYVMDLAS 276 (430)
T ss_pred eeeeeECCCCCEEEEEEcCCC--CCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCC--CceEEEEECCC
Confidence 567899999999999987655 468999999999876653 34444569999999 7888765432 35799999987
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc-cceeEEEeeeCCEEEEEEcC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRS 349 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~t~~ 349 (736)
+. ...+... ......+.|||||++|++.++..+..+||++++.+++ .+.++... ......|+|||++|++....
T Consensus 277 ~~--~~~lt~~--~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~-~~~lt~~~~~~~~~~~Spdg~~i~~~~~~ 351 (430)
T PRK00178 277 RQ--LSRVTNH--PAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR-AERVTFVGNYNARPRLSADGKTLVMVHRQ 351 (430)
T ss_pred CC--eEEcccC--CCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEeecCCCCccceEECCCCCEEEEEEcc
Confidence 63 3333322 1233457899999999999877777899999998887 66665322 12234699999999999876
Q ss_pred CCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 350 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
++ .+.|+.+|+++. ..+.+.....+.. ..++++++.+++...+++...|++++++
T Consensus 352 ~~--~~~l~~~dl~tg-~~~~lt~~~~~~~-p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 352 DG--NFHVAAQDLQRG-SVRILTDTSLDES-PSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred CC--ceEEEEEECCCC-CEEEccCCCCCCC-ceECCCCCEEEEEEecCCceEEEEEECC
Confidence 53 578999999863 3333433322222 2566667788888888888888888876
No 41
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=1.4e-14 Score=158.85 Aligned_cols=203 Identities=10% Similarity=0.037 Sum_probs=144.2
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+..++|||||++|||.....| ..+|+++|+++|+...+ ..++....+.||||| .|+|+.... ...+||.+++.+
T Consensus 201 ~~~p~wSPDG~~la~~s~~~g--~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~--g~~~I~~~d~~t 276 (429)
T PRK03629 201 LMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT--GSLNLYVMDLAS 276 (429)
T ss_pred eeeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCC--CCcEEEEEECCC
Confidence 567999999999999987655 47899999999987655 344555569999999 788876532 224699999987
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccc-eeEEEeeeCCEEEEEEcC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRS 349 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~t~~ 349 (736)
+ +...+.... .....+.|||||++|++.+...+..+||.+++++++ .+.++..... ....|+|||++|++....
T Consensus 277 g--~~~~lt~~~--~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~-~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~ 351 (429)
T PRK03629 277 G--QIRQVTDGR--SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSN 351 (429)
T ss_pred C--CEEEccCCC--CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC-eEEeecCCCCccCEEECCCCCEEEEEEcc
Confidence 6 233333222 223468899999999999877667799999999886 6666543222 235699999999998876
Q ss_pred CCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 350 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
++ ...|+.+++++. ..+.+.....+ .-..+++++..+++...+.+...+++++++
T Consensus 352 ~g--~~~I~~~dl~~g-~~~~Lt~~~~~-~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~ 406 (429)
T PRK03629 352 GG--QQHIAKQDLATG-GVQVLTDTFLD-ETPSIAPNGTMVIYSSSQGMGSVLNLVSTD 406 (429)
T ss_pred CC--CceEEEEECCCC-CeEEeCCCCCC-CCceECCCCCEEEEEEcCCCceEEEEEECC
Confidence 53 568999998763 33334332212 123455666678877777777778888886
No 42
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=2.9e-14 Score=155.84 Aligned_cols=254 Identities=13% Similarity=0.128 Sum_probs=165.1
Q ss_pred eeEEECCCCCEEEEEEeCCCCc----EEEEEEEECCCCCeeccccc-CccceeEEeeCC-e--EEEEEeCCCCCCceEEE
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDE----IYTVYVIDIETGTPVGKPLV-GVTASVEWAGNE-A--LVYITMDEILRPDKAWL 265 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e----~~~l~v~dl~tg~~~~~~~~-~~~~~~~WspDg-~--l~y~~~~~~~~~~~v~~ 265 (736)
+...++ +++|||+....+.+ ..+||++|.++++.++++.. .....+.||||| + ++|++... ...+||+
T Consensus 140 g~~g~~--~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~--g~~~I~~ 215 (428)
T PRK01029 140 GVPGIS--SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKL--GVPKIFL 215 (428)
T ss_pred CCCccc--cCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccC--CCceEEE
Confidence 334455 99999998765432 46999999999988776443 234569999999 5 66787643 2357999
Q ss_pred EEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEE--eCCCCC--ceEEeeccccc--eeEEEeee
Q 004690 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL--DVSKPE--ELRVLTPRVVG--VDTAASHR 339 (736)
Q Consensus 266 ~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~--dl~~~~--~~~~l~~~~~~--~~~~~s~d 339 (736)
+++.++. ...+..... ....+.|||||++|++.++..+..++|+. +++++. ..+.++....+ ..+.|+||
T Consensus 216 ~~l~~g~--~~~lt~~~g--~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPD 291 (428)
T PRK01029 216 GSLENPA--GKKILALQG--NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPD 291 (428)
T ss_pred EECCCCC--ceEeecCCC--CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCC
Confidence 9998874 334432221 22357899999999998876666678875 555421 25666654322 24679999
Q ss_pred CCEEEEEEcCCCCCCcEEEEEeCCCCC-ceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCcccccc
Q 004690 340 GNHFFITRRSDELFNSELLACPVDNTS-ETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQ 418 (736)
Q Consensus 340 g~~l~~~t~~~~~~~~~l~~~~~~~~~-~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~ 418 (736)
|++|+|.+++++ ..+||.++++..+ ..+.+...........++++++.+++....++..+|+++++.. +..+
T Consensus 292 G~~Laf~s~~~g--~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~--g~~~--- 364 (428)
T PRK01029 292 GTRLVFVSNKDG--RPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT--GRDY--- 364 (428)
T ss_pred CCEEEEEECCCC--CceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC--CCeE---
Confidence 999999998764 4579998876422 2233433322222335666777888888777778899998873 3222
Q ss_pred CCceeeecCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCcEE
Q 004690 419 GGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (736)
Q Consensus 419 ~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~ 468 (736)
.+. .....+.....++++..++|.... .....+|.+|+.+++.+
T Consensus 365 ---~Lt--~~~~~~~~p~wSpDG~~L~f~~~~-~g~~~L~~vdl~~g~~~ 408 (428)
T PRK01029 365 ---QLT--TSPENKESPSWAIDSLHLVYSAGN-SNESELYLISLITKKTR 408 (428)
T ss_pred ---Ecc--CCCCCccceEECCCCCEEEEEECC-CCCceEEEEECCCCCEE
Confidence 222 111122234456677777776553 34468999999877643
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.65 E-value=8.5e-15 Score=157.60 Aligned_cols=225 Identities=14% Similarity=0.054 Sum_probs=147.2
Q ss_pred CceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChh
Q 004690 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (736)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 562 (736)
+-......+...+|..+.+..+.|... .+.|+||++||..+.. ..|...+..|+++||.|+++|+||+|.+...
T Consensus 107 g~~~~~~~~~~~~~~~l~~~~~~p~~~----~~~~~Vl~lHG~~~~~--~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~ 180 (395)
T PLN02652 107 GTRWATSLFYGARRNALFCRSWAPAAG----EMRGILIIIHGLNEHS--GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGL 180 (395)
T ss_pred CceEEEEEEECCCCCEEEEEEecCCCC----CCceEEEEECCchHHH--HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC
Confidence 334455667778888888887777432 3468999999965432 2356677789999999999999999976542
Q ss_pred hhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC---ceeEEEEcCCccchhhh----
Q 004690 563 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVLTT---- 635 (736)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~---~~~a~v~~~p~~d~~~~---- 635 (736)
+. .........+|+.++++++..+. +..++.++||||||.+++.++. +|+ .++++|+.+|.+++...
T Consensus 181 ~~---~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~ 254 (395)
T PLN02652 181 HG---YVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIV 254 (395)
T ss_pred CC---CCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHH
Confidence 21 01111223578888888887542 2247999999999999987764 564 78999999997643210
Q ss_pred ---------c-----cC----CCCCCccc--c----c----------------c-----------ccccccccEEEeecC
Q 004690 636 ---------M-----LD----PTIPLTTA--E----W----------------E-----------VKAQNYPHILVTAGL 664 (736)
Q Consensus 636 ---------~-----~~----~~~p~~~~--~----~----------------~-----------i~~~~~ppvLi~~G~ 664 (736)
. .. ...+.... . + . +.. ...|+||+||.
T Consensus 255 ~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~-I~vPvLIi~G~ 333 (395)
T PLN02652 255 GAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKS-VTVPFMVLHGT 333 (395)
T ss_pred HHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhccc-CCCCEEEEEeC
Confidence 0 00 00000000 0 0 0 111 34569999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCC-hHHHHHHHHHHHHHHHHhcCC
Q 004690 665 NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG-RFERLREAAFTYTFLMRALSM 727 (736)
Q Consensus 665 ~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~a~~~~fl~~~l~~ 727 (736)
+|..||+..++++++++... ..+++++ ++++|..... ..+. ....+.+||..+++.
T Consensus 334 ~D~vvp~~~a~~l~~~~~~~--~k~l~~~---~ga~H~l~~e~~~e~--v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 334 ADRVTDPLASQDLYNEAASR--HKDIKLY---DGFLHDLLFEPEREE--VGRDIIDWMEKRLDL 390 (395)
T ss_pred CCCCCCHHHHHHHHHhcCCC--CceEEEE---CCCeEEeccCCCHHH--HHHHHHHHHHHHhhc
Confidence 99999999999999886543 2344555 4899976332 2222 234478999998863
No 44
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=5.8e-14 Score=154.75 Aligned_cols=203 Identities=15% Similarity=0.122 Sum_probs=143.9
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+..++|||||++|||+....+ ..+||++|+++|+.... ..++....+.||||| .|+|+...+. ..+||++++.+
T Consensus 206 v~~p~wSpDg~~la~~s~~~~--~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g--~~~Iy~~d~~~ 281 (433)
T PRK04922 206 ILSPAWSPDGKKLAYVSFERG--RSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDG--NPEIYVMDLGS 281 (433)
T ss_pred cccccCCCCCCEEEEEecCCC--CcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCC--CceEEEEECCC
Confidence 567899999999999987655 57899999999987655 344445568999999 7888765432 35799999987
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc-cceeEEEeeeCCEEEEEEcC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRS 349 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~t~~ 349 (736)
+. ...+... ......+.|||||++|++.++..+..+||++++.+++ .+.++... ......|+|||+.|++.+..
T Consensus 282 g~--~~~lt~~--~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~ 356 (433)
T PRK04922 282 RQ--LTRLTNH--FGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS-AERLTFQGNYNARASVSPDGKKIAMVHGS 356 (433)
T ss_pred CC--eEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-eEEeecCCCCccCEEECCCCCEEEEEECC
Confidence 63 2333322 1223467899999999999877667789999998887 66665322 22245699999999998775
Q ss_pred CCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 350 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
+ ..++|+.+++++. ....+.....+. -..++++++.+++.....+...|++++++
T Consensus 357 ~--~~~~I~v~d~~~g-~~~~Lt~~~~~~-~p~~spdG~~i~~~s~~~g~~~L~~~~~~ 411 (433)
T PRK04922 357 G--GQYRIAVMDLSTG-SVRTLTPGSLDE-SPSFAPNGSMVLYATREGGRGVLAAVSTD 411 (433)
T ss_pred C--CceeEEEEECCCC-CeEECCCCCCCC-CceECCCCCEEEEEEecCCceEEEEEECC
Confidence 4 3578999998763 333333322222 22455566678877777777888888876
No 45
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.62 E-value=2.1e-15 Score=155.53 Aligned_cols=194 Identities=20% Similarity=0.275 Sum_probs=131.6
Q ss_pred CCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCC-----Cc----hhHHHHHHCCcEEEEEcccCCCCCChhhhh
Q 004690 495 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-----FN----SSRLSLLDRGFIFAIAQIRGGGELGRQWYE 565 (736)
Q Consensus 495 dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~-----~~----~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 565 (736)
||++|.+.++.| +. ..+++.|+||..++ |+...... .. .....|+++||+|++.|.||.|+++..|..
T Consensus 1 DGv~L~adv~~P-~~-~~~~~~P~il~~tp-Y~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~ 77 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-DGGGPFPVILTRTP-YGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP 77 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEES-STCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T
T ss_pred CCCEEEEEEEec-CC-CCCCcccEEEEccC-cCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc
Confidence 799999999999 33 44689999999988 54321000 01 111239999999999999999998877754
Q ss_pred ccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh-hcc-------
Q 004690 566 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-TML------- 637 (736)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~-~~~------- 637 (736)
. ..+..+|..++|+|+.++.+.+ .||+++|.|++|..+..+|.+.|..++|++..++..|+.. ...
T Consensus 78 ~-----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~ 151 (272)
T PF02129_consen 78 M-----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRL 151 (272)
T ss_dssp T-----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBC
T ss_pred C-----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccc
Confidence 2 4567799999999999998765 6999999999999999999988888999999999888654 110
Q ss_pred -----------------CCCCCCc---c-----------------cc----------------cc---cc---ccccccE
Q 004690 638 -----------------DPTIPLT---T-----------------AE----------------WE---VK---AQNYPHI 658 (736)
Q Consensus 638 -----------------~~~~p~~---~-----------------~~----------------~~---i~---~~~~ppv 658 (736)
....+.. . .. |. .. .....|+
T Consensus 152 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~ 231 (272)
T PF02129_consen 152 GFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPV 231 (272)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEE
T ss_pred cchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCE
Confidence 0000000 0 00 00 11 1245679
Q ss_pred EEeecCCCCCCCChHHHHHHHHHHhcC-CCCCeEEEEecCCCCcC
Q 004690 659 LVTAGLNDPRVMYSEPAKFVAKLREMK-TDDNILLFKCELGAGHF 702 (736)
Q Consensus 659 Li~~G~~D~~Vp~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~gH~ 702 (736)
|+++|..|.... ..+.+.+++|++.+ .+.++++- ..+|.
T Consensus 232 l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liig----pw~H~ 271 (272)
T PF02129_consen 232 LIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIG----PWTHG 271 (272)
T ss_dssp EEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEE----SESTT
T ss_pred EEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEe----CCCCC
Confidence 999999997777 89999999998887 45455444 35674
No 46
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.62 E-value=1.3e-14 Score=150.30 Aligned_cols=222 Identities=18% Similarity=0.235 Sum_probs=145.0
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhc
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
.+..+.+.||..+.+....+... +..+||++||...... .|...+..|..+||.|++.|.||+|.+.+ .+.
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~-----~~g~Vvl~HG~~Eh~~--ry~~la~~l~~~G~~V~~~D~RGhG~S~r--~~r 80 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEP-----PKGVVVLVHGLGEHSG--RYEELADDLAARGFDVYALDLRGHGRSPR--GQR 80 (298)
T ss_pred ccceeecCCCceEEEEeecCCCC-----CCcEEEEecCchHHHH--HHHHHHHHHHhCCCEEEEecCCCCCCCCC--CCc
Confidence 44557788999887775544332 2379999999655433 36667789999999999999999998864 111
Q ss_pred cccccCcChHHHHHHHHHHHHHcCC--CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh---h------
Q 004690 567 GKFLKKKNTFTDFIACAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT---T------ 635 (736)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~--~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~---~------ 635 (736)
|. ...|+|+++.++.+++.-. .-..+++++||||||++++.++.+++..+.++|+.+|++.+.. .
T Consensus 81 g~----~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~ 156 (298)
T COG2267 81 GH----VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARL 156 (298)
T ss_pred CC----chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHH
Confidence 11 2235555555554443311 1236899999999999999999999999999999999988651 0
Q ss_pred c------cCCCCCCcc-------cc-----------cc---------------------cc-------ccccccEEEeec
Q 004690 636 M------LDPTIPLTT-------AE-----------WE---------------------VK-------AQNYPHILVTAG 663 (736)
Q Consensus 636 ~------~~~~~p~~~-------~~-----------~~---------------------i~-------~~~~ppvLi~~G 663 (736)
. ..+..+... .. |. .. ....-|+||++|
T Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g 236 (298)
T COG2267 157 ALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQG 236 (298)
T ss_pred hcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEec
Confidence 0 001111111 00 00 11 113457999999
Q ss_pred CCCCCCC-ChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCC-hHHHHHHHHHHHHHHHHhcC
Q 004690 664 LNDPRVM-YSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG-RFERLREAAFTYTFLMRALS 726 (736)
Q Consensus 664 ~~D~~Vp-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~a~~~~fl~~~l~ 726 (736)
++|.+|+ .+.+.++++++.... .+++.+ +|+.|..... ...+.....++.+||.+++.
T Consensus 237 ~~D~vv~~~~~~~~~~~~~~~~~--~~~~~~---~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 237 GDDRVVDNVEGLARFFERAGSPD--KELKVI---PGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CCCccccCcHHHHHHHHhcCCCC--ceEEec---CCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999999 677777776654433 344555 4999965322 22123345567889988764
No 47
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.62 E-value=2.8e-15 Score=148.99 Aligned_cols=190 Identities=17% Similarity=0.160 Sum_probs=108.0
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHH-HHHHCCcEEEEEcccC------CCCCChhhhhccccccCc-ChHHHH------
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRL-SLLDRGFIFAIAQIRG------GGELGRQWYENGKFLKKK-NTFTDF------ 579 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~d~RG------~g~~g~~~~~~~~~~~~~-~~~~D~------ 579 (736)
...|+||++||. |... ..+..... .+......++.++-+- +|.....|++........ ...+++
T Consensus 12 ~~~~lvi~LHG~-G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 12 KAKPLVILLHGY-GDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp T-SEEEEEE--T-TS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCceEEEEECCC-CCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 467999999993 4332 11111111 1122467777765431 122123787643222211 122333
Q ss_pred -HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCccccccccccccccE
Q 004690 580 -IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHI 658 (736)
Q Consensus 580 -~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppv 658 (736)
.+.++...+.+ ++++||++.|+|+||.+++.++.++|+.++++|+.+|.+........ . .......|+
T Consensus 90 l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~--~--------~~~~~~~pi 158 (216)
T PF02230_consen 90 LDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELED--R--------PEALAKTPI 158 (216)
T ss_dssp HHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHC--C--------HCCCCTS-E
T ss_pred HHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccc--c--------ccccCCCcE
Confidence 33333334444 88999999999999999999999999999999999997654221110 0 111235679
Q ss_pred EEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhc
Q 004690 659 LVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 725 (736)
Q Consensus 659 Li~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l 725 (736)
|++||.+|++||...+++.++.|++.+.++++..| ++.||.... ++..++.+||.+++
T Consensus 159 ~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~---~g~gH~i~~------~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 159 LIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY---PGGGHEISP------EELRDLREFLEKHI 216 (216)
T ss_dssp EEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE---TT-SSS--H------HHHHHHHHHHHHH-
T ss_pred EEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc---CCCCCCCCH------HHHHHHHHHHhhhC
Confidence 99999999999999999999999999876554444 589997632 24445778998764
No 48
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=5.6e-13 Score=146.37 Aligned_cols=242 Identities=12% Similarity=0.087 Sum_probs=158.8
Q ss_pred CEEEEEEeCCC-CcEEEEEEEECCCCCeecccc-cCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEE
Q 004690 203 KLVAYAEDTKG-DEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLY 279 (736)
Q Consensus 203 ~~la~~~~~~G-~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~ 279 (736)
++|||.....+ ...++|+++|.+++..+..+. ......++||||| .|+|++.... ..++|++++.++. ...+.
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g--~~~i~i~dl~~G~--~~~l~ 239 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGA--VRQVA 239 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCC--eEEcc
Confidence 88999987543 336799999999887665432 2345669999999 8999875322 3579999998763 33333
Q ss_pred eecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccc-eeEEEeeeCCEEEEEEcCCCCCCcEEE
Q 004690 280 HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELL 358 (736)
Q Consensus 280 ~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~t~~~~~~~~~l~ 358 (736)
... .....+.|||||++|++.....+..+||++|+++++ .+.++..... ....|+|||++|+|.+++.+ ..+||
T Consensus 240 ~~~--~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g--~~~Iy 314 (429)
T PRK03629 240 SFP--RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAG--RPQVY 314 (429)
T ss_pred CCC--CCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC-EEEccCCCCCcCceEECCCCCEEEEEeCCCC--CceEE
Confidence 222 122357899999999998766666789999999887 7777654322 34569999999999998763 46899
Q ss_pred EEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCcc
Q 004690 359 ACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESV 438 (736)
Q Consensus 359 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~ 438 (736)
.+++++. ....+...........++++++.+++....++...+++++++. +... .+. .. +.......+
T Consensus 315 ~~d~~~g-~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~--g~~~------~Lt--~~-~~~~~p~~S 382 (429)
T PRK03629 315 KVNINGG-APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--GGVQ------VLT--DT-FLDETPSIA 382 (429)
T ss_pred EEECCCC-CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCC--CCeE------EeC--CC-CCCCCceEC
Confidence 9998763 3333433322222234566677888877777777888888863 3222 222 11 111233456
Q ss_pred cCcceEEEEeccCCCCcEEEEEECCCCc
Q 004690 439 FSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 439 ~~~~~~~~~~ss~~~P~~~~~~d~~~~~ 466 (736)
+|+..+.+.... ..-..++.+++..+.
T Consensus 383 pDG~~i~~~s~~-~~~~~l~~~~~~G~~ 409 (429)
T PRK03629 383 PNGTMVIYSSSQ-GMGSVLNLVSTDGRF 409 (429)
T ss_pred CCCCEEEEEEcC-CCceEEEEEECCCCC
Confidence 677776665442 223457777875544
No 49
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.59 E-value=7.2e-15 Score=136.27 Aligned_cols=145 Identities=18% Similarity=0.250 Sum_probs=107.0
Q ss_pred EEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcE
Q 004690 518 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 597 (736)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 597 (736)
+||++||+.+. ...|...+..|+++||.|+.+|+||.+.... . .++.++++++.+... ++++|
T Consensus 1 ~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--~------------~~~~~~~~~~~~~~~-~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGS--RRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--A------------DAVERVLADIRAGYP-DPDRI 63 (145)
T ss_dssp EEEEECTTTTT--THHHHHHHHHHHHTTEEEEEESCTTSTTSHH--S------------HHHHHHHHHHHHHHC-TCCEE
T ss_pred CEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEEecCCCCccch--h------------HHHHHHHHHHHhhcC-CCCcE
Confidence 58999996554 3347778889999999999999999886521 0 255555665543222 88999
Q ss_pred EEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCccccccccccccccEEEeecCCCCCCCChHHHHH
Q 004690 598 CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAGLNDPRVMYSEPAKF 677 (736)
Q Consensus 598 ~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~ 677 (736)
+++|+|+||.++..++.+. ..++++|+..|+.+. ..+ .. ...|+|+++|++|+.+|+++..++
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~~-~~~--------------~~-~~~pv~~i~g~~D~~~~~~~~~~~ 126 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPDS-EDL--------------AK-IRIPVLFIHGENDPLVPPEQVRRL 126 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESSGC-HHH--------------TT-TTSEEEEEEETT-SSSHHHHHHHH
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCccch-hhh--------------hc-cCCcEEEEEECCCCcCCHHHHHHH
Confidence 9999999999999999987 688999999995331 111 11 234699999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEecCCCCcC
Q 004690 678 VAKLREMKTDDNILLFKCELGAGHF 702 (736)
Q Consensus 678 ~~~l~~~~~~~~~~~~~~~~~~gH~ 702 (736)
+++++ .+.+++.+ ++++|+
T Consensus 127 ~~~~~---~~~~~~~i---~g~~H~ 145 (145)
T PF12695_consen 127 YEALP---GPKELYII---PGAGHF 145 (145)
T ss_dssp HHHHC---SSEEEEEE---TTS-TT
T ss_pred HHHcC---CCcEEEEe---CCCcCc
Confidence 99887 23344444 599995
No 50
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.59 E-value=7e-14 Score=158.45 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=106.3
Q ss_pred EeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCC--CCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccc
Q 004690 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN--DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 568 (736)
Q Consensus 491 ~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~ 568 (736)
+++.||++|.+.++.|++. ++.|+||++||...... ..........|+++||+|+++|+||.|+++..+...+
T Consensus 1 i~~~DG~~L~~~~~~P~~~----~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~- 75 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGG----GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG- 75 (550)
T ss_pred CcCCCCCEEEEEEEecCCC----CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-
Confidence 4678999999999988753 47899999998332221 0111224567899999999999999998876543211
Q ss_pred cccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh
Q 004690 569 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 634 (736)
Q Consensus 569 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~ 634 (736)
....+|+.++++|+.++.+.+ .+|+++|+|+||.+++.++..+|+.++|+|+.+++.|+.+
T Consensus 76 ----~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 76 ----SDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred ----cccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 456799999999999998876 6999999999999999999999999999999999887653
No 51
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.59 E-value=2e-14 Score=140.05 Aligned_cols=181 Identities=20% Similarity=0.259 Sum_probs=119.4
Q ss_pred eEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCCh--hhhhccccccCcChH
Q 004690 500 PICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGR--QWYENGKFLKKKNTF 576 (736)
Q Consensus 500 ~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~--~~~~~~~~~~~~~~~ 576 (736)
.+.++.|++. +.++.|+||.+||+.+......-...+..|+++ ||+|+.|+......... .|.. .....+....
T Consensus 2 ~Y~lYvP~~~--~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d~ 78 (220)
T PF10503_consen 2 SYRLYVPPGA--PRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGDV 78 (220)
T ss_pred cEEEecCCCC--CCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccch
Confidence 4567778765 235789999999976654321111223467775 99999998643222223 3433 2122233445
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccch--------hhhccCCCCCCcccc-
Q 004690 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV--------LTTMLDPTIPLTTAE- 647 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~--------~~~~~~~~~p~~~~~- 647 (736)
..+.+.+++++.+..+|++||.+.|+|+||.|+..++..+||+|+|+...++..-- ...|.....+ ....
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~-~p~~~ 157 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRP-APAAA 157 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCC-ChHHH
Confidence 66778899999999999999999999999999999999999999998887764211 1112111111 0000
Q ss_pred cc--ccc--cccccEEEeecCCCCCCCChHHHHHHHHHHhc
Q 004690 648 WE--VKA--QNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 684 (736)
Q Consensus 648 ~~--i~~--~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~ 684 (736)
+. ... ....|++|+||..|..|.+..+.++.+.+...
T Consensus 158 ~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 158 WGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred HHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 00 111 11236999999999999999999999887654
No 52
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.58 E-value=4.5e-15 Score=151.87 Aligned_cols=200 Identities=19% Similarity=0.176 Sum_probs=112.0
Q ss_pred CCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcC----CCC--------C----CchhHHHHHHC
Q 004690 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC----NDP--------A----FNSSRLSLLDR 544 (736)
Q Consensus 481 ~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~----~~~--------~----~~~~~~~l~~~ 544 (736)
.++|+.|++.+.+.++..++++++.|++. .++.|+||++||-.+.. ..+ . -......|+++
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~---~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~ 159 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGA---KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR 159 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCC---CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC
Confidence 45789999999999999999999999875 47899999999832221 000 0 11235689999
Q ss_pred CcEEEEEcccCCCCCChhhh-----------------hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHH
Q 004690 545 GFIFAIAQIRGGGELGRQWY-----------------ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGL 607 (736)
Q Consensus 545 G~~v~~~d~RG~g~~g~~~~-----------------~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~ 607 (736)
||+|+++|.+|-||.+..-. ..|....+...++| ..+++||..+..+|++||+++|+||||+
T Consensus 160 GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~dd-mr~lDfL~slpeVD~~RIG~~GfSmGg~ 238 (390)
T PF12715_consen 160 GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDD-MRALDFLASLPEVDPDRIGCMGFSMGGY 238 (390)
T ss_dssp TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHH-HHHHHHHCT-TTEEEEEEEEEEEGGGHH
T ss_pred CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHH-HHHHHHHhcCcccCccceEEEeecccHH
Confidence 99999999999887654111 01111111233444 5699999999999999999999999999
Q ss_pred HHHHHHHhCCCceeEEEEcCCccchhh---hccCC------C--------CCCcccccc---cccc-ccccEEEeecCCC
Q 004690 608 LIGAVLNMRPDLFKAAVAAVPFVDVLT---TMLDP------T--------IPLTTAEWE---VKAQ-NYPHILVTAGLND 666 (736)
Q Consensus 608 la~~~~~~~p~~~~a~v~~~p~~d~~~---~~~~~------~--------~p~~~~~~~---i~~~-~~ppvLi~~G~~D 666 (736)
.+..+++..+ +++|+|+.+-+.-+.. .|..+ . +|-....++ |... ...|+|++.|..|
T Consensus 239 ~a~~LaALDd-RIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~D 317 (390)
T PF12715_consen 239 RAWWLAALDD-RIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKD 317 (390)
T ss_dssp HHHHHHHH-T-T--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-H
T ss_pred HHHHHHHcch-hhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcc
Confidence 9999999865 6677665443322211 12100 0 111111111 3333 4457999999999
Q ss_pred CCCCChHHHHHHHHHHhcCCCCCe
Q 004690 667 PRVMYSEPAKFVAKLREMKTDDNI 690 (736)
Q Consensus 667 ~~Vp~~~~~~~~~~l~~~~~~~~~ 690 (736)
..+|. .++ +-+..+.+.++
T Consensus 318 klf~i--V~~---AY~~~~~p~n~ 336 (390)
T PF12715_consen 318 KLFPI--VRR---AYAIMGAPDNF 336 (390)
T ss_dssp HHHHH--HHH---HHHHTT-GGGE
T ss_pred cccHH--HHH---HHHhcCCCcce
Confidence 76643 223 33345555444
No 53
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.5e-12 Score=143.06 Aligned_cols=239 Identities=14% Similarity=0.143 Sum_probs=157.1
Q ss_pred CEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEe
Q 004690 203 KLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYH 280 (736)
Q Consensus 203 ~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~ 280 (736)
.+|||....++ ..+|+++|.++...+.. ........++||||| .|+|++... ...+||++++.++. ...+..
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~--~~~~I~~~dl~~g~--~~~l~~ 237 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFES--KKPVVYVHDLATGR--RRVVAN 237 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccC--CCcEEEEEECCCCC--EEEeec
Confidence 67999986544 57899999987665544 223345569999999 899987642 23569999998773 233322
Q ss_pred ecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccc-ceeEEEeeeCCEEEEEEcCCCCCCcEEEE
Q 004690 281 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 359 (736)
Q Consensus 281 ~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~~l~~ 359 (736)
.. .....+.|||||+.|++..+..+..+||.+|+.++. .+.++.... .....|+|||++|+|.+++.+ ..+||.
T Consensus 238 ~~--g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g--~~~Iy~ 312 (427)
T PRK02889 238 FK--GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGG--APQIYR 312 (427)
T ss_pred CC--CCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCC--CcEEEE
Confidence 11 223467899999999998877777899999998876 677765432 224569999999999988754 468999
Q ss_pred EeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCccc
Q 004690 360 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVF 439 (736)
Q Consensus 360 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~ 439 (736)
+++++. ..+.+........-..++++++++++....++...|++++++. +..+ .+. ... .......++
T Consensus 313 ~~~~~g-~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~--g~~~------~lt--~~~-~~~~p~~sp 380 (427)
T PRK02889 313 MPASGG-AAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT--GQVT------ALT--DTT-RDESPSFAP 380 (427)
T ss_pred EECCCC-ceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC--CCeE------Ecc--CCC-CccCceECC
Confidence 998763 3333432222122235666777888777777767899998863 2221 121 111 112344566
Q ss_pred CcceEEEEeccCCCCcEEEEEECCCC
Q 004690 440 SSRILRFHYSSLRTPPSVYDYDMDMG 465 (736)
Q Consensus 440 ~~~~~~~~~ss~~~P~~~~~~d~~~~ 465 (736)
++..++|....-.. ..+|.++...+
T Consensus 381 dg~~l~~~~~~~g~-~~l~~~~~~g~ 405 (427)
T PRK02889 381 NGRYILYATQQGGR-SVLAAVSSDGR 405 (427)
T ss_pred CCCEEEEEEecCCC-EEEEEEECCCC
Confidence 77777776654332 46777777443
No 54
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.57 E-value=5.3e-14 Score=146.90 Aligned_cols=218 Identities=18% Similarity=0.224 Sum_probs=130.5
Q ss_pred CceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChh
Q 004690 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (736)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 562 (736)
++..+++.++-. |..|++++..|+. +++.|+||+.-| ..+-....+......|+.+|++++.+|.+|.|+...
T Consensus 162 ~~~i~~v~iP~e-g~~I~g~LhlP~~----~~p~P~VIv~gG-lDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~- 234 (411)
T PF06500_consen 162 DYPIEEVEIPFE-GKTIPGYLHLPSG----EKPYPTVIVCGG-LDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK- 234 (411)
T ss_dssp SSEEEEEEEEET-TCEEEEEEEESSS----SS-EEEEEEE---TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT-
T ss_pred CCCcEEEEEeeC-CcEEEEEEEcCCC----CCCCCEEEEeCC-cchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc-
Confidence 566788988875 4789999888874 378899888754 333222222222336789999999999999987532
Q ss_pred hhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccc-hhhh-ccCCC
Q 004690 563 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD-VLTT-MLDPT 640 (736)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d-~~~~-~~~~~ 640 (736)
|. . ......=..++++||.+.+++|.+||+++|.|+||+.+..+|..++++++|+|+..|++. ++.. .....
T Consensus 235 ~~----l--~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~ 308 (411)
T PF06500_consen 235 WP----L--TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQR 308 (411)
T ss_dssp T-----S---S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTT
T ss_pred CC----C--CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhc
Confidence 21 1 111223356889999999999999999999999999999999877889999999888543 2210 00001
Q ss_pred CCCc----------------------ccccc------c-cccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeE
Q 004690 641 IPLT----------------------TAEWE------V-KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 691 (736)
Q Consensus 641 ~p~~----------------------~~~~~------i-~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~ 691 (736)
.|.. ...|. + ......|+|.+.|.+|+++|.+++.-++. .+.+.+..
T Consensus 309 ~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~----~s~~gk~~ 384 (411)
T PF06500_consen 309 VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAE----SSTDGKAL 384 (411)
T ss_dssp S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHH----TBTT-EEE
T ss_pred CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHh----cCCCCcee
Confidence 1100 00111 2 22355689999999999999888755543 34444555
Q ss_pred EEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhc
Q 004690 692 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 725 (736)
Q Consensus 692 ~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l 725 (736)
.++. +.=|.+ -.. ....++.||++.|
T Consensus 385 ~~~~--~~~~~g---y~~---al~~~~~Wl~~~l 410 (411)
T PF06500_consen 385 RIPS--KPLHMG---YPQ---ALDEIYKWLEDKL 410 (411)
T ss_dssp EE-S--SSHHHH---HHH---HHHHHHHHHHHHH
T ss_pred ecCC--Cccccc---hHH---HHHHHHHHHHHhc
Confidence 6651 222532 122 3444789999876
No 55
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.2e-12 Score=144.35 Aligned_cols=243 Identities=11% Similarity=0.118 Sum_probs=159.1
Q ss_pred CCEEEEEEeCCC--CcEEEEEEEECCCCCeeccc-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEE
Q 004690 202 NKLVAYAEDTKG--DEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDIC 277 (736)
Q Consensus 202 G~~la~~~~~~G--~e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~ 277 (736)
+++|||.....+ ...++|+++|.+++....++ .......++||||| .|+|++... ...+||++++.++. ...
T Consensus 167 ~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~--~~~~l~~~dl~~g~--~~~ 242 (433)
T PRK04922 167 WTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFER--GRSAIYVQDLATGQ--REL 242 (433)
T ss_pred cceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCC--CCcEEEEEECCCCC--EEE
Confidence 567899876433 34678999999887766543 23335569999999 899987643 24579999998763 333
Q ss_pred EEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccc-ceeEEEeeeCCEEEEEEcCCCCCCcE
Q 004690 278 LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSE 356 (736)
Q Consensus 278 ~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~~ 356 (736)
+.... .....+.|||||++|++..+..+..+||++|+++++ .+.++.... .....|+|||++|+|.+++.+ ..+
T Consensus 243 l~~~~--g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~-~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g--~~~ 317 (433)
T PRK04922 243 VASFR--GINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ-LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGG--RPQ 317 (433)
T ss_pred eccCC--CCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC-eEECccCCCCccceEECCCCCEEEEEECCCC--Cce
Confidence 33221 223357899999999988776667899999999887 777765432 234569999999999998764 458
Q ss_pred EEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCC
Q 004690 357 LLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE 436 (736)
Q Consensus 357 l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~ 436 (736)
||.+++++. ..+.+...+....-..++++++.+++....++..+|+++++.. +..+. +. ... ......
T Consensus 318 iy~~dl~~g-~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~--g~~~~------Lt--~~~-~~~~p~ 385 (433)
T PRK04922 318 IYRVAASGG-SAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLST--GSVRT------LT--PGS-LDESPS 385 (433)
T ss_pred EEEEECCCC-CeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCC--CCeEE------CC--CCC-CCCCce
Confidence 999998763 3333433322222235566677888776666666889998863 32212 21 111 112234
Q ss_pred cccCcceEEEEeccCCCCcEEEEEECCCCc
Q 004690 437 SVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 437 ~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~ 466 (736)
.++++..+.|.... ..-..+|.+++.++.
T Consensus 386 ~spdG~~i~~~s~~-~g~~~L~~~~~~g~~ 414 (433)
T PRK04922 386 FAPNGSMVLYATRE-GGRGVLAAVSTDGRV 414 (433)
T ss_pred ECCCCCEEEEEEec-CCceEEEEEECCCCc
Confidence 56677777666554 233578888886554
No 56
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.56 E-value=6.4e-15 Score=146.18 Aligned_cols=169 Identities=22% Similarity=0.292 Sum_probs=115.9
Q ss_pred EEEecCCCCcCCCCC-CchhHHHHHH-CCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHc---CCCC
Q 004690 519 LLYGYGSYEICNDPA-FNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CYCT 593 (736)
Q Consensus 519 vl~~hGg~~~~~~~~-~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d 593 (736)
||++|||.+...... .......|++ .|++|+.+|||-..+. .-...++|+.++++|+.++ ...|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-----------~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-----------PFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-----------STTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-----------cccccccccccceeeecccccccccc
Confidence 799999977655433 3334556775 8999999999976542 2245689999999999987 2368
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCC----ceeEEEEcCCccchhh-----h-----ccC-CCCCCcccc-----c-----
Q 004690 594 KEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLT-----T-----MLD-PTIPLTTAE-----W----- 648 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~~~~~~p~----~~~a~v~~~p~~d~~~-----~-----~~~-~~~p~~~~~-----~----- 648 (736)
+++|+++|+|+||.|++.++.+..+ .++++++.+|++|+.. . ..+ +.++..... |
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSD 149 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGG
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccccccc
Confidence 8999999999999999988864222 4899999999987711 1 011 111000000 0
Q ss_pred ----ccc-----cc-ccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCC
Q 004690 649 ----EVK-----AQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 703 (736)
Q Consensus 649 ----~i~-----~~-~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 703 (736)
.++ .. ..||++|++|++|..+ .++.+|+++|++.|+++++++++ +.+|.+
T Consensus 150 ~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~---g~~H~f 209 (211)
T PF07859_consen 150 RDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYP---GMPHGF 209 (211)
T ss_dssp TTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEET---TEETTG
T ss_pred ccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEEC---CCeEEe
Confidence 011 11 5789999999999765 58999999999999888766665 999975
No 57
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.56 E-value=2.8e-13 Score=139.96 Aligned_cols=220 Identities=17% Similarity=0.164 Sum_probs=151.1
Q ss_pred eEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCC---CCCCchhHHHHHH-CCcEEEEEcccCCCCCC
Q 004690 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN---DPAFNSSRLSLLD-RGFIFAIAQIRGGGELG 560 (736)
Q Consensus 485 ~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~---~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g 560 (736)
....+.+.. ...++..++.|... ....+.|+|||+|||.+.-. .+.|......++. .+.+|+.+|||-..|.
T Consensus 62 ~~~dv~~~~--~~~l~vRly~P~~~-~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh- 137 (336)
T KOG1515|consen 62 TSKDVTIDP--FTNLPVRLYRPTSS-SSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH- 137 (336)
T ss_pred eeeeeEecC--CCCeEEEEEcCCCC-CcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC-
Confidence 345555544 34577888888776 43368999999999865433 4556666667755 5999999999977653
Q ss_pred hhhhhccccccCcChHHHHHHHHHHHHHc----CCCCCCcEEEEEeChHHHHHHHHHHhC------CCceeEEEEcCCcc
Q 004690 561 RQWYENGKFLKKKNTFTDFIACAEYLIKN----CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFV 630 (736)
Q Consensus 561 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~ri~~~G~S~GG~la~~~~~~~------p~~~~a~v~~~p~~ 630 (736)
.-+..++|..+|+.|+.++ ..+|++||+|+|-|+||.+|..++.+. +-.+++.|+.+|++
T Consensus 138 ----------~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 138 ----------PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred ----------CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 2356789999999999886 458999999999999999998877542 34689999999987
Q ss_pred chhhhcc-------CC---------------CCCCcccccc------cc--------ccccccEEEeecCCCCCCCChHH
Q 004690 631 DVLTTML-------DP---------------TIPLTTAEWE------VK--------AQNYPHILVTAGLNDPRVMYSEP 674 (736)
Q Consensus 631 d~~~~~~-------~~---------------~~p~~~~~~~------i~--------~~~~ppvLi~~G~~D~~Vp~~~~ 674 (736)
....... +. .+|......+ +. -...||+||+.++.|... .+.
T Consensus 208 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~ 285 (336)
T KOG1515|consen 208 QGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEG 285 (336)
T ss_pred CCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhh
Confidence 6532110 00 0010000000 11 126788999999999665 788
Q ss_pred HHHHHHHHhcCCCCCeEEEEecCCCCcCCC--CC-hHHHHHHHHHHHHHHHH
Q 004690 675 AKFVAKLREMKTDDNILLFKCELGAGHFSK--SG-RFERLREAAFTYTFLMR 723 (736)
Q Consensus 675 ~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~--~~-~~~~~~~~a~~~~fl~~ 723 (736)
..++++|++.|..++.+.+ +++.|++. .+ .....+....+.+|+.+
T Consensus 286 ~~Y~~~Lkk~Gv~v~~~~~---e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 286 LAYAEKLKKAGVEVTLIHY---EDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred HHHHHHHHHcCCeEEEEEE---CCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 9999999999998874444 48999763 12 12333334445666654
No 58
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.56 E-value=2e-12 Score=142.59 Aligned_cols=243 Identities=11% Similarity=0.100 Sum_probs=158.2
Q ss_pred CCEEEEEEeCCCC-cEEEEEEEECCCCCeeccc-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEE
Q 004690 202 NKLVAYAEDTKGD-EIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICL 278 (736)
Q Consensus 202 G~~la~~~~~~G~-e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~ 278 (736)
..+|||.....+. ..++|+++|.++...+.++ .......+.||||| .|+|++... ...+||++++.++. ...+
T Consensus 182 ~~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~--g~~~L~~~dl~tg~--~~~l 257 (448)
T PRK04792 182 LTRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFEN--RKAEIFVQDIYTQV--REKV 257 (448)
T ss_pred cCEEEEEEeeCCCCCceEEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecC--CCcEEEEEECCCCC--eEEe
Confidence 4788898775543 3579999999887665442 23345569999999 899988643 23579999998763 3333
Q ss_pred EeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccc-ceeEEEeeeCCEEEEEEcCCCCCCcEE
Q 004690 279 YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSEL 357 (736)
Q Consensus 279 ~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~~l 357 (736)
.... .....+.|||||++|++.....+..+||++|+++++ .+.++.... .....|+|||++|+|.+++++ +.+|
T Consensus 258 t~~~--g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~-~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g--~~~I 332 (448)
T PRK04792 258 TSFP--GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA-LTRITRHRAIDTEPSWHPDGKSLIFTSERGG--KPQI 332 (448)
T ss_pred cCCC--CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC-eEECccCCCCccceEECCCCCEEEEEECCCC--CceE
Confidence 3222 222357899999999998777677899999999887 777765432 234569999999999988764 5689
Q ss_pred EEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCc
Q 004690 358 LACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSES 437 (736)
Q Consensus 358 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~ 437 (736)
|.+++++. ..+.+........-..++++++.+++....++..+|++++++. +....++. .... .....
T Consensus 333 y~~dl~~g-~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~--g~~~~lt~--------~~~d-~~ps~ 400 (448)
T PRK04792 333 YRVNLASG-KVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLET--GAMQVLTS--------TRLD-ESPSV 400 (448)
T ss_pred EEEECCCC-CEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCC--CCeEEccC--------CCCC-CCceE
Confidence 99998763 3333432222211235666777888877777767788888763 32222211 1111 12245
Q ss_pred ccCcceEEEEeccCCCCcEEEEEECCCCc
Q 004690 438 VFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 438 ~~~~~~~~~~~ss~~~P~~~~~~d~~~~~ 466 (736)
++++..++|+...- .-..+|.++...+.
T Consensus 401 spdG~~I~~~~~~~-g~~~l~~~~~~G~~ 428 (448)
T PRK04792 401 APNGTMVIYSTTYQ-GKQVLAAVSIDGRF 428 (448)
T ss_pred CCCCCEEEEEEecC-CceEEEEEECCCCc
Confidence 66777776665432 23467888775443
No 59
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=2e-12 Score=142.85 Aligned_cols=251 Identities=9% Similarity=0.106 Sum_probs=161.5
Q ss_pred EeeEEECCCCCEEEEEEeCC--CCcEEEEEEEECCCCCeeccc-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTK--GDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~--G~e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
+.+.... ..++|||..... +++.++|+++|.+++..+... .......+.||||| +|+|++... ...+||++++
T Consensus 154 ltg~~g~-f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~--~~~~l~~~~l 230 (430)
T PRK00178 154 LTGIKGA-FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQ--KRPRIFVQNL 230 (430)
T ss_pred HhCCCcc-ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCC--CCCEEEEEEC
Confidence 4444433 667899987543 345789999999988765542 23334568999999 899987643 2347999999
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccc-ceeEEEeeeCCEEEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITR 347 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t 347 (736)
.++. ...+.... .....+.|||||++|++..+..+..+||++|+++++ .+.++.... ...+.|+|||++|+|.+
T Consensus 231 ~~g~--~~~l~~~~--g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~~spDg~~i~f~s 305 (430)
T PRK00178 231 DTGR--REQITNFE--GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ-LSRVTNHPAIDTEPFWGKDGRTLYFTS 305 (430)
T ss_pred CCCC--EEEccCCC--CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCC-eEEcccCCCCcCCeEECCCCCEEEEEE
Confidence 8773 33333222 122357899999999998877677899999999887 777765432 23467999999999999
Q ss_pred cCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecC
Q 004690 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID 427 (736)
Q Consensus 348 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~ 427 (736)
++++ ..+||.+++++. ..+.+...........++++++.+++....++...|+++++.. +..+ .+. .
T Consensus 306 ~~~g--~~~iy~~d~~~g-~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t--g~~~------~lt--~ 372 (430)
T PRK00178 306 DRGG--KPQIYKVNVNGG-RAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR--GSVR------ILT--D 372 (430)
T ss_pred CCCC--CceEEEEECCCC-CEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCC--CCEE------Ecc--C
Confidence 8764 568999998763 3333432222222235566777888887766766788888763 3222 222 1
Q ss_pred cccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCc
Q 004690 428 PVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 428 ~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~ 466 (736)
..... ....++++..+.|+..... -..+|.+++..+.
T Consensus 373 ~~~~~-~p~~spdg~~i~~~~~~~g-~~~l~~~~~~g~~ 409 (430)
T PRK00178 373 TSLDE-SPSVAPNGTMLIYATRQQG-RGVLMLVSINGRV 409 (430)
T ss_pred CCCCC-CceECCCCCEEEEEEecCC-ceEEEEEECCCCc
Confidence 11111 2245567777766544222 2357777775443
No 60
>PRK10985 putative hydrolase; Provisional
Probab=99.55 E-value=9e-14 Score=147.24 Aligned_cols=136 Identities=16% Similarity=0.121 Sum_probs=91.4
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhc
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
++..++..||..+.......+ ....+.|+||++||..+..........+..|+++||.|+++|+||+|+......+
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~---~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~- 107 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDP---AQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR- 107 (324)
T ss_pred ceeEEECCCCCEEEEecCCCC---ccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc-
Confidence 344466778877654422111 1123579999999976654333334456788999999999999998865322111
Q ss_pred cccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc--eeEEEEcCCccc
Q 004690 567 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVD 631 (736)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~--~~a~v~~~p~~d 631 (736)
.......+|+.++++++.++.. ..++.++||||||.+++.++.++++. +.++|+.++..+
T Consensus 108 ---~~~~~~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 108 ---IYHSGETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred ---eECCCchHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 1112346899999999987632 36799999999999888777776543 677777766654
No 61
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=3.2e-12 Score=140.67 Aligned_cols=197 Identities=12% Similarity=0.069 Sum_probs=132.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+..++|||||++|||+...++ ..+|+++|+++|+.... ..++....++||||| .|+|+...+. ..+||.+++.+
T Consensus 206 v~~p~wSPDG~~la~~s~~~~--~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g--~~~Iy~~d~~~ 281 (429)
T PRK01742 206 LMSPAWSPDGSKLAYVSFENK--KSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDG--VLNIYVMGANG 281 (429)
T ss_pred cccceEcCCCCEEEEEEecCC--CcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCC--cEEEEEEECCC
Confidence 567899999999999987544 57899999999876544 344444568999999 7888764322 24699999876
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEEEcCC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD 350 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~ 350 (736)
+. ...+.. . ......+.|||||++|++.++..+..+||.++..++. .+.+... +....|+|||++|++...
T Consensus 282 ~~--~~~lt~-~-~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~-~~~l~~~--~~~~~~SpDG~~ia~~~~-- 352 (429)
T PRK01742 282 GT--PSQLTS-G-AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGG-ASLVGGR--GYSAQISADGKTLVMING-- 352 (429)
T ss_pred CC--eEeecc-C-CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCC-eEEecCC--CCCccCCCCCCEEEEEcC--
Confidence 52 233332 2 2233468899999999998877777899999998765 5554322 223458999999988754
Q ss_pred CCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 351 ELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 351 ~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
..++.+|+.+. ....+.... ...-..+++++..+++...+++...+++++.+
T Consensus 353 ----~~i~~~Dl~~g-~~~~lt~~~-~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~ 404 (429)
T PRK01742 353 ----DNVVKQDLTSG-STEVLSSTF-LDESPSISPNGIMIIYSSTQGLGKVLQLVSAD 404 (429)
T ss_pred ----CCEEEEECCCC-CeEEecCCC-CCCCceECCCCCEEEEEEcCCCceEEEEEECC
Confidence 24777888763 223333222 11122455666677777666665556666655
No 62
>PLN02511 hydrolase
Probab=99.54 E-value=1.7e-13 Score=148.19 Aligned_cols=140 Identities=16% Similarity=0.149 Sum_probs=96.1
Q ss_pred eEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhh
Q 004690 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 564 (736)
Q Consensus 485 ~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 564 (736)
..++..+.+.||..+....+.+... ......|+||++||..+.+....+......+.++||.|+++|+||+|+....
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~-- 146 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT-- 146 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC--
Confidence 3455677788998777654432211 1223468999999976665432233445567789999999999999875421
Q ss_pred hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc--eeEEEEcCCccc
Q 004690 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVD 631 (736)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~--~~a~v~~~p~~d 631 (736)
. .........+|+.+++++|..+. ...++.++|+|+||.+++.++.++|+. +.++++.++..+
T Consensus 147 ~--~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 147 T--PQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred C--cCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 0 01111344689999999998763 235899999999999999999999876 666666555444
No 63
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.53 E-value=2.3e-13 Score=144.21 Aligned_cols=220 Identities=14% Similarity=0.081 Sum_probs=129.9
Q ss_pred EeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCC--------------------C---C-chhHHHHHHCCc
Q 004690 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--------------------A---F-NSSRLSLLDRGF 546 (736)
Q Consensus 491 ~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~--------------------~---~-~~~~~~l~~~G~ 546 (736)
+.+.||..|......|+ .+..+|+++||..+..... . | ...+..|+++||
T Consensus 2 ~~~~~g~~l~~~~~~~~------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGY 75 (332)
T ss_pred ccCCCCCeEEEeeeecc------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCC
Confidence 56779998887755553 2457999999955544311 1 1 245678999999
Q ss_pred EEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHc------------------CCCCCCcEEEEEeChHHHH
Q 004690 547 IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN------------------CYCTKEKLCIEGRSAGGLL 608 (736)
Q Consensus 547 ~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~ri~~~G~S~GG~l 608 (736)
.|+++|.||+|.+...-...+....-..-++|+...++.+.+. .+-...++.++||||||.+
T Consensus 76 ~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9999999999975432111111111122335555566655431 1111247999999999999
Q ss_pred HHHHHHhCCC--------ceeEEEEcCCccchhh------------------hc--cCCCCC------Ccc-----cccc
Q 004690 609 IGAVLNMRPD--------LFKAAVAAVPFVDVLT------------------TM--LDPTIP------LTT-----AEWE 649 (736)
Q Consensus 609 a~~~~~~~p~--------~~~a~v~~~p~~d~~~------------------~~--~~~~~p------~~~-----~~~~ 649 (736)
++.++.+.++ .++++|+.+|.+.+.. .+ ..+... ... ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIK 235 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHh
Confidence 9988865432 5788888887643210 00 001000 000 0000
Q ss_pred ------------------------c----ccc-ccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 004690 650 ------------------------V----KAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 700 (736)
Q Consensus 650 ------------------------i----~~~-~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g 700 (736)
+ ... ...|+|++||.+|..|++..+.++++++... ..+++++ ++++
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~---~g~~ 310 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTL---EDMD 310 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEE---CCCC
Confidence 1 111 1357999999999999999998888766433 2344455 4899
Q ss_pred cCCCCChHHHHHHHHHHHHHHH
Q 004690 701 HFSKSGRFERLREAAFTYTFLM 722 (736)
Q Consensus 701 H~~~~~~~~~~~~~a~~~~fl~ 722 (736)
|....... .-+-..++.+||.
T Consensus 311 H~i~~E~~-~~~v~~~i~~wL~ 331 (332)
T TIGR01607 311 HVITIEPG-NEEVLKKIIEWIS 331 (332)
T ss_pred CCCccCCC-HHHHHHHHHHHhh
Confidence 98754321 1112334677874
No 64
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.52 E-value=2.8e-13 Score=123.76 Aligned_cols=198 Identities=16% Similarity=0.160 Sum_probs=128.7
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCC--CCcCC-CCCCchhHHHHHHCCcEEEEEcccCCCCCChhh
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGS--YEICN-DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 563 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg--~~~~~-~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 563 (736)
.++.++..-|. +.+. +-|.+. ...|+.|.+|-- ++..+ ...-...+..|.++||.++.+|+||-|.+...|
T Consensus 5 ~~v~i~Gp~G~-le~~-~~~~~~----~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f 78 (210)
T COG2945 5 PTVIINGPAGR-LEGR-YEPAKT----PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF 78 (210)
T ss_pred CcEEecCCccc-ceec-cCCCCC----CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc
Confidence 44556655553 4333 223222 456777777642 23322 222223456788999999999999988776554
Q ss_pred hhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCC
Q 004690 564 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 643 (736)
Q Consensus 564 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~ 643 (736)
.++....+|..+|++|+.++.. +..-..+.|+|.|+++++.++.++|+. ...+...|..+...+..
T Consensus 79 ------D~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~~dfs~------ 144 (210)
T COG2945 79 ------DNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINAYDFSF------ 144 (210)
T ss_pred ------cCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCchhhhh------
Confidence 4556677999999999998854 223357899999999999999998864 55666666666322211
Q ss_pred ccccccccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHH
Q 004690 644 TTAEWEVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 722 (736)
Q Consensus 644 ~~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~ 722 (736)
+.+ ..-|.|+++|+.|++|.+....++++- .+.+.+.+. +++|++...-....+. +.+||.
T Consensus 145 ------l~P-~P~~~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~---~a~HFF~gKl~~l~~~---i~~~l~ 205 (210)
T COG2945 145 ------LAP-CPSPGLVIQGDADDVVDLVAVLKWQES-----IKITVITIP---GADHFFHGKLIELRDT---IADFLE 205 (210)
T ss_pred ------ccC-CCCCceeEecChhhhhcHHHHHHhhcC-----CCCceEEec---CCCceecccHHHHHHH---HHHHhh
Confidence 111 223599999999999998877777643 334444554 9999986543333322 567773
No 65
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.51 E-value=1.3e-12 Score=137.43 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=88.1
Q ss_pred eEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhh
Q 004690 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 564 (736)
Q Consensus 485 ~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 564 (736)
..+.+.+...+|.++...+. ..+. ...|.||++||.++.. ..|......|.++||.|+++|.||+|.+.....
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~-~~G~----~~~~~lvliHG~~~~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~ 92 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYV-DEGP----ADGPPVLLLHGEPSWS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTR 92 (302)
T ss_pred CceeEeecCCCCceEEEEEE-ecCC----CCCCEEEEECCCCCch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCC
Confidence 44667777667766554422 2221 1247899999954332 336677777888899999999999987643211
Q ss_pred hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
....++++..+.+..++++- +.+++.++|||+||.++..++.++|++++++|+.++
T Consensus 93 ------~~~~~~~~~a~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 93 ------REDYTYARHVEWMRSWFEQL--DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred ------cccCCHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 11234455555555444432 236899999999999999999999999999988875
No 66
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=2.4e-13 Score=133.04 Aligned_cols=129 Identities=20% Similarity=0.269 Sum_probs=98.0
Q ss_pred CCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhcccc---
Q 004690 494 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKF--- 569 (736)
Q Consensus 494 ~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~--- 569 (736)
.+|.+.+++++.|.+. + ...|+||++||+.++.....-..-+..|+++ ||.|+.|| ++.++|...+..
T Consensus 42 ~~g~~r~y~l~vP~g~-~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~ 113 (312)
T COG3509 42 VNGLKRSYRLYVPPGL-P--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWF 113 (312)
T ss_pred cCCCccceEEEcCCCC-C--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccC
Confidence 3567788999999886 2 3449999999987654322122234567775 99999994 344555333322
Q ss_pred -----ccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCcc
Q 004690 570 -----LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (736)
Q Consensus 570 -----~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~ 630 (736)
..+..++..+.+.++.|+.+.-+||.||.+.|.|+||.|+..++..+|++|+|+...++..
T Consensus 114 ~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 114 GPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 2334567788899999999999999999999999999999999999999999988887765
No 67
>PLN00021 chlorophyllase
Probab=99.51 E-value=2.2e-12 Score=134.14 Aligned_cols=207 Identities=17% Similarity=0.149 Sum_probs=132.0
Q ss_pred eEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChH
Q 004690 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 576 (736)
Q Consensus 497 ~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 576 (736)
..+++.++.|... ++.|+||++||+.+. ...|...+..|+++||+|+++|++|.+..+ ....+
T Consensus 37 ~~~p~~v~~P~~~----g~~PvVv~lHG~~~~--~~~y~~l~~~Las~G~~VvapD~~g~~~~~-----------~~~~i 99 (313)
T PLN00021 37 PPKPLLVATPSEA----GTYPVLLFLHGYLLY--NSFYSQLLQHIASHGFIVVAPQLYTLAGPD-----------GTDEI 99 (313)
T ss_pred CCceEEEEeCCCC----CCCCEEEEECCCCCC--cccHHHHHHHHHhCCCEEEEecCCCcCCCC-----------chhhH
Confidence 4688888888653 678999999996543 234667778899999999999998743211 12345
Q ss_pred HHHHHHHHHHHHc--------CCCCCCcEEEEEeChHHHHHHHHHHhCCC-----ceeEEEEcCCccchhhhccCCCCCC
Q 004690 577 TDFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPL 643 (736)
Q Consensus 577 ~D~~~~~~~l~~~--------~~~d~~ri~~~G~S~GG~la~~~~~~~p~-----~~~a~v~~~p~~d~~~~~~~~~~p~ 643 (736)
+|..++++|+.+. ...|+++++++|||+||.++..++..+++ .++++|+..|+..+.... ...|.
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~--~~~p~ 177 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK--QTPPP 177 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc--CCCCc
Confidence 6777778887752 23577899999999999999999988774 578999988876542111 11111
Q ss_pred ccccccc-cccccccEEEeecCCCC-----C----CCChH-HHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCCh-----
Q 004690 644 TTAEWEV-KAQNYPHILVTAGLNDP-----R----VMYSE-PAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR----- 707 (736)
Q Consensus 644 ~~~~~~i-~~~~~ppvLi~~G~~D~-----~----Vp~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~----- 707 (736)
. ..+.. .-....|+||+++..|. . .|... -.+|+++++. +...++.+ ++||....+.
T Consensus 178 i-l~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~---~~~~~~~~---~~gH~~~~~~~~~~~ 250 (313)
T PLN00021 178 V-LTYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA---PAVHFVAK---DYGHMDMLDDDTSGI 250 (313)
T ss_pred c-cccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC---Ceeeeeec---CCCcceeecCCCccc
Confidence 0 01100 01134569999888763 2 23333 3677766543 33333443 8888653111
Q ss_pred --------------HHHHH--HHHHHHHHHHHhcCCCC
Q 004690 708 --------------FERLR--EAAFTYTFLMRALSMLP 729 (736)
Q Consensus 708 --------------~~~~~--~~a~~~~fl~~~l~~~~ 729 (736)
.+..+ -...+.+||..+|....
T Consensus 251 ~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~~ 288 (313)
T PLN00021 251 RGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGDT 288 (313)
T ss_pred cccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCch
Confidence 11111 13457899999986543
No 68
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.50 E-value=6.5e-13 Score=138.10 Aligned_cols=188 Identities=15% Similarity=0.140 Sum_probs=115.5
Q ss_pred CcEEEEecCCCCcCCCC-CCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 516 DPLLLYGYGSYEICNDP-AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
.|.||++||.......+ .+......|++.||.|+++|+||+|.+...... . .......+|+.+.++.+ +.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~-~~~~~~~~~l~~~l~~l------~~ 100 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD--E-QRGLVNARAVKGLMDAL------DI 100 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc--c-cccchhHHHHHHHHHHc------CC
Confidence 46799999954333221 111234567788999999999999876532111 0 00011234444444443 34
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccch---------------hhhc----------------cCCC-CC
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV---------------LTTM----------------LDPT-IP 642 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~---------------~~~~----------------~~~~-~p 642 (736)
+++.++||||||.++..++.++|++++++|+.+|.... ...+ .++. ..
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLIT 180 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCc
Confidence 78999999999999999999999999999987763110 0000 0000 00
Q ss_pred Cc------------cc---cc------------c----ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeE
Q 004690 643 LT------------TA---EW------------E----VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 691 (736)
Q Consensus 643 ~~------------~~---~~------------~----i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~ 691 (736)
.. .. .+ . +.. ...|+|+++|++|..||+..+.++++.+. ..+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvlli~G~~D~~v~~~~~~~~~~~~~----~~~~~ 255 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGE-IKAKTLVTWGRDDRFVPLDHGLKLLWNMP----DAQLH 255 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhh-CCCCEEEEEccCCCcCCchhHHHHHHhCC----CCEEE
Confidence 00 00 00 0 111 23469999999999999998888877664 34555
Q ss_pred EEEecCCCCcCCCCChHHHHHHHHHHHHHHH
Q 004690 692 LFKCELGAGHFSKSGRFERLREAAFTYTFLM 722 (736)
Q Consensus 692 ~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~ 722 (736)
+++ ++||.......+.+.+. +.+||.
T Consensus 256 ~i~---~agH~~~~e~p~~~~~~--i~~fl~ 281 (282)
T TIGR03343 256 VFS---RCGHWAQWEHADAFNRL--VIDFLR 281 (282)
T ss_pred EeC---CCCcCCcccCHHHHHHH--HHHHhh
Confidence 664 89998866555544432 567764
No 69
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.50 E-value=3.2e-13 Score=130.73 Aligned_cols=205 Identities=18% Similarity=0.174 Sum_probs=133.7
Q ss_pred CCCeEEeEEEEEecCCccCCCCC-cEEEEecCCCCcCCCCCC---ch-hHHHHH--HCCcEEEEEcccCCCCCChhhhhc
Q 004690 494 SDGTQIPICIVYRKNLVKLDGSD-PLLLYGYGSYEICNDPAF---NS-SRLSLL--DRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 494 ~dG~~i~~~~~~p~~~~~~~~~~-P~vl~~hGg~~~~~~~~~---~~-~~~~l~--~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
.-|.++++.++.|++. .+++++ |++|++||+........- +. -+..++ +-++-|++|.|- .-+.+.
T Consensus 169 ~tgneLkYrly~Pkdy-~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~------~if~d~ 241 (387)
T COG4099 169 STGNELKYRLYTPKDY-APDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYN------PIFADS 241 (387)
T ss_pred ccCceeeEEEeccccc-CCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccc------cccccc
Confidence 4577899999999998 777887 999999997554332110 00 011111 124455555531 111111
Q ss_pred cccccCcChHHHHHHHHH-HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCcc
Q 004690 567 GKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 645 (736)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~ 645 (736)
.. +-.+.....++.++ -|.++..+|.+||.++|.|+||+.+.+++.++|+.|+|+++.+|--|-...
T Consensus 242 e~--~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~l---------- 309 (387)
T COG4099 242 EE--KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYL---------- 309 (387)
T ss_pred cc--ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhh----------
Confidence 11 11222344555555 677788899999999999999999999999999999999999986552110
Q ss_pred ccccccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEe----cCCCCcCCCCChHHHHHHHHHHHHHH
Q 004690 646 AEWEVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC----ELGAGHFSKSGRFERLREAAFTYTFL 721 (736)
Q Consensus 646 ~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~gH~~~~~~~~~~~~~a~~~~fl 721 (736)
++.....|+.++|+.+|.++|.+.|+-.+++|++.+.+++...+.+ ..|-.|.+. ....-..++...||
T Consensus 310 ----v~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~---w~atyn~~eaieWL 382 (387)
T COG4099 310 ----VRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVDHSGV---WWATYNDAEAIEWL 382 (387)
T ss_pred ----hhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhccccccccCCCCc---ceeecCCHHHHHHH
Confidence 3334456799999999999999999999999999887665544431 112333221 11111234567888
Q ss_pred HHh
Q 004690 722 MRA 724 (736)
Q Consensus 722 ~~~ 724 (736)
.++
T Consensus 383 l~Q 385 (387)
T COG4099 383 LKQ 385 (387)
T ss_pred Hhc
Confidence 765
No 70
>COG0400 Predicted esterase [General function prediction only]
Probab=99.47 E-value=7.3e-13 Score=127.69 Aligned_cols=186 Identities=17% Similarity=0.167 Sum_probs=122.1
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCC---hhhhhccccccC--cChHHHHHHHHHHHHH
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG---RQWYENGKFLKK--KNTFTDFIACAEYLIK 588 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g---~~~~~~~~~~~~--~~~~~D~~~~~~~l~~ 588 (736)
...|+||++||..+ ....|.+....++- .+.++.+.-+=.-+.+ ..|...+....+ ....+.+.+.++.+.+
T Consensus 16 p~~~~iilLHG~Gg--de~~~~~~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 16 PAAPLLILLHGLGG--DELDLVPLPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCcEEEEEecCCC--ChhhhhhhhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 45789999999442 23334443333222 3555544322111112 223332222211 1233445566666676
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCccccccccccccccEEEeecCCCCC
Q 004690 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAGLNDPR 668 (736)
Q Consensus 589 ~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G~~D~~ 668 (736)
+..++++|+++.|+|+|+.+++.++.++|++++++|+..|++-.... . ......+|+|++||..|++
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~-~------------~~~~~~~pill~hG~~Dpv 159 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE-L------------LPDLAGTPILLSHGTEDPV 159 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc-c------------ccccCCCeEEEeccCcCCc
Confidence 77788999999999999999999999999999999999996553211 0 1112456799999999999
Q ss_pred CCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhc
Q 004690 669 VMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 725 (736)
Q Consensus 669 Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l 725 (736)
||..++.++.+.|++.|.+++...+ ..||..... +...+..|+...+
T Consensus 160 vp~~~~~~l~~~l~~~g~~v~~~~~----~~GH~i~~e------~~~~~~~wl~~~~ 206 (207)
T COG0400 160 VPLALAEALAEYLTASGADVEVRWH----EGGHEIPPE------ELEAARSWLANTL 206 (207)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEe----cCCCcCCHH------HHHHHHHHHHhcc
Confidence 9999999999999999988765555 389976432 2233566887654
No 71
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.45 E-value=2e-12 Score=135.40 Aligned_cols=108 Identities=12% Similarity=0.037 Sum_probs=76.9
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
.|.||++||..+++. .|......|+++ |.|+++|.||+|.+...-.. ........+++|+...+..+++.-. .+
T Consensus 29 ~~~vlllHG~~~~~~--~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~-~~~~~~~~~~~~~a~~l~~~l~~l~--~~ 102 (294)
T PLN02824 29 GPALVLVHGFGGNAD--HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPR-SAPPNSFYTFETWGEQLNDFCSDVV--GD 102 (294)
T ss_pred CCeEEEECCCCCChh--HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccc-cccccccCCHHHHHHHHHHHHHHhc--CC
Confidence 378999999655543 477777788776 69999999999976532100 0001123456666665555554322 26
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
++.++||||||.+++.++.++|++++++|+.+|.
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~ 136 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINIS 136 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCC
Confidence 8999999999999999999999999999988764
No 72
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.44 E-value=1.3e-12 Score=133.34 Aligned_cols=186 Identities=16% Similarity=0.173 Sum_probs=115.6
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
+.|+||++||..+... .|...... +.+||.|+++|+||+|.+..... ....++|....+..+++. .+.
T Consensus 12 ~~~~iv~lhG~~~~~~--~~~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~i~~--~~~ 79 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS--YWAPQLDV-LTQRFHVVTYDHRGTGRSPGELP-------PGYSIAHMADDVLQLLDA--LNI 79 (257)
T ss_pred CCCEEEEEcCCCcchh--HHHHHHHH-HHhccEEEEEcCCCCCCCCCCCc-------ccCCHHHHHHHHHHHHHH--hCC
Confidence 4688999999655432 34444434 45689999999999987654211 112345544444444433 234
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh-----------hccCC---------------------CCC
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-----------TMLDP---------------------TIP 642 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~-----------~~~~~---------------------~~p 642 (736)
.++.++|+|+||+++..++.++|+.++++|+..++..... .+... ..+
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 7899999999999999999999999999988776433210 00000 000
Q ss_pred C-------ccccc----------------c----ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEe
Q 004690 643 L-------TTAEW----------------E----VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 695 (736)
Q Consensus 643 ~-------~~~~~----------------~----i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~ 695 (736)
. ....+ . +.. ...|+|+++|++|..+|++.+.++++.+.. .+.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~- 233 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDR-IQHPVLLIANRDDMLVPYTQSLRLAAALPN----AQLKLLP- 233 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcc-cCccEEEEecCcCcccCHHHHHHHHHhcCC----ceEEEEC-
Confidence 0 00000 0 111 356799999999999999998888776532 3444554
Q ss_pred cCCCCcCCCCChHHHHHHHHHHHHHHH
Q 004690 696 ELGAGHFSKSGRFERLREAAFTYTFLM 722 (736)
Q Consensus 696 ~~~~gH~~~~~~~~~~~~~a~~~~fl~ 722 (736)
++||.......+.+.+ .+.+||.
T Consensus 234 --~~gH~~~~~~~~~~~~--~i~~fl~ 256 (257)
T TIGR03611 234 --YGGHASNVTDPETFNR--ALLDFLK 256 (257)
T ss_pred --CCCCCccccCHHHHHH--HHHHHhc
Confidence 8999876544443333 2566663
No 73
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.43 E-value=9.7e-11 Score=129.13 Aligned_cols=244 Identities=14% Similarity=0.103 Sum_probs=156.4
Q ss_pred CCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC-ccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcE
Q 004690 199 SPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDI 276 (736)
Q Consensus 199 SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~-~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~ 276 (736)
...+.+++|....++.....|+++|.+++....+...+ ....+.||||| .|+|+.... ...+|+++++.++. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~--~~~~i~v~d~~~g~--~~ 227 (417)
T TIGR02800 152 GAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFES--GKPEIYVQDLATGQ--RE 227 (417)
T ss_pred CCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCC--CCcEEEEEECCCCC--EE
Confidence 45678899998765455789999999877665543322 34568999999 899987643 23579999998762 22
Q ss_pred EEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccc-ceeEEEeeeCCEEEEEEcCCCCCCc
Q 004690 277 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNS 355 (736)
Q Consensus 277 ~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~ 355 (736)
.+.. .. .....+.|||||+.|++.....+..+||++++.++. .+.++.... .....|++||++|+|.+++.+ ..
T Consensus 228 ~~~~-~~-~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g--~~ 302 (417)
T TIGR02800 228 KVAS-FP-GMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ-LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGG--SP 302 (417)
T ss_pred Eeec-CC-CCccceEECCCCCEEEEEECCCCCccEEEEECCCCC-EEECCCCCCCCCCEEECCCCCEEEEEECCCC--Cc
Confidence 2322 21 222357899999999988776667899999999876 666654322 224568999999999998764 45
Q ss_pred EEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCC
Q 004690 356 ELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPS 435 (736)
Q Consensus 356 ~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~ 435 (736)
+||.+++++. ....+...........++++++.+++.....+..+|+++++.. +.. +.+ +... .....
T Consensus 303 ~iy~~d~~~~-~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~--~~~------~~l--~~~~-~~~~p 370 (417)
T TIGR02800 303 QIYMMDADGG-EVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG--GGE------RVL--TDTG-LDESP 370 (417)
T ss_pred eEEEEECCCC-CEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCC--CCe------EEc--cCCC-CCCCc
Confidence 8999998763 3333443332222224455566777777666667788888763 222 111 1111 11222
Q ss_pred CcccCcceEEEEeccCCCCcEEEEEECCC
Q 004690 436 ESVFSSRILRFHYSSLRTPPSVYDYDMDM 464 (736)
Q Consensus 436 ~~~~~~~~~~~~~ss~~~P~~~~~~d~~~ 464 (736)
..++++..+++....... ..+|.++...
T Consensus 371 ~~spdg~~l~~~~~~~~~-~~l~~~~~~g 398 (417)
T TIGR02800 371 SFAPNGRMILYATTRGGR-GVLGLVSTDG 398 (417)
T ss_pred eECCCCCEEEEEEeCCCc-EEEEEEECCC
Confidence 345677777776654433 4566666543
No 74
>PRK11071 esterase YqiA; Provisional
Probab=99.42 E-value=3.4e-12 Score=123.60 Aligned_cols=165 Identities=17% Similarity=0.098 Sum_probs=103.8
Q ss_pred cEEEEecCCCCcCCCCCCch--hHHHHHHC--CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCC
Q 004690 517 PLLLYGYGSYEICNDPAFNS--SRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~--~~~~l~~~--G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (736)
|.||++||..++... |.. ....+.+. +|.|+++|.||.+ ++..+.++.++++..
T Consensus 2 p~illlHGf~ss~~~--~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~~- 59 (190)
T PRK11071 2 STLLYLHGFNSSPRS--AKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEHG- 59 (190)
T ss_pred CeEEEECCCCCCcch--HHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHcC-
Confidence 679999995443332 332 22344443 8999999999753 245555566665432
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhc----cCCCCCCcccccc-------------cccc-c
Q 004690 593 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM----LDPTIPLTTAEWE-------------VKAQ-N 654 (736)
Q Consensus 593 d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~----~~~~~p~~~~~~~-------------i~~~-~ 654 (736)
.+++.++|+|+||++++.++.++|. + +|+.+|..+....+ .....+.....|. +... .
T Consensus 60 -~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~ 135 (190)
T PRK11071 60 -GDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLES 135 (190)
T ss_pred -CCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCC
Confidence 3689999999999999999999883 3 46677766643221 1111111111121 2222 2
Q ss_pred cccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHH
Q 004690 655 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 721 (736)
Q Consensus 655 ~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl 721 (736)
..|++|+||.+|+.||+.++.+++++. +.+++ +|++|.+... .+.+ ..+.+||
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~-------~~~~~---~ggdH~f~~~-~~~~---~~i~~fl 188 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC-------RQTVE---EGGNHAFVGF-ERYF---NQIVDFL 188 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc-------ceEEE---CCCCcchhhH-HHhH---HHHHHHh
Confidence 335889999999999999999999843 23344 4999988432 2222 3356675
No 75
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.42 E-value=4.8e-12 Score=131.07 Aligned_cols=102 Identities=18% Similarity=0.107 Sum_probs=73.9
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
.|+||++||..+... .|......|+ ++|.|+++|+||.|.+..... ...+++++.+.+..+++.- +.+
T Consensus 28 ~~~vv~~hG~~~~~~--~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~l~~~i~~~--~~~ 95 (278)
T TIGR03056 28 GPLLLLLHGTGASTH--SWRDLMPPLA-RSFRVVAPDLPGHGFTRAPFR-------FRFTLPSMAEDLSALCAAE--GLS 95 (278)
T ss_pred CCeEEEEcCCCCCHH--HHHHHHHHHh-hCcEEEeecCCCCCCCCCccc-------cCCCHHHHHHHHHHHHHHc--CCC
Confidence 478999999655432 3555555554 479999999999987543211 1245667666666666542 235
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
++.++|||+||.+++.++.++|++++++|+.++.
T Consensus 96 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~ 129 (278)
T TIGR03056 96 PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAA 129 (278)
T ss_pred CceEEEECccHHHHHHHHHhCCcccceEEEEcCc
Confidence 7899999999999999999999988888877654
No 76
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.42 E-value=8.6e-11 Score=129.40 Aligned_cols=190 Identities=14% Similarity=0.137 Sum_probs=129.6
Q ss_pred CCEEEEEEeCCC-CcEEEEEEEECCCCCeecccc-cCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEE
Q 004690 202 NKLVAYAEDTKG-DEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICL 278 (736)
Q Consensus 202 G~~la~~~~~~G-~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~ 278 (736)
+++|||.....+ ...++|+++|.+++....++. ......+.||||| .|+|++.++ ...+||++++.++. ...+
T Consensus 168 ~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~--~~~~i~i~dl~tg~--~~~l 243 (429)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFEN--KKSQLVVHDLRSGA--RKVV 243 (429)
T ss_pred CCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecC--CCcEEEEEeCCCCc--eEEE
Confidence 689999987643 446899999998877654432 3335669999999 899988643 23569999998763 2233
Q ss_pred EeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccc-eeEEEeeeCCEEEEEEcCCCCCCcEE
Q 004690 279 YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSEL 357 (736)
Q Consensus 279 ~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~t~~~~~~~~~l 357 (736)
.... .....+.|||||++|++.+...+..+||++|+++++ .+.++..... ....|+|||++|+|.+++++ ..+|
T Consensus 244 ~~~~--g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g--~~~I 318 (429)
T PRK01742 244 ASFR--GHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSG--SPQV 318 (429)
T ss_pred ecCC--CccCceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCC--CceE
Confidence 2211 122357899999999998766666789999998876 7777654322 24669999999999998764 4689
Q ss_pred EEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 358 LACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 358 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
|.++..+. ....+ .... ....++++++.+++... ..+.++++.
T Consensus 319 ~~~~~~~~-~~~~l-~~~~--~~~~~SpDG~~ia~~~~----~~i~~~Dl~ 361 (429)
T PRK01742 319 YRMSASGG-GASLV-GGRG--YSAQISADGKTLVMING----DNVVKQDLT 361 (429)
T ss_pred EEEECCCC-CeEEe-cCCC--CCccCCCCCCEEEEEcC----CCEEEEECC
Confidence 99988653 22223 3222 22345666777766543 246667775
No 77
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.41 E-value=1.2e-11 Score=127.57 Aligned_cols=131 Identities=14% Similarity=0.023 Sum_probs=92.9
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCC--CCCchhHHHHHHCCcEEEEEcccCCCCCChhhh
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND--PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 564 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 564 (736)
+.+.++. +|..+.+.+..|.+. +.+.||++|||...... ..+...+..|+++||.|+++|+||+|.+....
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~-----~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~- 75 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGAS-----HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN- 75 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCC-----CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-
Confidence 4566664 567788888887643 23567777876543321 22344567888999999999999999764321
Q ss_pred hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccc
Q 004690 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 631 (736)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d 631 (736)
..-....+|+.++++++.++.. ..++|.++|+|+||++++.++.. +..++++|+.+|++.
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 1112345899999999987521 12679999999999999888765 567999999998754
No 78
>PLN02965 Probable pheophorbidase
Probab=99.41 E-value=7.3e-12 Score=128.14 Aligned_cols=186 Identities=13% Similarity=0.074 Sum_probs=116.9
Q ss_pred EEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcE
Q 004690 518 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 597 (736)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 597 (736)
+||++||..... ..|......|.+.||.|+++|+||+|.+... .....+++++.+.+..+++.-.. .+++
T Consensus 5 ~vvllHG~~~~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~~-~~~~ 74 (255)
T PLN02965 5 HFVFVHGASHGA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTD-------SNTVSSSDQYNRPLFALLSDLPP-DHKV 74 (255)
T ss_pred EEEEECCCCCCc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCC-------ccccCCHHHHHHHHHHHHHhcCC-CCCE
Confidence 489999966443 3477777788889999999999999976431 01123355555544444443111 1589
Q ss_pred EEEEeChHHHHHHHHHHhCCCceeEEEEcCCcc---ch-----hhh-cc-----------C-CCCCC----ccccc----
Q 004690 598 CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV---DV-----LTT-ML-----------D-PTIPL----TTAEW---- 648 (736)
Q Consensus 598 ~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~---d~-----~~~-~~-----------~-~~~p~----~~~~~---- 648 (736)
.++||||||.++..++.++|++++++|+.++.. +. ... .. . ...+. ...++
T Consensus 75 ~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PLN02965 75 ILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHY 154 (255)
T ss_pred EEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHH
Confidence 999999999999999999999999988876531 10 000 00 0 00000 00000
Q ss_pred --c---------------------------cc---ccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEec
Q 004690 649 --E---------------------------VK---AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCE 696 (736)
Q Consensus 649 --~---------------------------i~---~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~ 696 (736)
. +. .....|+|+++|++|..+|+..++.+++.+... +++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a----~~~~i~-- 228 (255)
T PLN02965 155 YYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA----QTYVLE-- 228 (255)
T ss_pred HhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc----eEEEec--
Confidence 0 00 014457999999999999998888877665432 345554
Q ss_pred CCCCcCCCCChHHHHHHHHHHHHHHH
Q 004690 697 LGAGHFSKSGRFERLREAAFTYTFLM 722 (736)
Q Consensus 697 ~~~gH~~~~~~~~~~~~~a~~~~fl~ 722 (736)
++||.....+.+.+... +.+|+.
T Consensus 229 -~~GH~~~~e~p~~v~~~--l~~~~~ 251 (255)
T PLN02965 229 -DSDHSAFFSVPTTLFQY--LLQAVS 251 (255)
T ss_pred -CCCCchhhcCHHHHHHH--HHHHHH
Confidence 89998766555544442 444543
No 79
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.41 E-value=1.8e-11 Score=123.93 Aligned_cols=194 Identities=13% Similarity=0.052 Sum_probs=126.2
Q ss_pred EEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCC--CCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhc
Q 004690 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN--DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 489 ~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
+++++..|. +.+++..|.+. ++.|+||++||..+... ...|...+..|+++||.|+.+|+||+|.+......
T Consensus 3 ~~l~~~~g~-~~~~~~~p~~~----~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~- 76 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPVAV----GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA- 76 (266)
T ss_pred EEecCCCCc-EEEEEecCCCC----CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-
Confidence 567777775 44554444432 35789999999443222 12244456788899999999999999876432211
Q ss_pred cccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhc----------
Q 004690 567 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM---------- 636 (736)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~---------- 636 (736)
..-....+|+.+++++|.+.+ ..+|+++|+||||.+++.++.++|+.++++|+.+|++....++
T Consensus 77 ---~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~ 150 (266)
T TIGR03101 77 ---ARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVA 150 (266)
T ss_pred ---CCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHH
Confidence 111123588999999998764 3689999999999999999999999999999999987732211
Q ss_pred --cCCCCCC---------ccc------ccc--------cccc-------ccccEEEeecC-CCCCCCChHHHHHHHHHHh
Q 004690 637 --LDPTIPL---------TTA------EWE--------VKAQ-------NYPHILVTAGL-NDPRVMYSEPAKFVAKLRE 683 (736)
Q Consensus 637 --~~~~~p~---------~~~------~~~--------i~~~-------~~ppvLi~~G~-~D~~Vp~~~~~~~~~~l~~ 683 (736)
.....+. ... .|. +... ...++|++.-. .+..-+.....++.+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 230 (266)
T TIGR03101 151 RRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWVQ 230 (266)
T ss_pred HhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHHH
Confidence 1100000 000 011 1111 13357777553 2333445577899999999
Q ss_pred cCCCCCeEEEE
Q 004690 684 MKTDDNILLFK 694 (736)
Q Consensus 684 ~~~~~~~~~~~ 694 (736)
.|..++...++
T Consensus 231 ~g~~v~~~~~~ 241 (266)
T TIGR03101 231 SGVEVTVDLVP 241 (266)
T ss_pred cCCeEeeeecC
Confidence 99988777775
No 80
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.41 E-value=3.8e-12 Score=131.91 Aligned_cols=184 Identities=17% Similarity=0.147 Sum_probs=116.0
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCc
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 596 (736)
|.||++||..+... .|......|. .+|.|+++|+||+|.+... . ...+++++.+.++.+++.- +.++
T Consensus 26 ~plvllHG~~~~~~--~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~--~------~~~~~~~~~~~~~~~i~~l--~~~~ 92 (276)
T TIGR02240 26 TPLLIFNGIGANLE--LVFPFIEALD-PDLEVIAFDVPGVGGSSTP--R------HPYRFPGLAKLAARMLDYL--DYGQ 92 (276)
T ss_pred CcEEEEeCCCcchH--HHHHHHHHhc-cCceEEEECCCCCCCCCCC--C------CcCcHHHHHHHHHHHHHHh--CcCc
Confidence 56899999554433 3555555554 4799999999999976431 0 1223455555544444432 3367
Q ss_pred EEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchh------h---hccC------CC----------------CCCcc
Q 004690 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL------T---TMLD------PT----------------IPLTT 645 (736)
Q Consensus 597 i~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~------~---~~~~------~~----------------~p~~~ 645 (736)
+.++|+||||.+++.+|.++|++++++|+.++..... . .+.. .. .+...
T Consensus 93 ~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (276)
T TIGR02240 93 VNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELA 172 (276)
T ss_pred eEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhh
Confidence 9999999999999999999999999999887654210 0 0000 00 00000
Q ss_pred cc------------cc--------------ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCC
Q 004690 646 AE------------WE--------------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 699 (736)
Q Consensus 646 ~~------------~~--------------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 699 (736)
.. +. +.. ...|+|+++|++|+.+|+.++.++.+.+.. .+++++. +
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G~~D~~v~~~~~~~l~~~~~~----~~~~~i~----~ 243 (276)
T TIGR02240 173 MAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHK-IQQPTLVLAGDDDPIIPLINMRLLAWRIPN----AELHIID----D 243 (276)
T ss_pred hhhhhhcccCCCchHHHHHHHHcCCchhhHhhc-CCCCEEEEEeCCCCcCCHHHHHHHHHhCCC----CEEEEEc----C
Confidence 00 00 111 334699999999999999998888776542 3455552 4
Q ss_pred CcCCCCChHHHHHHHHHHHHHHHHh
Q 004690 700 GHFSKSGRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 700 gH~~~~~~~~~~~~~a~~~~fl~~~ 724 (736)
||.......+.+.+ .+.+|+.+.
T Consensus 244 gH~~~~e~p~~~~~--~i~~fl~~~ 266 (276)
T TIGR02240 244 GHLFLITRAEAVAP--IIMKFLAEE 266 (276)
T ss_pred CCchhhccHHHHHH--HHHHHHHHh
Confidence 99876555444433 366787764
No 81
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.40 E-value=8.3e-12 Score=124.62 Aligned_cols=129 Identities=19% Similarity=0.177 Sum_probs=86.1
Q ss_pred EEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhcccc
Q 004690 490 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 569 (736)
Q Consensus 490 ~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~ 569 (736)
.+...||..+......++. +...|.||.+||--|++..+........+.++||.|+++|.||+++....-. .
T Consensus 53 ~v~~pdg~~~~ldw~~~p~----~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p----~ 124 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPR----AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP----R 124 (345)
T ss_pred EEEcCCCCEEEEeeccCcc----ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc----c
Confidence 4445566555544444322 2456999999998887777755556678889999999999999886433110 1
Q ss_pred ccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEcCC
Q 004690 570 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR---PDLFKAAVAAVP 628 (736)
Q Consensus 570 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~---p~~~~a~v~~~p 628 (736)
.......+|+..+++++.+++. +.++.++|+|+||.+.+....+. +.+-+|++..+|
T Consensus 125 ~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P 184 (345)
T COG0429 125 LYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAP 184 (345)
T ss_pred eecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCH
Confidence 1112223899999999999764 57899999999995544444332 223455555555
No 82
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.40 E-value=4.7e-12 Score=128.24 Aligned_cols=176 Identities=19% Similarity=0.191 Sum_probs=111.0
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
..|+||++||..... ..|......| ..||.|+++|+||+|.+... ....+++++.+.+..+++.- +.
T Consensus 12 ~~~~li~~hg~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~~--~~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTDL--RMWDPVLPAL-TPDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDHL--GI 78 (251)
T ss_pred CCCeEEEEcCcccch--hhHHHHHHHh-hcccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHh--CC
Confidence 468999999943332 2355555454 57999999999999876321 11234566666666655542 34
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh----------------------hc---cCCCC----CCcc
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT----------------------TM---LDPTI----PLTT 645 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~----------------------~~---~~~~~----p~~~ 645 (736)
+++.++|||+||.+++.++.++|+.++++|+.++...+.. .+ ..... +...
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 6899999999999999999999999988887765322100 00 00000 0000
Q ss_pred cccc--------------------------ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCC
Q 004690 646 AEWE--------------------------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 699 (736)
Q Consensus 646 ~~~~--------------------------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 699 (736)
..+. +.+ ...|+|+++|++|..+|++...++.+.+. ..+.+.++ ++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~ 230 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGA-IAVPTLCIAGDQDGSTPPELVREIADLVP----GARFAEIR---GA 230 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhh-cCCCeEEEEeccCCcCChHHHHHHHHhCC----CceEEEEC---CC
Confidence 0000 111 34579999999999999988877766653 23455554 89
Q ss_pred CcCCCCChHHHH
Q 004690 700 GHFSKSGRFERL 711 (736)
Q Consensus 700 gH~~~~~~~~~~ 711 (736)
||.......+.+
T Consensus 231 gH~~~~~~p~~~ 242 (251)
T TIGR02427 231 GHIPCVEQPEAF 242 (251)
T ss_pred CCcccccChHHH
Confidence 997754444433
No 83
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.40 E-value=2.1e-11 Score=127.76 Aligned_cols=100 Identities=13% Similarity=0.089 Sum_probs=73.4
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
.|.||++||.+++.. .|...+..|++++ .|+++|.||.|.+...-. ..++++..+.+..+++.- ..+
T Consensus 27 g~~vvllHG~~~~~~--~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~--------~~~~~~~a~dl~~ll~~l--~~~ 93 (295)
T PRK03592 27 GDPIVFLHGNPTSSY--LWRNIIPHLAGLG-RCLAPDLIGMGASDKPDI--------DYTFADHARYLDAWFDAL--GLD 93 (295)
T ss_pred CCEEEEECCCCCCHH--HHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCC--------CCCHHHHHHHHHHHHHHh--CCC
Confidence 467999999765543 3666677888876 999999999998654211 123445444444444332 236
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
++.++|||+||.+++.++.++|++++++|+.++
T Consensus 94 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 94 DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEA 126 (295)
T ss_pred CeEEEEECHHHHHHHHHHHhChhheeEEEEECC
Confidence 899999999999999999999999999998876
No 84
>PLN02872 triacylglycerol lipase
Probab=99.39 E-value=3.9e-12 Score=136.43 Aligned_cols=145 Identities=21% Similarity=0.260 Sum_probs=94.8
Q ss_pred CCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCC----chhHHHHHHCCcEEEEEcccCC
Q 004690 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF----NSSRLSLLDRGFIFAIAQIRGG 556 (736)
Q Consensus 481 ~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~----~~~~~~l~~~G~~v~~~d~RG~ 556 (736)
..+|.+|+..+++.||..+.+.-+.+........+.|.||++||....+..+.. ...+..|+++||.|.++|.||.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 347888999999999988877655332210112345789999997655443221 2234468899999999999997
Q ss_pred CC-CChhhhhcc-c----cccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC---ceeEEEEcC
Q 004690 557 GE-LGRQWYENG-K----FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAV 627 (736)
Q Consensus 557 g~-~g~~~~~~~-~----~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~---~~~a~v~~~ 627 (736)
+. .|....... . .........|+.++++++.+.. .+++.++|||+||.+++.++ .+|+ .++++++.+
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhc
Confidence 63 222111110 0 1111233479999999998652 36899999999999988555 5676 455656555
Q ss_pred Cc
Q 004690 628 PF 629 (736)
Q Consensus 628 p~ 629 (736)
|.
T Consensus 195 P~ 196 (395)
T PLN02872 195 PI 196 (395)
T ss_pred ch
Confidence 54
No 85
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.38 E-value=1.1e-11 Score=133.45 Aligned_cols=206 Identities=13% Similarity=0.106 Sum_probs=144.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
.+-.+.|||||+.++|..-..+. ...++++|+++|+.... ...+....++||||| +|+|+...+ ...+||..++.
T Consensus 194 ~~~~p~ws~~~~~~~y~~f~~~~-~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rd--g~~~iy~~dl~ 270 (425)
T COG0823 194 LILTPAWSPDGKKLAYVSFELGG-CPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRD--GSPDIYLMDLD 270 (425)
T ss_pred ceeccccCcCCCceEEEEEecCC-CceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCC--CCccEEEEcCC
Confidence 45568999999999999776553 27899999999886554 555666679999999 899988754 45679999998
Q ss_pred CCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eEEEeeeCCEEEEEEc
Q 004690 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRR 348 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~t~ 348 (736)
+... .. +.+.. .....+.|||||++|+|.+...+...||+++++++. .+.++....+. ...|+|||++|+|.+.
T Consensus 271 ~~~~--~~-Lt~~~-gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~-~~riT~~~~~~~~p~~SpdG~~i~~~~~ 345 (425)
T COG0823 271 GKNL--PR-LTNGF-GINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ-VTRLTFSGGGNSNPVWSPDGDKIVFESS 345 (425)
T ss_pred CCcc--ee-cccCC-ccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc-eeEeeccCCCCcCccCCCCCCEEEEEec
Confidence 8742 22 22222 233378899999999999999999999999999887 77777655443 3459999999999985
Q ss_pred CCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 349 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
.+| ...++..++..... ..+...........+...+..+++.....+.+.+.....+
T Consensus 346 ~~g--~~~i~~~~~~~~~~-~~~lt~~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~ 402 (425)
T COG0823 346 SGG--QWDIDKNDLASGGK-IRILTSTYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLD 402 (425)
T ss_pred cCC--ceeeEEeccCCCCc-EEEccccccCCCCCcCCCCceEEEeccCCCCceEEEeecc
Confidence 432 36677777765332 2233333222233444555566655555555555555444
No 86
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.36 E-value=1.8e-11 Score=133.62 Aligned_cols=124 Identities=13% Similarity=0.114 Sum_probs=82.1
Q ss_pred EeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchh-HHHHH---HCCcEEEEEcccCCCCCChhhhhc
Q 004690 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS-RLSLL---DRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 491 ~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~---~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
+.+..|.++++....|++. ...|.||++||..+... .|... ...|+ .+||.|+++|+||+|.+...-
T Consensus 180 ~~~~~~~~l~~~~~gp~~~----~~k~~VVLlHG~~~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~--- 250 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDN----KAKEDVLFIHGFISSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA--- 250 (481)
T ss_pred eEeeCCeEEEEEEecCCCC----CCCCeEEEECCCCccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC---
Confidence 3334556666654444432 23477999999655432 24432 23343 479999999999998764320
Q ss_pred cccccCcChHHHHHHHHH-HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 567 GKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
....++++..+.+. .+++.- ..+++.++||||||++++.++.++|++++++|+.+|.
T Consensus 251 ----~~~ytl~~~a~~l~~~ll~~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 251 ----DSLYTLREHLEMIERSVLERY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred ----CCcCCHHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 11234566665552 444432 2368999999999999999999999999999988753
No 87
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.36 E-value=2.2e-11 Score=128.15 Aligned_cols=121 Identities=18% Similarity=0.116 Sum_probs=80.8
Q ss_pred EEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhcccc
Q 004690 490 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 569 (736)
Q Consensus 490 ~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~ 569 (736)
++...||.+|.... .+. ...+.||++||+.+.... ......+...+|.|+++|+||+|.+....
T Consensus 8 ~~~~~~~~~l~y~~---~g~----~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~------ 71 (306)
T TIGR01249 8 YLNVSDNHQLYYEQ---SGN----PDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPHA------ 71 (306)
T ss_pred eEEcCCCcEEEEEE---CcC----CCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCCC------
Confidence 45556777765432 111 113568999997665332 12223444579999999999988654211
Q ss_pred ccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 570 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 570 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
......++|+.+.+..+.+.- +.+++.++|+||||.+++.++.++|++++++|+..+
T Consensus 72 ~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 72 CLEENTTWDLVADIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred CcccCCHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 011234567777777766553 336799999999999999999999999888887654
No 88
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.36 E-value=8.9e-12 Score=127.43 Aligned_cols=187 Identities=18% Similarity=0.221 Sum_probs=111.8
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (736)
...|.||++||.++... .|...+..|. .+|.|+.+|.||+|++..... ..-..-.+|+.+.++++ .
T Consensus 14 ~~~~~iv~lhG~~~~~~--~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~-----~~~~~~~~d~~~~l~~l------~ 79 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD--NLGVLARDLV-NDHDIIQVDMRNHGLSPRDPV-----MNYPAMAQDLLDTLDAL------Q 79 (255)
T ss_pred CCCCCEEEECCCCCchh--HHHHHHHHHh-hCCeEEEECCCCCCCCCCCCC-----CCHHHHHHHHHHHHHHc------C
Confidence 45688999999766543 3555555554 579999999999987653210 00011223444444433 3
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCC-ccchh-----------hhccCC--------------CCC-----
Q 004690 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP-FVDVL-----------TTMLDP--------------TIP----- 642 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p-~~d~~-----------~~~~~~--------------~~p----- 642 (736)
.+++.++|||+||.++..++.++|++++++|+..+ ..+.. ..+... ...
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVI 159 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHH
Confidence 36799999999999999999999999999887532 11100 000000 000
Q ss_pred ------Ccccccc------------c-----cccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCC
Q 004690 643 ------LTTAEWE------------V-----KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 699 (736)
Q Consensus 643 ------~~~~~~~------------i-----~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 699 (736)
.....+. + .+....|+|+++|++|..|+...++.+.+.+. ..++++++ ++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~ 232 (255)
T PRK10673 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP----QARAHVIA---GA 232 (255)
T ss_pred HHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC----CcEEEEeC---CC
Confidence 0000000 0 01123579999999999999877666655443 34455554 99
Q ss_pred CcCCCCChHHHHHHHHHHHHHHHH
Q 004690 700 GHFSKSGRFERLREAAFTYTFLMR 723 (736)
Q Consensus 700 gH~~~~~~~~~~~~~a~~~~fl~~ 723 (736)
||.......+.+.+ .+..||.+
T Consensus 233 gH~~~~~~p~~~~~--~l~~fl~~ 254 (255)
T PRK10673 233 GHWVHAEKPDAVLR--AIRRYLND 254 (255)
T ss_pred CCeeeccCHHHHHH--HHHHHHhc
Confidence 99876544443333 25667754
No 89
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.35 E-value=5.7e-11 Score=127.27 Aligned_cols=244 Identities=19% Similarity=0.206 Sum_probs=148.9
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC-------------------ccceeEEeeCC-eEEEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-------------------VTASVEWAGNE-ALVYI 252 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~-------------------~~~~~~WspDg-~l~y~ 252 (736)
+..+.|||||++|||..+ .+||++++.+++.++++..+ ....+.||||| +|+|.
T Consensus 45 ~~~~~~sP~g~~~~~v~~------~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~ 118 (353)
T PF00930_consen 45 LQDAKWSPDGKYIAFVRD------NNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFL 118 (353)
T ss_dssp BSEEEE-SSSTEEEEEET------TEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEE
T ss_pred cccceeecCCCeeEEEec------CceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEE
Confidence 456899999999999985 36999999888776554322 23457899999 89999
Q ss_pred EeCCCCC-------------------------------CceEEEEEcCCCCCCcEEEEe--ecCCceEEEEEEcCCccEE
Q 004690 253 TMDEILR-------------------------------PDKAWLHKLEADQSNDICLYH--EKDDIYSLGLQASESKKFL 299 (736)
Q Consensus 253 ~~~~~~~-------------------------------~~~v~~~~l~t~~~~~~~~~~--~~~~~~~~~~~~S~Dg~~l 299 (736)
+.|+..- ..+|+++++.++......+-. .....+...+.|++|++.|
T Consensus 119 ~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l 198 (353)
T PF00930_consen 119 RFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRL 198 (353)
T ss_dssp EEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEE
T ss_pred EECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEE
Confidence 8864310 124556666655322111110 1234556778999999966
Q ss_pred EEEecC--cceeEEEEEeCCCCCceEEeecccc-c-e----eEEEe-eeCCEEEEEEcCCCCCCcEEEEEeCCCCCceee
Q 004690 300 FIASES--KITRFVFYLDVSKPEELRVLTPRVV-G-V----DTAAS-HRGNHFFITRRSDELFNSELLACPVDNTSETTV 370 (736)
Q Consensus 300 ~~~~~~--~~~~~l~~~dl~~~~~~~~l~~~~~-~-~----~~~~s-~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~ 370 (736)
++...+ .....++++|..++. .+.+..... + + ...+. ++++.+++++.++| ..+||.++.++. ..+.
T Consensus 199 ~~~~~nR~q~~~~l~~~d~~tg~-~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G--~~hly~~~~~~~-~~~~ 274 (353)
T PF00930_consen 199 WVQWLNRDQNRLDLVLCDASTGE-TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG--YRHLYLYDLDGG-KPRQ 274 (353)
T ss_dssp EEEEEETTSTEEEEEEEEECTTT-CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS--SEEEEEEETTSS-EEEE
T ss_pred EEEEcccCCCEEEEEEEECCCCc-eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC--CcEEEEEccccc-ceec
Confidence 666543 445678889998876 443332111 1 1 12233 78888988888764 679999999873 3445
Q ss_pred EecCCCCc-eeeeEEEeCCEEEEEEEeCC--eeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEE
Q 004690 371 LIPHRESV-KLQDIQLFIDHLAVYEREGG--LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFH 447 (736)
Q Consensus 371 l~~~~~~~-~i~~~~~~~~~l~~~~~~~g--~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~ 447 (736)
++....++ .+..++..++.++|....+. ..+|+.++++. ++.++.|+.. .... .....+++++.+...
T Consensus 275 lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~-~~~~~~LT~~------~~~~--~~~~~Spdg~y~v~~ 345 (353)
T PF00930_consen 275 LTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDS-GGEPKCLTCE------DGDH--YSASFSPDGKYYVDT 345 (353)
T ss_dssp SS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTE-TTEEEESSTT------SSTT--EEEEE-TTSSEEEEE
T ss_pred cccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCC-CCCeEeccCC------CCCc--eEEEECCCCCEEEEE
Confidence 66555544 34455556678888887644 44566665551 3333222211 1111 123456778999999
Q ss_pred eccCCCCc
Q 004690 448 YSSLRTPP 455 (736)
Q Consensus 448 ~ss~~~P~ 455 (736)
++++.+|+
T Consensus 346 ~s~~~~P~ 353 (353)
T PF00930_consen 346 YSGPDTPP 353 (353)
T ss_dssp EESSSSCE
T ss_pred EcCCCCCC
Confidence 99999985
No 90
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.35 E-value=5.1e-11 Score=123.59 Aligned_cols=106 Identities=17% Similarity=0.105 Sum_probs=73.7
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
.|.||++||+++.... .+......+.+.||.|+++|.||+|.+..... .....+++++.+.+..+++.. +.+
T Consensus 25 ~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~ 96 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPDD-----SDELWTIDYFVDELEEVREKL--GLD 96 (288)
T ss_pred CCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-----ccccccHHHHHHHHHHHHHHc--CCC
Confidence 4778999998765432 23333334444599999999999886532110 000234566666666665543 335
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
++.++|||+||.+++.++.++|+.++++|+..++
T Consensus 97 ~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 97 KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred cEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 7999999999999999999999999999987664
No 91
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.34 E-value=2.8e-11 Score=130.11 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=68.9
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
.|.||++||..+... .|...+..|.+ +|.|+++|+||.|.+...- ....+++++.+.+..+++.- ..+
T Consensus 88 gp~lvllHG~~~~~~--~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~-------~~~~~~~~~a~~l~~~l~~l--~~~ 155 (360)
T PLN02679 88 GPPVLLVHGFGASIP--HWRRNIGVLAK-NYTVYAIDLLGFGASDKPP-------GFSYTMETWAELILDFLEEV--VQK 155 (360)
T ss_pred CCeEEEECCCCCCHH--HHHHHHHHHhc-CCEEEEECCCCCCCCCCCC-------CccccHHHHHHHHHHHHHHh--cCC
Confidence 378999999654432 36666666654 8999999999999764310 01123444444433333321 236
Q ss_pred cEEEEEeChHHHHHHHHHH-hCCCceeEEEEcCC
Q 004690 596 KLCIEGRSAGGLLIGAVLN-MRPDLFKAAVAAVP 628 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~-~~p~~~~a~v~~~p 628 (736)
++.++|||+||++++.++. .+|++++++|+..+
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~ 189 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNC 189 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECC
Confidence 8999999999999988876 47999999998765
No 92
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.33 E-value=3.2e-11 Score=121.94 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=75.0
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHH-HHHHHHcCCCCCC
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKE 595 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~ 595 (736)
|+||++||..+... .|......|+ +||.|+++|.||.|++... .......++++... +..+.+.- +.+
T Consensus 2 ~~vv~~hG~~~~~~--~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGSGA--DWQALIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQL--GIE 70 (251)
T ss_pred CEEEEEcCCCCchh--hHHHHHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHHc--CCC
Confidence 78999999655433 3666667777 8999999999999876431 01122344555544 55554432 447
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCcc
Q 004690 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~ 630 (736)
++.++|||+||.++..++.++|+.++++++.++..
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 89999999999999999999999999999887643
No 93
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.33 E-value=2.8e-11 Score=130.88 Aligned_cols=141 Identities=19% Similarity=0.207 Sum_probs=111.4
Q ss_pred CceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCC-CCcCCCCC-----CchhHHHHHHCCcEEEEEcccCC
Q 004690 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGS-YEICNDPA-----FNSSRLSLLDRGFIFAIAQIRGG 556 (736)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg-~~~~~~~~-----~~~~~~~l~~~G~~v~~~d~RG~ 556 (736)
.+..+.+.++.+||++|.+.|+.|++. ++.|+++..+=. |....... ..+....|+.+||+|+..|.||.
T Consensus 16 ~~~~~~v~V~MRDGvrL~~dIy~Pa~~----g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~ 91 (563)
T COG2936 16 GYIERDVMVPMRDGVRLAADIYRPAGA----GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGR 91 (563)
T ss_pred ceeeeeeeEEecCCeEEEEEEEccCCC----CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccc
Confidence 367788999999999999999999875 789999988722 22211010 11111368999999999999999
Q ss_pred CCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchh
Q 004690 557 GELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 633 (736)
Q Consensus 557 g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~ 633 (736)
+++...|.-.. . ...+|-.++|+||.++.+++ .+|+.+|.|++|+...++|+..|.-.+|++...+..|+.
T Consensus 92 ~~SeG~~~~~~----~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 92 GGSEGVFDPES----S-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRY 162 (563)
T ss_pred ccCCcccceec----c-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccccc
Confidence 98877665322 2 35689999999999999987 799999999999999999988888889999999988853
No 94
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.32 E-value=1.4e-11 Score=124.35 Aligned_cols=171 Identities=18% Similarity=0.112 Sum_probs=106.2
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCc
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 596 (736)
|.||++||..+.. ..|......|. .+|.|+++|+||.|.+... ....++++ ++.+.+.. .++
T Consensus 5 ~~iv~~HG~~~~~--~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~~~~~~~~---~~~~~~~~---~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWGMNA--EVFRCLDEELS-AHFTLHLVDLPGHGRSRGF---------GPLSLADA---AEAIAAQA---PDP 66 (245)
T ss_pred ceEEEEcCCCCch--hhHHHHHHhhc-cCeEEEEecCCcCccCCCC---------CCcCHHHH---HHHHHHhC---CCC
Confidence 6789999954432 23555555554 5799999999998875321 11233444 44444432 268
Q ss_pred EEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccch------h--------h-h---ccC--------------CCCCCc
Q 004690 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV------L--------T-T---MLD--------------PTIPLT 644 (736)
Q Consensus 597 i~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~------~--------~-~---~~~--------------~~~p~~ 644 (736)
+.++|+|+||++++.++.++|++++++|+..+...+ . . + +.. ...+..
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA 146 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999998876543211 0 0 0 000 000000
Q ss_pred c---------------c---c----cc----------ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEE
Q 004690 645 T---------------A---E----WE----------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 692 (736)
Q Consensus 645 ~---------------~---~----~~----------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~ 692 (736)
. . . +. +.+ ...|+|+++|.+|..||++..+.+.+.+. ..+++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~ 221 (245)
T TIGR01738 147 RQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQN-ISVPFLRLYGYLDGLVPAKVVPYLDKLAP----HSELYI 221 (245)
T ss_pred chHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhc-CCCCEEEEeecCCcccCHHHHHHHHHhCC----CCeEEE
Confidence 0 0 0 00 122 34569999999999999988877766553 344555
Q ss_pred EEecCCCCcCCCCChHHHHHH
Q 004690 693 FKCELGAGHFSKSGRFERLRE 713 (736)
Q Consensus 693 ~~~~~~~gH~~~~~~~~~~~~ 713 (736)
++ ++||.......+.+.+
T Consensus 222 ~~---~~gH~~~~e~p~~~~~ 239 (245)
T TIGR01738 222 FA---KAAHAPFLSHAEAFCA 239 (245)
T ss_pred eC---CCCCCccccCHHHHHH
Confidence 54 8999876554444433
No 95
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.32 E-value=3.5e-11 Score=129.11 Aligned_cols=112 Identities=14% Similarity=0.083 Sum_probs=75.3
Q ss_pred CcEEEEecCCCCcCCCC---------CCchhH---HHHHHCCcEEEEEcccC--CCCCCh-hhhhcccc---ccCcChHH
Q 004690 516 DPLLLYGYGSYEICNDP---------AFNSSR---LSLLDRGFIFAIAQIRG--GGELGR-QWYENGKF---LKKKNTFT 577 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~RG--~g~~g~-~~~~~~~~---~~~~~~~~ 577 (736)
.|.||++||..++.... .|.... ..|...+|.|+++|+|| +|..+. .+...+.. .....+++
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 47899999965543111 133332 25667899999999999 454442 22211111 11134677
Q ss_pred HHHHHHHHHHHcCCCCCCc-EEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 578 DFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 578 D~~~~~~~l~~~~~~d~~r-i~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
|+.+.+..+++.-. -++ +.++|+||||.+++.++.++|++++++|+.++.
T Consensus 111 ~~~~~~~~~~~~l~--~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 111 DDVKAQKLLLDHLG--IEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred HHHHHHHHHHHHcC--CCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 88777766665432 256 999999999999999999999999998887654
No 96
>PRK06489 hypothetical protein; Provisional
Probab=99.31 E-value=4.2e-11 Score=128.91 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=69.9
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHH-------HHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHH-HHHHH
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLS-------LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLI 587 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~-------l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~ 587 (736)
.|.||++||+.+....+.-...... +..++|.|+++|+||+|.+...-.. .........++|+.+. ++.+.
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~-~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG-LRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC-CCCCCCcccHHHHHHHHHHHHH
Confidence 5789999997665432210112222 2357899999999999875321000 0000112456677654 34444
Q ss_pred HcCCCCCCcEE-EEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 588 KNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 588 ~~~~~d~~ri~-~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
+.-.+ +++. ++|+||||++++.++.++|++++++|+.++
T Consensus 148 ~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 148 EGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred HhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 43222 5664 899999999999999999999999998765
No 97
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.31 E-value=6.5e-11 Score=122.05 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=76.4
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (736)
+..|.||++||..... ..|......|.++||.|+++|+||+|..... .....++++..+.+..++++-. .
T Consensus 16 ~~~p~vvliHG~~~~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-------~~~~~~~~~~~~~l~~~i~~l~-~ 85 (273)
T PLN02211 16 RQPPHFVLIHGISGGS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-------ADSVTTFDEYNKPLIDFLSSLP-E 85 (273)
T ss_pred CCCCeEEEECCCCCCc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCC-------cccCCCHHHHHHHHHHHHHhcC-C
Confidence 4568999999965543 3477777788889999999999998864211 0112345555554444443311 1
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
.+++.++||||||.++..++.++|++++++|..++.
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 368999999999999999999999999999988664
No 98
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.31 E-value=1.9e-11 Score=121.65 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=75.0
Q ss_pred EEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEE
Q 004690 519 LLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 598 (736)
Q Consensus 519 vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~ 598 (736)
||++||..+.. ..|...+..| .+||.|+++|+||.|.+..... ....++++..+.+..+++.- ..+++.
T Consensus 1 vv~~hG~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~l~~~l~~~--~~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPD------YSPYSIEDYAEDLAELLDAL--GIKKVI 69 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSS------GSGGSHHHHHHHHHHHHHHT--TTSSEE
T ss_pred eEEECCCCCCH--HHHHHHHHHH-hCCCEEEEEecCCccccccccc------cCCcchhhhhhhhhhccccc--cccccc
Confidence 78999966654 4477777777 5899999999999887654211 12234455555544444432 226899
Q ss_pred EEEeChHHHHHHHHHHhCCCceeEEEEcCCccc
Q 004690 599 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 631 (736)
Q Consensus 599 ~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d 631 (736)
++|||+||.+++.++.++|+.++++|+.+|...
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccccccceeeccccc
Confidence 999999999999999999999999999998875
No 99
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.31 E-value=1e-10 Score=127.18 Aligned_cols=106 Identities=18% Similarity=0.146 Sum_probs=69.9
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHH-HHHHHHcCCCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCT 593 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d 593 (736)
..|.||++||..+.. ..|...+..|++ +|.|+++|+||+|.+.+.-.. ........+.+++. .+|+... +
T Consensus 104 ~~p~vvllHG~~~~~--~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~---~~~~~~~~~~~~~~i~~~~~~l---~ 174 (402)
T PLN02894 104 DAPTLVMVHGYGASQ--GFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFT---CKSTEETEAWFIDSFEEWRKAK---N 174 (402)
T ss_pred CCCEEEEECCCCcch--hHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcc---cccHHHHHHHHHHHHHHHHHHc---C
Confidence 468999999964432 224445556654 699999999999976532110 00001111223333 3444333 3
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
.+++.++||||||++++.++.++|+.++++|+..|.
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 368999999999999999999999999998887653
No 100
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.31 E-value=3.1e-11 Score=130.92 Aligned_cols=102 Identities=14% Similarity=0.130 Sum_probs=75.4
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
..|.||++||..+... .|......|. ++|.|+++|+||+|.+... .....++++.+.+..+++. .++
T Consensus 130 ~~~~vl~~HG~~~~~~--~~~~~~~~l~-~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--~~~ 196 (371)
T PRK14875 130 DGTPVVLIHGFGGDLN--NWLFNHAALA-AGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--LGI 196 (371)
T ss_pred CCCeEEEECCCCCccc--hHHHHHHHHh-cCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--cCC
Confidence 4578999998544332 2444444554 4699999999999876431 1234567777777666654 355
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
.++.++|||+||+++..++.++|+.++++|+.+|.
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred ccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 78999999999999999999999999999988764
No 101
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.31 E-value=4.1e-10 Score=121.53 Aligned_cols=189 Identities=13% Similarity=0.101 Sum_probs=133.1
Q ss_pred CCCcEEEEEEEECCCCCeecccccC-ccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEE
Q 004690 212 KGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLG 289 (736)
Q Consensus 212 ~G~e~~~l~v~dl~tg~~~~~~~~~-~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~ 289 (736)
.+.-.++|++.|-++-.....+... ..-.+.|+||+ .++|....... +.++|++++.++... .+.... .....
T Consensus 168 ~~~~~~~l~~~D~dg~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~-~~~i~~~~l~~g~~~--~i~~~~--g~~~~ 242 (425)
T COG0823 168 GGPLPYELALGDYDGYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGG-CPRIYYLDLNTGKRP--VILNFN--GNNGA 242 (425)
T ss_pred cCCCCceEEEEccCCcceeEecccCcceeccccCcCCCceEEEEEecCC-CceEEEEeccCCccc--eeeccC--CccCC
Confidence 4555689999998843333333222 23458999999 89998775432 257999999988543 333322 22235
Q ss_pred EEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc-cceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCce
Q 004690 290 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET 368 (736)
Q Consensus 290 ~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~ 368 (736)
+.|||||++|+|.....+..+||++|+.++. .+.|+... .+..+.|+|||++++|.+++.|.+ +||++++++.. .
T Consensus 243 P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p--~I~~~~~~g~~-~ 318 (425)
T COG0823 243 PAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRP--QIYLYDLEGSQ-V 318 (425)
T ss_pred ccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCc--ceEEECCCCCc-e
Confidence 7899999999999988899999999999887 55555432 223567999999999999998754 79999998743 3
Q ss_pred eeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004690 369 TVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 369 ~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
+.++..........++++++++++....+|...+.++++..
T Consensus 319 ~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 319 TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLAS 359 (425)
T ss_pred eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCC
Confidence 44554444444667788888998888666665566666653
No 102
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.30 E-value=4.5e-11 Score=128.18 Aligned_cols=109 Identities=20% Similarity=0.188 Sum_probs=77.2
Q ss_pred CCcEEEEecCCCCcCC---CCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCC
Q 004690 515 SDPLLLYGYGSYEICN---DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 591 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~---~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 591 (736)
+.| ||++||...... ...+...+..|+++||.|+++|+||.|.....+ .......+|+.++++++.++.
T Consensus 62 ~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~------~~~d~~~~~~~~~v~~l~~~~- 133 (350)
T TIGR01836 62 KTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL------TLDDYINGYIDKCVDYICRTS- 133 (350)
T ss_pred CCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC------CHHHHHHHHHHHHHHHHHHHh-
Confidence 345 777888422111 112346678899999999999999876432211 000111245778899998764
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccch
Q 004690 592 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 632 (736)
Q Consensus 592 ~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~ 632 (736)
..+++.++|||+||.+++.++..+|+.++++|+.++.+++
T Consensus 134 -~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 134 -KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred -CCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 3368999999999999999999999999999998887764
No 103
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.29 E-value=3.7e-11 Score=124.98 Aligned_cols=101 Identities=16% Similarity=0.121 Sum_probs=74.1
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
.|.||++||..... ..|......| .++|.|+++|+||.|.++..- .....++++.+.+..+++.. +.+
T Consensus 34 ~~~iv~lHG~~~~~--~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~ 101 (286)
T PRK03204 34 GPPILLCHGNPTWS--FLYRDIIVAL-RDRFRCVAPDYLGFGLSERPS-------GFGYQIDEHARVIGEFVDHL--GLD 101 (286)
T ss_pred CCEEEEECCCCccH--HHHHHHHHHH-hCCcEEEEECCCCCCCCCCCC-------ccccCHHHHHHHHHHHHHHh--CCC
Confidence 47899999965322 2344444444 457999999999998764311 11234678888888777653 336
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
++.++|||+||.++..++..+|++++++|+..+
T Consensus 102 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~ 134 (286)
T PRK03204 102 RYLSMGQDWGGPISMAVAVERADRVRGVVLGNT 134 (286)
T ss_pred CEEEEEECccHHHHHHHHHhChhheeEEEEECc
Confidence 799999999999999999999999999887655
No 104
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.28 E-value=4.5e-11 Score=110.88 Aligned_cols=201 Identities=14% Similarity=0.147 Sum_probs=134.2
Q ss_pred EEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhh
Q 004690 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 565 (736)
Q Consensus 486 ~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 565 (736)
...+.++.+.+.++-+.+ ...+..-++|+.||.-...........+.+|.+.|+.++.+|++|.|++...++-
T Consensus 10 ~~~ivi~n~~ne~lvg~l-------h~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~ 82 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLL-------HETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY 82 (269)
T ss_pred eeEEEeccCCCchhhcce-------eccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc
Confidence 455666666555544421 1235567899999943333333334455688889999999999999998777663
Q ss_pred ccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhcc---CCC--
Q 004690 566 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---DPT-- 640 (736)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~---~~~-- 640 (736)
.+.....+|+..+++++..... ---+|+|||-||..++..+..+++ +.-+|..+|-.|...... .+.
T Consensus 83 ----Gn~~~eadDL~sV~q~~s~~nr---~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l 154 (269)
T KOG4667|consen 83 ----GNYNTEADDLHSVIQYFSNSNR---VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYL 154 (269)
T ss_pred ----CcccchHHHHHHHHHHhccCce---EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHH
Confidence 2333445999999999987432 234789999999999999999887 577888888777543321 000
Q ss_pred ----------CCCcccccc---------------cc----cc-ccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCe
Q 004690 641 ----------IPLTTAEWE---------------VK----AQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 690 (736)
Q Consensus 641 ----------~p~~~~~~~---------------i~----~~-~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~ 690 (736)
.+....+|. +. .+ ...+||-+||..|.+||.+.|.+|+..+.. .++
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L 230 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKL 230 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC----Cce
Confidence 011011111 11 12 234599999999999999999999887764 334
Q ss_pred EEEEecCCCCcCCCCChH
Q 004690 691 LLFKCELGAGHFSKSGRF 708 (736)
Q Consensus 691 ~~~~~~~~~gH~~~~~~~ 708 (736)
.++ +|+.|.+.....
T Consensus 231 ~iI---EgADHnyt~~q~ 245 (269)
T KOG4667|consen 231 EII---EGADHNYTGHQS 245 (269)
T ss_pred EEe---cCCCcCccchhh
Confidence 455 499998865443
No 105
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.28 E-value=6.1e-11 Score=121.42 Aligned_cols=94 Identities=18% Similarity=0.218 Sum_probs=67.8
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCc
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 596 (736)
|.||++||..+.. ..|......|. ..|.|+++|+||+|.+.. + ...+++++. +.+.+.. .++
T Consensus 14 ~~ivllHG~~~~~--~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~-~--------~~~~~~~~~---~~l~~~~---~~~ 75 (256)
T PRK10349 14 VHLVLLHGWGLNA--EVWRCIDEELS-SHFTLHLVDLPGFGRSRG-F--------GALSLADMA---EAVLQQA---PDK 75 (256)
T ss_pred CeEEEECCCCCCh--hHHHHHHHHHh-cCCEEEEecCCCCCCCCC-C--------CCCCHHHHH---HHHHhcC---CCC
Confidence 5699999954433 34666666665 459999999999987532 1 112344443 3444432 378
Q ss_pred EEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 597 i~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
+.++|||+||.++..+|.++|++++.+|+..+
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~ 107 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVAS 107 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecC
Confidence 99999999999999999999999999987655
No 106
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.28 E-value=3.6e-11 Score=112.80 Aligned_cols=184 Identities=16% Similarity=0.147 Sum_probs=125.2
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCC--CC------hhhhhccccccCcChHHHHHHHHHHHHH
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE--LG------RQWYENGKFLKKKNTFTDFIACAEYLIK 588 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~--~g------~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (736)
-+||.+---||.+.. .-...+..++..||.|++||+-.+.- .+ ..|.+ ...-...+.|+.+.++||+.
T Consensus 40 ~~li~i~DvfG~~~~-n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~---~~~~~~~~~~i~~v~k~lk~ 115 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFP-NTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK---GHSPPKIWKDITAVVKWLKN 115 (242)
T ss_pred eEEEEEEeeeccccH-HHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh---cCCcccchhHHHHHHHHHHH
Confidence 466666665554332 12334557788899999999865411 11 12322 23334567999999999998
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc-cchhhhccCCCCCCccccccccccccccEEEeecCCCC
Q 004690 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF-VDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAGLNDP 667 (736)
Q Consensus 589 ~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~-~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G~~D~ 667 (736)
+| ++.+|+++|+++||-++..+....| +|.|+|+.+|. +|.. + +.. ...|+|++.|+.|.
T Consensus 116 ~g--~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~~----D-----------~~~-vk~Pilfl~ae~D~ 176 (242)
T KOG3043|consen 116 HG--DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDSA----D-----------IAN-VKAPILFLFAELDE 176 (242)
T ss_pred cC--CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCChh----H-----------Hhc-CCCCEEEEeecccc
Confidence 77 4589999999999998888888776 78888888873 2311 0 122 33569999999999
Q ss_pred CCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCC-------ChHH-HHH-HHHHHHHHHHHhc
Q 004690 668 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS-------GRFE-RLR-EAAFTYTFLMRAL 725 (736)
Q Consensus 668 ~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~-------~~~~-~~~-~~a~~~~fl~~~l 725 (736)
.+|+.....+-++|.+...-. ..+.++++.+|++.. +... ..+ ...+...||.+++
T Consensus 177 ~~p~~~v~~~ee~lk~~~~~~--~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 177 DVPPKDVKAWEEKLKENPAVG--SQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCHHHHHHHHHHHhcCcccc--eeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 999999988888887764322 345566799999863 1111 222 2555788888775
No 107
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.26 E-value=1.9e-10 Score=119.53 Aligned_cols=140 Identities=19% Similarity=0.158 Sum_probs=101.5
Q ss_pred ceEEEEEEeCCCCeEEeEEEEEecCCccC---CCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCC
Q 004690 484 YFTERKWASASDGTQIPICIVYRKNLVKL---DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 560 (736)
Q Consensus 484 ~~~~~~~~~s~dG~~i~~~~~~p~~~~~~---~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g 560 (736)
..-++..++.+||..+-...+.+.+. .. .+..|+||++||-.|++...+-......+.++||.|+++|.||.++..
T Consensus 91 ~~y~Reii~~~DGG~~~lDW~~~~~~-~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~ 169 (409)
T KOG1838|consen 91 VEYTREIIKTSDGGTVTLDWVENPDS-RCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSK 169 (409)
T ss_pred CcceeEEEEeCCCCEEEEeeccCccc-ccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCc
Confidence 34577778888998888877766554 21 356799999999888887755455556677789999999999977642
Q ss_pred hhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEcCCcc
Q 004690 561 RQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR---PDLFKAAVAAVPFV 630 (736)
Q Consensus 561 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~---p~~~~a~v~~~p~~ 630 (736)
-.-. ...-...-+|+.++++++.++..- .++.++|+||||.+....+.+. ..+.+|++..+|+-
T Consensus 170 LtTp----r~f~ag~t~Dl~~~v~~i~~~~P~--a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 170 LTTP----RLFTAGWTEDLREVVNHIKKRYPQ--APLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred cCCC----ceeecCCHHHHHHHHHHHHHhCCC--CceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 1100 111122348999999999988532 4799999999999999888763 34677777777753
No 108
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.25 E-value=2.2e-10 Score=115.17 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=75.0
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHH-HHcCCCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL-IKNCYCT 593 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d 593 (736)
..+.+|++|| ||.+..- |-..+..|+. ...|.++|..|.|.+.+.-.. ......-+.+++.++.- ++++.
T Consensus 89 ~~~plVliHG-yGAg~g~-f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~----~d~~~~e~~fvesiE~WR~~~~L-- 159 (365)
T KOG4409|consen 89 NKTPLVLIHG-YGAGLGL-FFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFS----IDPTTAEKEFVESIEQWRKKMGL-- 159 (365)
T ss_pred CCCcEEEEec-cchhHHH-HHHhhhhhhh-cCceEEecccCCCCCCCCCCC----CCcccchHHHHHHHHHHHHHcCC--
Confidence 3445778898 5554332 5555667777 899999999998876553221 11122234666666544 45554
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
+++.|+|||+||+|+...|.++|++++-+|+..|.
T Consensus 160 -~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 160 -EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred -cceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 69999999999999999999999999999998874
No 109
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.25 E-value=2e-10 Score=124.29 Aligned_cols=203 Identities=15% Similarity=0.079 Sum_probs=124.0
Q ss_pred CcEEEEecCCCCcCCCC-----------CCchhH---HHHHHCCcEEEEEcccCC-C-CCChhhhhc--ccc---ccCcC
Q 004690 516 DPLLLYGYGSYEICNDP-----------AFNSSR---LSLLDRGFIFAIAQIRGG-G-ELGRQWYEN--GKF---LKKKN 574 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~-----------~~~~~~---~~l~~~G~~v~~~d~RG~-g-~~g~~~~~~--~~~---~~~~~ 574 (736)
.|.||++||..+..... .|.... ..|...+|.|+++|++|+ + ..+...... +.. .....
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 58899999976654321 122222 134467999999999984 3 223211100 000 01134
Q ss_pred hHHHHHHHHHHHHHcCCCCCCc-EEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchh-----------hh-ccC---
Q 004690 575 TFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-----------TT-MLD--- 638 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~r-i~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~-----------~~-~~~--- 638 (736)
+++|+.+.+..+++.-.+ ++ +.++|+||||.+++.++.++|++++++|+.++..... .. ..+
T Consensus 128 ~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 128 TIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDW 205 (379)
T ss_pred CHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 677887777766655323 56 5899999999999999999999999998876532110 00 000
Q ss_pred --------------------------------------C----CCC-------Cccccc--------c------------
Q 004690 639 --------------------------------------P----TIP-------LTTAEW--------E------------ 649 (736)
Q Consensus 639 --------------------------------------~----~~p-------~~~~~~--------~------------ 649 (736)
. ..+ .....+ .
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 0 000 000000 0
Q ss_pred -------cc-----------ccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHH
Q 004690 650 -------VK-----------AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 711 (736)
Q Consensus 650 -------i~-----------~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 711 (736)
+. .....|+||++|++|..+|+..++++++.+...+..++++.++ +++||.......+.+
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~--~~~GH~~~le~p~~~ 363 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEID--SPYGHDAFLLDDPRY 363 (379)
T ss_pred HHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeC--CCCCchhHhcCHHHH
Confidence 00 0124479999999999999999999999998766554444442 379998765555544
Q ss_pred HHHHHHHHHHHHh
Q 004690 712 REAAFTYTFLMRA 724 (736)
Q Consensus 712 ~~~a~~~~fl~~~ 724 (736)
.+ .+.+||.+.
T Consensus 364 ~~--~L~~FL~~~ 374 (379)
T PRK00175 364 GR--LVRAFLERA 374 (379)
T ss_pred HH--HHHHHHHhh
Confidence 43 367888764
No 110
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.24 E-value=5.8e-11 Score=116.99 Aligned_cols=148 Identities=23% Similarity=0.224 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhh---ccCC--CCC---Cccc-
Q 004690 576 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT---MLDP--TIP---LTTA- 646 (736)
Q Consensus 576 ~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~---~~~~--~~p---~~~~- 646 (736)
++=|..|++||.++..+++++|+|+|.|.||-+|+.+|...| .++|+|+.+|..-.... .... .+| ....
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 466889999999999999999999999999999999999998 78999998884332210 0000 000 0000
Q ss_pred ----------c---cc-------------ccccccccEEEeecCCCCCCCChHHH-HHHHHHHhcCCCCCeEEEEecCCC
Q 004690 647 ----------E---WE-------------VKAQNYPHILVTAGLNDPRVMYSEPA-KFVAKLREMKTDDNILLFKCELGA 699 (736)
Q Consensus 647 ----------~---~~-------------i~~~~~ppvLi~~G~~D~~Vp~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~ 699 (736)
. +. +.+ ...|+|+++|++|...|-.... .+.++|++++.+..... ..|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~-i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~-l~Y~~a 159 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEK-IKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEH-LSYPGA 159 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG---SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EE-EEETTB
T ss_pred ceecCCcceehhhhhhcccccccccccccHHH-cCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceE-EEcCCC
Confidence 0 00 222 3456999999999999866544 56678998887643322 335699
Q ss_pred CcCCCCCh--------------------------HHHHHHHHHHHHHHHHhcC
Q 004690 700 GHFSKSGR--------------------------FERLREAAFTYTFLMRALS 726 (736)
Q Consensus 700 gH~~~~~~--------------------------~~~~~~~a~~~~fl~~~l~ 726 (736)
||....+. ....+.+..+++||.++|+
T Consensus 160 GH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 160 GHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp -S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99763221 0233446668999999987
No 111
>PRK07581 hypothetical protein; Validated
Probab=99.23 E-value=1.6e-10 Score=123.57 Aligned_cols=109 Identities=17% Similarity=0.107 Sum_probs=68.0
Q ss_pred CCcEEEEecCCCCcCCCCCCchhH---HHHHHCCcEEEEEcccCCCCCChhhhhccccc---c-CcChHHHHHHHHHHHH
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSR---LSLLDRGFIFAIAQIRGGGELGRQWYENGKFL---K-KKNTFTDFIACAEYLI 587 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~---~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~---~-~~~~~~D~~~~~~~l~ 587 (736)
..|+||+.||+.+.... +.... ..|...+|.|+++|+||+|.+........... . .....+|+.+....|.
T Consensus 40 ~~~~vll~~~~~~~~~~--~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD--NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCccc--chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 34677777765443322 22211 24556799999999999997653221100000 0 0111245555445555
Q ss_pred H-cCCCCCCcE-EEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 588 K-NCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 588 ~-~~~~d~~ri-~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
+ .+. +++ .++|+||||++++.++.++|++++++|+.++
T Consensus 118 ~~lgi---~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 118 EKFGI---ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred HHhCC---CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 4 343 674 7899999999999999999999999887743
No 112
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.23 E-value=9.4e-11 Score=118.85 Aligned_cols=98 Identities=12% Similarity=0.068 Sum_probs=69.7
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCc
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 596 (736)
|.||++||..+... .|......| .+|.|+++|+||.|.+... . ...++++.+.+..+++.. ..++
T Consensus 3 p~vvllHG~~~~~~--~w~~~~~~l--~~~~vi~~D~~G~G~S~~~--~-------~~~~~~~~~~l~~~l~~~--~~~~ 67 (242)
T PRK11126 3 PWLVFLHGLLGSGQ--DWQPVGEAL--PDYPRLYIDLPGHGGSAAI--S-------VDGFADVSRLLSQTLQSY--NILP 67 (242)
T ss_pred CEEEEECCCCCChH--HHHHHHHHc--CCCCEEEecCCCCCCCCCc--c-------ccCHHHHHHHHHHHHHHc--CCCC
Confidence 67999999665543 466666665 4799999999999876431 0 113455554444444432 2368
Q ss_pred EEEEEeChHHHHHHHHHHhCCC-ceeEEEEcCCc
Q 004690 597 LCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPF 629 (736)
Q Consensus 597 i~~~G~S~GG~la~~~~~~~p~-~~~a~v~~~p~ 629 (736)
+.++||||||.+++.++.++|+ +++++|+.++.
T Consensus 68 ~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred eEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 9999999999999999999865 48988876644
No 113
>PLN02578 hydrolase
Probab=99.22 E-value=2.8e-10 Score=122.12 Aligned_cols=99 Identities=13% Similarity=0.069 Sum_probs=66.4
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCc
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 596 (736)
|.||++||..+.. ..|......|+ .+|.|+++|+||+|.+...... . ....-.+|+.+.++.+. .++
T Consensus 87 ~~vvliHG~~~~~--~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~---~-~~~~~a~~l~~~i~~~~------~~~ 153 (354)
T PLN02578 87 LPIVLIHGFGASA--FHWRYNIPELA-KKYKVYALDLLGFGWSDKALIE---Y-DAMVWRDQVADFVKEVV------KEP 153 (354)
T ss_pred CeEEEECCCCCCH--HHHHHHHHHHh-cCCEEEEECCCCCCCCCCcccc---c-CHHHHHHHHHHHHHHhc------cCC
Confidence 5578999954432 23444455554 5799999999999976543211 0 00001133444443332 267
Q ss_pred EEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 597 i~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
+.++|||+||+++..+|.++|++++++|+.++
T Consensus 154 ~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 154 AVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred eEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 99999999999999999999999999987654
No 114
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.22 E-value=9.8e-10 Score=110.38 Aligned_cols=104 Identities=18% Similarity=0.179 Sum_probs=75.7
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (736)
+..|+|+++||.+..... |......|+.+||.|+++|.||.|.+...-+-... .-.....|+++.++.|-
T Consensus 42 ~~gP~illlHGfPe~wys--wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Y--t~~~l~~di~~lld~Lg------ 111 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYS--WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEY--TIDELVGDIVALLDHLG------ 111 (322)
T ss_pred CCCCEEEEEccCCccchh--hhhhhhhhhhcceEEEecCCCCCCCCCCCCCccee--eHHHHHHHHHHHHHHhc------
Confidence 457999999997765544 55556789999999999999998875432110000 00122345555555553
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcC
Q 004690 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 627 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~ 627 (736)
-+|+.++||++|+.++..++..+|+++.+.|+..
T Consensus 112 ~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~n 145 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLN 145 (322)
T ss_pred cceeEEEeccchhHHHHHHHHhChhhcceEEEec
Confidence 2799999999999999999999999999988664
No 115
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.19 E-value=1.4e-09 Score=117.53 Aligned_cols=198 Identities=15% Similarity=0.076 Sum_probs=120.5
Q ss_pred EEEEEeCC-CCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCC----cEEEEEcccCCCCCCh
Q 004690 487 ERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRG----FIFAIAQIRGGGELGR 561 (736)
Q Consensus 487 ~~~~~~s~-dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G----~~v~~~d~RG~g~~g~ 561 (736)
+.+.+.|. -|.+..++++.|++. . .++.|+|+++||..+..... .......|.+.| .+++.+|.........
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y-~-~~~~PvlyllDG~~w~~~~~-~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~ 257 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDA-A-PEERPLAILLDGQFWAESMP-VWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ 257 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCC-C-CCCCCEEEEEECHHhhhcCC-HHHHHHHHHHcCCCCceEEEEECCCCcccccc
Confidence 44555553 356678888999876 4 46799999999976543322 223345677777 3467777532111111
Q ss_pred hhhhccccccCcChHHHHH--HHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhcc
Q 004690 562 QWYENGKFLKKKNTFTDFI--ACAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML 637 (736)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~--~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~ 637 (736)
. ......+.+++ ..+-++.++. ..|+++.+|.|+||||+.++.++.++|++|.++++.+|-+-+....
T Consensus 258 e-------l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~- 329 (411)
T PRK10439 258 E-------LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRG- 329 (411)
T ss_pred c-------CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCcc-
Confidence 0 01112233322 2445555542 3578899999999999999999999999999999999854211100
Q ss_pred CCCCCCccccccccc----cccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcC
Q 004690 638 DPTIPLTTAEWEVKA----QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 702 (736)
Q Consensus 638 ~~~~p~~~~~~~i~~----~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 702 (736)
.......... +.. .....++|.+|..|... ....+++++.|+++|.++.+. +++ +||.
T Consensus 330 ~~~~~~l~~~--l~~~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~---~~~-GGHd 391 (411)
T PRK10439 330 GQQEGVLLEQ--LKAGEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWR---QVD-GGHD 391 (411)
T ss_pred CCchhHHHHH--HHhcccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEE---ECC-CCcC
Confidence 0000000000 111 12235889999998643 567899999999999776443 333 5894
No 116
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.19 E-value=3.2e-10 Score=117.01 Aligned_cols=180 Identities=20% Similarity=0.264 Sum_probs=117.5
Q ss_pred hHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHH-cCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004690 537 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK-NCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (736)
Q Consensus 537 ~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~ri~~~G~S~GG~la~~~~~~ 615 (736)
....|+++||+|+++||-|-|. .|.. ++ ......-|.+.|++.+.. .+.....+++++|+|.||.-+++++..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~---~y~~-~~--~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGT---PYLN-GR--SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCC---cccC-cH--hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 3457889999999999998765 2221 11 111234555555555544 344344799999999999998887744
Q ss_pred ----CCCc---eeEEEEcCCccchhhhccC---------------------CCC--------------------------
Q 004690 616 ----RPDL---FKAAVAAVPFVDVLTTMLD---------------------PTI-------------------------- 641 (736)
Q Consensus 616 ----~p~~---~~a~v~~~p~~d~~~~~~~---------------------~~~-------------------------- 641 (736)
.||+ +.++++..|..|+...+.. +++
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~ 171 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLAD 171 (290)
T ss_pred hHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHH
Confidence 5666 6888888888886432210 000
Q ss_pred --------CCccc---------------ccc-------c---cc-cccccEEEeecCCCCCCCChHHHHHHHHHHhcC-C
Q 004690 642 --------PLTTA---------------EWE-------V---KA-QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK-T 686 (736)
Q Consensus 642 --------p~~~~---------------~~~-------i---~~-~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~-~ 686 (736)
.+... .+. + .. ....||+|.||.+|..||+..+.++++++.+.| .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a 251 (290)
T PF03583_consen 172 IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA 251 (290)
T ss_pred HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Confidence 00000 000 2 01 124589999999999999999999999999999 6
Q ss_pred CCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcCCCCC
Q 004690 687 DDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 730 (736)
Q Consensus 687 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~~~~~ 730 (736)
++++ ..+++.+|.... .....+.++||.+.|.....
T Consensus 252 ~V~~---~~~~~~~H~~~~-----~~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 252 DVEY---VRYPGGGHLGAA-----FASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred CEEE---EecCCCChhhhh-----hcCcHHHHHHHHHHHCCCCC
Confidence 7654 444588996432 12234467999999976544
No 117
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.17 E-value=2.1e-10 Score=105.51 Aligned_cols=189 Identities=19% Similarity=0.187 Sum_probs=128.0
Q ss_pred CCcEEEEecCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (736)
..|++|++|||||........- ....+..+||.|+.++|--+.+ ...-..++.|+...++|+.+.-. +
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q----------~htL~qt~~~~~~gv~filk~~~-n 134 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ----------VHTLEQTMTQFTHGVNFILKYTE-N 134 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc----------cccHHHHHHHHHHHHHHHHHhcc-c
Confidence 4689999999999877654433 3456778999999998843322 11113467899999999987632 4
Q ss_pred CCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEcCCccchhhhcc---CCCCCCcccccc--------ccccccccEEEe
Q 004690 594 KEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTTML---DPTIPLTTAEWE--------VKAQNYPHILVT 661 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~~~~~-~p~~~~a~v~~~p~~d~~~~~~---~~~~p~~~~~~~--------i~~~~~ppvLi~ 661 (736)
.+.|.+-|||+|++|++.+..+ +..++.++++.+|++++..... ...+.++..+-+ ... ..-++||+
T Consensus 135 ~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~-v~~~ilVv 213 (270)
T KOG4627|consen 135 TKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTD-VTVWILVV 213 (270)
T ss_pred ceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcC-ceeeeeEe
Confidence 5779999999999999877764 4457899999999999764322 112222222211 222 33459999
Q ss_pred ecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHh
Q 004690 662 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 662 ~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~ 724 (736)
.|.+|.---.+|.+.|++.++++. +-+++ +.+|.-.. .+.+....++..|+.+-
T Consensus 214 ~~~~espklieQnrdf~~q~~~a~----~~~f~---n~~hy~I~--~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 214 AAEHESPKLIEQNRDFADQLRKAS----FTLFK---NYDHYDII--EETAIDDSDVSRFLRNI 267 (270)
T ss_pred eecccCcHHHHhhhhHHHHhhhcc----eeecC---CcchhhHH--HHhccccchHHHHHHHH
Confidence 999999888999999999998753 33554 88996421 11222233456666654
No 118
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.17 E-value=7.5e-10 Score=118.41 Aligned_cols=166 Identities=14% Similarity=0.056 Sum_probs=100.4
Q ss_pred HHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCc-EEEEEeChHHHHHHHHHHhCCC
Q 004690 540 SLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPD 618 (736)
Q Consensus 540 ~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r-i~~~G~S~GG~la~~~~~~~p~ 618 (736)
.|...+|.|+++|+||+|+.... ...++|+.+.+..+++.-.+ ++ +.++|+||||++++.++.++|+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~~----------~~~~~~~a~dl~~ll~~l~l--~~~~~lvG~SmGG~vA~~~A~~~P~ 161 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLDV----------PIDTADQADAIALLLDALGI--ARLHAFVGYSYGALVGLQFASRHPA 161 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCCC----------CCCHHHHHHHHHHHHHHcCC--CcceEEEEECHHHHHHHHHHHHChH
Confidence 35456899999999998754211 11234444444444433222 34 5799999999999999999999
Q ss_pred ceeEEEEcCCccch-------h---hh----------------------c---c---------CCCCCCc----ccccc-
Q 004690 619 LFKAAVAAVPFVDV-------L---TT----------------------M---L---------DPTIPLT----TAEWE- 649 (736)
Q Consensus 619 ~~~a~v~~~p~~d~-------~---~~----------------------~---~---------~~~~p~~----~~~~~- 649 (736)
+++++|+.++.... . .. + . ....+.. ...+.
T Consensus 162 ~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T PRK08775 162 RVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAED 241 (343)
T ss_pred hhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHH
Confidence 99999988753210 0 00 0 0 0000000 00000
Q ss_pred ------------------------cc------ccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCC
Q 004690 650 ------------------------VK------AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 699 (736)
Q Consensus 650 ------------------------i~------~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 699 (736)
+. .....|+||++|++|..+|+.++.++++++.. ..++++++ .++
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~--~~a 316 (343)
T PRK08775 242 YLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLR--SPY 316 (343)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEe--CCc
Confidence 00 11345799999999999999988888776632 23455664 138
Q ss_pred CcCCCCChHHHHHHHHHHHHHHHHh
Q 004690 700 GHFSKSGRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 700 gH~~~~~~~~~~~~~a~~~~fl~~~ 724 (736)
||.......+.+... +.+||.+.
T Consensus 317 GH~~~lE~Pe~~~~~--l~~FL~~~ 339 (343)
T PRK08775 317 GHDAFLKETDRIDAI--LTTALRST 339 (343)
T ss_pred cHHHHhcCHHHHHHH--HHHHHHhc
Confidence 998765555555543 56787643
No 119
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.15 E-value=7e-11 Score=120.59 Aligned_cols=201 Identities=15% Similarity=0.195 Sum_probs=119.4
Q ss_pred CeEEeEEEEEecCCccCCCCCcEEEEecCC-CCcCCCCCCchhHHHHHHCC----cEEEEEcccCCCCCChhhhhc----
Q 004690 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGS-YEICNDPAFNSSRLSLLDRG----FIFAIAQIRGGGELGRQWYEN---- 566 (736)
Q Consensus 496 G~~i~~~~~~p~~~~~~~~~~P~vl~~hGg-~~~~~~~~~~~~~~~l~~~G----~~v~~~d~RG~g~~g~~~~~~---- 566 (736)
|..+.++++.|++. ...++.|+|++.||. .... ..........++..| .++++++.-+.+.....|+..
T Consensus 5 g~~~~~~VylP~~y-~~~~~~PvlylldG~~~~~~-~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-DPSKPYPVLYLLDGQSGWFR-NGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp TEEEEEEEEECTTG-GTTTTEEEEEEESHTTHHHH-HHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred CCeEEEEEEECCCC-CCCCCCEEEEEccCCccccc-cchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccc
Confidence 56788899999997 677899999999994 1110 001112233445554 455555554443223344421
Q ss_pred --cccccCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhc-cCCCC
Q 004690 567 --GKFLKKKNTFTDFI--ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM-LDPTI 641 (736)
Q Consensus 567 --~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~-~~~~~ 641 (736)
.....+...+.+++ +.+.++.++..+++++.+|+|+||||+.++.++.++|++|.++++.+|.++....+ .....
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~ 162 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDD 162 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTC
T ss_pred cccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCc
Confidence 11112223455555 46778888777777779999999999999999999999999999999987654211 11000
Q ss_pred CCc--ccccc-c----cccccccEEEeecCCCCCCCCh----------HHHHHHHHHHhcCCCCCeEEEEecCCCCcC
Q 004690 642 PLT--TAEWE-V----KAQNYPHILVTAGLNDPRVMYS----------EPAKFVAKLREMKTDDNILLFKCELGAGHF 702 (736)
Q Consensus 642 p~~--~~~~~-i----~~~~~ppvLi~~G~~D~~Vp~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 702 (736)
... ...+. + ......++++..|..|...... ....+.+.|+..+.+.....+. ++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~----G~H~ 236 (251)
T PF00756_consen 163 EAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFP----GGHD 236 (251)
T ss_dssp GHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEH----SESS
T ss_pred HHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEec----Cccc
Confidence 000 00000 1 1224456899999999854322 2233333444555666555553 6783
No 120
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.15 E-value=1.5e-09 Score=116.31 Aligned_cols=107 Identities=14% Similarity=0.093 Sum_probs=76.2
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
..|.||++||..... ..|...+..|+ .+|.|+++|+||+|.+...... .....+++++...+..++++-. .
T Consensus 126 ~~~~ivllHG~~~~~--~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~----~~~~ys~~~~a~~l~~~i~~l~--~ 196 (383)
T PLN03084 126 NNPPVLLIHGFPSQA--YSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPG----YGFNYTLDEYVSSLESLIDELK--S 196 (383)
T ss_pred CCCeEEEECCCCCCH--HHHHHHHHHHh-cCCEEEEECCCCCCCCCCCccc----ccccCCHHHHHHHHHHHHHHhC--C
Confidence 357899999965433 23666666665 5899999999999876432110 0112355666666555555432 3
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCcc
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~ 630 (736)
+++.++|+|+||.++..++.++|++++++|+.+|..
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 579999999999999999999999999999888753
No 121
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.12 E-value=8.4e-10 Score=115.63 Aligned_cols=192 Identities=20% Similarity=0.264 Sum_probs=120.6
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (736)
...|.||++|| ++. ....|......|... |+.|.++|..|+|-.+. .+.+ ...+..+....+..+......
T Consensus 56 ~~~~pvlllHG-F~~-~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~--~~~~----~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHG-FGA-SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSP--LPRG----PLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEecc-ccC-CcccHhhhccccccccceEEEEEecCCCCcCCC--CCCC----CceehhHHHHHHHHHHHhhcC
Confidence 35678999999 444 344566666666555 79999999999662211 1111 113456666666665554433
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCceeEEE---EcCCccchhhh--------c---c------CC---CCCC------
Q 004690 593 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV---AAVPFVDVLTT--------M---L------DP---TIPL------ 643 (736)
Q Consensus 593 d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v---~~~p~~d~~~~--------~---~------~~---~~p~------ 643 (736)
.++.++|||+||+++..+|+.+|+.++.+| ...+....... + . -+ ..+.
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 459999999999999999999999999998 44443221100 0 0 00 0000
Q ss_pred -------------------------------cccccc----------------ccccccccEEEeecCCCCCCCChHHHH
Q 004690 644 -------------------------------TTAEWE----------------VKAQNYPHILVTAGLNDPRVMYSEPAK 676 (736)
Q Consensus 644 -------------------------------~~~~~~----------------i~~~~~ppvLi~~G~~D~~Vp~~~~~~ 676 (736)
....+- +..+.+-|+||++|..|+.+|.+.+..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~ 285 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE 285 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHH
Confidence 000000 223343569999999999999997777
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHh
Q 004690 677 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 677 ~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~ 724 (736)
+.+++ ..+++..++ ++||.....+.+..... +..|+.++
T Consensus 286 ~~~~~----pn~~~~~I~---~~gH~~h~e~Pe~~~~~--i~~Fi~~~ 324 (326)
T KOG1454|consen 286 LKKKL----PNAELVEIP---GAGHLPHLERPEEVAAL--LRSFIARL 324 (326)
T ss_pred HHhhC----CCceEEEeC---CCCcccccCCHHHHHHH--HHHHHHHh
Confidence 76655 234555554 99998766666655543 67888765
No 122
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.10 E-value=2e-09 Score=135.31 Aligned_cols=137 Identities=14% Similarity=0.029 Sum_probs=85.8
Q ss_pred CCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCCh
Q 004690 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 561 (736)
Q Consensus 482 ~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~ 561 (736)
..+....+.+.. +| +..++.+.... . ....|.||++||..+... .|......|. .+|.|+++|+||+|.+..
T Consensus 1342 ~~l~~~~~~v~~-~~--~~~~i~~~~~G-~-~~~~~~vVllHG~~~s~~--~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~ 1413 (1655)
T PLN02980 1342 EQVRTYELRVDV-DG--FSCLIKVHEVG-Q-NAEGSVVLFLHGFLGTGE--DWIPIMKAIS-GSARCISIDLPGHGGSKI 1413 (1655)
T ss_pred CCCceEEEEEcc-Cc--eEEEEEEEecC-C-CCCCCeEEEECCCCCCHH--HHHHHHHHHh-CCCEEEEEcCCCCCCCCC
Confidence 344444444442 33 45554443322 1 123578999999665543 3666665664 469999999999987643
Q ss_pred hhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 562 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
.-...........+++++.+.+..++++. ..+++.++||||||.+++.++.++|++++++|+.++
T Consensus 1414 ~~~~~~~~~~~~~si~~~a~~l~~ll~~l--~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1414 QNHAKETQTEPTLSVELVADLLYKLIEHI--TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred ccccccccccccCCHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 11000000111234566666555555442 347899999999999999999999999999887764
No 123
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.09 E-value=1.4e-08 Score=108.85 Aligned_cols=201 Identities=15% Similarity=0.105 Sum_probs=136.3
Q ss_pred eeEEECCCCCEEEEEEeCC-----------------------------CC--cEEEEEEEECCCCCeecccc-------c
Q 004690 194 GCFQVSPDNKLVAYAEDTK-----------------------------GD--EIYTVYVIDIETGTPVGKPL-------V 235 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~-----------------------------G~--e~~~l~v~dl~tg~~~~~~~-------~ 235 (736)
..+.|||||++|||..-.. |+ ....|+|+|+++++...... +
T Consensus 104 ~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~ 183 (353)
T PF00930_consen 104 SAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQD 183 (353)
T ss_dssp BSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSS
T ss_pred cceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCc
Confidence 4679999999999985211 22 24688999999998643221 1
Q ss_pred CccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceE---EEEEEc-CCccEEEEEecCcceeE
Q 004690 236 GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYS---LGLQAS-ESKKFLFIASESKITRF 310 (736)
Q Consensus 236 ~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~---~~~~~S-~Dg~~l~~~~~~~~~~~ 310 (736)
.....+.|++|+ +|++...++......+...+..++ ...++.++..+.+. ..+.+. +++..+++.+...+-.+
T Consensus 184 ~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg--~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~h 261 (353)
T PF00930_consen 184 YYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTG--ETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRH 261 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTT--TCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEE
T ss_pred cCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCC--ceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcE
Confidence 224568999999 599988877666667788888776 34555565544432 134444 78777777777777899
Q ss_pred EEEEeCCCCCceEEeecccccee--EEEeeeCCEEEEEEcCCCCCCcEEEEEeCC-CCCceeeEecCCCCceeeeEEEeC
Q 004690 311 VFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACPVD-NTSETTVLIPHRESVKLQDIQLFI 387 (736)
Q Consensus 311 l~~~dl~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~ 387 (736)
||+++.+++. .+.|+.+.-.+. ..++++++.|||.++.+.....+||+++++ + +..+.|........-..|++++
T Consensus 262 ly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~-~~~~~LT~~~~~~~~~~~Spdg 339 (353)
T PF00930_consen 262 LYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG-GEPKCLTCEDGDHYSASFSPDG 339 (353)
T ss_dssp EEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET-TEEEESSTTSSTTEEEEE-TTS
T ss_pred EEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC-CCeEeccCCCCCceEEEECCCC
Confidence 9999999987 888998776663 458899999999999864457899999998 4 3444455444333234566666
Q ss_pred CEEEEEEEeCC
Q 004690 388 DHLAVYEREGG 398 (736)
Q Consensus 388 ~~l~~~~~~~g 398 (736)
+++++.++..+
T Consensus 340 ~y~v~~~s~~~ 350 (353)
T PF00930_consen 340 KYYVDTYSGPD 350 (353)
T ss_dssp SEEEEEEESSS
T ss_pred CEEEEEEcCCC
Confidence 77777776544
No 124
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.09 E-value=2e-09 Score=106.31 Aligned_cols=179 Identities=16% Similarity=0.182 Sum_probs=114.0
Q ss_pred EeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHH
Q 004690 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD 578 (736)
Q Consensus 499 i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D 578 (736)
.+..+++|... +.+|+||+.|| +... ...|......+++.||+|+.+|+..-.. .......++
T Consensus 4 ~~l~v~~P~~~----g~yPVv~f~~G-~~~~-~s~Ys~ll~hvAShGyIVV~~d~~~~~~-----------~~~~~~~~~ 66 (259)
T PF12740_consen 4 KPLLVYYPSSA----GTYPVVLFLHG-FLLI-NSWYSQLLEHVASHGYIVVAPDLYSIGG-----------PDDTDEVAS 66 (259)
T ss_pred CCeEEEecCCC----CCcCEEEEeCC-cCCC-HHHHHHHHHHHHhCceEEEEecccccCC-----------CCcchhHHH
Confidence 35567888765 78999999999 4433 2337788889999999999999654221 112234578
Q ss_pred HHHHHHHHHHcC--------CCCCCcEEEEEeChHHHHHHHHHHhC-----CCceeEEEEcCCccchhhhccCCCCCCcc
Q 004690 579 FIACAEYLIKNC--------YCTKEKLCIEGRSAGGLLIGAVLNMR-----PDLFKAAVAAVPFVDVLTTMLDPTIPLTT 645 (736)
Q Consensus 579 ~~~~~~~l~~~~--------~~d~~ri~~~G~S~GG~la~~~~~~~-----p~~~~a~v~~~p~~d~~~~~~~~~~p~~~ 645 (736)
+.+.++||.+.- ..|-+||+|+|||.||-++..++..+ +..|+|+|+..|+-.+.... ...|..
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~--~~~P~v- 143 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGS--QTEPPV- 143 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccccccccc--CCCCcc-
Confidence 888999987621 14678999999999999999888886 55899999999976432211 111110
Q ss_pred ccccccc-cccccEEEeecCCCC--------CCCCh--HHHHHHHHHHhcCCCCCeEEEEecCCCCcCC
Q 004690 646 AEWEVKA-QNYPHILVTAGLNDP--------RVMYS--EPAKFVAKLREMKTDDNILLFKCELGAGHFS 703 (736)
Q Consensus 646 ~~~~i~~-~~~ppvLi~~G~~D~--------~Vp~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 703 (736)
..|.-.. ....|+||+-..-+. .+-|. +-.+|+++++. +.-.+.. .++||.-
T Consensus 144 ~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~---p~~~~v~---~~~GH~d 206 (259)
T PF12740_consen 144 LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKP---PSWHFVA---KDYGHMD 206 (259)
T ss_pred ccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCC---CEEEEEe---CCCCchH
Confidence 1110011 122457777555553 23333 34677777643 2223333 3899953
No 125
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.97 E-value=5.2e-09 Score=111.79 Aligned_cols=194 Identities=18% Similarity=0.194 Sum_probs=95.3
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC------Chh---hh-------h-----cccc-cc
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL------GRQ---WY-------E-----NGKF-LK 571 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~------g~~---~~-------~-----~~~~-~~ 571 (736)
++.|+||+.||..+... .|+..+..||.+||+|++++.|-+... ... .. + .... ..
T Consensus 98 ~~~PvvIFSHGlgg~R~--~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT--SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT--TT--TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcchh--hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 67999999999666544 488888999999999999999954221 110 00 0 0000 00
Q ss_pred C---------cChHHHHHHHHHHHHH--c------------------CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004690 572 K---------KNTFTDFIACAEYLIK--N------------------CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKA 622 (736)
Q Consensus 572 ~---------~~~~~D~~~~~~~l~~--~------------------~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a 622 (736)
. ..-..|+..+++.|.+ . +-+|.++|+++|||+||..++.++.+. ..|++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~ 254 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKA 254 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--E
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcce
Confidence 0 0123566667776653 1 235678999999999999999988875 57899
Q ss_pred EEEcCCccchhhhccCCCCCCccccccccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcC
Q 004690 623 AVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 702 (736)
Q Consensus 623 ~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 702 (736)
+|+.-|..-.+.. .. ... ...|+|+++++. - ..+.......++...+....++.+ .|..|.
T Consensus 255 ~I~LD~W~~Pl~~----------~~--~~~-i~~P~L~InSe~-f--~~~~~~~~~~~~~~~~~~~~~~ti---~gt~H~ 315 (379)
T PF03403_consen 255 GILLDPWMFPLGD----------EI--YSK-IPQPLLFINSES-F--QWWENIFRMKKVISNNKESRMLTI---KGTAHL 315 (379)
T ss_dssp EEEES---TTS-G----------GG--GGG---S-EEEEEETT-T----HHHHHHHHTT--TTS-EEEEEE---TT--GG
T ss_pred EEEeCCcccCCCc----------cc--ccC-CCCCEEEEECcc-c--CChhhHHHHHHHhccCCCcEEEEE---CCCcCC
Confidence 9988775422110 00 111 234599998775 2 223222222222223333333333 489995
Q ss_pred CCC------Ch-------------H-HHHHH-HHHHHHHHHHhcCCCC
Q 004690 703 SKS------GR-------------F-ERLRE-AAFTYTFLMRALSMLP 729 (736)
Q Consensus 703 ~~~------~~-------------~-~~~~~-~a~~~~fl~~~l~~~~ 729 (736)
... +. . ...+. ....++||.++|++..
T Consensus 316 s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~~~ 363 (379)
T PF03403_consen 316 SFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGLHK 363 (379)
T ss_dssp GGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT--S
T ss_pred CcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 411 11 1 11111 2346899999998654
No 126
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.92 E-value=3.2e-09 Score=119.57 Aligned_cols=129 Identities=18% Similarity=0.112 Sum_probs=89.7
Q ss_pred EEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHC-C-cEEEEEccc-CCCCCChhhhhccccccCcC
Q 004690 498 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-G-FIFAIAQIR-GGGELGRQWYENGKFLKKKN 574 (736)
Q Consensus 498 ~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G-~~v~~~d~R-G~g~~g~~~~~~~~~~~~~~ 574 (736)
-+.+.++.|... ...++.|+||++|||.......... ....|+.. + ++|+.+||| |.-++...... ...+..
T Consensus 78 cl~l~i~~p~~~-~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~ 152 (493)
T cd00312 78 CLYLNVYTPKNT-KPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNY 152 (493)
T ss_pred CCeEEEEeCCCC-CCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcch
Confidence 355666777654 3356789999999985544333222 23455554 3 999999999 55444322111 122334
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEcCCccc
Q 004690 575 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVD 631 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~---~~~d~~ri~~~G~S~GG~la~~~~~~--~p~~~~a~v~~~p~~d 631 (736)
.+.|.+++++|+.++ -..||++|.|+|+|+||+++..++.. .+.+|+++|+.+|...
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 579999999999875 23699999999999999999888876 3458999998887544
No 127
>PRK05855 short chain dehydrogenase; Validated
Probab=98.91 E-value=1.1e-08 Score=118.19 Aligned_cols=106 Identities=13% Similarity=0.132 Sum_probs=66.2
Q ss_pred CCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccC
Q 004690 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 572 (736)
Q Consensus 493 s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~ 572 (736)
..||.++.+..+ + +...|.||++||..+... .|......| ..||.|+++|+||+|.+..... ..
T Consensus 9 ~~~g~~l~~~~~---g----~~~~~~ivllHG~~~~~~--~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~------~~ 72 (582)
T PRK05855 9 SSDGVRLAVYEW---G----DPDRPTVVLVHGYPDNHE--VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKR------TA 72 (582)
T ss_pred eeCCEEEEEEEc---C----CCCCCeEEEEcCCCchHH--HHHHHHHHh-hcceEEEEecCCCCCCCCCCCc------cc
Confidence 457877765432 1 123578999999654432 366666666 6799999999999987653211 11
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004690 573 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (736)
Q Consensus 573 ~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~ 615 (736)
..+++++.+.+..+++.-.. ..++.++||||||.+++.++.+
T Consensus 73 ~~~~~~~a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 73 AYTLARLADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ccCHHHHHHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 12344444444444332111 2349999999999888777665
No 128
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.90 E-value=2.4e-08 Score=107.40 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=71.9
Q ss_pred CCcEEEEecCCCCcCCC----------CCCchhH----HHHHHCCcEEEEEcccCCCC--------CChhhhhc--cc--
Q 004690 515 SDPLLLYGYGSYEICND----------PAFNSSR----LSLLDRGFIFAIAQIRGGGE--------LGRQWYEN--GK-- 568 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~----------~~~~~~~----~~l~~~G~~v~~~d~RG~g~--------~g~~~~~~--~~-- 568 (736)
+.++||+.|+-.+.+-. +.|-... ..|=-.-|-|+++|+-|++. .|..-... +.
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 45899999985553210 1221111 12222358999999998753 22111111 11
Q ss_pred -cccCcChHHHHHHHHHHHHHcCCCCCCcEE-EEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 569 -FLKKKNTFTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 569 -~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~-~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
......+++|+.+++..+++.-.+ +++. ++|+||||.+++.++.++|++++.+|+.+.
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 012236789988888887765333 5675 999999999999999999999998887753
No 129
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.88 E-value=4.5e-08 Score=91.92 Aligned_cols=187 Identities=19% Similarity=0.206 Sum_probs=116.9
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEccc------CCCCCChhhhhccccccC-cChHHHH---HHHHHHH
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIR------GGGELGRQWYENGKFLKK-KNTFTDF---IACAEYL 586 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~R------G~g~~g~~~~~~~~~~~~-~~~~~D~---~~~~~~l 586 (736)
-+||++||-..+.. .+......+.-+....++|.-+ -.|..+..|.+....... ...-+.+ .+.+..|
T Consensus 4 atIi~LHglGDsg~--~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGS--GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCCc--cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 57999999443332 2333333333345556665332 123344557654432111 1122222 2333333
Q ss_pred HHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCccccccccccccccEEEeec
Q 004690 587 IKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAG 663 (736)
Q Consensus 587 ~~~---~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G 663 (736)
+++ ..++++||++-|+|+||.+++.++..+|....+++...++..-..... +..+ ....++|++..||
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~-~~~~--------~~~~~~~i~~~Hg 152 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGL-PGWL--------PGVNYTPILLCHG 152 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhc-cCCc--------cccCcchhheecc
Confidence 332 235789999999999999999999988876777777777655222111 1111 0113788999999
Q ss_pred CCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHH
Q 004690 664 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 723 (736)
Q Consensus 664 ~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~ 723 (736)
+.|+.||..-..+....|+..+.. +.++.+++-+|.... ++..+...|+..
T Consensus 153 ~~d~~vp~~~g~~s~~~l~~~~~~---~~f~~y~g~~h~~~~------~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 153 TADPLVPFRFGEKSAQFLKSLGVR---VTFKPYPGLGHSTSP------QELDDLKSWIKT 203 (206)
T ss_pred cCCceeehHHHHHHHHHHHHcCCc---eeeeecCCccccccH------HHHHHHHHHHHH
Confidence 999999999999999999998866 567777899996532 244456678776
No 130
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.87 E-value=3.1e-08 Score=109.52 Aligned_cols=108 Identities=16% Similarity=0.048 Sum_probs=72.3
Q ss_pred cEEEEecCCCCcCCCC---CCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCC
Q 004690 517 PLLLYGYGSYEICNDP---AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~---~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (736)
+-||++||......-. .-......|+++||.|+++|.||.|.....+. ......+++.++++++.+. +.
T Consensus 189 ~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~------~ddY~~~~i~~al~~v~~~--~g 260 (532)
T TIGR01838 189 TPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT------FDDYIRDGVIAALEVVEAI--TG 260 (532)
T ss_pred CcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC------hhhhHHHHHHHHHHHHHHh--cC
Confidence 3467788853322111 11356778999999999999999886544321 1122335688889888864 34
Q ss_pred CCcEEEEEeChHHHHHHH----HHHhC-CCceeEEEEcCCccch
Q 004690 594 KEKLCIEGRSAGGLLIGA----VLNMR-PDLFKAAVAAVPFVDV 632 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~----~~~~~-p~~~~a~v~~~p~~d~ 632 (736)
.+++.++|+|+||.+++. ++..+ |++++++++.+..+|+
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 578999999999998522 34444 7788888877766663
No 131
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.84 E-value=7.2e-08 Score=92.07 Aligned_cols=165 Identities=21% Similarity=0.192 Sum_probs=98.3
Q ss_pred EEEEecCCCCcCC-CCCCchhHHHHHHCCc--EEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 518 LLLYGYGSYEICN-DPAFNSSRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 518 ~vl~~hGg~~~~~-~~~~~~~~~~l~~~G~--~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
.|||+|| +.++. ........+.+.+.|. .+..+|++- ..++.++.++.++++.. +
T Consensus 1 ~ilYlHG-F~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-------------------~p~~a~~~l~~~i~~~~--~ 58 (187)
T PF05728_consen 1 MILYLHG-FNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-------------------FPEEAIAQLEQLIEELK--P 58 (187)
T ss_pred CeEEecC-CCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-------------------CHHHHHHHHHHHHHhCC--C
Confidence 3899999 44432 2222233346666654 455555431 12466666777766542 3
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhcc----CCCCCCcccccc-------------cccc-ccc
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML----DPTIPLTTAEWE-------------VKAQ-NYP 656 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~----~~~~p~~~~~~~-------------i~~~-~~p 656 (736)
+.++++|.|+||+.|..++.+++ +++ |+.+|.+.....+. ....+.+...|. +... ..-
T Consensus 59 ~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~ 135 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPE 135 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCc
Confidence 45999999999999999998875 344 88888877654332 222222222222 1112 223
Q ss_pred cEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHH
Q 004690 657 HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 721 (736)
Q Consensus 657 pvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl 721 (736)
+++++++..|.++++.++.+.+... ..++. +|++|.+.. -.+ ....+.+|+
T Consensus 136 ~~lvll~~~DEvLd~~~a~~~~~~~-------~~~i~---~ggdH~f~~-f~~---~l~~i~~f~ 186 (187)
T PF05728_consen 136 RYLVLLQTGDEVLDYREAVAKYRGC-------AQIIE---EGGDHSFQD-FEE---YLPQIIAFL 186 (187)
T ss_pred cEEEEEecCCcccCHHHHHHHhcCc-------eEEEE---eCCCCCCcc-HHH---HHHHHHHhh
Confidence 7999999999999997765555321 12233 488998753 222 233466775
No 132
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.84 E-value=2.4e-09 Score=107.12 Aligned_cols=78 Identities=26% Similarity=0.232 Sum_probs=63.6
Q ss_pred cEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEE
Q 004690 546 FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 625 (736)
Q Consensus 546 ~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~ 625 (736)
|.|+++|.||.|.+...|. ........+|+.+.++.+++.-.. +++.++|+||||.+++.++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWD----PDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCG----SGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCcc----CCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 6799999999997653211 233345678999999999886443 4599999999999999999999999999999
Q ss_pred cCCc
Q 004690 626 AVPF 629 (736)
Q Consensus 626 ~~p~ 629 (736)
.+++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9985
No 133
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.81 E-value=1.5e-08 Score=93.89 Aligned_cols=200 Identities=18% Similarity=0.246 Sum_probs=116.1
Q ss_pred eEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCch--hHHHH-HHCCcEEEEEcc--cCCCCCC--hhhhh---c
Q 004690 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS--SRLSL-LDRGFIFAIAQI--RGGGELG--RQWYE---N 566 (736)
Q Consensus 497 ~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~--~~~~l-~~~G~~v~~~d~--RG~g~~g--~~~~~---~ 566 (736)
..+..-++.|++. ..+++.|+|.++-|-.-.. ..|.. -++.. ...|.+|+.||- ||..-.| ..|.- +
T Consensus 26 c~Mtf~vylPp~a-~~~k~~P~lf~LSGLTCT~--~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 26 CSMTFGVYLPPDA-PRGKRCPVLFYLSGLTCTH--ENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred cceEEEEecCCCc-ccCCcCceEEEecCCcccc--hhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCc
Confidence 4555667888877 6667799999999843322 22322 23433 456999999984 6642111 12221 1
Q ss_pred ccccc-CcChHHH----HHHHHHHH---HH--cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhc
Q 004690 567 GKFLK-KKNTFTD----FIACAEYL---IK--NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 636 (736)
Q Consensus 567 ~~~~~-~~~~~~D----~~~~~~~l---~~--~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~ 636 (736)
|...+ ....+.. ..-+++.| +. .-.+|+.+++|.||||||+-|+..+.++|.+++.+.+.+|+.+.....
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp 182 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP 182 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc
Confidence 11111 1111111 11122222 22 234789999999999999999999999999999999999998865311
Q ss_pred c-----CCCCCCcccccc-------cccc--ccccEEEeecCCCCCCCChH--HHHHHHHHHhcCCCCCeEEEEecCCCC
Q 004690 637 L-----DPTIPLTTAEWE-------VKAQ--NYPHILVTAGLNDPRVMYSE--PAKFVAKLREMKTDDNILLFKCELGAG 700 (736)
Q Consensus 637 ~-----~~~~p~~~~~~~-------i~~~--~~ppvLi~~G~~D~~Vp~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~g 700 (736)
- ..-+......|+ |++. ..--+||-.|.+|...+ .| ...+.++..+. ...+++++..+|-.
T Consensus 183 WGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~-~qLlPe~l~~a~~~~--~~~~v~~r~~~gyD 259 (283)
T KOG3101|consen 183 WGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLA-EQLLPENLLEACKAT--WQAPVVFRLQEGYD 259 (283)
T ss_pred chHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhh-hhcChHHHHHHhhcc--ccccEEEEeecCCC
Confidence 0 000011112233 3332 22349999999999776 22 34455555433 22356777667788
Q ss_pred cC
Q 004690 701 HF 702 (736)
Q Consensus 701 H~ 702 (736)
|.
T Consensus 260 HS 261 (283)
T KOG3101|consen 260 HS 261 (283)
T ss_pred cc
Confidence 84
No 134
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.79 E-value=1.3e-08 Score=107.44 Aligned_cols=126 Identities=21% Similarity=0.265 Sum_probs=86.3
Q ss_pred EeEEEEEecCCccCCCCCcEEEEecCCC---CcCCCCCCchhHHHHHHCC-cEEEEEcccCCCCCCh-hhhhcc--cccc
Q 004690 499 IPICIVYRKNLVKLDGSDPLLLYGYGSY---EICNDPAFNSSRLSLLDRG-FIFAIAQIRGGGELGR-QWYENG--KFLK 571 (736)
Q Consensus 499 i~~~~~~p~~~~~~~~~~P~vl~~hGg~---~~~~~~~~~~~~~~l~~~G-~~v~~~d~RG~g~~g~-~~~~~~--~~~~ 571 (736)
+...|+.|. . ...+.|++||+|||. |+...+.|. -..|+.+| ++|+.+|||-+- +|- .+.... ....
T Consensus 80 L~LNIwaP~-~--~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~-lGfL~~~~~~~~~~~~ 153 (491)
T COG2272 80 LYLNIWAPE-V--PAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGA-LGFLDLSSLDTEDAFA 153 (491)
T ss_pred eeEEeeccC-C--CCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCccccc-ceeeehhhcccccccc
Confidence 455566776 2 235689999999973 233333343 45788998 999999999642 221 111111 1111
Q ss_pred CcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC---ceeEEEEcCCccc
Q 004690 572 KKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVD 631 (736)
Q Consensus 572 ~~~~~~D~~~~~~~l~~~---~~~d~~ri~~~G~S~GG~la~~~~~~~p~---~~~a~v~~~p~~d 631 (736)
....+.|.+.+++|+.++ -.-||++|.|+|.|+||+.++.+++. |. +|+-+|+.+|..-
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 225689999999999875 33599999999999999988887775 54 6877788777553
No 135
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.76 E-value=7.8e-06 Score=85.06 Aligned_cols=205 Identities=14% Similarity=0.054 Sum_probs=108.2
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc-cCc-cceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~-~~~-~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
....|++||++|.|..+..| ..+||.+||++++.++++- ++. ..+..++|++ .++|+... ..|+..+|.|
T Consensus 39 ~~~~ft~dG~kllF~s~~dg--~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-----~~l~~vdL~T 111 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDG--NRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-----RSLRRVDLDT 111 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTS--S-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT-----TEEEEEETTT
T ss_pred cCCCcCCCCCEEEEEeccCC--CcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC-----CeEEEEECCc
Confidence 35588999999999999887 5889999999999998753 222 2247889999 88897643 3699999999
Q ss_pred CCCCcEEEEeecCCceEEEEEE--cCCccEEEEEecCc-------------------ceeEEEEEeCCCCCceEEeeccc
Q 004690 271 DQSNDICLYHEKDDIYSLGLQA--SESKKFLFIASESK-------------------ITRFVFYLDVSKPEELRVLTPRV 329 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~--S~Dg~~l~~~~~~~-------------------~~~~l~~~dl~~~~~~~~l~~~~ 329 (736)
. +..+||+.++. +.....| ..|++.++...... -.+.|+.+|+.+|+ .+.+....
T Consensus 112 ~--e~~~vy~~p~~-~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~-~~~v~~~~ 187 (386)
T PF14583_consen 112 L--EERVVYEVPDD-WKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE-RKVVFEDT 187 (386)
T ss_dssp ----EEEEEE--TT-EEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT---EEEEEEES
T ss_pred C--cEEEEEECCcc-cccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc-eeEEEecC
Confidence 7 56678876643 4333344 56787775543211 13579999999998 77776544
Q ss_pred ccee-EEEeeeCCEEEEEEcCC-C-CCCcEEEEEeCCCCCceeeEecCCCCcee--eeEEEeCCEEEEEEEeCCeeEEEE
Q 004690 330 VGVD-TAASHRGNHFFITRRSD-E-LFNSELLACPVDNTSETTVLIPHRESVKL--QDIQLFIDHLAVYEREGGLQKITT 404 (736)
Q Consensus 330 ~~~~-~~~s~dg~~l~~~t~~~-~-~~~~~l~~~~~~~~~~~~~l~~~~~~~~i--~~~~~~~~~l~~~~~~~g~~~l~v 404 (736)
.-.. ..++|....++.-..++ + ....+++.++.++. ....+....+.... +.+..++..+++.....+...-++
T Consensus 188 ~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~-~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i 266 (386)
T PF14583_consen 188 DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGS-NVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWI 266 (386)
T ss_dssp S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEE
T ss_pred ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCC-cceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEE
Confidence 4322 23666544454444432 2 22358999998773 22223333332222 334455566655444344444455
Q ss_pred EEcCCC
Q 004690 405 YRLPAV 410 (736)
Q Consensus 405 ~~l~~~ 410 (736)
+.++..
T Consensus 267 ~~~d~~ 272 (386)
T PF14583_consen 267 AGYDPD 272 (386)
T ss_dssp EEE-TT
T ss_pred EeeCCC
Confidence 555543
No 136
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.75 E-value=6.8e-08 Score=91.20 Aligned_cols=202 Identities=20% Similarity=0.200 Sum_probs=121.0
Q ss_pred EEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccc
Q 004690 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 568 (736)
Q Consensus 489 ~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~ 568 (736)
+.++..||..+++. .+|.+. +.+-.|.+-|+++.... .|...+...+.+||.|+..||||.|++...-.....
T Consensus 8 ~~l~~~DG~~l~~~-~~pA~~-----~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQ-RFPADG-----KASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccc-cccCCC-----CCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 56788899999887 455443 34545666676765443 366677778889999999999999875432111011
Q ss_pred cccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE-EEEcCC-----ccch----------
Q 004690 569 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKA-AVAAVP-----FVDV---------- 632 (736)
Q Consensus 569 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a-~v~~~p-----~~d~---------- 632 (736)
.....-...|+.++++++.+.-. ......+|||+||.+.+.+... | ++++ +|..++ ....
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL~~~~-~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~ 156 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGLLGQH-P-KYAAFAVFGSGAGWSGWMGLRERLGAVLLW 156 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhCC--CCceEEeeccccceeecccccC-c-ccceeeEeccccccccchhhhhcccceeec
Confidence 11223355799999999988432 2468999999999877665553 5 3322 222221 1110
Q ss_pred ----------hhhc----c--CCCCCCcc-cccc-----------------cc---ccccccEEEeecCCCCCCCChHHH
Q 004690 633 ----------LTTM----L--DPTIPLTT-AEWE-----------------VK---AQNYPHILVTAGLNDPRVMYSEPA 675 (736)
Q Consensus 633 ----------~~~~----~--~~~~p~~~-~~~~-----------------i~---~~~~ppvLi~~G~~D~~Vp~~~~~ 675 (736)
...| . ...+|.+. .+|. +. +....|++.+...+|+-+|+....
T Consensus 157 ~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d 236 (281)
T COG4757 157 NLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRD 236 (281)
T ss_pred cccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHH
Confidence 0000 0 01222211 1121 11 113467999999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEecC-CCCcCC
Q 004690 676 KFVAKLREMKTDDNILLFKCEL-GAGHFS 703 (736)
Q Consensus 676 ~~~~~l~~~~~~~~~~~~~~~~-~~gH~~ 703 (736)
+|+...+++. .+.+.++..+ .-||..
T Consensus 237 ~f~~~y~nAp--l~~~~~~~~~~~lGH~g 263 (281)
T COG4757 237 AFASFYRNAP--LEMRDLPRAEGPLGHMG 263 (281)
T ss_pred HHHHhhhcCc--ccceecCcccCcccchh
Confidence 9988777654 3344444221 158865
No 137
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.74 E-value=2.2e-07 Score=87.76 Aligned_cols=158 Identities=18% Similarity=0.209 Sum_probs=88.8
Q ss_pred EEEecCCCCcCCCCCCchhHH-HHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcE
Q 004690 519 LLYGYGSYEICNDPAFNSSRL-SLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 597 (736)
Q Consensus 519 vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 597 (736)
|+++|| ++++....|.+... .|... +.|-.++. . . -++..-++.|.+.-....+.+
T Consensus 1 v~IvhG-~~~s~~~HW~~wl~~~l~~~-~~V~~~~~----------~--------~---P~~~~W~~~l~~~i~~~~~~~ 57 (171)
T PF06821_consen 1 VLIVHG-YGGSPPDHWQPWLERQLENS-VRVEQPDW----------D--------N---PDLDEWVQALDQAIDAIDEPT 57 (171)
T ss_dssp EEEE---TTSSTTTSTHHHHHHHHTTS-EEEEEC------------T--------S-----HHHHHHHHHHCCHC-TTTE
T ss_pred CEEeCC-CCCCCccHHHHHHHHhCCCC-eEEecccc----------C--------C---CCHHHHHHHHHHHHhhcCCCe
Confidence 567888 55554556666554 44444 66666554 1 1 133334444443311123469
Q ss_pred EEEEeChHHHHHHHHH-HhCCCceeEEEEcCCccchhhhccCCCCCCccccccccccccccEEEeecCCCCCCCChHHHH
Q 004690 598 CIEGRSAGGLLIGAVL-NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAGLNDPRVMYSEPAK 676 (736)
Q Consensus 598 ~~~G~S~GG~la~~~~-~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~ 676 (736)
.++|||.|+.+++.++ .+....++++++.+|+..-......+... ............| .+++.+++|+.||+..+.+
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~-~f~~~p~~~l~~~-~~viaS~nDp~vp~~~a~~ 135 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELD-GFTPLPRDPLPFP-SIVIASDNDPYVPFERAQR 135 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGC-CCTTSHCCHHHCC-EEEEEETTBSSS-HHHHHH
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhcc-ccccCcccccCCC-eEEEEcCCCCccCHHHHHH
Confidence 9999999999999999 77778899999999985421111111000 0000001112334 5889999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCcCCCCChHH
Q 004690 677 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFE 709 (736)
Q Consensus 677 ~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 709 (736)
++++|.+ +++.+ +++||+.......
T Consensus 136 ~A~~l~a-----~~~~~---~~~GHf~~~~G~~ 160 (171)
T PF06821_consen 136 LAQRLGA-----ELIIL---GGGGHFNAASGFG 160 (171)
T ss_dssp HHHHHT------EEEEE---TS-TTSSGGGTHS
T ss_pred HHHHcCC-----CeEEC---CCCCCcccccCCC
Confidence 9999853 34555 4999987554433
No 138
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.72 E-value=1e-06 Score=86.82 Aligned_cols=129 Identities=20% Similarity=0.107 Sum_probs=88.9
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhc
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
..+.+.+.+|..+..--.|-+.. ..+.+..+||-+||.+|+..+ |......|.+.|+.++.+||+|.|-.......
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~-~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~- 82 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSL-PSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ- 82 (297)
T ss_pred EEEEcccccCceEEEEEEEEecC-CCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCccc-
Confidence 44556666776665555555544 334456799999999998776 66677889999999999999998754332111
Q ss_pred cccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 567 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
..+-.+-..-++.|.++-.++ +++.++|||.|+-.|+.++..+| ..++++.+|
T Consensus 83 ------~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~ 135 (297)
T PF06342_consen 83 ------QYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINP 135 (297)
T ss_pred ------ccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecC
Confidence 111134444455555543344 79999999999999999999987 346666655
No 139
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.70 E-value=3.5e-07 Score=90.09 Aligned_cols=169 Identities=18% Similarity=0.236 Sum_probs=98.3
Q ss_pred CCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCC--------------CChhhhhcccccc--C---
Q 004690 512 LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE--------------LGRQWYENGKFLK--K--- 572 (736)
Q Consensus 512 ~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~--------------~g~~~~~~~~~~~--~--- 572 (736)
+++++|+||+.||-.+.. .-|+.....||.+||+|+++..|-..- +-..|........ +
T Consensus 114 k~~k~PvvvFSHGLggsR--t~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGLGGSR--TLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCCccEEEEecccccch--hhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 367899999999955543 347888889999999999999985421 1223322110000 0
Q ss_pred -cC-----hHHHHHHHHHHHHH---------------------cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEE
Q 004690 573 -KN-----TFTDFIACAEYLIK---------------------NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 625 (736)
Q Consensus 573 -~~-----~~~D~~~~~~~l~~---------------------~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~ 625 (736)
+| -.+++..|+.-|.+ ++.+|..+++++|||.||..+++....+ ..|+++|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeee
Confidence 11 12344444444332 2345678999999999999888887764 46899887
Q ss_pred cCCccchhhhccCCCCCCccccccccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcC
Q 004690 626 AVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 702 (736)
Q Consensus 626 ~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 702 (736)
.-++.=.+... . .+...+| +|++.- .|- -+.++.....++...+.....+.+. |+=|.
T Consensus 271 lD~WM~Pl~~~----------~--~~~arqP-~~finv-~~f--Q~~en~~vmKki~~~n~g~~~it~~---GsVHq 328 (399)
T KOG3847|consen 271 LDAWMFPLDQL----------Q--YSQARQP-TLFINV-EDF--QWNENLLVMKKIESQNEGNHVITLD---GSVHQ 328 (399)
T ss_pred eeeeecccchh----------h--hhhccCC-eEEEEc-ccc--cchhHHHHHHhhhCCCccceEEEEc---cceec
Confidence 66543221111 1 1122344 777762 222 2334445555555555555455554 77674
No 140
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.70 E-value=6.1e-08 Score=94.02 Aligned_cols=116 Identities=19% Similarity=0.163 Sum_probs=79.7
Q ss_pred EEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhh
Q 004690 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWY 564 (736)
Q Consensus 486 ~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~ 564 (736)
.+.+.++..++ ++..++..|.. ...|++++.|||..+.. .|...+..+..+ -..++++|.||+|+.--.-.
T Consensus 50 kedv~i~~~~~-t~n~Y~t~~~~-----t~gpil~l~HG~G~S~L--SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e 121 (343)
T KOG2564|consen 50 KEDVSIDGSDL-TFNVYLTLPSA-----TEGPILLLLHGGGSSAL--SFAIFASELKSKIRCRCLALDLRGHGETKVENE 121 (343)
T ss_pred ccccccCCCcc-eEEEEEecCCC-----CCccEEEEeecCcccch--hHHHHHHHHHhhcceeEEEeeccccCccccCCh
Confidence 35566666555 46665555532 35699999999655444 377777777664 67789999999998543211
Q ss_pred hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004690 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (736)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~ 615 (736)
+ .........|+.+.++++-.. .+.+|+++||||||.++...+..
T Consensus 122 ~---dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 122 D---DLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred h---hcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 1 122334567888888888654 45689999999999999877765
No 141
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.69 E-value=1e-07 Score=97.64 Aligned_cols=130 Identities=15% Similarity=0.049 Sum_probs=89.1
Q ss_pred EEEEEEeCCC-CeEEeEEEEEecCCcc--CCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChh
Q 004690 486 TERKWASASD-GTQIPICIVYRKNLVK--LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (736)
Q Consensus 486 ~~~~~~~s~d-G~~i~~~~~~p~~~~~--~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 562 (736)
...+++.... +.+++..+.+|..... ...+.|+|++.||.... ...|...++.|++.||+|+.++..|+..-+..
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~--~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~ 115 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY--VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAP 115 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCC--ccchhhhHHHHhhCceEEEeccCCCcccccCC
Confidence 4455555433 5578888888776510 11478999999994333 44578888999999999999999996543333
Q ss_pred hhhccccc----cCcChHHHHHHHHHHHHHc---C----CCCCCcEEEEEeChHHHHHHHHHHhCC
Q 004690 563 WYENGKFL----KKKNTFTDFIACAEYLIKN---C----YCTKEKLCIEGRSAGGLLIGAVLNMRP 617 (736)
Q Consensus 563 ~~~~~~~~----~~~~~~~D~~~~~~~l~~~---~----~~d~~ri~~~G~S~GG~la~~~~~~~p 617 (736)
-..++... .......|+...+++|.+. + .+|+.+|+++|||+||+.++.++.-+.
T Consensus 116 ~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 116 AAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred hhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 23222111 1123347888888888776 3 478899999999999999988775433
No 142
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.69 E-value=1.2e-06 Score=85.13 Aligned_cols=144 Identities=16% Similarity=0.171 Sum_probs=90.1
Q ss_pred eEEECCCCCEEEEEEeC----CCC---cEEEEEEEECCCCCeeccccc--CccceeEEeeCC-eEEEEEeCCCCCCceEE
Q 004690 195 CFQVSPDNKLVAYAEDT----KGD---EIYTVYVIDIETGTPVGKPLV--GVTASVEWAGNE-ALVYITMDEILRPDKAW 264 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~----~G~---e~~~l~v~dl~tg~~~~~~~~--~~~~~~~WspDg-~l~y~~~~~~~~~~~v~ 264 (736)
.+.|+|+|++|++.++. .|. ....|+.++..+.......+. +....++|+|+| +|+.+.. ..+.++.
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g---~~~~~v~ 86 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYG---SMPAKVT 86 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEc---cCCcccE
Confidence 46899999999998772 221 146788888776655444332 335679999999 7776643 2233566
Q ss_pred EEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEE
Q 004690 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFF 344 (736)
Q Consensus 265 ~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~ 344 (736)
++++.. +.+.-+. .. ..-.+.|||+|++|++........+|.+.|..+.+ ..............|+|||++|+
T Consensus 87 lyd~~~---~~i~~~~--~~-~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~-~i~~~~~~~~t~~~WsPdGr~~~ 159 (194)
T PF08662_consen 87 LYDVKG---KKIFSFG--TQ-PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK-KISTFEHSDATDVEWSPDGRYLA 159 (194)
T ss_pred EEcCcc---cEeEeec--CC-CceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE-EeeccccCcEEEEEEcCCCCEEE
Confidence 777742 2222232 21 22257899999999987654444567888887543 21111222223356999999988
Q ss_pred EEEc
Q 004690 345 ITRR 348 (736)
Q Consensus 345 ~~t~ 348 (736)
..+.
T Consensus 160 ta~t 163 (194)
T PF08662_consen 160 TATT 163 (194)
T ss_pred EEEe
Confidence 7765
No 143
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.68 E-value=9.1e-08 Score=92.25 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=96.6
Q ss_pred CCCCCceEEEEEEeCCC----CeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEccc
Q 004690 479 FDTNNYFTERKWASASD----GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIR 554 (736)
Q Consensus 479 ~~~~~~~~~~~~~~s~d----G~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~R 554 (736)
|....|..+.+.+.+.. --..|..|+.|... +.+|+|+++||..- ....|....+.++..||+|++|+.-
T Consensus 9 F~~G~~~~~~~~Vd~s~~~~~spPkpLlI~tP~~~----G~yPVilF~HG~~l--~ns~Ys~lL~HIASHGfIVVAPQl~ 82 (307)
T PF07224_consen 9 FETGKYKTKLFNVDTSSNSSPSPPKPLLIVTPSEA----GTYPVILFLHGFNL--YNSFYSQLLAHIASHGFIVVAPQLY 82 (307)
T ss_pred eecCCceeEEEeecCCCCCCCCCCCCeEEecCCcC----CCccEEEEeechhh--hhHHHHHHHHHHhhcCeEEEechhh
Confidence 44455555555553211 13567777777654 88999999999332 2344777788999999999999975
Q ss_pred CCCCCChhhhhccccccCcChHHHHHHHHHHHHHc--------CCCCCCcEEEEEeChHHHHHHHHHHhCC-C-ceeEEE
Q 004690 555 GGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRP-D-LFKAAV 624 (736)
Q Consensus 555 G~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------~~~d~~ri~~~G~S~GG~la~~~~~~~p-~-~~~a~v 624 (736)
..-. ......+++..++++||.+. -..+.++++++|||.||-.|.++|..+. + .|.|+|
T Consensus 83 ~~~~-----------p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLI 151 (307)
T PF07224_consen 83 TLFP-----------PDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALI 151 (307)
T ss_pred cccC-----------CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhhee
Confidence 3211 23345568888999999753 1245689999999999999999888652 2 378888
Q ss_pred EcCCccch
Q 004690 625 AAVPFVDV 632 (736)
Q Consensus 625 ~~~p~~d~ 632 (736)
..-|+-..
T Consensus 152 GiDPV~G~ 159 (307)
T PF07224_consen 152 GIDPVAGT 159 (307)
T ss_pred cccccCCC
Confidence 88887554
No 144
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.68 E-value=8.3e-08 Score=98.61 Aligned_cols=114 Identities=13% Similarity=0.114 Sum_probs=78.8
Q ss_pred CCCCcEEEEecCCCCcCCCCCCch-hHHHHHH-CCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcC
Q 004690 513 DGSDPLLLYGYGSYEICNDPAFNS-SRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 590 (736)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 590 (736)
+...|++|++||..+... ..|.. ....|+. .+|.|+++|+++++... +..+.. .-...-+++...+++|.++.
T Consensus 33 ~~~~p~vilIHG~~~~~~-~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~~--~~~~v~~~la~~l~~L~~~~ 107 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGE-ESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAVN--NTRVVGAELAKFLDFLVDNT 107 (275)
T ss_pred CCCCCcEEEEcCCCCCCC-CcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHHH--hHHHHHHHHHHHHHHHHHhc
Confidence 345789999999554432 22333 3344554 58999999999863322 111100 11112357778888888775
Q ss_pred CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccc
Q 004690 591 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 631 (736)
Q Consensus 591 ~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d 631 (736)
..+.++|.++|||+||++++.++.+.|++++.+++..|...
T Consensus 108 g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 108 GLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred CCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 56778999999999999999999999999999998877543
No 145
>COG0627 Predicted esterase [General function prediction only]
Probab=98.64 E-value=4.9e-07 Score=93.37 Aligned_cols=208 Identities=17% Similarity=0.181 Sum_probs=125.9
Q ss_pred CCCCcEEEEecCCCCcCCC-CCCchhHHHHHHCCcEEEEEccc--------------CCC-CCChhhhhccccccCcChH
Q 004690 513 DGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIR--------------GGG-ELGRQWYENGKFLKKKNTF 576 (736)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~R--------------G~g-~~g~~~~~~~~~~~~~~~~ 576 (736)
+.+.|++++.||-...... .............|++++.+|.. |++ ++-..|.+...... ...+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-ccch
Confidence 4678899999884333211 11222233445568888887432 222 12223333221111 3455
Q ss_pred HHHHHH-HH-HHHHcCCCCC--CcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCC---CCC-------
Q 004690 577 TDFIAC-AE-YLIKNCYCTK--EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP---TIP------- 642 (736)
Q Consensus 577 ~D~~~~-~~-~l~~~~~~d~--~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~---~~p------- 642 (736)
++++.. +- .+.+...++. ++.+|.|+||||+-|+.+|+.+|++|+.+.+.+|+++....+... ..+
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~ 209 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFN 209 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHH
Confidence 666542 22 3333444454 389999999999999999999999999999999999876322111 000
Q ss_pred -----Ccccccc-------cc----cc---------ccccEEEeecCCCCCCC--ChHHHHHHHHHHhcCCCCCeEEEEe
Q 004690 643 -----LTTAEWE-------VK----AQ---------NYPHILVTAGLNDPRVM--YSEPAKFVAKLREMKTDDNILLFKC 695 (736)
Q Consensus 643 -----~~~~~~~-------i~----~~---------~~ppvLi~~G~~D~~Vp--~~~~~~~~~~l~~~~~~~~~~~~~~ 695 (736)
.....|. +. .. ..+++++-+|..|.... ...++++.+++++.+.+......
T Consensus 210 ~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~-- 287 (316)
T COG0627 210 AMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQ-- 287 (316)
T ss_pred HhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeC--
Confidence 0000111 22 11 44778999999998764 33478999999999988754443
Q ss_pred cCCCCcCCCCChHHHHHHHHHHHHHHHHhcCCC
Q 004690 696 ELGAGHFSKSGRFERLREAAFTYTFLMRALSML 728 (736)
Q Consensus 696 ~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~~~ 728 (736)
+++.|.. .-.-..+++.+.|+.+.|+..
T Consensus 288 -~~G~Hsw----~~w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 288 -PGGDHSW----YFWASQLADHLPWLAGALGLA 315 (316)
T ss_pred -CCCCcCH----HHHHHHHHHHHHHHHHHhccC
Confidence 5788853 222223666788999888754
No 146
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.62 E-value=1.7e-07 Score=94.52 Aligned_cols=109 Identities=18% Similarity=0.171 Sum_probs=66.4
Q ss_pred CcEEEEecCCCCcCC-CCCCchhHHHHHHCCcEEEEEcccC-CCCCChhhhhccccccCcChHHHHHHHHHHHHHc--CC
Q 004690 516 DPLLLYGYGSYEICN-DPAFNSSRLSLLDRGFIFAIAQIRG-GGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN--CY 591 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~-~~~~~~~~~~l~~~G~~v~~~d~RG-~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--~~ 591 (736)
.-+||++-|-...-. .++....+..|...||.++.+.++- .+++|.. .-.++.+|+.++++||+.. |.
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS---
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHHHHHHHHHhhccc
Confidence 457888866433322 3444455566766799999999885 3444432 1235679999999999987 22
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCC-----CceeEEEEcCCccch
Q 004690 592 CTKEKLCIEGRSAGGLLIGAVLNMRP-----DLFKAAVAAVPFVDV 632 (736)
Q Consensus 592 ~d~~ri~~~G~S~GG~la~~~~~~~p-----~~~~a~v~~~p~~d~ 632 (736)
...++|++||||-|..-++.++.... ..+.++|+++|+.|-
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 35689999999999999988887532 468999999999883
No 147
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.61 E-value=5.7e-05 Score=78.66 Aligned_cols=240 Identities=14% Similarity=0.098 Sum_probs=127.7
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~ 272 (736)
....|||||+.++.+.... ..|+++|+.+++.... ........+.|+|||..+|+.... ...++.+++.+.
T Consensus 34 ~~l~~~~dg~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~l~~~d~~~~- 105 (300)
T TIGR03866 34 RGITLSKDGKLLYVCASDS----DTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANED---DNLVTVIDIETR- 105 (300)
T ss_pred CceEECCCCCEEEEEECCC----CeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCC---CCeEEEEECCCC-
Confidence 4578999999875554322 3699999999887542 222223458899999544544321 135888888764
Q ss_pred CCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEE-eeccccceeEEEeeeCCEEEEEEcCCC
Q 004690 273 SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPRVVGVDTAASHRGNHFFITRRSDE 351 (736)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-l~~~~~~~~~~~s~dg~~l~~~t~~~~ 351 (736)
+....+... .....+.++|||+++++..... ..++.+|..+++ ... +..........|+++|+.|++.+..+
T Consensus 106 -~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~--~~~~~~d~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~- 178 (300)
T TIGR03866 106 -KVLAEIPVG--VEPEGMAVSPDGKIVVNTSETT--NMAHFIDTKTYE-IVDNVLVDQRPRFAEFTADGKELWVSSEIG- 178 (300)
T ss_pred -eEEeEeeCC--CCcceEEECCCCCEEEEEecCC--CeEEEEeCCCCe-EEEEEEcCCCccEEEECCCCCEEEEEcCCC-
Confidence 222222211 1123578999999988765432 345667877655 221 11111112245899999887765443
Q ss_pred CCCcEEEEEeCCCCCceeeEecCC-----CCceeeeEE--EeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceee
Q 004690 352 LFNSELLACPVDNTSETTVLIPHR-----ESVKLQDIQ--LFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVE 424 (736)
Q Consensus 352 ~~~~~l~~~~~~~~~~~~~l~~~~-----~~~~i~~~~--~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~ 424 (736)
..+..+|+.+......+.... ......++. .+++.+++....+ ..+.++++.. ++.. ..+.
T Consensus 179 ---~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~--~~i~v~d~~~-~~~~------~~~~ 246 (300)
T TIGR03866 179 ---GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA--NRVAVVDAKT-YEVL------DYLL 246 (300)
T ss_pred ---CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCC--CeEEEEECCC-CcEE------EEEE
Confidence 457778876532211111010 111222343 3444554443322 3588888753 2211 1111
Q ss_pred ecCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCc
Q 004690 425 FIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 425 ~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~ 466 (736)
... .+..+..++++..++.+ + ..-+.+..+|+.+++
T Consensus 247 ~~~---~~~~~~~~~~g~~l~~~-~--~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 247 VGQ---RVWQLAFTPDEKYLLTT-N--GVSNDVSVIDVAALK 282 (300)
T ss_pred eCC---CcceEEECCCCCEEEEE-c--CCCCeEEEEECCCCc
Confidence 111 12233445566655332 1 223468889988876
No 148
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.59 E-value=1e-07 Score=108.72 Aligned_cols=127 Identities=15% Similarity=0.149 Sum_probs=81.0
Q ss_pred EEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCC--CCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccc-cc-cCc
Q 004690 498 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK-FL-KKK 573 (736)
Q Consensus 498 ~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~-~~-~~~ 573 (736)
-+.+.|+.|... ..+.+.||+|++|||.-..... ........++.++++|+.+|||-+- +| |-..+. .. .+.
T Consensus 108 CL~LnI~~P~~~-~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~-~G--fl~~~~~~~~~gN 183 (535)
T PF00135_consen 108 CLYLNIYTPSNA-SSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGA-FG--FLSLGDLDAPSGN 183 (535)
T ss_dssp --EEEEEEETSS-SSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HH-HH--H-BSSSTTSHBST
T ss_pred HHHHhhhhcccc-ccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccc-cc--cccccccccCchh
Confidence 366778899886 4444799999999974333222 1222234567889999999999421 11 000000 01 244
Q ss_pred ChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEcCC
Q 004690 574 NTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVP 628 (736)
Q Consensus 574 ~~~~D~~~~~~~l~~~---~~~d~~ri~~~G~S~GG~la~~~~~~--~p~~~~a~v~~~p 628 (736)
..+.|.+.|++|+.++ -.-||++|.|+|+|+||..+...+.. ...+|+.+|+.+|
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 5679999999999875 23599999999999999998877765 2358999999998
No 149
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.59 E-value=1.1e-06 Score=106.99 Aligned_cols=102 Identities=12% Similarity=0.048 Sum_probs=62.0
Q ss_pred CcEEEEecCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHH----HHHHHHHHHHH
Q 004690 516 DPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT----DFIACAEYLIK 588 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~----D~~~~~~~l~~ 588 (736)
.|.||++||.......+...+ ....|+++||.|+++|+. ..+.. + +. ....+. ++.++++.+.+
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G---~~~~~--~-~~---~~~~l~~~i~~l~~~l~~v~~ 137 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG---SPDKV--E-GG---MERNLADHVVALSEAIDTVKD 137 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC---CCChh--H-cC---ccCCHHHHHHHHHHHHHHHHH
Confidence 467899999655443322221 256888999999999962 22211 0 00 012223 33444444443
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEcCCc
Q 004690 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPF 629 (736)
Q Consensus 589 ~~~~d~~ri~~~G~S~GG~la~~~~~~~-p~~~~a~v~~~p~ 629 (736)
.. .+++.++|+||||.+++.+++.+ |++++.+|+.+..
T Consensus 138 ~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~ 176 (994)
T PRK07868 138 VT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSP 176 (994)
T ss_pred hh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecc
Confidence 33 25799999999999998887644 5578888764443
No 150
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.58 E-value=1.5e-07 Score=86.67 Aligned_cols=189 Identities=16% Similarity=0.110 Sum_probs=113.5
Q ss_pred EEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCc
Q 004690 518 LLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (736)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 596 (736)
.||.+-|.-|+... .|.+....+-.. -+.+++.|.||.|.+-..-.+ ..-+--.+|..+|++-+... +-.+
T Consensus 44 ~iLlipGalGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~Rk----f~~~ff~~Da~~avdLM~aL---k~~~ 115 (277)
T KOG2984|consen 44 YILLIPGALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERK----FEVQFFMKDAEYAVDLMEAL---KLEP 115 (277)
T ss_pred eeEecccccccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCccc----chHHHHHHhHHHHHHHHHHh---CCCC
Confidence 46667786665543 377766655443 389999999998764321111 11122347888888888775 3479
Q ss_pred EEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc--cchhhhccCCC------------CCCc--------ccccc-----
Q 004690 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF--VDVLTTMLDPT------------IPLT--------TAEWE----- 649 (736)
Q Consensus 597 i~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~--~d~~~~~~~~~------------~p~~--------~~~~~----- 649 (736)
+.++|+|-||..++.+|+++++.+.-.|.+.+- ++-...|.-.+ .|.. ...|.
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~ 195 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDV 195 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHH
Confidence 999999999999999999999877665555432 22111111000 0100 00111
Q ss_pred ---------------ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHH
Q 004690 650 ---------------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREA 714 (736)
Q Consensus 650 ---------------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 714 (736)
+-+..+.|+||+||..|+.|+-.++--+-. + ....+..++ +.++|.+--.-.+.++..
T Consensus 196 v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~-~---~~~a~~~~~---peGkHn~hLrya~eFnkl 268 (277)
T KOG2984|consen 196 VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPV-L---KSLAKVEIH---PEGKHNFHLRYAKEFNKL 268 (277)
T ss_pred HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhh-h---cccceEEEc---cCCCcceeeechHHHHHH
Confidence 222344569999999999999887643332 2 222333344 589998754444444443
Q ss_pred HHHHHHHHH
Q 004690 715 AFTYTFLMR 723 (736)
Q Consensus 715 a~~~~fl~~ 723 (736)
+.+||.+
T Consensus 269 --v~dFl~~ 275 (277)
T KOG2984|consen 269 --VLDFLKS 275 (277)
T ss_pred --HHHHHhc
Confidence 6778865
No 151
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.55 E-value=2.9e-06 Score=88.49 Aligned_cols=185 Identities=22% Similarity=0.348 Sum_probs=110.5
Q ss_pred EEEEE-ecCCccCCCCCcEEEEecCCC-CcCCCCCCchh---HHHHHHCCcEEEEEcccCCC--CCChhhhhccccccCc
Q 004690 501 ICIVY-RKNLVKLDGSDPLLLYGYGSY-EICNDPAFNSS---RLSLLDRGFIFAIAQIRGGG--ELGRQWYENGKFLKKK 573 (736)
Q Consensus 501 ~~~~~-p~~~~~~~~~~P~vl~~hGg~-~~~~~~~~~~~---~~~l~~~G~~v~~~d~RG~g--~~g~~~~~~~~~~~~~ 573 (736)
.|++. |.+. + .+.-|+|||+|||. -....+..-.. ...+.+ ...+++.||.-.. +.| ..-+
T Consensus 108 ~Wlvk~P~~~-~-pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~---------~~yP 175 (374)
T PF10340_consen 108 YWLVKAPNRF-K-PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHG---------HKYP 175 (374)
T ss_pred EEEEeCCccc-C-CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCC---------CcCc
Confidence 45554 4432 2 23459999999973 33333321111 123333 6689999997543 111 1224
Q ss_pred ChHHHHHHHHHHHH-HcCCCCCCcEEEEEeChHHHHHHHHHHh--C---CCceeEEEEcCCccchhhh-------cc---
Q 004690 574 NTFTDFIACAEYLI-KNCYCTKEKLCIEGRSAGGLLIGAVLNM--R---PDLFKAAVAAVPFVDVLTT-------ML--- 637 (736)
Q Consensus 574 ~~~~D~~~~~~~l~-~~~~~d~~ri~~~G~S~GG~la~~~~~~--~---p~~~~a~v~~~p~~d~~~~-------~~--- 637 (736)
.++.++++..++|+ +.|. ++|.+||.|+||.|++.++.. . ...-+.+|+.+|.+++... +.
T Consensus 176 tQL~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~ 252 (374)
T PF10340_consen 176 TQLRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNE 252 (374)
T ss_pred hHHHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCccccccc
Confidence 56789999999999 5554 689999999999999877642 1 1235899999999887621 10
Q ss_pred -------------------C--C-----CCCCcc-------cccc-ccccccccEEEeecCCCCCCCChHHHHHHHHHHh
Q 004690 638 -------------------D--P-----TIPLTT-------AEWE-VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 683 (736)
Q Consensus 638 -------------------~--~-----~~p~~~-------~~~~-i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~ 683 (736)
+ + ..|... ..|. | .....++|+.|+++ |--.+..+|++++..
T Consensus 253 ~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I--~~~~~vfVi~Ge~E--vfrddI~~~~~~~~~ 328 (374)
T PF10340_consen 253 KRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDI--LKKYSVFVIYGEDE--VFRDDILEWAKKLND 328 (374)
T ss_pred cccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHh--ccCCcEEEEECCcc--ccHHHHHHHHHHHhh
Confidence 0 0 000000 0111 2 12235999999998 456689999999986
Q ss_pred cCCC--CCeEEEEecCCCCcCCC
Q 004690 684 MKTD--DNILLFKCELGAGHFSK 704 (736)
Q Consensus 684 ~~~~--~~~~~~~~~~~~gH~~~ 704 (736)
.+.. ....-+.+++++.|...
T Consensus 329 ~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 329 VKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred cCccccCCcceEEEecCCccccc
Confidence 6533 11112223458899653
No 152
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.53 E-value=9.7e-07 Score=84.33 Aligned_cols=196 Identities=17% Similarity=0.136 Sum_probs=108.6
Q ss_pred EeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC-CCCChhhhhcccc
Q 004690 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG-GELGRQWYENGKF 569 (736)
Q Consensus 491 ~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~-g~~g~~~~~~~~~ 569 (736)
+.-.+|.+|..|-..|+.. ...++|+||..-| |+..+. .|...+.+|+..||.|+.+|.--+ |.+...-.+-.+
T Consensus 7 i~~~~~~~I~vwet~P~~~--~~~~~~tiliA~G-f~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm- 81 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNN--EPKRNNTILIAPG-FARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM- 81 (294)
T ss_dssp EEETTTEEEEEEEE---TT--S---S-EEEEE-T-T-GGGG-GGHHHHHHHHTTT--EEEE---B-------------H-
T ss_pred eEcCCCCEEEEeccCCCCC--CcccCCeEEEecc-hhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcch-
Confidence 4456899999998888864 4456788998877 665554 488889999999999999986533 222211111000
Q ss_pred ccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhcc---------C--
Q 004690 570 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---------D-- 638 (736)
Q Consensus 570 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~---------~-- 638 (736)
....+|+..+++||.+.|. .+++++-.|.-|-+|..+++. ++ ..-+|..+|++|+..++. .
T Consensus 82 ---s~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~~~i 153 (294)
T PF02273_consen 82 ---SIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQLPI 153 (294)
T ss_dssp ---HHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGGS-G
T ss_pred ---HHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhhcch
Confidence 1123789999999998875 679999999999999999995 54 688888999999865421 0
Q ss_pred CCCCCcccccc---------------------------ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeE
Q 004690 639 PTIPLTTAEWE---------------------------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 691 (736)
Q Consensus 639 ~~~p~~~~~~~---------------------------i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~ 691 (736)
..+|.. ..++ ++. ...|++.+++.+|..|...+..++.+.+.... .+
T Consensus 154 ~~lp~d-ldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~-l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~--~k-- 227 (294)
T PF02273_consen 154 EQLPED-LDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKR-LSIPFIAFTANDDDWVKQSEVEELLDNINSNK--CK-- 227 (294)
T ss_dssp GG--SE-EEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT---S-EEEEEETT-TTS-HHHHHHHHTT-TT----EE--
T ss_pred hhCCCc-ccccccccchHHHHHHHHHcCCccchhHHHHHhh-CCCCEEEEEeCCCccccHHHHHHHHHhcCCCc--ee--
Confidence 011211 1111 222 23469999999999999888777766553322 22
Q ss_pred EEEecCCCCcCCCCC
Q 004690 692 LFKCELGAGHFSKSG 706 (736)
Q Consensus 692 ~~~~~~~~gH~~~~~ 706 (736)
+| .-+|+.|-...+
T Consensus 228 ly-sl~Gs~HdL~en 241 (294)
T PF02273_consen 228 LY-SLPGSSHDLGEN 241 (294)
T ss_dssp EE-EETT-SS-TTSS
T ss_pred EE-EecCccchhhhC
Confidence 23 335999987665
No 153
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.52 E-value=6.4e-07 Score=96.35 Aligned_cols=112 Identities=8% Similarity=-0.012 Sum_probs=76.9
Q ss_pred CCCcEEEEecCCCCcCCCCCCch-hHHHHHH--CCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLD--RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 590 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~--~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 590 (736)
...|++|++||.........|.. ....|.. ..+.|+++|.+|+|.... ..+.. .-...-+++.+.+++|.+..
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y--~~a~~--~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHY--PTSAA--YTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCC--ccccc--cHHHHHHHHHHHHHHHHHhh
Confidence 45689999999544332223444 3334443 269999999999875422 11111 11122356777788887553
Q ss_pred CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 591 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 591 ~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
..+.+++.++|||+||++++.++...|+++..+++..|.
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 356789999999999999999999999999999988774
No 154
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.52 E-value=1.4e-06 Score=95.35 Aligned_cols=89 Identities=17% Similarity=0.155 Sum_probs=62.7
Q ss_pred chhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH---
Q 004690 535 NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA--- 611 (736)
Q Consensus 535 ~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~--- 611 (736)
....++|+++|+.|++++.|.-+...+.|.-. .-++.+.+|++.+.+. +...+|-++|+|+||.+++.
T Consensus 237 ~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ld-------DYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~~~a 307 (560)
T TIGR01839 237 KSFVQYCLKNQLQVFIISWRNPDKAHREWGLS-------TYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAALVG 307 (560)
T ss_pred chHHHHHHHcCCeEEEEeCCCCChhhcCCCHH-------HHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHHHHH
Confidence 45678999999999999998755432222110 0013455566666554 45578999999999999886
Q ss_pred -HHHhCCC-ceeEEEEcCCccch
Q 004690 612 -VLNMRPD-LFKAAVAAVPFVDV 632 (736)
Q Consensus 612 -~~~~~p~-~~~a~v~~~p~~d~ 632 (736)
+++++++ .++.+++.+..+|+
T Consensus 308 ~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 308 HLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHhcCCCCceeeEEeeeccccc
Confidence 6777785 79998888777764
No 155
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.50 E-value=1.9e-05 Score=81.80 Aligned_cols=241 Identities=11% Similarity=0.177 Sum_probs=155.3
Q ss_pred EEECCC--CCEEEEEEeCCCCcEEEEEEEECCCCCeecccc-cCccceeEEeeCC-eEEEEEe--CCCCCCceEEEEEcC
Q 004690 196 FQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITM--DEILRPDKAWLHKLE 269 (736)
Q Consensus 196 ~~~SPD--G~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg-~l~y~~~--~~~~~~~~v~~~~l~ 269 (736)
.-..|| |.+|.|+.. -+||..++.+|+.++++. -++...+.++||| .++|++. ..+.....||.++..
T Consensus 42 ~~l~PDI~GD~IiFt~~------DdlWe~slk~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e 115 (668)
T COG4946 42 YYLNPDIYGDRIIFTCC------DDLWEYSLKDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSE 115 (668)
T ss_pred hhcCCcccCcEEEEEec------hHHHHhhhccCCeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCC
Confidence 345566 889999886 358999999999887643 3566678999999 8999654 344556689999988
Q ss_pred CCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCc---ceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEE
Q 004690 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK---ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFIT 346 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~---~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 346 (736)
.++.+.++-| + ..|.--..|+|||+.|+.+-... .-.++|.+..++.+ ..+|.-+. . ...+-.|| .+++.
T Consensus 116 ~Ge~kRiTyf-G--r~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~-~e~LnlGp-a-thiv~~dg-~ivig 188 (668)
T COG4946 116 DGEAKRITYF-G--RRFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIK-TEPLNLGP-A-THIVIKDG-IIVIG 188 (668)
T ss_pred CCcEEEEEEe-c--cccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCce-eeeccCCc-e-eeEEEeCC-EEEEc
Confidence 8866555555 2 22322245999999776654332 23689999998875 44443221 1 12244555 56666
Q ss_pred EcCC---------CCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccc
Q 004690 347 RRSD---------ELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSL 417 (736)
Q Consensus 347 t~~~---------~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l 417 (736)
.|.- |..+++|+.-...+ ...+.++.-.. .+....+.++++||....+|..+|+-.+++ |+.+
T Consensus 189 RntydLP~WK~YkGGtrGklWis~d~g-~tFeK~vdl~~--~vS~PmIV~~RvYFlsD~eG~GnlYSvdld--GkDl--- 260 (668)
T COG4946 189 RNTYDLPHWKGYKGGTRGKLWISSDGG-KTFEKFVDLDG--NVSSPMIVGERVYFLSDHEGVGNLYSVDLD--GKDL--- 260 (668)
T ss_pred cCcccCcccccccCCccceEEEEecCC-cceeeeeecCC--CcCCceEEcceEEEEecccCccceEEeccC--Cchh---
Confidence 6541 24456676644332 23444554433 355667788999999999999998877776 6543
Q ss_pred cCCceeeecCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCcEE
Q 004690 418 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (736)
Q Consensus 418 ~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~ 468 (736)
.+...|.+ ...-+.+-|+.+++|+- -+.+|.||+++.+.+
T Consensus 261 --rrHTnFtd----YY~R~~nsDGkrIvFq~-----~GdIylydP~td~le 300 (668)
T COG4946 261 --RRHTNFTD----YYPRNANSDGKRIVFQN-----AGDIYLYDPETDSLE 300 (668)
T ss_pred --hhcCCchh----ccccccCCCCcEEEEec-----CCcEEEeCCCcCcce
Confidence 12223321 12234556788888765 467999999887644
No 156
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.49 E-value=7.8e-06 Score=92.28 Aligned_cols=159 Identities=12% Similarity=0.044 Sum_probs=99.7
Q ss_pred EEeeEEECCCCCEEEEEEeC---CCCcEEEEEEEECCCCCeecccccCccceeEEeeCC-eEEEEEeCC-------CCCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDT---KGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDE-------ILRP 260 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~---~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg-~l~y~~~~~-------~~~~ 260 (736)
.++.+++||||+++||.... .++...+||+.+.. ++..+.+.......++|+||| .|+|+.... ....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~ 429 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT 429 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence 46789999999999999842 22346799999974 444443322235679999998 788876431 1122
Q ss_pred ceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEE---EeCCCCC----ceEEeeccccc--
Q 004690 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY---LDVSKPE----ELRVLTPRVVG-- 331 (736)
Q Consensus 261 ~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~---~dl~~~~----~~~~l~~~~~~-- 331 (736)
.++|.+.+..+... . ..+ .-..++.|||||++|++... .+||+ +...+|+ .++.+.....+
T Consensus 430 gql~~~~vd~ge~~--~---~~~-g~Issl~wSpDG~RiA~i~~----g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~ 499 (591)
T PRK13616 430 GQLARTPVDASAVA--S---RVP-GPISELQLSRDGVRAAMIIG----GKVYLAVVEQTEDGQYALTNPREVGPGLGDTA 499 (591)
T ss_pred ceEEEEeccCchhh--h---ccC-CCcCeEEECCCCCEEEEEEC----CEEEEEEEEeCCCCceeecccEEeecccCCcc
Confidence 46777777655321 1 111 11346889999999999873 36777 5555554 12234443333
Q ss_pred eeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCC
Q 004690 332 VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 365 (736)
Q Consensus 332 ~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~ 365 (736)
....|..++. |++.+.. .+..++.+++++.
T Consensus 500 ~~l~W~~~~~-L~V~~~~---~~~~v~~v~vDG~ 529 (591)
T PRK13616 500 VSLDWRTGDS-LVVGRSD---PEHPVWYVNLDGS 529 (591)
T ss_pred ccceEecCCE-EEEEecC---CCCceEEEecCCc
Confidence 2234777665 7666553 3466899999874
No 157
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.48 E-value=1.2e-05 Score=71.54 Aligned_cols=166 Identities=18% Similarity=0.187 Sum_probs=99.1
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC--CCCChhhhhccccccCcC-hHHHHHHHHHHHHHcCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG--GELGRQWYENGKFLKKKN-TFTDFIACAEYLIKNCY 591 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~--g~~g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~ 591 (736)
..-+||+.||.......+.+...+..|+.+|+.|+.+++.-- -..|+. +-..... .-...+.++..|...+
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r-----kPp~~~~t~~~~~~~~~aql~~~l- 86 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRR-----KPPPGSGTLNPEYIVAIAQLRAGL- 86 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCC-----CCcCccccCCHHHHHHHHHHHhcc-
Confidence 345778889977776677777777899999999999987410 000100 0001111 1245566666776654
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEE-cCCccchhhhccCCCCCCccccccccccccccEEEeecCCCCCCC
Q 004690 592 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA-AVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAGLNDPRVM 670 (736)
Q Consensus 592 ~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~-~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G~~D~~Vp 670 (736)
+..++++-|+||||-++..++..--..+.+++| .+||... +.|....--.+ .....|+||+||+.|+.=.
T Consensus 87 -~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp-------GKPe~~Rt~HL-~gl~tPtli~qGtrD~fGt 157 (213)
T COG3571 87 -AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP-------GKPEQLRTEHL-TGLKTPTLITQGTRDEFGT 157 (213)
T ss_pred -cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCC-------CCcccchhhhc-cCCCCCeEEeecccccccC
Confidence 346899999999999998877642222555554 4565432 22211000001 1245679999999998766
Q ss_pred ChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCC
Q 004690 671 YSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 703 (736)
Q Consensus 671 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 703 (736)
-.+...+ ....+.+++++. ++.|-.
T Consensus 158 r~~Va~y-----~ls~~iev~wl~---~adHDL 182 (213)
T COG3571 158 RDEVAGY-----ALSDPIEVVWLE---DADHDL 182 (213)
T ss_pred HHHHHhh-----hcCCceEEEEec---cCcccc
Confidence 5554222 123455666775 888954
No 158
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.46 E-value=0.00033 Score=70.98 Aligned_cols=263 Identities=14% Similarity=0.139 Sum_probs=144.4
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc---cccCcc-ceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVT-ASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~---~~~~~~-~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
.+.+.|+|++++|.-....+......-|-+|-++|+...+ .+.+.. ..++.++||+++|++.-.. ..|-+..+
T Consensus 42 ptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~---g~v~v~p~ 118 (346)
T COG2706 42 PTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHS---GSVSVYPL 118 (346)
T ss_pred CceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccC---ceEEEEEc
Confidence 4567899999887444333222235667777777776532 333332 4578899997777765322 12444444
Q ss_pred CCCCCC----cEEEEeec--C----CceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEE-----eecccccee
Q 004690 269 EADQSN----DICLYHEK--D----DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-----LTPRVVGVD 333 (736)
Q Consensus 269 ~t~~~~----~~~~~~~~--~----~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-----l~~~~~~~~ 333 (736)
.....- +.....+. + ........++|||++|+...- +..+|++.+++.|. +.. +.++..-..
T Consensus 119 ~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL--G~Dri~~y~~~dg~-L~~~~~~~v~~G~GPRH 195 (346)
T COG2706 119 QADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL--GTDRIFLYDLDDGK-LTPADPAEVKPGAGPRH 195 (346)
T ss_pred ccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec--CCceEEEEEcccCc-cccccccccCCCCCcce
Confidence 332110 01111111 0 111223568999999886543 34457777777776 222 222222223
Q ss_pred EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceee-----EecCC--CCceeeeEEEeCCEEEEEEEeCCeeEEEEEE
Q 004690 334 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-----LIPHR--ESVKLQDIQLFIDHLAVYEREGGLQKITTYR 406 (736)
Q Consensus 334 ~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~-----l~~~~--~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~ 406 (736)
..|.|+|+..|++..-++ .-.++.++-.. +..+. .+|.+ ......++.++.++-+++..+.|...|.++.
T Consensus 196 i~FHpn~k~aY~v~EL~s--tV~v~~y~~~~-g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~ 272 (346)
T COG2706 196 IVFHPNGKYAYLVNELNS--TVDVLEYNPAV-GKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFS 272 (346)
T ss_pred EEEcCCCcEEEEEeccCC--EEEEEEEcCCC-ceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEE
Confidence 458899998888776642 23334443321 22111 23322 2234556778888888888888888999999
Q ss_pred cCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCcEEEE
Q 004690 407 LPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 470 (736)
Q Consensus 407 l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~ 470 (736)
++..++.+.-. . . .+..+-.-..++.+.+++.++++-....+ -.+|..|.++|+.+++
T Consensus 273 V~~~~g~L~~~---~-~-~~teg~~PR~F~i~~~g~~Liaa~q~sd~-i~vf~~d~~TG~L~~~ 330 (346)
T COG2706 273 VDPDGGKLELV---G-I-TPTEGQFPRDFNINPSGRFLIAANQKSDN-ITVFERDKETGRLTLL 330 (346)
T ss_pred EcCCCCEEEEE---E-E-eccCCcCCccceeCCCCCEEEEEccCCCc-EEEEEEcCCCceEEec
Confidence 98776533110 0 0 11111011245666666666665555544 6788999888885443
No 159
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.45 E-value=6.7e-06 Score=84.35 Aligned_cols=124 Identities=15% Similarity=0.071 Sum_probs=81.8
Q ss_pred eEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhcc-------ccccC
Q 004690 500 PICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG-------KFLKK 572 (736)
Q Consensus 500 ~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~-------~~~~~ 572 (736)
...++.|+.. . ....|++|++.|.............+..|++.|+..++...+-.|..-..-.... ....+
T Consensus 78 ~~~~~~P~~~-~-~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 78 RFQLLLPKRW-D-SPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred EEEEEECCcc-c-cCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHH
Confidence 3445667654 1 2457999999885443332222333567888899999987665443221111100 11222
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 573 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 573 ~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
...+.+..+.+.|+.++|+ .++++.|.||||++|..+++..|..+.++-+.++
T Consensus 156 ~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 156 RATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred hHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 4467888899999999987 5899999999999999999999986655544443
No 160
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.44 E-value=1.6e-05 Score=80.93 Aligned_cols=192 Identities=16% Similarity=0.158 Sum_probs=111.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
+-..++||+|++||-+..... .-||.+..++.-.+..++.+ ..+.+.||||+ .++-...++ .++++++
T Consensus 227 VWfl~FS~nGkyLAsaSkD~T---aiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e-----~~~lwDv 298 (519)
T KOG0293|consen 227 VWFLQFSHNGKYLASASKDST---AIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE-----VLSLWDV 298 (519)
T ss_pred EEEEEEcCCCeeEeeccCCce---EEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH-----heeeccC
Confidence 556799999999996654321 23444444433111124433 24568999999 565544443 2788898
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC--ceEEeeccccce-eEEEeeeCCEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGV-DTAASHRGNHFFI 345 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~--~~~~l~~~~~~~-~~~~s~dg~~l~~ 345 (736)
.++ +-...|...-+.-..+.+|-|||..++..+.+ ..++..|+++.. .++-+.. ..+ ...+++||++++.
T Consensus 299 ~tg--d~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d---r~i~~wdlDgn~~~~W~gvr~--~~v~dlait~Dgk~vl~ 371 (519)
T KOG0293|consen 299 DTG--DLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD---RTIIMWDLDGNILGNWEGVRD--PKVHDLAITYDGKYVLL 371 (519)
T ss_pred Ccc--hhhhhcccCcCCCcceeEEccCCceeEecCCC---CcEEEecCCcchhhccccccc--ceeEEEEEcCCCcEEEE
Confidence 887 44455644422223468899999997665544 457888887643 2222211 112 2347899999988
Q ss_pred EEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 346 ~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
++... ++..++.++. ...-++.++. .+..++++++.-++..+-.. ..+++|++.
T Consensus 372 v~~d~-----~i~l~~~e~~-~dr~lise~~--~its~~iS~d~k~~LvnL~~-qei~LWDl~ 425 (519)
T KOG0293|consen 372 VTVDK-----KIRLYNREAR-VDRGLISEEQ--PITSFSISKDGKLALVNLQD-QEIHLWDLE 425 (519)
T ss_pred Eeccc-----ceeeechhhh-hhhccccccC--ceeEEEEcCCCcEEEEEccc-CeeEEeecc
Confidence 87543 3444554431 1112555443 46678888775444443222 347888887
No 161
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.42 E-value=3.3e-06 Score=85.31 Aligned_cols=193 Identities=17% Similarity=0.179 Sum_probs=115.3
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (736)
.+.|.++.+||-.|+.. .|......|+.. |--++.+|.|-+|.+...- ........+|+...++.......
T Consensus 50 ~~~Pp~i~lHGl~GS~~--Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-----~h~~~~ma~dv~~Fi~~v~~~~~- 121 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE--NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-----VHNYEAMAEDVKLFIDGVGGSTR- 121 (315)
T ss_pred CCCCceEEecccccCCC--CHHHHHHHhcccccCceEEEecccCCCCcccc-----ccCHHHHHHHHHHHHHHcccccc-
Confidence 46788999999888764 367777777765 8899999999998765321 11123334555555555543322
Q ss_pred CCCcEEEEEeChHH-HHHHHHHHhCCCceeEEE-E-cCC-ccc--------hhhhcc--CCCC---C-------------
Q 004690 593 TKEKLCIEGRSAGG-LLIGAVLNMRPDLFKAAV-A-AVP-FVD--------VLTTML--DPTI---P------------- 642 (736)
Q Consensus 593 d~~ri~~~G~S~GG-~la~~~~~~~p~~~~a~v-~-~~p-~~d--------~~~~~~--~~~~---p------------- 642 (736)
-.++.++|||||| -++++.+..+|++..-+| . .+| .+. ....|. +... +
T Consensus 122 -~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~ 200 (315)
T KOG2382|consen 122 -LDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG 200 (315)
T ss_pred -cCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh
Confidence 3579999999999 566666667787754333 2 233 111 001110 0000 0
Q ss_pred ------------------Ccccccc---------------------cccc-ccccEEEeecCCCCCCCChHHHHHHHHHH
Q 004690 643 ------------------LTTAEWE---------------------VKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLR 682 (736)
Q Consensus 643 ------------------~~~~~~~---------------------i~~~-~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~ 682 (736)
.....|. +... ...|+|+++|.++..||..+-..+....
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~f- 279 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIF- 279 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhc-
Confidence 0000111 1001 2347999999999999987655554433
Q ss_pred hcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHh
Q 004690 683 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 683 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~ 724 (736)
..+++..++ ++||.......+..-+. +..||..+
T Consensus 280 ---p~~e~~~ld---~aGHwVh~E~P~~~~~~--i~~Fl~~~ 313 (315)
T KOG2382|consen 280 ---PNVEVHELD---EAGHWVHLEKPEEFIES--ISEFLEEP 313 (315)
T ss_pred ---cchheeecc---cCCceeecCCHHHHHHH--HHHHhccc
Confidence 335566664 79999876666655553 55677654
No 162
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.39 E-value=8.6e-06 Score=77.25 Aligned_cols=125 Identities=18% Similarity=0.184 Sum_probs=84.3
Q ss_pred hHHH-HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---------CCCceeEEEEcCCccchhhhccCCCCCCc
Q 004690 575 TFTD-FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---------RPDLFKAAVAAVPFVDVLTTMLDPTIPLT 644 (736)
Q Consensus 575 ~~~D-~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~---------~p~~~~a~v~~~p~~d~~~~~~~~~~p~~ 644 (736)
.++. +....+|+.++|..| +|+|+|.|+.|++.+++. .| -|+-+|..+|+.-.-..+..
T Consensus 87 ~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~~~~~~~------ 155 (230)
T KOG2551|consen 87 GFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFPSKKLDE------ 155 (230)
T ss_pred ChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCCcchhhh------
Confidence 3444 566677888889886 899999999999988872 12 36888888886543111110
Q ss_pred cccccccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHh
Q 004690 645 TAEWEVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 724 (736)
Q Consensus 645 ~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~ 724 (736)
.+ .......|.|-+.|+.|.+||...+..+++....+ .++.. .+||...... ...+. +.+|+...
T Consensus 156 --~~-~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~H---pggH~VP~~~-~~~~~---i~~fi~~~ 220 (230)
T KOG2551|consen 156 --SA-YKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-----TVLEH---PGGHIVPNKA-KYKEK---IADFIQSF 220 (230)
T ss_pred --hh-hccCCCCCeeEEecccceeecchHHHHHHHhcCCC-----eEEec---CCCccCCCch-HHHHH---HHHHHHHH
Confidence 00 22223445999999999999999999999987655 34444 6899886544 33333 45666554
Q ss_pred c
Q 004690 725 L 725 (736)
Q Consensus 725 l 725 (736)
+
T Consensus 221 ~ 221 (230)
T KOG2551|consen 221 L 221 (230)
T ss_pred H
Confidence 4
No 163
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.38 E-value=9.7e-05 Score=76.92 Aligned_cols=193 Identities=15% Similarity=0.173 Sum_probs=105.4
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~ 272 (736)
..+.|+|||+.++.+.... ..|+++|+.+++.+.. ........++|+|||.++++..... ..++.++..+..
T Consensus 76 ~~~~~~~~g~~l~~~~~~~----~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~---~~~~~~d~~~~~ 148 (300)
T TIGR03866 76 ELFALHPNGKILYIANEDD----NLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETT---NMAHFIDTKTYE 148 (300)
T ss_pred cEEEECCCCCEEEEEcCCC----CeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCC---CeEEEEeCCCCe
Confidence 3568999999876554322 3699999998765432 2122235589999995444433221 134455665441
Q ss_pred CCcEE-EEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc-----cc---eeEEEeeeCCEE
Q 004690 273 SNDIC-LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-----VG---VDTAASHRGNHF 343 (736)
Q Consensus 273 ~~~~~-~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-----~~---~~~~~s~dg~~l 343 (736)
... +..... ...+.|++||++|++.... ...|+++|+.+++....+.... .. ....++++|+.+
T Consensus 149 --~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~--~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~ 221 (300)
T TIGR03866 149 --IVDNVLVDQR---PRFAEFTADGKELWVSSEI--GGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTA 221 (300)
T ss_pred --EEEEEEcCCC---ccEEEECCCCCEEEEEcCC--CCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEE
Confidence 111 111111 1246789999998876432 2458888988765122222111 11 123478999987
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEE--eCCEEEEEEEeCCeeEEEEEEcCC
Q 004690 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQL--FIDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~--~~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
|+....+ .++..+|+.+. .....+.... .+..+.+ ++++++.....++ .|.+|++..
T Consensus 222 ~~~~~~~----~~i~v~d~~~~-~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~~--~i~v~d~~~ 280 (300)
T TIGR03866 222 FVALGPA----NRVAVVDAKTY-EVLDYLLVGQ--RVWQLAFTPDEKYLLTTNGVSN--DVSVIDVAA 280 (300)
T ss_pred EEEcCCC----CeEEEEECCCC-cEEEEEEeCC--CcceEEECCCCCEEEEEcCCCC--eEEEEECCC
Confidence 7654332 35777887652 2222222222 2334444 4455554333333 588998873
No 164
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.38 E-value=1.1e-05 Score=80.54 Aligned_cols=188 Identities=12% Similarity=0.032 Sum_probs=110.1
Q ss_pred eEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHC----CcEEEEEcccCCCCCChhhhhccccccC
Q 004690 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR----GFIFAIAQIRGGGELGRQWYENGKFLKK 572 (736)
Q Consensus 497 ~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~RG~g~~g~~~~~~~~~~~~ 572 (736)
.+....++.|++. .+..++|++++.||-......+ -......|+.. .-+++.+|+----.....++ .
T Consensus 80 ~~~~~vv~lppgy-~~~~k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-------~ 150 (299)
T COG2382 80 SERRRVVYLPPGY-NPLEKYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-------C 150 (299)
T ss_pred cceeEEEEeCCCC-CccccccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-------c
Confidence 3455667888887 6678899999999843322221 22334456654 46677777631110011111 1
Q ss_pred cChHHHHHH-----HHHHHHHcCC--CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCC-CCCCc
Q 004690 573 KNTFTDFIA-----CAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP-TIPLT 644 (736)
Q Consensus 573 ~~~~~D~~~-----~~~~l~~~~~--~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~-~~p~~ 644 (736)
. +++.. .+=++.+... -++++-+++|.|+||+.++.++.++|+.|..+++.+|.++..-....+ .....
T Consensus 151 n---~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~ 227 (299)
T COG2382 151 N---EAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAE 227 (299)
T ss_pred c---HHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhh
Confidence 1 22222 2223333322 356788999999999999999999999999999999987753211000 00000
Q ss_pred -ccccc-ccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCC
Q 004690 645 -TAEWE-VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 703 (736)
Q Consensus 645 -~~~~~-i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 703 (736)
...+. +..... -++...+..+...++. +.+++.|+..+.+. .+..++| ||-.
T Consensus 228 ~l~~~~a~~~~~~-~~l~~g~~~~~~~~pN--r~L~~~L~~~g~~~---~yre~~G-gHdw 281 (299)
T COG2382 228 SLKILHAIGTDER-IVLTTGGEEGDFLRPN--RALAAQLEKKGIPY---YYREYPG-GHDW 281 (299)
T ss_pred hhhhhhccCccce-EEeecCCccccccchh--HHHHHHHHhcCCcc---eeeecCC-CCch
Confidence 00111 111122 3666666666666655 67899999998776 4555555 9943
No 165
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.38 E-value=8.9e-06 Score=82.72 Aligned_cols=195 Identities=13% Similarity=0.129 Sum_probs=109.6
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc---cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~---~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
..+..+.||||.++|. ..+-+| .+++||+.+|+.+.. ......++.+|.||| +++- ...+ ..++.+
T Consensus 270 ~~V~yi~wSPDdryLl---aCg~~e--~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~-Gs~d----r~i~~w 339 (519)
T KOG0293|consen 270 QPVSYIMWSPDDRYLL---ACGFDE--VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVT-GSPD----RTIIMW 339 (519)
T ss_pred CceEEEEECCCCCeEE---ecCchH--heeeccCCcchhhhhcccCcCCCcceeEEccCCceeEe-cCCC----CcEEEe
Confidence 4578899999999874 222222 399999999997754 112235668999999 6543 3222 357777
Q ss_pred EcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eEEEeeeCCEEEE
Q 004690 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFI 345 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~ 345 (736)
++++.. .--+++....-..+++.++||++++.... ..++.+++.++.. -+.+......+ ...+|.||+. +
T Consensus 340 dlDgn~---~~~W~gvr~~~v~dlait~Dgk~vl~v~~---d~~i~l~~~e~~~-dr~lise~~~its~~iS~d~k~--~ 410 (519)
T KOG0293|consen 340 DLDGNI---LGNWEGVRDPKVHDLAITYDGKYVLLVTV---DKKIRLYNREARV-DRGLISEEQPITSFSISKDGKL--A 410 (519)
T ss_pred cCCcch---hhcccccccceeEEEEEcCCCcEEEEEec---ccceeeechhhhh-hhccccccCceeEEEEcCCCcE--E
Confidence 777642 22233333233457889999999987653 3467777777644 22133322333 3457777663 3
Q ss_pred EEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeC--CEEEEEEEeCCeeEEEEEEcCC
Q 004690 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 346 ~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
+.|-. +..+...|++.....+....+.....+-.-.+.+ +.++.+.++++ ++++|....
T Consensus 411 LvnL~---~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~--kvyIWhr~s 471 (519)
T KOG0293|consen 411 LVNLQ---DQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDS--KVYIWHRIS 471 (519)
T ss_pred EEEcc---cCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCc--eEEEEEccC
Confidence 33433 2356666765321111122232222222222222 35566666665 588998763
No 166
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.36 E-value=1.3e-05 Score=82.22 Aligned_cols=112 Identities=20% Similarity=0.184 Sum_probs=72.8
Q ss_pred CCcEEEEecCCCCcCCCCCCc-----hhHHHHHHCC-------cEEEEEcccCCC-C-CChh-hhhccc---cccCcChH
Q 004690 515 SDPLLLYGYGSYEICNDPAFN-----SSRLSLLDRG-------FIFAIAQIRGGG-E-LGRQ-WYENGK---FLKKKNTF 576 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~-----~~~~~l~~~G-------~~v~~~d~RG~g-~-~g~~-~~~~~~---~~~~~~~~ 576 (736)
...+||+.||-.|.+...... ..+..|..-| |-|++.|.-|+. + .|.. ....|+ ......++
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 456899999966533221100 1233444434 889999999865 2 2221 111111 12234688
Q ss_pred HHHHHHHHHHHHcCCCCCCcEE-EEEeChHHHHHHHHHHhCCCceeEEEEcCC
Q 004690 577 TDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~-~~G~S~GG~la~~~~~~~p~~~~a~v~~~p 628 (736)
.|.+.+-+.|++.-.+ ++++ ++|.||||+.++..+..+||.+..+|..+.
T Consensus 130 ~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 130 RDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 9999998888776444 4565 999999999999999999998877666554
No 167
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.34 E-value=1.7e-05 Score=84.34 Aligned_cols=143 Identities=21% Similarity=0.280 Sum_probs=101.6
Q ss_pred CCCCceEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCC----chhHHHHHHCCcEEEEEcccC
Q 004690 480 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF----NSSRLSLLDRGFIFAIAQIRG 555 (736)
Q Consensus 480 ~~~~~~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~----~~~~~~l~~~G~~v~~~d~RG 555 (736)
...+|.+|...+++.||--+... -.|... +++|+|++.||-..++..+-- ...+-.|+++||.|-.-|.||
T Consensus 42 ~~~gy~~E~h~V~T~DgYiL~lh-RIp~~~----~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG 116 (403)
T KOG2624|consen 42 EKYGYPVEEHEVTTEDGYILTLH-RIPRGK----KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG 116 (403)
T ss_pred HHcCCceEEEEEEccCCeEEEEe-eecCCC----CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC
Confidence 44578889999999999844333 333331 688999999997666544321 233457899999999999999
Q ss_pred CCCCChhhhhccc--------cccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC---ceeEEE
Q 004690 556 GGELGRQWYENGK--------FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAV 624 (736)
Q Consensus 556 ~g~~g~~~~~~~~--------~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~---~~~a~v 624 (736)
..+.+.--.... ..+..-...|+-|.++++.+. +..+++..+|||.|+.....++..+|+ .++.++
T Consensus 117 -n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~ 193 (403)
T KOG2624|consen 117 -NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK--TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFI 193 (403)
T ss_pred -cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh--ccccceEEEEEEccchhheehhcccchhhhhhheee
Confidence 444432211111 111123457999999999875 356899999999999999998888876 577888
Q ss_pred EcCCcc
Q 004690 625 AAVPFV 630 (736)
Q Consensus 625 ~~~p~~ 630 (736)
+.+|.+
T Consensus 194 aLAP~~ 199 (403)
T KOG2624|consen 194 ALAPAA 199 (403)
T ss_pred eecchh
Confidence 888866
No 168
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.32 E-value=3.9e-05 Score=75.73 Aligned_cols=44 Identities=27% Similarity=0.274 Sum_probs=39.2
Q ss_pred HcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccc
Q 004690 588 KNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 631 (736)
Q Consensus 588 ~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d 631 (736)
++.-+++++.+|+|||+||++++.++..+|+.|...++.+|-+=
T Consensus 130 ~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 130 ARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred cccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 33558899999999999999999999999999999999999543
No 169
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.28 E-value=0.00095 Score=73.48 Aligned_cols=247 Identities=16% Similarity=0.143 Sum_probs=142.3
Q ss_pred EeCCEEEEEEecCCCeeEEEEEEeccCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCeEEEeeEEECCCCCEEEEE
Q 004690 129 RQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYA 208 (736)
Q Consensus 129 ~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~ 208 (736)
+.|.++-|.-..+|.+...++-+.... + +.+-|. +. ....+.+.|++||+.+.|+
T Consensus 133 pdg~~la~~~s~~G~e~~~l~v~Dl~t------------------g-~~l~d~--i~----~~~~~~~~W~~d~~~~~y~ 187 (414)
T PF02897_consen 133 PDGKRLAYSLSDGGSEWYTLRVFDLET------------------G-KFLPDG--IE----NPKFSSVSWSDDGKGFFYT 187 (414)
T ss_dssp TTSSEEEEEEEETTSSEEEEEEEETTT------------------T-EEEEEE--EE----EEESEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEecCCCCceEEEEEEECCC------------------C-cCcCCc--cc----ccccceEEEeCCCCEEEEE
Confidence 567777777777777655443333311 1 333221 11 1112238999999999999
Q ss_pred EeCCCCc------EEEEEEEECCCCCeecc---cc--cCc-cceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCC---C
Q 004690 209 EDTKGDE------IYTVYVIDIETGTPVGK---PL--VGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD---Q 272 (736)
Q Consensus 209 ~~~~G~e------~~~l~v~dl~tg~~~~~---~~--~~~-~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~---~ 272 (736)
....... ..+|+.+.+.++..... .. ... ...+.+|+|+ .++........ ...+|++++... .
T Consensus 188 ~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~-~s~v~~~d~~~~~~~~ 266 (414)
T PF02897_consen 188 RFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTS-ESEVYLLDLDDGGSPD 266 (414)
T ss_dssp ECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSS-EEEEEEEECCCTTTSS
T ss_pred EeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEcccc-CCeEEEEeccccCCCc
Confidence 8766555 78999999988754311 11 122 3457889999 45554544333 478999999874 2
Q ss_pred CCcEEEEeecCCceEEEEEEcCCccEEEEEecC-cceeEEEEEeCCCCC--ceE-Eeecccccee-EEEeeeCCEEEEEE
Q 004690 273 SNDICLYHEKDDIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPE--ELR-VLTPRVVGVD-TAASHRGNHFFITR 347 (736)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~-~~~~~l~~~dl~~~~--~~~-~l~~~~~~~~-~~~s~dg~~l~~~t 347 (736)
.+...+....+.... .+... |..+++.++. .....|+.+++++.. .+. .+.+...+.. -.++..+++|++..
T Consensus 267 ~~~~~l~~~~~~~~~-~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~ 343 (414)
T PF02897_consen 267 AKPKLLSPREDGVEY-YVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSY 343 (414)
T ss_dssp -SEEEEEESSSS-EE-EEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEE
T ss_pred CCcEEEeCCCCceEE-EEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEE
Confidence 334445443333222 22222 6666666654 455789999998876 234 5555555433 34778899999998
Q ss_pred cCCCCCCcEEEEEeCC-CCCceeeEecCCCCceeeeEE--EeCCEEEEEEEeCCee-EEEEEEcC
Q 004690 348 RSDELFNSELLACPVD-NTSETTVLIPHRESVKLQDIQ--LFIDHLAVYEREGGLQ-KITTYRLP 408 (736)
Q Consensus 348 ~~~~~~~~~l~~~~~~-~~~~~~~l~~~~~~~~i~~~~--~~~~~l~~~~~~~g~~-~l~v~~l~ 408 (736)
+.++ ..+|.++++. + .....++......+.++. ...+.+.+.+..-..| .++.+++.
T Consensus 344 ~~~~--~~~l~v~~~~~~--~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~ 404 (414)
T PF02897_consen 344 RENG--SSRLRVYDLDDG--KESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLA 404 (414)
T ss_dssp EETT--EEEEEEEETT-T--EEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETT
T ss_pred EECC--ccEEEEEECCCC--cEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 8874 6789999987 4 222222222223333443 4456787777766655 55666665
No 170
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.25 E-value=2.4e-06 Score=84.33 Aligned_cols=169 Identities=18% Similarity=0.139 Sum_probs=77.9
Q ss_pred CCcEEEEecCCCCcCCC--CCCchhHHHHHHCCcEEEEEcccC-----C---------------CCCChhhhhccccccC
Q 004690 515 SDPLLLYGYGSYEICND--PAFNSSRLSLLDRGFIFAIAQIRG-----G---------------GELGRQWYENGKFLKK 572 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~d~RG-----~---------------g~~g~~~~~~~~~~~~ 572 (736)
+.+-||.+||...+..- .........|.+.++-++.+|-+- . .+....|......
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~--- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD--- 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S----
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC---
Confidence 35789999994433221 111222334444378888877531 1 0112234332221
Q ss_pred cChHHHHHHHHHHHH----HcCCCCCCcEEEEEeChHHHHHHHHHHh----C----CCceeEEEEcCCccchhhhccCCC
Q 004690 573 KNTFTDFIACAEYLI----KNCYCTKEKLCIEGRSAGGLLIGAVLNM----R----PDLFKAAVAAVPFVDVLTTMLDPT 640 (736)
Q Consensus 573 ~~~~~D~~~~~~~l~----~~~~~d~~ri~~~G~S~GG~la~~~~~~----~----p~~~~a~v~~~p~~d~~~~~~~~~ 640 (736)
.....++..++++|. ++|. -.+|+|+|.||.+|+.++.. . ...|+.+|+.+++.-....... .
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~-~ 154 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQE-L 154 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTT-T
T ss_pred cccccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhh-h
Confidence 223445555555543 4443 36999999999999877753 1 2247899988886543211110 0
Q ss_pred CCCccccccccccccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCC
Q 004690 641 IPLTTAEWEVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG 706 (736)
Q Consensus 641 ~p~~~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~ 706 (736)
. .......|+|-++|.+|+.++++.++++++..... .+. +.. ++||.....
T Consensus 155 ~--------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v-~~h---~gGH~vP~~ 205 (212)
T PF03959_consen 155 Y--------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARV-IEH---DGGHHVPRK 205 (212)
T ss_dssp T----------TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEE-EEE---SSSSS----
T ss_pred h--------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEE-EEE---CCCCcCcCC
Confidence 0 01123567999999999999999999999988764 222 333 789987543
No 171
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.25 E-value=0.00096 Score=70.96 Aligned_cols=203 Identities=12% Similarity=0.101 Sum_probs=102.0
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECC-CCCeecc---cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-TGTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~-tg~~~~~---~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
..+.+||||++|+.+.... ..|.+++++ +|..... ...+....++++|||+++|+.... ...|..+++.
T Consensus 38 ~~l~~spd~~~lyv~~~~~----~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~---~~~v~v~~~~ 110 (330)
T PRK11028 38 QPMVISPDKRHLYVGVRPE----FRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYN---ANCVSVSPLD 110 (330)
T ss_pred ccEEECCCCCEEEEEECCC----CcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcC---CCeEEEEEEC
Confidence 4568999999886654322 346666665 4543221 222234568999999766766532 2356667775
Q ss_pred CCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceE-------EeeccccceeEEEeeeCCE
Q 004690 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR-------VLTPRVVGVDTAASHRGNH 342 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~-------~l~~~~~~~~~~~s~dg~~ 342 (736)
++......+........-..+.++|||+++++.... ...|+++|+++...+. .+.....-....++|+|++
T Consensus 111 ~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~--~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~ 188 (330)
T PRK11028 111 KDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLK--EDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQY 188 (330)
T ss_pred CCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCC--CCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCE
Confidence 432111111111111112245689999999875543 3356777775522121 1111111112358899998
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCC-Cceee---E--ecCC--CCceeeeEE--EeCCEEEEEEEeCCeeEEEEEEcCCCC
Q 004690 343 FFITRRSDELFNSELLACPVDNT-SETTV---L--IPHR--ESVKLQDIQ--LFIDHLAVYEREGGLQKITTYRLPAVG 411 (736)
Q Consensus 343 l~~~t~~~~~~~~~l~~~~~~~~-~~~~~---l--~~~~--~~~~i~~~~--~~~~~l~~~~~~~g~~~l~v~~l~~~g 411 (736)
+|+....+ ..|..++++.. +..+. + ++.. ......++. ++++++|+. ..+...|.+++++.++
T Consensus 189 lyv~~~~~----~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~--~~~~~~I~v~~i~~~~ 261 (330)
T PRK11028 189 AYCVNELN----SSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC--DRTASLISVFSVSEDG 261 (330)
T ss_pred EEEEecCC----CEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe--cCCCCeEEEEEEeCCC
Confidence 77764432 34555555421 11111 1 1111 011112333 444555554 3344568888886544
No 172
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.24 E-value=0.00063 Score=71.12 Aligned_cols=160 Identities=12% Similarity=0.156 Sum_probs=91.5
Q ss_pred EEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCc-cceeEEeeC--C-eEEEEEeCC--------------
Q 004690 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-TASVEWAGN--E-ALVYITMDE-------------- 256 (736)
Q Consensus 196 ~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~-~~~~~WspD--g-~l~y~~~~~-------------- 256 (736)
..+||+.+.|.|..+. .+|+.+|++|++...+ .++.. .+...|+.+ + .++.+...+
T Consensus 86 ~~~s~~~~~~~Yv~~~-----~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e 160 (386)
T PF14583_consen 86 GFLSPDDRALYYVKNG-----RSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFRE 160 (386)
T ss_dssp -EE-TTSSEEEEEETT-----TEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHH
T ss_pred eEEecCCCeEEEEECC-----CeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHH
Confidence 5789999999997642 3689999999987655 45443 445788644 3 454544321
Q ss_pred ---CCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCC-ccEEEEEecC---cceeEEEEEeCCCCCceEEeeccc
Q 004690 257 ---ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES-KKFLFIASES---KITRFVFYLDVSKPEELRVLTPRV 329 (736)
Q Consensus 257 ---~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~D-g~~l~~~~~~---~~~~~l~~~dl~~~~~~~~l~~~~ 329 (736)
..-+.+|+.+++.++ +...++++. .+...+.+||. ...|.|.-.. .-..+||.++.+++. .+++.++.
T Consensus 161 ~~~a~p~~~i~~idl~tG--~~~~v~~~~--~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~-~~~v~~~~ 235 (386)
T PF14583_consen 161 FYEARPHCRIFTIDLKTG--ERKVVFEDT--DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN-VKKVHRRM 235 (386)
T ss_dssp HHHC---EEEEEEETTT----EEEEEEES--S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS---
T ss_pred HHhhCCCceEEEEECCCC--ceeEEEecC--ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc-ceeeecCC
Confidence 122568999999987 567788765 34445667775 4555553322 224689999998876 67776655
Q ss_pred ccee---EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCC
Q 004690 330 VGVD---TAASHRGNHFFITRRSDELFNSELLACPVDNT 365 (736)
Q Consensus 330 ~~~~---~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~ 365 (736)
.+.. -.|.+||..|++.....+...+.|+.+++++.
T Consensus 236 ~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~ 274 (386)
T PF14583_consen 236 EGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTG 274 (386)
T ss_dssp TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT-
T ss_pred CCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCC
Confidence 4432 24999999999887654455678889998864
No 173
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.24 E-value=6.8e-06 Score=94.04 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=68.3
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChh--hh-----hcc---c---------cccCcCh
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ--WY-----ENG---K---------FLKKKNT 575 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~--~~-----~~~---~---------~~~~~~~ 575 (736)
..|+||++||..+... .|...+..|+++||.|+++|+||+|+.... .. ... . +.+-+..
T Consensus 448 g~P~VVllHG~~g~~~--~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE--NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCHH--HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 4689999999665543 366777788999999999999999976322 00 000 0 0122345
Q ss_pred HHHHHHHHHHHH------Hc----CCCCCCcEEEEEeChHHHHHHHHHHh
Q 004690 576 FTDFIACAEYLI------KN----CYCTKEKLCIEGRSAGGLLIGAVLNM 615 (736)
Q Consensus 576 ~~D~~~~~~~l~------~~----~~~d~~ri~~~G~S~GG~la~~~~~~ 615 (736)
+.|+......|. .. +..+..++.++||||||.++..++..
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 677777777766 11 12456799999999999999887764
No 174
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.23 E-value=8.1e-06 Score=81.46 Aligned_cols=135 Identities=20% Similarity=0.178 Sum_probs=96.3
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhc
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
++.++.+.||.+|....+-.... ..+...-+||..-|.-|--. ...+..=++.||.|+-.|.+|.+|+-.--+
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n-~~~ngq~LvIC~EGNAGFYE----vG~m~tP~~lgYsvLGwNhPGFagSTG~P~-- 287 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPN-QSGNGQDLVICFEGNAGFYE----VGVMNTPAQLGYSVLGWNHPGFAGSTGLPY-- 287 (517)
T ss_pred eEEEEeecCCcchhheeecCCCC-CCCCCceEEEEecCCccceE----eeeecChHHhCceeeccCCCCccccCCCCC--
Confidence 68889999999998765654433 22223457777776322110 011223357799999999999776543222
Q ss_pred cccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhh
Q 004690 567 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 634 (736)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~ 634 (736)
..++..-+.+++++.++.-...++.|.++|+|-||+-++++|..+|+ ++|+|+.+.|-|++.
T Consensus 288 -----p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllp 349 (517)
T KOG1553|consen 288 -----PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLP 349 (517)
T ss_pred -----cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhh
Confidence 23455667788899888755678899999999999999999999997 699999999888653
No 175
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.21 E-value=0.0019 Score=69.10 Aligned_cols=262 Identities=17% Similarity=0.164 Sum_probs=129.5
Q ss_pred EeeEEECCCCCEEEEEEeCC--CCcEEEEEEEECCCCCeecc-cc--cCc-cceeEEeeCCeEEEEEeCCCCCCceEEEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTK--GDEIYTVYVIDIETGTPVGK-PL--VGV-TASVEWAGNEALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~--G~e~~~l~v~dl~tg~~~~~-~~--~~~-~~~~~WspDg~l~y~~~~~~~~~~~v~~~ 266 (736)
-+.+.+||++++| |...+. .......+-++-++|+.... .. .+. ...++.+||++.+|++.-.. ..|..+
T Consensus 39 Ps~l~~~~~~~~L-Y~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~---g~v~v~ 114 (345)
T PF10282_consen 39 PSWLAVSPDGRRL-YVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGG---GSVSVF 114 (345)
T ss_dssp ECCEEE-TTSSEE-EEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTT---TEEEEE
T ss_pred CceEEEEeCCCEE-EEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccC---CeEEEE
Confidence 3456889999876 455543 23345556666665665443 22 222 23477889997667665322 246667
Q ss_pred EcCCCCCCcEE--EE--e--ecC-----CceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEE---e-ecccc
Q 004690 267 KLEADQSNDIC--LY--H--EKD-----DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRV---L-TPRVV 330 (736)
Q Consensus 267 ~l~t~~~~~~~--~~--~--~~~-----~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~---l-~~~~~ 330 (736)
++.....-... ++ + .++ ......+.++|||+++++..... ..|++++++... .+.. + .+...
T Consensus 115 ~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~--D~v~~~~~~~~~~~l~~~~~~~~~~G~ 192 (345)
T PF10282_consen 115 PLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA--DRVYVYDIDDDTGKLTPVDSIKVPPGS 192 (345)
T ss_dssp EECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT--TEEEEEEE-TTS-TEEEEEEEECSTTS
T ss_pred EccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC--CEEEEEEEeCCCceEEEeeccccccCC
Confidence 77653211111 11 1 111 12334578899999998765433 345555554432 1322 1 12222
Q ss_pred cee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCC-CCceee-----EecCCC--CceeeeEEEeCCEEEEEEEeCCeeE
Q 004690 331 GVD-TAASHRGNHFFITRRSDELFNSELLACPVDN-TSETTV-----LIPHRE--SVKLQDIQLFIDHLAVYEREGGLQK 401 (736)
Q Consensus 331 ~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~-~~~~~~-----l~~~~~--~~~i~~~~~~~~~l~~~~~~~g~~~ 401 (736)
+-. ..++++|+++|++.... ..|..++++. .+..+. .++... .....++.+..|+-+++....+...
T Consensus 193 GPRh~~f~pdg~~~Yv~~e~s----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~s 268 (345)
T PF10282_consen 193 GPRHLAFSPDGKYAYVVNELS----NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNS 268 (345)
T ss_dssp SEEEEEE-TTSSEEEEEETTT----TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTE
T ss_pred CCcEEEEcCCcCEEEEecCCC----CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCE
Confidence 322 45899999888876554 3455555441 122111 222211 1134566666554444445555667
Q ss_pred EEEEEcCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCcEEEE
Q 004690 402 ITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 470 (736)
Q Consensus 402 l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~ 470 (736)
|.+++++..++.++.+ ..+... +-.-..+..+++++.++++-..- .--.+|.+|.++|..+..
T Consensus 269 I~vf~~d~~~g~l~~~---~~~~~~--G~~Pr~~~~s~~g~~l~Va~~~s-~~v~vf~~d~~tG~l~~~ 331 (345)
T PF10282_consen 269 ISVFDLDPATGTLTLV---QTVPTG--GKFPRHFAFSPDGRYLYVANQDS-NTVSVFDIDPDTGKLTPV 331 (345)
T ss_dssp EEEEEECTTTTTEEEE---EEEEES--SSSEEEEEE-TTSSEEEEEETTT-TEEEEEEEETTTTEEEEE
T ss_pred EEEEEEecCCCceEEE---EEEeCC--CCCccEEEEeCCCCEEEEEecCC-CeEEEEEEeCCCCcEEEe
Confidence 9999996443333211 111110 00001234456676665544333 335677888888885443
No 176
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.20 E-value=2.2e-05 Score=79.19 Aligned_cols=100 Identities=19% Similarity=0.189 Sum_probs=64.5
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHC--CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (736)
.|.++++||..+.... |......+... .|.++.+|.||+|.+. .. ........+.+..+.+.-..
T Consensus 21 ~~~i~~~hg~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~g~g~s~----~~------~~~~~~~~~~~~~~~~~~~~- 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSV--WRPVFKVLPALAARYRVIAPDLRGHGRSD----PA------GYSLSAYADDLAALLDALGL- 87 (282)
T ss_pred CCeEEEeCCCCCchhh--hHHHHHHhhccccceEEEEecccCCCCCC----cc------cccHHHHHHHHHHHHHHhCC-
Confidence 4589999997765443 22222222222 1999999999988765 00 11112223333333332222
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 594 ~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
.++.++|||+||.++..++.++|+.++++|+..+.
T Consensus 88 -~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 88 -EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred -CceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 34999999999999999999999999998887754
No 177
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.18 E-value=3.7e-05 Score=70.36 Aligned_cols=119 Identities=18% Similarity=0.207 Sum_probs=77.5
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCCCCCCccccccccc
Q 004690 573 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKA 652 (736)
Q Consensus 573 ~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~ 652 (736)
...++|-++.++--+..- ++.+.+++||.|+.+++..+.+....++++++.+|+- ..+.+..+..-.+...+...+
T Consensus 40 ~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd-~~~~~~~~~~~~tf~~~p~~~ 115 (181)
T COG3545 40 APVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPD-VSRPEIRPKHLMTFDPIPREP 115 (181)
T ss_pred CCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCC-ccccccchhhccccCCCcccc
Confidence 445678887777665542 4569999999999999999887666789999888852 211111100000001111223
Q ss_pred cccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCC
Q 004690 653 QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 704 (736)
Q Consensus 653 ~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~ 704 (736)
...| .+++++.+|+.|+++++..+++++-.. ++.. ..+||...
T Consensus 116 lpfp-s~vvaSrnDp~~~~~~a~~~a~~wgs~-----lv~~---g~~GHiN~ 158 (181)
T COG3545 116 LPFP-SVVVASRNDPYVSYEHAEDLANAWGSA-----LVDV---GEGGHINA 158 (181)
T ss_pred CCCc-eeEEEecCCCCCCHHHHHHHHHhccHh-----heec---ccccccch
Confidence 3445 899999999999999999999887543 3333 36778653
No 178
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.18 E-value=0.00012 Score=76.83 Aligned_cols=147 Identities=14% Similarity=0.127 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHcCCCCCC--cEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchh-hhccCC-------------
Q 004690 576 FTDFIACAEYLIKNCYCTKE--KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-TTMLDP------------- 639 (736)
Q Consensus 576 ~~D~~~~~~~l~~~~~~d~~--ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~-~~~~~~------------- 639 (736)
.-|.+.|+.+|++.-....+ ++.++|+|.||+|+..++.-.|.+|.+++-.++.+-.. ++....
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~ 242 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEF 242 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccc
Confidence 46888888888876333333 89999999999999999999999999999877654321 111000
Q ss_pred ------------CCCCcccc-----cc----------------cccc--ccccEEEeecCCCCCCCChHHHHHHHHHHhc
Q 004690 640 ------------TIPLTTAE-----WE----------------VKAQ--NYPHILVTAGLNDPRVMYSEPAKFVAKLREM 684 (736)
Q Consensus 640 ------------~~p~~~~~-----~~----------------i~~~--~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~ 684 (736)
...|+... +. +.+. ..|-.+..|+..|+.+|+++-.+++..+++.
T Consensus 243 ~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~l 322 (403)
T PF11144_consen 243 FNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNL 322 (403)
T ss_pred cccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHc
Confidence 00111111 00 1111 2354566799999999999999999999999
Q ss_pred CCCCCeEEEEecC--------CCCcCCCCChHHHHHHHHHHHHHHHHhc
Q 004690 685 KTDDNILLFKCEL--------GAGHFSKSGRFERLREAAFTYTFLMRAL 725 (736)
Q Consensus 685 ~~~~~~~~~~~~~--------~~gH~~~~~~~~~~~~~a~~~~fl~~~l 725 (736)
|-++++++++.+. +-.|+.+.+....++. .+.-+.+.+
T Consensus 323 gfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~K---eLp~~lek~ 368 (403)
T PF11144_consen 323 GFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKK---ELPLMLEKL 368 (403)
T ss_pred CCCeEEEEecChhhccchheeccccCCCCCHHHHHHH---HhHHHHHHh
Confidence 9999888883211 4568776655444433 344444444
No 179
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.18 E-value=0.002 Score=65.33 Aligned_cols=202 Identities=15% Similarity=0.166 Sum_probs=115.7
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEe-eCCeEEEEEeCCCCCCceEEEEEcCCCCC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWA-GNEALVYITMDEILRPDKAWLHKLEADQS 273 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~Ws-pDg~l~y~~~~~~~~~~~v~~~~l~t~~~ 273 (736)
++.|.++...|.|+ +..+ .+|+.+|+++++......+.. .++... +||.+++.... .+.+.++.++
T Consensus 4 gp~~d~~~g~l~~~-D~~~---~~i~~~~~~~~~~~~~~~~~~-~G~~~~~~~g~l~v~~~~------~~~~~d~~~g-- 70 (246)
T PF08450_consen 4 GPVWDPRDGRLYWV-DIPG---GRIYRVDPDTGEVEVIDLPGP-NGMAFDRPDGRLYVADSG------GIAVVDPDTG-- 70 (246)
T ss_dssp EEEEETTTTEEEEE-ETTT---TEEEEEETTTTEEEEEESSSE-EEEEEECTTSEEEEEETT------CEEEEETTTT--
T ss_pred ceEEECCCCEEEEE-EcCC---CEEEEEECCCCeEEEEecCCC-ceEEEEccCCEEEEEEcC------ceEEEecCCC--
Confidence 57888866666555 4333 269999999988765444443 346666 66677665432 2444477766
Q ss_pred CcEEEEeec-C--C-ceEEEEEEcCCccEEEEEecCcc----e--eEEEEEeCCCCCceEEeecccccee-EEEeeeCCE
Q 004690 274 NDICLYHEK-D--D-IYSLGLQASESKKFLFIASESKI----T--RFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNH 342 (736)
Q Consensus 274 ~~~~~~~~~-~--~-~~~~~~~~S~Dg~~l~~~~~~~~----~--~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~ 342 (736)
+...+.... . + ...-++.+++||+ |+++..... . ..||+++.+ ++ .+.+........ ..|+++|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~-~~~~~~~~~~pNGi~~s~dg~~ 147 (246)
T PF08450_consen 71 KVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GK-VTVVADGLGFPNGIAFSPDGKT 147 (246)
T ss_dssp EEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE-EEEEEEEESSEEEEEEETTSSE
T ss_pred cEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-Ce-EEEEecCcccccceEECCcchh
Confidence 333444432 1 1 2334688999999 666653321 1 679999998 54 444443322222 348999998
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCCCc----eeeEecCCCC-ceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCCCCCcccc
Q 004690 343 FFITRRSDELFNSELLACPVDNTSE----TTVLIPHRES-VKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKS 416 (736)
Q Consensus 343 l~~~t~~~~~~~~~l~~~~~~~~~~----~~~l~~~~~~-~~i~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~~g~~~~~ 416 (736)
||+.-.. +.+|++++++.... .+.++..... ....++.++.+ .|++..... .+|.+++.+ |+.+
T Consensus 148 lyv~ds~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~--~~I~~~~p~--G~~~-- 217 (246)
T PF08450_consen 148 LYVADSF----NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGG--GRIVVFDPD--GKLL-- 217 (246)
T ss_dssp EEEEETT----TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETT--TEEEEEETT--SCEE--
T ss_pred eeecccc----cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCC--CEEEEECCC--ccEE--
Confidence 8886443 46799998864322 1223332222 24778888875 555554433 357777765 6532
Q ss_pred ccCCceeeec
Q 004690 417 LQGGKSVEFI 426 (736)
Q Consensus 417 l~~~~~i~~p 426 (736)
..|.+|
T Consensus 218 ----~~i~~p 223 (246)
T PF08450_consen 218 ----REIELP 223 (246)
T ss_dssp ----EEEE-S
T ss_pred ----EEEcCC
Confidence 446666
No 180
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.13 E-value=0.0006 Score=72.89 Aligned_cols=202 Identities=16% Similarity=0.205 Sum_probs=101.0
Q ss_pred EEECCCCCEEEEEEeCCCCcEEEEEEEECCC-CCeecc--cc------------cC-ccceeEEeeCCeEEEEEeCCCCC
Q 004690 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGK--PL------------VG-VTASVEWAGNEALVYITMDEILR 259 (736)
Q Consensus 196 ~~~SPDG~~la~~~~~~G~e~~~l~v~dl~t-g~~~~~--~~------------~~-~~~~~~WspDg~l~y~~~~~~~~ 259 (736)
+.++|||++|..+--.+| .+.+++++. |..... .. .. ....+.++|||+.+|+..-..
T Consensus 92 i~~~~~g~~l~vany~~g----~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~-- 165 (345)
T PF10282_consen 92 IAVDPDGRFLYVANYGGG----SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA-- 165 (345)
T ss_dssp EEECTTSSEEEEEETTTT----EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT--
T ss_pred EEEecCCCEEEEEEccCC----eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC--
Confidence 578999998866544344 466667665 443221 01 11 123589999997667765432
Q ss_pred CceEEEEEcCCCCCCcEE--EEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEE---eecc---cc-
Q 004690 260 PDKAWLHKLEADQSNDIC--LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---LTPR---VV- 330 (736)
Q Consensus 260 ~~~v~~~~l~t~~~~~~~--~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~---l~~~---~~- 330 (736)
.+|+.+++.....+-.. ...-+...---.+.++|||+++++.......-.+|.++..++. ++. +... ..
T Consensus 166 -D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~-~~~~~~~~~~~~~~~~ 243 (345)
T PF10282_consen 166 -DRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGS-LTEIQTISTLPEGFTG 243 (345)
T ss_dssp -TEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTE-EEEEEEEESCETTSCS
T ss_pred -CEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCc-eeEEEEeeeccccccc
Confidence 36888888765321111 1111111111146789999999887654444444555533554 222 1111 11
Q ss_pred ---ceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCC-Cceee--EecCCCCceeeeEEEeC--CEEEEEEEeCCeeEE
Q 004690 331 ---GVDTAASHRGNHFFITRRSDELFNSELLACPVDNT-SETTV--LIPHRESVKLQDIQLFI--DHLAVYEREGGLQKI 402 (736)
Q Consensus 331 ---~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~-~~~~~--l~~~~~~~~i~~~~~~~--~~l~~~~~~~g~~~l 402 (736)
.....++|||++||+. |+. . ..|..++++.. +..+. .++.. .....++.++. ++|++.. .....|
T Consensus 244 ~~~~~~i~ispdg~~lyvs-nr~-~--~sI~vf~~d~~~g~l~~~~~~~~~-G~~Pr~~~~s~~g~~l~Va~--~~s~~v 316 (345)
T PF10282_consen 244 ENAPAEIAISPDGRFLYVS-NRG-S--NSISVFDLDPATGTLTLVQTVPTG-GKFPRHFAFSPDGRYLYVAN--QDSNTV 316 (345)
T ss_dssp SSSEEEEEE-TTSSEEEEE-ECT-T--TEEEEEEECTTTTTEEEEEEEEES-SSSEEEEEE-TTSSEEEEEE--TTTTEE
T ss_pred cCCceeEEEecCCCEEEEE-ecc-C--CEEEEEEEecCCCceEEEEEEeCC-CCCccEEEEeCCCCEEEEEe--cCCCeE
Confidence 1234589999977665 544 2 34545554221 22222 23322 22356776644 4555443 333458
Q ss_pred EEEEcCCCCC
Q 004690 403 TTYRLPAVGE 412 (736)
Q Consensus 403 ~v~~l~~~g~ 412 (736)
.+++++..++
T Consensus 317 ~vf~~d~~tG 326 (345)
T PF10282_consen 317 SVFDIDPDTG 326 (345)
T ss_dssp EEEEEETTTT
T ss_pred EEEEEeCCCC
Confidence 8888875444
No 181
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.13 E-value=0.00047 Score=72.70 Aligned_cols=193 Identities=18% Similarity=0.235 Sum_probs=114.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-c----ccCccceeEEeeCC-eEEEEEeCCCCCCceEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P----LVGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~----~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~ 265 (736)
.+..+++||||++.|-+.. .-.++++|=.+|+.+.. . -.+....++||||+ +|+-.+.|.. .+|
T Consensus 192 FV~~VRysPDG~~Fat~gs-----Dgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt---~KI-- 261 (603)
T KOG0318|consen 192 FVNCVRYSPDGSRFATAGS-----DGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKT---IKI-- 261 (603)
T ss_pred ceeeEEECCCCCeEEEecC-----CccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCce---EEE--
Confidence 4788999999999885433 24699999999998752 1 12223458999999 7776665542 334
Q ss_pred EEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEE
Q 004690 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFF 344 (736)
Q Consensus 266 ~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~ 344 (736)
+++.+..-..+.+....-....+++-|..| .|+-.+.+ +. |-+++.+++..++.+..+..++. ..++++|++||
T Consensus 262 WdVs~~slv~t~~~~~~v~dqqvG~lWqkd--~lItVSl~-G~--in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~ 336 (603)
T KOG0318|consen 262 WDVSTNSLVSTWPMGSTVEDQQVGCLWQKD--HLITVSLS-GT--INYLNPSDPSVLKVISGHNKSITALTVSPDGKTIY 336 (603)
T ss_pred EEeeccceEEEeecCCchhceEEEEEEeCC--eEEEEEcC-cE--EEEecccCCChhheecccccceeEEEEcCCCCEEE
Confidence 455555222233333333355677888844 33332222 22 34556665552444445544554 34889887665
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeC-CEEEEEEEeCCeeEEEEEEcC
Q 004690 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g~~~l~v~~l~ 408 (736)
-.+. + +.|...+... +....+.+......+..+...+ +.++-...++. |++.++.
T Consensus 337 Sgsy-D----G~I~~W~~~~-g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~---l~~~~~~ 392 (603)
T KOG0318|consen 337 SGSY-D----GHINSWDSGS-GTSDRLAGKGHTNQIKGMAASESGELFTIGWDDT---LRVISLK 392 (603)
T ss_pred eecc-C----ceEEEEecCC-ccccccccccccceEEEEeecCCCcEEEEecCCe---EEEEecc
Confidence 4433 2 4677777654 3333465555556777887776 66666666665 4555554
No 182
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.12 E-value=2.5e-05 Score=75.77 Aligned_cols=158 Identities=20% Similarity=0.154 Sum_probs=90.6
Q ss_pred CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCC-CCC-CcEEEEEeChHHHHHHHHHHhCC---Cc
Q 004690 545 GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY-CTK-EKLCIEGRSAGGLLIGAVLNMRP---DL 619 (736)
Q Consensus 545 G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-~d~-~ri~~~G~S~GG~la~~~~~~~p---~~ 619 (736)
-+.++.+.++|.+.. .+...++|+.+.++.|...-. ..+ ...++.||||||.+|..+|.+.- -.
T Consensus 33 ~iel~avqlPGR~~r-----------~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~ 101 (244)
T COG3208 33 DIELLAVQLPGRGDR-----------FGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLP 101 (244)
T ss_pred hhheeeecCCCcccc-----------cCCcccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCC
Confidence 478899999987642 112234678888887776533 222 47999999999999988876421 11
Q ss_pred eeEEE---EcCCccchhhh------------ccC-CCCCCc---ccccc------------------cc-c-cccccEEE
Q 004690 620 FKAAV---AAVPFVDVLTT------------MLD-PTIPLT---TAEWE------------------VK-A-QNYPHILV 660 (736)
Q Consensus 620 ~~a~v---~~~p~~d~~~~------------~~~-~~~p~~---~~~~~------------------i~-~-~~~ppvLi 660 (736)
..+.. +.+|..+.... +.+ .+.|.. ..|+. .. . ....|+.+
T Consensus 102 p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~ 181 (244)
T COG3208 102 PRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHA 181 (244)
T ss_pred cceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEE
Confidence 22222 23342221110 100 011100 00110 00 1 12345999
Q ss_pred eecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcC
Q 004690 661 TAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 726 (736)
Q Consensus 661 ~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~ 726 (736)
+.|++|..|..++...|.+. .+...++.++ .+||++..... ...++++.+.++
T Consensus 182 ~~G~~D~~vs~~~~~~W~~~---t~~~f~l~~f----dGgHFfl~~~~------~~v~~~i~~~l~ 234 (244)
T COG3208 182 FGGEKDHEVSRDELGAWREH---TKGDFTLRVF----DGGHFFLNQQR------EEVLARLEQHLA 234 (244)
T ss_pred eccCcchhccHHHHHHHHHh---hcCCceEEEe----cCcceehhhhH------HHHHHHHHHHhh
Confidence 99999999987766556544 3446677777 58999865432 235667777765
No 183
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.12 E-value=0.001 Score=69.95 Aligned_cols=193 Identities=13% Similarity=0.140 Sum_probs=103.1
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEE--------eeCCeEEEEEeCCCCCCceEEE
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEW--------AGNEALVYITMDEILRPDKAWL 265 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~W--------spDg~l~y~~~~~~~~~~~v~~ 265 (736)
.+.+|||||+|.+. +... ...+-|+|+++++.+.. ..+++..-+.+ +.||++++++.+..+. +..
T Consensus 109 ~~~ls~dgk~l~V~-n~~p--~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~---~~~ 182 (352)
T TIGR02658 109 MTSLTPDNKTLLFY-QFSP--SPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGN---PKI 182 (352)
T ss_pred eEEECCCCCEEEEe-cCCC--CCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCc---eEE
Confidence 67999999987643 3222 35799999999998763 44444332333 4566444444443332 111
Q ss_pred EEcCCCCCCcEEEEee-cCCceEEEEEEcC-CccEEEEEecCcceeEEEEEeCCCCC-----ceEEeecc-------ccc
Q 004690 266 HKLEADQSNDICLYHE-KDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPE-----ELRVLTPR-------VVG 331 (736)
Q Consensus 266 ~~l~t~~~~~~~~~~~-~~~~~~~~~~~S~-Dg~~l~~~~~~~~~~~l~~~dl~~~~-----~~~~l~~~-------~~~ 331 (736)
. ...+|.. .++- +..+.+++ ||++++++.. ..|+.+|+.+.+ .+..+... ..+
T Consensus 183 ~--------~~~vf~~~~~~v-~~rP~~~~~dg~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g 249 (352)
T TIGR02658 183 K--------PTEVFHPEDEYL-INHPAYSNKSGRLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGG 249 (352)
T ss_pred e--------eeeeecCCcccc-ccCCceEcCCCcEEEEecC----CeEEEEecCCCcceecceeeeccccccccccCCCc
Confidence 1 1122221 1111 11122345 8988877654 678999976643 12222211 122
Q ss_pred ee-EEEeeeCCEEEEEEcCCC-----CCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEE-EEEEEeCCeeEEEE
Q 004690 332 VD-TAASHRGNHFFITRRSDE-----LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHL-AVYEREGGLQKITT 404 (736)
Q Consensus 332 ~~-~~~s~dg~~l~~~t~~~~-----~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l-~~~~~~~g~~~l~v 404 (736)
.+ ..++++|+++|++.+... .+..+|..+|..+..... .++-+. ...++.++.|.- .++........+.+
T Consensus 250 ~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~-~i~vG~--~~~~iavS~Dgkp~lyvtn~~s~~VsV 326 (352)
T TIGR02658 250 WQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLR-KIELGH--EIDSINVSQDAKPLLYALSTGDKTLYI 326 (352)
T ss_pred ceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEE-EEeCCC--ceeeEEECCCCCeEEEEeCCCCCcEEE
Confidence 22 347889999999764321 223589999987632222 233222 344555555533 33333333445888
Q ss_pred EEcCC
Q 004690 405 YRLPA 409 (736)
Q Consensus 405 ~~l~~ 409 (736)
++...
T Consensus 327 iD~~t 331 (352)
T TIGR02658 327 FDAET 331 (352)
T ss_pred EECcC
Confidence 88763
No 184
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.12 E-value=0.00016 Score=75.02 Aligned_cols=124 Identities=11% Similarity=0.148 Sum_probs=88.4
Q ss_pred EEEEEECCCCCeecc--cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCC
Q 004690 218 TVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES 295 (736)
Q Consensus 218 ~l~v~dl~tg~~~~~--~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~D 295 (736)
.|-|+|.++|+.... .+.++. .+.-++||+.+.++.+ ..++|.+++.++ ...+.+........++.|+|+
T Consensus 383 ~l~iyd~~~~e~kr~e~~lg~I~-av~vs~dGK~~vvaNd----r~el~vididng---nv~~idkS~~~lItdf~~~~n 454 (668)
T COG4946 383 KLGIYDKDGGEVKRIEKDLGNIE-AVKVSPDGKKVVVAND----RFELWVIDIDNG---NVRLIDKSEYGLITDFDWHPN 454 (668)
T ss_pred eEEEEecCCceEEEeeCCccceE-EEEEcCCCcEEEEEcC----ceEEEEEEecCC---CeeEecccccceeEEEEEcCC
Confidence 577888888886553 233333 4888999965555543 357999999998 334444444566788999999
Q ss_pred ccEEEEEecCc-ceeEEEEEeCCCCCceEEeec-cccceeEEEeeeCCEEEEEEcCC
Q 004690 296 KKFLFIASESK-ITRFVFYLDVSKPEELRVLTP-RVVGVDTAASHRGNHFFITRRSD 350 (736)
Q Consensus 296 g~~l~~~~~~~-~~~~l~~~dl~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~t~~~ 350 (736)
++||++.--+. -+..|.+.|.++++ .-.++. ...+..+.++|||+.|||++++.
T Consensus 455 sr~iAYafP~gy~tq~Iklydm~~~K-iy~vTT~ta~DfsPaFD~d~ryLYfLs~Rs 510 (668)
T COG4946 455 SRWIAYAFPEGYYTQSIKLYDMDGGK-IYDVTTPTAYDFSPAFDPDGRYLYFLSARS 510 (668)
T ss_pred ceeEEEecCcceeeeeEEEEecCCCe-EEEecCCcccccCcccCCCCcEEEEEeccc
Confidence 99999876543 35678889999887 554543 33344456999999999999985
No 185
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.12 E-value=2.9e-05 Score=78.65 Aligned_cols=136 Identities=18% Similarity=0.211 Sum_probs=88.9
Q ss_pred eEEEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCC-----CCchhHHHHHH-CCcEEEEEcccCCCC
Q 004690 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-----AFNSSRLSLLD-RGFIFAIAQIRGGGE 558 (736)
Q Consensus 485 ~~~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~-----~~~~~~~~l~~-~G~~v~~~d~RG~g~ 558 (736)
..+++.+.. |+..|.+..+.-++. .+.-.||+.-|... .... ........+++ .|..|+.+||||-|.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a----~~~RWiL~s~GNg~-~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~ 184 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA----KPQRWILVSNGNGE-CYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS 184 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC----CCCcEEEEEcCChH-HhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc
Confidence 467888876 999998887654333 34456777766322 1111 12334556665 499999999999775
Q ss_pred CChhhhhccccccCcChHHHHHHHHHHHHHcC-CCCCCcEEEEEeChHHHHHHHHHHhCC----Ccee-EEEEcCCccch
Q 004690 559 LGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLNMRP----DLFK-AAVAAVPFVDV 632 (736)
Q Consensus 559 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~ri~~~G~S~GG~la~~~~~~~p----~~~~-a~v~~~p~~d~ 632 (736)
+-.. ....+-+.|..++++||.++. .+.+++|.+.|+|.||.+++.++.++. |-++ .+|-.-++.++
T Consensus 185 S~G~-------~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl 257 (365)
T PF05677_consen 185 STGP-------PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSL 257 (365)
T ss_pred CCCC-------CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchH
Confidence 4221 123456789999999999743 467899999999999999888766532 2223 24444555554
Q ss_pred h
Q 004690 633 L 633 (736)
Q Consensus 633 ~ 633 (736)
.
T Consensus 258 ~ 258 (365)
T PF05677_consen 258 A 258 (365)
T ss_pred H
Confidence 3
No 186
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.10 E-value=0.00012 Score=77.99 Aligned_cols=100 Identities=22% Similarity=0.257 Sum_probs=63.0
Q ss_pred CCCcEEEE----ecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHH---
Q 004690 514 GSDPLLLY----GYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL--- 586 (736)
Q Consensus 514 ~~~P~vl~----~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l--- 586 (736)
.+.|.||. +|| +|...-.. ....-.-+..|.-|..+-+.-..+-| .+++|+..+....
T Consensus 67 ~krP~vViDPRAGHG-pGIGGFK~-dSevG~AL~~GHPvYFV~F~p~P~pg-------------QTl~DV~~ae~~Fv~~ 131 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHG-PGIGGFKP-DSEVGVALRAGHPVYFVGFFPEPEPG-------------QTLEDVMRAEAAFVEE 131 (581)
T ss_pred CCCCeEEeCCCCCCC-CCccCCCc-ccHHHHHHHcCCCeEEEEecCCCCCC-------------CcHHHHHHHHHHHHHH
Confidence 45787776 577 44333222 23344445669888877765433333 3456766653332
Q ss_pred -HHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE-EcCCc
Q 004690 587 -IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV-AAVPF 629 (736)
Q Consensus 587 -~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v-~~~p~ 629 (736)
..... +..|..++|-|.||.+++.+|+.+|+++.-+| +.+|+
T Consensus 132 V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 132 VAERHP-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred HHHhCC-CCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 22222 33499999999999999999999999987555 44554
No 187
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.10 E-value=0.0025 Score=64.79 Aligned_cols=192 Identities=21% Similarity=0.210 Sum_probs=108.6
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-ccc-CccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~-~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
.+..+.|+|||++|++... ...++++|+.+++.... ... .....+.|+|++ .++....+ ..++.+++
T Consensus 11 ~i~~~~~~~~~~~l~~~~~-----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-----~~i~i~~~ 80 (289)
T cd00200 11 GVTCVAFSPDGKLLATGSG-----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSD-----KTIRLWDL 80 (289)
T ss_pred CEEEEEEcCCCCEEEEeec-----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCC-----CeEEEEEc
Confidence 4778899999999987764 23689999988764332 221 223468999999 45544332 35788888
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t 347 (736)
.++ +....+.... .....+.|+++++.++... ....|+++++.+++....+......+. ..+++++..++..
T Consensus 81 ~~~--~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~- 153 (289)
T cd00200 81 ETG--ECVRTLTGHT-SYVSSVAFSPDGRILSSSS---RDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASS- 153 (289)
T ss_pred Ccc--cceEEEeccC-CcEEEEEEcCCCCEEEEec---CCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEE-
Confidence 764 2333333222 2344678999977665543 234678888876541222322222233 3477776644433
Q ss_pred cCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCC--EEEEEEEeCCeeEEEEEEcCC
Q 004690 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 348 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~--~l~~~~~~~g~~~l~v~~l~~ 409 (736)
..+ ..|...++........+..+ ...+..+.+..+ .+++... ++ .+.+|++..
T Consensus 154 ~~~----~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~-~~--~i~i~d~~~ 208 (289)
T cd00200 154 SQD----GTIKLWDLRTGKCVATLTGH--TGEVNSVAFSPDGEKLLSSSS-DG--TIKLWDLST 208 (289)
T ss_pred cCC----CcEEEEEccccccceeEecC--ccccceEEECCCcCEEEEecC-CC--cEEEEECCC
Confidence 322 35667776542222222222 224556666665 4444433 43 477888863
No 188
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.09 E-value=0.0001 Score=71.51 Aligned_cols=101 Identities=11% Similarity=0.085 Sum_probs=64.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
+..++|||+|+.+|...... ...+.++|+++....... ......+.|||+| .++...... ....|..+++.+.
T Consensus 62 I~~~~WsP~g~~favi~g~~---~~~v~lyd~~~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n--~~G~l~~wd~~~~ 135 (194)
T PF08662_consen 62 IHDVAWSPNGNEFAVIYGSM---PAKVTLYDVKGKKIFSFG-TQPRNTISWSPDGRFLVLAGFGN--LNGDLEFWDVRKK 135 (194)
T ss_pred eEEEEECcCCCEEEEEEccC---CcccEEEcCcccEeEeec-CCCceEEEECCCCCEEEEEEccC--CCcEEEEEECCCC
Confidence 78899999999998775322 237889999743333221 2234569999999 555554432 2245777887643
Q ss_pred CCCcEEEEeecCCceEEEEEEcCCccEEEEEec
Q 004690 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASE 304 (736)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~ 304 (736)
..+...... ....+.|||||++++....
T Consensus 136 ----~~i~~~~~~-~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 136 ----KKISTFEHS-DATDVEWSPDGRYLATATT 163 (194)
T ss_pred ----EEeeccccC-cEEEEEEcCCCCEEEEEEe
Confidence 223322222 2457899999999987553
No 189
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=98.08 E-value=5.1e-05 Score=77.64 Aligned_cols=181 Identities=19% Similarity=0.092 Sum_probs=102.0
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-c--ccCccceeEEeeCCeEEEEEeCCCCCCceEEEEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~--~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~ 267 (736)
..++.++|.|+|++|+-+. -..+.++||+.++..+-. . ..+ ..+++|-+||.++-+..-+. -. .+++
T Consensus 262 ~RVs~VafHPsG~~L~Tas-----fD~tWRlWD~~tk~ElL~QEGHs~~-v~~iaf~~DGSL~~tGGlD~--~~--RvWD 331 (459)
T KOG0272|consen 262 ARVSRVAFHPSGKFLGTAS-----FDSTWRLWDLETKSELLLQEGHSKG-VFSIAFQPDGSLAATGGLDS--LG--RVWD 331 (459)
T ss_pred hhheeeeecCCCceeeecc-----cccchhhcccccchhhHhhcccccc-cceeEecCCCceeeccCccc--hh--heee
Confidence 6789999999999998443 346789999999886532 2 222 34599999998877654221 12 2447
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEE
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFIT 346 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~ 346 (736)
+.++ ..+..+++. -.-..+++|||+|-.|+- .+..++-.||-+.... .+-.+....+-+. .-++|.++.+++.
T Consensus 332 lRtg--r~im~L~gH-~k~I~~V~fsPNGy~lAT-gs~Dnt~kVWDLR~r~--~ly~ipAH~nlVS~Vk~~p~~g~fL~T 405 (459)
T KOG0272|consen 332 LRTG--RCIMFLAGH-IKEILSVAFSPNGYHLAT-GSSDNTCKVWDLRMRS--ELYTIPAHSNLVSQVKYSPQEGYFLVT 405 (459)
T ss_pred cccC--cEEEEeccc-ccceeeEeECCCceEEee-cCCCCcEEEeeecccc--cceecccccchhhheEecccCCeEEEE
Confidence 7776 455666553 334558999999977654 3334445555443322 1111212221121 2367766666666
Q ss_pred EcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEE
Q 004690 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLA 391 (736)
Q Consensus 347 t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~ 391 (736)
...+. ..+|+...-- ...+.+..++..+.-.+++.+++.++
T Consensus 406 asyD~--t~kiWs~~~~--~~~ksLaGHe~kV~s~Dis~d~~~i~ 446 (459)
T KOG0272|consen 406 ASYDN--TVKIWSTRTW--SPLKSLAGHEGKVISLDISPDSQAIA 446 (459)
T ss_pred cccCc--ceeeecCCCc--ccchhhcCCccceEEEEeccCCceEE
Confidence 55552 3455543211 11222555555444344444444444
No 190
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.08 E-value=0.00089 Score=74.34 Aligned_cols=196 Identities=16% Similarity=0.132 Sum_probs=112.4
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECC-CCCeeccccc---CccceeEEeeCCeEEEEEeCCCCCCceEEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-TGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWL 265 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~-tg~~~~~~~~---~~~~~~~WspDg~l~y~~~~~~~~~~~v~~ 265 (736)
...+..+.|||||++|+= +++..+|+|||+. .+..+. ++. .....++|+|+|.++.....+. .|++
T Consensus 203 ~~~v~~~~fs~d~~~l~s-----~s~D~tiriwd~~~~~~~~~-~l~gH~~~v~~~~f~p~g~~i~Sgs~D~----tvri 272 (456)
T KOG0266|consen 203 TRGVSDVAFSPDGSYLLS-----GSDDKTLRIWDLKDDGRNLK-TLKGHSTYVTSVAFSPDGNLLVSGSDDG----TVRI 272 (456)
T ss_pred ccceeeeEECCCCcEEEE-----ecCCceEEEeeccCCCeEEE-EecCCCCceEEEEecCCCCEEEEecCCC----cEEE
Confidence 456889999999997763 4446789999994 434433 222 2346689999995555544332 3778
Q ss_pred EEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCce---EEeeccccc--ee-EEEeee
Q 004690 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL---RVLTPRVVG--VD-TAASHR 339 (736)
Q Consensus 266 ~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~---~~l~~~~~~--~~-~~~s~d 339 (736)
+++.++ +-...+..... ....+++++||++|+..+. ...|.+.|+.++. . +.+...... +. ..++|+
T Consensus 273 Wd~~~~--~~~~~l~~hs~-~is~~~f~~d~~~l~s~s~---d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~fsp~ 345 (456)
T KOG0266|consen 273 WDVRTG--ECVRKLKGHSD-GISGLAFSPDGNLLVSASY---DGTIRVWDLETGS-KLCLKLLSGAENSAPVTSVQFSPN 345 (456)
T ss_pred EeccCC--eEEEeeeccCC-ceEEEEECCCCCEEEEcCC---CccEEEEECCCCc-eeeeecccCCCCCCceeEEEECCC
Confidence 888875 44455544433 3446789999998876532 4557788888876 2 233333333 22 348899
Q ss_pred CCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCC-ceeeeEEEe-CCEEEEEEEeCCeeEEEEEEcCC
Q 004690 340 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES-VKLQDIQLF-IDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 340 g~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~-~~i~~~~~~-~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
|++|+..+... .|...++...........+... .-+..+..+ +...++....++. ++++++..
T Consensus 346 ~~~ll~~~~d~-----~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~--v~~~~~~s 410 (456)
T KOG0266|consen 346 GKYLLSASLDR-----TLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGS--VYVWDSSS 410 (456)
T ss_pred CcEEEEecCCC-----eEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCce--EEEEeCCc
Confidence 98777665432 3444444432111112222222 122222223 2334444444443 77787764
No 191
>PTZ00421 coronin; Provisional
Probab=98.08 E-value=0.0013 Score=73.11 Aligned_cols=200 Identities=9% Similarity=0.020 Sum_probs=109.8
Q ss_pred EEeeEEECC-CCCEEEEEEeCCCCcEEEEEEEECCCCCee-----cc-ccc---CccceeEEeeCC-eEEEEEeCCCCCC
Q 004690 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GK-PLV---GVTASVEWAGNE-ALVYITMDEILRP 260 (736)
Q Consensus 192 ~~~~~~~SP-DG~~la~~~~~~G~e~~~l~v~dl~tg~~~-----~~-~~~---~~~~~~~WspDg-~l~y~~~~~~~~~ 260 (736)
.+..+.||| |+++||-... ...|++||+.++... .. .+. .....++|+|++ .++.+...+
T Consensus 77 ~V~~v~fsP~d~~~LaSgS~-----DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D---- 147 (493)
T PTZ00421 77 PIIDVAFNPFDPQKLFTASE-----DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD---- 147 (493)
T ss_pred CEEEEEEcCCCCCEEEEEeC-----CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC----
Confidence 478889999 8888775433 347999999765321 01 122 224568999997 666665432
Q ss_pred ceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccc--eeEEEee
Q 004690 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASH 338 (736)
Q Consensus 261 ~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~--~~~~~s~ 338 (736)
..|.++++.++ +....+... .....++.|+|||+.|+..+.+ ..|.++|+.+++....+...... ....|.+
T Consensus 148 gtVrIWDl~tg--~~~~~l~~h-~~~V~sla~spdG~lLatgs~D---g~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 148 MVVNVWDVERG--KAVEVIKCH-SDQITSLEWNLDGSLLCTTSKD---KKLNIIDPRDGTIVSSVEAHASAKSQRCLWAK 221 (493)
T ss_pred CEEEEEECCCC--eEEEEEcCC-CCceEEEEEECCCCEEEEecCC---CEEEEEECCCCcEEEEEecCCCCcceEEEEcC
Confidence 24788888876 233333322 2334578899999987655433 34778888876622223322221 1244777
Q ss_pred eCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCC--CceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004690 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 339 dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~--~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
+++.++...... .....|...|+............+. ...+..++.+++.+++....++ .|++|++..
T Consensus 222 ~~~~ivt~G~s~-s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg--~Iriwdl~~ 291 (493)
T PTZ00421 222 RKDLIITLGCSK-SQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEG--NIRCFELMN 291 (493)
T ss_pred CCCeEEEEecCC-CCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCC--eEEEEEeeC
Confidence 777665443221 2245677777754322111222111 1112223334444554443344 477888863
No 192
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.08 E-value=1.1e-05 Score=65.43 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=53.4
Q ss_pred CeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcCh
Q 004690 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 575 (736)
Q Consensus 496 G~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~ 575 (736)
|.+|.+..+.|++ .+..+|+++||....+. .|...+..|+++||.|+..|.||+|.+... ....+.
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~~--ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~-------rg~~~~ 66 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHSG--RYAHLAEFLAEQGYAVFAYDHRGHGRSEGK-------RGHIDS 66 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHHH--HHHHHHHHHHhCCCEEEEECCCcCCCCCCc-------ccccCC
Confidence 5567776555543 15789999999654443 478888999999999999999999987531 112345
Q ss_pred HHHHHHHHHHH
Q 004690 576 FTDFIACAEYL 586 (736)
Q Consensus 576 ~~D~~~~~~~l 586 (736)
++++++-+..+
T Consensus 67 ~~~~v~D~~~~ 77 (79)
T PF12146_consen 67 FDDYVDDLHQF 77 (79)
T ss_pred HHHHHHHHHHH
Confidence 56666555443
No 193
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.06 E-value=0.0034 Score=66.45 Aligned_cols=203 Identities=14% Similarity=0.127 Sum_probs=115.5
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCe-eccc---ccCccceeEEeeCC-eEEEEEeCCCCCCceEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKP---LVGVTASVEWAGNE-ALVYITMDEILRPDKAW 264 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~-~~~~---~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~ 264 (736)
.+.+...++||.|-||| .|+..-.++|||....+. +..+ +.+....++|+.|+ +|+.+.... .+.-.++
T Consensus 59 ~~~vtVAkySPsG~yiA-----SGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGr-erfg~~F 132 (603)
T KOG0318|consen 59 AHQVTVAKYSPSGFYIA-----SGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGR-ERFGHVF 132 (603)
T ss_pred cceeEEEEeCCCceEEe-----ecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCc-cceeEEE
Confidence 35677889999999988 354455799999876443 3222 34445568999999 887765432 1122233
Q ss_pred EEEcCCC---------------------------C-CCcEEEEeecC----------CceEEEEEEcCCccEEEEEecCc
Q 004690 265 LHKLEAD---------------------------Q-SNDICLYHEKD----------DIYSLGLQASESKKFLFIASESK 306 (736)
Q Consensus 265 ~~~l~t~---------------------------~-~~~~~~~~~~~----------~~~~~~~~~S~Dg~~l~~~~~~~ 306 (736)
.++-|+. . ..-+..|+++. ..|.-.+.+||||+..+-...+
T Consensus 133 ~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsD- 211 (603)
T KOG0318|consen 133 LWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSD- 211 (603)
T ss_pred EecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCC-
Confidence 3332221 0 01223344321 1233457899999876543333
Q ss_pred ceeEEEEEeCCCCCceEEeec--cccceeE--EEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeee
Q 004690 307 ITRFVFYLDVSKPEELRVLTP--RVVGVDT--AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQD 382 (736)
Q Consensus 307 ~~~~l~~~dl~~~~~~~~l~~--~~~~~~~--~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~ 382 (736)
..++++|-.+++.+-.+-. ...|..| .|+||+.+++-.+... ..+|+-+.... -..+|.....-+-+..+
T Consensus 212 --gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk---t~KIWdVs~~s-lv~t~~~~~~v~dqqvG 285 (603)
T KOG0318|consen 212 --GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK---TIKIWDVSTNS-LVSTWPMGSTVEDQQVG 285 (603)
T ss_pred --ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc---eEEEEEeeccc-eEEEeecCCchhceEEE
Confidence 3578898888872223321 1122233 4999999988776543 45676655432 23445555443345567
Q ss_pred EEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 383 IQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 383 ~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
.-|.+++|+..... |. |..++.+
T Consensus 286 ~lWqkd~lItVSl~-G~--in~ln~~ 308 (603)
T KOG0318|consen 286 CLWQKDHLITVSLS-GT--INYLNPS 308 (603)
T ss_pred EEEeCCeEEEEEcC-cE--EEEeccc
Confidence 77888887655543 32 4455554
No 194
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=98.03 E-value=0.00076 Score=65.82 Aligned_cols=194 Identities=12% Similarity=0.062 Sum_probs=113.5
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-ccc-CccceeEEeeCC-eEEEEEeCCCCCCceEEEEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~-~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~ 267 (736)
..++...+|+||++.. +.+. .-.+++||+++|+.... ... ...-++++++|+ +|.=-+.| ..+.+++
T Consensus 64 H~v~dv~~s~dg~~al-S~sw----D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrD-----kTiklwn 133 (315)
T KOG0279|consen 64 HFVSDVVLSSDGNFAL-SASW----DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRD-----KTIKLWN 133 (315)
T ss_pred eEecceEEccCCceEE-eccc----cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCc-----ceeeeee
Confidence 3578899999999753 3333 34799999999977653 221 124569999999 56433323 2355555
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCcc-EEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eE-EEeeeCCEEE
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKK-FLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DT-AASHRGNHFF 344 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~-~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~-~~s~dg~~l~ 344 (736)
+-+. -...+.++....+..-+.|+|... -++++.+... -|-+.|+++-+ .+....+..+. .+ .+||||..+.
T Consensus 134 t~g~--ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk--tvKvWnl~~~~-l~~~~~gh~~~v~t~~vSpDGslca 208 (315)
T KOG0279|consen 134 TLGV--CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK--TVKVWNLRNCQ-LRTTFIGHSGYVNTVTVSPDGSLCA 208 (315)
T ss_pred eccc--EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc--eEEEEccCCcc-hhhccccccccEEEEEECCCCCEEe
Confidence 5443 122333332234444578999863 3444333332 24556776654 33322332332 22 4999998554
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004690 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
. + ...++++..|++.... +..-+....+..+.+.+++.++....+. .|.+|+++.
T Consensus 209 s----G-gkdg~~~LwdL~~~k~---lysl~a~~~v~sl~fspnrywL~~at~~--sIkIwdl~~ 263 (315)
T KOG0279|consen 209 S----G-GKDGEAMLWDLNEGKN---LYSLEAFDIVNSLCFSPNRYWLCAATAT--SIKIWDLES 263 (315)
T ss_pred c----C-CCCceEEEEEccCCce---eEeccCCCeEeeEEecCCceeEeeccCC--ceEEEeccc
Confidence 3 2 3457899999976322 3333334456777888887777665443 388999874
No 195
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.03 E-value=3.5e-05 Score=80.26 Aligned_cols=65 Identities=22% Similarity=0.256 Sum_probs=47.0
Q ss_pred ccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCC-ChHHHHHHHHHHHHHHHHhc
Q 004690 656 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS-GRFERLREAAFTYTFLMRAL 725 (736)
Q Consensus 656 ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~a~~~~fl~~~l 725 (736)
.|+|++||..|..||..++.+++.+.+.. +...+.++ +++|.... ...........+..||.+++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~---~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVP---GGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEec---CCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 57999999999999999999999988764 33344444 78898764 22322234455788998875
No 196
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.00 E-value=0.012 Score=63.17 Aligned_cols=253 Identities=15% Similarity=0.123 Sum_probs=120.4
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
.....+||||+++ |..++.| .|.++|+.+++.... .......+++.|+||+.+|++.-. +..+..++..+.
T Consensus 39 h~~~~~s~Dgr~~-yv~~rdg----~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~---~~~v~v~D~~tl 110 (369)
T PF02239_consen 39 HAGLKFSPDGRYL-YVANRDG----TVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYE---PGTVSVIDAETL 110 (369)
T ss_dssp EEEEE-TT-SSEE-EEEETTS----EEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEE---TTEEEEEETTT-
T ss_pred eeEEEecCCCCEE-EEEcCCC----eEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecC---CCceeEeccccc
Confidence 3456789999985 5556555 599999999997653 222234559999999655665421 235777777664
Q ss_pred CCCcEEEE-eec-C----CceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCce--EEeeccccceeEEEeeeCCEE
Q 004690 272 QSNDICLY-HEK-D----DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL--RVLTPRVVGVDTAASHRGNHF 343 (736)
Q Consensus 272 ~~~~~~~~-~~~-~----~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~--~~l~~~~~~~~~~~s~dg~~l 343 (736)
+.+... ... . ......+.-++++...+++.. +..+||++|..+.+.+ +.+.....-....|+++|+++
T Consensus 111 --e~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lk--d~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~ 186 (369)
T PF02239_consen 111 --EPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLK--DTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYF 186 (369)
T ss_dssp ---EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEET--TTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEE
T ss_pred --cceeecccccccccccCCCceeEEecCCCCEEEEEEc--cCCeEEEEEeccccccceeeecccccccccccCccccee
Confidence 222211 111 0 112234556788776555443 3458999998775411 222211111234599999988
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCc---eeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCC-CccccccC
Q 004690 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESV---KLQDIQLFIDHLAVYEREGGLQKITTYRLPAVG-EPLKSLQG 419 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~---~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g-~~~~~l~~ 419 (736)
+...+.. .++..+|..+. ....++..+... ....+--.+-+.+......+...+-.+.-+.-. .....|.-
T Consensus 187 ~va~~~s----n~i~viD~~~~-k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkv 261 (369)
T PF02239_consen 187 LVAANGS----NKIAVIDTKTG-KLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKV 261 (369)
T ss_dssp EEEEGGG----TEEEEEETTTT-EEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSE
T ss_pred eeccccc----ceeEEEeeccc-eEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeE
Confidence 8776654 27888887652 222233222111 122222122233444444443333333333211 11111211
Q ss_pred CceeeecCcccccCCCCcccCcceEEEE-eccCCCCcEEEEEECCCCc
Q 004690 420 GKSVEFIDPVYSIDPSESVFSSRILRFH-YSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 420 ~~~i~~p~~~~~v~~~~~~~~~~~~~~~-~ss~~~P~~~~~~d~~~~~ 466 (736)
-+.|..+..+ + .+..++++..+++. +.++. -.++..+|.++.+
T Consensus 262 v~~I~~~G~g--l-Fi~thP~s~~vwvd~~~~~~-~~~v~viD~~tl~ 305 (369)
T PF02239_consen 262 VKTIPTQGGG--L-FIKTHPDSRYVWVDTFLNPD-ADTVQVIDKKTLK 305 (369)
T ss_dssp EEEEE-SSSS-----EE--TT-SEEEEE-TT-SS-HT-EEEEECCGTE
T ss_pred EEEEECCCCc--c-eeecCCCCccEEeeccCCCC-CceEEEEECcCcc
Confidence 2334433222 1 12346678888776 33344 5679999987764
No 197
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.97 E-value=0.00012 Score=78.05 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=55.8
Q ss_pred chhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 535 NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 535 ~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
....+.|+. |+.|++.|..--+.- ....+.-.++|++..+...++. +.++ +-++|.|+||.+++++++
T Consensus 120 RS~V~~Ll~-g~dVYl~DW~~p~~v--------p~~~~~f~ldDYi~~l~~~i~~--~G~~-v~l~GvCqgG~~~laa~A 187 (406)
T TIGR01849 120 RSTVEALLP-DHDVYITDWVNARMV--------PLSAGKFDLEDYIDYLIEFIRF--LGPD-IHVIAVCQPAVPVLAAVA 187 (406)
T ss_pred HHHHHHHhC-CCcEEEEeCCCCCCC--------chhcCCCCHHHHHHHHHHHHHH--hCCC-CcEEEEchhhHHHHHHHH
Confidence 344567778 999999997532211 0122344567777544443332 2344 999999999999776655
Q ss_pred hC-----CCceeEEEEcCCccch
Q 004690 615 MR-----PDLFKAAVAAVPFVDV 632 (736)
Q Consensus 615 ~~-----p~~~~a~v~~~p~~d~ 632 (736)
.. |..++.+++..+.+|.
T Consensus 188 l~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 188 LMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred HHHhcCCCCCcceEEEEecCccC
Confidence 43 5678998988887775
No 198
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=97.93 E-value=0.00016 Score=71.74 Aligned_cols=139 Identities=19% Similarity=0.207 Sum_probs=86.7
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-c-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
-..+||+|++||-..+ +.+.|+|.+|-+..++ . ++. ...+.|+.|. .++-....+. .|..+++...
T Consensus 13 ~c~fSp~g~yiAs~~~------yrlviRd~~tlq~~qlf~cldk-i~yieW~ads~~ilC~~yk~~----~vqvwsl~Qp 81 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSR------YRLVIRDSETLQLHQLFLCLDK-IVYIEWKADSCHILCVAYKDP----KVQVWSLVQP 81 (447)
T ss_pred ceeECCCCCeeeeeee------eEEEEeccchhhHHHHHHHHHH-hhheeeeccceeeeeeeeccc----eEEEEEeecc
Confidence 3589999999997764 7899999998777654 2 233 3448999999 6665554332 3666666554
Q ss_pred CCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eEEEeeeCCEEEEEEcCC
Q 004690 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSD 350 (736)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~t~~~ 350 (736)
+-..-.++. +.-..++.||||||.|+..+.-.-.-.+|.+....+ ..+.-...++ .+.+.+||+...+.+.++
T Consensus 82 --ew~ckIdeg-~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~---~~~~~pK~~~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 82 --EWYCKIDEG-QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG---YLLPHPKTNVKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred --eeEEEeccC-CCcceeeeECCCcceEeeeecceeEEEEEEecccee---EEecccccCceeEEECCCCceeeeeeccc
Confidence 222222222 222346789999999987765433334455443332 1221111222 366899999999998887
No 199
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=97.93 E-value=0.002 Score=68.54 Aligned_cols=201 Identities=13% Similarity=0.129 Sum_probs=119.4
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec---ccccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG---KPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~---~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
-.-++||.|+|++|-..- ..|.|++..+=..+. +.++++.. ++|||-+ -|+|-+....+.|.++-+..+
T Consensus 308 WP~frWS~DdKy~Arm~~------~sisIyEtpsf~lld~Kslki~gIr~-FswsP~~~llAYwtpe~~~~parvtL~ev 380 (698)
T KOG2314|consen 308 WPIFRWSHDDKYFARMTG------NSISIYETPSFMLLDKKSLKISGIRD-FSWSPTSNLLAYWTPETNNIPARVTLMEV 380 (698)
T ss_pred cceEEeccCCceeEEecc------ceEEEEecCceeeecccccCCccccC-cccCCCcceEEEEcccccCCcceEEEEec
Confidence 456799999999996643 246666554422221 23455544 8999999 688887666677888888888
Q ss_pred CCCCCC-cEEEEeecCCceEEEEEEcCCccEEEEEecCcc---------eeEEEEEeCCCCCceEEeeccccc-eeEEEe
Q 004690 269 EADQSN-DICLYHEKDDIYSLGLQASESKKFLFIASESKI---------TRFVFYLDVSKPEELRVLTPRVVG-VDTAAS 337 (736)
Q Consensus 269 ~t~~~~-~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~---------~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s 337 (736)
.+.+.- ..-++.-.| +.+.|-+.|.||.+...+.. +-+|+.++-.+-. +.. .+-.+- ..+.|.
T Consensus 381 Ps~~~iRt~nlfnVsD----ckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIp-ve~-velke~vi~FaWE 454 (698)
T KOG2314|consen 381 PSKREIRTKNLFNVSD----CKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIP-VEV-VELKESVIAFAWE 454 (698)
T ss_pred Cccceeeeccceeeec----cEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCC-cee-eecchheeeeeec
Confidence 766321 111232222 24679999999999875421 2367776544321 222 222222 345699
Q ss_pred eeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceee--eEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 338 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQ--DIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 338 ~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~--~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
|.|+++.+++......+-+.|.+.... .... ++..-+..... .+++-+..+++.........+..|+.+
T Consensus 455 P~gdkF~vi~g~~~k~tvsfY~~e~~~-~~~~-lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~ 525 (698)
T KOG2314|consen 455 PHGDKFAVISGNTVKNTVSFYAVETNI-KKPS-LVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTD 525 (698)
T ss_pred cCCCeEEEEEccccccceeEEEeecCC-Cchh-hhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecc
Confidence 999999988766534566677765422 1111 22222222222 455556677776665455567788776
No 200
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.90 E-value=0.00027 Score=80.00 Aligned_cols=116 Identities=12% Similarity=0.108 Sum_probs=76.7
Q ss_pred EeeEEECCCCCEEEEEEeCC-------CCcEEEEEEEECCCCCeecccccCccceeEEeeCC-eEEEEEeCCCCCCceEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTK-------GDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 264 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~-------G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~ 264 (736)
+..++|||||+.|+|..+.+ .+...+|+++++++++... .+++....+.||||| +++|+.. .+|+
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-~~~g~Issl~wSpDG~RiA~i~~------g~v~ 471 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-RVPGPISELQLSRDGVRAAMIIG------GKVY 471 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh-ccCCCcCeEEECCCCCEEEEEEC------CEEE
Confidence 67899999999999887531 1224589999999888765 555556779999999 8999873 2577
Q ss_pred E---EEcCCCCCCcEEE-----EeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 265 L---HKLEADQSNDICL-----YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 265 ~---~~l~t~~~~~~~~-----~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
. .+.+.+ ...+ +.........++.|..|++ |++... .....+|.+++++..
T Consensus 472 Va~Vvr~~~G---~~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~V~~~-~~~~~v~~v~vDG~~ 530 (591)
T PRK13616 472 LAVVEQTEDG---QYALTNPREVGPGLGDTAVSLDWRTGDS-LVVGRS-DPEHPVWYVNLDGSN 530 (591)
T ss_pred EEEEEeCCCC---ceeecccEEeecccCCccccceEecCCE-EEEEec-CCCCceEEEecCCcc
Confidence 6 333333 1222 1111111124678999998 444433 345678999998754
No 201
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.88 E-value=0.0024 Score=70.36 Aligned_cols=196 Identities=16% Similarity=0.143 Sum_probs=121.0
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec-cc-ccCccceeEEeeCCe-EEEEEeCCCCCCceEEEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KP-LVGVTASVEWAGNEA-LVYITMDEILRPDKAWLH 266 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~-~~-~~~~~~~~~WspDg~-l~y~~~~~~~~~~~v~~~ 266 (736)
+..+...+.||||++||= |.|...+.|||..+|-=.. .+ -......+.|+.+|. ++-.+.|.. |..+
T Consensus 350 ~~~i~~l~YSpDgq~iaT-----G~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGt-----VRAw 419 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQLIAT-----GAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGT-----VRAW 419 (893)
T ss_pred ccceeeEEECCCCcEEEe-----ccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCe-----EEee
Confidence 567899999999999994 4445679999998875332 11 122356689999995 444444553 5555
Q ss_pred EcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccc-ee-EEEeeeCCEEE
Q 004690 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VD-TAASHRGNHFF 344 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~-~~~s~dg~~l~ 344 (736)
++... ..-.-|+.+.+..+..++..|.|..+ .....+..+|+++++.+|+ +.-+..+.++ +. ..++++|+.|+
T Consensus 420 DlkRY--rNfRTft~P~p~QfscvavD~sGelV--~AG~~d~F~IfvWS~qTGq-llDiLsGHEgPVs~l~f~~~~~~La 494 (893)
T KOG0291|consen 420 DLKRY--RNFRTFTSPEPIQFSCVAVDPSGELV--CAGAQDSFEIFVWSVQTGQ-LLDILSGHEGPVSGLSFSPDGSLLA 494 (893)
T ss_pred eeccc--ceeeeecCCCceeeeEEEEcCCCCEE--EeeccceEEEEEEEeecCe-eeehhcCCCCcceeeEEccccCeEE
Confidence 55433 23344555555555567777778754 3556677899999999997 5444444333 33 35899999777
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
-.+.+. .-+++-+=-.. +..+ -+....++.-..|.++++.+.+...+. +|.+|+..
T Consensus 495 S~SWDk---TVRiW~if~s~-~~vE-tl~i~sdvl~vsfrPdG~elaVaTldg---qItf~d~~ 550 (893)
T KOG0291|consen 495 SGSWDK---TVRIWDIFSSS-GTVE-TLEIRSDVLAVSFRPDGKELAVATLDG---QITFFDIK 550 (893)
T ss_pred eccccc---eEEEEEeeccC-ceee-eEeeccceeEEEEcCCCCeEEEEEecc---eEEEEEhh
Confidence 666543 34454432221 1111 223333444456777788888777643 36667664
No 202
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.85 E-value=0.0004 Score=65.28 Aligned_cols=147 Identities=15% Similarity=0.146 Sum_probs=89.5
Q ss_pred hhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004690 536 SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (736)
Q Consensus 536 ~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~ 615 (736)
..+..|+++|+.|+.+|-+ -.-|.+ ..-.....|+...+++..++.. .+++.++|+|+|+-++-.+.++
T Consensus 20 ~~a~~l~~~G~~VvGvdsl-----~Yfw~~----rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nr 88 (192)
T PF06057_consen 20 QIAEALAKQGVPVVGVDSL-----RYFWSE----RTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNR 88 (192)
T ss_pred HHHHHHHHCCCeEEEechH-----HHHhhh----CCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhh
Confidence 3456899999999999864 122321 1223456788888888877643 4799999999999988888888
Q ss_pred CCC----ceeEEEEcCCcc---------chhhhccCCC-CCCccccccccccccccEEEeecCCCCCCCChHHHHHHHHH
Q 004690 616 RPD----LFKAAVAAVPFV---------DVLTTMLDPT-IPLTTAEWEVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKL 681 (736)
Q Consensus 616 ~p~----~~~a~v~~~p~~---------d~~~~~~~~~-~p~~~~~~~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l 681 (736)
-|. .++.+++.+|-. +|+....... .+.. .+ +......|++++.|.+|.-.. .-.+
T Consensus 89 Lp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~-pe--i~~l~~~~v~CiyG~~E~d~~-------cp~l 158 (192)
T PF06057_consen 89 LPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVI-PE--IAKLPPAPVQCIYGEDEDDSL-------CPSL 158 (192)
T ss_pred CCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCch-HH--HHhCCCCeEEEEEcCCCCCCc-------Cccc
Confidence 775 466677766632 1221111111 1110 01 444455679999998875321 1123
Q ss_pred HhcCCCCCeEEEEecCCCCcCCCCChHH
Q 004690 682 REMKTDDNILLFKCELGAGHFSKSGRFE 709 (736)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 709 (736)
+. ...+.+.+ .+||.+..+...
T Consensus 159 ~~--~~~~~i~l----pGgHHfd~dy~~ 180 (192)
T PF06057_consen 159 RQ--PGVEVIAL----PGGHHFDGDYDA 180 (192)
T ss_pred cC--CCcEEEEc----CCCcCCCCCHHH
Confidence 33 23445566 478877665443
No 203
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.85 E-value=0.00028 Score=77.97 Aligned_cols=129 Identities=19% Similarity=0.192 Sum_probs=84.6
Q ss_pred EEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCCCC----hhhhh--ccccc
Q 004690 498 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGELG----RQWYE--NGKFL 570 (736)
Q Consensus 498 ~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~RG~g~~g----~~~~~--~~~~~ 570 (736)
.|...+..|.+. ++ -.+..+-||+.......... ....-+.+||+++.-|- |+.+.. ..|.. .....
T Consensus 16 ~i~fev~LP~~W---Ng--R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNW---NG--RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhh---cc--CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHH
Confidence 677777778765 33 34555555554443322110 12345678999999985 443321 12220 00122
Q ss_pred cCcChHHHHHHHHHHHHHcCC-CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccch
Q 004690 571 KKKNTFTDFIACAEYLIKNCY-CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 632 (736)
Q Consensus 571 ~~~~~~~D~~~~~~~l~~~~~-~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~ 632 (736)
.....+.+...+.+.|++..| ..|++-...|.|.||-.++.+|.++|+.|.++|+.+|..++
T Consensus 90 fa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 223456666777788887754 46789999999999999999999999999999999997764
No 204
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.85 E-value=0.012 Score=61.98 Aligned_cols=116 Identities=16% Similarity=0.048 Sum_probs=69.7
Q ss_pred CCCEEEEEEeCCC-CcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeC------CCCCCceEEEEEcCCCC
Q 004690 201 DNKLVAYAEDTKG-DEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMD------EILRPDKAWLHKLEADQ 272 (736)
Q Consensus 201 DG~~la~~~~~~G-~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~------~~~~~~~v~~~~l~t~~ 272 (736)
|+++ +|..+..- +-..+|+|+|.++++.+.. .....-. ...||||+.+|++.. ...+...|-.+++.+..
T Consensus 11 ~~~~-v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~-~~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~ 88 (352)
T TIGR02658 11 DARR-VYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPN-PVVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL 88 (352)
T ss_pred CCCE-EEEECCcccccCceEEEEECCCCEEEEEEEccCCCc-eeECCCCCEEEEEeccccccccCCCCCEEEEEECccCc
Confidence 5555 67776541 1115799999999988753 2222222 249999966666543 22234567788887763
Q ss_pred CCcEEEEeecCCc-----eEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 273 SNDICLYHEKDDI-----YSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 273 ~~~~~~~~~~~~~-----~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
....+... .++. .-..++.|||||+|++. +....+.|-++|+++++
T Consensus 89 ~~~~i~~p-~~p~~~~~~~~~~~~ls~dgk~l~V~-n~~p~~~V~VvD~~~~k 139 (352)
T TIGR02658 89 PIADIELP-EGPRFLVGTYPWMTSLTPDNKTLLFY-QFSPSPAVGVVDLEGKA 139 (352)
T ss_pred EEeEEccC-CCchhhccCccceEEECCCCCEEEEe-cCCCCCEEEEEECCCCc
Confidence 32222221 2222 12246789999999874 33335668899998876
No 205
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.85 E-value=0.03 Score=59.42 Aligned_cols=188 Identities=9% Similarity=0.079 Sum_probs=93.9
Q ss_pred EEEEEeCCCCcEEEEEEEECCC-CCeecc-cc--cCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEe
Q 004690 205 VAYAEDTKGDEIYTVYVIDIET-GTPVGK-PL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYH 280 (736)
Q Consensus 205 la~~~~~~G~e~~~l~v~dl~t-g~~~~~-~~--~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~ 280 (736)
.+|.....+ ..|+++|+.+ |+.... .+ .+....++++||++++|+.... ...|..+++.... .-..+-.
T Consensus 3 ~~y~~~~~~---~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~---~~~i~~~~~~~~g-~l~~~~~ 75 (330)
T PRK11028 3 IVYIASPES---QQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRP---EFRVLSYRIADDG-ALTFAAE 75 (330)
T ss_pred EEEEEcCCC---CCEEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECC---CCcEEEEEECCCC-ceEEeee
Confidence 456665433 3578888864 443221 22 2334558999999666665432 2346656665221 1111111
Q ss_pred ecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCC-CC--ceEEeeccccce-eEEEeeeCCEEEEEEcCCCCCCcE
Q 004690 281 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK-PE--ELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSE 356 (736)
Q Consensus 281 ~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~-~~--~~~~l~~~~~~~-~~~~s~dg~~l~~~t~~~~~~~~~ 356 (736)
......-..+.++|||++|+..... ...|.+++++. +. ..........+. ...++|+|+++|+....+ ..
T Consensus 76 ~~~~~~p~~i~~~~~g~~l~v~~~~--~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~----~~ 149 (330)
T PRK11028 76 SPLPGSPTHISTDHQGRFLFSASYN--ANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKE----DR 149 (330)
T ss_pred ecCCCCceEEEECCCCCEEEEEEcC--CCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCC----CE
Confidence 1111112357789999998876543 34556666643 22 111111121122 234889998877655432 35
Q ss_pred EEEEeCCCCCcee------eEecCCCCceeeeEEEeCC--EEEEEEEeCCeeEEEEEEcCC
Q 004690 357 LLACPVDNTSETT------VLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 357 l~~~~~~~~~~~~------~l~~~~~~~~i~~~~~~~~--~l~~~~~~~g~~~l~v~~l~~ 409 (736)
|..++++..+... .-++.+. ....+.+..+ ++++. ..+...+.+|+++.
T Consensus 150 v~v~d~~~~g~l~~~~~~~~~~~~g~--~p~~~~~~pdg~~lyv~--~~~~~~v~v~~~~~ 206 (330)
T PRK11028 150 IRLFTLSDDGHLVAQEPAEVTTVEGA--GPRHMVFHPNQQYAYCV--NELNSSVDVWQLKD 206 (330)
T ss_pred EEEEEECCCCcccccCCCceecCCCC--CCceEEECCCCCEEEEE--ecCCCEEEEEEEeC
Confidence 6667665422110 0112221 2334454454 44443 34446688888874
No 206
>PRK10115 protease 2; Provisional
Probab=97.85 E-value=0.0066 Score=70.70 Aligned_cols=211 Identities=9% Similarity=0.041 Sum_probs=115.8
Q ss_pred cceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCc---ceeEEEE
Q 004690 238 TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK---ITRFVFY 313 (736)
Q Consensus 238 ~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~---~~~~l~~ 313 (736)
.+.+.||||| .|+|.......+.++|+..++.++..-...+ .... ..+.|++||+.|++..... ...+||+
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i---~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELL---DNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccc---cCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 4568999999 7999887777788899999998762101111 1112 3478999999999988643 2368999
Q ss_pred EeCCCCC-ceEEeeccccceeE---EEeeeCCEEEEEEcCCCCCCcEEEEEeCCCC-CceeeEecCCCCceeeeEEEeCC
Q 004690 314 LDVSKPE-ELRVLTPRVVGVDT---AASHRGNHFFITRRSDELFNSELLACPVDNT-SETTVLIPHRESVKLQDIQLFID 388 (736)
Q Consensus 314 ~dl~~~~-~~~~l~~~~~~~~~---~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~-~~~~~l~~~~~~~~i~~~~~~~~ 388 (736)
.++.++. .-++|....++..+ ..+.+++++++.++.. ....++.++.+.+ +....+++...+... .+.-.++
T Consensus 204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 280 (686)
T PRK10115 204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASA--TTSEVLLLDAELADAEPFVFLPRRKDHEY-SLDHYQH 280 (686)
T ss_pred EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECC--ccccEEEEECcCCCCCceEEEECCCCCEE-EEEeCCC
Confidence 9999883 24555554333222 2344888887666554 2345665553221 122224444444433 3444456
Q ss_pred EEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecC-cccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCc
Q 004690 389 HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID-PVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 389 ~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~-~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~ 466 (736)
.+++....+ .+...++.++.... ..+ +.+ +++ +...+.++.. .++.+++++..-..+ .++.+|+.+++
T Consensus 281 ~ly~~tn~~-~~~~~l~~~~~~~~--~~~---~~l-~~~~~~~~i~~~~~--~~~~l~~~~~~~g~~-~l~~~~~~~~~ 349 (686)
T PRK10115 281 RFYLRSNRH-GKNFGLYRTRVRDE--QQW---EEL-IPPRENIMLEGFTL--FTDWLVVEERQRGLT-SLRQINRKTRE 349 (686)
T ss_pred EEEEEEcCC-CCCceEEEecCCCc--ccC---eEE-ECCCCCCEEEEEEE--ECCEEEEEEEeCCEE-EEEEEcCCCCc
Confidence 777666543 33344444443211 001 122 232 2223322222 244565555544433 47777765443
No 207
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.82 E-value=0.0012 Score=66.66 Aligned_cols=104 Identities=18% Similarity=0.214 Sum_probs=65.7
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccc-c-cCccceeEEeeCC-eEEEEEeCCCCCCceEE-
Q 004690 189 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-L-VGVTASVEWAGNE-ALVYITMDEILRPDKAW- 264 (736)
Q Consensus 189 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~-~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~- 264 (736)
|..-+..++|.+||..++=.+- | ...|.|||+++|.-+++. . .+.++-+.||||| .|+-.+.|. -+.||
T Consensus 194 gh~pVtsmqwn~dgt~l~tAS~--g--sssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~da---vfrlw~ 266 (445)
T KOG2139|consen 194 GHNPVTSMQWNEDGTILVTASF--G--SSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDA---VFRLWQ 266 (445)
T ss_pred CCceeeEEEEcCCCCEEeeccc--C--cceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccc---eeeeeh
Confidence 4566889999999998874443 3 367999999999877653 1 2335568999999 555555443 23455
Q ss_pred EEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecC
Q 004690 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES 305 (736)
Q Consensus 265 ~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~ 305 (736)
.++.-+. +. -+... .......|||+|++|+|....
T Consensus 267 e~q~wt~--er-w~lgs---grvqtacWspcGsfLLf~~sg 301 (445)
T KOG2139|consen 267 ENQSWTK--ER-WILGS---GRVQTACWSPCGSFLLFACSG 301 (445)
T ss_pred hccccee--cc-eeccC---CceeeeeecCCCCEEEEEEcC
Confidence 2222222 11 12211 123345699999999997743
No 208
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=97.79 E-value=0.007 Score=61.42 Aligned_cols=193 Identities=17% Similarity=0.160 Sum_probs=111.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cc-cCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+..+.|+|++++|+.... ...|+++|+.+++.... .. ......+.|++++.++++...+ ..+..+++.+
T Consensus 54 i~~~~~~~~~~~l~~~~~-----~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~i~~~~~~~ 124 (289)
T cd00200 54 VRDVAASADGTYLASGSS-----DKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRD----KTIKVWDVET 124 (289)
T ss_pred eeEEEECCCCCEEEEEcC-----CCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCC----CeEEEEECCC
Confidence 467899999988877654 24699999998654432 22 2234568999998666665422 3578888875
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEEcC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~ 349 (736)
. +....+... ......+.++|++++|+... ....|+++|+.+++....+......+. ..|+++++.+++.+.
T Consensus 125 ~--~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 197 (289)
T cd00200 125 G--KCLTTLRGH-TDWVNSVAFSPDGTFVASSS---QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSS- 197 (289)
T ss_pred c--EEEEEeccC-CCcEEEEEEcCcCCEEEEEc---CCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecC-
Confidence 4 223333322 22344678999988776654 223578888876551222322222222 348888887877765
Q ss_pred CCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCC
Q 004690 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 350 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~ 409 (736)
+ ..+...++........+..+. ..+..+.+..+ .+++....++ .+.+|++..
T Consensus 198 ~----~~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~--~i~i~~~~~ 250 (289)
T cd00200 198 D----GTIKLWDLSTGKCLGTLRGHE--NGVNSVAFSPDGYLLASGSEDG--TIRVWDLRT 250 (289)
T ss_pred C----CcEEEEECCCCceecchhhcC--CceEEEEEcCCCcEEEEEcCCC--cEEEEEcCC
Confidence 3 346666765421111121222 24556666664 3444443344 477888763
No 209
>COG3150 Predicted esterase [General function prediction only]
Probab=97.79 E-value=0.00046 Score=62.38 Aligned_cols=114 Identities=21% Similarity=0.239 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEE---cCCccchhhhccCCCCCCcccccc----
Q 004690 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA---AVPFVDVLTTMLDPTIPLTTAEWE---- 649 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~---~~p~~d~~~~~~~~~~p~~~~~~~---- 649 (736)
..+.+-++-++.+.. | ..++|+|-|.||+.+.+++.+.- +++++. ..|.-+|..++..+..|.+..+|.
T Consensus 43 ~~a~~ele~~i~~~~-~-~~p~ivGssLGGY~At~l~~~~G--irav~~NPav~P~e~l~gylg~~en~ytg~~y~le~~ 118 (191)
T COG3150 43 QQALKELEKAVQELG-D-ESPLIVGSSLGGYYATWLGFLCG--IRAVVFNPAVRPYELLTGYLGRPENPYTGQEYVLESR 118 (191)
T ss_pred HHHHHHHHHHHHHcC-C-CCceEEeecchHHHHHHHHHHhC--ChhhhcCCCcCchhhhhhhcCCCCCCCCcceEEeehh
Confidence 455555665555432 2 23899999999999999998853 455442 234444555555666666666773
Q ss_pred ---------ccccccccEEEeecCC-CCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCC
Q 004690 650 ---------VKAQNYPHILVTAGLN-DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 704 (736)
Q Consensus 650 ---------i~~~~~ppvLi~~G~~-D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~ 704 (736)
+.....|..|++-... |.+..+.++...+..... ++.. |+.|.|.
T Consensus 119 hI~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~~~-------~V~d---gg~H~F~ 173 (191)
T COG3150 119 HIATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPCYE-------IVWD---GGDHKFK 173 (191)
T ss_pred hHHHHHHhhccccCCCcEEEeecccccHHHHHHHHHHHhhhhhh-------eeec---CCCcccc
Confidence 3344667777776666 988877777666654432 2343 7889874
No 210
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=97.74 E-value=0.0038 Score=60.05 Aligned_cols=147 Identities=15% Similarity=0.149 Sum_probs=87.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCc---cceeEEeeCCeEEEEEeCCC----------
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV---TASVEWAGNEALVYITMDEI---------- 257 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~---~~~~~WspDg~l~y~~~~~~---------- 257 (736)
.+....++||++.||-. | +..|+++|+.++...+. ++++. ...+.|--||+..|+..++.
T Consensus 42 qVNrLeiTpdk~~LAaa----~--~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~ 115 (311)
T KOG0315|consen 42 QVNRLEITPDKKDLAAA----G--NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL 115 (311)
T ss_pred ceeeEEEcCCcchhhhc----c--CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc
Confidence 47778999999999843 3 57899999999887554 44332 44578888887777765431
Q ss_pred ---------------------------CCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeE
Q 004690 258 ---------------------------LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRF 310 (736)
Q Consensus 258 ---------------------------~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~ 310 (736)
.+...|+.++++...-...++ .|.+ .+.-++...|||++|+. .+++++-
T Consensus 116 ~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li-Pe~~-~~i~sl~v~~dgsml~a-~nnkG~c- 191 (311)
T KOG0315|consen 116 SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI-PEDD-TSIQSLTVMPDGSMLAA-ANNKGNC- 191 (311)
T ss_pred ccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC-CCCC-cceeeEEEcCCCcEEEE-ecCCccE-
Confidence 012235555665542211222 2222 34446778999998764 4444444
Q ss_pred EEEEeCCCCC---ceEEeeccc--c--ceeEEEeeeCCEEEEEEcC
Q 004690 311 VFYLDVSKPE---ELRVLTPRV--V--GVDTAASHRGNHFFITRRS 349 (736)
Q Consensus 311 l~~~dl~~~~---~~~~l~~~~--~--~~~~~~s~dg~~l~~~t~~ 349 (736)
|+.++-+.. .+.++.+-. . .....+|||+++|+-.+.+
T Consensus 192 -yvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd 236 (311)
T KOG0315|consen 192 -YVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD 236 (311)
T ss_pred -EEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCC
Confidence 554443332 344444321 1 1234599999988766554
No 211
>PTZ00420 coronin; Provisional
Probab=97.72 E-value=0.0068 Score=68.14 Aligned_cols=117 Identities=14% Similarity=0.097 Sum_probs=73.4
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
.+..+.|+|++..++.+....| .|.+||+.+++.... .......+++|+|||.++.++..+ ..|.++++.+
T Consensus 127 ~V~sVaf~P~g~~iLaSgS~Dg----tIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D----~~IrIwD~Rs 198 (568)
T PTZ00420 127 KISIIDWNPMNYYIMCSSGFDS----FVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVG----KHMHIIDPRK 198 (568)
T ss_pred cEEEEEECCCCCeEEEEEeCCC----eEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecC----CEEEEEECCC
Confidence 4788999999998776655444 699999999875432 223345569999999655544322 2477888876
Q ss_pred CCCCcEEEEeecCCceE----EEEEEcCCccEEEEEecCc-ceeEEEEEeCCC
Q 004690 271 DQSNDICLYHEKDDIYS----LGLQASESKKFLFIASESK-ITRFVFYLDVSK 318 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~----~~~~~S~Dg~~l~~~~~~~-~~~~l~~~dl~~ 318 (736)
+ +....+........ ....+++|+++|+....+. ....|.++|+..
T Consensus 199 g--~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 199 Q--EIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred C--cEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence 5 22222322221111 1123578999887766543 334688888875
No 212
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.72 E-value=0.00016 Score=79.99 Aligned_cols=114 Identities=21% Similarity=0.204 Sum_probs=71.2
Q ss_pred CcEEEEecCCCCcCCC-CCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhc----cccccCcChHHHHHHHHHHHHHc
Q 004690 516 DPLLLYGYGSYEICND-PAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYEN----GKFLKKKNTFTDFIACAEYLIKN 589 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~-~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~----~~~~~~~~~~~D~~~~~~~l~~~ 589 (736)
.|++|++-| -+.... .........||++ |..+++...|--|++-. +.+. -+...-...+.|+...++++..+
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P-~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQP-FGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-T-TGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCC-ccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 788888844 222111 0112234466665 99999999998776421 1111 12233356889999999999865
Q ss_pred C-CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccc
Q 004690 590 C-YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 631 (736)
Q Consensus 590 ~-~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d 631 (736)
. ..+..+++++|+|+||.|++++-.++|++|.|+++.++++.
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3 33446999999999999999999999999999998887654
No 213
>PTZ00420 coronin; Provisional
Probab=97.72 E-value=0.018 Score=64.73 Aligned_cols=198 Identities=13% Similarity=0.086 Sum_probs=105.4
Q ss_pred EEeeEEECCC-CCEEEEEEeCCCCcEEEEEEEECCCCCe-ec-----c-cc---cCccceeEEeeCC-eEEEEEeCCCCC
Q 004690 192 SVGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTP-VG-----K-PL---VGVTASVEWAGNE-ALVYITMDEILR 259 (736)
Q Consensus 192 ~~~~~~~SPD-G~~la~~~~~~G~e~~~l~v~dl~tg~~-~~-----~-~~---~~~~~~~~WspDg-~l~y~~~~~~~~ 259 (736)
.+..+.|+|+ +++||-.. . ...|++||+.++.. .. . .+ ......++|+|++ .++.+...+
T Consensus 76 ~V~~lafsP~~~~lLASgS-~----DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~D--- 147 (568)
T PTZ00420 76 SILDLQFNPCFSEILASGS-E----DLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFD--- 147 (568)
T ss_pred CEEEEEEcCCCCCEEEEEe-C----CCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCC---
Confidence 5788899997 66665433 2 34799999976431 10 0 11 1234568999999 565554432
Q ss_pred CceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce--eEE--
Q 004690 260 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DTA-- 335 (736)
Q Consensus 260 ~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~--~~~-- 335 (736)
..|.++++.++. ....+.. .....++.|++||+.|+..+.+ ..|.++|+.+++....+....... ...
T Consensus 148 -gtIrIWDl~tg~--~~~~i~~--~~~V~SlswspdG~lLat~s~D---~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~ 219 (568)
T PTZ00420 148 -SFVNIWDIENEK--RAFQINM--PKKLSSLKWNIKGNLLSGTCVG---KHMHIIDPRKQEIASSFHIHDGGKNTKNIWI 219 (568)
T ss_pred -CeEEEEECCCCc--EEEEEec--CCcEEEEEECCCCCEEEEEecC---CEEEEEECCCCcEEEEEecccCCceeEEEEe
Confidence 247788888763 2222222 2234578899999988654432 357888988876222233332221 111
Q ss_pred --EeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCC--CceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 336 --ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 336 --~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~--~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
++++++.|+.....+ .....|...|+.........+..+. ...+..+....+.+++....++ .+++|++.
T Consensus 220 ~~fs~d~~~IlTtG~d~-~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~--tIr~~e~~ 293 (568)
T PTZ00420 220 DGLGGDDNYILSTGFSK-NNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDG--NCRYYQHS 293 (568)
T ss_pred eeEcCCCCEEEEEEcCC-CCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCC--eEEEEEcc
Confidence 346777655544332 2223577777764222111222111 1111122222344555555444 47778775
No 214
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=97.72 E-value=0.0006 Score=70.84 Aligned_cols=157 Identities=14% Similarity=0.210 Sum_probs=101.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
++..+.+|||+++||+.-. .-.|+++...|++.+.. .+++..+.+.|+.||+.++..... .+||.+++..
T Consensus 305 ~~e~FeVShd~~fia~~G~-----~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~----GeV~v~nl~~ 375 (514)
T KOG2055|consen 305 SMERFEVSHDSNFIAIAGN-----NGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGT----GEVYVWNLRQ 375 (514)
T ss_pred hhheeEecCCCCeEEEccc-----CceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCC----ceEEEEecCC
Confidence 6778999999999987533 24699999999987653 678888889999999544444322 2699999987
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeC--CCCCceEEeec---ccccee-EEEeeeCCEEE
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV--SKPEELRVLTP---RVVGVD-TAASHRGNHFF 344 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl--~~~~~~~~l~~---~~~~~~-~~~s~dg~~l~ 344 (736)
. .-...|...+.-...+++.|.+|+|++..+.++- -.||-.+. .+.. ++++.. -.-.+. ..|+||+.-|+
T Consensus 376 ~--~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~Gi-VNIYd~~s~~~s~~-PkPik~~dNLtt~Itsl~Fn~d~qiLA 451 (514)
T KOG2055|consen 376 N--SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGI-VNIYDGNSCFASTN-PKPIKTVDNLTTAITSLQFNHDAQILA 451 (514)
T ss_pred c--ceEEEEeecCccceeeeeecCCCceEEeccCcce-EEEeccchhhccCC-CCchhhhhhhheeeeeeeeCcchhhhh
Confidence 6 3344444444444556788999999887665432 23343221 1122 333322 111222 34899999888
Q ss_pred EEEcCCCCCCcEEEEEeC
Q 004690 345 ITRRSDELFNSELLACPV 362 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~ 362 (736)
+.++.. ....+|+-++-
T Consensus 452 iaS~~~-knalrLVHvPS 468 (514)
T KOG2055|consen 452 IASRVK-KNALRLVHVPS 468 (514)
T ss_pred hhhhcc-ccceEEEeccc
Confidence 888765 33456665543
No 215
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.71 E-value=0.078 Score=54.24 Aligned_cols=243 Identities=11% Similarity=0.100 Sum_probs=111.8
Q ss_pred EEEEEECC--CCCeecc-cc--cCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEee----cCCceEE
Q 004690 218 TVYVIDIE--TGTPVGK-PL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE----KDDIYSL 288 (736)
Q Consensus 218 ~l~v~dl~--tg~~~~~-~~--~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~----~~~~~~~ 288 (736)
.|++++++ +|+.... .. .+...-++|+|+++.+|+...... ...+-.+.++....+ ..+... ..+. .
T Consensus 17 gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~-~ggvaay~iD~~~G~-Lt~ln~~~~~g~~p--~ 92 (346)
T COG2706 17 GIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGE-EGGVAAYRIDPDDGR-LTFLNRQTLPGSPP--C 92 (346)
T ss_pred ceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCC-cCcEEEEEEcCCCCe-EEEeeccccCCCCC--e
Confidence 46666655 4554322 11 122345899999965565543211 223444444432111 122211 1222 3
Q ss_pred EEEEcCCccEEEEEecCcceeEEEEEeCCCCC--ceEEeeccccc----------eeEE-EeeeCCEEEEEEcCCCCCCc
Q 004690 289 GLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVG----------VDTA-ASHRGNHFFITRRSDELFNS 355 (736)
Q Consensus 289 ~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~--~~~~l~~~~~~----------~~~~-~s~dg~~l~~~t~~~~~~~~ 355 (736)
.++.++||++|+...-..+.-.++-+..+ |. ....+...... +.+. ++|+|+.| ++.+.+ .+..
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l-~v~DLG-~Dri 169 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYL-VVPDLG-TDRI 169 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccC-CccccceeeeecCCCCCCccccCCccceeeeCCCCCEE-EEeecC-CceE
Confidence 46779999998876655444344444333 33 12112211111 2333 88998855 444544 4444
Q ss_pred EEEEEeCCCCC-ceee-EecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCcee-eecCcccc-
Q 004690 356 ELLACPVDNTS-ETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV-EFIDPVYS- 431 (736)
Q Consensus 356 ~l~~~~~~~~~-~~~~-l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i-~~p~~~~~- 431 (736)
.+|.++ ++.. .... .+.++.+-.=--|.+.++..|+...- .+.+.++..+..+..+..++ .+ .+|+. |+
T Consensus 170 ~~y~~~-dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL--~stV~v~~y~~~~g~~~~lQ---~i~tlP~d-F~g 242 (346)
T COG2706 170 FLYDLD-DGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNEL--NSTVDVLEYNPAVGKFEELQ---TIDTLPED-FTG 242 (346)
T ss_pred EEEEcc-cCccccccccccCCCCCcceEEEcCCCcEEEEEecc--CCEEEEEEEcCCCceEEEee---eeccCccc-cCC
Confidence 444444 2211 1111 33333322212345555555544433 34577777775434333221 12 23332 11
Q ss_pred ---cCCCCcccCcceEEEEeccCCCCcEEEEEECCCCcEEEEEEeee
Q 004690 432 ---IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETV 475 (736)
Q Consensus 432 ---v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~ 475 (736)
...+-.+.++. +++...-...--.+|.+|..+++..+......
T Consensus 243 ~~~~aaIhis~dGr-FLYasNRg~dsI~~f~V~~~~g~L~~~~~~~t 288 (346)
T COG2706 243 TNWAAAIHISPDGR-FLYASNRGHDSIAVFSVDPDGGKLELVGITPT 288 (346)
T ss_pred CCceeEEEECCCCC-EEEEecCCCCeEEEEEEcCCCCEEEEEEEecc
Confidence 11223344553 33433334444567788888888766655443
No 216
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.68 E-value=0.00024 Score=74.07 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=62.0
Q ss_pred chhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 535 NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 535 ~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
......++++|..|++++.|+-...-.. ........+++..|++.+++... .++|-++|+|.||.+...+++
T Consensus 129 ~s~V~~l~~~g~~vfvIsw~nPd~~~~~------~~~edYi~e~l~~aid~v~~itg--~~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 129 KSLVRWLLEQGLDVFVISWRNPDASLAA------KNLEDYILEGLSEAIDTVKDITG--QKDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred ccHHHHHHHcCCceEEEeccCchHhhhh------ccHHHHHHHHHHHHHHHHHHHhC--ccccceeeEecchHHHHHHHH
Confidence 3456788999999999998764322111 11111223556678888877533 378999999999999988888
Q ss_pred hCCCc-eeEEEEcCCccch
Q 004690 615 MRPDL-FKAAVAAVPFVDV 632 (736)
Q Consensus 615 ~~p~~-~~a~v~~~p~~d~ 632 (736)
..+.. ++.++...-.+|+
T Consensus 201 ~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 201 LMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred hhhhcccccceeeecchhh
Confidence 87776 7777766655554
No 217
>PRK04940 hypothetical protein; Provisional
Probab=97.63 E-value=0.00073 Score=63.37 Aligned_cols=112 Identities=18% Similarity=0.058 Sum_probs=67.2
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCC-CCCCcccccc------ccccccccEEEeecCCCC
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP-TIPLTTAEWE------VKAQNYPHILVTAGLNDP 667 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~-~~p~~~~~~~------i~~~~~ppvLi~~G~~D~ 667 (736)
++++++|.|+||+.|.+++.++. ++ +|+..|.+.....+... +.+..-.++. ++....-..+++....|+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~~-aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~r~~vllq~gDE 136 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--IR-QVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDE 136 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--CC-EEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcccEEEEEeCCCc
Confidence 46999999999999999999875 33 56677777665432211 1110000111 221122236888999999
Q ss_pred CCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHH
Q 004690 668 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 722 (736)
Q Consensus 668 ~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~ 722 (736)
+..+.++.+.++.. .+.++. +|+.|.+.. -.+ ....+.+|+.
T Consensus 137 vLDyr~a~~~y~~~------y~~~v~---~GGdH~f~~-fe~---~l~~I~~F~~ 178 (180)
T PRK04940 137 VLDSQRTAEELHPY------YEIVWD---EEQTHKFKN-ISP---HLQRIKAFKT 178 (180)
T ss_pred ccCHHHHHHHhccC------ceEEEE---CCCCCCCCC-HHH---HHHHHHHHHh
Confidence 99998887666432 022333 488897742 222 2344778873
No 218
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.61 E-value=0.0001 Score=84.23 Aligned_cols=126 Identities=17% Similarity=0.190 Sum_probs=80.7
Q ss_pred EeEEEEEecCCccCCCCCcEEEEecCCCCcCCC-CCC--chhHHHHHHCCcEEEEEcccCCCCCChhhhhccc-cccCcC
Q 004690 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAF--NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK-FLKKKN 574 (736)
Q Consensus 499 i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~-~~~--~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~-~~~~~~ 574 (736)
+..-++.|+.. ..++ .|++|++|||.-.... ..+ ......+..+..+|+.++||-+ -+| |...+. ...+..
T Consensus 97 LylNV~tp~~~-~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG-~lG--F~st~d~~~~gN~ 171 (545)
T KOG1516|consen 97 LYLNVYTPQGC-SESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLG-PLG--FLSTGDSAAPGNL 171 (545)
T ss_pred ceEEEeccCCC-ccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccce-ece--eeecCCCCCCCcc
Confidence 55566777654 2223 8999999997432222 112 1222345566899999999964 122 111111 112445
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEcCCc
Q 004690 575 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPF 629 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~---~~~d~~ri~~~G~S~GG~la~~~~~~--~p~~~~a~v~~~p~ 629 (736)
.+.|.+.|++|+.++ -.-||++|.++|+|+||..+..++.. ...+|+.+|..+|.
T Consensus 172 gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 678999999999765 23599999999999999988776653 11467777776663
No 219
>PTZ00421 coronin; Provisional
Probab=97.59 E-value=0.013 Score=65.32 Aligned_cols=160 Identities=16% Similarity=0.155 Sum_probs=89.8
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-c-ccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
..+..+.|+|++..+..+.... ..|++||+++++.... . ..+....++|+|||.++++...+ ..|.++++
T Consensus 126 ~~V~~l~f~P~~~~iLaSgs~D----gtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D----g~IrIwD~ 197 (493)
T PTZ00421 126 KKVGIVSFHPSAMNVLASAGAD----MVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD----KKLNIIDP 197 (493)
T ss_pred CcEEEEEeCcCCCCEEEEEeCC----CEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC----CEEEEEEC
Confidence 3577899999975443343322 4699999999876542 1 12235569999999555554322 25778888
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecC-cceeEEEEEeCCCCC-ceEEeeccc-ccee-EEEeeeCCEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPE-ELRVLTPRV-VGVD-TAASHRGNHFF 344 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~-~~~~~l~~~dl~~~~-~~~~l~~~~-~~~~-~~~s~dg~~l~ 344 (736)
.++. ....+..........+.|.+++..|+....+ .....|.++|+.+.. ......... .... ..++++++.|+
T Consensus 198 rsg~--~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~ 275 (493)
T PTZ00421 198 RDGT--IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLY 275 (493)
T ss_pred CCCc--EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEE
Confidence 7652 2222222222222346688988876654422 334568888887644 222221111 1222 34788888777
Q ss_pred EEEcCCCCCCcEEEEEeCCC
Q 004690 345 ITRRSDELFNSELLACPVDN 364 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~~~ 364 (736)
.....+ ..|...++..
T Consensus 276 lggkgD----g~Iriwdl~~ 291 (493)
T PTZ00421 276 IGSKGE----GNIRCFELMN 291 (493)
T ss_pred EEEeCC----CeEEEEEeeC
Confidence 665333 2344455543
No 220
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=97.58 E-value=0.016 Score=57.75 Aligned_cols=148 Identities=18% Similarity=0.162 Sum_probs=83.7
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-ccc-CccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-GVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~-~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~ 272 (736)
..+||+-|.+||.+... | .+.|+|+.|-.+-.. ... ....+++||+||+++.++..+ ..+-++++-.+.
T Consensus 28 ~~~Fs~~G~~lAvGc~n-G----~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D----~si~lwDl~~gs 98 (405)
T KOG1273|consen 28 CCQFSRWGDYLAVGCAN-G----RVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRD----WSIKLWDLLKGS 98 (405)
T ss_pred eEEeccCcceeeeeccC-C----cEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCC----ceeEEEeccCCC
Confidence 46999999999998763 3 488999988654321 111 124569999999655555432 346677776652
Q ss_pred CCcEEEEeecCCceEEEEEEcCCc--cEEEEEecCcceeEEEEEeCCCCCceEEeecccccee---E---EEeeeCCEEE
Q 004690 273 SNDICLYHEKDDIYSLGLQASESK--KFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD---T---AASHRGNHFF 344 (736)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~S~Dg--~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~---~---~~s~dg~~l~ 344 (736)
.-....| ..+ .....|.|-. +.++...... -+++++..+. -+.|....++.. . .+.+.|++++
T Consensus 99 ~l~rirf--~sp--v~~~q~hp~k~n~~va~~~~~s----p~vi~~s~~~-h~~Lp~d~d~dln~sas~~~fdr~g~yIi 169 (405)
T KOG1273|consen 99 PLKRIRF--DSP--VWGAQWHPRKRNKCVATIMEES----PVVIDFSDPK-HSVLPKDDDGDLNSSASHGVFDRRGKYII 169 (405)
T ss_pred ceeEEEc--cCc--cceeeeccccCCeEEEEEecCC----cEEEEecCCc-eeeccCCCccccccccccccccCCCCEEE
Confidence 1112222 122 2245566644 3333333322 3677776654 444443333221 1 2667788776
Q ss_pred EEEcCCCCCCcEEEEEeCCCC
Q 004690 345 ITRRSDELFNSELLACPVDNT 365 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~~~~ 365 (736)
.-+.+ ++|..++.++.
T Consensus 170 tGtsK-----Gkllv~~a~t~ 185 (405)
T KOG1273|consen 170 TGTSK-----GKLLVYDAETL 185 (405)
T ss_pred EecCc-----ceEEEEecchh
Confidence 55443 56777777653
No 221
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.58 E-value=0.0096 Score=57.81 Aligned_cols=177 Identities=13% Similarity=0.096 Sum_probs=97.5
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQS 273 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~ 273 (736)
...|||||++++++-. .-.|-++|..+-++... ...-....+.|..++.+||.+...+ .|-...-..-
T Consensus 111 ~i~wsp~g~~~~~~~k-----dD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG----~v~ILsypsL-- 179 (313)
T KOG1407|consen 111 NITWSPDGEYIAVGNK-----DDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLG----CVEILSYPSL-- 179 (313)
T ss_pred EEEEcCCCCEEEEecC-----cccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCc----eEEEEecccc--
Confidence 5689999999998654 23577788877665542 2332345689997777777765321 1222222111
Q ss_pred CcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEEcCCCC
Q 004690 274 NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDEL 352 (736)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~ 352 (736)
+.+.-.. ..+.-.+-+.++|||||+++.+.+.- +-+.|++.--..+.+......+. ..||+||+.|+-.+.+
T Consensus 180 kpv~si~-AH~snCicI~f~p~GryfA~GsADAl---vSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSED--- 252 (313)
T KOG1407|consen 180 KPVQSIK-AHPSNCICIEFDPDGRYFATGSADAL---VSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASED--- 252 (313)
T ss_pred ccccccc-cCCcceEEEEECCCCceEeeccccce---eeccChhHhhhheeeccccCceEEEEeccCcceeeccCcc---
Confidence 1111111 12233345789999999998765532 23445432212345554444554 4599999976544332
Q ss_pred CCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEE
Q 004690 353 FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE 394 (736)
Q Consensus 353 ~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~ 394 (736)
.-|-...+.+ +..-|-++.... .-.+.|-.++.++.+
T Consensus 253 --h~IDIA~vet-Gd~~~eI~~~~~--t~tVAWHPk~~LLAy 289 (313)
T KOG1407|consen 253 --HFIDIAEVET-GDRVWEIPCEGP--TFTVAWHPKRPLLAY 289 (313)
T ss_pred --ceEEeEeccc-CCeEEEeeccCC--ceeEEecCCCceeeE
Confidence 2343444444 344565655433 346677776554444
No 222
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.54 E-value=0.01 Score=65.87 Aligned_cols=198 Identities=18% Similarity=0.214 Sum_probs=109.4
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCC--eecccccC---ccceeEEeeCCeEEEEEeCCCCCCceEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT--PVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAW 264 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~--~~~~~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~v~ 264 (736)
..++....+||||++++.+... ..+.++++.+++ ... .+.+ ....+.|+|||+++.+..++ ..++
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~-----~~i~~~~~~~~~~~~~~-~l~~h~~~v~~~~fs~d~~~l~s~s~D----~tir 228 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSD-----GLIRIWKLEGIKSNLLR-ELSGHTRGVSDVAFSPDGSYLLSGSDD----KTLR 228 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCC-----CcEEEeecccccchhhc-cccccccceeeeEECCCCcEEEEecCC----ceEE
Confidence 3456778999999998876542 357777776666 222 2222 25669999999644444433 3577
Q ss_pred EEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEE
Q 004690 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHF 343 (736)
Q Consensus 265 ~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l 343 (736)
.+++..+. .-..++. ....+...+.++|+|+ ++++..... .|.+.|+.+++..+.+.....++. ..++++|..|
T Consensus 229 iwd~~~~~-~~~~~l~-gH~~~v~~~~f~p~g~-~i~Sgs~D~--tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l 303 (456)
T KOG0266|consen 229 IWDLKDDG-RNLKTLK-GHSTYVTSVAFSPDGN-LLVSGSDDG--TVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLL 303 (456)
T ss_pred EeeccCCC-eEEEEec-CCCCceEEEEecCCCC-EEEEecCCC--cEEEEeccCCeEEEeeeccCCceEEEEECCCCCEE
Confidence 88883321 2233333 3344556788999995 444444333 356667776663344545555554 3488888866
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCce-eeEecCCCCc-eeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 344 FITRRSDELFNSELLACPVDNTSET-TVLIPHRESV-KLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~~~~~-~~l~~~~~~~-~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
+.. ..+ +.|...|+.+.... ...+...+.. .+..+.+..+..++...... ..+.+|++.
T Consensus 304 ~s~-s~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d-~~~~~w~l~ 364 (456)
T KOG0266|consen 304 VSA-SYD----GTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD-RTLKLWDLR 364 (456)
T ss_pred EEc-CCC----ccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC-CeEEEEEcc
Confidence 655 323 45677777653211 1122222222 23444444444333332222 236777776
No 223
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.50 E-value=0.00097 Score=67.03 Aligned_cols=197 Identities=18% Similarity=0.163 Sum_probs=105.7
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHH-HCCcE--EEEEcccCCC--CCChhhhhcc-------ccccCc-----ChHHH
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFI--FAIAQIRGGG--ELGRQWYENG-------KFLKKK-----NTFTD 578 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~--v~~~d~RG~g--~~g~~~~~~~-------~~~~~~-----~~~~D 578 (736)
.| .||+||..+. ...|..+...+. +.|.+ ++.+++--.| .....|.... ...... ....-
T Consensus 12 tP-TifihG~~gt--~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 12 TP-TIFIHGYGGT--ANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp EE-EEEE--TTGG--CCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred Cc-EEEECCCCCC--hhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 45 5778994444 345888888887 66543 4444443222 1111221110 011111 23455
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC------CCceeEEEEcCCccchhhhccC--------CCCCCc
Q 004690 579 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVLTTMLD--------PTIPLT 644 (736)
Q Consensus 579 ~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~------p~~~~a~v~~~p~~d~~~~~~~--------~~~p~~ 644 (736)
+..++.+|.++..+ +++-++||||||..+...+..+ |. +.-+|.+++.++-...... ...|..
T Consensus 89 l~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~-l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~ 165 (255)
T PF06028_consen 89 LKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPK-LNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKS 165 (255)
T ss_dssp HHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-E-EEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS
T ss_pred HHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcc-cceEEEeccccCccccccccchhhhhcccCCcc
Confidence 67788889888666 7999999999999998888763 33 4555555554443322111 001211
Q ss_pred -ccccc--ccc--c---ccccEEEeecC------CCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHH
Q 004690 645 -TAEWE--VKA--Q---NYPHILVTAGL------NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 710 (736)
Q Consensus 645 -~~~~~--i~~--~---~~ppvLi~~G~------~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 710 (736)
...|. +.. . ....||-+.|. .|-+||...++.+..-++......+.+.+. ..++.|.........
T Consensus 166 ~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~-G~~a~HS~LheN~~V 244 (255)
T PF06028_consen 166 MTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVT-GKDAQHSQLHENPQV 244 (255)
T ss_dssp --HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEE-SGGGSCCGGGCCHHH
T ss_pred cCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEE-CCCCccccCCCCHHH
Confidence 11122 111 1 22358999998 899999998887777776655555555665 124678765544444
Q ss_pred HHHHHHHHHHHH
Q 004690 711 LREAAFTYTFLM 722 (736)
Q Consensus 711 ~~~~a~~~~fl~ 722 (736)
.+. +..||.
T Consensus 245 ~~~---I~~FLw 253 (255)
T PF06028_consen 245 DKL---IIQFLW 253 (255)
T ss_dssp HHH---HHHHHC
T ss_pred HHH---HHHHhc
Confidence 433 456663
No 224
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=97.50 E-value=0.0021 Score=65.41 Aligned_cols=125 Identities=20% Similarity=0.174 Sum_probs=70.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
+-..++||||++|| .|+...++++||+.|..+.. +..+ -...++||||| .|+--..+ ..|.+++-
T Consensus 118 Vl~~~fsp~g~~l~-----tGsGD~TvR~WD~~TeTp~~-t~KgH~~WVlcvawsPDgk~iASG~~d-----g~I~lwdp 186 (480)
T KOG0271|consen 118 VLSVQFSPTGSRLV-----TGSGDTTVRLWDLDTETPLF-TCKGHKNWVLCVAWSPDGKKIASGSKD-----GSIRLWDP 186 (480)
T ss_pred EEEEEecCCCceEE-----ecCCCceEEeeccCCCCcce-eecCCccEEEEEEECCCcchhhccccC-----CeEEEecC
Confidence 44568999999998 35557899999999876543 3333 24569999999 56543333 34777776
Q ss_pred CCCCCCcEEEEeecCCceEEEEEE-----cCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQA-----SESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD 333 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~-----S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~ 333 (736)
.+++..-.. +.+ ...+...++| .|..++++ +++..++ +.+.|+..+....++......+.
T Consensus 187 ktg~~~g~~-l~g-H~K~It~Lawep~hl~p~~r~la-s~skDg~--vrIWd~~~~~~~~~lsgHT~~VT 251 (480)
T KOG0271|consen 187 KTGQQIGRA-LRG-HKKWITALAWEPLHLVPPCRRLA-SSSKDGS--VRIWDTKLGTCVRTLSGHTASVT 251 (480)
T ss_pred CCCCccccc-ccC-cccceeEEeecccccCCCcccee-cccCCCC--EEEEEccCceEEEEeccCccceE
Confidence 665432111 211 2234445555 55666443 2222233 34445544332334444444433
No 225
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.49 E-value=0.016 Score=62.13 Aligned_cols=175 Identities=17% Similarity=0.191 Sum_probs=92.1
Q ss_pred EEEEEECCCCCeecc-cc-cCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCC
Q 004690 218 TVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES 295 (736)
Q Consensus 218 ~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~D 295 (736)
.|.|+|.++.+.+.. .. ......+.++|||+.+|+...+ ..|..+++.+.+ ++-+-.-.....+++.|+|
T Consensus 17 ~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rd----g~vsviD~~~~~----~v~~i~~G~~~~~i~~s~D 88 (369)
T PF02239_consen 17 SVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRD----GTVSVIDLATGK----VVATIKVGGNPRGIAVSPD 88 (369)
T ss_dssp EEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETT----SEEEEEETTSSS----EEEEEE-SSEEEEEEE--T
T ss_pred EEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCC----CeEEEEECCccc----EEEEEecCCCcceEEEcCC
Confidence 699999999887753 22 2234557899999666666532 358888998863 2222122223346789999
Q ss_pred ccEEEEEecCcceeEEEEEeCCCCCceEEeecc-c------cceeE-EEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004690 296 KKFLFIASESKITRFVFYLDVSKPEELRVLTPR-V------VGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (736)
Q Consensus 296 g~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~-~------~~~~~-~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~ 367 (736)
|+++++.... ...+.++|.++.+..+.+... . ..+.. ..+|.+..+++... + ..+++.+|......
T Consensus 89 G~~~~v~n~~--~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lk-d---~~~I~vVdy~d~~~ 162 (369)
T PF02239_consen 89 GKYVYVANYE--PGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLK-D---TGEIWVVDYSDPKN 162 (369)
T ss_dssp TTEEEEEEEE--TTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEET-T---TTEEEEEETTTSSC
T ss_pred CCEEEEEecC--CCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEc-c---CCeEEEEEeccccc
Confidence 9999875432 346788898887622222111 0 01111 23555554444433 3 35788888765422
Q ss_pred ee-eEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 368 TT-VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 368 ~~-~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
.. ..+.. ...+.+..++.++-++....++...+.+++..
T Consensus 163 ~~~~~i~~--g~~~~D~~~dpdgry~~va~~~sn~i~viD~~ 202 (369)
T PF02239_consen 163 LKVTTIKV--GRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK 202 (369)
T ss_dssp EEEEEEE----TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT
T ss_pred cceeeecc--cccccccccCcccceeeecccccceeEEEeec
Confidence 21 12222 23466777776654444445555678777765
No 226
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.47 E-value=0.033 Score=57.82 Aligned_cols=231 Identities=13% Similarity=0.061 Sum_probs=126.1
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSN 274 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~ 274 (736)
++.|-|+++.|.|. |..| ..|+-+|.++|+......++..++...-.++..+++.... +++.+..++ .
T Consensus 29 gP~w~~~~~~L~w~-DI~~---~~i~r~~~~~g~~~~~~~p~~~~~~~~~d~~g~Lv~~~~g------~~~~~~~~~--~ 96 (307)
T COG3386 29 GPVWDPDRGALLWV-DILG---GRIHRLDPETGKKRVFPSPGGFSSGALIDAGGRLIACEHG------VRLLDPDTG--G 96 (307)
T ss_pred CccCcCCCCEEEEE-eCCC---CeEEEecCCcCceEEEECCCCcccceeecCCCeEEEEccc------cEEEeccCC--c
Confidence 47999999988554 4444 3689999998877665555554445555555344444322 445555333 1
Q ss_pred c-EEEEeecC---CceEEEEEEcCCccEEEEEec-----C---cceeEEEEEeCCCCCceEEeeccccce-eEEEeeeCC
Q 004690 275 D-ICLYHEKD---DIYSLGLQASESKKFLFIASE-----S---KITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGN 341 (736)
Q Consensus 275 ~-~~~~~~~~---~~~~~~~~~S~Dg~~l~~~~~-----~---~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~ 341 (736)
- .++.+..+ ....-+....|||++-+=... . .....||+++..+.. .+++....... ...|||||+
T Consensus 97 ~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~-~~l~~~~~~~~NGla~SpDg~ 175 (307)
T COG3386 97 KITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGV-VRLLDDDLTIPNGLAFSPDGK 175 (307)
T ss_pred eeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCE-EEeecCcEEecCceEECCCCC
Confidence 2 22222111 111124556889876443333 1 122379999975543 44443321111 134999999
Q ss_pred EEEEEEcCCCCCCcEEEEEeCCC---CC-cee-eEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCcccc
Q 004690 342 HFFITRRSDELFNSELLACPVDN---TS-ETT-VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKS 416 (736)
Q Consensus 342 ~l~~~t~~~~~~~~~l~~~~~~~---~~-~~~-~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~ 416 (736)
.||+.-.. ..+|++++++. .. ... .+.-..+.....++..+.++.+.+....+-..|.+++.+ |+.+
T Consensus 176 tly~aDT~----~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd--G~l~-- 247 (307)
T COG3386 176 TLYVADTP----ANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD--GKLL-- 247 (307)
T ss_pred EEEEEeCC----CCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC--CcEE--
Confidence 88877443 46899988762 11 111 232222344567888888766553333332456667655 6543
Q ss_pred ccCCceeeecCcccccCCCCcccC---cceEEEEeccCCCC
Q 004690 417 LQGGKSVEFIDPVYSIDPSESVFS---SRILRFHYSSLRTP 454 (736)
Q Consensus 417 l~~~~~i~~p~~~~~v~~~~~~~~---~~~~~~~~ss~~~P 454 (736)
..+.+|.... .+..+. .++++++......+
T Consensus 248 ----~~i~lP~~~~----t~~~FgG~~~~~L~iTs~~~~~~ 280 (307)
T COG3386 248 ----GEIKLPVKRP----TNPAFGGPDLNTLYITSARSGMS 280 (307)
T ss_pred ----EEEECCCCCC----ccceEeCCCcCEEEEEecCCCCC
Confidence 4566764221 223333 46777776666555
No 227
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.45 E-value=0.041 Score=61.08 Aligned_cols=239 Identities=12% Similarity=0.080 Sum_probs=133.7
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc---cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~---~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~ 267 (736)
..+..+.|+--|.+|||....-| +|-||+..+...+-. .... ...++.||||+++.+..++. +|..++
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klg----QLlVweWqsEsYVlKQQgH~~~-i~~l~YSpDgq~iaTG~eDg----KVKvWn 378 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLG----QLLVWEWQSESYVLKQQGHSDR-ITSLAYSPDGQLIATGAEDG----KVKVWN 378 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccc----eEEEEEeeccceeeeccccccc-eeeEEECCCCcEEEeccCCC----cEEEEe
Confidence 34667788888999999887655 677877776554321 2222 34589999997666655442 577777
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccc-e-eEEEeeeCCEEEE
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-V-DTAASHRGNHFFI 345 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~-~~~~s~dg~~l~~ 345 (736)
..++ -=...|++.... ...+.|+.+|+.|+-.+-+++ |...|+......+.++...+- . ...++|.|. |++
T Consensus 379 ~~Sg--fC~vTFteHts~-Vt~v~f~~~g~~llssSLDGt---VRAwDlkRYrNfRTft~P~p~QfscvavD~sGe-lV~ 451 (893)
T KOG0291|consen 379 TQSG--FCFVTFTEHTSG-VTAVQFTARGNVLLSSSLDGT---VRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGE-LVC 451 (893)
T ss_pred ccCc--eEEEEeccCCCc-eEEEEEEecCCEEEEeecCCe---EEeeeecccceeeeecCCCceeeeEEEEcCCCC-EEE
Confidence 7654 223445554332 335789999988765554433 334455443224444432211 1 123556576 556
Q ss_pred EEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeee
Q 004690 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 425 (736)
Q Consensus 346 ~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~ 425 (736)
....+ .+.|++.++.++.....+-.++..+.-..|.+.++.|+-...+.. +++|++=...+. .+.+..
T Consensus 452 AG~~d---~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT---VRiW~if~s~~~------vEtl~i 519 (893)
T KOG0291|consen 452 AGAQD---SFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKT---VRIWDIFSSSGT------VETLEI 519 (893)
T ss_pred eeccc---eEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccce---EEEEEeeccCce------eeeEee
Confidence 55554 689999998873222223334333333357777775554444433 566766422211 133433
Q ss_pred cCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCC
Q 004690 426 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 464 (736)
Q Consensus 426 p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~ 464 (736)
.. .+..+...+++..+.++.. -+++-.+|...
T Consensus 520 ~s---dvl~vsfrPdG~elaVaTl----dgqItf~d~~~ 551 (893)
T KOG0291|consen 520 RS---DVLAVSFRPDGKELAVATL----DGQITFFDIKE 551 (893)
T ss_pred cc---ceeEEEEcCCCCeEEEEEe----cceEEEEEhhh
Confidence 22 2334556777888766533 24555566543
No 228
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=97.40 E-value=0.0018 Score=66.65 Aligned_cols=192 Identities=15% Similarity=0.131 Sum_probs=106.7
Q ss_pred EEEeeEEECCC--CCEEEEEEeCCCCcEEEEEEEECCCCCeecc-ccc-CccceeEEeeCC-eEEEEEeCCCCCCceEEE
Q 004690 191 YSVGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (736)
Q Consensus 191 ~~~~~~~~SPD--G~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~-~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~ 265 (736)
..++.+.|+|. +.-||- ....| .+.+|++++...+.+ +.. ...+.++|.|+| .|.-.++|.+++ +
T Consensus 218 ~~v~~~~fhP~~~~~~lat-~s~Dg----tvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWR-----l 287 (459)
T KOG0272|consen 218 SRVGAAVFHPVDSDLNLAT-ASADG----TVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWR-----L 287 (459)
T ss_pred cceeeEEEccCCCccceee-eccCC----ceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchh-----h
Confidence 45889999997 545553 22334 588889887666542 221 236779999999 455555566543 4
Q ss_pred EEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEE
Q 004690 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFF 344 (736)
Q Consensus 266 ~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~ 344 (736)
+++.++ .++++.+....-..+++|.+||..++- ..-....+ +.|+.+|.....|......+. ..|+|+|-+|+
T Consensus 288 WD~~tk---~ElL~QEGHs~~v~~iaf~~DGSL~~t-GGlD~~~R--vWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lA 361 (459)
T KOG0272|consen 288 WDLETK---SELLLQEGHSKGVFSIAFQPDGSLAAT-GGLDSLGR--VWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLA 361 (459)
T ss_pred cccccc---hhhHhhcccccccceeEecCCCceeec-cCccchhh--eeecccCcEEEEecccccceeeEeECCCceEEe
Confidence 477765 345555554444457899999985543 22222334 447777652333334333332 34999987665
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEe--CCEEEEEEEeCCeeEEEEEEc
Q 004690 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRL 407 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~v~~l 407 (736)
--+.++ ..+|+.+.... .. -++|...+ .+..+... .++.++....+.. +.+|.-
T Consensus 362 Tgs~Dn---t~kVWDLR~r~--~l-y~ipAH~n-lVS~Vk~~p~~g~fL~TasyD~t--~kiWs~ 417 (459)
T KOG0272|consen 362 TGSSDN---TCKVWDLRMRS--EL-YTIPAHSN-LVSQVKYSPQEGYFLVTASYDNT--VKIWST 417 (459)
T ss_pred ecCCCC---cEEEeeecccc--cc-eecccccc-hhhheEecccCCeEEEEcccCcc--eeeecC
Confidence 444332 34555443222 21 24443322 23344433 4556666666665 444543
No 229
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.37 E-value=0.02 Score=60.64 Aligned_cols=215 Identities=12% Similarity=0.123 Sum_probs=127.8
Q ss_pred CceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc---c-CccceeEEeeCC--
Q 004690 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---V-GVTASVEWAGNE-- 247 (736)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~---~-~~~~~~~WspDg-- 247 (736)
.+.+++--+..++. +..-...+||-|.+++|+.+ | ..|+|.++ |+..-...+ . .....++|||-|
T Consensus 117 sg~iv~sf~~~~q~--~~~Wp~~k~s~~D~y~ARvv---~---~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~ 187 (561)
T COG5354 117 SGMIVFSFNGISQP--YLGWPVLKFSIDDKYVARVV---G---SSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNH 187 (561)
T ss_pred CceeEeeccccCCc--ccccceeeeeecchhhhhhc---c---CeEEEEec-CCccccCchhhccccceeeEEecCCCCC
Confidence 34566555544432 11112468999999999885 3 35888887 555433222 1 224568999986
Q ss_pred -eEEEEEeCCCCCCceEEEEEcCCCCCC-cEEEEeecCCceEEEEEEcCCccEEEEEecCc--------ceeEEEEEeCC
Q 004690 248 -ALVYITMDEILRPDKAWLHKLEADQSN-DICLYHEKDDIYSLGLQASESKKFLFIASESK--------ITRFVFYLDVS 317 (736)
Q Consensus 248 -~l~y~~~~~~~~~~~v~~~~l~t~~~~-~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~--------~~~~l~~~dl~ 317 (736)
.|+|.+-...+.+..+..+.|...... ...++.-. .+.+.|.+.|++|++..... +.+.||++++.
T Consensus 188 ~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~----~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~ 263 (561)
T COG5354 188 DELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVS----GVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT 263 (561)
T ss_pred ceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeec----ccEEEEecCCceEEEEEEEeeecccceeccceEEEEeec
Confidence 578877666677888888888744111 11122211 23577999999998866321 33789999987
Q ss_pred CCCceEEeeccccce-eEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEe
Q 004690 318 KPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYERE 396 (736)
Q Consensus 318 ~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~ 396 (736)
... .+......+-+ ++.|+|+++++.+++... ...+...++.+ ...-.+++...-. .-|++...++++..-.
T Consensus 264 e~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~---pa~~s~~~lr~--Nl~~~~Pe~~rNT-~~fsp~~r~il~agF~ 336 (561)
T COG5354 264 ERS-IPVEKDLKDPVHDFTWEPLSSRFAVISGYM---PASVSVFDLRG--NLRFYFPEQKRNT-IFFSPHERYILFAGFD 336 (561)
T ss_pred ccc-cceeccccccceeeeecccCCceeEEeccc---ccceeeccccc--ceEEecCCccccc-ccccCcccEEEEecCC
Confidence 554 33332222223 466999999999988543 23455555544 2222444443322 2456666777776666
Q ss_pred CCeeEEEEEEcC
Q 004690 397 GGLQKITTYRLP 408 (736)
Q Consensus 397 ~g~~~l~v~~l~ 408 (736)
+-...+.+++..
T Consensus 337 nl~gni~i~~~~ 348 (561)
T COG5354 337 NLQGNIEIFDPA 348 (561)
T ss_pred ccccceEEeccC
Confidence 555566666654
No 230
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=97.35 E-value=0.00097 Score=67.70 Aligned_cols=94 Identities=16% Similarity=0.150 Sum_probs=61.2
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeCCeEEEEEeCCCCCCceEEEEEcC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
+..+.+||||++||-.+- ...+.+||-.+|+.+. ++.+ ....++||.|.+|+.....+. .|-.+++.
T Consensus 370 Vn~V~fSPd~r~IASaSF-----DkSVkLW~g~tGk~la-sfRGHv~~VYqvawsaDsRLlVS~SkDs----TLKvw~V~ 439 (480)
T KOG0271|consen 370 VNHVSFSPDGRYIASASF-----DKSVKLWDGRTGKFLA-SFRGHVAAVYQVAWSADSRLLVSGSKDS----TLKVWDVR 439 (480)
T ss_pred eeeEEECCCccEEEEeec-----ccceeeeeCCCcchhh-hhhhccceeEEEEeccCccEEEEcCCCc----eEEEEEee
Confidence 667899999999996554 3469999999999876 3332 245589999998877765432 24444554
Q ss_pred CCCCCcEEEEeec-CCceEEEEEEcCCccEEE
Q 004690 270 ADQSNDICLYHEK-DDIYSLGLQASESKKFLF 300 (736)
Q Consensus 270 t~~~~~~~~~~~~-~~~~~~~~~~S~Dg~~l~ 300 (736)
+.. +.++-+ ..+-...+.|||||+.++
T Consensus 440 tkK----l~~DLpGh~DEVf~vDwspDG~rV~ 467 (480)
T KOG0271|consen 440 TKK----LKQDLPGHADEVFAVDWSPDGQRVA 467 (480)
T ss_pred eee----ecccCCCCCceEEEEEecCCCceee
Confidence 431 112111 111122578999999865
No 231
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=97.32 E-value=0.0055 Score=68.02 Aligned_cols=192 Identities=15% Similarity=0.126 Sum_probs=110.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCc-cceeEEeeCCeEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-TASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~-~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+-+.++|||.++|. ..+|...+++|.+.+..-+.. ..... ...+.|+|-| +||.+. ..++-.+||..+-
T Consensus 454 Vyg~sFsPd~rfLl-----ScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G-yYFata-s~D~tArLWs~d~-- 524 (707)
T KOG0263|consen 454 VYGCSFSPDRRFLL-----SCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG-YYFATA-SHDQTARLWSTDH-- 524 (707)
T ss_pred eeeeeeccccccee-----eccCCcceeeeecccceeEEEecCCCcceeeEEecCCc-eEEEec-CCCceeeeeeccc--
Confidence 67789999999886 344567889999988765442 21111 3446788887 333332 2233345665432
Q ss_pred CCCCcEEEEeecCCceEEE-EEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeE-EEeeeCCEEEEEEc
Q 004690 271 DQSNDICLYHEKDDIYSLG-LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRR 348 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~-~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~ 348 (736)
. .+..+|.+.-.+ ++ +.+.|+..|++-.+.+. .+.+.|..+|...+.++.+..-+.. .+||+|++|.-..
T Consensus 525 ~--~PlRifaghlsD--V~cv~FHPNs~Y~aTGSsD~---tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~- 596 (707)
T KOG0263|consen 525 N--KPLRIFAGHLSD--VDCVSFHPNSNYVATGSSDR---TVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGD- 596 (707)
T ss_pred C--Cchhhhcccccc--cceEEECCcccccccCCCCc---eEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecc-
Confidence 2 355666544222 23 57899999987553332 3456677776635555555555543 4999998765332
Q ss_pred CCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 349 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
..+.|...|+.+......+..+.. .+.++++..++-++... .+...+.+|++.
T Consensus 597 ----ed~~I~iWDl~~~~~v~~l~~Ht~--ti~SlsFS~dg~vLasg-g~DnsV~lWD~~ 649 (707)
T KOG0263|consen 597 ----EDGLIKIWDLANGSLVKQLKGHTG--TIYSLSFSRDGNVLASG-GADNSVRLWDLT 649 (707)
T ss_pred ----cCCcEEEEEcCCCcchhhhhcccC--ceeEEEEecCCCEEEec-CCCCeEEEEEch
Confidence 235677888876322222455532 34555555544443333 223457788875
No 232
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.29 E-value=0.022 Score=57.72 Aligned_cols=152 Identities=16% Similarity=0.055 Sum_probs=85.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
.+..+++||||+.+|+.....+ ...|++....+......... ....++|+++|.+++..... ....+++ +..++
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~--~~~L~~~~~~~~~~~~~~g~-~l~~PS~d~~g~~W~v~~~~--~~~~~~~-~~~~g 98 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDG--GRSLYVGPAGGPVRPVLTGG-SLTRPSWDPDGWVWTVDDGS--GGVRVVR-DSASG 98 (253)
T ss_pred cccceEECCCCCeEEEEEEcCC--CCEEEEEcCCCcceeeccCC-ccccccccCCCCEEEEEcCC--CceEEEE-ecCCC
Confidence 4677899999999999983333 57899988765444332222 35569999999766655422 1122222 22222
Q ss_pred CCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCC---CCC-----ceEEeecc-ccce-eEEEeeeCC
Q 004690 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS---KPE-----ELRVLTPR-VVGV-DTAASHRGN 341 (736)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~---~~~-----~~~~l~~~-~~~~-~~~~s~dg~ 341 (736)
......+--.....-...+.+||||..+++.....+..+||+.-+. ++. .+..+... ...+ ...|..++
T Consensus 99 ~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~- 177 (253)
T PF10647_consen 99 TGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDS- 177 (253)
T ss_pred cceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCC-
Confidence 2122222111111134478899999999998877666788876443 221 11122211 1222 34587765
Q ss_pred EEEEEEcCC
Q 004690 342 HFFITRRSD 350 (736)
Q Consensus 342 ~l~~~t~~~ 350 (736)
.|++++...
T Consensus 178 ~L~V~~~~~ 186 (253)
T PF10647_consen 178 TLVVLGRSA 186 (253)
T ss_pred EEEEEeCCC
Confidence 477776655
No 233
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.29 E-value=0.0003 Score=73.85 Aligned_cols=114 Identities=13% Similarity=0.095 Sum_probs=62.9
Q ss_pred CCCCcEEEEecCCCCcCCCCCCc-hhHHHHHH---CCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHH
Q 004690 513 DGSDPLLLYGYGSYEICNDPAFN-SSRLSLLD---RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (736)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~-~~~~~l~~---~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (736)
+...|++|++||..+......|. .....+.. ..+.|+++|....... .+..+.... ...-..+...+..|.+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~--~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANT--RLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhhH--HHHHHHHHHHHHHHHh
Confidence 45689999999955544233333 33444554 4899999998642221 122111110 1112344455777775
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhCCC--ceeEEEEcCCcc
Q 004690 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVPFV 630 (736)
Q Consensus 589 ~~~~d~~ri~~~G~S~GG~la~~~~~~~p~--~~~a~v~~~p~~ 630 (736)
...+++++|-|+|||+||++++.++..-.. .+..+...-|.-
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 555788999999999999999999987655 566666666543
No 234
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.29 E-value=0.04 Score=55.13 Aligned_cols=156 Identities=13% Similarity=0.196 Sum_probs=87.9
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcC
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
-.|.....||-+....- ++...+|++||+...+-+.. ...+ ..-.++.|.|-++-+... .. .|.++++.
T Consensus 101 ~~V~sL~~sP~~d~FlS-----~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~-~~---~IkLyD~R 170 (311)
T KOG1446|consen 101 KRVNSLSVSPKDDTFLS-----SSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANG-SE---LIKLYDLR 170 (311)
T ss_pred ceEEEEEecCCCCeEEe-----cccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecC-CC---eEEEEEec
Confidence 35778888997765432 33345899999986554332 1221 223688898833333332 21 35555554
Q ss_pred CCCCCcEEEE--eecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEE-ee--ccccc--eeEEEeeeCCE
Q 004690 270 ADQSNDICLY--HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LT--PRVVG--VDTAASHRGNH 342 (736)
Q Consensus 270 t~~~~~~~~~--~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-l~--~~~~~--~~~~~s~dg~~ 342 (736)
.=.+.+-..+ ..++..-+-.+.+|||||+|+++.+. +.++++|.=+|. ... +. +.... .+..++|||+.
T Consensus 171 s~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~---s~~~~lDAf~G~-~~~tfs~~~~~~~~~~~a~ftPds~F 246 (311)
T KOG1446|consen 171 SFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA---SFIYLLDAFDGT-VKSTFSGYPNAGNLPLSATFTPDSKF 246 (311)
T ss_pred ccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC---CcEEEEEccCCc-EeeeEeeccCCCCcceeEEECCCCcE
Confidence 3222232233 22222223478899999999997644 457899988876 221 11 22111 24568999885
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCC
Q 004690 343 FFITRRSDELFNSELLACPVDNT 365 (736)
Q Consensus 343 l~~~t~~~~~~~~~l~~~~~~~~ 365 (736)
++ ....+ ++|...+++++
T Consensus 247 vl-~gs~d----g~i~vw~~~tg 264 (311)
T KOG1446|consen 247 VL-SGSDD----GTIHVWNLETG 264 (311)
T ss_pred EE-EecCC----CcEEEEEcCCC
Confidence 44 33333 56777777663
No 235
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.28 E-value=0.0011 Score=66.12 Aligned_cols=140 Identities=16% Similarity=0.153 Sum_probs=82.2
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHCCc--EEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 591 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 591 (736)
....++||+|| |+..........++.....|+ .++.+..+..|..-. |.... ..-..+-.++...++.|.+..
T Consensus 16 ~~~~vlvfVHG-yn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~-Y~~d~--~~a~~s~~~l~~~L~~L~~~~- 90 (233)
T PF05990_consen 16 PDKEVLVFVHG-YNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLG-YFYDR--ESARFSGPALARFLRDLARAP- 90 (233)
T ss_pred CCCeEEEEEeC-CCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhh-hhhhh--hhHHHHHHHHHHHHHHHHhcc-
Confidence 35679999999 655433322233333333344 788888887664221 22111 111233456666677776652
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHh----CC-----CceeEEEEcCCccchhhhccCCCCCCccccccccccccccEEEee
Q 004690 592 CTKEKLCIEGRSAGGLLIGAVLNM----RP-----DLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTA 662 (736)
Q Consensus 592 ~d~~ri~~~G~S~GG~la~~~~~~----~p-----~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~ 662 (736)
...+|-|++||||+.+++.++.+ .+ ..|..+|+.+|-+|...+..... . +.. ...++.|.+
T Consensus 91 -~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~-~-------~~~-~~~~itvy~ 160 (233)
T PF05990_consen 91 -GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLP-D-------LGS-SARRITVYY 160 (233)
T ss_pred -CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHH-H-------Hhh-cCCCEEEEE
Confidence 34799999999999998877643 21 25778888888777533221100 0 111 235588999
Q ss_pred cCCCCC
Q 004690 663 GLNDPR 668 (736)
Q Consensus 663 G~~D~~ 668 (736)
..+|..
T Consensus 161 s~~D~A 166 (233)
T PF05990_consen 161 SRNDRA 166 (233)
T ss_pred cCCchH
Confidence 999853
No 236
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=97.27 E-value=0.084 Score=51.79 Aligned_cols=193 Identities=15% Similarity=0.119 Sum_probs=101.0
Q ss_pred EEeeEEECCC-CCEEEEEEeCCCCcEEEEEEEECCCCCeecc--ccc----CccceeEEeeCC-eEEEEEeCCCCCCceE
Q 004690 192 SVGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLV----GVTASVEWAGNE-ALVYITMDEILRPDKA 263 (736)
Q Consensus 192 ~~~~~~~SPD-G~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~----~~~~~~~WspDg-~l~y~~~~~~~~~~~v 263 (736)
.+-.++|+|- |..||- ++....|+++++.++..... .+. ....+++|+|.| .|+-.++|.. +
T Consensus 16 r~W~~awhp~~g~ilAs-----cg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t-----~ 85 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILAS-----CGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT-----V 85 (312)
T ss_pred cEEEEEeccCCceEEEe-----ecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce-----E
Confidence 4667899998 886652 33356899999886443221 221 235569999999 4555555542 2
Q ss_pred EEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCC-C--ceEEeeccccceeE-EEeee
Q 004690 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP-E--ELRVLTPRVVGVDT-AASHR 339 (736)
Q Consensus 264 ~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~-~--~~~~l~~~~~~~~~-~~s~d 339 (736)
.++.=..+.=+-+..+++.. .-.-.++||++|++|+--+.+ ..+|+...+.+ + ....|.+...++.. .|.|.
T Consensus 86 ~Iw~k~~~efecv~~lEGHE-nEVK~Vaws~sG~~LATCSRD---KSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt 161 (312)
T KOG0645|consen 86 VIWKKEDGEFECVATLEGHE-NEVKCVAWSASGNYLATCSRD---KSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT 161 (312)
T ss_pred EEeecCCCceeEEeeeeccc-cceeEEEEcCCCCEEEEeeCC---CeEEEEEecCCCcEEEEeeeccccccccEEEEcCC
Confidence 22221222112233333332 222368899999999865533 34666665543 3 23345666666654 47675
Q ss_pred CCEEEEEEcCCCCCCcEEEEEeCCCCCceee--EecCCC-CceeeeEEEeCCEEEEEEEeCCeeEEEE
Q 004690 340 GNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRE-SVKLQDIQLFIDHLAVYEREGGLQKITT 404 (736)
Q Consensus 340 g~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~--l~~~~~-~~~i~~~~~~~~~l~~~~~~~g~~~l~v 404 (736)
.+ |+|...-+. ..++|+-..++ .... .+.... .+-...|...+++++ ...+++.-+|+.
T Consensus 162 ~d-lL~S~SYDn--TIk~~~~~~dd--dW~c~~tl~g~~~TVW~~~F~~~G~rl~-s~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 162 ED-LLFSCSYDN--TIKVYRDEDDD--DWECVQTLDGHENTVWSLAFDNIGSRLV-SCSDDGTVSIWR 223 (312)
T ss_pred cc-eeEEeccCC--eEEEEeecCCC--CeeEEEEecCccceEEEEEecCCCceEE-EecCCcceEeee
Confidence 55 555555542 45677655322 1111 222222 223334444444554 555566544433
No 237
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=97.24 E-value=0.093 Score=51.47 Aligned_cols=153 Identities=17% Similarity=0.173 Sum_probs=86.7
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCc---cceeEEeeCC-eEEEEEeCCCCCCceEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV---TASVEWAGNE-ALVYITMDEILRPDKAW 264 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~---~~~~~WspDg-~l~y~~~~~~~~~~~v~ 264 (736)
..++..++|||.|++||-.+- ..+..|+.-..++..-. ++++. .-.++||++| .|+-.+.|. .||
T Consensus 61 krsVRsvAwsp~g~~La~aSF-----D~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK-----SVW 130 (312)
T KOG0645|consen 61 KRSVRSVAWSPHGRYLASASF-----DATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDK-----SVW 130 (312)
T ss_pred hheeeeeeecCCCcEEEEeec-----cceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCC-----eEE
Confidence 457899999999999986654 34566666566665432 44432 3358999999 555444433 599
Q ss_pred EEEcCCCCCCc-EEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEee---cccccee-EEEeee
Q 004690 265 LHKLEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT---PRVVGVD-TAASHR 339 (736)
Q Consensus 265 ~~~l~t~~~~~-~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~---~~~~~~~-~~~s~d 339 (736)
.+.+..+.+-+ .-++++.-... -.+.|.|-.. |+++.+-.++-.+|.-+. +.. +.++. .....+- ..|++.
T Consensus 131 iWe~deddEfec~aVL~~HtqDV-K~V~WHPt~d-lL~S~SYDnTIk~~~~~~-ddd-W~c~~tl~g~~~TVW~~~F~~~ 206 (312)
T KOG0645|consen 131 IWEIDEDDEFECIAVLQEHTQDV-KHVIWHPTED-LLFSCSYDNTIKVYRDED-DDD-WECVQTLDGHENTVWSLAFDNI 206 (312)
T ss_pred EEEecCCCcEEEEeeeccccccc-cEEEEcCCcc-eeEEeccCCeEEEEeecC-CCC-eeEEEEecCccceEEEEEecCC
Confidence 99887552211 12333321111 1356888654 445554444555665443 333 44433 2222222 237788
Q ss_pred CCEEEEEEcCCCCCCcEEEE
Q 004690 340 GNHFFITRRSDELFNSELLA 359 (736)
Q Consensus 340 g~~l~~~t~~~~~~~~~l~~ 359 (736)
|.+|.-.++.. .-+|++
T Consensus 207 G~rl~s~sdD~---tv~Iw~ 223 (312)
T KOG0645|consen 207 GSRLVSCSDDG---TVSIWR 223 (312)
T ss_pred CceEEEecCCc---ceEeee
Confidence 88877666543 456766
No 238
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.23 E-value=0.0045 Score=58.64 Aligned_cols=105 Identities=16% Similarity=0.125 Sum_probs=74.0
Q ss_pred EEEEecCCCCcCC--CCCCchhHHHHHHCCcEEEEEcccCCC-CCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 518 LLLYGYGSYEICN--DPAFNSSRLSLLDRGFIFAIAQIRGGG-ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 518 ~vl~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~d~RG~g-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
.|||+ ||-+... .+.-.....+|-+.+|..+.+-.|.+- ++|. ..-+...+|+..+++++...++.
T Consensus 38 ~vvfi-GGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt--------~slk~D~edl~~l~~Hi~~~~fS-- 106 (299)
T KOG4840|consen 38 KVVFI-GGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGT--------FSLKDDVEDLKCLLEHIQLCGFS-- 106 (299)
T ss_pred EEEEE-cccCCCccccccHHHHHHHHhhccceeeeeecccccccccc--------ccccccHHHHHHHHHHhhccCcc--
Confidence 44554 5444432 233344556788889999999888542 2432 12234568999999999887764
Q ss_pred CcEEEEEeChHHHHHHHHHHh--CCCceeEEEEcCCccchh
Q 004690 595 EKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVDVL 633 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~--~p~~~~a~v~~~p~~d~~ 633 (736)
..|.++|||-|..=++..+++ .|..++|+|+.+|+.|..
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 489999999999887777743 355688999999998854
No 239
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=97.23 E-value=0.17 Score=53.86 Aligned_cols=256 Identities=14% Similarity=0.105 Sum_probs=137.0
Q ss_pred cchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCee-----cc-cccC-ccceeEEeeCC-eEEEE
Q 004690 181 ENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GK-PLVG-VTASVEWAGNE-ALVYI 252 (736)
Q Consensus 181 ~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~-----~~-~~~~-~~~~~~WspDg-~l~y~ 252 (736)
.+++.-.+|...+...++-|.|-+++ .|+-.|++.+||+.+-... .+ ..+. ...++.||+.| .|+.+
T Consensus 158 shEi~l~hgtk~Vsal~~Dp~GaR~~-----sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvv 232 (641)
T KOG0772|consen 158 SHEIQLKHGTKIVSALAVDPSGARFV-----SGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVV 232 (641)
T ss_pred cceEeccCCceEEEEeeecCCCceee-----eccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEE
Confidence 34443456788899999999999987 4666799999999875432 22 2232 25569999999 77776
Q ss_pred EeCCCCCCceEEEEEcCCCCCCcEEEEeecC----------C--ceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 253 TMDEILRPDKAWLHKLEADQSNDICLYHEKD----------D--IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 253 ~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~----------~--~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
+... +..+++.++- ...-+...| . .......|.|+.+..+++++..++-+||-++-....
T Consensus 233 sg~a-----qakl~DRdG~---~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q 304 (641)
T KOG0772|consen 233 SGSA-----QAKLLDRDGF---EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ 304 (641)
T ss_pred ecCc-----ceeEEccCCc---eeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhh
Confidence 5432 1222232221 011110000 0 111234699999999999888888788876654433
Q ss_pred ceEEeeccccc------eeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceee--E--ecCCCCceeeeEEEeCCEE
Q 004690 321 ELRVLTPRVVG------VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--L--IPHRESVKLQDIQLFIDHL 390 (736)
Q Consensus 321 ~~~~l~~~~~~------~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~--l--~~~~~~~~i~~~~~~~~~l 390 (736)
.+.+.+...+ ..+.|++||.+|+-... ++.|-..+..+. ..+. . -++.....+..+.++.++-
T Consensus 305 -~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~-----DGSIQ~W~~~~~-~v~p~~~vk~AH~~g~~Itsi~FS~dg~ 377 (641)
T KOG0772|consen 305 -LQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCL-----DGSIQIWDKGSR-TVRPVMKVKDAHLPGQDITSISFSYDGN 377 (641)
T ss_pred -eeEEeeccCCCcccCceeeecCCCcchhhhccc-----CCceeeeecCCc-ccccceEeeeccCCCCceeEEEeccccc
Confidence 4444432221 23569999997543332 233444443211 1111 1 2233333455555555544
Q ss_pred EEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEEeccC---CCCcEEEEEECCC
Q 004690 391 AVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSL---RTPPSVYDYDMDM 464 (736)
Q Consensus 391 ~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~---~~P~~~~~~d~~~ 464 (736)
++..+. ....+.+|+|..-.+.+.. ...+|.. |.-....++++. .++++-+|. .+++.++.||..+
T Consensus 378 ~LlSRg-~D~tLKvWDLrq~kkpL~~-----~tgL~t~-~~~tdc~FSPd~-kli~TGtS~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 378 YLLSRG-FDDTLKVWDLRQFKKPLNV-----RTGLPTP-FPGTDCCFSPDD-KLILTGTSAPNGMTAGTLFFFDRMT 446 (641)
T ss_pred hhhhcc-CCCceeeeeccccccchhh-----hcCCCcc-CCCCccccCCCc-eEEEecccccCCCCCceEEEEeccc
Confidence 444442 2234889999754443321 1222211 111112234443 566666664 3566788887544
No 240
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.23 E-value=0.023 Score=55.21 Aligned_cols=190 Identities=11% Similarity=0.110 Sum_probs=105.4
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccC---ccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
.+.++.|.-||+++|-++. ...+.|++++.+..+.. ...+ ....+.|.|-. -+++++..+. .+.++
T Consensus 22 ~v~Sv~wn~~g~~lasgs~-----dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk----~ir~w 92 (313)
T KOG1407|consen 22 KVHSVAWNCDGTKLASGSF-----DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDK----TIRIW 92 (313)
T ss_pred cceEEEEcccCceeeeccc-----CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCc----eEEEE
Confidence 4678899999999996544 35678888887754432 2222 23457999887 5666655332 36666
Q ss_pred EcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccc---eeEEEeeeCCEE
Q 004690 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VDTAASHRGNHF 343 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~---~~~~~s~dg~~l 343 (736)
++.++ +.....+...+.+ .+.|||||+++++...+. +|-.+|..+-+ .+...+.. .+..|. ..+.+
T Consensus 93 d~r~~--k~~~~i~~~~eni--~i~wsp~g~~~~~~~kdD---~it~id~r~~~---~~~~~~~~~e~ne~~w~-~~nd~ 161 (313)
T KOG1407|consen 93 DIRSG--KCTARIETKGENI--NITWSPDGEYIAVGNKDD---RITFIDARTYK---IVNEEQFKFEVNEISWN-NSNDL 161 (313)
T ss_pred EeccC--cEEEEeeccCcce--EEEEcCCCCEEEEecCcc---cEEEEEecccc---eeehhcccceeeeeeec-CCCCE
Confidence 76655 2332232222333 578999999998865432 34556665432 22222111 133455 45568
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
+|+++-.| ...|+..+- .....-+-++..+..--.|++.++++++-.. + ..+.+|+++
T Consensus 162 Fflt~GlG--~v~ILsyps--Lkpv~si~AH~snCicI~f~p~GryfA~GsA-D--AlvSLWD~~ 219 (313)
T KOG1407|consen 162 FFLTNGLG--CVEILSYPS--LKPVQSIKAHPSNCICIEFDPDGRYFATGSA-D--ALVSLWDVD 219 (313)
T ss_pred EEEecCCc--eEEEEeccc--cccccccccCCcceEEEEECCCCceEeeccc-c--ceeeccChh
Confidence 88888643 455665542 1122224455544444455566655553332 2 235567665
No 241
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.21 E-value=0.0074 Score=69.36 Aligned_cols=144 Identities=15% Similarity=0.135 Sum_probs=81.4
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCC----------CCee------c-ccc---cCccceeEEeeCCeE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET----------GTPV------G-KPL---VGVTASVEWAGNEAL 249 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~t----------g~~~------~-~~~---~~~~~~~~WspDg~l 249 (736)
...+.-++|||||+++|.+.| ...|.||..+. |... . ..+ ++....+.|+||+.+
T Consensus 69 ~~sv~CVR~S~dG~~lAsGSD-----D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~ 143 (942)
T KOG0973|consen 69 DGSVNCVRFSPDGSYLASGSD-----DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSL 143 (942)
T ss_pred cCceeEEEECCCCCeEeeccC-----cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccE
Confidence 345788899999999997554 45666666652 1110 0 011 122445899999955
Q ss_pred EEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc
Q 004690 250 VYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV 329 (736)
Q Consensus 250 ~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~ 329 (736)
+....-+ +.|.+++..+- +...++.+. ....-++.|.|-|+|++-.+.++. -.||...- -+- .+.+++..
T Consensus 144 lvS~s~D----nsViiwn~~tF--~~~~vl~~H-~s~VKGvs~DP~Gky~ASqsdDrt-ikvwrt~d-w~i-~k~It~pf 213 (942)
T KOG0973|consen 144 LVSVSLD----NSVIIWNAKTF--ELLKVLRGH-QSLVKGVSWDPIGKYFASQSDDRT-LKVWRTSD-WGI-EKSITKPF 213 (942)
T ss_pred EEEeccc----ceEEEEccccc--eeeeeeecc-cccccceEECCccCeeeeecCCce-EEEEEccc-cee-eEeeccch
Confidence 4443322 24666666555 344444433 233446889999999987665532 34454211 111 23344332
Q ss_pred cce-------eEEEeeeCCEEEEEEc
Q 004690 330 VGV-------DTAASHRGNHFFITRR 348 (736)
Q Consensus 330 ~~~-------~~~~s~dg~~l~~~t~ 348 (736)
+.. ...|||||++|.....
T Consensus 214 ~~~~~~T~f~RlSWSPDG~~las~nA 239 (942)
T KOG0973|consen 214 EESPLTTFFLRLSWSPDGHHLASPNA 239 (942)
T ss_pred hhCCCcceeeecccCCCcCeecchhh
Confidence 211 2349999998875543
No 242
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.16 E-value=0.025 Score=65.11 Aligned_cols=119 Identities=11% Similarity=0.146 Sum_probs=76.8
Q ss_pred CCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC--ccceeEEeeCC-eEEE-EEeCCCCCCceEEEEEcCCCCCCcEE
Q 004690 202 NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVY-ITMDEILRPDKAWLHKLEADQSNDIC 277 (736)
Q Consensus 202 G~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~--~~~~~~WspDg-~l~y-~~~~~~~~~~~v~~~~l~t~~~~~~~ 277 (736)
..+|||..+..| +|.+.|.++...+..++.. ..-++.||||| +|+| ++.....+...||+++|.+.....+.
T Consensus 318 ~tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vk 393 (912)
T TIGR02171 318 KAKLAFRNDVTG----NLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVK 393 (912)
T ss_pred eeeEEEEEcCCC----eEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceE
Confidence 457999988655 7999999998776543332 24458999999 8999 65544334556999999987665444
Q ss_pred EEeec--CCceEEEEEEcCCccEEEEEecC-cc--------eeEEEEEeCCCCC--ceEEeecc
Q 004690 278 LYHEK--DDIYSLGLQASESKKFLFIASES-KI--------TRFVFYLDVSKPE--ELRVLTPR 328 (736)
Q Consensus 278 ~~~~~--~~~~~~~~~~S~Dg~~l~~~~~~-~~--------~~~l~~~dl~~~~--~~~~l~~~ 328 (736)
+--+. -|+| ...+.|..+++...+ .. ...-|.+..+.|+ .++.|..+
T Consensus 394 l~ve~aaiprw----rv~e~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~gkfg~p~kl~dg 453 (912)
T TIGR02171 394 LPVENAAIPRW----RVLENGDTVIVYVSDASNNKDDATFAAYSTWQVPFANGKFGTPKKLFDG 453 (912)
T ss_pred eecccccccce----EecCCCCeEEEEEcCCCCCcchhhhhhcceEEEEecCCCCCCchhhhcc
Confidence 43332 1333 245667655444322 11 1246899998887 56666543
No 243
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.14 E-value=0.084 Score=63.33 Aligned_cols=192 Identities=10% Similarity=0.107 Sum_probs=103.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCC----ee-----cccccCccceeEEeeCC-eEEEEEeCCCCCCc
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT----PV-----GKPLVGVTASVEWAGNE-ALVYITMDEILRPD 261 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~----~~-----~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~ 261 (736)
.+..+.|+|||++||-+.. ...|++||+.+.. .. ..........+.|++.. .++.+...+ .
T Consensus 485 ~V~~i~fs~dg~~latgg~-----D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~D----g 555 (793)
T PLN00181 485 LVCAIGFDRDGEFFATAGV-----NKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFE----G 555 (793)
T ss_pred cEEEEEECCCCCEEEEEeC-----CCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCC----C
Confidence 3677899999999885432 3468899876421 10 00111224568998864 544444322 2
Q ss_pred eEEEEEcCCCCCCcEEEEeecCCceEEEEEEcC-CccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEe-e
Q 004690 262 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAAS-H 338 (736)
Q Consensus 262 ~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~-Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s-~ 338 (736)
.|.++++.++ +....+.+. .....++.|+| |+.+|+..+.+ ..|.+.|+.++.....+... ..+. ..|. +
T Consensus 556 ~v~lWd~~~~--~~~~~~~~H-~~~V~~l~~~p~~~~~L~Sgs~D---g~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~ 628 (793)
T PLN00181 556 VVQVWDVARS--QLVTEMKEH-EKRVWSIDYSSADPTLLASGSDD---GSVKLWSINQGVSIGTIKTK-ANICCVQFPSE 628 (793)
T ss_pred eEEEEECCCC--eEEEEecCC-CCCEEEEEEcCCCCCEEEEEcCC---CEEEEEECCCCcEEEEEecC-CCeEEEEEeCC
Confidence 4778888765 233333332 23344788986 67766544332 34677777766522222222 2222 2353 4
Q ss_pred eCCEEEEEEcCCCCCCcEEEEEeCCCCCcee-eEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 339 RGNHFFITRRSDELFNSELLACPVDNTSETT-VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 339 dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~-~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
+|..|+..+ .+ +.|...|+....... .+..+.. .+..+.+..+..++....++. +.+|++.
T Consensus 629 ~g~~latgs-~d----g~I~iwD~~~~~~~~~~~~~h~~--~V~~v~f~~~~~lvs~s~D~~--ikiWd~~ 690 (793)
T PLN00181 629 SGRSLAFGS-AD----HKVYYYDLRNPKLPLCTMIGHSK--TVSYVRFVDSSTLVSSSTDNT--LKLWDLS 690 (793)
T ss_pred CCCEEEEEe-CC----CeEEEEECCCCCccceEecCCCC--CEEEEEEeCCCEEEEEECCCE--EEEEeCC
Confidence 566555443 33 467777776532111 1333332 345566655555556666654 7788876
No 244
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.12 E-value=0.0015 Score=64.03 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=49.5
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcE---EEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (736)
.| ||++||-.+ .....|......|.++||. ++..+|-..... ....... ........+.+.++-+.+ ++
T Consensus 2 ~P-VVlVHG~~~-~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~--~~~~~~~--~~~~~~~~l~~fI~~Vl~--~T 73 (219)
T PF01674_consen 2 RP-VVLVHGTGG-NAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS--PSVQNAH--MSCESAKQLRAFIDAVLA--YT 73 (219)
T ss_dssp ---EEEE--TTT-TTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH--THHHHHH--B-HHHHHHHHHHHHHHHH--HH
T ss_pred CC-EEEECCCCc-chhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC--Ccccccc--cchhhHHHHHHHHHHHHH--hh
Confidence 35 577899443 3445688899999999999 799998332221 1111101 112223555666666554 34
Q ss_pred CCCcEEEEEeChHHHHHHHHHHh
Q 004690 593 TKEKLCIEGRSAGGLLIGAVLNM 615 (736)
Q Consensus 593 d~~ri~~~G~S~GG~la~~~~~~ 615 (736)
.. ||=|+||||||.++-.++..
T Consensus 74 Ga-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 74 GA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp T---EEEEEETCHHHHHHHHHHH
T ss_pred CC-EEEEEEcCCcCHHHHHHHHH
Confidence 55 99999999999988777653
No 245
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.11 E-value=0.0012 Score=59.83 Aligned_cols=167 Identities=13% Similarity=0.173 Sum_probs=95.2
Q ss_pred CCCcEEEEecCCCCc--CCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCC
Q 004690 514 GSDPLLLYGYGSYEI--CNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 591 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~--~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 591 (736)
+..|+|++.--+... -.+.........+.+.|-+-+. -+-| --.++|...-... ....+--.+--+|++++..
T Consensus 25 aG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlf-t~~g--ldsESf~a~h~~~--adr~~rH~AyerYv~eEal 99 (227)
T COG4947 25 AGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLF-TLSG--LDSESFLATHKNA--ADRAERHRAYERYVIEEAL 99 (227)
T ss_pred CCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEE-Eecc--cchHhHhhhcCCH--HHHHHHHHHHHHHHHHhhc
Confidence 346888887542211 1112223334567777765432 2222 1123343211100 1112222344556776543
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccchhhhccCC---C----CC-----CccccccccccccccEE
Q 004690 592 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP---T----IP-----LTTAEWEVKAQNYPHIL 659 (736)
Q Consensus 592 ~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d~~~~~~~~---~----~p-----~~~~~~~i~~~~~ppvL 659 (736)
|.+..+.|.||||+.++....++|++|..+|+.+|++|...+..+. + .| -....|.+.....-.+.
T Consensus 100 --pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~dp~~l~rlr~~~~v 177 (227)
T COG4947 100 --PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLADPFRLERLRRIDMV 177 (227)
T ss_pred --CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccCCcChHHHHHHhhccEE
Confidence 5778999999999999999999999999999999999976544321 1 11 11111112222333477
Q ss_pred EeecCCCCCCCChHHHHHHHHHHhcCCCCC
Q 004690 660 VTAGLNDPRVMYSEPAKFVAKLREMKTDDN 689 (736)
Q Consensus 660 i~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~ 689 (736)
+..|..|+..+ +..++-+.|....++..
T Consensus 178 fc~G~e~~~L~--~~~~L~~~l~dKqipaw 205 (227)
T COG4947 178 FCIGDEDPFLD--NNQHLSRLLSDKQIPAW 205 (227)
T ss_pred EEecCcccccc--chHHHHHHhccccccHH
Confidence 88899988776 44677777777666653
No 246
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.09 E-value=0.064 Score=55.39 Aligned_cols=100 Identities=19% Similarity=0.195 Sum_probs=50.7
Q ss_pred EEEEEEECCCCCeecccccCccceeEEeeCCeEEEEEe------CCCCCCceEEEEEcCCCCCCcEEEEeecCCceE---
Q 004690 217 YTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITM------DEILRPDKAWLHKLEADQSNDICLYHEKDDIYS--- 287 (736)
Q Consensus 217 ~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~l~y~~~------~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~--- 287 (736)
.+++|+|.++++.+...-.+..+.+.-||||+.+|+.. ....|..-|-.++..+-........... +++.
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k-~R~~~~~ 95 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPK-PRAQVVP 95 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS--B--BS-
T ss_pred ceEEEEECCCCcEEEEeecccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCc-chheecc
Confidence 47999999999887533333456688899995444432 1222223344556554321111222111 1221
Q ss_pred --EEEEEcCCccEEEEEecCcceeEEEEEeCCC
Q 004690 288 --LGLQASESKKFLFIASESKITRFVFYLDVSK 318 (736)
Q Consensus 288 --~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~ 318 (736)
.....|.|||++++.--. ..+.|-++|++.
T Consensus 96 ~~~~~~ls~dgk~~~V~N~T-Pa~SVtVVDl~~ 127 (342)
T PF06433_consen 96 YKNMFALSADGKFLYVQNFT-PATSVTVVDLAA 127 (342)
T ss_dssp -GGGEEE-TTSSEEEEEEES-SSEEEEEEETTT
T ss_pred cccceEEccCCcEEEEEccC-CCCeEEEEECCC
Confidence 125689999999875422 222344444444
No 247
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=97.07 E-value=0.019 Score=61.89 Aligned_cols=202 Identities=13% Similarity=0.114 Sum_probs=113.6
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC--eEEEEEeCCCC----------
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE--ALVYITMDEIL---------- 258 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg--~l~y~~~~~~~---------- 258 (736)
.+..++..|.|.+||- |++.-+++||.+.||.-+.. .+.+....++|+|.+ .++-++..+..
T Consensus 402 ~Vr~iSvdp~G~wlas-----GsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~ 476 (733)
T KOG0650|consen 402 LVRSISVDPSGEWLAS-----GSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDR 476 (733)
T ss_pred eEEEEEecCCcceeee-----cCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccch
Confidence 4678889999999984 55556799999999986654 556667779999998 45555443210
Q ss_pred ------------------CCceEEEEEcCCCC--CCcE-EEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCC
Q 004690 259 ------------------RPDKAWLHKLEADQ--SNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (736)
Q Consensus 259 ------------------~~~~v~~~~l~t~~--~~~~-~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~ 317 (736)
.+.++..+.-+... ...+ ++... +.-.-++.|..+|.||+....+..+..|++..+.
T Consensus 477 ~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~--~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLS 554 (733)
T KOG0650|consen 477 LEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKH--PKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLS 554 (733)
T ss_pred hhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEec--CCccceeeeecCCceEEEeccCCCcceEEEEecc
Confidence 00011111111000 0000 01100 1112257899999999998888888889998887
Q ss_pred CCCceE-EeeccccceeE-EEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEE--EeCCEEEEE
Q 004690 318 KPEELR-VLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ--LFIDHLAVY 393 (736)
Q Consensus 318 ~~~~~~-~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~--~~~~~l~~~ 393 (736)
... .+ ++.....-+.. .|.|..-+|++.|.+. |-.+|+........+.+.-. .+..++ ..+|.|++.
T Consensus 555 K~~-sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~------vRiYdL~kqelvKkL~tg~k--wiS~msihp~GDnli~g 625 (733)
T KOG0650|consen 555 KRK-SQSPFRKSKGLVQRVKFHPSKPYLFVATQRS------VRIYDLSKQELVKKLLTGSK--WISSMSIHPNGDNLILG 625 (733)
T ss_pred ccc-ccCchhhcCCceeEEEecCCCceEEEEeccc------eEEEehhHHHHHHHHhcCCe--eeeeeeecCCCCeEEEe
Confidence 654 22 22222222232 3666656666665543 33445543111122333322 344444 455778766
Q ss_pred EEeCCeeEEEEEEcCCCCC
Q 004690 394 EREGGLQKITTYRLPAVGE 412 (736)
Q Consensus 394 ~~~~g~~~l~v~~l~~~g~ 412 (736)
..++ ++..++++.+.+
T Consensus 626 s~d~---k~~WfDldlssk 641 (733)
T KOG0650|consen 626 SYDK---KMCWFDLDLSSK 641 (733)
T ss_pred cCCC---eeEEEEcccCcc
Confidence 5543 477888887554
No 248
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=97.06 E-value=0.029 Score=61.42 Aligned_cols=157 Identities=14% Similarity=0.180 Sum_probs=90.8
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec--ccc--cC-ccceeEEeeCC-eEEEEEeCCCCCCceE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG--KPL--VG-VTASVEWAGNE-ALVYITMDEILRPDKA 263 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~--~~~--~~-~~~~~~WspDg-~l~y~~~~~~~~~~~v 263 (736)
...+...++||||++|||+.-. +..||-+..+....+. +.. .. ....+.++-|+ .++|++.+. ..+
T Consensus 382 ~~nIs~~aiSPdg~~Ia~st~~----~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~----~~l 453 (691)
T KOG2048|consen 382 KENISCAAISPDGNLIAISTVS----RTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNI----FSL 453 (691)
T ss_pred ccceeeeccCCCCCEEEEeecc----ceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEeccc----cee
Confidence 4457888999999999998742 2445554444311111 111 11 13457899999 777777322 245
Q ss_pred EEEEcCCCCCCcEEEEeec-CCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccc-e-eEEEee-e
Q 004690 264 WLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-V-DTAASH-R 339 (736)
Q Consensus 264 ~~~~l~t~~~~~~~~~~~~-~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~-~~~~s~-d 339 (736)
....+.++..+...-.... .......+..|+||.||++.+ +...|+++++++.+ .+.+..+.+. + ...+.| +
T Consensus 454 e~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~---t~g~I~v~nl~~~~-~~~l~~rln~~vTa~~~~~~~ 529 (691)
T KOG2048|consen 454 EEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS---TRGQIFVYNLETLE-SHLLKVRLNIDVTAAAFSPFV 529 (691)
T ss_pred EEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe---ccceEEEEEcccce-eecchhccCcceeeeeccccc
Confidence 5556655533322222222 233344577899999999876 44578999999987 5555433331 1 123553 3
Q ss_pred CCEEEEEEcCCCCCCcEEEEEeCC
Q 004690 340 GNHFFITRRSDELFNSELLACPVD 363 (736)
Q Consensus 340 g~~l~~~t~~~~~~~~~l~~~~~~ 363 (736)
-+.|++.+.. .+++..|++
T Consensus 530 ~~~lvvats~-----nQv~efdi~ 548 (691)
T KOG2048|consen 530 RNRLVVATSN-----NQVFEFDIE 548 (691)
T ss_pred cCcEEEEecC-----CeEEEEecc
Confidence 3456555432 468887774
No 249
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.03 E-value=0.0041 Score=61.77 Aligned_cols=102 Identities=17% Similarity=0.196 Sum_probs=56.4
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHH--------HHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHH
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSL--------LDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l--------~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (736)
..|||+||..|+... +......+ ....+.++..|+.... ..++ +.... ...+-+..+++++.+
T Consensus 5 ~pVlFIhG~~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~---s~~~--g~~l~--~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 5 IPVLFIHGNAGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEEL---SAFH--GRTLQ--RQAEFLAEAIKYILE 75 (225)
T ss_pred CEEEEECcCCCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccc---cccc--cccHH--HHHHHHHHHHHHHHH
Confidence 458999995554221 22222111 1125778888886421 1111 00111 112344556666655
Q ss_pred cC---CCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEcC
Q 004690 589 NC---YCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAV 627 (736)
Q Consensus 589 ~~---~~d~~ri~~~G~S~GG~la~~~~~~~p---~~~~a~v~~~ 627 (736)
.. ...+++|.++||||||.++-.++...+ +.++.+|..+
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~ 120 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG 120 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc
Confidence 43 456789999999999988877766533 3567776544
No 250
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.02 E-value=0.57 Score=52.31 Aligned_cols=161 Identities=14% Similarity=0.075 Sum_probs=101.9
Q ss_pred ceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCc--ceeEEEEEe
Q 004690 239 ASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLD 315 (736)
Q Consensus 239 ~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~--~~~~l~~~d 315 (736)
+.++-|||+ .++|.......+.+.+...++.+++.- .++- .....++.|.+|++.++++..+. ....||...
T Consensus 132 g~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~----~d~i-~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~ 206 (682)
T COG1770 132 GAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEEL----PDEI-TNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHR 206 (682)
T ss_pred eeeeeCCCCceEEEEEecccccEEEEEEEeccccccc----chhh-cccccceEEecCCCeEEEEEEcCCCCcceEEEEe
Confidence 456789999 688877766777888999999887321 1111 12233678999999999988553 457899988
Q ss_pred CCCCC-ceEEeeccccceeE-E--EeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCC-CceeeeEEEeCCEE
Q 004690 316 VSKPE-ELRVLTPRVVGVDT-A--ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFIDHL 390 (736)
Q Consensus 316 l~~~~-~~~~l~~~~~~~~~-~--~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~-~~~i~~~~~~~~~l 390 (736)
+.++. .-+++....+..-+ . -+..+++|++..+. ....+++.++.+.++...+++.+++ ++. -.++-.+++.
T Consensus 207 ~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~--~~tsE~~ll~a~~p~~~p~vv~pr~~g~e-Y~~eh~~d~f 283 (682)
T COG1770 207 LGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGS--HITSEVRLLDADDPEAEPKVVLPRENGVE-YSVEHGGDRF 283 (682)
T ss_pred cCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCC--CcceeEEEEecCCCCCceEEEEEcCCCcE-EeeeecCcEE
Confidence 88733 23445443332111 1 33445666666643 3457888888887665545444444 433 3555567888
Q ss_pred EEEEEeCCeeEEEEEEcC
Q 004690 391 AVYEREGGLQKITTYRLP 408 (736)
Q Consensus 391 ~~~~~~~g~~~l~v~~l~ 408 (736)
++..+.+| ....++..+
T Consensus 284 ~i~sN~~g-knf~l~~ap 300 (682)
T COG1770 284 YILSNADG-KNFKLVRAP 300 (682)
T ss_pred EEEecCCC-cceEEEEcc
Confidence 88888888 334556554
No 251
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.00 E-value=0.0035 Score=64.06 Aligned_cols=111 Identities=18% Similarity=0.157 Sum_probs=71.7
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHH---CCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHH----HHHHHHH
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLD---RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIA----CAEYLIK 588 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~---~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~----~~~~l~~ 588 (736)
.+++|++-|.+|... .|......|.+ ..+.|++....|+...... .... ...+.-+++|-++ .++.++.
T Consensus 2 ~~li~~IPGNPGlv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~-~~~~-~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSN-SKFS-PNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCccc-cccc-CCCCccCHHHHHHHHHHHHHHHhh
Confidence 468899999777533 35555555554 4899999999887654332 0000 1122333444443 4444444
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEcCCcc
Q 004690 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFV 630 (736)
Q Consensus 589 ~~~~d~~ri~~~G~S~GG~la~~~~~~~p---~~~~a~v~~~p~~ 630 (736)
+......++.++|||.|+++++.++.+.+ ..+..+++..|.+
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 32113468999999999999999999998 5678888888754
No 252
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.98 E-value=0.0055 Score=67.79 Aligned_cols=131 Identities=13% Similarity=0.025 Sum_probs=75.9
Q ss_pred CeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCC----------------chhHHHHHHCCcEEEEEcc-cCCCC
Q 004690 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF----------------NSSRLSLLDRGFIFAIAQI-RGGGE 558 (736)
Q Consensus 496 G~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~----------------~~~~~~l~~~G~~v~~~d~-RG~g~ 558 (736)
+..+..|++..+.. ....|+||+++||+|.+..... ...-..|.+.+ .++.+|. +|.|.
T Consensus 60 ~~~lFyw~~~s~~~---~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~-~~l~iDqP~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRNG---NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEA-YVIYVDQPAGVGF 135 (462)
T ss_pred CceEEEEEEEcCCC---CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccccc-CeEEEeCCCCcCc
Confidence 45677676655432 3467999999999987642211 01112455554 4555664 67664
Q ss_pred CChhhhhccccccCcChHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHh----CC------CceeEEEEcC
Q 004690 559 LGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNM----RP------DLFKAAVAAV 627 (736)
Q Consensus 559 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~~~G~S~GG~la~~~~~~----~p------~~~~a~v~~~ 627 (736)
+-....+ .........+|+..+++...++ ......++.|+|+|+||..+..+|.+ .. =.+++++...
T Consensus 136 S~~~~~~--~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGN 213 (462)
T PTZ00472 136 SYADKAD--YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGN 213 (462)
T ss_pred ccCCCCC--CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEec
Confidence 3211110 0111123456777766655443 23345789999999999988666543 11 1368888888
Q ss_pred Cccch
Q 004690 628 PFVDV 632 (736)
Q Consensus 628 p~~d~ 632 (736)
|++|.
T Consensus 214 g~~dp 218 (462)
T PTZ00472 214 GLTDP 218 (462)
T ss_pred cccCh
Confidence 87764
No 253
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=96.97 E-value=0.0074 Score=59.94 Aligned_cols=193 Identities=15% Similarity=0.164 Sum_probs=99.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cc---------cCccceeEEeeCC-eEEEEEeCCCCCCc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL---------VGVTASVEWAGNE-ALVYITMDEILRPD 261 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~---------~~~~~~~~WspDg-~l~y~~~~~~~~~~ 261 (736)
+...+|||||++|+-++ -.--|-|||.-+|+.+.+ .. +...-.+.||.|. -++--+.| .
T Consensus 216 ~EcA~FSPDgqyLvsgS-----vDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqD-----G 285 (508)
T KOG0275|consen 216 VECARFSPDGQYLVSGS-----VDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQD-----G 285 (508)
T ss_pred hhheeeCCCCceEeecc-----ccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcC-----C
Confidence 55678999999998443 234689999999987653 11 1223346777777 34332222 2
Q ss_pred eEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eEEEeeeC
Q 004690 262 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRG 340 (736)
Q Consensus 262 ~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg 340 (736)
++..+++.+++ =..-|+.....-...+.+|.|+..|+-.+.+.+ +.+--+.+|+.++.+.....-+ +..+++||
T Consensus 286 kIKvWri~tG~--ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~t---vRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG 360 (508)
T KOG0275|consen 286 KIKVWRIETGQ--CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQT---VRIHGLKSGKCLKEFRGHSSYVNEATFTDDG 360 (508)
T ss_pred cEEEEEEecch--HHHHhhhhhccCeeEEEEccCcchhhcccccce---EEEeccccchhHHHhcCccccccceEEcCCC
Confidence 34455555652 222333222222345789999999875444322 3344455555111222221111 23488899
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeC---CEEEEEEEeCCeeEEEEEEcC
Q 004690 341 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI---DHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 341 ~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~---~~l~~~~~~~g~~~l~v~~l~ 408 (736)
.+++-.+.+. ..++ .+..+.+-....-+...+..+..+-+.. .++++.-+.+ .++++++.
T Consensus 361 ~~iisaSsDg---tvkv--W~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsn---tv~imn~q 423 (508)
T KOG0275|consen 361 HHIISASSDG---TVKV--WHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSN---TVYIMNMQ 423 (508)
T ss_pred CeEEEecCCc---cEEE--ecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCC---eEEEEecc
Confidence 8776554432 2333 3333322111222333455555555444 3555444433 36777775
No 254
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=96.97 E-value=0.0069 Score=59.34 Aligned_cols=100 Identities=22% Similarity=0.205 Sum_probs=65.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
.+..+.+||||.+.|+ |.+..++++||++.++-..- .-.....+++|+|+. .|.-... . .|..+++.
T Consensus 194 ~v~t~~vSpDGslcas-----Ggkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at~-~-----sIkIwdl~ 262 (315)
T KOG0279|consen 194 YVNTVTVSPDGSLCAS-----GGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATA-T-----SIKIWDLE 262 (315)
T ss_pred cEEEEEECCCCCEEec-----CCCCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEeeccC-C-----ceEEEecc
Confidence 4778899999999997 55668999999998886541 222335669999997 3433222 1 26666776
Q ss_pred CCCCCcEEEEeec------CCceEEEEEEcCCccEEEEE
Q 004690 270 ADQSNDICLYHEK------DDIYSLGLQASESKKFLFIA 302 (736)
Q Consensus 270 t~~~~~~~~~~~~------~~~~~~~~~~S~Dg~~l~~~ 302 (736)
++..-+.+-.+.. .+...++++||+||..|+-.
T Consensus 263 ~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g 301 (315)
T KOG0279|consen 263 SKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAG 301 (315)
T ss_pred chhhhhhccccccccccccCCcEEEEEEEcCCCcEEEee
Confidence 6532122212111 13456789999999998653
No 255
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.95 E-value=0.013 Score=63.56 Aligned_cols=166 Identities=17% Similarity=0.112 Sum_probs=94.2
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHH-HHHHCC--cEEEEEcccCC-CCCChhhhhccccccCcChHHHHHHHHHHHHH--
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRL-SLLDRG--FIFAIAQIRGG-GELGRQWYENGKFLKKKNTFTDFIACAEYLIK-- 588 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~-~l~~~G--~~v~~~d~RG~-g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-- 588 (736)
-.|++++.||++-..-...|...++ .|--.| .-+..+|++-. |+ .+-....+-++.+..+.+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-----------~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-----------ANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-----------cchHHHHHHHHHHhhhhhhhh
Confidence 3588999999772211111222233 333334 33455566531 21 1111122344444443322
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhCCCc-eeEEEEcCCccchhhhccCCCCCCccccccccccccccEEEeecCCCC
Q 004690 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL-FKAAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYPHILVTAGLNDP 667 (736)
Q Consensus 589 ~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~-~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~ppvLi~~G~~D~ 667 (736)
.+..--..|.++|+|||..++..+...+-|. +.|+||..=.++-..- ..+++. |- +-. .+-|+|++.|.+|.
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg--prgirD---E~-Lld-mk~PVLFV~Gsnd~ 316 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG--PRGIRD---EA-LLD-MKQPVLFVIGSNDH 316 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc--ccCCcc---hh-hHh-cCCceEEEecCCcc
Confidence 2444457899999999988888877765544 5666655422221110 001110 00 111 34569999999999
Q ss_pred CCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCC
Q 004690 668 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 704 (736)
Q Consensus 668 ~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~ 704 (736)
++++..-+++.+++++. ++++++. +++|.+.
T Consensus 317 mcspn~ME~vreKMqA~---~elhVI~---~adhsma 347 (784)
T KOG3253|consen 317 MCSPNSMEEVREKMQAE---VELHVIG---GADHSMA 347 (784)
T ss_pred cCCHHHHHHHHHHhhcc---ceEEEec---CCCcccc
Confidence 99999999999998865 4567775 8999774
No 256
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.90 E-value=0.018 Score=56.57 Aligned_cols=171 Identities=14% Similarity=0.118 Sum_probs=92.7
Q ss_pred EEEEecCCCCcCCCC--CCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 518 LLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 518 ~vl~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
.||++-||.-....| .|....+.|+++||+|++.-|.-+ -+... .-....+.+..|++.|.+++..++.
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~t----fDH~~-----~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVT----FDHQA-----IAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCC----CcHHH-----HHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 677777874333333 466777899999999999888531 11111 1122346677888888877644433
Q ss_pred --cEEEEEeChHHHHHHHHHHhCCCceeEEEEcC----------CccchhhhccCCCCCCcccccc--cccc-ccccEEE
Q 004690 596 --KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV----------PFVDVLTTMLDPTIPLTTAEWE--VKAQ-NYPHILV 660 (736)
Q Consensus 596 --ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~----------p~~d~~~~~~~~~~p~~~~~~~--i~~~-~~ppvLi 660 (736)
.+.-+|||+|+.+-+.+....+..-++-|+.+ |+++-+......+...++.|-. ++.. ..+..|+
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~~li~~~Y~~~rnLL 168 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPEETRRLIRESYQVRRNLL 168 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCccCCHHHHHHHHHHhcCCccceE
Confidence 67889999999988877765543323323221 2211110000000000111100 2222 3344666
Q ss_pred eecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCC
Q 004690 661 TAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 703 (736)
Q Consensus 661 ~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 703 (736)
+-=.+|.. .++..+.+.|+....+ .+.... -.+.|..
T Consensus 169 IkF~~D~i---Dqt~~L~~~L~~r~~~--~~~~~~-L~G~HLT 205 (250)
T PF07082_consen 169 IKFNDDDI---DQTDELEQILQQRFPD--MVSIQT-LPGNHLT 205 (250)
T ss_pred EEecCCCc---cchHHHHHHHhhhccc--cceEEe-CCCCCCC
Confidence 66666653 5888999999865432 222221 2467854
No 257
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.86 E-value=0.002 Score=70.19 Aligned_cols=90 Identities=19% Similarity=0.232 Sum_probs=63.8
Q ss_pred CCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 004690 532 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 611 (736)
Q Consensus 532 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~ 611 (736)
..|......|.+.||.+ ..|++|.| ..|.... .....++++.+.++.+.+... ..++.++||||||+++..
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~g---YDwR~~~---~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFG---YDFRQSN---RLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCC---CCccccc---cHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHH
Confidence 45777888999999977 67888765 4455321 112346777778887766532 368999999999999999
Q ss_pred HHHhCCCc----eeEEEEcCCcc
Q 004690 612 VLNMRPDL----FKAAVAAVPFV 630 (736)
Q Consensus 612 ~~~~~p~~----~~a~v~~~p~~ 630 (736)
.+..+|+. ++.+|+.++..
T Consensus 179 fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHCCHhHHhHhccEEEECCCC
Confidence 98888864 46666665543
No 258
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=96.81 E-value=0.091 Score=58.72 Aligned_cols=232 Identities=13% Similarity=0.125 Sum_probs=123.8
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCee--------------------------------ccc-ccCcc
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV--------------------------------GKP-LVGVT 238 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~--------------------------------~~~-~~~~~ 238 (736)
.+....+|+|++.||-... ...|++|.+...+.+ .+. -.+.+
T Consensus 380 ~v~ca~fSddssmlA~Gf~-----dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPV 454 (707)
T KOG0263|consen 380 GVTCAEFSDDSSMLACGFV-----DSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPV 454 (707)
T ss_pred cceeEeecCCcchhhcccc-----ccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCce
Confidence 3667789999999986543 345666655431100 000 01122
Q ss_pred ceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCC
Q 004690 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (736)
Q Consensus 239 ~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~ 318 (736)
.+.+|+||.+++.....+ ..+.++.+.+- .-.++|.+.... ..++.++|-|-|.+ +.+...+..||..|-..
T Consensus 455 yg~sFsPd~rfLlScSED----~svRLWsl~t~--s~~V~y~GH~~P-VwdV~F~P~GyYFa-tas~D~tArLWs~d~~~ 526 (707)
T KOG0263|consen 455 YGCSFSPDRRFLLSCSED----SSVRLWSLDTW--SCLVIYKGHLAP-VWDVQFAPRGYYFA-TASHDQTARLWSTDHNK 526 (707)
T ss_pred eeeeecccccceeeccCC----cceeeeecccc--eeEEEecCCCcc-eeeEEecCCceEEE-ecCCCceeeeeecccCC
Confidence 346899999666555432 23666677765 345667644322 23566889986543 34445566888877644
Q ss_pred CCceEEeecccccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEE-e
Q 004690 319 PEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYER-E 396 (736)
Q Consensus 319 ~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~-~ 396 (736)
+.+.+.....++. +.|.|+..+++ +... ...+-..|+.+ +...+++... ...+..+.....+.++... +
T Consensus 527 --PlRifaghlsDV~cv~FHPNs~Y~a--TGSs---D~tVRlWDv~~-G~~VRiF~GH-~~~V~al~~Sp~Gr~LaSg~e 597 (707)
T KOG0263|consen 527 --PLRIFAGHLSDVDCVSFHPNSNYVA--TGSS---DRTVRLWDVST-GNSVRIFTGH-KGPVTALAFSPCGRYLASGDE 597 (707)
T ss_pred --chhhhcccccccceEEECCcccccc--cCCC---CceEEEEEcCC-CcEEEEecCC-CCceEEEEEcCCCceEeeccc
Confidence 3566677777777 45888776443 2221 22344445544 2333455432 3345555555554444333 3
Q ss_pred CCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCcccCcceEEEEeccCCCCcEEE
Q 004690 397 GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVY 458 (736)
Q Consensus 397 ~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~ 458 (736)
++ .|.+|++.. |..+.. +-+...++.+++.+.+++.+ ...+...--++|
T Consensus 598 d~--~I~iWDl~~-~~~v~~--------l~~Ht~ti~SlsFS~dg~vL--asgg~DnsV~lW 646 (707)
T KOG0263|consen 598 DG--LIKIWDLAN-GSLVKQ--------LKGHTGTIYSLSFSRDGNVL--ASGGADNSVRLW 646 (707)
T ss_pred CC--cEEEEEcCC-Ccchhh--------hhcccCceeEEEEecCCCEE--EecCCCCeEEEE
Confidence 33 488999974 332211 11112234445566666544 334555544454
No 259
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.80 E-value=0.005 Score=63.89 Aligned_cols=89 Identities=22% Similarity=0.329 Sum_probs=65.1
Q ss_pred HCCcEEEEEcccCCCCC---Chhhh-hcc--ccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC
Q 004690 543 DRGFIFAIAQIRGGGEL---GRQWY-ENG--KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 616 (736)
Q Consensus 543 ~~G~~v~~~d~RG~g~~---g~~~~-~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~ 616 (736)
+.+-.++.+..|--|++ |..-+ ++. ........+.|+...+.+|+.........|+++|+|+||+|+++.=..+
T Consensus 109 ~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY 188 (492)
T KOG2183|consen 109 ELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY 188 (492)
T ss_pred hhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcC
Confidence 34888999999977763 43311 111 1122356789999999999987555667899999999999999999999
Q ss_pred CCceeEEE-EcCCccc
Q 004690 617 PDLFKAAV-AAVPFVD 631 (736)
Q Consensus 617 p~~~~a~v-~~~p~~d 631 (736)
|.++.+++ +.+|++-
T Consensus 189 PHiv~GAlAaSAPvl~ 204 (492)
T KOG2183|consen 189 PHIVLGALAASAPVLY 204 (492)
T ss_pred hhhhhhhhhccCceEe
Confidence 99876554 4556543
No 260
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=96.72 E-value=0.078 Score=53.01 Aligned_cols=217 Identities=12% Similarity=0.156 Sum_probs=108.6
Q ss_pred CceEEeecchhcCCC---C-eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-
Q 004690 174 PEHLILDENVKAEGR---G-FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE- 247 (736)
Q Consensus 174 ~~~vllD~n~~~~~~---~-~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg- 247 (736)
+..|+.|...+.-+. + ...+....||+||++|+-++. ...+.+||+-.|..+.. .++.-..+..|.|-.
T Consensus 45 G~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~-----D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~ 119 (405)
T KOG1273|consen 45 GRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSR-----DWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKR 119 (405)
T ss_pred CcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecC-----CceeEEEeccCCCceeEEEccCccceeeeccccC
Confidence 446777755542211 1 345889999999999875543 35699999999886543 444444557888876
Q ss_pred -eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEE---EEcCCccEEEEEecCcceeEEEEEeCCCCC--c
Q 004690 248 -ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGL---QASESKKFLFIASESKITRFVFYLDVSKPE--E 321 (736)
Q Consensus 248 -~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~---~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~--~ 321 (736)
..+.+-.+.. -++.+++.+ ....+-...+....... .+.+.|+||+... .+ ..+.+++.++-+ .
T Consensus 120 n~~va~~~~~s-----p~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGt-sK--Gkllv~~a~t~e~va 189 (405)
T KOG1273|consen 120 NKCVATIMEES-----PVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITGT-SK--GKLLVYDAETLECVA 189 (405)
T ss_pred CeEEEEEecCC-----cEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEec-Cc--ceEEEEecchheeee
Confidence 3443433332 233344432 22222222222222222 2678899986533 22 245667777654 1
Q ss_pred eEEeeccccce-eEEEeeeCCEEEEEEcCCCCCCcEEEEEe-CCCCCceeeEecCCC--C----ceeeeEEEeCCEEEEE
Q 004690 322 LRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACP-VDNTSETTVLIPHRE--S----VKLQDIQLFIDHLAVY 393 (736)
Q Consensus 322 ~~~l~~~~~~~-~~~~s~dg~~l~~~t~~~~~~~~~l~~~~-~~~~~~~~~l~~~~~--~----~~i~~~~~~~~~l~~~ 393 (736)
.-.++.- ..+ ...++..|+.|++-+.+. --+.|-.. +...+...-+-+... + ..-....+++++.|+.
T Consensus 190 s~rits~-~~IK~I~~s~~g~~liiNtsDR---vIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~ 265 (405)
T KOG1273|consen 190 SFRITSV-QAIKQIIVSRKGRFLIINTSDR---VIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVC 265 (405)
T ss_pred eeeechh-eeeeEEEEeccCcEEEEecCCc---eEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEE
Confidence 1122221 112 233777788776665432 23333322 222111000100000 0 0011234455666666
Q ss_pred EEeCCeeEEEEEEcCC
Q 004690 394 EREGGLQKITTYRLPA 409 (736)
Q Consensus 394 ~~~~g~~~l~v~~l~~ 409 (736)
........|++|....
T Consensus 266 a~s~~aHaLYIWE~~~ 281 (405)
T KOG1273|consen 266 AGSARAHALYIWEKSI 281 (405)
T ss_pred eccccceeEEEEecCC
Confidence 6555556788887653
No 261
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=96.71 E-value=0.52 Score=48.33 Aligned_cols=113 Identities=15% Similarity=0.220 Sum_probs=75.8
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc---cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~---~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
++....||.||.+||= |+-.-.|.|+...+|..+.. +..+..- +.|.|-+.|++....+. .||.+.+
T Consensus 108 SVt~~~FshdgtlLAT-----GdmsG~v~v~~~stg~~~~~~~~e~~dieW-l~WHp~a~illAG~~DG----svWmw~i 177 (399)
T KOG0296|consen 108 SVTCCSFSHDGTLLAT-----GDMSGKVLVFKVSTGGEQWKLDQEVEDIEW-LKWHPRAHILLAGSTDG----SVWMWQI 177 (399)
T ss_pred ceEEEEEccCceEEEe-----cCCCccEEEEEcccCceEEEeecccCceEE-EEecccccEEEeecCCC----cEEEEEC
Confidence 6888999999999983 33344799999998876542 2222333 78889876555444332 4999999
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
... ....++.+....... -.+.||||.|+....+ ..|.+.++.++.
T Consensus 178 p~~--~~~kv~~Gh~~~ct~-G~f~pdGKr~~tgy~d---gti~~Wn~ktg~ 223 (399)
T KOG0296|consen 178 PSQ--ALCKVMSGHNSPCTC-GEFIPDGKRILTGYDD---GTIIVWNPKTGQ 223 (399)
T ss_pred CCc--ceeeEecCCCCCccc-ccccCCCceEEEEecC---ceEEEEecCCCc
Confidence 875 356677665443322 2479999998765543 345667777776
No 262
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.70 E-value=0.028 Score=54.77 Aligned_cols=197 Identities=21% Similarity=0.191 Sum_probs=107.5
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCC-----cEEEEEcccCC----CCCChhhh----hccccccCcChH----H
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRG-----FIFAIAQIRGG----GELGRQWY----ENGKFLKKKNTF----T 577 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~RG~----g~~g~~~~----~~~~~~~~~~~~----~ 577 (736)
..|+ ||+||..|... ++..+...|+..| -.++.+|.-|+ |.+.+.-. +-+ ...+.++. .
T Consensus 45 ~iPT-IfIhGsgG~as--S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~g-fe~n~~s~~~~s~ 120 (288)
T COG4814 45 AIPT-IFIHGSGGTAS--SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFG-FEDNTASGLDQSK 120 (288)
T ss_pred ccce-EEEecCCCChh--HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEE-EecCcCchhhHHH
Confidence 4675 66898555433 3555666666665 45677777663 11111100 001 11122222 3
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh------CCCceeEEEEcCCccchhhhccCC-------CCC-C
Q 004690 578 DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM------RPDLFKAAVAAVPFVDVLTTMLDP-------TIP-L 643 (736)
Q Consensus 578 D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~------~p~~~~a~v~~~p~~d~~~~~~~~-------~~p-~ 643 (736)
-+..++.+|.++..+ .++-++||||||.-....+.. .|.+=+-+.+..||- ......+. ..| +
T Consensus 121 wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN-~~~l~~de~v~~v~~~~~~~ 197 (288)
T COG4814 121 WLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN-VGNLVPDETVTDVLKDGPGL 197 (288)
T ss_pred HHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc-ccccCCCcchheeeccCccc
Confidence 466788899988766 689999999999887777764 354434444444443 11100010 011 1
Q ss_pred ccc---ccccccc----ccccEEEeecCC------CCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHH
Q 004690 644 TTA---EWEVKAQ----NYPHILVTAGLN------DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 710 (736)
Q Consensus 644 ~~~---~~~i~~~----~~ppvLi~~G~~------D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 710 (736)
... +|.+... ...-+|++.|+- |-.||...+...+.-+...++....-+++ -+++-|.-.......
T Consensus 198 ~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~-Gk~a~Hs~lhen~~v 276 (288)
T COG4814 198 IKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYK-GKDARHSKLHENPTV 276 (288)
T ss_pred cCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeee-CCcchhhccCCChhH
Confidence 111 1111111 233589999976 55899999888888887776655444444 235788765444444
Q ss_pred HHHHHHHHHHHH
Q 004690 711 LREAAFTYTFLM 722 (736)
Q Consensus 711 ~~~~a~~~~fl~ 722 (736)
.+. +..||.
T Consensus 277 ~~y---v~~FLw 285 (288)
T COG4814 277 AKY---VKNFLW 285 (288)
T ss_pred HHH---HHHHhh
Confidence 443 445654
No 263
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=96.70 E-value=0.059 Score=57.79 Aligned_cols=193 Identities=10% Similarity=0.054 Sum_probs=110.4
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCc-cceeEEeeCC-eEEEEEeCCCC-------CC
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-TASVEWAGNE-ALVYITMDEIL-------RP 260 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~-~~~~~WspDg-~l~y~~~~~~~-------~~ 260 (736)
..+..+.|||-++.|||-.....+-...+-++.+-+++.++. .+.++ ...+-|-..| .|.+-...... ..
T Consensus 347 ~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n 426 (698)
T KOG2314|consen 347 SGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSN 426 (698)
T ss_pred ccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEee
Confidence 357889999999999999887776677888899988877653 33333 2347899899 77665442111 11
Q ss_pred ceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCc--ceeEEEEEeCCCCCceEEeecccc--ceeEEE
Q 004690 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVV--GVDTAA 336 (736)
Q Consensus 261 ~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~--~~~~l~~~dl~~~~~~~~l~~~~~--~~~~~~ 336 (736)
.+++++ ..... .+.+.+-. ...+..+|-|.|...++.+... .+-..|-+.....+ +.++..-.. .....|
T Consensus 427 ~eIfri--reKdI-pve~velk--e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~-~~lVk~~dk~~~N~vfw 500 (698)
T KOG2314|consen 427 LEIFRI--REKDI-PVEVVELK--ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK-PSLVKELDKKFANTVFW 500 (698)
T ss_pred EEEEEe--eccCC-Cceeeecc--hheeeeeeccCCCeEEEEEccccccceeEEEeecCCCc-hhhhhhhcccccceEEE
Confidence 233433 22211 12222222 2344678999998777666443 33355666543333 444332111 113469
Q ss_pred eeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEE
Q 004690 337 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVY 393 (736)
Q Consensus 337 s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~ 393 (736)
+|.|+.+++.+-.. .++.|..+|.+-... ..+...+......+.|+..+.|+.
T Consensus 501 sPkG~fvvva~l~s--~~g~l~F~D~~~a~~--k~~~~~eh~~at~veWDPtGRYvv 553 (698)
T KOG2314|consen 501 SPKGRFVVVAALVS--RRGDLEFYDTDYADL--KDTASPEHFAATEVEWDPTGRYVV 553 (698)
T ss_pred cCCCcEEEEEEecc--cccceEEEecchhhh--hhccCccccccccceECCCCCEEE
Confidence 99999877665543 467788888753111 122222333445566666544443
No 264
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.70 E-value=0.003 Score=43.29 Aligned_cols=29 Identities=24% Similarity=0.478 Sum_probs=21.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYV 221 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v 221 (736)
...+.|||||++|+|+.+..+....+||+
T Consensus 11 ~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred ccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 35689999999999999988222577875
No 265
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=96.70 E-value=0.5 Score=47.04 Aligned_cols=170 Identities=14% Similarity=0.151 Sum_probs=95.6
Q ss_pred CceEEeec---chhcC-CCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCC--C---eecccccC---cccee
Q 004690 174 PEHLILDE---NVKAE-GRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG--T---PVGKPLVG---VTASV 241 (736)
Q Consensus 174 ~~~vllD~---n~~~~-~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg--~---~~~~~~~~---~~~~~ 241 (736)
+.-++.|. |+... .-...++...++||.|+++|.. | =....-|+++.+. + .+...+.+ ..+..
T Consensus 77 GklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcG----G-LdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC 151 (343)
T KOG0286|consen 77 GKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACG----G-LDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCC 151 (343)
T ss_pred CeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEec----C-cCceeEEEecccccccccceeeeeecCccceeEEE
Confidence 44566663 43311 1134678899999999999964 2 2234555555543 2 12212333 34556
Q ss_pred EEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcC-CccEEEEEecCcceeEEEEEeCCCCC
Q 004690 242 EWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 242 ~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~-Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
.|.+|++|+-.+.|. .-.++++.++ ..+..|.+.... .++++.+| |++. +++........ +.|+..+.
T Consensus 152 ~f~dD~~ilT~SGD~-----TCalWDie~g--~~~~~f~GH~gD-V~slsl~p~~~nt-FvSg~cD~~ak--lWD~R~~~ 220 (343)
T KOG0286|consen 152 RFLDDNHILTGSGDM-----TCALWDIETG--QQTQVFHGHTGD-VMSLSLSPSDGNT-FVSGGCDKSAK--LWDVRSGQ 220 (343)
T ss_pred EEcCCCceEecCCCc-----eEEEEEcccc--eEEEEecCCccc-EEEEecCCCCCCe-EEeccccccee--eeeccCcc
Confidence 888888776544332 3567799888 456677654333 34677888 7775 44444444444 44555554
Q ss_pred ceEEeeccccceeE-EEeeeCCEEEEEEcCCCCCCcEEEEEeC
Q 004690 321 ELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPV 362 (736)
Q Consensus 321 ~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~~l~~~~~ 362 (736)
..+.+...+.++.. .|-|+|..|.--++. ...++|-+..
T Consensus 221 c~qtF~ghesDINsv~ffP~G~afatGSDD---~tcRlyDlRa 260 (343)
T KOG0286|consen 221 CVQTFEGHESDINSVRFFPSGDAFATGSDD---ATCRLYDLRA 260 (343)
T ss_pred eeEeecccccccceEEEccCCCeeeecCCC---ceeEEEeecC
Confidence 23444455555543 377888765444332 2456665544
No 266
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=96.69 E-value=0.21 Score=52.55 Aligned_cols=212 Identities=14% Similarity=0.160 Sum_probs=116.7
Q ss_pred eEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec-ccccCc-cceeEEeeCC-eEEEE
Q 004690 176 HLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGV-TASVEWAGNE-ALVYI 252 (736)
Q Consensus 176 ~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~-~~~~~~-~~~~~WspDg-~l~y~ 252 (736)
..|-|.|.-... ...+..+.|.|.-..+ .+...+| ..+||-+|-++...++ ..+... .....|+|+| ..+++
T Consensus 201 krlkDaNa~~ps--~~~I~sv~FHp~~pll-lvaG~d~--~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~ 275 (514)
T KOG2055|consen 201 KRLKDANAAHPS--HGGITSVQFHPTAPLL-LVAGLDG--TLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFT 275 (514)
T ss_pred EeecccccCCcC--cCCceEEEecCCCceE-EEecCCC--cEEEEEecCccChhheeeeeccCccceeeecCCCceEEEe
Confidence 345566654322 2357888998876654 4444445 4667777666555443 233433 3457899999 56666
Q ss_pred EeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce
Q 004690 253 TMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV 332 (736)
Q Consensus 253 ~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~ 332 (736)
+.. ..-+|.+++.+.........-+......-.+..|+|+++|++..+ ...|+++...+++ +..-.+-...+
T Consensus 276 s~r----rky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~---~G~I~lLhakT~e-li~s~KieG~v 347 (514)
T KOG2055|consen 276 SGR----RKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGN---NGHIHLLHAKTKE-LITSFKIEGVV 347 (514)
T ss_pred ccc----ceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEccc---CceEEeehhhhhh-hhheeeeccEE
Confidence 532 224788898776432221111111223334667999999988654 3467888887776 21111222222
Q ss_pred -eEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEE-EEEeCCeeEEEEEEcC
Q 004690 333 -DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAV-YEREGGLQKITTYRLP 408 (736)
Q Consensus 333 -~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~-~~~~~g~~~l~v~~l~ 408 (736)
...|+.||+.|+.... .+.+|..++......+..+ .+..+.-..+++..+.-++ ..++.|. +-||+.+
T Consensus 348 ~~~~fsSdsk~l~~~~~-----~GeV~v~nl~~~~~~~rf~-D~G~v~gts~~~S~ng~ylA~GS~~Gi--VNIYd~~ 417 (514)
T KOG2055|consen 348 SDFTFSSDSKELLASGG-----TGEVYVWNLRQNSCLHRFV-DDGSVHGTSLCISLNGSYLATGSDSGI--VNIYDGN 417 (514)
T ss_pred eeEEEecCCcEEEEEcC-----CceEEEEecCCcceEEEEe-ecCccceeeeeecCCCceEEeccCcce--EEEeccc
Confidence 2348888987776633 3479999997753222222 2223333445544443333 3444443 5677654
No 267
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.67 E-value=0.26 Score=55.12 Aligned_cols=148 Identities=14% Similarity=0.026 Sum_probs=78.7
Q ss_pred EECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCc
Q 004690 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSND 275 (736)
Q Consensus 197 ~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~ 275 (736)
-++|||+.+--. ......+-++|.++.+.... ..++....+.++|||+.+|++.-+......+-.++.++. ..
T Consensus 199 PlpnDGk~l~~~----~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~--d~ 272 (635)
T PRK02888 199 PLPNDGKDLDDP----KKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAER--DW 272 (635)
T ss_pred ccCCCCCEeecc----cceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccC--ce
Confidence 468999977322 22345778889998776543 344444558999999555554321111222333333221 12
Q ss_pred EEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCC----CCceEEeec-cccceeEEEeeeCCEEEEEEcCC
Q 004690 276 ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK----PEELRVLTP-RVVGVDTAASHRGNHFFITRRSD 350 (736)
Q Consensus 276 ~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~----~~~~~~l~~-~~~~~~~~~s~dg~~l~~~t~~~ 350 (736)
..+|.-.. --.+.+||++.++. .+.|-++|..+ +.......+ ...-....++|||+++|+....+
T Consensus 273 ~vvfni~~-----iea~vkdGK~~~V~-----gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS 342 (635)
T PRK02888 273 VVVFNIAR-----IEEAVKAGKFKTIG-----GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLS 342 (635)
T ss_pred EEEEchHH-----HHHhhhCCCEEEEC-----CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCC
Confidence 22221110 01357899988862 45688999887 211222222 11111234899999877664332
Q ss_pred CCCCcEEEEEeCCC
Q 004690 351 ELFNSELLACPVDN 364 (736)
Q Consensus 351 ~~~~~~l~~~~~~~ 364 (736)
..+-++|++.
T Consensus 343 ----~tVSVIDv~k 352 (635)
T PRK02888 343 ----PTVTVIDVRK 352 (635)
T ss_pred ----CcEEEEEChh
Confidence 2355566544
No 268
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.54 E-value=0.13 Score=53.79 Aligned_cols=137 Identities=14% Similarity=0.114 Sum_probs=84.7
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCC-CchhHHHHHHCCcEEEEEcccCCC-CCChhh-
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGG-ELGRQW- 563 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~RG~g-~~g~~~- 563 (736)
+.+++.. ++.+..+ ++.|... ..+.-+||++||.......+. ....+..|.+.||..+.+..+.-- ......
T Consensus 63 e~~~L~~-~~~~fla-L~~~~~~---~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~ 137 (310)
T PF12048_consen 63 EVQWLQA-GEERFLA-LWRPANS---AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA 137 (310)
T ss_pred hcEEeec-CCEEEEE-EEecccC---CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC
Confidence 4455654 5555544 4566543 355679999999554443332 344566889999999998776510 000000
Q ss_pred ------hhccc---------------------cccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC
Q 004690 564 ------YENGK---------------------FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 616 (736)
Q Consensus 564 ------~~~~~---------------------~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~ 616 (736)
..++. .......+.-+.+++.++.+++. .+|+|+|++.|+++++.++...
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~ 214 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEK 214 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcC
Confidence 00000 00111234556677777777763 4599999999999999999887
Q ss_pred CC-ceeEEEEcCCccc
Q 004690 617 PD-LFKAAVAAVPFVD 631 (736)
Q Consensus 617 p~-~~~a~v~~~p~~d 631 (736)
+. .+.+.|+..+...
T Consensus 215 ~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 215 PPPMPDALVLINAYWP 230 (310)
T ss_pred CCcccCeEEEEeCCCC
Confidence 64 3678888887544
No 269
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=96.48 E-value=0.34 Score=48.65 Aligned_cols=210 Identities=14% Similarity=0.125 Sum_probs=104.8
Q ss_pred eecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCee-----ccccc-CccceeEEeeCC-eEEE
Q 004690 179 LDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GKPLV-GVTASVEWAGNE-ALVY 251 (736)
Q Consensus 179 lD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~-----~~~~~-~~~~~~~WspDg-~l~y 251 (736)
||.+.|. +++ -.+..+.||.||+++|-... ...|++|++..=+.+ +..++ +....+.|+||- .+++
T Consensus 77 l~~~~LK-gH~-~~vt~~~FsSdGK~lat~~~-----Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv 149 (420)
T KOG2096|consen 77 LNVSVLK-GHK-KEVTDVAFSSDGKKLATISG-----DRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVV 149 (420)
T ss_pred hhhhhhh-ccC-CceeeeEEcCCCceeEEEeC-----CceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEE
Confidence 5667774 332 35888999999999986654 246888887652211 11122 123458999998 6665
Q ss_pred EEeCCCCCCceEEEEEcCCCC--C-------CcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCce
Q 004690 252 ITMDEILRPDKAWLHKLEADQ--S-------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL 322 (736)
Q Consensus 252 ~~~~~~~~~~~v~~~~l~t~~--~-------~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~ 322 (736)
.... ...|+.+.+.... . .|.+-|++....-.+++.....+++|.-.+ ..+.|.++++.+.. +
T Consensus 150 ~~~~----g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas---~dt~i~lw~lkGq~-L 221 (420)
T KOG2096|consen 150 SVKR----GNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSAS---LDTKICLWDLKGQL-L 221 (420)
T ss_pred EEcc----CCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEec---CCCcEEEEecCCce-e
Confidence 5442 2345555443211 0 122223332222233455555566654322 23457788887543 3
Q ss_pred EEeec-cccceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCce---eeEecCC-CCceeeeEEEeCC-EEEEEEEe
Q 004690 323 RVLTP-RVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET---TVLIPHR-ESVKLQDIQLFID-HLAVYERE 396 (736)
Q Consensus 323 ~~l~~-~~~~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~---~~l~~~~-~~~~i~~~~~~~~-~l~~~~~~ 396 (736)
.-+.. ...+....+||+|+.++...-. +.-+++..=....+.. ..++.-. ...-+..+.+.++ ...+..+.
T Consensus 222 ~~idtnq~~n~~aavSP~GRFia~~gFT---pDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSk 298 (420)
T KOG2096|consen 222 QSIDTNQSSNYDAAVSPDGRFIAVSGFT---PDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSK 298 (420)
T ss_pred eeeccccccccceeeCCCCcEEEEecCC---CCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEec
Confidence 33322 2233345699999866544332 3444443322111111 1122211 1112334444443 34567777
Q ss_pred CCeeEEEEEEcC
Q 004690 397 GGLQKITTYRLP 408 (736)
Q Consensus 397 ~g~~~l~v~~l~ 408 (736)
+|.-+ +|+.+
T Consensus 299 DG~wr--iwdtd 308 (420)
T KOG2096|consen 299 DGKWR--IWDTD 308 (420)
T ss_pred CCcEE--Eeecc
Confidence 88755 45544
No 270
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=96.47 E-value=0.35 Score=52.30 Aligned_cols=240 Identities=9% Similarity=0.034 Sum_probs=132.3
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC-ccceeEEeeCC---eEEEEEeCCCCCCceEEEEEcCC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE---ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~-~~~~~~WspDg---~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
.++||+|..+.|..+. ..++++++.+-+.....+.. ..+.++.||-+ .+++-.-...+.|..|.++....
T Consensus 130 ~~qfs~dEsl~arlv~------nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~ 203 (566)
T KOG2315|consen 130 VPQFSIDESLAARLVS------NEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPE 203 (566)
T ss_pred ccccccchhhhhhhhc------ceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEecccc
Confidence 5789999999988774 45888887763222112221 24558899886 44443333445566676666652
Q ss_pred CCCCcEEEEeecCCce----EEEEEEcCCccEEEEEecC---------cceeEEEEEeCCCCCceEEeeccccceeEEEe
Q 004690 271 DQSNDICLYHEKDDIY----SLGLQASESKKFLFIASES---------KITRFVFYLDVSKPEELRVLTPRVVGVDTAAS 337 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~----~~~~~~S~Dg~~l~~~~~~---------~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s 337 (736)
..... .+. ...| .+...|.+-|.-|++.... -+.+.||+++..+-.....|.+...-..+.|+
T Consensus 204 ~~~~~-~~a---~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~ 279 (566)
T KOG2315|consen 204 EGQHQ-PVA---NKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWS 279 (566)
T ss_pred ccccc-hhh---hccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEEC
Confidence 21111 111 1112 2456799999887765532 13468999998832222333332222345699
Q ss_pred eeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccc
Q 004690 338 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSL 417 (736)
Q Consensus 338 ~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l 417 (736)
++|+.+.++-.-- -..+-..|+.+ ...--++++.. .-.-+.+.++.+++..-.|-...+.+|+... -+
T Consensus 280 ~s~~EF~VvyGfM---PAkvtifnlr~--~~v~df~egpR-N~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n-~K----- 347 (566)
T KOG2315|consen 280 PSGREFAVVYGFM---PAKVTIFNLRG--KPVFDFPEGPR-NTAFFNPHGNIILLAGFGNLPGDMEVWDVPN-RK----- 347 (566)
T ss_pred CCCCEEEEEEecc---cceEEEEcCCC--CEeEeCCCCCc-cceEECCCCCEEEEeecCCCCCceEEEeccc-hh-----
Confidence 9999888876542 23455556554 11113343332 2234667777788777777777899998874 22
Q ss_pred cCCceeeecCcccccCCCCcccCcceEEEEeccCC----CCcEEEEEE
Q 004690 418 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLR----TPPSVYDYD 461 (736)
Q Consensus 418 ~~~~~i~~p~~~~~v~~~~~~~~~~~~~~~~ss~~----~P~~~~~~d 461 (736)
.|.-+....+ ..+.+.+|+..++.+.+++. .--.||.|+
T Consensus 348 ----~i~~~~a~~t-t~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 348 ----LIAKFKAANT-TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred ----hccccccCCc-eEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 2221111111 12446677777766665543 223455554
No 271
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.45 E-value=0.2 Score=48.79 Aligned_cols=195 Identities=12% Similarity=0.130 Sum_probs=106.3
Q ss_pred eEEECC-CCCEEEEEEeC----CCCcEEEEEEEECCCCCeecc--c--ccCccceeEEeeCC-eEEEEEeCCCCCCceEE
Q 004690 195 CFQVSP-DNKLVAYAEDT----KGDEIYTVYVIDIETGTPVGK--P--LVGVTASVEWAGNE-ALVYITMDEILRPDKAW 264 (736)
Q Consensus 195 ~~~~SP-DG~~la~~~~~----~G~e~~~l~v~dl~tg~~~~~--~--~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~ 264 (736)
++++|| -.++||..... .| .-.|+|.++..++-+.. . ..+....++|++.- .++++...+. .|.
T Consensus 13 svqfSPf~~nrLavAt~q~yGl~G--~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDG----SLr 86 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQHYGLAG--NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDG----SLR 86 (311)
T ss_pred eeEecccccchhheeehhhccccc--CceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCc----eEE
Confidence 357787 23334433221 23 24699999964333321 2 22333459999988 6777766432 255
Q ss_pred EEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEE--EeeeCCE
Q 004690 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGNH 342 (736)
Q Consensus 265 ~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~--~s~dg~~ 342 (736)
+++++.+ +.++..|.|.... ..++.|.+-.++++++++-.++-+||..+... .++.... .....|. |+|.-.-
T Consensus 87 l~d~~~~-s~Pi~~~kEH~~E-V~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~--Sv~Tf~g-h~~~Iy~a~~sp~~~n 161 (311)
T KOG0277|consen 87 LFDLTMP-SKPIHKFKEHKRE-VYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN--SVQTFNG-HNSCIYQAAFSPHIPN 161 (311)
T ss_pred EeccCCC-CcchhHHHhhhhh-eEEeccccccceeEEeeccCCceEeecCCCCc--ceEeecC-CccEEEEEecCCCCCC
Confidence 6665543 4466677665322 34778988888888887555666777766543 2344333 2333443 7776555
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEe--CCEEEEEEEeCCeeEEEEEEcC
Q 004690 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 343 l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
++..+..++ ..+|+-++ .++....+-.+. ..+...+|. +..+++....++. |+.|++.
T Consensus 162 lfas~Sgd~--~l~lwdvr--~~gk~~~i~ah~--~Eil~cdw~ky~~~vl~Tg~vd~~--vr~wDir 221 (311)
T KOG0277|consen 162 LFASASGDG--TLRLWDVR--SPGKFMSIEAHN--SEILCCDWSKYNHNVLATGGVDNL--VRGWDIR 221 (311)
T ss_pred eEEEccCCc--eEEEEEec--CCCceeEEEecc--ceeEeecccccCCcEEEecCCCce--EEEEehh
Confidence 655554442 34555444 333332233333 233344444 4566655555543 7778876
No 272
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=96.43 E-value=0.15 Score=54.98 Aligned_cols=142 Identities=11% Similarity=0.101 Sum_probs=83.2
Q ss_pred eeEEECCCCCEEEEEEe----CCCC---cEEEEEEEECCCCCee-cccccCccceeEEeeCC-eEEEEEeCCCCCCceEE
Q 004690 194 GCFQVSPDNKLVAYAED----TKGD---EIYTVYVIDIETGTPV-GKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 264 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~----~~G~---e~~~l~v~dl~tg~~~-~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~ 264 (736)
-.+.|.+-|+-|+.... ..|. ...+||.++.++...+ ++.-++-...+.|+|+| .|..+- +-.|..+-
T Consensus 221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~Vvy---GfMPAkvt 297 (566)
T KOG2315|consen 221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVY---GFMPAKVT 297 (566)
T ss_pred eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEE---ecccceEE
Confidence 35678888987776643 2221 2468999999843332 22334556679999999 554432 23455677
Q ss_pred EEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEec--CcceeEEEEEeCCCCCceEEeec-cccce-eEEEeeeC
Q 004690 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASE--SKITRFVFYLDVSKPEELRVLTP-RVVGV-DTAASHRG 340 (736)
Q Consensus 265 ~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~--~~~~~~l~~~dl~~~~~~~~l~~-~~~~~-~~~~s~dg 340 (736)
.+++... .+++-+..... .+.|+|-|++|++..- -.+.-++| |..+.+ ++.. ...+. .+.|+|||
T Consensus 298 ifnlr~~-----~v~df~egpRN-~~~fnp~g~ii~lAGFGNL~G~mEvw--Dv~n~K---~i~~~~a~~tt~~eW~PdG 366 (566)
T KOG2315|consen 298 IFNLRGK-----PVFDFPEGPRN-TAFFNPHGNIILLAGFGNLPGDMEVW--DVPNRK---LIAKFKAANTTVFEWSPDG 366 (566)
T ss_pred EEcCCCC-----EeEeCCCCCcc-ceEECCCCCEEEEeecCCCCCceEEE--eccchh---hccccccCCceEEEEcCCC
Confidence 7777654 33332211111 3568999999988763 24444555 554432 2322 12222 34599999
Q ss_pred CEEEEEEcC
Q 004690 341 NHFFITRRS 349 (736)
Q Consensus 341 ~~l~~~t~~ 349 (736)
++|+..|..
T Consensus 367 e~flTATTa 375 (566)
T KOG2315|consen 367 EYFLTATTA 375 (566)
T ss_pred cEEEEEecc
Confidence 988877654
No 273
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.42 E-value=0.28 Score=49.58 Aligned_cols=151 Identities=19% Similarity=0.289 Sum_probs=82.9
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCC--cE--EEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceE
Q 004690 189 GFYSVGCFQVSPDNKLVAYAEDTKGD--EI--YTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKA 263 (736)
Q Consensus 189 ~~~~~~~~~~SPDG~~la~~~~~~G~--e~--~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v 263 (736)
.........+.|||+ |-++...... .. -.|+.++.+ ++.... ..-....+++|+||++.+|+.... ..+|
T Consensus 84 ~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~---~~~i 158 (246)
T PF08450_consen 84 PFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSF---NGRI 158 (246)
T ss_dssp CTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETT---TTEE
T ss_pred ccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccc---ccee
Confidence 467788899999999 4444432221 11 579999998 554432 111234569999999555554432 2358
Q ss_pred EEEEcCCCCC--CcEEEEee-cCC-ceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eEEE-e
Q 004690 264 WLHKLEADQS--NDICLYHE-KDD-IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAA-S 337 (736)
Q Consensus 264 ~~~~l~t~~~--~~~~~~~~-~~~-~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~-s 337 (736)
+++++..... ....++.+ ... ..--++....+|+ |++... ....|++++.+ |+....+.-..... ...| .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~--~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg 234 (246)
T PF08450_consen 159 WRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN-LWVADW--GGGRIVVFDPD-GKLLREIELPVPRPTNCAFGG 234 (246)
T ss_dssp EEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEE--TTTEEEEEETT-SCEEEEEE-SSSSEEEEEEES
T ss_pred EEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC-EEEEEc--CCCEEEEECCC-ccEEEEEcCCCCCEEEEEEEC
Confidence 9888864322 12233322 222 1334577888996 444332 44578999987 44122222111222 2335 4
Q ss_pred eeCCEEEEEEc
Q 004690 338 HRGNHFFITRR 348 (736)
Q Consensus 338 ~dg~~l~~~t~ 348 (736)
++.+.||+.+.
T Consensus 235 ~~~~~L~vTta 245 (246)
T PF08450_consen 235 PDGKTLYVTTA 245 (246)
T ss_dssp TTSSEEEEEEB
T ss_pred CCCCEEEEEeC
Confidence 67788888764
No 274
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=96.40 E-value=0.8 Score=46.99 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=94.2
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-c-ccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
.++-.++++|+.+++| .|++.-.-++|++.+|+..-. + -.+......||.||+++-+.. -..+|.++..
T Consensus 65 ~svFavsl~P~~~l~a-----TGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGd----msG~v~v~~~ 135 (399)
T KOG0296|consen 65 DSVFAVSLHPNNNLVA-----TGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGD----MSGKVLVFKV 135 (399)
T ss_pred CceEEEEeCCCCceEE-----ecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecC----CCccEEEEEc
Confidence 3567788999777766 244456789999999985432 2 123355689999997766543 2235788888
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeE-EEeeeCCEEEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITR 347 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t 347 (736)
.++.. ...+..+.+. ..-+.|.|-+..|+..+.+ ..+|...+..+...+.+......+.. .+.|+|++++-..
T Consensus 136 stg~~-~~~~~~e~~d--ieWl~WHp~a~illAG~~D---GsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy 209 (399)
T KOG0296|consen 136 STGGE-QWKLDQEVED--IEWLKWHPRAHILLAGSTD---GSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGY 209 (399)
T ss_pred ccCce-EEEeecccCc--eEEEEecccccEEEeecCC---CcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEe
Confidence 77743 2233323322 1235789988777765544 34688777664313333333223332 3889999887665
Q ss_pred cCCCCCCcEEEEEeCCC
Q 004690 348 RSDELFNSELLACPVDN 364 (736)
Q Consensus 348 ~~~~~~~~~l~~~~~~~ 364 (736)
. ++.|.+.++.+
T Consensus 210 ~-----dgti~~Wn~kt 221 (399)
T KOG0296|consen 210 D-----DGTIIVWNPKT 221 (399)
T ss_pred c-----CceEEEEecCC
Confidence 4 24577777765
No 275
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.39 E-value=0.012 Score=58.81 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=60.4
Q ss_pred EEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHH-HHHHHHHcCCCCCCc
Q 004690 518 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIA-CAEYLIKNCYCTKEK 596 (736)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~r 596 (736)
.|+++|++.|.. ..|...+..|...++.|..+.++|.+... ....+++++++ .++.+..... ..+
T Consensus 2 ~lf~~p~~gG~~--~~y~~la~~l~~~~~~v~~i~~~~~~~~~----------~~~~si~~la~~y~~~I~~~~~--~gp 67 (229)
T PF00975_consen 2 PLFCFPPAGGSA--SSYRPLARALPDDVIGVYGIEYPGRGDDE----------PPPDSIEELASRYAEAIRARQP--EGP 67 (229)
T ss_dssp EEEEESSTTCSG--GGGHHHHHHHTTTEEEEEEECSTTSCTTS----------HEESSHHHHHHHHHHHHHHHTS--SSS
T ss_pred eEEEEcCCccCH--HHHHHHHHhCCCCeEEEEEEecCCCCCCC----------CCCCCHHHHHHHHHHHhhhhCC--CCC
Confidence 578899977743 34777776666656889999998765211 11234455544 3344444322 138
Q ss_pred EEEEEeChHHHHHHHHHHh---CCCceeEEEEcC
Q 004690 597 LCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAV 627 (736)
Q Consensus 597 i~~~G~S~GG~la~~~~~~---~p~~~~a~v~~~ 627 (736)
..++|+|+||.+|..+|.+ .-..+..+++..
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD 101 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEEAGEEVSRLILID 101 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT-SESEEEEES
T ss_pred eeehccCccHHHHHHHHHHHHHhhhccCceEEec
Confidence 9999999999999888754 223355566555
No 276
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.38 E-value=0.25 Score=53.92 Aligned_cols=205 Identities=15% Similarity=0.102 Sum_probs=115.0
Q ss_pred EEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cc-cCccceeEEeeCC-eEEEEE
Q 004690 177 LILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNE-ALVYIT 253 (736)
Q Consensus 177 vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg-~l~y~~ 253 (736)
-+||.-.+. ++| ...-..|| ..+.+|.++. ..+|+|+..+|++..+ .+ .+...++.|+++| .|+.-.
T Consensus 167 rvLDaP~l~--dDf-Y~nlldWs-s~n~laValg------~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~ 236 (484)
T KOG0305|consen 167 RVLDAPGLQ--DDF-YLNLLDWS-SANVLAVALG------QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGT 236 (484)
T ss_pred hhccCCccc--ccH-hhhHhhcc-cCCeEEEEec------ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEee
Confidence 346654443 223 34556899 6667887763 5799999999998765 44 4456779999999 666655
Q ss_pred eCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccce
Q 004690 254 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGV 332 (736)
Q Consensus 254 ~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~ 332 (736)
.+. .|.++++.+. +.+.-+.+........++|. + .++. +... ...|...|+..++ ....+......+
T Consensus 237 ~~g-----~v~iwD~~~~--k~~~~~~~~h~~rvg~laW~--~-~~ls-sGsr-~~~I~~~dvR~~~~~~~~~~~H~qeV 304 (484)
T KOG0305|consen 237 SDG-----TVQIWDVKEQ--KKTRTLRGSHASRVGSLAWN--S-SVLS-SGSR-DGKILNHDVRISQHVVSTLQGHRQEV 304 (484)
T ss_pred cCC-----eEEEEehhhc--cccccccCCcCceeEEEecc--C-ceEE-EecC-CCcEEEEEEecchhhhhhhhccccee
Confidence 443 3677777654 22222222122334456776 2 2222 2221 1233444444433 112122222222
Q ss_pred e-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 333 D-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 333 ~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
. ..|++|+.+|+--.|+ ..++..|...+.....+..+...+..-++++....|+....--....|.+++..
T Consensus 305 CgLkws~d~~~lASGgnD-----N~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~ 376 (484)
T KOG0305|consen 305 CGLKWSPDGNQLASGGND-----NVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN 376 (484)
T ss_pred eeeEECCCCCeeccCCCc-----cceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC
Confidence 2 3599999877544333 356666765443444477777777766777777777655543334467788766
No 277
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.38 E-value=1.3 Score=44.52 Aligned_cols=208 Identities=14% Similarity=0.182 Sum_probs=104.5
Q ss_pred CceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec-ccccCc--cceeEEeeCCeEE
Q 004690 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGV--TASVEWAGNEALV 250 (736)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~-~~~~~~--~~~~~WspDg~l~ 250 (736)
.-++.++.-.+..-. -.+++.+|.||.+.|+.+.+..+ .|+.++++ |+.++ ..+.+. .-++++..+|.++
T Consensus 7 ~y~~~i~~~~l~g~~--~e~SGLTy~pd~~tLfaV~d~~~----~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~v 79 (248)
T PF06977_consen 7 DYRVVIEAKPLPGIL--DELSGLTYNPDTGTLFAVQDEPG----EIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYV 79 (248)
T ss_dssp T-EEEEEEEE-TT----S-EEEEEEETTTTEEEEEETTTT----EEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEE
T ss_pred CcEEEEeeeECCCcc--CCccccEEcCCCCeEEEEECCCC----EEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEE
Confidence 345666644443211 13899999999999887777655 58889986 55554 344442 4458888777554
Q ss_pred EEEeCCCCCCceEEEEEcCCCCCC-cE---EEEe--ec--CCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-c
Q 004690 251 YITMDEILRPDKAWLHKLEADQSN-DI---CLYH--EK--DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-E 321 (736)
Q Consensus 251 y~~~~~~~~~~~v~~~~l~t~~~~-~~---~~~~--~~--~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~ 321 (736)
.+. .+..+|+.++++..... +. .-+. .. +..-+-+++|.+.++.+++.. ......||-++..... .
T Consensus 80 l~~----Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~k-E~~P~~l~~~~~~~~~~~ 154 (248)
T PF06977_consen 80 LSE----ERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAK-ERKPKRLYEVNGFPGGFD 154 (248)
T ss_dssp EEE----TTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEE-ESSSEEEEEEESTT-SS-
T ss_pred EEE----cCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEe-CCCChhhEEEccccCccc
Confidence 443 23357888887443211 11 1111 11 111234789999888877653 3444568888762111 1
Q ss_pred eEEee--ccc------cce-eEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecC------CCCceeeeEEEe
Q 004690 322 LRVLT--PRV------VGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH------RESVKLQDIQLF 386 (736)
Q Consensus 322 ~~~l~--~~~------~~~-~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~------~~~~~i~~~~~~ 386 (736)
..... +.. .+. ...+.|..++||++++.. ..|+.+|.++.-....-+.. ..-.+.++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es----~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d 230 (248)
T PF06977_consen 155 LFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDES----RLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFD 230 (248)
T ss_dssp -EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTT----TEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-
T ss_pred eeeccccccccccceeccccceEEcCCCCeEEEEECCC----CeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEEC
Confidence 11110 000 011 123677788999998875 57888886652111122222 112357899998
Q ss_pred CCEEEEEEEeC
Q 004690 387 IDHLAVYEREG 397 (736)
Q Consensus 387 ~~~l~~~~~~~ 397 (736)
.++-++..++.
T Consensus 231 ~~G~LYIvsEp 241 (248)
T PF06977_consen 231 PDGNLYIVSEP 241 (248)
T ss_dssp TT--EEEEETT
T ss_pred CCCCEEEEcCC
Confidence 87665555553
No 278
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=96.34 E-value=0.51 Score=46.41 Aligned_cols=189 Identities=15% Similarity=0.140 Sum_probs=105.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
+-.+.++.|-+++. .|+..+.+.+||+++|+.+.. ..+...-.+.|+.+| .++++..+....+..|...++..
T Consensus 55 vW~~Did~~s~~li-----TGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~ 129 (327)
T KOG0643|consen 55 VWCCDIDWDSKHLI-----TGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRD 129 (327)
T ss_pred EEEEEecCCcceee-----eccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccC
Confidence 44555566666665 366678999999999998764 334445568999999 67777766666667777777764
Q ss_pred CC----C-CcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecc---ccce-eEEEeeeCC
Q 004690 271 DQ----S-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR---VVGV-DTAASHRGN 341 (736)
Q Consensus 271 ~~----~-~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~---~~~~-~~~~s~dg~ 341 (736)
.. + ++.+....++. -....-|+|-+++|+..-.+ ..|-.+|+.+|. ..+... ...+ ...+++|..
T Consensus 130 ~~~~~~s~ep~~kI~t~~s-kit~a~Wg~l~~~ii~Ghe~---G~is~~da~~g~--~~v~s~~~h~~~Ind~q~s~d~T 203 (327)
T KOG0643|consen 130 DSSDIDSEEPYLKIPTPDS-KITSALWGPLGETIIAGHED---GSISIYDARTGK--ELVDSDEEHSSKINDLQFSRDRT 203 (327)
T ss_pred ChhhhcccCceEEecCCcc-ceeeeeecccCCEEEEecCC---CcEEEEEcccCc--eeeechhhhccccccccccCCcc
Confidence 32 1 22333333332 23356799999998754322 346677887764 122111 1111 123677655
Q ss_pred EEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCC
Q 004690 342 HFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGG 398 (736)
Q Consensus 342 ~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g 398 (736)
++ +...++ .+.+|+ |..+....+....+ ..+.-..+++..+++++..-.++
T Consensus 204 ~F-iT~s~D--ttakl~--D~~tl~v~Kty~te-~PvN~aaisP~~d~VilgGGqeA 254 (327)
T KOG0643|consen 204 YF-ITGSKD--TTAKLV--DVRTLEVLKTYTTE-RPVNTAAISPLLDHVILGGGQEA 254 (327)
T ss_pred eE-EecccC--ccceee--eccceeeEEEeeec-ccccceecccccceEEecCCcee
Confidence 33 333333 244554 33332222222222 22334456666778777655444
No 279
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=96.33 E-value=0.19 Score=57.35 Aligned_cols=166 Identities=13% Similarity=0.033 Sum_probs=95.5
Q ss_pred CCceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec-c-cccCccceeEEeeCC-eE
Q 004690 173 PPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-K-PLVGVTASVEWAGNE-AL 249 (736)
Q Consensus 173 ~~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~-~-~~~~~~~~~~WspDg-~l 249 (736)
+.++.+|+.-++ .+...+++-+|+++|++. +.+.|.+.++.+..... . ..++-...+.+.|.+ -|
T Consensus 86 ~~~~~iL~Rftl-------p~r~~~v~g~g~~iaags-----dD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fL 153 (933)
T KOG1274|consen 86 GEEDTILARFTL-------PIRDLAVSGSGKMIAAGS-----DDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFL 153 (933)
T ss_pred CCccceeeeeec-------cceEEEEecCCcEEEeec-----CceeEEEEeccccchheeecccCCceeeeeEcCCCCEE
Confidence 355556654333 466789999999999754 46789999887654332 1 334445668999999 45
Q ss_pred EEEEeCCCCCCceEEEEEcCCCCCCcEE--EE---eecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEE
Q 004690 250 VYITMDEILRPDKAWLHKLEADQSNDIC--LY---HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV 324 (736)
Q Consensus 250 ~y~~~~~~~~~~~v~~~~l~t~~~~~~~--~~---~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~ 324 (736)
+.+..+. .|+.+++.++...-.+ +. +..+......++|+|+|..+++...+ ..|-+++..+.+....
T Consensus 154 Avss~dG-----~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d---~~Vkvy~r~~we~~f~ 225 (933)
T KOG1274|consen 154 AVSSCDG-----KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVD---NTVKVYSRKGWELQFK 225 (933)
T ss_pred EEEecCc-----eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccC---CeEEEEccCCceehee
Confidence 5555443 4788888765211000 11 11112344568999997666655433 2355566655431111
Q ss_pred eecc-c-ccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCC
Q 004690 325 LTPR-V-VGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 363 (736)
Q Consensus 325 l~~~-~-~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~ 363 (736)
+... . .++. ..|+|.|.+|+..+-. ++|.+.|.+
T Consensus 226 Lr~~~~ss~~~~~~wsPnG~YiAAs~~~-----g~I~vWnv~ 262 (933)
T KOG1274|consen 226 LRDKLSSSKFSDLQWSPNGKYIAASTLD-----GQILVWNVD 262 (933)
T ss_pred ecccccccceEEEEEcCCCcEEeeeccC-----CcEEEEecc
Confidence 2111 1 1122 3599999988766543 346666655
No 280
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=96.33 E-value=0.12 Score=55.05 Aligned_cols=163 Identities=13% Similarity=0.090 Sum_probs=87.9
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc-------cCc-cceeEEeeCC-eEEEEEeCCCCCC
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-------VGV-TASVEWAGNE-ALVYITMDEILRP 260 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~-------~~~-~~~~~WspDg-~l~y~~~~~~~~~ 260 (736)
.+.+..-.|.|+.+-...+....| +|++||++.-+.....+ ..+ ....+|++|| .|+-...|..
T Consensus 268 ia~lt~g~whP~~k~~FlT~s~Dg----tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGS--- 340 (641)
T KOG0772|consen 268 IAELTCGCWHPDNKEEFLTCSYDG----TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGS--- 340 (641)
T ss_pred eeeeeccccccCcccceEEecCCC----cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCc---
Confidence 456888899999998888877666 59999987543221111 111 3457999999 4544333332
Q ss_pred ceEEEEEcCCCCCCcEEEEee-cCC-ceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ce---EEeeccccceeE
Q 004690 261 DKAWLHKLEADQSNDICLYHE-KDD-IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-EL---RVLTPRVVGVDT 334 (736)
Q Consensus 261 ~~v~~~~l~t~~~~~~~~~~~-~~~-~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~---~~l~~~~~~~~~ 334 (736)
|-.|+.+.-.......+.. ..+ .-..++.||.||++|+-.+.+ + .|-++||...+ ++ .-|.....+..+
T Consensus 341 --IQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D-~--tLKvWDLrq~kkpL~~~tgL~t~~~~tdc 415 (641)
T KOG0772|consen 341 --IQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFD-D--TLKVWDLRQFKKPLNVRTGLPTPFPGTDC 415 (641)
T ss_pred --eeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCC-C--ceeeeeccccccchhhhcCCCccCCCCcc
Confidence 3333444322222222222 122 123468899999998643322 2 34555665543 11 112223334455
Q ss_pred EEeeeCCEEEEEEcC-CCCCCcEEEEEeCCC
Q 004690 335 AASHRGNHFFITRRS-DELFNSELLACPVDN 364 (736)
Q Consensus 335 ~~s~dg~~l~~~t~~-~~~~~~~l~~~~~~~ 364 (736)
-|||+.+.|+--+.. ++...+.|+.++.-+
T Consensus 416 ~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 416 CFSPDDKLILTGTSAPNGMTAGTLFFFDRMT 446 (641)
T ss_pred ccCCCceEEEecccccCCCCCceEEEEeccc
Confidence 699987644433332 122334677777544
No 281
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=96.31 E-value=0.46 Score=49.75 Aligned_cols=151 Identities=13% Similarity=0.141 Sum_probs=92.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccccc---Cc-cceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GV-TASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~---~~-~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
+......|.|.|+....++ ..+-+.|+.+|..+..... ++ ..+.++.|||-|+-+...+ ..|..+++
T Consensus 306 V~~ls~h~tgeYllsAs~d-----~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d----~~vkiwdl 376 (506)
T KOG0289|consen 306 VTGLSLHPTGEYLLSASND-----GTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPD----GVVKIWDL 376 (506)
T ss_pred ceeeeeccCCcEEEEecCC-----ceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCC----ceEEEEEc
Confidence 5677888999999877663 2466778888876543211 12 5668999999554443322 35777788
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEee-cc-ccceeEEEeeeCCEEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PR-VVGVDTAASHRGNHFFIT 346 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~-~~-~~~~~~~~s~dg~~l~~~ 346 (736)
.+. ....-|.+.. .-.-.++||.+|=||+..+++.. |.+.||..-+..+.+. +. .+-..+.++..|..|.+.
T Consensus 377 ks~--~~~a~Fpght-~~vk~i~FsENGY~Lat~add~~---V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~ 450 (506)
T KOG0289|consen 377 KSQ--TNVAKFPGHT-GPVKAISFSENGYWLATAADDGS---VKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA 450 (506)
T ss_pred CCc--cccccCCCCC-CceeEEEeccCceEEEEEecCCe---EEEEEehhhcccceeeccccccceeEEEcCCCCeEEee
Confidence 765 2333443322 22336889999999988765532 7888887644122222 22 112245688888877766
Q ss_pred EcCCCCCCcEEEEEeCC
Q 004690 347 RRSDELFNSELLACPVD 363 (736)
Q Consensus 347 t~~~~~~~~~l~~~~~~ 363 (736)
.+ ..++|.++-.
T Consensus 451 g~-----~l~Vy~~~k~ 462 (506)
T KOG0289|consen 451 GS-----DLQVYICKKK 462 (506)
T ss_pred cc-----eeEEEEEecc
Confidence 22 3577777643
No 282
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.25 E-value=0.063 Score=59.01 Aligned_cols=140 Identities=15% Similarity=0.096 Sum_probs=73.9
Q ss_pred EEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCC-C--------c--------hhHHHHHHCCcEEEEE
Q 004690 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-F--------N--------SSRLSLLDRGFIFAIA 551 (736)
Q Consensus 489 ~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~-~--------~--------~~~~~l~~~G~~v~~~ 551 (736)
+.+....+..+..+++..++. ....|+||++.||+|.+.... | . .....|.+. ..++.+
T Consensus 16 l~~~~~~~~~lfyw~~~s~~~---~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~i 91 (415)
T PF00450_consen 16 LPVNDNENAHLFYWFFESRND---PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFI 91 (415)
T ss_dssp EEECTTTTEEEEEEEEE-SSG---GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE
T ss_pred EecCCCCCcEEEEEEEEeCCC---CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEE
Confidence 344444567787775544432 356799999999998753210 0 0 011234333 668888
Q ss_pred cccCCCCCChhhhhccccccCcChHHHHHHHHHHH-HHcCCCCCCcEEEEEeChHHHHHHHHHH----hC------CCce
Q 004690 552 QIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL-IKNCYCTKEKLCIEGRSAGGLLIGAVLN----MR------PDLF 620 (736)
Q Consensus 552 d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~ri~~~G~S~GG~la~~~~~----~~------p~~~ 620 (736)
|.+-+.|+...-........-....+|+..++... ...+.....++.|.|.|+||..+-.+|. +. +-.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 97755555432221111111122344554444433 3334445568999999999987655443 33 2348
Q ss_pred eEEEEcCCccch
Q 004690 621 KAAVAAVPFVDV 632 (736)
Q Consensus 621 ~a~v~~~p~~d~ 632 (736)
+++++..|++|.
T Consensus 172 kGi~IGng~~dp 183 (415)
T PF00450_consen 172 KGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEESE-SBH
T ss_pred ccceecCccccc
Confidence 999999999885
No 283
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=96.22 E-value=0.065 Score=61.97 Aligned_cols=116 Identities=17% Similarity=0.126 Sum_probs=66.6
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeCCeEEEEEeCCCCCCceEEEEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~ 267 (736)
..+....||||++++|-..- ...|.+|+..+.+... .+.+ ..-+++|-|-|+++-+..++ +.-+||+
T Consensus 130 ~DV~Dv~Wsp~~~~lvS~s~-----DnsViiwn~~tF~~~~-vl~~H~s~VKGvs~DP~Gky~ASqsdD--rtikvwr-- 199 (942)
T KOG0973|consen 130 SDVLDVNWSPDDSLLVSVSL-----DNSVIIWNAKTFELLK-VLRGHQSLVKGVSWDPIGKYFASQSDD--RTLKVWR-- 199 (942)
T ss_pred CccceeccCCCccEEEEecc-----cceEEEEccccceeee-eeecccccccceEECCccCeeeeecCC--ceEEEEE--
Confidence 35788999999999984432 4679999999886544 3332 24459999999544444332 2234454
Q ss_pred cCC-CCCC-cEEEEeec-CCceEEEEEEcCCccEEEEEe-cCcceeEEEEEeC
Q 004690 268 LEA-DQSN-DICLYHEK-DDIYSLGLQASESKKFLFIAS-ESKITRFVFYLDV 316 (736)
Q Consensus 268 l~t-~~~~-~~~~~~~~-~~~~~~~~~~S~Dg~~l~~~~-~~~~~~~l~~~dl 316 (736)
+.. +-.+ -...|++. -..++..++|||||+||+..- -....+-+-+++.
T Consensus 200 t~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR 252 (942)
T KOG0973|consen 200 TSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIER 252 (942)
T ss_pred cccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEec
Confidence 221 1000 01122221 234677899999999987533 2233333444444
No 284
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=96.17 E-value=0.2 Score=51.24 Aligned_cols=198 Identities=11% Similarity=0.069 Sum_probs=107.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccc--ccCccceeEEeeCC-e-EEEEEeC--------CCCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNE-A-LVYITMD--------EILR 259 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~--~~~~~~~~~WspDg-~-l~y~~~~--------~~~~ 259 (736)
.+..++|.+ ..++|.+-... -.++++|-....+..+. .......++|-|-+ + |+..... ....
T Consensus 100 dlr~~aWhq--H~~~fava~nd---dvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln 174 (445)
T KOG2139|consen 100 DLRGVAWHQ--HIIAFAVATND---DVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLN 174 (445)
T ss_pred ceeeEeech--hhhhhhhhccC---cEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccc
Confidence 467788887 55566554322 46777777664443331 11123458999998 4 4433221 1111
Q ss_pred CceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEee-cccccee-EEEe
Q 004690 260 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVD-TAAS 337 (736)
Q Consensus 260 ~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~-~~~~~~~-~~~s 337 (736)
..+..+ .++. ....++..+......+..|.+||..++ ..+.+.+.+.+.|.+++. -.+|. .+..++. .-||
T Consensus 175 ~~r~~~--~~s~--~~~qvl~~pgh~pVtsmqwn~dgt~l~--tAS~gsssi~iWdpdtg~-~~pL~~~glgg~slLkwS 247 (445)
T KOG2139|consen 175 ANRNIR--MMST--HHLQVLQDPGHNPVTSMQWNEDGTILV--TASFGSSSIMIWDPDTGQ-KIPLIPKGLGGFSLLKWS 247 (445)
T ss_pred cccccc--cccc--cchhheeCCCCceeeEEEEcCCCCEEe--ecccCcceEEEEcCCCCC-cccccccCCCceeeEEEc
Confidence 111111 1111 122344444434455788999998764 334455667778888876 44444 4455654 4599
Q ss_pred eeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 338 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 338 ~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
|||++|+..+-+. .++|+...-. -...+|+...+ .++...|+..+-.+.+.--+.+.++-..++
T Consensus 248 Pdgd~lfaAt~da---vfrlw~e~q~-wt~erw~lgsg---rvqtacWspcGsfLLf~~sgsp~lysl~f~ 311 (445)
T KOG2139|consen 248 PDGDVLFAATCDA---VFRLWQENQS-WTKERWILGSG---RVQTACWSPCGSFLLFACSGSPRLYSLTFD 311 (445)
T ss_pred CCCCEEEEecccc---eeeeehhccc-ceecceeccCC---ceeeeeecCCCCEEEEEEcCCceEEEEeec
Confidence 9999887766543 4667632211 11345666554 566766766543333444466676666555
No 285
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.15 E-value=0.97 Score=48.94 Aligned_cols=200 Identities=13% Similarity=0.101 Sum_probs=110.7
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
-.+..++++|+++..... . ...+.++|.++...... .....-.+++++||+..+|+..... ....+...+-.+.
T Consensus 76 p~~i~v~~~~~~vyv~~~-~---~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~-~~~~vsvid~~t~ 150 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTG-D---SNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGN-GNNTVSVIDAATN 150 (381)
T ss_pred ccceeeCCCCCeEEEecC-C---CCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEeccc-CCceEEEEeCCCC
Confidence 346688889987643332 2 24689999777665543 2222345689999995555554321 3445676666554
Q ss_pred CCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEE------eeccccceeEEEeeeCCEEEE
Q 004690 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV------LTPRVVGVDTAASHRGNHFFI 345 (736)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~------l~~~~~~~~~~~s~dg~~l~~ 345 (736)
... ..++.+..+ ..+..+|+|+.+++.. ...+.|.++|..+.. ... +.....-....++++|..+|+
T Consensus 151 ~~~-~~~~vG~~P---~~~a~~p~g~~vyv~~--~~~~~v~vi~~~~~~-v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV 223 (381)
T COG3391 151 KVT-ATIPVGNTP---TGVAVDPDGNKVYVTN--SDDNTVSVIDTSGNS-VVRGSVGSLVGVGTGPAGIAVDPDGNRVYV 223 (381)
T ss_pred eEE-EEEecCCCc---ceEEECCCCCeEEEEe--cCCCeEEEEeCCCcc-eeccccccccccCCCCceEEECCCCCEEEE
Confidence 221 113322223 4678899999988765 455678888876654 221 111111112348899998887
Q ss_pred EEcCCCCCCcEEEEEeCCCCCceeeEecCCCC-ceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 346 TRRSDELFNSELLACPVDNTSETTVLIPHRES-VKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 346 ~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~-~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
.-...+ ...+..++........+..+.... .....+.+.+..+++.... ...+.+.+..
T Consensus 224 ~~~~~~--~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~--~~~V~vid~~ 283 (381)
T COG3391 224 ANDGSG--SNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQ--GGTVSVIDGA 283 (381)
T ss_pred EeccCC--CceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecC--CCeEEEEeCC
Confidence 765542 467888887663222222222221 1122344555555544333 3456666554
No 286
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=96.11 E-value=0.77 Score=44.76 Aligned_cols=176 Identities=13% Similarity=0.124 Sum_probs=101.5
Q ss_pred EEEEEEEECCCCCeecc-c-ccCccceeEEeeCCe-EEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEE
Q 004690 216 IYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEA-LVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQA 292 (736)
Q Consensus 216 ~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg~-l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~ 292 (736)
..+|++|.+.||.=... . .+.-...++-+||++ |+-.. ...|.++++.+....++.-|+.... ....+.|
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~------~qhvRlyD~~S~np~Pv~t~e~h~k-NVtaVgF 91 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG------NQHVRLYDLNSNNPNPVATFEGHTK-NVTAVGF 91 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc------CCeeEEEEccCCCCCceeEEeccCC-ceEEEEE
Confidence 36899999999975431 2 223356688999984 44322 2357888998876556666765533 3346778
Q ss_pred cCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeE-EEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeE
Q 004690 293 SESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVL 371 (736)
Q Consensus 293 S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l 371 (736)
--||+|++-. ++.++-+|| |+.... ..++......+.. ...|+...| |+.+.+ +.|...|+........+
T Consensus 92 ~~dgrWMyTg-seDgt~kIW--dlR~~~-~qR~~~~~spVn~vvlhpnQteL-is~dqs----g~irvWDl~~~~c~~~l 162 (311)
T KOG0315|consen 92 QCDGRWMYTG-SEDGTVKIW--DLRSLS-CQRNYQHNSPVNTVVLHPNQTEL-ISGDQS----GNIRVWDLGENSCTHEL 162 (311)
T ss_pred eecCeEEEec-CCCceEEEE--eccCcc-cchhccCCCCcceEEecCCcceE-EeecCC----CcEEEEEccCCcccccc
Confidence 9999998654 444445555 444433 2333322222222 245555555 444443 45677777653333446
Q ss_pred ecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004690 372 IPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
+|+. +..+..+.+..|+-.+..-. .....++|++..
T Consensus 163 iPe~-~~~i~sl~v~~dgsml~a~n-nkG~cyvW~l~~ 198 (311)
T KOG0315|consen 163 IPED-DTSIQSLTVMPDGSMLAAAN-NKGNCYVWRLLN 198 (311)
T ss_pred CCCC-CcceeeEEEcCCCcEEEEec-CCccEEEEEccC
Confidence 7665 46677777666544333322 223588898864
No 287
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=96.09 E-value=0.073 Score=61.45 Aligned_cols=89 Identities=21% Similarity=0.299 Sum_probs=53.8
Q ss_pred EEeeEEECCCCCEEEE-EEeCCCCcEEEEEEEECCCCC--eecccccCccceeEE--eeCC--eEEEEEeCCCCC-----
Q 004690 192 SVGCFQVSPDNKLVAY-AEDTKGDEIYTVYVIDIETGT--PVGKPLVGVTASVEW--AGNE--ALVYITMDEILR----- 259 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~-~~~~~G~e~~~l~v~dl~tg~--~~~~~~~~~~~~~~W--spDg--~l~y~~~~~~~~----- 259 (736)
.+-.|.|||||++||| +.-++=+....||+.||.+.. .+.+..+++.- +.| ..+| .|.|++....+.
T Consensus 351 ~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aai-prwrv~e~gdt~ivyv~~a~nn~d~~~~ 429 (912)
T TIGR02171 351 SVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAI-PRWRVLENGDTVIVYVSDASNNKDDATF 429 (912)
T ss_pred ceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccc-cceEecCCCCeEEEEEcCCCCCcchhhh
Confidence 4567999999999999 544440115779999998643 34445555433 566 5777 488988744332
Q ss_pred -CceEEEEEcCCCC-CCcEEEEee
Q 004690 260 -PDKAWLHKLEADQ-SNDICLYHE 281 (736)
Q Consensus 260 -~~~v~~~~l~t~~-~~~~~~~~~ 281 (736)
...-|......+. .++..+|.+
T Consensus 430 ~~~stw~v~f~~gkfg~p~kl~dg 453 (912)
T TIGR02171 430 AAYSTWQVPFANGKFGTPKKLFDG 453 (912)
T ss_pred hhcceEEEEecCCCCCCchhhhcc
Confidence 2344555554331 234455543
No 288
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.07 E-value=1.7 Score=52.11 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=77.3
Q ss_pred EeeEEECCC-CCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cc-cCccceeEEee-CCeEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAG-NEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPD-G~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~Wsp-Dg~l~y~~~~~~~~~~~v~~~~l 268 (736)
+..+.|+|. +++||- .... ..|++||+.+++.+.. .. .+....++|+| |+.++.+...+ ..|.++++
T Consensus 535 v~~l~~~~~~~~~las-~~~D----g~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~D----g~v~iWd~ 605 (793)
T PLN00181 535 LSGICWNSYIKSQVAS-SNFE----GVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDD----GSVKLWSI 605 (793)
T ss_pred eeeEEeccCCCCEEEE-EeCC----CeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCC----CEEEEEEC
Confidence 456778774 566553 3333 3799999998876542 11 22345689997 55666665433 24778888
Q ss_pred CCCCCCcEEEEeecCCceEEEEEE-cCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccceeEE-EeeeCCEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQA-SESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTA-ASHRGNHFFI 345 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~-S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~~~-~s~dg~~l~~ 345 (736)
.++ .....+... .....+.| +++|.+|+..+.+ ..|+++|+..+. ....+......+... |. +++.|+.
T Consensus 606 ~~~--~~~~~~~~~--~~v~~v~~~~~~g~~latgs~d---g~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs 677 (793)
T PLN00181 606 NQG--VSIGTIKTK--ANICCVQFPSESGRSLAFGSAD---HKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVS 677 (793)
T ss_pred CCC--cEEEEEecC--CCeEEEEEeCCCCCEEEEEeCC---CeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEE
Confidence 765 222233222 12234566 5678887765533 357888887654 233333333333332 53 5665544
Q ss_pred EE
Q 004690 346 TR 347 (736)
Q Consensus 346 ~t 347 (736)
.+
T Consensus 678 ~s 679 (793)
T PLN00181 678 SS 679 (793)
T ss_pred EE
Confidence 43
No 289
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.07 E-value=0.44 Score=50.56 Aligned_cols=135 Identities=16% Similarity=0.116 Sum_probs=85.2
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcC-Cccchhhhcc----CC--CCCCcccccc-----
Q 004690 582 CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV-PFVDVLTTML----DP--TIPLTTAEWE----- 649 (736)
Q Consensus 582 ~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~-p~~d~~~~~~----~~--~~p~~~~~~~----- 649 (736)
+-+++.+....+.++.+|.|.|==|..+..+|+- ..+++|+|..+ +++++...+. .. .-+.....|-
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~ 237 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGIT 237 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCch
Confidence 3334455545677999999999999998888875 45777777554 4555443211 00 1111111111
Q ss_pred --------------ccc-----cccccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHH
Q 004690 650 --------------VKA-----QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 710 (736)
Q Consensus 650 --------------i~~-----~~~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 710 (736)
+.+ ...-|-||+.|.+|+...+..+.-++..|...+ .++..|+++|.... ...
T Consensus 238 ~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K------~lr~vPN~~H~~~~--~~~ 309 (367)
T PF10142_consen 238 QQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEK------YLRYVPNAGHSLIG--SDV 309 (367)
T ss_pred hhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCe------eEEeCCCCCcccch--HHH
Confidence 111 124569999999999999999999999986422 34555799998754 222
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 004690 711 LREAAFTYTFLMRALSML 728 (736)
Q Consensus 711 ~~~~a~~~~fl~~~l~~~ 728 (736)
...+.+|+...+...
T Consensus 310 ---~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 310 ---VQSLRAFYNRIQNGR 324 (367)
T ss_pred ---HHHHHHHHHHHHcCC
Confidence 233678888865443
No 290
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.07 E-value=0.18 Score=55.01 Aligned_cols=154 Identities=13% Similarity=0.041 Sum_probs=93.3
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec-c-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-K-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~-~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~ 267 (736)
..+-+.+||+||+++| .|+-...+.|||..+.++.. . ....++-.++|+|=- .|+-+..... ...+..++
T Consensus 302 qeVCgLkws~d~~~lA-----SGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~--D~~i~fwn 374 (484)
T KOG0305|consen 302 QEVCGLKWSPDGNQLA-----SGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSA--DRCIKFWN 374 (484)
T ss_pred ceeeeeEECCCCCeec-----cCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCc--ccEEEEEE
Confidence 3577889999999998 34445789999995544332 1 223334458999987 6766654332 34566777
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcc-eeEEEEEeCCCCCceEEeeccccceeE-EEeeeCCEEEE
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFI 345 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~-~~~l~~~dl~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~ 345 (736)
.-++.. +-.-.......++.||+..+.|+.+..... .-.||.++. -+....+..+..-+.+ .++|||..++.
T Consensus 375 ~~~g~~----i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps--~~~~~~l~gH~~RVl~la~SPdg~~i~t 448 (484)
T KOG0305|consen 375 TNTGAR----IDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS--MKLVAELLGHTSRVLYLALSPDGETIVT 448 (484)
T ss_pred cCCCcE----ecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc--cceeeeecCCcceeEEEEECCCCCEEEE
Confidence 766521 111112234568899999999877654332 234555543 3223444554444444 48999998877
Q ss_pred EEcCCCCCCcEEEEE
Q 004690 346 TRRSDELFNSELLAC 360 (736)
Q Consensus 346 ~t~~~~~~~~~l~~~ 360 (736)
.+.++ +.+++.+
T Consensus 449 ~a~DE---Tlrfw~~ 460 (484)
T KOG0305|consen 449 GAADE---TLRFWNL 460 (484)
T ss_pred ecccC---cEEeccc
Confidence 76654 5556554
No 291
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.06 E-value=0.12 Score=51.70 Aligned_cols=130 Identities=10% Similarity=0.033 Sum_probs=85.2
Q ss_pred EEEEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCC----CCCchhHHHHHHCCcEEEEEcccCCCCCChh
Q 004690 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND----PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (736)
Q Consensus 487 ~~~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 562 (736)
++..+.+.-|. |.+.+.- +++++.|++|..|.-.-.... ....+.++.+.++ |.+.-+|.+|+-+-...
T Consensus 23 ~e~~V~T~~G~-v~V~V~G-----d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~ 95 (326)
T KOG2931|consen 23 QEHDVETAHGV-VHVTVYG-----DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPS 95 (326)
T ss_pred eeeeecccccc-EEEEEec-----CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCcc
Confidence 44445555563 5554332 233467899999984322211 1123556778888 99999999987543222
Q ss_pred hhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCc
Q 004690 563 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (736)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~ 629 (736)
+.+ ..---+++|+.+-+..+.+.-.. +.|..+|--+|+++.+..|..+|+++-++|+..+.
T Consensus 96 ~p~----~y~yPsmd~LAd~l~~VL~~f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 96 FPE----GYPYPSMDDLADMLPEVLDHFGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred CCC----CCCCCCHHHHHHHHHHHHHhcCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 221 11134567777777666665333 67999999999999999999999999999987753
No 292
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.05 E-value=2.4 Score=51.26 Aligned_cols=116 Identities=10% Similarity=0.088 Sum_probs=68.5
Q ss_pred EEEEEEcCCccEEEEEecC--cc-eeEEEEEeCCCCCceEEeecccccee--EEEeeeCCEEEEEEcCCCCCCcEEEEEe
Q 004690 287 SLGLQASESKKFLFIASES--KI-TRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACP 361 (736)
Q Consensus 287 ~~~~~~S~Dg~~l~~~~~~--~~-~~~l~~~dl~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~t~~~~~~~~~l~~~~ 361 (736)
.+.++|-.||+|+++++-. .+ ...+.+.+.+ |+ +.-.....++.+ ..|-|.|+.|+-..... ....|....
T Consensus 212 ~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~-L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~--~~~~VvFfE 287 (928)
T PF04762_consen 212 RVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GE-LQSTSEPVDGLEGALSWRPSGNLIASSQRLP--DRHDVVFFE 287 (928)
T ss_pred ceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ce-EEeccccCCCccCCccCCCCCCEEEEEEEcC--CCcEEEEEe
Confidence 4578999999999998852 23 3455566655 44 444444444544 34889999777666543 346777776
Q ss_pred CCCCCceeeEecC-CCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 362 VDNTSETTVLIPH-RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 362 ~~~~~~~~~l~~~-~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
-+|.....-.++. ..+..+..+.|..+.-++...-.. .+.+|...
T Consensus 288 rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~--~vqLWt~~ 333 (928)
T PF04762_consen 288 RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLED--RVQLWTRS 333 (928)
T ss_pred cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecC--CceEEEee
Confidence 6653222222332 334567788888875443333222 26666654
No 293
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.04 E-value=0.062 Score=54.30 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=64.2
Q ss_pred CCCCcEEEEecCCCCcC---CCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHc
Q 004690 513 DGSDPLLLYGYGSYEIC---NDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 589 (736)
Q Consensus 513 ~~~~P~vl~~hGg~~~~---~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 589 (736)
+++.|+||-.|--.-+. ...-|...........+.++-+|.+|+.+-...... + ...-+++++.+.+..+.+.
T Consensus 20 ~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~-~---y~yPsmd~LAe~l~~Vl~~ 95 (283)
T PF03096_consen 20 KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE-G---YQYPSMDQLAEMLPEVLDH 95 (283)
T ss_dssp -TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T-T--------HHHHHCTHHHHHHH
T ss_pred CCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc-c---ccccCHHHHHHHHHHHHHh
Confidence 34689999999732211 111222233344556799999999998763333221 1 1123556666666555554
Q ss_pred CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCcc
Q 004690 590 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (736)
Q Consensus 590 ~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~ 630 (736)
-.+ +.+..+|--+|+++-+..|..+|+++-++|+..|..
T Consensus 96 f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 96 FGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTC 134 (283)
T ss_dssp HT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---
T ss_pred CCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCC
Confidence 333 679999999999999999999999999999988753
No 294
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.02 E-value=0.73 Score=47.81 Aligned_cols=201 Identities=17% Similarity=0.158 Sum_probs=99.9
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
...+++|.|||++.+.--.. ...+-|+|++.++.+.. .+++|..-+-|.++ .|+-...|. .+....|+..
T Consensus 97 ~~~~~ls~dgk~~~V~N~TP---a~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~-~F~~lC~DG-----sl~~v~Ld~~ 167 (342)
T PF06433_consen 97 KNMFALSADGKFLYVQNFTP---ATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNR-GFSMLCGDG-----SLLTVTLDAD 167 (342)
T ss_dssp GGGEEE-TTSSEEEEEEESS---SEEEEEEETTTTEEEEEEEGTSEEEEEEEETT-EEEEEETTS-----CEEEEEETST
T ss_pred ccceEEccCCcEEEEEccCC---CCeEEEEECCCCceeeeecCCCEEEEEecCCC-ceEEEecCC-----ceEEEEECCC
Confidence 45678999999986543322 36799999999998764 66777553444443 233333232 1334444432
Q ss_pred CCCcE---EEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-----ceEEeeccc--c-----cee-EE
Q 004690 272 QSNDI---CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-----ELRVLTPRV--V-----GVD-TA 335 (736)
Q Consensus 272 ~~~~~---~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-----~~~~l~~~~--~-----~~~-~~ 335 (736)
..+.. .+|...++..+....++.++.+++|.+- ...||.+++.+.. ++..++... . |.+ ..
T Consensus 168 Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy---~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A 244 (342)
T PF06433_consen 168 GKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSY---EGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIA 244 (342)
T ss_dssp SSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBT---TSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EE
T ss_pred CCEeEeeccccCCCCcccccccceECCCCeEEEEec---CCEEEEEeccCCcccccCcccccCccccccCcCCcceeeee
Confidence 21111 1332222223335566666555555443 3467888887765 112222111 1 112 23
Q ss_pred EeeeCCEEEEEEcCCC-----CCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCC--EEEEEEEeCCeeEEEEEEcC
Q 004690 336 ASHRGNHFFITRRSDE-----LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 336 ~s~dg~~l~~~t~~~~-----~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~--~l~~~~~~~g~~~l~v~~l~ 408 (736)
+.+..++||++-+... .+...|+.+|+.+..... .++-. ..+.++.++.+ -+++... .+...|.+++..
T Consensus 245 ~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~-Ri~l~--~~~~Si~Vsqd~~P~L~~~~-~~~~~l~v~D~~ 320 (342)
T PF06433_consen 245 YHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVA-RIPLE--HPIDSIAVSQDDKPLLYALS-AGDGTLDVYDAA 320 (342)
T ss_dssp EETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEE-EEEEE--EEESEEEEESSSS-EEEEEE-TTTTEEEEEETT
T ss_pred eccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEE-EEeCC--CccceEEEccCCCcEEEEEc-CCCCeEEEEeCc
Confidence 5556778888765421 244689999987632211 22211 12335555554 2333322 233457788776
Q ss_pred C
Q 004690 409 A 409 (736)
Q Consensus 409 ~ 409 (736)
.
T Consensus 321 t 321 (342)
T PF06433_consen 321 T 321 (342)
T ss_dssp T
T ss_pred C
Confidence 3
No 295
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.96 E-value=1.5 Score=44.90 Aligned_cols=63 Identities=21% Similarity=0.141 Sum_probs=41.9
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc--cCc-cceeEEeeCC-eEEE
Q 004690 189 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGV-TASVEWAGNE-ALVY 251 (736)
Q Consensus 189 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~--~~~-~~~~~WspDg-~l~y 251 (736)
+....+--.+||||++|.-+.+.-.+.+-.|-|+|++.+-.+..++ .++ -..+.|.||| +|+.
T Consensus 49 gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvV 115 (305)
T PF07433_consen 49 GRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVV 115 (305)
T ss_pred CCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEE
Confidence 4444566789999999877766554456789999999433332233 233 3458999999 6654
No 296
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=95.95 E-value=1.3 Score=47.01 Aligned_cols=151 Identities=11% Similarity=0.091 Sum_probs=86.6
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc-cCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
..+....|+-||..||+... .-.+++|+..++....+.. .+-..++.|+.+| .|+-...|. ...+++.
T Consensus 236 kdVT~L~Wn~~G~~LatG~~-----~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~-----ttilwd~ 305 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSE-----DGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDG-----TTILWDA 305 (524)
T ss_pred CCcceEEecCCCCeEEEeec-----CcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCc-----cEEEEec
Confidence 45888999999999998764 3368999988776654422 2334459999999 555433332 3556676
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeE-EEeeeCCEEEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITR 347 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t 347 (736)
-++ +....|+.... -.+++.|-.+.++ ..+.....-.||.++.+.+ ...+......+.. .|.|.|..|.-.+
T Consensus 306 ~~g--~~~q~f~~~s~-~~lDVdW~~~~~F--~ts~td~~i~V~kv~~~~P--~~t~~GH~g~V~alk~n~tg~LLaS~S 378 (524)
T KOG0273|consen 306 HTG--TVKQQFEFHSA-PALDVDWQSNDEF--ATSSTDGCIHVCKVGEDRP--VKTFIGHHGEVNALKWNPTGSLLASCS 378 (524)
T ss_pred cCc--eEEEeeeeccC-CccceEEecCceE--eecCCCceEEEEEecCCCc--ceeeecccCceEEEEECCCCceEEEec
Confidence 555 23344443221 1235667655553 2233333345566665543 4455555555543 3777777444443
Q ss_pred cCCCCCCcEEEEEe
Q 004690 348 RSDELFNSELLACP 361 (736)
Q Consensus 348 ~~~~~~~~~l~~~~ 361 (736)
+ ++ ..+|+-+.
T Consensus 379 d-D~--TlkiWs~~ 389 (524)
T KOG0273|consen 379 D-DG--TLKIWSMG 389 (524)
T ss_pred C-CC--eeEeeecC
Confidence 3 32 45666543
No 297
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=95.95 E-value=0.29 Score=49.38 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=58.1
Q ss_pred EEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCce
Q 004690 290 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSET 368 (736)
Q Consensus 290 ~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~ 368 (736)
++||+|..|++ +.++.-.+.+|+.|+...+ +..+.-...-+. +.|+|..-+|++.+.. .+||.....+ .
T Consensus 324 lafs~Ds~y~a-Trnd~~PnalW~Wdlq~l~-l~avLiQk~piraf~WdP~~prL~vctg~-----srLY~W~psg---~ 393 (447)
T KOG4497|consen 324 LAFSCDSTYAA-TRNDKYPNALWLWDLQNLK-LHAVLIQKHPIRAFEWDPGRPRLVVCTGK-----SRLYFWAPSG---P 393 (447)
T ss_pred eeecCCceEEe-eecCCCCceEEEEechhhh-hhhhhhhccceeEEEeCCCCceEEEEcCC-----ceEEEEcCCC---c
Confidence 78999998865 5677777889999998765 322222223344 3488887788888654 4688887665 2
Q ss_pred eeEecCCCCceeeeEEEeC
Q 004690 369 TVLIPHRESVKLQDIQLFI 387 (736)
Q Consensus 369 ~~l~~~~~~~~i~~~~~~~ 387 (736)
..+--+.++..+..+.|..
T Consensus 394 ~~V~vP~~GF~i~~l~W~~ 412 (447)
T KOG4497|consen 394 RVVGVPKKGFNIQKLQWLQ 412 (447)
T ss_pred eEEecCCCCceeeeEEecC
Confidence 2233344557788887754
No 298
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.85 E-value=1.9 Score=44.16 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=69.7
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCc--cceeEEeeCCeEEEEEeCCCCCC-ceEEEEEcC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGV--TASVEWAGNEALVYITMDEILRP-DKAWLHKLE 269 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~--~~~~~WspDg~l~y~~~~~~~~~-~~v~~~~l~ 269 (736)
++..+|+...+++...+.| ..+.++|..+|+.... ..++. ++.-.||+||+++|++..+-... -.|-+++..
T Consensus 9 ~~a~~p~~~~avafaRRPG---~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRPG---TFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred ceeeCCCCCeEEEEEeCCC---cEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 4678995444444445566 4688999999997753 22332 56789999998778876543222 234556665
Q ss_pred CCCCCcEEEEeecCCce-EEEEEEcCCccEEEEEecC------cc---------eeEEEEEeCCCCC
Q 004690 270 ADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASES------KI---------TRFVFYLDVSKPE 320 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~-~~~~~~S~Dg~~l~~~~~~------~~---------~~~l~~~dl~~~~ 320 (736)
.+ -..+-+-..... -..+.+.|||+.|++.-.. .+ ...|-++|..+|+
T Consensus 86 ~~---~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ 149 (305)
T PF07433_consen 86 RG---YRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGA 149 (305)
T ss_pred CC---cEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCc
Confidence 22 112221111000 0135689999988875421 01 1347778877776
No 299
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.80 E-value=0.077 Score=53.47 Aligned_cols=46 Identities=15% Similarity=0.120 Sum_probs=38.5
Q ss_pred cccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCC
Q 004690 655 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 703 (736)
Q Consensus 655 ~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 703 (736)
..|-|.+.+.+|..|++.+.+++++..++.|.++....+. +.+|..
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~---~S~HV~ 223 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFE---DSPHVA 223 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCC---CCchhh
Confidence 3569999999999999999999999999999887666665 666654
No 300
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.78 E-value=2.6 Score=51.89 Aligned_cols=196 Identities=17% Similarity=0.175 Sum_probs=103.0
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc--------c----------CccceeEEeeCCeEEEEEe
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--------V----------GVTASVEWAGNEALVYITM 254 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~--------~----------~~~~~~~WspDg~l~y~~~ 254 (736)
-.++.++++|+.| |..+..+ ..|+++|+.++....... . +.-..++++|++..+|++.
T Consensus 626 P~GIavd~~gn~L-YVaDt~n---~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad 701 (1057)
T PLN02919 626 PQGLAYNAKKNLL-YVADTEN---HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM 701 (1057)
T ss_pred CcEEEEeCCCCEE-EEEeCCC---ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE
Confidence 3567788888765 4455433 468888988776543210 0 0112478999764444444
Q ss_pred CCCCCCceEEEEEcCCCCCCcEEEEeec------C------Cc--eEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 255 DEILRPDKAWLHKLEADQSNDICLYHEK------D------DI--YSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 255 ~~~~~~~~v~~~~l~t~~~~~~~~~~~~------~------~~--~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
.. .++|+.++..++. ...+... + .. .-.+++++|||++|++... .++.|+++|++++.
T Consensus 702 ~~---~~~I~v~d~~~g~---v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs--~n~~Irv~D~~tg~ 773 (1057)
T PLN02919 702 AG---QHQIWEYNISDGV---TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS--ESSSIRALDLKTGG 773 (1057)
T ss_pred CC---CCeEEEEECCCCe---EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC--CCCeEEEEECCCCc
Confidence 22 2457777765541 1222110 0 00 1124788999999887543 34578889988765
Q ss_pred ceEEeeccc-------------cc----------eeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCC-
Q 004690 321 ELRVLTPRV-------------VG----------VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE- 376 (736)
Q Consensus 321 ~~~~l~~~~-------------~~----------~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~- 376 (736)
...+.... ++ ....++++|+ +|+. +.. +.+|.+++.++. ....+...+.
T Consensus 774 -~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVA-Ds~---N~rIrviD~~tg-~v~tiaG~G~~ 846 (1057)
T PLN02919 774 -SRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVA-DSY---NHKIKKLDPATK-RVTTLAGTGKA 846 (1057)
T ss_pred -EEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEE-ECC---CCEEEEEECCCC-eEEEEeccCCc
Confidence 33222100 00 0123667775 5444 332 567888887652 2222221110
Q ss_pred -----------CceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCC
Q 004690 377 -----------SVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 377 -----------~~~i~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~ 409 (736)
-....++.++.+ .+++.. .+...|+++++..
T Consensus 847 G~~dG~~~~a~l~~P~GIavd~dG~lyVaD--t~Nn~Irvid~~~ 889 (1057)
T PLN02919 847 GFKDGKALKAQLSEPAGLALGENGRLFVAD--TNNSLIRYLDLNK 889 (1057)
T ss_pred CCCCCcccccccCCceEEEEeCCCCEEEEE--CCCCEEEEEECCC
Confidence 012445666554 444443 3334688888863
No 301
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=95.71 E-value=0.13 Score=51.65 Aligned_cols=142 Identities=17% Similarity=0.143 Sum_probs=74.9
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEEC---CCCCeec----ccccCc---cceeEEeeCC-eEEEEEeCCCCCCce
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDI---ETGTPVG----KPLVGV---TASVEWAGNE-ALVYITMDEILRPDK 262 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl---~tg~~~~----~~~~~~---~~~~~WspDg-~l~y~~~~~~~~~~~ 262 (736)
...++||||++||..--. .++.||.+ ..|+... ..+.+. ...++|||++ +++-++.|..+ +
T Consensus 232 ~~aavSP~GRFia~~gFT-----pDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~w---r 303 (420)
T KOG2096|consen 232 YDAAVSPDGRFIAVSGFT-----PDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKW---R 303 (420)
T ss_pred cceeeCCCCcEEEEecCC-----CCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcE---E
Confidence 356899999999865432 23455543 3444332 133433 3457899999 77777766654 3
Q ss_pred EEEEEcCCCCCCcEEEEeec-C-----CceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeec-cccce-eE
Q 004690 263 AWLHKLEADQSNDICLYHEK-D-----DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGV-DT 334 (736)
Q Consensus 263 v~~~~l~t~~~~~~~~~~~~-~-----~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~-~~ 334 (736)
||-.++.-...+|..++.+. . ..--+.++.||.|+.|+++.. +.|-++..++|+....+.. ....+ ..
T Consensus 304 iwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g----s~l~~~~se~g~~~~~~e~~h~~~Is~i 379 (420)
T KOG2096|consen 304 IWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG----SDLKVFASEDGKDYPELEDIHSTTISSI 379 (420)
T ss_pred EeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC----CceEEEEcccCccchhHHHhhcCceeeE
Confidence 55333221111222222111 1 111235778999999988653 3456666666651111111 11112 23
Q ss_pred EEeeeCCEEEEEE
Q 004690 335 AASHRGNHFFITR 347 (736)
Q Consensus 335 ~~s~dg~~l~~~t 347 (736)
.|+++|++++-..
T Consensus 380 s~~~~g~~~atcG 392 (420)
T KOG2096|consen 380 SYSSDGKYIATCG 392 (420)
T ss_pred EecCCCcEEeeec
Confidence 5888888665443
No 302
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=95.70 E-value=0.031 Score=59.65 Aligned_cols=57 Identities=25% Similarity=0.415 Sum_probs=41.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCccceeEEeeCCeEEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYIT 253 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~~~~~~WspDg~l~y~~ 253 (736)
.+..+.+||||++||.+... | .|+|+|.++.+.+.. ..-+..-.++|||||+++.+.
T Consensus 292 ~in~f~FS~DG~~LA~VSqD-G----fLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQD-G----FLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTG 350 (636)
T ss_pred cccceeEcCCCceEEEEecC-c----eEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEec
Confidence 67889999999999987653 3 599999998776542 222223347999999655543
No 303
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.65 E-value=0.036 Score=57.15 Aligned_cols=111 Identities=18% Similarity=0.225 Sum_probs=68.0
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcE--EEEEcccCCCC-CChhhhhccccccCcChHHHHHHHHHHHHHcCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFI--FAIAQIRGGGE-LGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 591 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~--v~~~d~RG~g~-~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 591 (736)
..-++|++|| |+......-...++...+.|+- .+.+-.+-.|. .|..+. +..-..+-.++...+++|.+...
T Consensus 115 ~k~vlvFvHG-fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~D----reS~~~Sr~aLe~~lr~La~~~~ 189 (377)
T COG4782 115 AKTVLVFVHG-FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYD----RESTNYSRPALERLLRYLATDKP 189 (377)
T ss_pred CCeEEEEEcc-cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccc----hhhhhhhHHHHHHHHHHHHhCCC
Confidence 3468999999 5544332222334444455543 33333333221 122111 12223455788999999998765
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHh----C----CCceeEEEEcCCccch
Q 004690 592 CTKEKLCIEGRSAGGLLIGAVLNM----R----PDLFKAAVAAVPFVDV 632 (736)
Q Consensus 592 ~d~~ri~~~G~S~GG~la~~~~~~----~----p~~~~a~v~~~p~~d~ 632 (736)
. .+|.|++||||..+++.++.+ . +..++-+|+.+|=.|.
T Consensus 190 ~--~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 190 V--KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred C--ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 4 789999999999999876643 2 2357889999997664
No 304
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=95.62 E-value=0.61 Score=52.76 Aligned_cols=148 Identities=11% Similarity=0.152 Sum_probs=73.3
Q ss_pred eEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcC-CccEEEEEecCcceeEEEEEeCCCC
Q 004690 241 VEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKP 319 (736)
Q Consensus 241 ~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~-Dg~~l~~~~~~~~~~~l~~~dl~~~ 319 (736)
++||.++.|+=.+.|.+ |.+|+++.. +-..+|... .|...++|.| |.+|+ ++..-...-+||-| .+.
T Consensus 375 lSWSKn~fLLSSSMDKT-----VRLWh~~~~--~CL~~F~Hn--dfVTcVaFnPvDDryF-iSGSLD~KvRiWsI--~d~ 442 (712)
T KOG0283|consen 375 LSWSKNNFLLSSSMDKT-----VRLWHPGRK--ECLKVFSHN--DFVTCVAFNPVDDRYF-ISGSLDGKVRLWSI--SDK 442 (712)
T ss_pred cccccCCeeEecccccc-----EEeecCCCc--ceeeEEecC--CeeEEEEecccCCCcE-eecccccceEEeec--CcC
Confidence 68988876665555553 667778765 455677554 5777788888 55553 33322333344543 332
Q ss_pred CceEEeeccccce-e-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCC-----CCceeeeEEEeCCE--E
Q 004690 320 EELRVLTPRVVGV-D-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-----ESVKLQDIQLFIDH--L 390 (736)
Q Consensus 320 ~~~~~l~~~~~~~-~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~-----~~~~i~~~~~~~~~--l 390 (736)
+ + .......+. . .-+.|||+..++-+-.+ ..++|-+.-... ...+-|... ....|.++..+... -
T Consensus 443 ~-V-v~W~Dl~~lITAvcy~PdGk~avIGt~~G---~C~fY~t~~lk~-~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~ 516 (712)
T KOG0283|consen 443 K-V-VDWNDLRDLITAVCYSPDGKGAVIGTFNG---YCRFYDTEGLKL-VSDFHIRLHNKKKKQGKRITGLQFFPGDPDE 516 (712)
T ss_pred e-e-EeehhhhhhheeEEeccCCceEEEEEecc---EEEEEEccCCeE-EEeeeEeeccCccccCceeeeeEecCCCCCe
Confidence 2 1 111111121 1 22678888766666543 334443321110 011111110 11156677765421 2
Q ss_pred EEEEEeCCeeEEEEEEcC
Q 004690 391 AVYEREGGLQKITTYRLP 408 (736)
Q Consensus 391 ~~~~~~~g~~~l~v~~l~ 408 (736)
+++...+ ++|+||++.
T Consensus 517 vLVTSnD--SrIRI~d~~ 532 (712)
T KOG0283|consen 517 VLVTSND--SRIRIYDGR 532 (712)
T ss_pred EEEecCC--CceEEEecc
Confidence 4444444 468888874
No 305
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=95.60 E-value=0.019 Score=61.03 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=75.5
Q ss_pred EeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCch-hHHHHHHC-CcEEEEEcccCCCCCChhhhhccccccCcChH
Q 004690 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 576 (736)
Q Consensus 499 i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 576 (736)
+.+-+..|. . ++ .+.-++|++|||.-.+..++... ....|+.. ..+|+.+|||-+. +|--+........+...+
T Consensus 121 LYlNVW~P~-~-~p-~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL~l~~~~eaPGNmGl 196 (601)
T KOG4389|consen 121 LYLNVWAPA-A-DP-YNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFLYLPGHPEAPGNMGL 196 (601)
T ss_pred eEEEEeccC-C-CC-CCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeecc-ceEEecCCCCCCCCccch
Confidence 444455563 1 22 22338999999743333333221 12345544 5778889999532 332111111122333456
Q ss_pred HHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEcCCccc
Q 004690 577 TDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFVD 631 (736)
Q Consensus 577 ~D~~~~~~~l~~~---~~~d~~ri~~~G~S~GG~la~~~~~~~p---~~~~a~v~~~p~~d 631 (736)
-|-.=|++|+.++ -.-||++|.+.|.|+|+.-+.+-+.. | .+|+-+|+.+|-.+
T Consensus 197 ~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLls-P~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 197 LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLS-PGSRGLFHRAILQSGSLN 256 (601)
T ss_pred HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecC-CCchhhHHHHHhhcCCCC
Confidence 7888999999876 23589999999999998755443332 3 37888888887554
No 306
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=95.57 E-value=0.058 Score=53.82 Aligned_cols=98 Identities=18% Similarity=0.310 Sum_probs=59.7
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc----cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK----PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~----~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~ 267 (736)
+-.+.||-|...+|- |+..-.|.||.+.+|.-++. ...+ ...+.||.|+ +++-.+.|. .+..|-
T Consensus 266 Vlci~FSRDsEMlAs-----GsqDGkIKvWri~tG~ClRrFdrAHtkG-vt~l~FSrD~SqiLS~sfD~-----tvRiHG 334 (508)
T KOG0275|consen 266 VLCISFSRDSEMLAS-----GSQDGKIKVWRIETGQCLRRFDRAHTKG-VTCLSFSRDNSQILSASFDQ-----TVRIHG 334 (508)
T ss_pred eEEEeecccHHHhhc-----cCcCCcEEEEEEecchHHHHhhhhhccC-eeEEEEccCcchhhcccccc-----eEEEec
Confidence 445567888777774 44345699999999985541 1122 3458999999 676655543 466777
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEec
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASE 304 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~ 304 (736)
+.++ +-..-|.+ ...|.-...+++||.+|+-.++
T Consensus 335 lKSG--K~LKEfrG-HsSyvn~a~ft~dG~~iisaSs 368 (508)
T KOG0275|consen 335 LKSG--KCLKEFRG-HSSYVNEATFTDDGHHIISASS 368 (508)
T ss_pred cccc--hhHHHhcC-ccccccceEEcCCCCeEEEecC
Confidence 7665 21112221 2334445678999988764443
No 307
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=95.57 E-value=0.1 Score=57.43 Aligned_cols=119 Identities=18% Similarity=0.235 Sum_probs=73.1
Q ss_pred CCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeCC-eEEEEEeCCCCCCce
Q 004690 187 GRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDK 262 (736)
Q Consensus 187 ~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~ 262 (736)
||| +.+.....||+|+.||-....+--+...|++|+..+=.... .+.+ ....++||||| .|+-++.|+ ...
T Consensus 523 GHG-yEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~-~L~~HsLTVT~l~FSpdg~~LLsvsRDR---t~s 597 (764)
T KOG1063|consen 523 GHG-YEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQ-ELEGHSLTVTRLAFSPDGRYLLSVSRDR---TVS 597 (764)
T ss_pred cCc-eeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhh-eecccceEEEEEEECCCCcEEEEeecCc---eEE
Confidence 444 57889999999999998877666778889999887643333 2222 25569999999 455554443 233
Q ss_pred EEEEEcCCCCCCcEEEEe--ecCCceEEEEEEcCCccEEEEEecCcceeEEEEE
Q 004690 263 AWLHKLEADQSNDICLYH--EKDDIYSLGLQASESKKFLFIASESKITRFVFYL 314 (736)
Q Consensus 263 v~~~~l~t~~~~~~~~~~--~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~ 314 (736)
|| ....+.. +..-|. ....+...+.+|+||+++ ++++++...-.+|..
T Consensus 598 l~--~~~~~~~-~e~~fa~~k~HtRIIWdcsW~pde~~-FaTaSRDK~VkVW~~ 647 (764)
T KOG1063|consen 598 LY--EVQEDIK-DEFRFACLKAHTRIIWDCSWSPDEKY-FATASRDKKVKVWEE 647 (764)
T ss_pred ee--eeecccc-hhhhhccccccceEEEEcccCcccce-eEEecCCceEEEEec
Confidence 44 3333211 111121 223456678899999999 444444433344544
No 308
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=95.55 E-value=0.87 Score=47.22 Aligned_cols=113 Identities=14% Similarity=0.155 Sum_probs=75.0
Q ss_pred EEeeEEECCCCC-EEEEEEeCCCCcEEEEEEEECCCCCe-ecc-----cccC---ccceeEEeeCC-eEEEEEeCCCCCC
Q 004690 192 SVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTP-VGK-----PLVG---VTASVEWAGNE-ALVYITMDEILRP 260 (736)
Q Consensus 192 ~~~~~~~SPDG~-~la~~~~~~G~e~~~l~v~dl~tg~~-~~~-----~~~~---~~~~~~WspDg-~l~y~~~~~~~~~ 260 (736)
.+=...|+|-.. .|| +|+|.+.|.||.+-.+-. +.+ .+.+ ..+-+.|.|-- .++.++. ..
T Consensus 83 ~vLDi~w~PfnD~vIA-----SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag----~D 153 (472)
T KOG0303|consen 83 PVLDIDWCPFNDCVIA-----SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAG----SD 153 (472)
T ss_pred cccccccCccCCceee-----cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhcc----CC
Confidence 344568888444 444 588889999998754332 221 1222 25668999887 5666543 23
Q ss_pred ceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 261 ~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
+.|..++++|+ +..+-.. .+....+.+|+-||..|.-++.+ ..|.++|..+++
T Consensus 154 n~v~iWnv~tg--eali~l~--hpd~i~S~sfn~dGs~l~TtckD---KkvRv~dpr~~~ 206 (472)
T KOG0303|consen 154 NTVSIWNVGTG--EALITLD--HPDMVYSMSFNRDGSLLCTTCKD---KKVRVIDPRRGT 206 (472)
T ss_pred ceEEEEeccCC--ceeeecC--CCCeEEEEEeccCCceeeeeccc---ceeEEEcCCCCc
Confidence 56899999998 3333333 56677789999999988755443 457888888776
No 309
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=95.53 E-value=0.077 Score=54.03 Aligned_cols=158 Identities=13% Similarity=0.124 Sum_probs=93.1
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEE
Q 004690 189 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 189 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~ 267 (736)
|+-++..++++|-..-|.-+... ...|.++|+.++.++.. .+.-....++|+| ..+-|++.+ +.+.+|.++
T Consensus 186 G~Dti~svkfNpvETsILas~~s----DrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP-eafnF~~a~---ED~nlY~~D 257 (433)
T KOG0268|consen 186 GADSISSVKFNPVETSILASCAS----DRSIVLYDLRQASPLKKVILTMRTNTICWNP-EAFNFVAAN---EDHNLYTYD 257 (433)
T ss_pred CCCceeEEecCCCcchheeeecc----CCceEEEecccCCccceeeeeccccceecCc-cccceeecc---ccccceehh
Confidence 44567788888887776544322 23599999999988764 3444456799999 545555543 345688888
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccceeEE-EeeeCCEEEE
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTA-ASHRGNHFFI 345 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~~~-~s~dg~~l~~ 345 (736)
+.--. .+.-++.+. ..-.+++.+||-|+-++-.+-+. .|.+.+...+. .-..-+++...+... ||.|.++++-
T Consensus 258 mR~l~-~p~~v~~dh-vsAV~dVdfsptG~EfvsgsyDk---sIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~S 332 (433)
T KOG0268|consen 258 MRNLS-RPLNVHKDH-VSAVMDVDFSPTGQEFVSGSYDK---SIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIIS 332 (433)
T ss_pred hhhhc-ccchhhccc-ceeEEEeccCCCcchhccccccc---eEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEe
Confidence 75432 234444332 23356788999999865433222 24444544443 111123344444433 8888775443
Q ss_pred EEcCCCCCCcEEEEEeC
Q 004690 346 TRRSDELFNSELLACPV 362 (736)
Q Consensus 346 ~t~~~~~~~~~l~~~~~ 362 (736)
-+++ .|.+|++...
T Consensus 333 GSdd---~nvRlWka~A 346 (433)
T KOG0268|consen 333 GSDD---GNVRLWKAKA 346 (433)
T ss_pred cCCC---cceeeeecch
Confidence 3332 3788888764
No 310
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=95.53 E-value=3.2 Score=41.98 Aligned_cols=243 Identities=12% Similarity=0.061 Sum_probs=123.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccC-ccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~-~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
.+..+.+|+||.+++-..+ .-.|.++|..+|..+.. .... ...-+.|.... .+++.+.. ....|.+.++
T Consensus 16 ~i~sl~fs~~G~~litss~-----dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk---~d~tIryLsl 87 (311)
T KOG1446|consen 16 KINSLDFSDDGLLLITSSE-----DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTK---EDDTIRYLSL 87 (311)
T ss_pred ceeEEEecCCCCEEEEecC-----CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCC---CCCceEEEEe
Confidence 4677899999999986433 23699999999987653 2221 12336777666 77777652 2345777788
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEEEc
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRR 348 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~ 348 (736)
-+. +=+..|.+. .....++..+|-+.. +++++... .|++.|+...+ .+-+..-.......++|.|-.+++..+
T Consensus 88 ~dN--kylRYF~GH-~~~V~sL~~sP~~d~-FlS~S~D~--tvrLWDlR~~~-cqg~l~~~~~pi~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 88 HDN--KYLRYFPGH-KKRVNSLSVSPKDDT-FLSSSLDK--TVRLWDLRVKK-CQGLLNLSGRPIAAFDPEGLIFALANG 160 (311)
T ss_pred ecC--ceEEEcCCC-CceEEEEEecCCCCe-EEecccCC--eEEeeEecCCC-CceEEecCCCcceeECCCCcEEEEecC
Confidence 765 344455443 344557788887743 44443333 35566666544 211211111123457887754444433
Q ss_pred CCCCCCcEEEEEeCCC--CCceee-EecCCCCceeeeEE--EeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCcee
Q 004690 349 SDELFNSELLACPVDN--TSETTV-LIPHRESVKLQDIQ--LFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 423 (736)
Q Consensus 349 ~~~~~~~~l~~~~~~~--~~~~~~-l~~~~~~~~i~~~~--~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i 423 (736)
.+ .|-..|+.. .+.... .+..........+. .+++.+++....+ .+++++.-. |... ...
T Consensus 161 ~~-----~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s---~~~~lDAf~-G~~~------~tf 225 (311)
T KOG1446|consen 161 SE-----LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNAS---FIYLLDAFD-GTVK------STF 225 (311)
T ss_pred CC-----eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCC---cEEEEEccC-CcEe------eeE
Confidence 22 344444432 223332 33322233344444 4445555544332 355555432 3211 111
Q ss_pred eecCccccc-CCCCcccCcceEEEEeccCCCCcEEEEEECCCCcEE
Q 004690 424 EFIDPVYSI-DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (736)
Q Consensus 424 ~~p~~~~~v-~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~ 468 (736)
........+ .....++|+. ++++.++ -++++.|++++++..
T Consensus 226 s~~~~~~~~~~~a~ftPds~-Fvl~gs~---dg~i~vw~~~tg~~v 267 (311)
T KOG1446|consen 226 SGYPNAGNLPLSATFTPDSK-FVLSGSD---DGTIHVWNLETGKKV 267 (311)
T ss_pred eeccCCCCcceeEEECCCCc-EEEEecC---CCcEEEEEcCCCcEe
Confidence 111111111 1223455654 3344332 356888998888743
No 311
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=95.50 E-value=0.069 Score=58.04 Aligned_cols=112 Identities=12% Similarity=0.153 Sum_probs=67.2
Q ss_pred EEeeEEECCCCC-EEEEEEeCCCCcEEEEEEEECCCCCeecc---cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 192 SVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 192 ~~~~~~~SPDG~-~la~~~~~~G~e~~~l~v~dl~tg~~~~~---~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
.|...+|.|=-. .||..+ -..+|.+||+.+++.... ..+.++ +++||||| .++-+..|. .|+.|
T Consensus 679 KI~slRfHPLAadvLa~as-----yd~Ti~lWDl~~~~~~~~l~gHtdqIf-~~AWSpdGr~~AtVcKDg-----~~rVy 747 (1012)
T KOG1445|consen 679 KITSLRFHPLAADVLAVAS-----YDSTIELWDLANAKLYSRLVGHTDQIF-GIAWSPDGRRIATVCKDG-----TLRVY 747 (1012)
T ss_pred eEEEEEecchhhhHhhhhh-----ccceeeeeehhhhhhhheeccCcCcee-EEEECCCCcceeeeecCc-----eEEEe
Confidence 456667777332 222222 247899999998876431 223334 49999999 677766654 36666
Q ss_pred EcCCCCCCcEEEEeecCC--ceEEEEEEcCCccEEEEEecCcc-eeEEEEEeCC
Q 004690 267 KLEADQSNDICLYHEKDD--IYSLGLQASESKKFLFIASESKI-TRFVFYLDVS 317 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~--~~~~~~~~S~Dg~~l~~~~~~~~-~~~l~~~dl~ 317 (736)
+-.+. ...+++++.+ .....+.|.=||++|++..-++. ...|-++|..
T Consensus 748 ~Prs~---e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq 798 (1012)
T KOG1445|consen 748 EPRSR---EQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQ 798 (1012)
T ss_pred CCCCC---CCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhh
Confidence 65443 4456665432 22345778999999988764432 2344444543
No 312
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=95.46 E-value=1.4 Score=42.59 Aligned_cols=158 Identities=15% Similarity=0.085 Sum_probs=80.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccC-ccceeEEeeCCeEEEEEe-CCC----------CC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG-VTASVEWAGNEALVYITM-DEI----------LR 259 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~-~~~~~~WspDg~l~y~~~-~~~----------~~ 259 (736)
+-....|-|...+| .-+| ...+++||++||+..+. .... -...+.|..+.++++... |.. .+
T Consensus 62 VlD~~~s~Dnskf~---s~Gg--Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~e 136 (307)
T KOG0316|consen 62 VLDAALSSDNSKFA---SCGG--DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFE 136 (307)
T ss_pred eeeccccccccccc---cCCC--CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCC
Confidence 33446677887776 2223 57899999999997652 2111 244577766656655532 211 11
Q ss_pred CceE--------EEEEcC-----CCC-CCcEEEEeecCCc--------eEEEEEEcCCccEEEEEecCcceeEEEEEeCC
Q 004690 260 PDKA--------WLHKLE-----ADQ-SNDICLYHEKDDI--------YSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (736)
Q Consensus 260 ~~~v--------~~~~l~-----t~~-~~~~~~~~~~~~~--------~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~ 317 (736)
|-|+ .-.++. ++. ......|.-.... -...+.+|+||+..++.+-+ +.|.++|-+
T Consensus 137 PiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~---stlrLlDk~ 213 (307)
T KOG0316|consen 137 PIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLD---STLRLLDKE 213 (307)
T ss_pred ccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeecc---ceeeecccc
Confidence 1111 111111 000 0011222111110 11246789999988876643 347888888
Q ss_pred CCCceEEeeccccceeEE----EeeeCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004690 318 KPEELRVLTPRVVGVDTA----ASHRGNHFFITRRSDELFNSELLACPVDN 364 (736)
Q Consensus 318 ~~~~~~~l~~~~~~~~~~----~s~dg~~l~~~t~~~~~~~~~l~~~~~~~ 364 (736)
+|+ +....++..+.+|- +.. .+..+|...++ +.+|..|+..
T Consensus 214 tGk-lL~sYkGhkn~eykldc~l~q-sdthV~sgSED----G~Vy~wdLvd 258 (307)
T KOG0316|consen 214 TGK-LLKSYKGHKNMEYKLDCCLNQ-SDTHVFSGSED----GKVYFWDLVD 258 (307)
T ss_pred hhH-HHHHhcccccceeeeeeeecc-cceeEEeccCC----ceEEEEEecc
Confidence 887 33333333344443 322 33445554444 5788888754
No 313
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=95.43 E-value=0.14 Score=54.05 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=49.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
.+....||++|+.+.-.. -...|.+||++||+.+.- ........+.+.||+ .++++..-+ .+|..+++.
T Consensus 260 ~Vrd~~~s~~g~~fLS~s-----fD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd----~ki~~wDiR 330 (503)
T KOG0282|consen 260 PVRDASFNNCGTSFLSAS-----FDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSD----KKIRQWDIR 330 (503)
T ss_pred hhhhhhccccCCeeeeee-----cceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCC----CcEEEEecc
Confidence 477889999999876332 246799999999998753 333345568899999 777665432 246666666
Q ss_pred CC
Q 004690 270 AD 271 (736)
Q Consensus 270 t~ 271 (736)
++
T Consensus 331 s~ 332 (503)
T KOG0282|consen 331 SG 332 (503)
T ss_pred ch
Confidence 54
No 314
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=95.43 E-value=2.2 Score=49.11 Aligned_cols=99 Identities=15% Similarity=0.100 Sum_probs=56.1
Q ss_pred eEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCC
Q 004690 241 VEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (736)
Q Consensus 241 ~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~ 319 (736)
++++.+| .++..+.| ..|.+.++... ..+.++...+. -...+.++|.|++|++.+-+ ..|+++++.++
T Consensus 102 ~~v~g~g~~iaagsdD-----~~vK~~~~~D~--s~~~~lrgh~a-pVl~l~~~p~~~fLAvss~d---G~v~iw~~~~~ 170 (933)
T KOG1274|consen 102 LAVSGSGKMIAAGSDD-----TAVKLLNLDDS--SQEKVLRGHDA-PVLQLSYDPKGNFLAVSSCD---GKVQIWDLQDG 170 (933)
T ss_pred EEEecCCcEEEeecCc-----eeEEEEecccc--chheeecccCC-ceeeeeEcCCCCEEEEEecC---ceEEEEEcccc
Confidence 4555555 34433322 23445554443 23344444332 23467889999999887644 34788888877
Q ss_pred C---ceEEeeccccce------eEEEeeeCCEEEEEEcCC
Q 004690 320 E---ELRVLTPRVVGV------DTAASHRGNHFFITRRSD 350 (736)
Q Consensus 320 ~---~~~~l~~~~~~~------~~~~s~dg~~l~~~t~~~ 350 (736)
. .+..+.+..+.. ...|+|+|++|++..-++
T Consensus 171 ~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~ 210 (933)
T KOG1274|consen 171 ILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDN 210 (933)
T ss_pred hhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCC
Confidence 5 223333332221 245999998888876654
No 315
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.42 E-value=0.025 Score=48.49 Aligned_cols=60 Identities=28% Similarity=0.434 Sum_probs=43.3
Q ss_pred cccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHH
Q 004690 655 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 723 (736)
Q Consensus 655 ~ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~ 723 (736)
.+|+|++.++.|+.+|+..++++.++|.. .+++... +.||+.......-..+. +.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~---g~gHg~~~~~s~C~~~~--v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVD---GAGHGVYAGGSPCVDKA--VDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEe---ccCcceecCCChHHHHH--HHHHHHc
Confidence 47899999999999999999999988764 2456665 88998753333333332 5567763
No 316
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.41 E-value=0.36 Score=50.30 Aligned_cols=157 Identities=13% Similarity=0.083 Sum_probs=80.7
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-c-c--cCccceeEEeeCC-e-EEEEEe-CCCCCCceE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-L--VGVTASVEWAGNE-A-LVYITM-DEILRPDKA 263 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~-~--~~~~~~~~WspDg-~-l~y~~~-~~~~~~~~v 263 (736)
..+....|||||+.||+.... ...||++++|..+.. + . +..+....|+.|+ + .+|+.. ..... .|
T Consensus 187 ~eV~DL~FS~dgk~lasig~d------~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~--~v 258 (398)
T KOG0771|consen 187 AEVKDLDFSPDGKFLASIGAD------SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGG--GV 258 (398)
T ss_pred CccccceeCCCCcEEEEecCC------ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCC--ce
Confidence 468889999999999987542 589999999965532 2 1 2235667899887 2 333322 11111 12
Q ss_pred EEEEcCCCCCCcEEEEeec--CCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce---eEEEee
Q 004690 264 WLHKLEADQSNDICLYHEK--DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV---DTAASH 338 (736)
Q Consensus 264 ~~~~l~t~~~~~~~~~~~~--~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~---~~~~s~ 338 (736)
...++..-.....+..... ...-..+.+.|+||+++++.+.+. .|-+++..+-+ ...+.++.-.. ...|+|
T Consensus 259 ~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dG---sVai~~~~~lq-~~~~vk~aH~~~VT~ltF~P 334 (398)
T KOG0771|consen 259 RLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDG---SVAIYDAKSLQ-RLQYVKEAHLGFVTGLTFSP 334 (398)
T ss_pred eEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCC---cEEEEEeceee-eeEeehhhheeeeeeEEEcC
Confidence 2222221100111111111 011123567899999999987643 35566655433 22233332221 123777
Q ss_pred eCCEEEEEEcCCCCCCcEEEEEeC
Q 004690 339 RGNHFFITRRSDELFNSELLACPV 362 (736)
Q Consensus 339 dg~~l~~~t~~~~~~~~~l~~~~~ 362 (736)
|.+.+.=++... ...|..+..
T Consensus 335 dsr~~~svSs~~---~~~v~~l~v 355 (398)
T KOG0771|consen 335 DSRYLASVSSDN---EAAVTKLAV 355 (398)
T ss_pred CcCcccccccCC---ceeEEEEee
Confidence 766555433322 234555444
No 317
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=95.34 E-value=2.5 Score=44.93 Aligned_cols=195 Identities=15% Similarity=0.145 Sum_probs=102.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCcc-ceeEEeeCCeEEEEEeCCCCCCceEEEEEcC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVT-ASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~-~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
.+-+.+|+-+|.+|+-+ +-..++.+||..+|+..+. ++.... -.+.|-.+..|+-...+. .+++..++
T Consensus 278 PI~slKWnk~G~yilS~-----~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~-----~i~V~kv~ 347 (524)
T KOG0273|consen 278 PIFSLKWNKKGTYILSG-----GVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDG-----CIHVCKVG 347 (524)
T ss_pred ceEEEEEcCCCCEEEec-----cCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCc-----eEEEEEec
Confidence 46778999999999833 2235788999999987653 443332 348897776665443322 36666676
Q ss_pred CCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCE------
Q 004690 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNH------ 342 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~------ 342 (736)
.. .++.-+.+.+.. ...+.|.|-|+.| .++++.++-.||-+.-+.- ...+......+. ..|+|+|.-
T Consensus 348 ~~--~P~~t~~GH~g~-V~alk~n~tg~LL-aS~SdD~TlkiWs~~~~~~--~~~l~~Hskei~t~~wsp~g~v~~n~~~ 421 (524)
T KOG0273|consen 348 ED--RPVKTFIGHHGE-VNALKWNPTGSLL-ASCSDDGTLKIWSMGQSNS--VHDLQAHSKEIYTIKWSPTGPVTSNPNM 421 (524)
T ss_pred CC--CcceeeecccCc-eEEEEECCCCceE-EEecCCCeeEeeecCCCcc--hhhhhhhccceeeEeecCCCCccCCCcC
Confidence 55 344444443322 2356788988754 4555556667776533221 222222221211 237776541
Q ss_pred -EEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 343 -FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 343 -l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
+.+++.. .+.-|-..|+..+.....+..+++.+.-..+++++.+++ +...++. +.+++..
T Consensus 422 ~~~l~sas---~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylA-sGs~dg~--V~iws~~ 482 (524)
T KOG0273|consen 422 NLMLASAS---FDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLA-SGSLDGC--VHIWSTK 482 (524)
T ss_pred CceEEEee---cCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEE-ecCCCCe--eEecccc
Confidence 1111111 122344445544322223456666655445555555444 3333443 6666655
No 318
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.28 E-value=0.51 Score=49.22 Aligned_cols=177 Identities=12% Similarity=0.062 Sum_probs=90.6
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc--cCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
..+++++||+.||- |.+.-.++||+..+-....... ......+.||||| .|+++..+ . ..||- +.+
T Consensus 148 k~vaf~~~gs~lat-----gg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~---~~VW~--~~~ 216 (398)
T KOG0771|consen 148 KVVAFNGDGSKLAT-----GGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-S---ARVWS--VNT 216 (398)
T ss_pred eEEEEcCCCCEeee-----ccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-c---eEEEE--ecc
Confidence 56799999999984 3345679999955444332211 2223458999999 78888765 2 24554 433
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCc--cEEEEEe--cCcceeEEEEEeCCCCC---ceEEeecccccee-EEEeeeCCE
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESK--KFLFIAS--ESKITRFVFYLDVSKPE---ELRVLTPRVVGVD-TAASHRGNH 342 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg--~~l~~~~--~~~~~~~l~~~dl~~~~---~~~~l~~~~~~~~-~~~s~dg~~ 342 (736)
+..-...--.+.+ ..+..+.++.|+ ..+.+.. ...+.-.++.+-+-.+. ..+....+...+. ..++.+|+.
T Consensus 217 g~~~a~~t~~~k~-~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf 295 (398)
T KOG0771|consen 217 GAALARKTPFSKD-EMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKF 295 (398)
T ss_pred CchhhhcCCcccc-hhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcE
Confidence 3110000001122 223345666666 2222222 22232233333332221 2333444444444 459999998
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCC
Q 004690 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 388 (736)
Q Consensus 343 l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 388 (736)
+++.++.+ .+..++.... ....++++-....+.++.+..+
T Consensus 296 ~AlGT~dG-----sVai~~~~~l-q~~~~vk~aH~~~VT~ltF~Pd 335 (398)
T KOG0771|consen 296 LALGTMDG-----SVAIYDAKSL-QRLQYVKEAHLGFVTGLTFSPD 335 (398)
T ss_pred EEEeccCC-----cEEEEEecee-eeeEeehhhheeeeeeEEEcCC
Confidence 88888853 3444444331 1122555544445666655554
No 319
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.28 E-value=0.11 Score=55.92 Aligned_cols=116 Identities=20% Similarity=0.128 Sum_probs=76.9
Q ss_pred CCcEEEEecCCCCcCCCCC--CchhHHHHHH-CCcEEEEEcccCCCCC---ChhhhhccccccCcChHHHHHHHHHHHHH
Q 004690 515 SDPLLLYGYGSYEICNDPA--FNSSRLSLLD-RGFIFAIAQIRGGGEL---GRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~--~~~~~~~l~~-~G~~v~~~d~RG~g~~---g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (736)
..|+.|++-|-.-....+. -......||+ .|..|+....|=.|.+ +..-...-+...-...+.|++..++.+..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 4588888865222221121 1223345555 4999999999976632 11001111233335678888888888876
Q ss_pred c-CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCcc
Q 004690 589 N-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (736)
Q Consensus 589 ~-~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~ 630 (736)
+ +..++.+.+..|+|+-|.|++++=..+|+++.++|+.++.+
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 6 35566699999999999999999999999988888776543
No 320
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=95.27 E-value=0.37 Score=51.53 Aligned_cols=143 Identities=11% Similarity=0.108 Sum_probs=83.0
Q ss_pred eEEECCCCCEEEEEEeCCC---Cc---EEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 195 CFQVSPDNKLVAYAEDTKG---DE---IYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G---~e---~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
.+.|-+.|++|++.+.+.- .. ..+||+.++.......+ ...+....++|.|++ ++..+.. -.+..+-.+
T Consensus 227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g---~~pa~~s~~ 303 (561)
T COG5354 227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISG---YMPASVSVF 303 (561)
T ss_pred EEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEec---ccccceeec
Confidence 3478999999998865431 11 25899999985444333 345556679999999 7776652 123345556
Q ss_pred EcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeec-cccceeE-EEeeeCCEEE
Q 004690 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDT-AASHRGNHFF 344 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~ 344 (736)
++.+. -+-.+.+.... .+.+||.++||++..-+.....+-+++..+. ..++.. ...+..+ .|+|||..++
T Consensus 304 ~lr~N---l~~~~Pe~~rN---T~~fsp~~r~il~agF~nl~gni~i~~~~~r--f~~~~~~~~~n~s~~~wspd~qF~~ 375 (561)
T COG5354 304 DLRGN---LRFYFPEQKRN---TIFFSPHERYILFAGFDNLQGNIEIFDPAGR--FKVAGAFNGLNTSYCDWSPDGQFYD 375 (561)
T ss_pred ccccc---eEEecCCcccc---cccccCcccEEEEecCCccccceEEeccCCc--eEEEEEeecCCceEeeccCCceEEE
Confidence 66543 11111121111 2457999999998664444444555666543 444421 2223344 5999988555
Q ss_pred EEEc
Q 004690 345 ITRR 348 (736)
Q Consensus 345 ~~t~ 348 (736)
..+.
T Consensus 376 ~~~t 379 (561)
T COG5354 376 TDTT 379 (561)
T ss_pred ecCC
Confidence 4443
No 321
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=95.24 E-value=0.32 Score=53.84 Aligned_cols=82 Identities=17% Similarity=0.250 Sum_probs=67.3
Q ss_pred CCCceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCc-cceeEEeeCC-eE
Q 004690 172 APPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-AL 249 (736)
Q Consensus 172 ~~~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~-~~~~~WspDg-~l 249 (736)
+.+++++||+|.+.+ ++...+..-++|-|+++++|.+...|+++..|..+..+.|......+... ++.++|.+|+ .+
T Consensus 106 ~~e~~~~ld~~~~~d-d~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~e~~~~v~~~~~~~~~~~~~~~g~ 184 (712)
T KOG2237|consen 106 EKEEEVFLDPNALGD-DGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGKELFTVVIDVKFSGPVWTHDGKGV 184 (712)
T ss_pred hcccceecCCccCCC-CceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCCccceeeeeeccCCceeeccCCce
Confidence 467899999999874 67888999999999999999999999999988888877777665444444 6779999998 67
Q ss_pred EEEEe
Q 004690 250 VYITM 254 (736)
Q Consensus 250 ~y~~~ 254 (736)
+|.+-
T Consensus 185 ~y~~w 189 (712)
T KOG2237|consen 185 SYLAW 189 (712)
T ss_pred Eeeee
Confidence 77654
No 322
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=95.21 E-value=0.67 Score=49.39 Aligned_cols=187 Identities=14% Similarity=0.149 Sum_probs=101.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cc----cCccceeEEeeCCeEEEEEeCCCCCCceEEEEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL----VGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~----~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~ 267 (736)
+..+.++|||+.|.. |+|..+|-||||++-..+-. .+ ..+.. ++-|||..+.|....+.+ |.+++
T Consensus 468 iRSckL~pdgrtLiv-----GGeastlsiWDLAapTprikaeltssapaCyA-La~spDakvcFsccsdGn----I~vwD 537 (705)
T KOG0639|consen 468 IRSCKLLPDGRTLIV-----GGEASTLSIWDLAAPTPRIKAELTSSAPACYA-LAISPDAKVCFSCCSDGN----IAVWD 537 (705)
T ss_pred eeeeEecCCCceEEe-----ccccceeeeeeccCCCcchhhhcCCcchhhhh-hhcCCccceeeeeccCCc----EEEEE
Confidence 678899999998874 55688999999997665422 22 22333 788999988888775442 66677
Q ss_pred cCCCCCCcEEEEee-cCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc-cceeE--EEeeeCCEE
Q 004690 268 LEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDT--AASHRGNHF 343 (736)
Q Consensus 268 l~t~~~~~~~~~~~-~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~--~~s~dg~~l 343 (736)
|-.. .-+.-|.+ .|..- .+..|+||..|.-.. -.+.|.-.|+..+. .+.... ....+ ...|.|+|+
T Consensus 538 Lhnq--~~VrqfqGhtDGas--cIdis~dGtklWTGG---lDntvRcWDlregr---qlqqhdF~SQIfSLg~cP~~dWl 607 (705)
T KOG0639|consen 538 LHNQ--TLVRQFQGHTDGAS--CIDISKDGTKLWTGG---LDNTVRCWDLREGR---QLQQHDFSSQIFSLGYCPTGDWL 607 (705)
T ss_pred cccc--eeeecccCCCCCce--eEEecCCCceeecCC---Cccceeehhhhhhh---hhhhhhhhhhheecccCCCccce
Confidence 7542 12223332 23322 355689998875322 12335556666543 222111 11112 256888887
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
++--. |..+.+....++. ...+.-++.-+....|+..+++.+-...+|- |-.|+.+
T Consensus 608 avGMe-----ns~vevlh~skp~-kyqlhlheScVLSlKFa~cGkwfvStGkDnl---LnawrtP 663 (705)
T KOG0639|consen 608 AVGME-----NSNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNL---LNAWRTP 663 (705)
T ss_pred eeecc-----cCcEEEEecCCcc-ceeecccccEEEEEEecccCceeeecCchhh---hhhccCc
Confidence 76533 3345555444422 1123323222222345666666654444443 3345444
No 323
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.14 E-value=0.095 Score=56.75 Aligned_cols=87 Identities=20% Similarity=0.140 Sum_probs=63.8
Q ss_pred CCcEEEEecCCC-CcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHc---
Q 004690 515 SDPLLLYGYGSY-EICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN--- 589 (736)
Q Consensus 515 ~~P~vl~~hGg~-~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--- 589 (736)
..-+|++.|||. -.....+.......|+.. |.-++.+||--..|. ..+...+.+.-|.-|++++
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEa-----------PFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEA-----------PFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCC-----------CCCcHHHHHHHHHHHHhcCHHH
Confidence 345899999974 344455566667777764 999999999755542 2345668899999999986
Q ss_pred -CCCCCCcEEEEEeChHHHHHHHHH
Q 004690 590 -CYCTKEKLCIEGRSAGGLLIGAVL 613 (736)
Q Consensus 590 -~~~d~~ri~~~G~S~GG~la~~~~ 613 (736)
|. ..+||++.|.|+||.|...++
T Consensus 464 lG~-TgEriv~aGDSAGgNL~~~Va 487 (880)
T KOG4388|consen 464 LGS-TGERIVLAGDSAGGNLCFTVA 487 (880)
T ss_pred hCc-ccceEEEeccCCCcceeehhH
Confidence 44 358999999999998765444
No 324
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.09 E-value=0.047 Score=53.97 Aligned_cols=75 Identities=19% Similarity=0.151 Sum_probs=43.6
Q ss_pred ccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC----CceeEEEEcCC
Q 004690 553 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP----DLFKAAVAAVP 628 (736)
Q Consensus 553 ~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p----~~~~a~v~~~p 628 (736)
+||.......|.+........ .......|++|+.+.-.-.++.|.+.|||.||.+|..++...+ +++..++...+
T Consensus 43 FRGTd~t~~~W~ed~~~~~~~-~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 43 FRGTDDTLVDWKEDFNMSFQD-ETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred EECCCCchhhHHHHHHhhcCC-CCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 455544445565543332221 1223356666765442223456999999999999998887733 35666664443
No 325
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=95.07 E-value=1 Score=43.84 Aligned_cols=186 Identities=16% Similarity=0.179 Sum_probs=101.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCc---cceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV---TASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~---~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
+..+++|-|-++|+ .|+...-|+|+|++.-+..+..+.+. ...+.|.... .|+=.+.+. .|.+++.
T Consensus 103 vk~~af~~ds~~ll-----tgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~-----tVRLWD~ 172 (334)
T KOG0278|consen 103 VKAVAFSQDSNYLL-----TGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDK-----TVRLWDH 172 (334)
T ss_pred eeeEEecccchhhh-----ccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCC-----ceEEEEe
Confidence 55667777777665 23334568899988766544444332 3347887666 665544333 3666666
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecc--cccee-EEEeeeCCEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR--VVGVD-TAASHRGNHFFI 345 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~--~~~~~-~~~s~dg~~l~~ 345 (736)
.++.. ...+. -+.+ .-+...|+||++|.+.-.+ .|-..|..+- .+|... .-+++ .+++|+. .+|+
T Consensus 173 rTgt~-v~sL~-~~s~--VtSlEvs~dG~ilTia~gs----sV~Fwdaksf---~~lKs~k~P~nV~SASL~P~k-~~fV 240 (334)
T KOG0278|consen 173 RTGTE-VQSLE-FNSP--VTSLEVSQDGRILTIAYGS----SVKFWDAKSF---GLLKSYKMPCNVESASLHPKK-EFFV 240 (334)
T ss_pred ccCcE-EEEEe-cCCC--CcceeeccCCCEEEEecCc----eeEEeccccc---cceeeccCccccccccccCCC-ceEE
Confidence 66622 22222 2211 1256679999998875332 2344555442 222221 12333 3477765 4665
Q ss_pred EEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCC-EEEEEEEeCCeeEEEEE
Q 004690 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTY 405 (736)
Q Consensus 346 ~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~l~~~~~~~g~~~l~v~ 405 (736)
..+. .+.+|+.|-.+... .-....+....+..+.+..+ -+|.+.+++|.-+|+..
T Consensus 241 aGge----d~~~~kfDy~TgeE-i~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt 296 (334)
T KOG0278|consen 241 AGGE----DFKVYKFDYNTGEE-IGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQT 296 (334)
T ss_pred ecCc----ceEEEEEeccCCce-eeecccCCCCceEEEEECCCCceeeccCCCceEEEEEe
Confidence 5444 47899999887432 22222222234455666655 35667778887555544
No 326
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.94 E-value=0.43 Score=45.32 Aligned_cols=111 Identities=15% Similarity=0.129 Sum_probs=65.6
Q ss_pred EEEEEecCCccCCCCCcEEEEecCCCCcCCC-C-------------CCchhHHHHHHCCcEEEEEcccCCCCCChhhhhc
Q 004690 501 ICIVYRKNLVKLDGSDPLLLYGYGSYEICND-P-------------AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (736)
Q Consensus 501 ~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~-~-------------~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 566 (736)
.+++..++. ...+..++|++||..-.... + .-.+....-...||-|++.|.- ..+.+++.
T Consensus 88 SFiF~s~~~--lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N----~~~kfye~ 161 (297)
T KOG3967|consen 88 SFIFMSEDA--LTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPN----RERKFYEK 161 (297)
T ss_pred ceEEEChhH--hcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCc----hhhhhhhc
Confidence 344555543 34456689999995322111 0 0113334556679999998863 12334432
Q ss_pred ccccc--CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc
Q 004690 567 GKFLK--KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL 619 (736)
Q Consensus 567 ~~~~~--~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~ 619 (736)
-.... -...++-+..+..+++.. ..+..|+++.||+||++++.++.+.|+-
T Consensus 162 k~np~kyirt~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 162 KRNPQKYIRTPVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred ccCcchhccchHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCc
Confidence 11111 123445555555555543 4568899999999999999999998863
No 327
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=94.90 E-value=0.06 Score=36.73 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=21.8
Q ss_pred eEEEEEEcCCccEEEEEecCc--ceeEEEE
Q 004690 286 YSLGLQASESKKFLFIASESK--ITRFVFY 313 (736)
Q Consensus 286 ~~~~~~~S~Dg~~l~~~~~~~--~~~~l~~ 313 (736)
....+.|||||++|+|.+... +..+||+
T Consensus 10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 344688999999999999877 7778875
No 328
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=94.84 E-value=4.9 Score=40.33 Aligned_cols=194 Identities=16% Similarity=0.206 Sum_probs=100.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCee-cccccCc-cceeEEeeCC-eEEEEEeCCCCCCceEEEEEcC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GKPLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~-~~~~~~~-~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
+..+.||+|.++|.-.+. .| .|-|||.-|.... ..+++.. .-..++||.| .++--..|. ...|| ++.
T Consensus 58 i~~~~ws~Dsr~ivSaSq-DG----klIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN---~Csiy--~ls 127 (343)
T KOG0286|consen 58 IYAMDWSTDSRRIVSASQ-DG----KLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN---KCSIY--PLS 127 (343)
T ss_pred eeeeEecCCcCeEEeecc-CC----eEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCc---eeEEE--ecc
Confidence 567899999999975443 34 5999998876543 3345443 3447999999 454433332 23345 444
Q ss_pred CCCCC-cEEEEee--cCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEee-eCCEEE
Q 004690 270 ADQSN-DICLYHE--KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH-RGNHFF 344 (736)
Q Consensus 270 t~~~~-~~~~~~~--~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~-dg~~l~ 344 (736)
+...+ ...+-.+ ....|.....+.+|+. |+-.+. ....-+.|+++++..+.+.....++- ..++| +++.+
T Consensus 128 ~~d~~g~~~v~r~l~gHtgylScC~f~dD~~-ilT~SG---D~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntF- 202 (343)
T KOG0286|consen 128 TRDAEGNVRVSRELAGHTGYLSCCRFLDDNH-ILTGSG---DMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTF- 202 (343)
T ss_pred cccccccceeeeeecCccceeEEEEEcCCCc-eEecCC---CceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeE-
Confidence 33111 1111111 1223443456777664 333222 23346678888763344444544443 34777 66543
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEE-EEEeCCeeEEEEEEcCC
Q 004690 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAV-YEREGGLQKITTYRLPA 409 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~-~~~~~g~~~l~v~~l~~ 409 (736)
+...-+. ..+| .|+..+...+....++.+ +..+.+++++..| ...+++. .++|++..
T Consensus 203 vSg~cD~--~akl--WD~R~~~c~qtF~ghesD--INsv~ffP~G~afatGSDD~t--cRlyDlRa 260 (343)
T KOG0286|consen 203 VSGGCDK--SAKL--WDVRSGQCVQTFEGHESD--INSVRFFPSGDAFATGSDDAT--CRLYDLRA 260 (343)
T ss_pred Eeccccc--ceee--eeccCcceeEeecccccc--cceEEEccCCCeeeecCCCce--eEEEeecC
Confidence 3333331 2334 444432222224444444 5567777665433 4556665 44677763
No 329
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.84 E-value=0.042 Score=55.23 Aligned_cols=84 Identities=17% Similarity=0.042 Sum_probs=53.6
Q ss_pred cEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHH-HHHHHcCCCCCC
Q 004690 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCTKE 595 (736)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d~~ 595 (736)
|.|+++|++.|.. ..|.+....|... ..|+..+.+|-+.... ...+++|..+.. +.+.+.. ...
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----------~~~~l~~~a~~yv~~Ir~~Q--P~G 65 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----------PFASLDDMAAAYVAAIRRVQ--PEG 65 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHHHhccC-ceeeccccCccccccc----------ccCCHHHHHHHHHHHHHHhC--CCC
Confidence 5688999976643 3356555566555 8888888888654222 123445555432 2222221 124
Q ss_pred cEEEEEeChHHHHHHHHHHh
Q 004690 596 KLCIEGRSAGGLLIGAVLNM 615 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~ 615 (736)
...+.|+|+||.++..+|.+
T Consensus 66 Py~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 66 PYVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred CEEEEeeccccHHHHHHHHH
Confidence 79999999999999888865
No 330
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.82 E-value=2.2 Score=41.89 Aligned_cols=117 Identities=14% Similarity=0.112 Sum_probs=60.7
Q ss_pred CCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHC-C--cEEEEEcccCCCCCChhhhhcccccc
Q 004690 495 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-G--FIFAIAQIRGGGELGRQWYENGKFLK 571 (736)
Q Consensus 495 dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G--~~v~~~d~RG~g~~g~~~~~~~~~~~ 571 (736)
.|..+....+.|--. +.+.+.|.++++-|.+|... .|...+..|... + .-+..+-.-|+-.....-.+......
T Consensus 9 ~gl~~si~~~~~~v~-~~~~~~~li~~IpGNPG~~g--FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~ 85 (301)
T KOG3975|consen 9 SGLPTSILTLKPWVT-KSGEDKPLIVWIPGNPGLLG--FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTN 85 (301)
T ss_pred cCCcccceeeeeeec-cCCCCceEEEEecCCCCchh--HHHHHHHHHHHhcccccceeEEeccccccCCccccccccccc
Confidence 344444443444333 34467899999999777543 244444444332 2 22333333343333322222211111
Q ss_pred -CcChHHHHHH-HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004690 572 -KKNTFTDFIA-CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (736)
Q Consensus 572 -~~~~~~D~~~-~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~ 615 (736)
..-+++|-+. -++++.+. ...-.||.++|||-|+++++.++-.
T Consensus 86 ~eifsL~~QV~HKlaFik~~-~Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 86 EEIFSLQDQVDHKLAFIKEY-VPKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred ccccchhhHHHHHHHHHHHh-CCCCCEEEEEecchhHHHHHHHhhh
Confidence 1123344433 34455443 2333699999999999999999874
No 331
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=94.80 E-value=0.84 Score=51.18 Aligned_cols=193 Identities=19% Similarity=0.166 Sum_probs=101.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECC-----CCCe---------ecccccCccceeEEeeCCeEEEEEe-CC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-----TGTP---------VGKPLVGVTASVEWAGNEALVYITM-DE 256 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~-----tg~~---------~~~~~~~~~~~~~WspDg~l~y~~~-~~ 256 (736)
.+..++.+|||+..+-. +...++.+||.. .|.. +.+.+++....++.||||+++-++. |.
T Consensus 456 aIWsi~~~pD~~g~vT~-----saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdn 530 (888)
T KOG0306|consen 456 AIWSISLSPDNKGFVTG-----SADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDN 530 (888)
T ss_pred ceeeeeecCCCCceEEe-----cCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccC
Confidence 47778899999987633 223456655532 2222 1234555566789999995544443 33
Q ss_pred CCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeE-E
Q 004690 257 ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-A 335 (736)
Q Consensus 257 ~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~-~ 335 (736)
+ -+||. +++-. =-..+|...-|- ..+..|||++.|+-.+. ..+-.+|=+|..+ .-+-+..+.+.+-+ .
T Consensus 531 T---VkVyf--lDtlK-FflsLYGHkLPV--~smDIS~DSklivTgSA-DKnVKiWGLdFGD--CHKS~fAHdDSvm~V~ 599 (888)
T KOG0306|consen 531 T---VKVYF--LDTLK-FFLSLYGHKLPV--LSMDISPDSKLIVTGSA-DKNVKIWGLDFGD--CHKSFFAHDDSVMSVQ 599 (888)
T ss_pred e---EEEEE--eccee-eeeeecccccce--eEEeccCCcCeEEeccC-CCceEEeccccch--hhhhhhcccCceeEEE
Confidence 2 23444 33320 123344433333 34556999987654443 3445677776643 23445555555443 3
Q ss_pred EeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 336 ~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
+-| ..+++|...++ .++-..|.+.....+.+-.+..++.-..+.+.++++ ++..++-. |.+|..+
T Consensus 600 F~P-~~~~FFt~gKD----~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~v-vs~shD~s--IRlwE~t 664 (888)
T KOG0306|consen 600 FLP-KTHLFFTCGKD----GKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFV-VSSSHDKS--IRLWERT 664 (888)
T ss_pred Ecc-cceeEEEecCc----ceEEeechhhhhhheeeccchheeeeeEEcCCCCeE-EeccCCce--eEeeecc
Confidence 666 57788888876 345555544322222233343343333444444433 34444332 5566544
No 332
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=94.79 E-value=0.73 Score=47.94 Aligned_cols=110 Identities=14% Similarity=0.094 Sum_probs=54.5
Q ss_pred EEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004690 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (736)
Q Consensus 289 ~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~ 367 (736)
++.|.|.-..|+..+ +++ -|-+.|..++..+-.+.....-+- ..|.++|++|+-.+.+. .+-++|+..-.+
T Consensus 227 svdWHP~kgLiasgs--kDn-lVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~-----~~kv~DiR~mkE 298 (464)
T KOG0284|consen 227 SVDWHPTKGLIASGS--KDN-LVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQ-----SCKVFDIRTMKE 298 (464)
T ss_pred eeccCCccceeEEcc--CCc-eeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCc-----eEEEEehhHhHH
Confidence 467888765444322 222 456678777652222333333332 34889997666554332 344455542111
Q ss_pred eeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 368 TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 368 ~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
....-.+..++.-..+.+....|+...-.+|. +..+.+.
T Consensus 299 l~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgs--vvh~~v~ 337 (464)
T KOG0284|consen 299 LFTYRGHKKDVTSLTWHPLNESLFTSGGSDGS--VVHWVVG 337 (464)
T ss_pred HHHhhcchhhheeeccccccccceeeccCCCc--eEEEecc
Confidence 11133344444434445555666666655554 4444444
No 333
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=94.73 E-value=13 Score=44.66 Aligned_cols=133 Identities=11% Similarity=0.087 Sum_probs=72.5
Q ss_pred EEEEEcCCccEEEEEecC--cceeEEEEEeCCCCCceEEeeccccce--eEEEeeeCCEEEEEEcCCCCCCcEEEEEeCC
Q 004690 288 LGLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGV--DTAASHRGNHFFITRRSDELFNSELLACPVD 363 (736)
Q Consensus 288 ~~~~~S~Dg~~l~~~~~~--~~~~~l~~~dl~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~ 363 (736)
.+++|--||++++++.-. .+...+.+.|.+ |. +........+. ...|-|.|..+...-... . ..+|....-+
T Consensus 199 ~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~-Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~-s-d~~IvffErN 274 (1265)
T KOG1920|consen 199 TSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GA-LNSTSEPVEGLQHSLSWKPSGSLIAAIQCKT-S-DSDIVFFERN 274 (1265)
T ss_pred ceEEEccCCcEEEEEEEeccCCceeEEEeccc-ch-hhcccCcccccccceeecCCCCeEeeeeecC-C-CCcEEEEecC
Confidence 358999999999987633 233567777766 33 22222222222 245888888776554433 2 2367776666
Q ss_pred CCCceeeEecCCCCce-eeeEEEeCCE--EEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcc
Q 004690 364 NTSETTVLIPHRESVK-LQDIQLFIDH--LAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV 429 (736)
Q Consensus 364 ~~~~~~~l~~~~~~~~-i~~~~~~~~~--l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~ 429 (736)
+.....-.++...+.. ++.+.|..+. |++........++.+|.....- |..++.+.+|...
T Consensus 275 GL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh-----WYLKq~l~~~~~~ 338 (1265)
T KOG1920|consen 275 GLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH-----WYLKQELQFSQKA 338 (1265)
T ss_pred CccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE-----EEEEEEEeccccc
Confidence 5333333444444443 7788887653 3333333334458888765321 2334566666543
No 334
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=94.70 E-value=0.47 Score=48.71 Aligned_cols=114 Identities=18% Similarity=0.210 Sum_probs=71.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
.+-.+++++++.++||-.+.. ..+|+++|+.+-+.... .-++....+++++||.++-++.+.+ .-+..+.+.
T Consensus 131 gl~AlS~n~~n~ylAyp~s~t---~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKG---TVIRVf~v~ 204 (391)
T KOG2110|consen 131 GLCALSPNNANCYLAYPGSTT---SGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKG---TVIRVFSVP 204 (391)
T ss_pred ceEeeccCCCCceEEecCCCC---CceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCc---eEEEEEEcC
Confidence 455667777888999986654 34799999987665542 1233456689999997666665432 334555554
Q ss_pred CCCCCcEEEEeecC---CceEEEEEEcCCccEEEEEecCcceeEEEEEeC
Q 004690 270 ADQSNDICLYHEKD---DIYSLGLQASESKKFLFIASESKITRFVFYLDV 316 (736)
Q Consensus 270 t~~~~~~~~~~~~~---~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl 316 (736)
++ .++++-.. +....+++|+||+++|..+++. ++-+||.++.
T Consensus 205 ~G----~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T-eTVHiFKL~~ 249 (391)
T KOG2110|consen 205 EG----QKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT-ETVHIFKLEK 249 (391)
T ss_pred Cc----cEeeeeeCCceeeEEEEEEECCCCCeEEEecCC-CeEEEEEecc
Confidence 44 24454332 2234578899999988776554 3445565544
No 335
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=94.67 E-value=0.26 Score=49.88 Aligned_cols=106 Identities=19% Similarity=0.170 Sum_probs=45.5
Q ss_pred CCCCcEEEEecCCCCcCCCC-CCchhHHHHHH---CCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHH
Q 004690 513 DGSDPLLLYGYGSYEICNDP-AFNSSRLSLLD---RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (736)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~-~~~~~~~~l~~---~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (736)
..+.|+| +.||-...+..+ .+.. ...+.+ -|.-|..++. | ..+.+......-.+.-+.+..+.+.|.+
T Consensus 3 ~~~~PvV-iwHGmGD~~~~~~~m~~-i~~~i~~~~PG~yV~si~i-g-----~~~~~D~~~s~f~~v~~Qv~~vc~~l~~ 74 (279)
T PF02089_consen 3 PSPLPVV-IWHGMGDSCCNPSSMGS-IKELIEEQHPGTYVHSIEI-G-----NDPSEDVENSFFGNVNDQVEQVCEQLAN 74 (279)
T ss_dssp TSS--EE-EE--TT--S--TTTHHH-HHHHHHHHSTT--EEE--S-S-----SSHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCcEE-EEEcCccccCChhHHHH-HHHHHHHhCCCceEEEEEE-C-----CCcchhhhhhHHHHHHHHHHHHHHHHhh
Confidence 3456755 469965544333 2332 233333 2766666665 2 1111100000001122334445555555
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEcC
Q 004690 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAV 627 (736)
Q Consensus 589 ~~~~d~~ri~~~G~S~GG~la~~~~~~~p~-~~~a~v~~~ 627 (736)
..... +-+-++|+|.||.+.=+++.+.|+ .++-.|...
T Consensus 75 ~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlg 113 (279)
T PF02089_consen 75 DPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLG 113 (279)
T ss_dssp -GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES
T ss_pred Chhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEec
Confidence 43322 568999999999888777777664 366666554
No 336
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=94.46 E-value=0.44 Score=52.12 Aligned_cols=142 Identities=12% Similarity=0.091 Sum_probs=73.2
Q ss_pred EEEeeEEECC-CCCEEEEEEeCCCCcEEEEEEEECCCCCeecc------cccC-ccceeEEeeCC-eEEEEEeCCCCCCc
Q 004690 191 YSVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK------PLVG-VTASVEWAGNE-ALVYITMDEILRPD 261 (736)
Q Consensus 191 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~------~~~~-~~~~~~WspDg-~l~y~~~~~~~~~~ 261 (736)
..+..+.|-| |-.+||...+. | ...||-+...++..... ++.. ...++.|.|=- .++.++. ...
T Consensus 628 t~vtDl~WdPFD~~rLAVa~dd-g--~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~as----yd~ 700 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDD-G--QINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVAS----YDS 700 (1012)
T ss_pred ceeeecccCCCChHHeeecccC-c--eEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhh----ccc
Confidence 3567778888 77778876653 2 33444444433332211 1111 12336666554 2222211 223
Q ss_pred eEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecc-----ccceeEEE
Q 004690 262 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-----VVGVDTAA 336 (736)
Q Consensus 262 ~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~-----~~~~~~~~ 336 (736)
.|.++++.+. ++..-+.+..+. ..+++|||||+.++-...+. .|++++..+++ +++..+ ..+....|
T Consensus 701 Ti~lWDl~~~--~~~~~l~gHtdq-If~~AWSpdGr~~AtVcKDg---~~rVy~Prs~e--~pv~Eg~gpvgtRgARi~w 772 (1012)
T KOG1445|consen 701 TIELWDLANA--KLYSRLVGHTDQ-IFGIAWSPDGRRIATVCKDG---TLRVYEPRSRE--QPVYEGKGPVGTRGARILW 772 (1012)
T ss_pred eeeeeehhhh--hhhheeccCcCc-eeEEEECCCCcceeeeecCc---eEEEeCCCCCC--CccccCCCCccCcceeEEE
Confidence 4667788766 333334333223 44899999999987655442 35666666554 223222 12333447
Q ss_pred eeeCCEEEEEE
Q 004690 337 SHRGNHFFITR 347 (736)
Q Consensus 337 s~dg~~l~~~t 347 (736)
.-||+.++++.
T Consensus 773 acdgr~viv~G 783 (1012)
T KOG1445|consen 773 ACDGRIVIVVG 783 (1012)
T ss_pred EecCcEEEEec
Confidence 67777655544
No 337
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=94.45 E-value=4.6 Score=40.63 Aligned_cols=111 Identities=11% Similarity=0.035 Sum_probs=65.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc---cCccceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---VGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
.+....|+|||..+|- +|. ..+|++|++.+...---.+ .++.-.+.|.+|+..+|....+. .|+.+++
T Consensus 49 eI~~~~F~P~gs~~aS----gG~-Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk----~v~~wD~ 119 (338)
T KOG0265|consen 49 EIYTIKFHPDGSCFAS----GGS-DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDK----TVRGWDA 119 (338)
T ss_pred eEEEEEECCCCCeEee----cCC-cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCc----eEEEEec
Confidence 4677899999999882 344 5689999976543321122 23455689999995555554432 4888888
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL 314 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~ 314 (736)
.+++. ..-+.. +..+.-.+.-+.-|-.|+.+.++..+-.||-+
T Consensus 120 ~tG~~--~rk~k~-h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~ 162 (338)
T KOG0265|consen 120 ETGKR--IRKHKG-HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDI 162 (338)
T ss_pred cccee--eehhcc-ccceeeecCccccCCeEEEecCCCceEEEEee
Confidence 88732 222221 22333233345556666665555555555543
No 338
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=94.43 E-value=0.45 Score=50.67 Aligned_cols=137 Identities=20% Similarity=0.207 Sum_probs=82.3
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-c-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
..++|||-+ ++|+.-..| .|.|||+.....++. . -.+..+.+..|+|| +|+--..| +.|..+++.++
T Consensus 514 ALa~spDak-vcFsccsdG----nI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlD-----ntvRcWDlreg 583 (705)
T KOG0639|consen 514 ALAISPDAK-VCFSCCSDG----NIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLD-----NTVRCWDLREG 583 (705)
T ss_pred hhhcCCccc-eeeeeccCC----cEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCc-----cceeehhhhhh
Confidence 457899987 678877777 499999988766553 1 12234568999999 56543333 34777787765
Q ss_pred CCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEEcCC
Q 004690 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSD 350 (736)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~ 350 (736)
. ...-++- .....++...|.|.||++...+ +.++++...+.+ --.|.-.+.-+. .-|++.|+++ +.+..+
T Consensus 584 r--qlqqhdF--~SQIfSLg~cP~~dWlavGMen---s~vevlh~skp~-kyqlhlheScVLSlKFa~cGkwf-vStGkD 654 (705)
T KOG0639|consen 584 R--QLQQHDF--SSQIFSLGYCPTGDWLAVGMEN---SNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKWF-VSTGKD 654 (705)
T ss_pred h--hhhhhhh--hhhheecccCCCccceeeeccc---CcEEEEecCCcc-ceeecccccEEEEEEecccCcee-eecCch
Confidence 2 2111111 1223467789999999997643 456777776654 223332222121 2378888854 444444
No 339
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=94.36 E-value=0.88 Score=47.76 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=68.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeCCeEEEEEeCCCCCCceEEEEEcC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
+...++.|||-.++ .|.....|.|||+.++.... .+++ ....++|+.+|..+.+..++. .|.+++|.
T Consensus 350 ~ts~~fHpDgLifg-----tgt~d~~vkiwdlks~~~~a-~Fpght~~vk~i~FsENGY~Lat~add~----~V~lwDLR 419 (506)
T KOG0289|consen 350 YTSAAFHPDGLIFG-----TGTPDGVVKIWDLKSQTNVA-KFPGHTGPVKAISFSENGYWLATAADDG----SVKLWDLR 419 (506)
T ss_pred eEEeeEcCCceEEe-----ccCCCceEEEEEcCCccccc-cCCCCCCceeEEEeccCceEEEEEecCC----eEEEEEeh
Confidence 45566777775554 24556789999999877543 2332 245689999994444444432 27778876
Q ss_pred CCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEe
Q 004690 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 325 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l 325 (736)
... ...-+.-.+..-..++.+...|++|.+.. ..-.||..+-.+.. |+.+
T Consensus 420 Kl~--n~kt~~l~~~~~v~s~~fD~SGt~L~~~g---~~l~Vy~~~k~~k~-W~~~ 469 (506)
T KOG0289|consen 420 KLK--NFKTIQLDEKKEVNSLSFDQSGTYLGIAG---SDLQVYICKKKTKS-WTEI 469 (506)
T ss_pred hhc--ccceeeccccccceeEEEcCCCCeEEeec---ceeEEEEEeccccc-ceee
Confidence 542 11122111111134567889999998862 23346666655544 5554
No 340
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=94.34 E-value=0.51 Score=50.05 Aligned_cols=151 Identities=12% Similarity=0.124 Sum_probs=86.2
Q ss_pred EEEeeEEECC-CCCEEEEEEeCCCCcEEEEEEEECCC-CCeecccccC---ccceeEEeeCC-eEEEEEeCCCCCCceEE
Q 004690 191 YSVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAW 264 (736)
Q Consensus 191 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~l~v~dl~t-g~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~v~ 264 (736)
-.++...|.| .|.+|+- ++-...|+||++-+ +..++ ++-+ ....+.|+++| +|+=.++|. -|.
T Consensus 215 kgvsai~~fp~~~hLlLS-----~gmD~~vklW~vy~~~~~lr-tf~gH~k~Vrd~~~s~~g~~fLS~sfD~-----~lK 283 (503)
T KOG0282|consen 215 KGVSAIQWFPKKGHLLLS-----GGMDGLVKLWNVYDDRRCLR-TFKGHRKPVRDASFNNCGTSFLSASFDR-----FLK 283 (503)
T ss_pred cccchhhhccceeeEEEe-----cCCCceEEEEEEecCcceeh-hhhcchhhhhhhhccccCCeeeeeecce-----eee
Confidence 4578889999 6666552 22346799998865 44444 2222 24568999999 677666654 366
Q ss_pred EEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecc-cccee-EEEeeeCCE
Q 004690 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVD-TAASHRGNH 342 (736)
Q Consensus 265 ~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~-~~~~~-~~~s~dg~~ 342 (736)
++++.|++ ...-|......+ -+.+.||+..+++.... ..+|..+|..+++ +..-..+ ...+. ..|-++|.+
T Consensus 284 lwDtETG~--~~~~f~~~~~~~--cvkf~pd~~n~fl~G~s--d~ki~~wDiRs~k-vvqeYd~hLg~i~~i~F~~~g~r 356 (503)
T KOG0282|consen 284 LWDTETGQ--VLSRFHLDKVPT--CVKFHPDNQNIFLVGGS--DKKIRQWDIRSGK-VVQEYDRHLGAILDITFVDEGRR 356 (503)
T ss_pred eeccccce--EEEEEecCCCce--eeecCCCCCcEEEEecC--CCcEEEEeccchH-HHHHHHhhhhheeeeEEccCCce
Confidence 77888873 233333222222 34578999777765433 2457778888876 2211111 11122 235566776
Q ss_pred EEEEEcCCCCCCcEEEEEeC
Q 004690 343 FFITRRSDELFNSELLACPV 362 (736)
Q Consensus 343 l~~~t~~~~~~~~~l~~~~~ 362 (736)
++-.++.. +.+++-...
T Consensus 357 FissSDdk---s~riWe~~~ 373 (503)
T KOG0282|consen 357 FISSSDDK---SVRIWENRI 373 (503)
T ss_pred EeeeccCc---cEEEEEcCC
Confidence 55554432 556665443
No 341
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=94.33 E-value=1.9 Score=44.96 Aligned_cols=154 Identities=10% Similarity=0.070 Sum_probs=75.3
Q ss_pred EEEeeEEECCCCCEEEEEEe-----CCC-CcEEEEEEEECCCCCeecccc-cCccceeEEeeCCeEEEEEeCCCCCCceE
Q 004690 191 YSVGCFQVSPDNKLVAYAED-----TKG-DEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNEALVYITMDEILRPDKA 263 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~-----~~G-~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~l~y~~~~~~~~~~~v 263 (736)
.......+.|||+..+=... ... .+.-.||.+|..++..+...- -.+..+++|||||+.+|.+... ..++
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~---~~~i 187 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTP---ANRI 187 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCC---CCeE
Confidence 34456678888886543333 111 112368888875444433221 1234569999999555555432 2357
Q ss_pred EEEEcCC--CC-CCcE-EEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEE-eeccc-cceeEEEe
Q 004690 264 WLHKLEA--DQ-SNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPRV-VGVDTAAS 337 (736)
Q Consensus 264 ~~~~l~t--~~-~~~~-~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-l~~~~-~~~~~~~s 337 (736)
+++++.. .. .... .++....+..--+.....||.+ ++ +.......|-+++.+ ++.... ..+.. ......-.
T Consensus 188 ~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~l-w~-~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG 264 (307)
T COG3386 188 HRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNL-WV-AAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGG 264 (307)
T ss_pred EEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCE-EE-ecccCCceEEEECCC-CcEEEEEECCCCCCccceEeC
Confidence 7776652 11 1111 1221111111112344556653 22 333333567777777 431222 22321 11122355
Q ss_pred eeCCEEEEEEcCC
Q 004690 338 HRGNHFFITRRSD 350 (736)
Q Consensus 338 ~dg~~l~~~t~~~ 350 (736)
++.+.||+.++..
T Consensus 265 ~~~~~L~iTs~~~ 277 (307)
T COG3386 265 PDLNTLYITSARS 277 (307)
T ss_pred CCcCEEEEEecCC
Confidence 7788999998876
No 342
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=94.29 E-value=2.3 Score=47.84 Aligned_cols=190 Identities=18% Similarity=0.192 Sum_probs=101.2
Q ss_pred EEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccc--ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEE----c
Q 004690 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK----L 268 (736)
Q Consensus 196 ~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~--~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~----l 268 (736)
..+-|.+++|..+.. .-.|.++|+++....... -++...+++-+||+ .++-.+.|..- +.|-.. .
T Consensus 418 ~~Fvpgd~~Iv~G~k-----~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktV---kfWdf~l~~~~ 489 (888)
T KOG0306|consen 418 SKFVPGDRYIVLGTK-----NGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTV---KFWDFKLVVSV 489 (888)
T ss_pred EEecCCCceEEEecc-----CCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEE---EEEeEEEEecc
Confidence 355677777665544 235888899888765431 23445567778999 55544444321 222111 1
Q ss_pred CCCCCCcE-----EEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCE
Q 004690 269 EADQSNDI-----CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNH 342 (736)
Q Consensus 269 ~t~~~~~~-----~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~ 342 (736)
++.+.+.. ..++-.+ -...+..||||++|++..-+. +-.||.+|.=.= ...|..+.--+. -.+|||++.
T Consensus 490 ~gt~~k~lsl~~~rtLel~d--dvL~v~~Spdgk~LaVsLLdn-TVkVyflDtlKF--flsLYGHkLPV~smDIS~DSkl 564 (888)
T KOG0306|consen 490 PGTQKKVLSLKHTRTLELED--DVLCVSVSPDGKLLAVSLLDN-TVKVYFLDTLKF--FLSLYGHKLPVLSMDISPDSKL 564 (888)
T ss_pred CcccceeeeeccceEEeccc--cEEEEEEcCCCcEEEEEeccC-eEEEEEecceee--eeeecccccceeEEeccCCcCe
Confidence 11111100 1121122 234577899999999876543 345666653210 111222222222 348898874
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEE
Q 004690 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYR 406 (736)
Q Consensus 343 l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~ 406 (736)
+ +....+ .|-+++-.|... --+-+++++..+.-..|.+ ..++++...+++. +..|+
T Consensus 565 i-vTgSAD--KnVKiWGLdFGD--CHKS~fAHdDSvm~V~F~P-~~~~FFt~gKD~k--vKqWD 620 (888)
T KOG0306|consen 565 I-VTGSAD--KNVKIWGLDFGD--CHKSFFAHDDSVMSVQFLP-KTHLFFTCGKDGK--VKQWD 620 (888)
T ss_pred E-EeccCC--CceEEeccccch--hhhhhhcccCceeEEEEcc-cceeEEEecCcce--EEeec
Confidence 4 443333 367787777643 1223778776554444555 5678888887775 44453
No 343
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=94.28 E-value=1.4 Score=45.24 Aligned_cols=117 Identities=16% Similarity=0.207 Sum_probs=69.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCccceeEEeeCC---eEEEEEeCC--------CC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE---ALVYITMDE--------IL 258 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~~~~~~WspDg---~l~y~~~~~--------~~ 258 (736)
.+..++++-||..+|- ++...+|.+|-+++++-... ..+-..--++|.|.. .+...+... ..
T Consensus 237 wvr~v~v~~DGti~As-----~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~S 311 (406)
T KOG0295|consen 237 WVRMVRVNQDGTIIAS-----CSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGS 311 (406)
T ss_pred hEEEEEecCCeeEEEe-----cCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeec
Confidence 4667888999999883 33357899999999843321 222233446787775 122222110 12
Q ss_pred CCceEEEEEcCCCCCCcEEEEe-ecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 259 RPDKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 259 ~~~~v~~~~l~t~~~~~~~~~~-~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
+..-+..+++.++ ..+++ .....+.-+++++|-|+||+-.+.++ .|.+.|+..+.
T Consensus 312 rDktIk~wdv~tg----~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk---tlrvwdl~~~~ 367 (406)
T KOG0295|consen 312 RDKTIKIWDVSTG----MCLFTLVGHDNWVRGVAFSPGGKYILSCADDK---TLRVWDLKNLQ 367 (406)
T ss_pred ccceEEEEeccCC----eEEEEEecccceeeeeEEcCCCeEEEEEecCC---cEEEEEeccce
Confidence 2334667788776 23443 23345666889999999987554433 24556666543
No 344
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=94.13 E-value=7.6 Score=39.56 Aligned_cols=114 Identities=18% Similarity=0.076 Sum_probs=58.3
Q ss_pred EEEEEcCCccEEEEEecCcceeEEEEEeCCCCC---c-eEEeeccc---ccee--EEEeeeCCEEEEEEcCCCCCCcEEE
Q 004690 288 LGLQASESKKFLFIASESKITRFVFYLDVSKPE---E-LRVLTPRV---VGVD--TAASHRGNHFFITRRSDELFNSELL 358 (736)
Q Consensus 288 ~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~---~-~~~l~~~~---~~~~--~~~s~dg~~l~~~t~~~~~~~~~l~ 358 (736)
.++.+||||.+|+.. ..+-|.+.|+..+. + ...++++. .++. ..++|.....+....-. ....||
T Consensus 162 hsL~Fs~DGeqlfaG----ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~--q~~giy 235 (406)
T KOG2919|consen 162 HSLQFSPDGEQLFAG----YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYG--QRVGIY 235 (406)
T ss_pred eeEEecCCCCeEeec----ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeeccc--ceeeeE
Confidence 468899999999863 23446666764432 1 11233322 2222 23666655443333221 134565
Q ss_pred EEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCC
Q 004690 359 ACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVG 411 (736)
Q Consensus 359 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g 411 (736)
.-+-.. .-..+..++..+.-..+..++++++.-.+.+ ..|-.|++...+
T Consensus 236 ~~~~~~--pl~llggh~gGvThL~~~edGn~lfsGaRk~--dkIl~WDiR~~~ 284 (406)
T KOG2919|consen 236 NDDGRR--PLQLLGGHGGGVTHLQWCEDGNKLFSGARKD--DKILCWDIRYSR 284 (406)
T ss_pred ecCCCC--ceeeecccCCCeeeEEeccCcCeecccccCC--CeEEEEeehhcc
Confidence 543222 2222444444444445566777777666654 357778876433
No 345
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=94.11 E-value=0.86 Score=47.42 Aligned_cols=105 Identities=20% Similarity=0.249 Sum_probs=61.9
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECC--------C-----CCee--ccccc---CccceeEEeeCC-eE
Q 004690 189 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE--------T-----GTPV--GKPLV---GVTASVEWAGNE-AL 249 (736)
Q Consensus 189 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~--------t-----g~~~--~~~~~---~~~~~~~WspDg-~l 249 (736)
....+..++|||+|..||-.-| .-++.+|-.. + .+.. ...+. .-.-.++|+||+ .+
T Consensus 64 H~~aVN~vRf~p~gelLASg~D-----~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l 138 (434)
T KOG1009|consen 64 HTRAVNVVRFSPDGELLASGGD-----GGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFL 138 (434)
T ss_pred CcceeEEEEEcCCcCeeeecCC-----CceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCcee
Confidence 3568999999999999994433 2344444332 3 1110 01111 112347999999 55
Q ss_pred EEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCc
Q 004690 250 VYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK 306 (736)
Q Consensus 250 ~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~ 306 (736)
...+.+. .++.+++..++ -..++. .+..+...++|.|-++||+-.+.+.
T Consensus 139 ~s~s~dn-----s~~l~Dv~~G~--l~~~~~-dh~~yvqgvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 139 VSGSVDN-----SVRLWDVHAGQ--LLAILD-DHEHYVQGVAWDPLNQYVASKSSDR 187 (434)
T ss_pred eeeeccc-----eEEEEEeccce--eEeecc-ccccccceeecchhhhhhhhhccCc
Confidence 5555443 37777887773 222332 2334555788999999987666544
No 346
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=94.10 E-value=11 Score=42.01 Aligned_cols=139 Identities=9% Similarity=0.064 Sum_probs=84.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccccc----CccceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV----GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~----~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
+..+++|.+.+.||.+... | .|-+|++..+=.....+. ....+++|++.++|+=+..+ ..|.-+++
T Consensus 28 I~slA~s~kS~~lAvsRt~-g----~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~s-----g~i~EwDl 97 (691)
T KOG2048|consen 28 IVSLAYSHKSNQLAVSRTD-G----NIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLS-----GSITEWDL 97 (691)
T ss_pred eEEEEEeccCCceeeeccC-C----cEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCC-----ceEEEEec
Confidence 5667889999999987664 3 478888887654433332 23566999966677654433 24777777
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccceeE--EEeeeCCEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDT--AASHRGNHFFI 345 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~~--~~s~dg~~l~~ 345 (736)
-+. +.....+.. ..-..+++..|.+..+++.+.++ -++.++...++ ....+..++.+... .|.++|.+|+.
T Consensus 98 ~~l--k~~~~~d~~-gg~IWsiai~p~~~~l~IgcddG---vl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~ 171 (691)
T KOG2048|consen 98 HTL--KQKYNIDSN-GGAIWSIAINPENTILAIGCDDG---VLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAG 171 (691)
T ss_pred ccC--ceeEEecCC-CcceeEEEeCCccceEEeecCCc---eEEEEecCCceEEEEeecccccceEEEEEecCCccEEEe
Confidence 766 333333322 23334677788888888876554 55666655544 33444555544333 47777776654
Q ss_pred EE
Q 004690 346 TR 347 (736)
Q Consensus 346 ~t 347 (736)
-+
T Consensus 172 Gs 173 (691)
T KOG2048|consen 172 GS 173 (691)
T ss_pred cc
Confidence 43
No 347
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=94.08 E-value=2.8 Score=42.52 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=80.1
Q ss_pred CCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-----cccCc--cceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004690 199 SPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PLVGV--TASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 199 SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-----~~~~~--~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
-|+-.+.|.++.. .-|.+||.-+|+.+.- ..+.. ..++.|||||.-+|..... .|...++..+
T Consensus 120 qP~t~l~a~ssr~-----~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykr-----cirvFdt~Rp 189 (406)
T KOG2919|consen 120 QPSTNLFAVSSRD-----QPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKR-----CIRVFDTSRP 189 (406)
T ss_pred CCccceeeecccc-----CceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccc-----eEEEeeccCC
Confidence 3777777766553 3599999999997631 12221 3458999999444444432 2333344211
Q ss_pred CCCcEEEEe---e-c--CCceEEEEEEcCCc-cEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEE
Q 004690 272 QSNDICLYH---E-K--DDIYSLGLQASESK-KFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHF 343 (736)
Q Consensus 272 ~~~~~~~~~---~-~--~~~~~~~~~~S~Dg-~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l 343 (736)
. .+-.++. . . -.....-+++||-. +.+++.+- .....||.- .++.++.++-.+..|+. ..|-++|++|
T Consensus 190 G-r~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY-~q~~giy~~--~~~~pl~llggh~gGvThL~~~edGn~l 265 (406)
T KOG2919|consen 190 G-RDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSY-GQRVGIYND--DGRRPLQLLGGHGGGVTHLQWCEDGNKL 265 (406)
T ss_pred C-CCCcchhhhhcccccccceeeeeeccCCCCcceeeecc-cceeeeEec--CCCCceeeecccCCCeeeEEeccCcCee
Confidence 1 1211221 1 1 11223335677744 34554432 222334432 23333556666666765 3589999998
Q ss_pred EEEEcCCCCCCcEEEEEeCCC
Q 004690 344 FITRRSDELFNSELLACPVDN 364 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~ 364 (736)
|.-+..+ -+|...|+..
T Consensus 266 fsGaRk~----dkIl~WDiR~ 282 (406)
T KOG2919|consen 266 FSGARKD----DKILCWDIRY 282 (406)
T ss_pred cccccCC----CeEEEEeehh
Confidence 8776654 3677777754
No 348
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=94.05 E-value=3.6 Score=43.48 Aligned_cols=196 Identities=13% Similarity=0.140 Sum_probs=110.6
Q ss_pred EEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCee-----cc-cc---cCccceeEEeeCC-eEEEEEeCCCCCCceEEE
Q 004690 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GK-PL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (736)
Q Consensus 196 ~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~-----~~-~~---~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~ 265 (736)
..|++.-.--.. +|++..+|.+||+...... +. .+ ......++|.+-. .+|-...++ ..|.+
T Consensus 183 lsWn~~~~g~Ll----s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd----~~L~i 254 (422)
T KOG0264|consen 183 LSWNRQQEGTLL----SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDD----GKLMI 254 (422)
T ss_pred cccccccceeEe----eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCC----CeEEE
Confidence 577764432222 2444567999998754331 11 11 2234557999887 554444333 35888
Q ss_pred EEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeecccccee-EEEeeeCCEE
Q 004690 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASHRGNHF 343 (736)
Q Consensus 266 ~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~-~~~s~dg~~l 343 (736)
+++.+...+........... ...++|.|-+.+|+.+.+.. +.|.+.|+..-. ++..+-...+.+. ..|||+.+.+
T Consensus 255 wD~R~~~~~~~~~~~ah~~~-vn~~~fnp~~~~ilAT~S~D--~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etv 331 (422)
T KOG0264|consen 255 WDTRSNTSKPSHSVKAHSAE-VNCVAFNPFNEFILATGSAD--KTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETV 331 (422)
T ss_pred EEcCCCCCCCcccccccCCc-eeEEEeCCCCCceEEeccCC--CcEEEeechhcccCceeccCCCcceEEEEeCCCCCce
Confidence 88875322222222221222 23577899888887765533 346777877654 2333444444443 3599999988
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCC-----------ceeeEecCC-CCceeeeEEEeCC--EEEEEEEeCCeeEEEEEEcC
Q 004690 344 FITRRSDELFNSELLACPVDNTS-----------ETTVLIPHR-ESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~~~-----------~~~~l~~~~-~~~~i~~~~~~~~--~l~~~~~~~g~~~l~v~~l~ 408 (736)
+..+..+ .+|.+.|+..-+ ..+.++.++ ....+.+|+|... +++.+..+++. +.||...
T Consensus 332 LASSg~D----~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~--LqIW~~s 404 (422)
T KOG0264|consen 332 LASSGTD----RRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNI--LQIWQMA 404 (422)
T ss_pred eEecccC----CcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCce--EEEeecc
Confidence 8877765 467776764321 122244443 3345778888765 67777777765 5566554
No 349
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=94.04 E-value=0.058 Score=53.35 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=17.0
Q ss_pred CcEEEEEeChHHHHHHHHHH
Q 004690 595 EKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~ 614 (736)
.+|.++|||+||.++-.++.
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 58999999999998866654
No 350
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=94.04 E-value=7.6 Score=39.21 Aligned_cols=188 Identities=14% Similarity=0.091 Sum_probs=87.6
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCC-CCeecc---cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~t-g~~~~~---~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~ 267 (736)
+|+.++|||.-..++...+. ..++++|+++. |...+. ..++-.-.+.|+.||+.+|+..-+ .++-+++
T Consensus 29 sIS~l~FSP~~~~~~~A~SW----D~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~D----k~~k~wD 100 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSW----DGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCD----KQAKLWD 100 (347)
T ss_pred chheeEeccccCceEEeccc----CCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccC----CceEEEE
Confidence 57889999944333323332 34788888875 554432 334444558999999555554322 1466779
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEEE
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITR 347 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t 347 (736)
|.+++. ..+-....+ . -.+.|-+...+=.+...+.+ ..|-..|.....++..+ ..++..|..+--...+++.+
T Consensus 101 L~S~Q~--~~v~~Hd~p-v-kt~~wv~~~~~~cl~TGSWD-KTlKfWD~R~~~pv~t~--~LPeRvYa~Dv~~pm~vVat 173 (347)
T KOG0647|consen 101 LASGQV--SQVAAHDAP-V-KTCHWVPGMNYQCLVTGSWD-KTLKFWDTRSSNPVATL--QLPERVYAADVLYPMAVVAT 173 (347)
T ss_pred ccCCCe--eeeeecccc-e-eEEEEecCCCcceeEecccc-cceeecccCCCCeeeee--eccceeeehhccCceeEEEe
Confidence 988843 223222222 1 13455554443222222221 22445566554311111 11222343322222233333
Q ss_pred cCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCC-EEEEEEEeCCe
Q 004690 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGL 399 (736)
Q Consensus 348 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~l~~~~~~~g~ 399 (736)
.. ..|..++|.++......+...-...+..++.+.| ..+....-+|+
T Consensus 174 a~-----r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGr 221 (347)
T KOG0647|consen 174 AE-----RHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGR 221 (347)
T ss_pred cC-----CcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecce
Confidence 22 3477777755322111222223344555655543 22334444554
No 351
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=94.01 E-value=1.6 Score=43.14 Aligned_cols=117 Identities=18% Similarity=0.165 Sum_probs=71.2
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECC-------CCCe-ecccc-cCccceeEEeeCC-eEEEEEeCCCCCC
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-------TGTP-VGKPL-VGVTASVEWAGNE-ALVYITMDEILRP 260 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~-------tg~~-~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~ 260 (736)
..+....+|++|+++++..+..=+....|.++|+. +.++ +.+.. +.......|+|-+ .|++--.+
T Consensus 94 ~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~----- 168 (327)
T KOG0643|consen 94 SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHED----- 168 (327)
T ss_pred CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCC-----
Confidence 35778899999999999998765557789999887 3332 22222 2234558999999 56554332
Q ss_pred ceEEEEEcCCCCCCcEEEEe-ecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCC
Q 004690 261 DKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (736)
Q Consensus 261 ~~v~~~~l~t~~~~~~~~~~-~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~ 318 (736)
..|-.+++.++. +++-. +....-.-++.+|+|..+. ++++...++. ++|..+
T Consensus 169 G~is~~da~~g~---~~v~s~~~h~~~Ind~q~s~d~T~F-iT~s~Dttak--l~D~~t 221 (327)
T KOG0643|consen 169 GSISIYDARTGK---ELVDSDEEHSSKINDLQFSRDRTYF-ITGSKDTTAK--LVDVRT 221 (327)
T ss_pred CcEEEEEcccCc---eeeechhhhccccccccccCCcceE-EecccCccce--eeeccc
Confidence 247777877762 12221 1112233467899999874 4444444444 445544
No 352
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=93.96 E-value=1.4 Score=44.22 Aligned_cols=194 Identities=12% Similarity=0.200 Sum_probs=100.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCC------------CCeec---c--cc-c--CccceeEEeeCCeEEEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET------------GTPVG---K--PL-V--GVTASVEWAGNEALVYI 252 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~t------------g~~~~---~--~~-~--~~~~~~~WspDg~l~y~ 252 (736)
....++||||.++| .|+....|.++|++- |.... . ++ + +-...+.|.|-.+|+..
T Consensus 115 cR~aafs~DG~lvA-----TGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS 189 (430)
T KOG0640|consen 115 CRAAAFSPDGSLVA-----TGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILIS 189 (430)
T ss_pred eeeeeeCCCCcEEE-----ccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEe
Confidence 45568999999998 455567899999871 11110 0 11 1 11345788888877665
Q ss_pred EeCCCCCCceEEEEEcCCCC-CCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeec---c
Q 004690 253 TMDEILRPDKAWLHKLEADQ-SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP---R 328 (736)
Q Consensus 253 ~~~~~~~~~~v~~~~l~t~~-~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~---~ 328 (736)
...+ ..|.+.+..... .+.-.++.+.. ...++++.|.|.+|++..... -+.++|+.+- ++..+ .
T Consensus 190 ~srD----~tvKlFDfsK~saKrA~K~~qd~~--~vrsiSfHPsGefllvgTdHp---~~rlYdv~T~---QcfvsanPd 257 (430)
T KOG0640|consen 190 GSRD----NTVKLFDFSKTSAKRAFKVFQDTE--PVRSISFHPSGEFLLVGTDHP---TLRLYDVNTY---QCFVSANPD 257 (430)
T ss_pred ccCC----CeEEEEecccHHHHHHHHHhhccc--eeeeEeecCCCceEEEecCCC---ceeEEeccce---eEeeecCcc
Confidence 5432 345555654332 12233444432 234678899999998865433 2455566553 23322 1
Q ss_pred c---ccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEE
Q 004690 329 V---VGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITT 404 (736)
Q Consensus 329 ~---~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v 404 (736)
. +++. ...++.|+ ||+....+| ..+|+ |--...-.+.+-.......+.+..++++.-|+..+ +-.+.+.+
T Consensus 258 ~qht~ai~~V~Ys~t~~-lYvTaSkDG--~Iklw--DGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsS-G~DS~vkL 331 (430)
T KOG0640|consen 258 DQHTGAITQVRYSSTGS-LYVTASKDG--AIKLW--DGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSS-GKDSTVKL 331 (430)
T ss_pred cccccceeEEEecCCcc-EEEEeccCC--cEEee--ccccHHHHHHHHhhcCCceeeeEEEccCCeEEeec-CCcceeee
Confidence 1 1122 12556554 888887774 23333 31110001111112223455566666665554433 22345677
Q ss_pred EEcCC
Q 004690 405 YRLPA 409 (736)
Q Consensus 405 ~~l~~ 409 (736)
|.+..
T Consensus 332 WEi~t 336 (430)
T KOG0640|consen 332 WEIST 336 (430)
T ss_pred eeecC
Confidence 77753
No 353
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=93.94 E-value=0.21 Score=63.61 Aligned_cols=99 Identities=12% Similarity=0.000 Sum_probs=62.3
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (736)
.|.++++||+.+... .|......| ..++.|+.++.+|.+... ....+++++.+.+...+..-. ...
T Consensus 1068 ~~~l~~lh~~~g~~~--~~~~l~~~l-~~~~~v~~~~~~g~~~~~----------~~~~~l~~la~~~~~~i~~~~-~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW--QFSVLSRYL-DPQWSIYGIQSPRPDGPM----------QTATSLDEVCEAHLATLLEQQ-PHG 1133 (1296)
T ss_pred CCCeEEecCCCCchH--HHHHHHHhc-CCCCcEEEEECCCCCCCC----------CCCCCHHHHHHHHHHHHHhhC-CCC
Confidence 356888999766432 355444444 457999999999876321 112344555544333332211 124
Q ss_pred cEEEEEeChHHHHHHHHHHh---CCCceeEEEEcCC
Q 004690 596 KLCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAVP 628 (736)
Q Consensus 596 ri~~~G~S~GG~la~~~~~~---~p~~~~a~v~~~p 628 (736)
+..++|||+||.++..++.+ +++.+..+++..+
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 79999999999999988875 5777777766543
No 354
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=93.90 E-value=1.6 Score=42.67 Aligned_cols=56 Identities=21% Similarity=0.211 Sum_probs=36.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYI 252 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~ 252 (736)
.|....|-...+-|.-+.+ .-++++||..||..+.. .++....++..++||.++-+
T Consensus 145 ~Ir~v~wc~eD~~iLSSad-----d~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTi 201 (334)
T KOG0278|consen 145 GIRTVLWCHEDKCILSSAD-----DKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTI 201 (334)
T ss_pred cceeEEEeccCceEEeecc-----CCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEE
Confidence 4666666655555554433 34699999999987753 44444566888999844433
No 355
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.78 E-value=20 Score=44.34 Aligned_cols=154 Identities=12% Similarity=0.141 Sum_probs=84.4
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc--c-------------CccceeEEeeCCeEEEEEeCCCC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--V-------------GVTASVEWAGNEALVYITMDEIL 258 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~--~-------------~~~~~~~WspDg~l~y~~~~~~~ 258 (736)
+.+.+++++..| |..+.+. ..|+++|+.+........ . +.-.++++.+++..+|++....
T Consensus 571 ~gvavd~~~g~l-yVaDs~n---~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n- 645 (1057)
T PLN02919 571 GKLAIDLLNNRL-FISDSNH---NRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTEN- 645 (1057)
T ss_pred ceEEEECCCCeE-EEEECCC---CeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCC-
Confidence 567888876655 4445433 478889987553322110 0 0124578888885556665332
Q ss_pred CCceEEEEEcCCCCCCcEEEEeec----------C----C--ceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCce
Q 004690 259 RPDKAWLHKLEADQSNDICLYHEK----------D----D--IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL 322 (736)
Q Consensus 259 ~~~~v~~~~l~t~~~~~~~~~~~~----------~----~--~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~ 322 (736)
+.|.++++.++ .+..+... . . ..-.+++++|++..|++... ....|+++|..++. .
T Consensus 646 --~~Ir~id~~~~---~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~--~~~~I~v~d~~~g~-v 717 (1057)
T PLN02919 646 --HALREIDFVNE---TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMA--GQHQIWEYNISDGV-T 717 (1057)
T ss_pred --ceEEEEecCCC---EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEEC--CCCeEEEEECCCCe-E
Confidence 34666666543 12222110 0 0 01135778997777777543 34568888887664 3
Q ss_pred EEeeccc-----cc-----------eeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004690 323 RVLTPRV-----VG-----------VDTAASHRGNHFFITRRSDELFNSELLACPVDN 364 (736)
Q Consensus 323 ~~l~~~~-----~~-----------~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~ 364 (736)
..+.... .+ ....++++|++||+.... +.+|.++|+++
T Consensus 718 ~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~----n~~Irv~D~~t 771 (1057)
T PLN02919 718 RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE----SSSIRALDLKT 771 (1057)
T ss_pred EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC----CCeEEEEECCC
Confidence 3222100 00 012478999988876443 46788888765
No 356
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.74 E-value=8.4 Score=38.72 Aligned_cols=130 Identities=9% Similarity=0.064 Sum_probs=73.7
Q ss_pred EECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCC--eEEEEEeCCCCCCceEEEEEcCCCCCC
Q 004690 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE--ALVYITMDEILRPDKAWLHKLEADQSN 274 (736)
Q Consensus 197 ~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg--~l~y~~~~~~~~~~~v~~~~l~t~~~~ 274 (736)
..-+||++=+.+.+..|. -.....++....+++++|-. .++|.+.+.+ ..+..+..+.+ +
T Consensus 42 f~~~dgs~g~a~~~eaGk-------------~v~~~~lpaR~Hgi~~~p~~~ravafARrPGt----f~~vfD~~~~~-~ 103 (366)
T COG3490 42 FDARDGSFGAATLSEAGK-------------IVFATALPARGHGIAFHPALPRAVAFARRPGT----FAMVFDPNGAQ-E 103 (366)
T ss_pred eeccCCceeEEEEccCCc-------------eeeeeecccccCCeecCCCCcceEEEEecCCc----eEEEECCCCCc-C
Confidence 345666666666555552 11122344444458888887 5888776532 24455665543 3
Q ss_pred cEEEEeecCCceEEEEEEcCCccEEEEEecCccee--EEEEEeCCCCCceEEeec----cccceeEEEeeeCCEEEEE
Q 004690 275 DICLYHEKDDIYSLGLQASESKKFLFIASESKITR--FVFYLDVSKPEELRVLTP----RVVGVDTAASHRGNHFFIT 346 (736)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~--~l~~~dl~~~~~~~~l~~----~~~~~~~~~s~dg~~l~~~ 346 (736)
.+++....+-.|+..-.+|+||++|+.+.++.+.+ -|=++|...+ ...+-. +..-.+..|.+||+.+++.
T Consensus 104 pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~--fqrvgE~~t~GiGpHev~lm~DGrtlvva 179 (366)
T COG3490 104 PVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG--FQRVGEFSTHGIGPHEVTLMADGRTLVVA 179 (366)
T ss_pred cEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc--cceecccccCCcCcceeEEecCCcEEEEe
Confidence 44555444555665566999999999988876543 2444454432 222221 1112244588999877665
No 357
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=93.70 E-value=10 Score=40.64 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=68.7
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccccc---CccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~---~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
+.+..+-.||+++|- |++.-.+.|+|..+...+. .+. .......|+|++ +++....|+. .+..+++
T Consensus 71 v~s~~fR~DG~Llaa-----GD~sG~V~vfD~k~r~iLR-~~~ah~apv~~~~f~~~d~t~l~s~sDd~----v~k~~d~ 140 (487)
T KOG0310|consen 71 VYSVDFRSDGRLLAA-----GDESGHVKVFDMKSRVILR-QLYAHQAPVHVTKFSPQDNTMLVSGSDDK----VVKYWDL 140 (487)
T ss_pred eeEEEeecCCeEEEc-----cCCcCcEEEeccccHHHHH-HHhhccCceeEEEecccCCeEEEecCCCc----eEEEEEc
Confidence 566778889999984 5556689999966643333 121 123446899998 7766665543 2445566
Q ss_pred CCCCCCcEEEEeec-CCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCC
Q 004690 269 EADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (736)
Q Consensus 269 ~t~~~~~~~~~~~~-~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~ 318 (736)
.+.. + .++.. ..++.-..+|+|-..+|+++.+-.+.-++|-....+
T Consensus 141 s~a~---v-~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~ 187 (487)
T KOG0310|consen 141 STAY---V-QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT 187 (487)
T ss_pred CCcE---E-EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC
Confidence 6652 2 33322 234444567899999998876655554555444443
No 358
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=93.68 E-value=3 Score=43.09 Aligned_cols=134 Identities=14% Similarity=0.079 Sum_probs=78.2
Q ss_pred EEEEEECCCCCeecc--cc-cCccceeEEeeCC---eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEE
Q 004690 218 TVYVIDIETGTPVGK--PL-VGVTASVEWAGNE---ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQ 291 (736)
Q Consensus 218 ~l~v~dl~tg~~~~~--~~-~~~~~~~~WspDg---~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~ 291 (736)
.|||+|+.+-+.+.. +. ++..+-.+.|+.. .++|-. .....+|+++++.+- ..+......+ .-..-++
T Consensus 107 ~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~---s~t~GdV~l~d~~nl--~~v~~I~aH~-~~lAala 180 (391)
T KOG2110|consen 107 SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPG---STTSGDVVLFDTINL--QPVNTINAHK-GPLAALA 180 (391)
T ss_pred cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecC---CCCCceEEEEEcccc--eeeeEEEecC-CceeEEE
Confidence 499999999887642 22 3334445666664 576643 333567888887654 3333443222 2334578
Q ss_pred EcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eE--EEeeeCCEEEEEEcCCCCCCcEEEEEeC
Q 004690 292 ASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DT--AASHRGNHFFITRRSDELFNSELLACPV 362 (736)
Q Consensus 292 ~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~--~~s~dg~~l~~~t~~~~~~~~~l~~~~~ 362 (736)
+++||..|+-.+..++--+|| ...+|+.+..+..+..-+ .| .|++++..|...++.+ .-++++++.
T Consensus 181 fs~~G~llATASeKGTVIRVf--~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te---TVHiFKL~~ 249 (391)
T KOG2110|consen 181 FSPDGTLLATASEKGTVIRVF--SVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE---TVHIFKLEK 249 (391)
T ss_pred ECCCCCEEEEeccCceEEEEE--EcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCC---eEEEEEecc
Confidence 999999887655554444444 445554222232222211 23 3899999777777764 466777654
No 359
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=93.67 E-value=2.1 Score=45.71 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=83.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCc-cceeEEeeCC-eEEEEEeCCCCCCceEEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~-~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~ 267 (736)
++.-..+||.-+.++-+....| .+.+||+.+..+.-. ....+ ..+++|+|-+ .|+.+. +...+|+.++
T Consensus 166 svRll~ys~skr~lL~~asd~G----~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsV----G~Dkki~~yD 237 (673)
T KOG4378|consen 166 SVRLLRYSPSKRFLLSIASDKG----AVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSV----GYDKKINIYD 237 (673)
T ss_pred eEEEeecccccceeeEeeccCC----eEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEe----cccceEEEee
Confidence 3456788999999998888777 588899987665421 12222 4568999999 454433 2234799999
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeecc
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPR 328 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~ 328 (736)
++.....+.+.++.+ ...++++++|.+|++.... .+|+.+|+...+ ++..+...
T Consensus 238 ~~s~~s~~~l~y~~P----lstvaf~~~G~~L~aG~s~---G~~i~YD~R~~k~Pv~v~sah 292 (673)
T KOG4378|consen 238 IRSQASTDRLTYSHP----LSTVAFSECGTYLCAGNSK---GELIAYDMRSTKAPVAVRSAH 292 (673)
T ss_pred cccccccceeeecCC----cceeeecCCceEEEeecCC---ceEEEEecccCCCCceEeeec
Confidence 998766677777543 2367899999998775432 468889988755 34444333
No 360
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.66 E-value=0.25 Score=50.95 Aligned_cols=117 Identities=20% Similarity=0.240 Sum_probs=72.2
Q ss_pred CCeEEeEEEEEecCCccCCCC-CcEEEEecCCCCcCCCCCCchhHHHHHHC---C------cEEEEEcccCCCCCChhhh
Q 004690 495 DGTQIPICIVYRKNLVKLDGS-DPLLLYGYGSYEICNDPAFNSSRLSLLDR---G------FIFAIAQIRGGGELGRQWY 564 (736)
Q Consensus 495 dG~~i~~~~~~p~~~~~~~~~-~P~vl~~hGg~~~~~~~~~~~~~~~l~~~---G------~~v~~~d~RG~g~~g~~~~ 564 (736)
.|.+|+..-+.|++. +..++ .| ||++||.+|+-.. |-.....|.+- | |-|++|.++|.| |.
T Consensus 132 eGL~iHFlhvk~p~~-k~~k~v~P-lLl~HGwPGsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGyg-----wS 202 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQK-KKKKKVKP-LLLLHGWPGSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYG-----WS 202 (469)
T ss_pred cceeEEEEEecCCcc-ccCCcccc-eEEecCCCchHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcc-----cC
Confidence 578888776777654 33333 45 6678998886433 33333344332 3 679999999766 33
Q ss_pred hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 004690 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 624 (736)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v 624 (736)
++..+ .+-+..+-..-...-+...|+ ++-.|.|+-+|..++..+|..+|+.+.+.=
T Consensus 203 d~~sk-~GFn~~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 203 DAPSK-TGFNAAATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred cCCcc-CCccHHHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 32221 222222222222223344565 789999999999999999999999876543
No 361
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=93.65 E-value=3.8 Score=46.05 Aligned_cols=194 Identities=11% Similarity=0.086 Sum_probs=101.7
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeC-----CeEEEEEeCCCCCCceE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGN-----EALVYITMDEILRPDKA 263 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspD-----g~l~y~~~~~~~~~~~v 263 (736)
+..+.+..+++|+.-+.+... ...+.|||+.+-+.+.. +.-....++...++ |.++|++..+. .+
T Consensus 192 ~S~vtsL~~~~d~~~~ls~~R-----Dkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g----~~ 262 (775)
T KOG0319|consen 192 KSAVTSLAFSEDSLELLSVGR-----DKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSG----VV 262 (775)
T ss_pred hhheeeeeeccCCceEEEecc-----CcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCc----eE
Confidence 556889999999988876644 25799999965443321 21112223555555 24666665432 23
Q ss_pred EEEEcCCCCCCcEEEEeec-CCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee--EEEeeeC
Q 004690 264 WLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRG 340 (736)
Q Consensus 264 ~~~~l~t~~~~~~~~~~~~-~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~--~~~s~dg 340 (736)
..++..++. .......+ .+.+........+++.+++++ ..+++++|.++....+.+....+.+. ..+.|+.
T Consensus 263 ~~~d~es~~--~~~~~~~~~~~e~~~~~~~~~~~~~l~vta----eQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~ 336 (775)
T KOG0319|consen 263 QYWDSESGK--CVYKQRQSDSEEIDHLLAIESMSQLLLVTA----EQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEE 336 (775)
T ss_pred EEEecccch--hhhhhccCCchhhhcceeccccCceEEEEc----cceEEEEEccccEEehhhcCCchhheeeeecCCcc
Confidence 344443331 10000001 111211122344555555543 24578888776541222333222221 2477888
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEE-EeCCEEEEEEEeCCeeEEEEEEcC
Q 004690 341 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ-LFIDHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 341 ~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~-~~~~~l~~~~~~~g~~~l~v~~l~ 408 (736)
++|++.||.. ..++| ++.+.. .. +++...+. +-+++ +..+.++....++.. +.+|+++
T Consensus 337 ~~laVATNs~---~lr~y--~~~~~~-c~-ii~GH~e~-vlSL~~~~~g~llat~sKD~s--vilWr~~ 395 (775)
T KOG0319|consen 337 SHLAVATNSP---ELRLY--TLPTSY-CQ-IIPGHTEA-VLSLDVWSSGDLLATGSKDKS--VILWRLN 395 (775)
T ss_pred ceEEEEeCCC---ceEEE--ecCCCc-eE-EEeCchhh-eeeeeecccCcEEEEecCCce--EEEEEec
Confidence 9999999975 57777 555532 22 55555444 33454 344446666666655 4566664
No 362
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=93.63 E-value=9.1 Score=38.75 Aligned_cols=159 Identities=9% Similarity=0.004 Sum_probs=83.8
Q ss_pred cceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeC
Q 004690 238 TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 316 (736)
Q Consensus 238 ~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl 316 (736)
..++++|+|| .++++..+ .....|+....++. ...+.+.. -...++|+++|...++ ........+++ +.
T Consensus 26 ~~s~AvS~dg~~~A~v~~~--~~~~~L~~~~~~~~---~~~~~~g~---~l~~PS~d~~g~~W~v-~~~~~~~~~~~-~~ 95 (253)
T PF10647_consen 26 VTSPAVSPDGSRVAAVSEG--DGGRSLYVGPAGGP---VRPVLTGG---SLTRPSWDPDGWVWTV-DDGSGGVRVVR-DS 95 (253)
T ss_pred ccceEECCCCCeEEEEEEc--CCCCEEEEEcCCCc---ceeeccCC---ccccccccCCCCEEEE-EcCCCceEEEE-ec
Confidence 4558999999 78888832 23346888776654 22333222 2346889999654443 33333333333 33
Q ss_pred CCCC-ceEEee-cccc-ce-eEEEeeeCCEEEEEEcCCCCCCcEEEEEeCC--CCCceeeE-----ecCCCCceeeeEEE
Q 004690 317 SKPE-ELRVLT-PRVV-GV-DTAASHRGNHFFITRRSDELFNSELLACPVD--NTSETTVL-----IPHRESVKLQDIQL 385 (736)
Q Consensus 317 ~~~~-~~~~l~-~~~~-~~-~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~--~~~~~~~l-----~~~~~~~~i~~~~~ 385 (736)
.++. ....+. +... .+ ...+||||.+++++...++ ..+|+...+. ..+....+ +.......+.++.|
T Consensus 96 ~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~--~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W 173 (253)
T PF10647_consen 96 ASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGG--GGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAW 173 (253)
T ss_pred CCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCC--CCeEEEEEEEeCCCCCcceeccceEecccccCcceeeee
Confidence 3333 122222 2222 23 3569999999999987653 3567765543 22211111 11122334567888
Q ss_pred eCC-EEEEEEEeCCeeEEEEEEcC
Q 004690 386 FID-HLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 386 ~~~-~l~~~~~~~g~~~l~v~~l~ 408 (736)
..+ .|++.....+.+....+..+
T Consensus 174 ~~~~~L~V~~~~~~~~~~~~v~~d 197 (253)
T PF10647_consen 174 SDDSTLVVLGRSAGGPVVRLVSVD 197 (253)
T ss_pred cCCCEEEEEeCCCCCceeEEEEcc
Confidence 775 55555555554433334444
No 363
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.36 E-value=0.83 Score=50.11 Aligned_cols=131 Identities=15% Similarity=0.111 Sum_probs=70.4
Q ss_pred CeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCC--------CCC-------------chhHHHHHHCCcEEEEEccc
Q 004690 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND--------PAF-------------NSSRLSLLDRGFIFAIAQIR 554 (736)
Q Consensus 496 G~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~--------~~~-------------~~~~~~l~~~G~~v~~~d~R 554 (736)
+..+..+++.... .....|+||++-||+|.+.. |.. ......|.+. ..++.+|.+
T Consensus 49 ~~~lfy~f~es~~---~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqP 124 (433)
T PLN03016 49 NVQFFYYFIKSEN---NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQP 124 (433)
T ss_pred CeEEEEEEEecCC---CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCC
Confidence 4556665444332 23567999999999886531 100 0011123332 457777866
Q ss_pred CCCCCChhhhhccccccC-cChHHHHHHHHH-HHHHcCCCCCCcEEEEEeChHHHHHHHHHHh----C------CCceeE
Q 004690 555 GGGELGRQWYENGKFLKK-KNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----R------PDLFKA 622 (736)
Q Consensus 555 G~g~~g~~~~~~~~~~~~-~~~~~D~~~~~~-~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~----~------p~~~~a 622 (736)
-+.|+... ........ ....+|+..++. |+..........+.|.|.|+||..+-.+|.. + +-.+++
T Consensus 125 vGtGfSy~--~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 125 VGSGFSYS--KTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCccCC--CCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 54444321 11101111 112245554433 3433333345679999999999866554432 2 124789
Q ss_pred EEEcCCccch
Q 004690 623 AVAAVPFVDV 632 (736)
Q Consensus 623 ~v~~~p~~d~ 632 (736)
++...|+++.
T Consensus 203 i~iGNg~t~~ 212 (433)
T PLN03016 203 YMLGNPVTYM 212 (433)
T ss_pred eEecCCCcCc
Confidence 9999997764
No 364
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=93.34 E-value=1.3 Score=46.22 Aligned_cols=146 Identities=14% Similarity=0.122 Sum_probs=82.4
Q ss_pred eEEEeeEEECCCCCEEE-EEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 190 FYSVGCFQVSPDNKLVA-YAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la-~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
++.-.-+..|-+....+ -..-.+|.-...|++||..++..+.. +..+...++.-++|| .++-.+.|+. +-.+
T Consensus 294 ~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdt-----l~vi 368 (459)
T KOG0288|consen 294 YCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDT-----LKVI 368 (459)
T ss_pred heeccccccccccceEecceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCc-----eeee
Confidence 44444444444444333 11122343345699999888776653 455566779999999 7655544432 5566
Q ss_pred EcCCCCCCcEEEEeecC---CceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEee--cccc-cee-EEEeee
Q 004690 267 KLEADQSNDICLYHEKD---DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT--PRVV-GVD-TAASHR 339 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~---~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~--~~~~-~~~-~~~s~d 339 (736)
++.+. +-...|.... ..-...+.+|||++|++..+.+ ..||+.++.+++ ...+. +... ++. ..|.+.
T Consensus 369 DlRt~--eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~d---gsv~iW~v~tgK-lE~~l~~s~s~~aI~s~~W~~s 442 (459)
T KOG0288|consen 369 DLRTK--EIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSAD---GSVYIWSVFTGK-LEKVLSLSTSNAAITSLSWNPS 442 (459)
T ss_pred ecccc--cEEEEeeccccccccccceeEECCCCceeeeccCC---CcEEEEEccCce-EEEEeccCCCCcceEEEEEcCC
Confidence 76665 2333443211 0002246689999999875543 357899998887 43322 2222 232 347777
Q ss_pred CCEEEEE
Q 004690 340 GNHFFIT 346 (736)
Q Consensus 340 g~~l~~~ 346 (736)
|..++-.
T Consensus 443 G~~Llsa 449 (459)
T KOG0288|consen 443 GSGLLSA 449 (459)
T ss_pred Cchhhcc
Confidence 7766543
No 365
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=93.30 E-value=0.21 Score=54.10 Aligned_cols=82 Identities=20% Similarity=0.156 Sum_probs=55.2
Q ss_pred CCchhHHHHHHCCcEE----EE--EcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHH
Q 004690 533 AFNSSRLSLLDRGFIF----AI--AQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGG 606 (736)
Q Consensus 533 ~~~~~~~~l~~~G~~v----~~--~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG 606 (736)
.|......|.+.||.. .+ .|.|-+- . .....+..+...++.+.+.. ..+|.|+||||||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~----------~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGg 130 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP----------A--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGG 130 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch----------h--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCc
Confidence 5777888898888763 22 3444322 1 11233466777777776543 4799999999999
Q ss_pred HHHHHHHHhCCC------ceeEEEEcCCc
Q 004690 607 LLIGAVLNMRPD------LFKAAVAAVPF 629 (736)
Q Consensus 607 ~la~~~~~~~p~------~~~a~v~~~p~ 629 (736)
.++..++...+. .+++.|..++.
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred hHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 999988877643 36777776654
No 366
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=93.17 E-value=0.31 Score=55.07 Aligned_cols=59 Identities=22% Similarity=0.257 Sum_probs=44.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMD 255 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~ 255 (736)
.+..+.+|||||+|+-..- ...|++||+.+|....- .++....++++||.| .|+-+..+
T Consensus 578 ritd~~FS~DgrWlisasm-----D~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd 638 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISASM-----DSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVD 638 (910)
T ss_pred ceeeeEeCCCCcEEEEeec-----CCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEec
Confidence 5889999999999986654 25799999999987753 344444569999999 55544433
No 367
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=93.07 E-value=3.8 Score=43.78 Aligned_cols=197 Identities=13% Similarity=0.100 Sum_probs=111.2
Q ss_pred eEEEeeEEECCCCC-EEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCccceeEEeeCCeEEEEEeCCCCCCceEEEE
Q 004690 190 FYSVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 190 ~~~~~~~~~SPDG~-~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~ 266 (736)
+..++...+||..- -+|.+.+ ..+.+++..+-..+.. .+.....++.|-.||+|+-.....+ .|-..
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S------~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG----~V~vf 95 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSS------VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESG----HVKVF 95 (487)
T ss_pred cCcceeEecCCCCCCceEEecc------cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcC----cEEEe
Confidence 45688889999433 2344432 3455556666555442 4556666799999998876554332 24455
Q ss_pred EcCCCCCCcEEEEee-cCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceE-EeeccccceeE-EEeeeCCEE
Q 004690 267 KLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR-VLTPRVVGVDT-AASHRGNHF 343 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~-~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~-~l~~~~~~~~~-~~s~dg~~l 343 (736)
++.+. .....+.. ..+ .-...++|++..++...++.....+|.+ ++.. .. .+....+-+.. .|+|-.+++
T Consensus 96 D~k~r--~iLR~~~ah~ap--v~~~~f~~~d~t~l~s~sDd~v~k~~d~--s~a~-v~~~l~~htDYVR~g~~~~~~~hi 168 (487)
T KOG0310|consen 96 DMKSR--VILRQLYAHQAP--VHVTKFSPQDNTMLVSGSDDKVVKYWDL--STAY-VQAELSGHTDYVRCGDISPANDHI 168 (487)
T ss_pred ccccH--HHHHHHhhccCc--eeEEEecccCCeEEEecCCCceEEEEEc--CCcE-EEEEecCCcceeEeeccccCCCeE
Confidence 53331 11112211 112 1235678999888887776655555544 4432 22 23344444443 388888889
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCCCCC
Q 004690 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGE 412 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~~g~ 412 (736)
++...-+| .-+||-+...+ .|+..-+.+..++.+..-+. .+++.. |-+.+.+|++..++.
T Consensus 169 vvtGsYDg--~vrl~DtR~~~----~~v~elnhg~pVe~vl~lpsgs~iasA---gGn~vkVWDl~~G~q 229 (487)
T KOG0310|consen 169 VVTGSYDG--KVRLWDTRSLT----SRVVELNHGCPVESVLALPSGSLIASA---GGNSVKVWDLTTGGQ 229 (487)
T ss_pred EEecCCCc--eEEEEEeccCC----ceeEEecCCCceeeEEEcCCCCEEEEc---CCCeEEEEEecCCce
Confidence 88877663 34454443322 45555555566777776665 454433 335689999985443
No 368
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.03 E-value=11 Score=37.94 Aligned_cols=101 Identities=10% Similarity=-0.007 Sum_probs=57.1
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCc--cceeEEeeCCeEEEEEeCCCCCCceE-EEEEcC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGV--TASVEWAGNEALVYITMDEILRPDKA-WLHKLE 269 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~--~~~~~WspDg~l~y~~~~~~~~~~~v-~~~~l~ 269 (736)
++.++|--.+-.+-..+.| ..-+++|..+++.... ..++. ++.-.|||||.++|.+.++......| =+++..
T Consensus 72 gi~~~p~~~ravafARrPG---tf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 72 GIAFHPALPRAVAFARRPG---TFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred CeecCCCCcceEEEEecCC---ceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 3578886665555555566 3578889988765432 23332 55568999998888776544332222 233332
Q ss_pred CCCCCcEEEEeecCCceE---EEEEEcCCccEEEEEe
Q 004690 270 ADQSNDICLYHEKDDIYS---LGLQASESKKFLFIAS 303 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~~---~~~~~S~Dg~~l~~~~ 303 (736)
.+- ..+-+- +.+. ..+.|.+||+.|++.-
T Consensus 149 ~~f---qrvgE~--~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 149 EGF---QRVGEF--STHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred ccc---ceeccc--ccCCcCcceeEEecCCcEEEEeC
Confidence 221 111111 1111 2467899999988754
No 369
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=93.01 E-value=9.7 Score=44.22 Aligned_cols=207 Identities=16% Similarity=0.154 Sum_probs=104.3
Q ss_pred EEEeeEEECCCCCEEEEEE----------------------eCCCCcEEEEEEEECCCCCeecccccCc-cceeEEeeCC
Q 004690 191 YSVGCFQVSPDNKLVAYAE----------------------DTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE 247 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~----------------------~~~G~e~~~l~v~dl~tg~~~~~~~~~~-~~~~~WspDg 247 (736)
..+....|||+|+.+++.. +..|.+..+++++|.++ .......... ...+.|.+++
T Consensus 101 ~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~ 179 (620)
T COG1506 101 FGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRLPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFATDGDG 179 (620)
T ss_pred cccccceeCCCCCeEEEEecccccccCCceeeeecccceeecCCCCcccceEEEccCc-ccccccCCCCceeeeeeCCCC
Confidence 3466778999999998831 11122466777777776 2222122222 3335555556
Q ss_pred -eEEEEEeCCCCCC--ceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcc-----eeEEEEEeCCCC
Q 004690 248 -ALVYITMDEILRP--DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI-----TRFVFYLDVSKP 319 (736)
Q Consensus 248 -~l~y~~~~~~~~~--~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~-----~~~l~~~dl~~~ 319 (736)
.++.+..+....+ ..++.....++ ...... ........+.+.+||+.+++...... ...+++.+...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (620)
T COG1506 180 RLVASIRLDDDADPWVTNLYVLIEGNG---ELESLT-PGEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELG 255 (620)
T ss_pred ceeEEeeeccccCCceEeeEEEecCCC---ceEEEc-CCCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEecccc
Confidence 3444444332111 12222222222 222222 22233456778999998888775432 245666663333
Q ss_pred CceEE-eeccc--cce-eEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEE
Q 004690 320 EELRV-LTPRV--VGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYER 395 (736)
Q Consensus 320 ~~~~~-l~~~~--~~~-~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~ 395 (736)
+ ... +.... .+. .....-+++.++|.+... .....++..+..+. ...+.. .+...+.+++.+++.+++...
T Consensus 256 ~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~l~~~~~~~~--~~~~~~-~~~~~v~~f~~~~~~~~~~~s 330 (620)
T COG1506 256 E-VDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDG-GGSSPLFRVDDLGG--GVEGLS-GDDGGVPGFDVDGRKLALAYS 330 (620)
T ss_pred c-cceeeccCCcccCcHHhccccCCCcEEEEEecC-CCceEEEEEeccCC--ceeeec-CCCceEEEEeeCCCEEEEEec
Confidence 3 222 11110 110 111224566777777764 23556666654331 222222 233457788887788887777
Q ss_pred eCC-eeEEEEEEc
Q 004690 396 EGG-LQKITTYRL 407 (736)
Q Consensus 396 ~~g-~~~l~v~~l 407 (736)
... .+++++++.
T Consensus 331 ~~~~p~~i~~~~~ 343 (620)
T COG1506 331 SPTEPPEIYLYDR 343 (620)
T ss_pred CCCCccceEEEcC
Confidence 655 456766654
No 370
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=92.95 E-value=9.8 Score=40.63 Aligned_cols=58 Identities=10% Similarity=0.188 Sum_probs=40.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeCCeEEEEEeCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITMDE 256 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspDg~l~y~~~~~ 256 (736)
+....-+|+|.+|+- |.+.-+||+|.+.+|..+.. +.. ...-+.|+.||..+++...+
T Consensus 84 v~al~s~n~G~~l~a-----g~i~g~lYlWelssG~LL~v-~~aHYQ~ITcL~fs~dgs~iiTgskD 144 (476)
T KOG0646|consen 84 VHALASSNLGYFLLA-----GTISGNLYLWELSSGILLNV-LSAHYQSITCLKFSDDGSHIITGSKD 144 (476)
T ss_pred eeeeecCCCceEEEe-----ecccCcEEEEEeccccHHHH-HHhhccceeEEEEeCCCcEEEecCCC
Confidence 556677999999873 33455799999999997652 221 13447899999777776544
No 371
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=92.95 E-value=0.27 Score=52.18 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=59.5
Q ss_pred EEEEecCCCCcCCCCCCchhHHHHHHCCcE---EEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 518 LLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
.++++||.... ...|......+...|+. +..+++.+....... ....+-+.+-++.+..... .
T Consensus 61 pivlVhG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~ql~~~V~~~l~~~g--a 126 (336)
T COG1075 61 PIVLVHGLGGG--YGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSL----------AVRGEQLFAYVDEVLAKTG--A 126 (336)
T ss_pred eEEEEccCcCC--cchhhhhhhhhcchHHHhcccccccccccCCCccc----------cccHHHHHHHHHHHHhhcC--C
Confidence 46788996222 22355555556666777 777777654211111 1112333344444433332 3
Q ss_pred CcEEEEEeChHHHHHHHHHHhCC--CceeEEEEcCC
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRP--DLFKAAVAAVP 628 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p--~~~~a~v~~~p 628 (736)
.+|.++||||||.++-.++...+ ..++.++...+
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 78999999999999998888877 67888877665
No 372
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=92.93 E-value=5 Score=42.00 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=63.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc--cCccceeEEeeCC-eEEEEEeCCCCCCc------eE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRPD------KA 263 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~~------~v 263 (736)
+-...||||+.++.+..- ...++++|+..|.....-. .....+++|-|-+ .+.-...+...+-. .+
T Consensus 126 iydL~Ws~d~~~l~s~s~-----dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~ 200 (434)
T KOG1009|consen 126 IYDLAWSPDSNFLVSGSV-----DNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVI 200 (434)
T ss_pred hhhhhccCCCceeeeeec-----cceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeee
Confidence 456789999999987653 4679999999999876422 2235568998888 45544444322211 11
Q ss_pred EEEE-----cCC---CCCCcEEEEee-cCCceEEEEEEcCCccEEEEEe
Q 004690 264 WLHK-----LEA---DQSNDICLYHE-KDDIYSLGLQASESKKFLFIAS 303 (736)
Q Consensus 264 ~~~~-----l~t---~~~~~~~~~~~-~~~~~~~~~~~S~Dg~~l~~~~ 303 (736)
+++. .+. .+.....+|.. .-+.|+-..+|||||..++.-+
T Consensus 201 ~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 201 KRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred eeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 2221 111 11122344532 2345677789999999877544
No 373
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=92.86 E-value=3.7 Score=46.21 Aligned_cols=156 Identities=12% Similarity=0.102 Sum_probs=82.4
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCe-eccc-c--cCccceeEEeeCCeEEEEEeCCCCCCceEEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKP-L--VGVTASVEWAGNEALVYITMDEILRPDKAWL 265 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~-~~~~-~--~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~ 265 (736)
++.-+.++||++|+.|+-.. | ..|-+.|+++++. .+.. . +.....+.-+||+..+|+... ...+..
T Consensus 19 iYtGG~~~~s~nG~~L~t~~---~---d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~r----s~llrv 88 (775)
T KOG0319|consen 19 IYTGGPVAWSSNGQHLYTAC---G---DRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASR----SQLLRV 88 (775)
T ss_pred eecCCceeECCCCCEEEEec---C---ceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeec----cceEEE
Confidence 45556689999999987554 3 3588899999998 3321 1 223456889999954444432 234556
Q ss_pred EEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEE--EeeeCCEE
Q 004690 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGNHF 343 (736)
Q Consensus 266 ~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~--~s~dg~~l 343 (736)
+.+.++ +-+..+......-.+..+++|.| .|+-+.... ..+-+.|...+. ..--.++.+|+... |.|+-.+.
T Consensus 89 ~~L~tg--k~irswKa~He~Pvi~ma~~~~g-~LlAtggaD--~~v~VWdi~~~~-~th~fkG~gGvVssl~F~~~~~~~ 162 (775)
T KOG0319|consen 89 WSLPTG--KLIRSWKAIHEAPVITMAFDPTG-TLLATGGAD--GRVKVWDIKNGY-CTHSFKGHGGVVSSLLFHPHWNRW 162 (775)
T ss_pred EEcccc--hHhHhHhhccCCCeEEEEEcCCC-ceEEecccc--ceEEEEEeeCCE-EEEEecCCCceEEEEEeCCccchh
Confidence 677666 22222221111122345678888 333322222 334555665544 22222343454433 44443332
Q ss_pred EEEEcCCCCCCcEEEEEeCCC
Q 004690 344 FITRRSDELFNSELLACPVDN 364 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~~~~~ 364 (736)
.+.+. +++..+.+.++..
T Consensus 163 lL~sg---~~D~~v~vwnl~~ 180 (775)
T KOG0319|consen 163 LLASG---ATDGTVRVWNLND 180 (775)
T ss_pred heeec---CCCceEEEEEccc
Confidence 22222 3456777777764
No 374
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=92.78 E-value=0.71 Score=48.08 Aligned_cols=99 Identities=15% Similarity=0.037 Sum_probs=66.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCc-----cceeEEeeCC-eEEEEEeCCCCCCceEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-----TASVEWAGNE-ALVYITMDEILRPDKAW 264 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~-----~~~~~WspDg-~l~y~~~~~~~~~~~v~ 264 (736)
.+.+..+|+||..|.-... .-++-++|+.+.++... ..++. .+.+.||||| .++--+.+. .||
T Consensus 343 ~vtSl~ls~~g~~lLsssR-----Ddtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dg-----sv~ 412 (459)
T KOG0288|consen 343 RVTSLDLSMDGLELLSSSR-----DDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADG-----SVY 412 (459)
T ss_pred ceeeEeeccCCeEEeeecC-----CCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCC-----cEE
Confidence 5778899999998875532 24689999999887653 22221 4568999999 454433332 489
Q ss_pred EEEcCCCCCCcEEEEeecCCc-eEEEEEEcCCccEEEEE
Q 004690 265 LHKLEADQSNDICLYHEKDDI-YSLGLQASESKKFLFIA 302 (736)
Q Consensus 265 ~~~l~t~~~~~~~~~~~~~~~-~~~~~~~S~Dg~~l~~~ 302 (736)
++++.++. -+.+....... -..+++|+|.|++|+-.
T Consensus 413 iW~v~tgK--lE~~l~~s~s~~aI~s~~W~~sG~~Llsa 449 (459)
T KOG0288|consen 413 IWSVFTGK--LEKVLSLSTSNAAITSLSWNPSGSGLLSA 449 (459)
T ss_pred EEEccCce--EEEEeccCCCCcceEEEEEcCCCchhhcc
Confidence 99998873 33444433222 34578999999987643
No 375
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=92.66 E-value=2.2 Score=46.06 Aligned_cols=88 Identities=11% Similarity=0.034 Sum_probs=55.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC-ccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~-~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
+-...|||..+.|+ .|+|.+...|||.-+.....-..+. ...+++|.|| ++|.+..-.. .+
T Consensus 189 iL~~~W~~~s~lI~-----sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~nt------~R------ 250 (737)
T KOG1524|consen 189 VLSLSWSTQSNIIA-----SGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLLWSYNT------AR------ 250 (737)
T ss_pred EEEeecCcccccee-----ecCCceeEEeecccCcccccCChhccceeeeeeccc-cceeeeeeee------ee------
Confidence 44568899988887 5778899999998765443322222 3566999999 5544332111 11
Q ss_pred CCCcEEEEeecCCceEEEEEEcCCccEEEEEecC
Q 004690 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASES 305 (736)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~ 305 (736)
++.++..-...++||+||..++.....
T Consensus 251 -------~~~p~~GSifnlsWS~DGTQ~a~gt~~ 277 (737)
T KOG1524|consen 251 -------FSSPRVGSIFNLSWSADGTQATCGTST 277 (737)
T ss_pred -------ecCCCccceEEEEEcCCCceeeccccC
Confidence 222333334478999999998775543
No 376
>PLN02209 serine carboxypeptidase
Probab=92.64 E-value=0.53 Score=51.62 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=72.4
Q ss_pred EEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCC-------c--------------hhHHHHHHCCcE
Q 004690 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-------N--------------SSRLSLLDRGFI 547 (736)
Q Consensus 489 ~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~-------~--------------~~~~~l~~~G~~ 547 (736)
+.+....|..+..+++.... .....|+||++-||+|.+..... . ..-..|.+. ..
T Consensus 44 ~~v~~~~~~~lf~~f~es~~---~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-an 119 (437)
T PLN02209 44 IGIGEEENVQFFYYFIKSDK---NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-AN 119 (437)
T ss_pred EEecCCCCeEEEEEEEecCC---CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-Cc
Confidence 33433345556555444332 23457999999999987532110 0 000123332 45
Q ss_pred EEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHH-HHcCCCCCCcEEEEEeChHHHHHHHHHH----hC-----C
Q 004690 548 FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL-IKNCYCTKEKLCIEGRSAGGLLIGAVLN----MR-----P 617 (736)
Q Consensus 548 v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~ri~~~G~S~GG~la~~~~~----~~-----p 617 (736)
++.+|.+-+.|+...-.... ......+.+|+..++... ...+......+.|.|.|+||..+-.+|. .+ +
T Consensus 120 llfiDqPvGtGfSy~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIE-RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred EEEecCCCCCCccCCCCCCC-ccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 77778665544432111101 111112335555544433 3333334468999999999985544432 22 1
Q ss_pred -CceeEEEEcCCccch
Q 004690 618 -DLFKAAVAAVPFVDV 632 (736)
Q Consensus 618 -~~~~a~v~~~p~~d~ 632 (736)
=.+++++...|++|.
T Consensus 199 ~inl~Gi~igng~td~ 214 (437)
T PLN02209 199 PINLQGYVLGNPITHI 214 (437)
T ss_pred ceeeeeEEecCcccCh
Confidence 146899999998874
No 377
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=92.59 E-value=1.1 Score=50.64 Aligned_cols=122 Identities=13% Similarity=0.103 Sum_probs=75.9
Q ss_pred EeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cc---------cCccceeEEeeCC
Q 004690 178 ILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL---------VGVTASVEWAGNE 247 (736)
Q Consensus 178 llD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~---------~~~~~~~~WspDg 247 (736)
+.|.|.+.+ -|.++.++|||+....+.-. | .+++++..+-+.... .+ .....++.+.|-.
T Consensus 444 Vv~W~Dl~~-----lITAvcy~PdGk~avIGt~~-G----~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~ 513 (712)
T KOG0283|consen 444 VVDWNDLRD-----LITAVCYSPDGKGAVIGTFN-G----YCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGD 513 (712)
T ss_pred eEeehhhhh-----hheeEEeccCCceEEEEEec-c----EEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCC
Confidence 356666642 47889999999998876542 3 366666666554421 11 1124568888776
Q ss_pred --eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeec-CCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCC
Q 004690 248 --ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (736)
Q Consensus 248 --~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~-~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~ 319 (736)
.++.++.|. +|.++++.+. +-+..|.+. +..-....+++.||++|+..+ +.+.||+.+.+..
T Consensus 514 ~~~vLVTSnDS-----rIRI~d~~~~--~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s---eDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 514 PDEVLVTSNDS-----RIRIYDGRDK--DLVHKFKGFRNTSSQISASFSSDGKHIVSAS---EDSWVYIWKNDSF 578 (712)
T ss_pred CCeEEEecCCC-----ceEEEeccch--hhhhhhcccccCCcceeeeEccCCCEEEEee---cCceEEEEeCCCC
Confidence 588887764 4777776433 233344332 122234567899999998776 4466888877543
No 378
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=92.50 E-value=3.3 Score=45.95 Aligned_cols=53 Identities=21% Similarity=0.252 Sum_probs=39.7
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccccc---CccceeEEeeCCeE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEAL 249 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~---~~~~~~~WspDg~l 249 (736)
+..+....+-|||+.|....+ ..++++|+..|.... ++. +....++||.||..
T Consensus 12 ~hci~d~afkPDGsqL~lAAg------~rlliyD~ndG~llq-tLKgHKDtVycVAys~dGkr 67 (1081)
T KOG1538|consen 12 EHCINDIAFKPDGTQLILAAG------SRLLVYDTSDGTLLQ-PLKGHKDTVYCVAYAKDGKR 67 (1081)
T ss_pred ccchheeEECCCCceEEEecC------CEEEEEeCCCccccc-ccccccceEEEEEEccCCce
Confidence 346778899999999987653 469999999887665 333 34556899999943
No 379
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=92.48 E-value=4.9 Score=41.74 Aligned_cols=116 Identities=14% Similarity=0.092 Sum_probs=72.7
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
...+..+.|++ .-.+|+... .-+|.+||+++|..... ........++.+|...++.....+ + .+.+|+-
T Consensus 260 t~~Vs~V~w~d--~~v~yS~Sw----DHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssd--r--~irl~DP 329 (423)
T KOG0313|consen 260 TEPVSSVVWSD--ATVIYSVSW----DHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSD--R--HIRLWDP 329 (423)
T ss_pred ccceeeEEEcC--CCceEeecc----cceEEEEEeecccceeeeecCcceeEeecccccceeeecCCC--C--ceeecCC
Confidence 44688999998 456777653 35899999999886643 223335557888877655544322 2 3555665
Q ss_pred CCCCCCcEEEEe-ecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeC
Q 004690 269 EADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 316 (736)
Q Consensus 269 ~t~~~~~~~~~~-~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl 316 (736)
.++... .+... -....+.-.+.|+|-..+++++.+..+...+|-+..
T Consensus 330 R~~~gs-~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS 377 (423)
T KOG0313|consen 330 RTGDGS-VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS 377 (423)
T ss_pred CCCCCc-eeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEecc
Confidence 554322 22221 122335556889999999999887766666665443
No 380
>PRK13613 lipoprotein LpqB; Provisional
Probab=92.42 E-value=11 Score=43.29 Aligned_cols=165 Identities=18% Similarity=0.194 Sum_probs=88.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCe----eccccc-CccceeEEeeCCeEEEEEeCCCCCCceEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP----VGKPLV-GVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~----~~~~~~-~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~ 266 (736)
.+..+.+|+||+.+|+... . ...|++-.+..+.. ....+. .....++|.++|.++-+ ..+...+.-++..
T Consensus 364 ~~~s~avS~~g~~~A~v~~-~---~~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g~vWtv-d~~~~~~~vl~v~ 438 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISA-D---GDSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRGDLWVV-DRDPADPRLLWLL 438 (599)
T ss_pred CccceEEcCCCceEEEEcC-C---CcEEEEeccCCCCccccccceeeccCcccCCcCcCCCCEEEe-cCCCCCceEEEEE
Confidence 4667899999999998843 2 25788877755443 111122 23456899888855433 2212222223333
Q ss_pred EcCCCCCCcEEEEe-ecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeC---CCCC----ceEEeeccccce-eEEEe
Q 004690 267 KLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV---SKPE----ELRVLTPRVVGV-DTAAS 337 (736)
Q Consensus 267 ~l~t~~~~~~~~~~-~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl---~~~~----~~~~l~~~~~~~-~~~~s 337 (736)
. +++. ...+-. .-+..-...+..|+||-.+++.....+...|++.-+ .++. .++.+......+ ...|.
T Consensus 439 ~-~~G~--~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~ 515 (599)
T PRK13613 439 Q-GDGE--PVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSWA 515 (599)
T ss_pred c-CCCc--EEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCCccceeEEc
Confidence 2 2331 211111 112223456788999999988876555555665332 2232 122333322222 23476
Q ss_pred eeCCEEEEEEcCCCCCCcEEEEEeCCCCC
Q 004690 338 HRGNHFFITRRSDELFNSELLACPVDNTS 366 (736)
Q Consensus 338 ~dg~~l~~~t~~~~~~~~~l~~~~~~~~~ 366 (736)
.+ ..|+++.... ..+..++.+.+++..
T Consensus 516 ~~-~sL~Vlg~~~-~~~~~v~~v~vdG~~ 542 (599)
T PRK13613 516 GD-SQLVVLGREE-GGVQQARYVQVDGST 542 (599)
T ss_pred CC-CEEEEEeccC-CCCcceEEEecCCcC
Confidence 54 4576654333 235678888888743
No 381
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=92.09 E-value=15 Score=37.18 Aligned_cols=36 Identities=22% Similarity=0.054 Sum_probs=27.5
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG 231 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~ 231 (736)
-.+....|++||+.|.-..+ ..+++.||+++|+...
T Consensus 91 gAVM~l~~~~d~s~i~S~gt-----Dk~v~~wD~~tG~~~r 126 (338)
T KOG0265|consen 91 GAVMELHGMRDGSHILSCGT-----DKTVRGWDAETGKRIR 126 (338)
T ss_pred ceeEeeeeccCCCEEEEecC-----CceEEEEecccceeee
Confidence 35788899999998864322 3579999999998653
No 382
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.96 E-value=1.3 Score=52.06 Aligned_cols=176 Identities=11% Similarity=0.115 Sum_probs=104.2
Q ss_pred CCceEEeecchhcCCC----------CeEEEeeEEECCCCC-EEEEEEeCCCCcEEEEEEEECCCCCeeccc-----ccC
Q 004690 173 PPEHLILDENVKAEGR----------GFYSVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVGKP-----LVG 236 (736)
Q Consensus 173 ~~~~vllD~n~~~~~~----------~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~l~v~dl~tg~~~~~~-----~~~ 236 (736)
.+-.+|.|++++.++. -.-.|.+..|+|.+. .|| .|...-+|+|||+..-+. +.+ ..+
T Consensus 89 dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLA-----SGa~~geI~iWDlnn~~t-P~~~~~~~~~~ 162 (1049)
T KOG0307|consen 89 DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLA-----SGADDGEILIWDLNKPET-PFTPGSQAPPS 162 (1049)
T ss_pred CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceee-----ccCCCCcEEEeccCCcCC-CCCCCCCCCcc
Confidence 3557778887762111 123477789999877 777 344456899999986322 111 122
Q ss_pred ccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCce-EEEEEEcCCccE-EEEEecCcceeEEEE
Q 004690 237 VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKF-LFIASESKITRFVFY 313 (736)
Q Consensus 237 ~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~-~~~~~~S~Dg~~-l~~~~~~~~~~~l~~ 313 (736)
-...++|...- +|+-..... + +...+||... +.++-+.+...+. .-.+.|.||+.. |++.+.+....-|-+
T Consensus 163 eI~~lsWNrkvqhILAS~s~s-g---~~~iWDlr~~--~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~Pviql 236 (1049)
T KOG0307|consen 163 EIKCLSWNRKVSHILASGSPS-G---RAVIWDLRKK--KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQL 236 (1049)
T ss_pred cceEeccchhhhHHhhccCCC-C---CceeccccCC--CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEe
Confidence 23447886555 555443322 1 3455677654 3444444433322 346889999864 555555554455556
Q ss_pred EeCCCCC-ceEEeecccccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004690 314 LDVSKPE-ELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 364 (736)
Q Consensus 314 ~dl~~~~-~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~ 364 (736)
.|+.-.. +.+.+..+..|+. ..|.+.+.++++.+.++ .+++..+.++
T Consensus 237 WDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD----~~ii~wN~~t 285 (1049)
T KOG0307|consen 237 WDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKD----NRIICWNPNT 285 (1049)
T ss_pred ecccccCCchhhhcccccceeeeccCCCCchhhhcccCC----CCeeEecCCC
Confidence 6654433 3556666666765 35888888888888776 4677776655
No 383
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=91.89 E-value=2.9 Score=42.12 Aligned_cols=133 Identities=11% Similarity=0.080 Sum_probs=77.7
Q ss_pred CceEEeecchhcCCC------CeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-----cccCccceeE
Q 004690 174 PEHLILDENVKAEGR------GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PLVGVTASVE 242 (736)
Q Consensus 174 ~~~vllD~n~~~~~~------~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-----~~~~~~~~~~ 242 (736)
.-..|||-.+-+... +...+...++.|.|.+|+...+ ...++++|++|-+-..- ...+....+.
T Consensus 194 ~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTd-----Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~ 268 (430)
T KOG0640|consen 194 NTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTD-----HPTLRLYDVNTYQCFVSANPDDQHTGAITQVR 268 (430)
T ss_pred CeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecC-----CCceeEEeccceeEeeecCcccccccceeEEE
Confidence 345677754432111 2456888999999999997655 56799999998664321 1223355688
Q ss_pred EeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEee-cCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 243 WAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 243 WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~-~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
+|+.|.+|.+...+. .|.+++--++ .=+.-+.+ .+..-..+..++++||||+-+. ..+-++++.+.++.
T Consensus 269 Ys~t~~lYvTaSkDG----~IklwDGVS~--rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG---~DS~vkLWEi~t~R 338 (430)
T KOG0640|consen 269 YSSTGSLYVTASKDG----AIKLWDGVSN--RCVRTIGNAHGGSEVCSAVFTKNGKYILSSG---KDSTVKLWEISTGR 338 (430)
T ss_pred ecCCccEEEEeccCC----cEEeeccccH--HHHHHHHhhcCCceeeeEEEccCCeEEeecC---CcceeeeeeecCCc
Confidence 999998888876543 2334331111 11111111 2233345677999999986432 23345556666654
No 384
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=91.88 E-value=2.3 Score=46.48 Aligned_cols=140 Identities=16% Similarity=0.057 Sum_probs=78.5
Q ss_pred EEEeCCCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHH----------------HHHHCCcEEEEEc
Q 004690 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRL----------------SLLDRGFIFAIAQ 552 (736)
Q Consensus 489 ~~~~s~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~----------------~l~~~G~~v~~~d 552 (736)
+.+....|..+..+++..... ....|+||++-||+|-+...+...+.- .|.+ =..++..|
T Consensus 49 v~v~~~~~~~LFYwf~eS~~~---P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk-~aNiLfLd 124 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESENN---PETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNK-EANILFLD 124 (454)
T ss_pred EECCCCCCceEEEEEEEccCC---CCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccc-cccEEEEe
Confidence 344444677888776654432 345799999999998653221111000 1111 12356666
Q ss_pred ccCCCCCChhhhhccccccCcChHHHHH-HHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHH----HhC-----C-Ccee
Q 004690 553 IRGGGELGRQWYENGKFLKKKNTFTDFI-ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVL----NMR-----P-DLFK 621 (736)
Q Consensus 553 ~RG~g~~g~~~~~~~~~~~~~~~~~D~~-~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~----~~~-----p-~~~~ 621 (736)
.+-+-|+...-...........+.+|.. ...+|+.+.+.-..+...|.|.|++|..+-++| ..+ | -.++
T Consensus 125 ~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLk 204 (454)
T KOG1282|consen 125 QPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLK 204 (454)
T ss_pred cCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccce
Confidence 6644433221111111112222334544 456777776666668899999999997654444 322 2 2479
Q ss_pred EEEEcCCccch
Q 004690 622 AAVAAVPFVDV 632 (736)
Q Consensus 622 a~v~~~p~~d~ 632 (736)
+++...|++|.
T Consensus 205 G~~IGNg~td~ 215 (454)
T KOG1282|consen 205 GYAIGNGLTDP 215 (454)
T ss_pred EEEecCcccCc
Confidence 99999998874
No 385
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=91.87 E-value=0.32 Score=44.08 Aligned_cols=53 Identities=19% Similarity=0.255 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh----C---CCceeEEEEcCCcc
Q 004690 576 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----R---PDLFKAAVAAVPFV 630 (736)
Q Consensus 576 ~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~----~---p~~~~a~v~~~p~~ 630 (736)
.+.+...++.+.++.. +.+|.+.|||+||.+|..++.. . +..+.++...+|.+
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 3456666666666543 3799999999999998777653 1 13466666666644
No 386
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=91.83 E-value=11 Score=41.07 Aligned_cols=121 Identities=18% Similarity=0.189 Sum_probs=71.4
Q ss_pred CCCeEEeEEEEEecCCccCCCCCcEEEEecCCCCcCCCCCCchhHHHHHHCCcE-EEEEcccCCCCCChhhhhccccccC
Q 004690 494 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFI-FAIAQIRGGGELGRQWYENGKFLKK 572 (736)
Q Consensus 494 ~dG~~i~~~~~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~-v~~~d~RG~g~~g~~~~~~~~~~~~ 572 (736)
..+.++-. .+.|-+. +.|+.||+-| +.. ..+|... -++-..|.- .++-|.|--|| .|+-... ..
T Consensus 273 ~~reEi~y-YFnPGD~-----KPPL~VYFSG-yR~--aEGFEgy-~MMk~Lg~PfLL~~DpRleGG---aFYlGs~-ey- 337 (511)
T TIGR03712 273 SKRQEFIY-YFNPGDF-----KPPLNVYFSG-YRP--AEGFEGY-FMMKRLGAPFLLIGDPRLEGG---AFYLGSD-EY- 337 (511)
T ss_pred CCCCeeEE-ecCCcCC-----CCCeEEeecc-Ccc--cCcchhH-HHHHhcCCCeEEeeccccccc---eeeeCcH-HH-
Confidence 34555533 3556554 5699999988 332 2224322 123334554 44558886554 2331110 00
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEcCCccchhhh
Q 004690 573 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTT 635 (736)
Q Consensus 573 ~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~-~p~~~~a~v~~~p~~d~~~~ 635 (736)
-+-++..++.-.+.-..+.+.+.+.|-|||-+-|+..++. .| +|+|..-|++++-+.
T Consensus 338 ---E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P---~AIiVgKPL~NLGti 395 (511)
T TIGR03712 338 ---EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSP---HAIIVGKPLVNLGTI 395 (511)
T ss_pred ---HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCC---ceEEEcCcccchhhh
Confidence 0234444443333323577899999999999999988876 34 799999999987543
No 387
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=91.79 E-value=14 Score=38.50 Aligned_cols=144 Identities=8% Similarity=0.084 Sum_probs=76.3
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeeccc--ccC---ccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~--~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
+..||| +.++.-..|+=...|+++...+|.-..+. +.+ ..-.+.|||.. .++++..-+. .+.++++
T Consensus 216 ~LdWSp----~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dg----sIrIWDi 287 (440)
T KOG0302|consen 216 GLDWSP----IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDG----SIRIWDI 287 (440)
T ss_pred eeeccc----ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCc----eEEEEEe
Confidence 468999 23333334665678999999888765432 222 23458999998 6777654221 2556666
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCC--CCceE-Eeecccccee-EEEeeeCCEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK--PEELR-VLTPRVVGVD-TAASHRGNHFF 344 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~--~~~~~-~l~~~~~~~~-~~~s~dg~~l~ 344 (736)
..++.+..+.....+.... -++|+.+-.. +.+..+.+.-. +.|+.. ...+. .+.-...-+. ..|.|.....+
T Consensus 288 Rs~~~~~~~~~kAh~sDVN-VISWnr~~~l-LasG~DdGt~~--iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~i 363 (440)
T KOG0302|consen 288 RSGPKKAAVSTKAHNSDVN-VISWNRREPL-LASGGDDGTLS--IWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVI 363 (440)
T ss_pred cCCCccceeEeeccCCcee-eEEccCCcce-eeecCCCceEE--EEEhhhccCCCcceeEEeccCCeeEEEeccccCceE
Confidence 6665444444432222222 3678777663 33333334434 445443 22122 2222222222 24888777776
Q ss_pred EEEcCC
Q 004690 345 ITRRSD 350 (736)
Q Consensus 345 ~~t~~~ 350 (736)
.++..+
T Consensus 364 aasg~D 369 (440)
T KOG0302|consen 364 AASGED 369 (440)
T ss_pred EeccCC
Confidence 666554
No 388
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=91.74 E-value=0.49 Score=36.22 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=28.4
Q ss_pred CCceEEEEEEeCCCCeEEeEEEEEecC-CccCCCCCcEEEEecCCCCcCCC
Q 004690 482 NNYFTERKWASASDGTQIPICIVYRKN-LVKLDGSDPLLLYGYGSYEICND 531 (736)
Q Consensus 482 ~~~~~~~~~~~s~dG~~i~~~~~~p~~-~~~~~~~~P~vl~~hGg~~~~~~ 531 (736)
.+|.+|...+++.||--+.++-+.++. .....++.|.|++.||-..++..
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 467889999999999988887666555 11245678999999997766544
No 389
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=91.70 E-value=15 Score=36.37 Aligned_cols=185 Identities=13% Similarity=0.126 Sum_probs=90.9
Q ss_pred CCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEE
Q 004690 199 SPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDIC 277 (736)
Q Consensus 199 SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~ 277 (736)
.++++++... +.. ..|+.+|..+|+.+-. .+++......-..++.+++...+ ..++.+++.++.. .-
T Consensus 33 ~~~~~~v~~~-~~~----~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~-----~~l~~~d~~tG~~--~W 100 (238)
T PF13360_consen 33 VPDGGRVYVA-SGD----GNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSD-----GSLYALDAKTGKV--LW 100 (238)
T ss_dssp EEETTEEEEE-ETT----SEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEETT-----SEEEEEETTTSCE--EE
T ss_pred EEeCCEEEEE-cCC----CEEEEEECCCCCEEEEeeccccccceeeecccccccccce-----eeeEecccCCcce--ee
Confidence 4456665444 322 4799999999987643 33333222223334467655522 2688888777632 11
Q ss_pred E-Eeec--CCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccc---------eeEEEeeeCCEEE
Q 004690 278 L-YHEK--DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG---------VDTAASHRGNHFF 344 (736)
Q Consensus 278 ~-~~~~--~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~---------~~~~~s~dg~~l~ 344 (736)
- .... ............++..+++... ...|+.+|+.+|+ .+..-.....+ ......-.++.+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (238)
T PF13360_consen 101 SIYLTSSPPAGVRSSSSPAVDGDRLYVGTS---SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVY 177 (238)
T ss_dssp EEEE-SSCTCSTB--SEEEEETTEEEEEET---CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEE
T ss_pred eeccccccccccccccCceEecCEEEEEec---cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEE
Confidence 1 1111 1111111222333666666543 4568889988887 22221121111 1112222344555
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004690 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 345 ~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
+.+... .++.+|+.+. ...|..+.. . ....+...++.+++.. .++ .++.+++..
T Consensus 178 ~~~~~g-----~~~~~d~~tg-~~~w~~~~~-~-~~~~~~~~~~~l~~~~-~~~--~l~~~d~~t 231 (238)
T PF13360_consen 178 VSSGDG-----RVVAVDLATG-EKLWSKPIS-G-IYSLPSVDGGTLYVTS-SDG--RLYALDLKT 231 (238)
T ss_dssp EECCTS-----SEEEEETTTT-EEEEEECSS---ECECEECCCTEEEEEE-TTT--EEEEEETTT
T ss_pred EEcCCC-----eEEEEECCCC-CEEEEecCC-C-ccCCceeeCCEEEEEe-CCC--EEEEEECCC
Confidence 554332 2777788763 334633321 1 2222556666776665 443 477888763
No 390
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=91.69 E-value=2.1 Score=45.86 Aligned_cols=94 Identities=17% Similarity=0.144 Sum_probs=58.1
Q ss_pred EEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCc-cceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCC
Q 004690 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQS 273 (736)
Q Consensus 196 ~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~-~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~ 273 (736)
..+.|.| .||.... .-.+.|+|.++...+.+..++. .+.+.++||| .|+.-+.|. .||++.+..+..
T Consensus 413 ~~fhpsg-~va~Gt~-----~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~-----~iyiy~Vs~~g~ 481 (626)
T KOG2106|consen 413 ADFHPSG-VVAVGTA-----TGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDN-----HIYIYRVSANGR 481 (626)
T ss_pred eeccCcc-eEEEeec-----cceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCC-----eEEEEEECCCCc
Confidence 3455555 4443332 2367889999876665533333 5668999999 677665543 477777765532
Q ss_pred CcEEEEeecCCceEEEEEEcCCccEEEE
Q 004690 274 NDICLYHEKDDIYSLGLQASESKKFLFI 301 (736)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~S~Dg~~l~~ 301 (736)
....+..-...+...+.||+|+++|.-
T Consensus 482 -~y~r~~k~~gs~ithLDwS~Ds~~~~~ 508 (626)
T KOG2106|consen 482 -KYSRVGKCSGSPITHLDWSSDSQFLVS 508 (626)
T ss_pred -EEEEeeeecCceeEEeeecCCCceEEe
Confidence 222332222366677899999998753
No 391
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=91.49 E-value=13 Score=38.77 Aligned_cols=190 Identities=17% Similarity=0.137 Sum_probs=104.8
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCC-----------------------eecc-cccC---ccceeEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT-----------------------PVGK-PLVG---VTASVEW 243 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~-----------------------~~~~-~~~~---~~~~~~W 243 (736)
..+..++..+||.+++- |+-...|.+|+.++.+ ..+. ++.+ ..+.+.|
T Consensus 194 ~~V~sVsv~~sgtr~~S-----gS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w 268 (423)
T KOG0313|consen 194 RSVDSVSVDSSGTRFCS-----GSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW 268 (423)
T ss_pred cceeEEEecCCCCeEEe-----ecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEE
Confidence 45788888999999873 4445678888732211 0111 2333 3567899
Q ss_pred eeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ce
Q 004690 244 AGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-EL 322 (736)
Q Consensus 244 spDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~ 322 (736)
++ ...+|...- .+.|..+++.++...+. +. .+ .-+..+..+|..+.|+-.+.+ ..|.+.|..++. ..
T Consensus 269 ~d-~~v~yS~Sw----DHTIk~WDletg~~~~~-~~-~~--ksl~~i~~~~~~~Ll~~gssd---r~irl~DPR~~~gs~ 336 (423)
T KOG0313|consen 269 SD-ATVIYSVSW----DHTIKVWDLETGGLKST-LT-TN--KSLNCISYSPLSKLLASGSSD---RHIRLWDPRTGDGSV 336 (423)
T ss_pred cC-CCceEeecc----cceEEEEEeecccceee-ee-cC--cceeEeecccccceeeecCCC---CceeecCCCCCCCce
Confidence 87 445565432 23578888888743222 22 12 223467788877665543322 345667776654 12
Q ss_pred --EEeecccccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceee-EecCCCCceeeeEEEeCCEEEEEEEeCC
Q 004690 323 --RVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGG 398 (736)
Q Consensus 323 --~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~-l~~~~~~~~i~~~~~~~~~l~~~~~~~g 398 (736)
..+.....-+. ..|+|.....++....++ .+...|+......-- +..+ +-.+..+.|.+..+++....+.
T Consensus 337 v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~----t~klWDvRS~k~plydI~~h--~DKvl~vdW~~~~~IvSGGaD~ 410 (423)
T KOG0313|consen 337 VSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDN----TVKLWDVRSTKAPLYDIAGH--NDKVLSVDWNEGGLIVSGGADN 410 (423)
T ss_pred eEEeeecchhhhhheecCCCCceEEEEEecCC----eEEEEEeccCCCcceeeccC--CceEEEEeccCCceEEeccCcc
Confidence 23344444333 238887776666666552 344455544321112 3333 2346688888887776665444
Q ss_pred eeEEEEE
Q 004690 399 LQKITTY 405 (736)
Q Consensus 399 ~~~l~v~ 405 (736)
+|+++
T Consensus 411 --~l~i~ 415 (423)
T KOG0313|consen 411 --KLRIF 415 (423)
T ss_pred --eEEEe
Confidence 34444
No 392
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.05 E-value=0.34 Score=44.85 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC
Q 004690 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP 617 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p 617 (736)
..+...++....+ ....+|.++|||+||.+|..++....
T Consensus 12 ~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 12 NLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 3444444444332 23479999999999999988876643
No 393
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=91.00 E-value=13 Score=41.87 Aligned_cols=108 Identities=10% Similarity=0.157 Sum_probs=56.1
Q ss_pred EEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce---e--EEEeeeCCEEEEEEcCCCCCCcEEEEEeCC
Q 004690 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV---D--TAASHRGNHFFITRRSDELFNSELLACPVD 363 (736)
Q Consensus 289 ~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~---~--~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~ 363 (736)
+....|..++++....++ .|.+.+...++ .+...++..+. . ...+|.| +|+.+.-. +-.|..+|.-
T Consensus 601 Dm~Vdp~~k~v~t~cQDr---nirif~i~sgK-q~k~FKgs~~~eG~lIKv~lDPSg--iY~atScs---dktl~~~Df~ 671 (1080)
T KOG1408|consen 601 DMAVDPTSKLVVTVCQDR---NIRIFDIESGK-QVKSFKGSRDHEGDLIKVILDPSG--IYLATSCS---DKTLCFVDFV 671 (1080)
T ss_pred EeeeCCCcceEEEEeccc---ceEEEeccccc-eeeeecccccCCCceEEEEECCCc--cEEEEeec---CCceEEEEec
Confidence 455567777776655443 35677777776 44444433221 1 2345554 45554432 2347777765
Q ss_pred CCCceeeEecCCCCceeeeEEEeCCEE-EEEEEeCCeeEEEEEEcCC
Q 004690 364 NTSETTVLIPHRESVKLQDIQLFIDHL-AVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 364 ~~~~~~~l~~~~~~~~i~~~~~~~~~l-~~~~~~~g~~~l~v~~l~~ 409 (736)
+.+-....+.+.+ .+.++-+.+|.- ++...-+|. |+||.++.
T Consensus 672 sgEcvA~m~GHsE--~VTG~kF~nDCkHlISvsgDgC--IFvW~lp~ 714 (1080)
T KOG1408|consen 672 SGECVAQMTGHSE--AVTGVKFLNDCKHLISVSGDGC--IFVWKLPL 714 (1080)
T ss_pred cchhhhhhcCcch--heeeeeecccchhheeecCCce--EEEEECch
Confidence 5322222344443 345666666532 334555555 66777653
No 394
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=90.45 E-value=4.5 Score=40.49 Aligned_cols=113 Identities=11% Similarity=0.179 Sum_probs=69.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCee-cc-----ccc--CccceeEEee--CC-eEEEEEeCCCCCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GK-----PLV--GVTASVEWAG--NE-ALVYITMDEILRP 260 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~-~~-----~~~--~~~~~~~Wsp--Dg-~l~y~~~~~~~~~ 260 (736)
.+.-+.|-|+++++|-..+ ..|.+|+++.+..+ .. ..+ ..+.+-+||| || .++-+ .+.
T Consensus 125 ~i~cvew~Pns~klasm~d------n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~---- 193 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDD------NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDS---- 193 (370)
T ss_pred ceeeEEEcCCCCeeEEecc------CceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCC----
Confidence 4677899999999997763 46888998876542 21 111 1244579998 56 55543 333
Q ss_pred ceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 261 ~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
.++.+++.|.. ...-.+........++.+.|+.++++++..+.+.- .+.|....+
T Consensus 194 -tl~~~D~RT~~--~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyv--riWD~R~tk 248 (370)
T KOG1007|consen 194 -TLQFWDLRTMK--KNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYV--RIWDTRKTK 248 (370)
T ss_pred -cEEEEEccchh--hhcchhhhhcceeeeccCCCCceEEEEEcCCCccE--EEEeccCCC
Confidence 36777777642 11122222333455677899999998887765544 445655443
No 395
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=90.40 E-value=18 Score=34.91 Aligned_cols=208 Identities=15% Similarity=0.154 Sum_probs=97.0
Q ss_pred CceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECC--CCCeec----ccc-cCccceeEEeeC
Q 004690 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE--TGTPVG----KPL-VGVTASVEWAGN 246 (736)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~--tg~~~~----~~~-~~~~~~~~WspD 246 (736)
+..|++--|+-..| ++.-..|||+|.+||-. +....|.++... |.+.+. ... ++....++|..|
T Consensus 77 pp~v~~kr~khhkg----siyc~~ws~~geliatg-----sndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~ 147 (350)
T KOG0641|consen 77 PPSVLCKRNKHHKG----SIYCTAWSPCGELIATG-----SNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDD 147 (350)
T ss_pred CCeEEeeeccccCc----cEEEEEecCccCeEEec-----CCCceEEEEecccccccccCcceeeeecCCceeeeEEecC
Confidence 45677766665433 46667999999999944 334566666543 333221 111 223334566544
Q ss_pred C----eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCce
Q 004690 247 E----ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL 322 (736)
Q Consensus 247 g----~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~ 322 (736)
. .|+... .....++|..+-++++. ...+.+.......-..|+ | +++.+.+...+ |...|+.-...+
T Consensus 148 ~~s~~~il~s~---gagdc~iy~tdc~~g~~--~~a~sghtghilalyswn--~-~m~~sgsqdkt--irfwdlrv~~~v 217 (350)
T KOG0641|consen 148 PESGGAILASA---GAGDCKIYITDCGRGQG--FHALSGHTGHILALYSWN--G-AMFASGSQDKT--IRFWDLRVNSCV 217 (350)
T ss_pred CCcCceEEEec---CCCcceEEEeecCCCCc--ceeecCCcccEEEEEEec--C-cEEEccCCCce--EEEEeeecccee
Confidence 2 233322 23346788888887742 333333322222223343 2 34433222222 333333322112
Q ss_pred EEeec-c-cccee------EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEE
Q 004690 323 RVLTP-R-VVGVD------TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE 394 (736)
Q Consensus 323 ~~l~~-~-~~~~~------~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~ 394 (736)
..+-. . ..+.+ ..++|.|+.| .....+ ..-+.+|+.+....+...|+..++.-..|++...+++ ..
T Consensus 218 ~~l~~~~~~~glessavaav~vdpsgrll-~sg~~d----ssc~lydirg~r~iq~f~phsadir~vrfsp~a~yll-t~ 291 (350)
T KOG0641|consen 218 NTLDNDFHDGGLESSAVAAVAVDPSGRLL-ASGHAD----SSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLL-TC 291 (350)
T ss_pred eeccCcccCCCcccceeEEEEECCCccee-eeccCC----CceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEE-Ee
Confidence 22211 1 11211 1267777643 333332 3455556665434445677766655444444443443 33
Q ss_pred EeCCeeEEEEEEcC
Q 004690 395 REGGLQKITTYRLP 408 (736)
Q Consensus 395 ~~~g~~~l~v~~l~ 408 (736)
+.+. .|.+-++.
T Consensus 292 syd~--~ikltdlq 303 (350)
T KOG0641|consen 292 SYDM--KIKLTDLQ 303 (350)
T ss_pred cccc--eEEEeecc
Confidence 3332 35666665
No 396
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=89.94 E-value=11 Score=39.39 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=47.4
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec-ccccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~-~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
.++-+.|.|--.-++.+. |. .+++.+||+.||+.+- +.-++...+++|+-||+++.++..+ .+|..++..+
T Consensus 133 rVg~V~wHPtA~NVLlsa---g~-Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckD----KkvRv~dpr~ 204 (472)
T KOG0303|consen 133 RVGLVQWHPTAPNVLLSA---GS-DNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKD----KKVRVIDPRR 204 (472)
T ss_pred eEEEEeecccchhhHhhc---cC-CceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeeccc----ceeEEEcCCC
Confidence 577777887666555443 33 4789999999999653 2334455669999999555554432 2466666655
Q ss_pred C
Q 004690 271 D 271 (736)
Q Consensus 271 ~ 271 (736)
+
T Consensus 205 ~ 205 (472)
T KOG0303|consen 205 G 205 (472)
T ss_pred C
Confidence 4
No 397
>PF03283 PAE: Pectinacetylesterase
Probab=89.72 E-value=0.35 Score=51.54 Aligned_cols=37 Identities=24% Similarity=0.184 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHH
Q 004690 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVL 613 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~ 613 (736)
.-+.+++++|..+|.-++++|.+.|.|+||+-+..-+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 4678999999999888999999999999998776543
No 398
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=89.63 E-value=0.84 Score=44.15 Aligned_cols=84 Identities=15% Similarity=0.192 Sum_probs=53.2
Q ss_pred CcEEEEEcccCCCCCChhhh---hccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----C
Q 004690 545 GFIFAIAQIRGGGELGRQWY---ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR----P 617 (736)
Q Consensus 545 G~~v~~~d~RG~g~~g~~~~---~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~----p 617 (736)
-..|++|-||=..-. .|. ...........+.|+.+|.++-+++.. +-..++|.|||.|+.+...++..+ |
T Consensus 45 ~~~vfAP~YRQatl~--~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~~~~~p 121 (207)
T PF11288_consen 45 VCNVFAPRYRQATLY--AFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEEIAGDP 121 (207)
T ss_pred CCccccChhhcchhh--hhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHHhcCch
Confidence 356788888843211 111 000111123568999999998877642 235899999999999999988763 2
Q ss_pred ---CceeEEEEcCCccc
Q 004690 618 ---DLFKAAVAAVPFVD 631 (736)
Q Consensus 618 ---~~~~a~v~~~p~~d 631 (736)
.+++|-+...++..
T Consensus 122 l~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 122 LRKRLVAAYLIGYPVTV 138 (207)
T ss_pred HHhhhheeeecCccccH
Confidence 24566666666544
No 399
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=89.41 E-value=4.4 Score=42.01 Aligned_cols=130 Identities=16% Similarity=0.144 Sum_probs=75.8
Q ss_pred EEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc----cccCccceeEEeeCCeEEEE
Q 004690 177 LILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK----PLVGVTASVEWAGNEALVYI 252 (736)
Q Consensus 177 vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~----~~~~~~~~~~WspDg~l~y~ 252 (736)
.-+|.+.+.- + ..++-..+|||..+-+.++.+..| .|+|||+..+....- ....-..-++|+.+-.++..
T Consensus 246 W~vd~~Pf~g-H-~~SVEDLqWSptE~~vfaScS~Dg----sIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLas 319 (440)
T KOG0302|consen 246 WKVDQRPFTG-H-TKSVEDLQWSPTEDGVFASCSCDG----SIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLAS 319 (440)
T ss_pred eeecCccccc-c-ccchhhhccCCccCceEEeeecCc----eEEEEEecCCCccceeEeeccCCceeeEEccCCcceeee
Confidence 4467777653 3 567889999999999999888877 499999988843321 12222455899866553333
Q ss_pred EeCCCCCCceEEEEEcCCCCC-CcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCC
Q 004690 253 TMDEILRPDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (736)
Q Consensus 253 ~~~~~~~~~~v~~~~l~t~~~-~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~ 317 (736)
..|+. . +.+++|..-.. +.+..|.-... -..++.|+|....++..+.....-.||-+.++
T Consensus 320 G~DdG--t--~~iwDLR~~~~~~pVA~fk~Hk~-pItsieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 320 GGDDG--T--LSIWDLRQFKSGQPVATFKYHKA-PITSIEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred cCCCc--e--EEEEEhhhccCCCcceeEEeccC-CeeEEEeccccCceEEeccCCCcEEEEEeecc
Confidence 33322 1 22333332211 24444543322 23478899977766655554444445544443
No 400
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=89.16 E-value=5.5 Score=43.96 Aligned_cols=84 Identities=11% Similarity=0.156 Sum_probs=55.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~ 272 (736)
+...++||+.++++.+... ..|.++|...+.......+-....++|.|||.++.+..+. .++...|++-+.
T Consensus 262 v~~ca~sp~E~kLvlGC~D-----gSiiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~q----GelQ~FD~ALsp 332 (545)
T PF11768_consen 262 VICCARSPSEDKLVLGCED-----GSIILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQ----GELQCFDMALSP 332 (545)
T ss_pred ceEEecCcccceEEEEecC-----CeEEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcCC----ceEEEEEeecCc
Confidence 5667899999999988763 3599999877754432222224558999999777776543 247777777665
Q ss_pred CCcEEEEeecCCc
Q 004690 273 SNDICLYHEKDDI 285 (736)
Q Consensus 273 ~~~~~~~~~~~~~ 285 (736)
-+-.++.++..+.
T Consensus 333 i~~qLlsEd~~P~ 345 (545)
T PF11768_consen 333 IKMQLLSEDATPK 345 (545)
T ss_pred cceeeccccCCCc
Confidence 4444444444443
No 401
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.69 E-value=30 Score=35.20 Aligned_cols=175 Identities=17% Similarity=0.212 Sum_probs=96.5
Q ss_pred CceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCc--cceeEEeeCCeEEE
Q 004690 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV--TASVEWAGNEALVY 251 (736)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~--~~~~~WspDg~l~y 251 (736)
+.++.+|...+.. ....+++..|+||-+.| |++...+ .+|.-++.++.-....++.+. ..+++|.-+|.++.
T Consensus 71 ~y~~~i~akpi~g--~~~nvS~LTynp~~rtL-Fav~n~p---~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi 144 (316)
T COG3204 71 EYRARIDAKPILG--ETANVSSLTYNPDTRTL-FAVTNKP---AAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVI 144 (316)
T ss_pred CceEEEecccccc--ccccccceeeCCCcceE-EEecCCC---ceEEEEecCCceEEEecccccCChhHeEEecCCEEEE
Confidence 4566666554321 13348899999999987 4443333 567777877554444454443 33588988886655
Q ss_pred EEeCCCCCCceEEEEEcCCCCC----Cc-EEEEeec---CCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ce
Q 004690 252 ITMDEILRPDKAWLHKLEADQS----ND-ICLYHEK---DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-EL 322 (736)
Q Consensus 252 ~~~~~~~~~~~v~~~~l~t~~~----~~-~~~~~~~---~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~ 322 (736)
+.. |.++++.+.+..+.. .. ..-++.. +.. +-+++|+|..+.+++. ..+....||.++..... ..
T Consensus 145 ~dE----R~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~G-fEGlA~d~~~~~l~~a-KEr~P~~I~~~~~~~~~l~~ 218 (316)
T COG3204 145 VDE----RDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKG-FEGLAWDPVDHRLFVA-KERNPIGIFEVTQSPSSLSV 218 (316)
T ss_pred Eeh----hcceEEEEEEcCCccEEeccceEEeccccCCCCcC-ceeeecCCCCceEEEE-EccCCcEEEEEecCCccccc
Confidence 432 234577666654311 11 1112221 223 3478999998887764 34455677877643311 01
Q ss_pred EEe-ecccc------cee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004690 323 RVL-TPRVV------GVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 364 (736)
Q Consensus 323 ~~l-~~~~~------~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~ 364 (736)
... .+... ++. ..+.+..++|++++++. ..|..++.++
T Consensus 219 ~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ES----r~l~Evd~~G 264 (316)
T COG3204 219 HASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDES----RRLLEVDLSG 264 (316)
T ss_pred ccccCcccccceEeeccccceecCCCCcEEEEecCC----ceEEEEecCC
Confidence 111 11100 111 22455567888888775 4677777765
No 402
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=88.66 E-value=14 Score=37.10 Aligned_cols=202 Identities=14% Similarity=0.147 Sum_probs=107.5
Q ss_pred ceEEeecchhcCCCCeE-EEeeEEECC-CCCEEEEEEeCCCCcEEEEEEEECCCCCe---e-ccc-ccCccceeEEeeCC
Q 004690 175 EHLILDENVKAEGRGFY-SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTP---V-GKP-LVGVTASVEWAGNE 247 (736)
Q Consensus 175 ~~vllD~n~~~~~~~~~-~~~~~~~SP-DG~~la~~~~~~G~e~~~l~v~dl~tg~~---~-~~~-~~~~~~~~~WspDg 247 (736)
.+.+|..|+-. .|+ .+.++.|.- |-++|.-++- ..+.-|||+++|.. . ++. -+.-...++|+.+|
T Consensus 137 ~~~~L~~~kns---~~~aPlTSFDWne~dp~~igtSSi-----DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s 208 (364)
T KOG0290|consen 137 LQSVLNNNKNS---EFCAPLTSFDWNEVDPNLIGTSSI-----DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGS 208 (364)
T ss_pred hhhhhccCccc---ccCCcccccccccCCcceeEeecc-----cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCc
Confidence 34455555532 233 467777765 5555543322 25678889998733 1 221 12224459999988
Q ss_pred -eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCC-ceEEEEEEcCC-ccEEEEEecCcceeEEEEEeCCCCC-ceE
Q 004690 248 -ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDD-IYSLGLQASES-KKFLFIASESKITRFVFYLDVSKPE-ELR 323 (736)
Q Consensus 248 -~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~-~~~~~~~~S~D-g~~l~~~~~~~~~~~l~~~dl~~~~-~~~ 323 (736)
.+|-+...++ .|...+|..-+ ..+.+|+.+.+ .-.+.++|.+. -++|+-. ..+.++|.++|+.-+. +..
T Consensus 209 ~~~FASvgaDG----SvRmFDLR~le-HSTIIYE~p~~~~pLlRLswnkqDpnymATf--~~dS~~V~iLDiR~P~tpva 281 (364)
T KOG0290|consen 209 RDVFASVGADG----SVRMFDLRSLE-HSTIIYEDPSPSTPLLRLSWNKQDPNYMATF--AMDSNKVVILDIRVPCTPVA 281 (364)
T ss_pred cceEEEecCCC----cEEEEEecccc-cceEEecCCCCCCcceeeccCcCCchHHhhh--hcCCceEEEEEecCCCccee
Confidence 5554433221 25555665432 36778877653 23456777774 4555422 2345688999988765 344
Q ss_pred EeeccccceeE-EEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCc---eeeEecCCCCceeeeEEEe---CCEEEEEEE
Q 004690 324 VLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE---TTVLIPHRESVKLQDIQLF---IDHLAVYER 395 (736)
Q Consensus 324 ~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~---~~~l~~~~~~~~i~~~~~~---~~~l~~~~~ 395 (736)
.|......+.. .|.|.....+....+ ..+....|+..... ..++..-.....+..+.|. +|++.+.+.
T Consensus 282 ~L~~H~a~VNgIaWaPhS~~hictaGD----D~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 282 RLRNHQASVNGIAWAPHSSSHICTAGD----DCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred hhhcCcccccceEecCCCCceeeecCC----cceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEec
Confidence 44444444442 477766554444333 35666777765321 1122222223334455554 467766654
No 403
>PLN02454 triacylglycerol lipase
Probab=87.74 E-value=1.5 Score=46.97 Aligned_cols=56 Identities=20% Similarity=0.120 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-------C-CceeEEEEcCCcc
Q 004690 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-------P-DLFKAAVAAVPFV 630 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~-------p-~~~~a~v~~~p~~ 630 (736)
..+++.+.++.|+++..-..-+|.++|||+||.||..+|..- + -.+.+++..+|-+
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 446788888888876432223599999999999998777421 1 1245666666643
No 404
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=87.72 E-value=5.2 Score=48.44 Aligned_cols=109 Identities=13% Similarity=0.139 Sum_probs=62.8
Q ss_pred eeEEECCCCCEEEEEEeCCCC-cEEEEEEEECCCCCeec--ccccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGD-EIYTVYVIDIETGTPVG--KPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~-e~~~l~v~dl~tg~~~~--~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
-.++|-.||+++|.+.-.... ....|+|++-+ |+... ...++....++|-|.|.++.+.....++ ..|....-.+
T Consensus 213 ~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~-~~VvFfErNG 290 (928)
T PF04762_consen 213 VRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDR-HDVVFFERNG 290 (928)
T ss_pred eEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCC-cEEEEEecCC
Confidence 346899999999988652222 37889999987 55433 2445556679999999544444333333 3343333221
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEec
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASE 304 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~ 304 (736)
-.-..-.+-......-...+.|++|+..|++...
T Consensus 291 LrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 291 LRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLE 324 (928)
T ss_pred cEeeeEecCCCCCCceeeEEEECCCCCEEEEEec
Confidence 1000111111111222357899999999998664
No 405
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=87.72 E-value=4.3 Score=41.25 Aligned_cols=129 Identities=19% Similarity=0.260 Sum_probs=77.4
Q ss_pred ceEEeecchhcCCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCe------ecccccCccceeEEeeCC-
Q 004690 175 EHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP------VGKPLVGVTASVEWAGNE- 247 (736)
Q Consensus 175 ~~vllD~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~------~~~~~~~~~~~~~WspDg- 247 (736)
.-|||-.|.- ...+.|||.++++|... | ...|-|.-.+..+. +...+.....++.|.|++
T Consensus 93 tlvLlRiNrA--------At~V~WsP~enkFAVgS---g--ar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnV 159 (361)
T KOG1523|consen 93 TLVLLRINRA--------ATCVKWSPKENKFAVGS---G--ARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNV 159 (361)
T ss_pred ceeEEEeccc--------eeeEeecCcCceEEecc---C--ccEEEEEEEecccceehhhhhCCccccceeeeeccCCcc
Confidence 3466655542 34579999999998654 2 23344444443322 122455556679999999
Q ss_pred eEEEEEeCCCCCCceEEEEEcCCCCCCc----E-----EEEee-cCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCC
Q 004690 248 ALVYITMDEILRPDKAWLHKLEADQSND----I-----CLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (736)
Q Consensus 248 ~l~y~~~~~~~~~~~v~~~~l~t~~~~~----~-----~~~~~-~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~ 317 (736)
-++-.+.|..-|-+..|...+++.++.. . ++.+- ..+.+..++.|||+|..|++...+.. +...|..
T Consensus 160 LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~---v~~~da~ 236 (361)
T KOG1523|consen 160 LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDST---VSFVDAA 236 (361)
T ss_pred eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCc---eEEeecC
Confidence 6666665655565666777777654311 1 11111 22345567889999999998775543 4666666
Q ss_pred CC
Q 004690 318 KP 319 (736)
Q Consensus 318 ~~ 319 (736)
++
T Consensus 237 ~p 238 (361)
T KOG1523|consen 237 GP 238 (361)
T ss_pred CC
Confidence 54
No 406
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=87.71 E-value=24 Score=37.81 Aligned_cols=59 Identities=22% Similarity=0.188 Sum_probs=38.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-c-ccCccceeEEeeCC-eEEEEEeC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMD 255 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg-~l~y~~~~ 255 (736)
.+-..++||||++||++- -...|.|||.++.+.+.. . ..+...+++|-..- .+|-.+.|
T Consensus 204 eil~~avS~Dgkylatgg-----~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~D 265 (479)
T KOG0299|consen 204 EILTLAVSSDGKYLATGG-----RDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASAD 265 (479)
T ss_pred eeEEEEEcCCCcEEEecC-----CCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecC
Confidence 466789999999999642 246788999999988764 1 22334556764333 45555544
No 407
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=87.46 E-value=30 Score=35.34 Aligned_cols=68 Identities=19% Similarity=0.220 Sum_probs=44.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec-ccccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~-~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
.+...++.|.|++ |.++. | ...|+.|||-.|+.-- ..+......+.|+|.| +++....+ +|-.+.++
T Consensus 129 ~Vt~lsiHPS~KL-ALsVg--~--D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~------~i~i~q~d 197 (362)
T KOG0294|consen 129 QVTDLSIHPSGKL-ALSVG--G--DQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN------KIDIYQLD 197 (362)
T ss_pred ccceeEecCCCce-EEEEc--C--CceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc------EEEEEecc
Confidence 3888999999984 55553 3 2469999998887532 2444444559999999 56655432 34455555
Q ss_pred C
Q 004690 270 A 270 (736)
Q Consensus 270 t 270 (736)
.
T Consensus 198 ~ 198 (362)
T KOG0294|consen 198 N 198 (362)
T ss_pred c
Confidence 4
No 408
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=87.13 E-value=12 Score=39.32 Aligned_cols=188 Identities=14% Similarity=0.110 Sum_probs=101.8
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCe-ecccccCc-cceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKPLVGV-TASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~-~~~~~~~~-~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
.+|..+++||.-...+-.++ ...|.|||..-.+. +.+...+. .-++.|.|.-.++++..++. -|-+++-
T Consensus 181 eaIRdlafSpnDskF~t~Sd-----Dg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDn----lVKlWDp 251 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSD-----DGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDN----LVKLWDP 251 (464)
T ss_pred hhhheeccCCCCceeEEecC-----CCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCc----eeEeecC
Confidence 56888999995555443222 24799999765443 23333332 44599999987777765543 3556666
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEE
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t 347 (736)
.++.. -..+. ......+.+.|+++|.||+-.+.+. .+-++|+.+-+++.........+. ..|.|-...|+...
T Consensus 252 rSg~c-l~tlh--~HKntVl~~~f~~n~N~Llt~skD~---~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsg 325 (464)
T KOG0284|consen 252 RSGSC-LATLH--GHKNTVLAVKFNPNGNWLLTGSKDQ---SCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSG 325 (464)
T ss_pred CCcch-hhhhh--hccceEEEEEEcCCCCeeEEccCCc---eEEEEehhHhHHHHHhhcchhhheeeccccccccceeec
Confidence 55521 11111 2234566788999999987654432 355666664322444443443333 34777766666555
Q ss_pred cCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeC-CEEEEEEEeCC
Q 004690 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGG 398 (736)
Q Consensus 348 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g 398 (736)
..+ +.|+...+.. ......+++..+..|-++.+-. ++|+.....+.
T Consensus 326 g~D----gsvvh~~v~~-~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~ 372 (464)
T KOG0284|consen 326 GSD----GSVVHWVVGL-EEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDR 372 (464)
T ss_pred cCC----CceEEEeccc-cccccCCCcccccceeeeeccccceeEeecCCCc
Confidence 444 3344333321 1122244544455555555554 35544444333
No 409
>PRK13614 lipoprotein LpqB; Provisional
Probab=86.94 E-value=31 Score=39.21 Aligned_cols=161 Identities=14% Similarity=0.019 Sum_probs=85.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC-ccceeEEeeCCeEEEEEeCCCCCCceEEEEEc-C
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKL-E 269 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~-~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l-~ 269 (736)
.+..+.+|+||+.+|+.. +. ...+++.... +.... .+.+ ....++|.++|.++ +..+. .+..|.+..- +
T Consensus 344 ~~~s~avS~~g~~~A~~~---~~-~~~l~~~~~g-~~~~~-~~~g~~Lt~PS~d~~g~vW-tv~~g--~~~~vv~~~~~g 414 (573)
T PRK13614 344 GPASPAESPVSQTVAFLN---GS-RTTLYTVSPG-QPARA-LTSGSTLTRPSFSPQDWVW-TAGPG--GNGRIVAYRPTG 414 (573)
T ss_pred cccceeecCCCceEEEec---CC-CcEEEEecCC-Cccee-eecCCCccCCcccCCCCEE-EeeCC--CCceEEEEecCC
Confidence 456789999999999972 22 3577776653 33222 2222 24568999888444 33332 2224555432 1
Q ss_pred CCCCC--c--EEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeC---CCCCceEEeeccc------cceeEEE
Q 004690 270 ADQSN--D--ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV---SKPEELRVLTPRV------VGVDTAA 336 (736)
Q Consensus 270 t~~~~--~--~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl---~~~~~~~~l~~~~------~~~~~~~ 336 (736)
++... . ..-....+..-...+..|+||-.+++.....+...|++.-+ .+|. ++.|.... .-....|
T Consensus 415 ~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~-P~~L~~~~~~~~~~~~~sl~W 493 (573)
T PRK13614 415 VAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGT-PRELTAPITLAADSDADTGAW 493 (573)
T ss_pred CcccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCC-eEEccCceecccCCCcceeEE
Confidence 21100 0 11111112223456788999999988775555555666322 2333 34443211 1122346
Q ss_pred eeeCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004690 337 SHRGNHFFITRRSDELFNSELLACPVDN 364 (736)
Q Consensus 337 s~dg~~l~~~t~~~~~~~~~l~~~~~~~ 364 (736)
..+ ..|++.+... ..+..++.+.+++
T Consensus 494 ~~~-~sl~V~~~~~-~~~~~~~~v~v~~ 519 (573)
T PRK13614 494 VGD-STVVVTKASA-TSNVVPELLSVDA 519 (573)
T ss_pred cCC-CEEEEEeccC-CCcceEEEEEeCC
Confidence 554 4577777654 2455667777743
No 410
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=86.83 E-value=3.1 Score=47.41 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=53.5
Q ss_pred cEEEEEEEECCCCCeecc-c-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEE
Q 004690 215 EIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQ 291 (736)
Q Consensus 215 e~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~ 291 (736)
+...|.++|..|.+..+. . -.+....++||||| .|+-.+.|. .|..+++.++.--|-+.++. -..++.
T Consensus 554 ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~-----tIr~wDlpt~~lID~~~vd~----~~~sls 624 (910)
T KOG1539|consen 554 DDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS-----TIRTWDLPTGTLIDGLLVDS----PCTSLS 624 (910)
T ss_pred CceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCC-----cEEEEeccCcceeeeEecCC----cceeeE
Confidence 357899999988877653 1 22335669999999 565555443 48888998874334444321 234678
Q ss_pred EcCCccEEEEEe
Q 004690 292 ASESKKFLFIAS 303 (736)
Q Consensus 292 ~S~Dg~~l~~~~ 303 (736)
+||.|.+|+...
T Consensus 625 ~SPngD~LAT~H 636 (910)
T KOG1539|consen 625 FSPNGDFLATVH 636 (910)
T ss_pred ECCCCCEEEEEE
Confidence 899999987643
No 411
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=86.75 E-value=20 Score=38.50 Aligned_cols=100 Identities=12% Similarity=0.099 Sum_probs=51.2
Q ss_pred ceeEEeeCCeEEEEEeCCCCCCceEEEEE-cCCCC-C--CcEEEEeecCC------ceEEEEEEcCCccEEEEEecCcc-
Q 004690 239 ASVEWAGNEALVYITMDEILRPDKAWLHK-LEADQ-S--NDICLYHEKDD------IYSLGLQASESKKFLFIASESKI- 307 (736)
Q Consensus 239 ~~~~WspDg~l~y~~~~~~~~~~~v~~~~-l~t~~-~--~~~~~~~~~~~------~~~~~~~~S~Dg~~l~~~~~~~~- 307 (736)
.+++|.++| +|++.. .+|+++. ...+. . +.+++++.... .....+.|.|||+ |+++..+..
T Consensus 75 ~Gi~~~~~G-lyV~~~------~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G~~~~ 146 (367)
T TIGR02604 75 TGLAVAVGG-VYVATP------PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHGNTLA 146 (367)
T ss_pred cceeEecCC-EEEeCC------CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecccCCC
Confidence 458898998 554321 2476553 32211 1 23344443211 1123578999995 566443210
Q ss_pred ----------------eeEEEEEeCCCCCceEEeeccccce-eEEEeeeCCEEEEEEc
Q 004690 308 ----------------TRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRR 348 (736)
Q Consensus 308 ----------------~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~t~ 348 (736)
...+++++.++++ .+.+.....+. ...|+++|+ +|+.-+
T Consensus 147 ~~~~~~~~~~~~~~~~~g~i~r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~-l~~tdn 202 (367)
T TIGR02604 147 SKVTRPGTSDESRQGLGGGLFRYNPDGGK-LRVVAHGFQNPYGHSVDSWGD-VFFCDN 202 (367)
T ss_pred ceeccCCCccCcccccCceEEEEecCCCe-EEEEecCcCCCccceECCCCC-EEEEcc
Confidence 1357888887765 55555433322 234777665 444433
No 412
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.57 E-value=36 Score=33.77 Aligned_cols=154 Identities=12% Similarity=0.080 Sum_probs=87.2
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cc---cCccceeEEeeCC-eEEEEEeCCCCCCceEEEEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~---~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~ 267 (736)
+-.++||+...-++++..-.| .|+++|+.- ...++ .. ..-..++.|.+-. +.+.++. -+..-+|| +
T Consensus 63 LfdV~Wse~~e~~~~~a~GDG----SLrl~d~~~-~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsS--WD~TiKLW--~ 133 (311)
T KOG0277|consen 63 LFDVAWSENHENQVIAASGDG----SLRLFDLTM-PSKPIHKFKEHKREVYSVDWNTVRRRIFLTSS--WDGTIKLW--D 133 (311)
T ss_pred eeEeeecCCCcceEEEEecCc----eEEEeccCC-CCcchhHHHhhhhheEEeccccccceeEEeec--cCCceEee--c
Confidence 556799999999999998766 488888432 21222 11 1123448898776 5655553 11122344 3
Q ss_pred cCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccc-cceeEEEeeeCCEEEEE
Q 004690 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFIT 346 (736)
Q Consensus 268 l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~ 346 (736)
-.-+ +.+..|.+.+ .......|||--.-++.+.+....-.+|-++..+ + ...+.... +-....|+.....+++.
T Consensus 134 ~~r~--~Sv~Tf~gh~-~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g-k-~~~i~ah~~Eil~cdw~ky~~~vl~T 208 (311)
T KOG0277|consen 134 PNRP--NSVQTFNGHN-SCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG-K-FMSIEAHNSEILCCDWSKYNHNVLAT 208 (311)
T ss_pred CCCC--cceEeecCCc-cEEEEEecCCCCCCeEEEccCCceEEEEEecCCC-c-eeEEEeccceeEeecccccCCcEEEe
Confidence 3222 2344455443 3344677899766666666666666777776663 3 33332222 22234588877777666
Q ss_pred EcCCCCCCcEEEEEeCCC
Q 004690 347 RRSDELFNSELLACPVDN 364 (736)
Q Consensus 347 t~~~~~~~~~l~~~~~~~ 364 (736)
...+ .-|...|+..
T Consensus 209 g~vd----~~vr~wDir~ 222 (311)
T KOG0277|consen 209 GGVD----NLVRGWDIRN 222 (311)
T ss_pred cCCC----ceEEEEehhh
Confidence 5544 3455566654
No 413
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=86.52 E-value=5.2 Score=43.43 Aligned_cols=126 Identities=17% Similarity=0.185 Sum_probs=65.9
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEE--eeCC-eEEEEEeCC-CCCCceEEEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEW--AGNE-ALVYITMDE-ILRPDKAWLH 266 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~W--spDg-~l~y~~~~~-~~~~~~v~~~ 266 (736)
.++...+|-|-++-+.......| .+|++|.+ +......+.| .+++ .+....... ..+ +-|.++
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sG----nlyly~~~--------~~~~~t~p~~~~~k~~~~f~i~t~ksk~~r-NPv~~w 286 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASG----NLYLYDKE--------IVCGATAPSYQALKDGDQFAILTSKSKKTR-NPVARW 286 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecC----ceEEeecc--------ccccCCCCcccccCCCCeeEEeeeeccccC-Ccccee
Confidence 56777888886665554555556 47777762 1111112333 3455 443332211 111 123344
Q ss_pred EcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeec-cccceeE-EEeeeCCEEE
Q 004690 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDT-AASHRGNHFF 344 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~ 344 (736)
.++.+ -...+.+||||++|+..+.+.. |.+.|.++.+ +..+.+ -..+... .|||||++|+
T Consensus 287 ~~~~g--------------~in~f~FS~DG~~LA~VSqDGf---LRvF~fdt~e-Llg~mkSYFGGLLCvcWSPDGKyIv 348 (636)
T KOG2394|consen 287 HIGEG--------------SINEFAFSPDGKYLATVSQDGF---LRIFDFDTQE-LLGVMKSYFGGLLCVCWSPDGKYIV 348 (636)
T ss_pred Eeccc--------------cccceeEcCCCceEEEEecCce---EEEeeccHHH-HHHHHHhhccceEEEEEcCCccEEE
Confidence 44433 0114578999999998776542 4556666544 433333 2334443 4999999665
Q ss_pred EEE
Q 004690 345 ITR 347 (736)
Q Consensus 345 ~~t 347 (736)
.-.
T Consensus 349 tGG 351 (636)
T KOG2394|consen 349 TGG 351 (636)
T ss_pred ecC
Confidence 443
No 414
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=86.49 E-value=16 Score=35.75 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=62.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCc----EEEEEEEECCCCCeecc-cccCccceeEEeeCC-eEEEEEeCCCCCCceE--E
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDE----IYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKA--W 264 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e----~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v--~ 264 (736)
...-..+|||++.+=++...|.+ ...||.+-+. +++... ..-++..+++|+-|- .+||+-. ..+.| |
T Consensus 111 ~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~-h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDs----ln~~V~a~ 185 (310)
T KOG4499|consen 111 LNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG-HQVELIWNCVGISNGLAWDSDAKKFYYIDS----LNYEVDAY 185 (310)
T ss_pred cccCccCCCCceeeeeeccccccccccccEEEEeccC-CCceeeehhccCCccccccccCcEEEEEcc----CceEEeee
Confidence 34457899999977666655542 1346665443 333221 223345679999777 5766632 23445 6
Q ss_pred EEEcCCCCC-CcEEEEeecCCceEEEEEEcCCcc------EEEEEecCcceeEEEEEeCCCCC
Q 004690 265 LHKLEADQS-NDICLYHEKDDIYSLGLQASESKK------FLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 265 ~~~l~t~~~-~~~~~~~~~~~~~~~~~~~S~Dg~------~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
-++..++.. ....++.-....-+- ..-|||- .|++.. .....|+.+|+.+|+
T Consensus 186 dyd~~tG~~snr~~i~dlrk~~~~e--~~~PDGm~ID~eG~L~Va~--~ng~~V~~~dp~tGK 244 (310)
T KOG4499|consen 186 DYDCPTGDLSNRKVIFDLRKSQPFE--SLEPDGMTIDTEGNLYVAT--FNGGTVQKVDPTTGK 244 (310)
T ss_pred ecCCCcccccCcceeEEeccCCCcC--CCCCCcceEccCCcEEEEE--ecCcEEEEECCCCCc
Confidence 666766643 233444321100000 0123332 233332 234568899999887
No 415
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=86.28 E-value=1.3 Score=44.14 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----CCceeEEEEcCCcc
Q 004690 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR-----PDLFKAAVAAVPFV 630 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~-----p~~~~a~v~~~p~~ 630 (736)
.++...+..+.++. ...+|.+.|||+||.+|..++... +..+.++...+|.+
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 45555555555442 236899999999999987766541 34467777677654
No 416
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=86.05 E-value=5.5 Score=39.75 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=56.0
Q ss_pred CcEEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCC
Q 004690 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (736)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (736)
.|+ |+.||-...+....+....+.+.+. |..|.+.+.- .| -...|. .+..+.+.-+.+.+..... -+
T Consensus 24 ~P~-ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g-~~~s~l--------~pl~~Qv~~~ce~v~~m~~-ls 91 (296)
T KOG2541|consen 24 VPV-IVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DG-IKDSSL--------MPLWEQVDVACEKVKQMPE-LS 91 (296)
T ss_pred CCE-EEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CC-cchhhh--------ccHHHHHHHHHHHHhcchh-cc
Confidence 565 5579976666554555566666665 8888888872 22 112222 2333555556666664332 35
Q ss_pred CcEEEEEeChHHHHHHHHHHhCC
Q 004690 595 EKLCIEGRSAGGLLIGAVLNMRP 617 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~~~p 617 (736)
+-.-++|.|.||+++=+++...+
T Consensus 92 qGynivg~SQGglv~Raliq~cd 114 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCD 114 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCC
Confidence 67899999999988766665533
No 417
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=85.88 E-value=55 Score=39.68 Aligned_cols=118 Identities=13% Similarity=0.124 Sum_probs=66.1
Q ss_pred eEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004690 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 195 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
.+.|--||+++|.+.-....+...|.|+|-+ |..... +..+....++|-|.| .++-+....+ .. +|....-.+-
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~s-d~-~IvffErNGL 276 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTS-DS-DIVFFERNGL 276 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCC-CC-cEEEEecCCc
Confidence 4688899999998766655555789999988 443322 233445679999998 4554443322 11 2333222111
Q ss_pred -CCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeC
Q 004690 272 -QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 316 (736)
Q Consensus 272 -~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl 316 (736)
-.+-.+-+ ..|..-...+.|..++..|++.......+.|.+...
T Consensus 277 ~hg~f~l~~-p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 277 RHGEFVLPF-PLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred cccccccCC-cccccchheeeecCCCCceeeeecccccceEEEEEe
Confidence 00101111 111111346889999998888665555444444443
No 418
>PRK02888 nitrous-oxide reductase; Validated
Probab=85.84 E-value=43 Score=38.13 Aligned_cols=161 Identities=11% Similarity=0.143 Sum_probs=77.1
Q ss_pred EEEEcCCccEEEEEecC-cceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCC---
Q 004690 289 GLQASESKKFLFIASES-KITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN--- 364 (736)
Q Consensus 289 ~~~~S~Dg~~l~~~~~~-~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~--- 364 (736)
.+.+++||+++++++.+ .....+..++..+.. ......- .+.+ .+..+|+..++ + ..++.++|...
T Consensus 239 ~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d-~~vvfni-~~ie-a~vkdGK~~~V--~-----gn~V~VID~~t~~~ 308 (635)
T PRK02888 239 NVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD-WVVVFNI-ARIE-EAVKAGKFKTI--G-----GSKVPVVDGRKAAN 308 (635)
T ss_pred cceECCCCCEEEEeccCcccCcceeeeccccCc-eEEEEch-HHHH-HhhhCCCEEEE--C-----CCEEEEEECCcccc
Confidence 45789999999998732 233455666654433 2222211 1111 23457776664 1 13577777654
Q ss_pred -CCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccc-cccCCceeeecCcccccCCCCcccCcc
Q 004690 365 -TSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLK-SLQGGKSVEFIDPVYSIDPSESVFSSR 442 (736)
Q Consensus 365 -~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~-~l~~~~~i~~p~~~~~v~~~~~~~~~~ 442 (736)
.......++... ...++.++.|+-+++......+.+.|+++..-..... .+ +.+..-.-+...-.+.....|+++
T Consensus 309 ~~~~v~~yIPVGK--sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~-~~~~~vvaevevGlGPLHTaFDg~ 385 (635)
T PRK02888 309 AGSALTRYVPVPK--NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKI-KPRDAVVAEPELGLGPLHTAFDGR 385 (635)
T ss_pred CCcceEEEEECCC--CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccC-CccceEEEeeccCCCcceEEECCC
Confidence 111222344332 2445555555555555555566788888863111000 00 001000000000011222334443
Q ss_pred eEEEEeccCCCCcEEEEEECCC
Q 004690 443 ILRFHYSSLRTPPSVYDYDMDM 464 (736)
Q Consensus 443 ~~~~~~ss~~~P~~~~~~d~~~ 464 (736)
- ..|+|...-.++..+|+.+
T Consensus 386 G--~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 386 G--NAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred C--CEEEeEeecceeEEEehHH
Confidence 2 2566777777888888765
No 419
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=85.70 E-value=8.8 Score=41.70 Aligned_cols=57 Identities=18% Similarity=0.182 Sum_probs=36.4
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc--cccCccceeEEeeCC-eEEEEEeC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMD 255 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~--~~~~~~~~~~WspDg-~l~y~~~~ 255 (736)
+..-+|||||.-|.- + | |.-.|.+|.-. |-.+.. ........++|.|++ .++|+..+
T Consensus 107 ~~~gRW~~dGtgLlt-~---G-EDG~iKiWSrs-GMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~ 166 (737)
T KOG1524|consen 107 ISSGRWSPDGAGLLT-A---G-EDGVIKIWSRS-GMLRSTVVQNEESIRCARWAPNSNSIVFCQGG 166 (737)
T ss_pred hhhcccCCCCceeee-e---c-CCceEEEEecc-chHHHHHhhcCceeEEEEECCCCCceEEecCC
Confidence 456699999987652 2 2 23467888653 443321 223334568999999 89998654
No 420
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=85.50 E-value=3.5 Score=39.71 Aligned_cols=80 Identities=20% Similarity=0.151 Sum_probs=45.1
Q ss_pred CchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHH-HHHHHHHcCCCCCCcEEEEEeChHHHHHHHH
Q 004690 534 FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIA-CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 612 (736)
Q Consensus 534 ~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~ 612 (736)
|......|. ..+.+..++.+|.+.... ....++++.. .++.+... ....++.++|+|+||.++..+
T Consensus 15 ~~~~~~~l~-~~~~v~~~~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~ 81 (212)
T smart00824 15 YARLAAALR-GRRDVSALPLPGFGPGEP----------LPASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAHAV 81 (212)
T ss_pred HHHHHHhcC-CCccEEEecCCCCCCCCC----------CCCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHHHH
Confidence 344444443 367888999988753211 1122334333 22333332 123578999999999999777
Q ss_pred HHh---CCCceeEEEEc
Q 004690 613 LNM---RPDLFKAAVAA 626 (736)
Q Consensus 613 ~~~---~p~~~~a~v~~ 626 (736)
+.+ .++.+..++..
T Consensus 82 a~~l~~~~~~~~~l~~~ 98 (212)
T smart00824 82 AARLEARGIPPAAVVLL 98 (212)
T ss_pred HHHHHhCCCCCcEEEEE
Confidence 764 34445555544
No 421
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=85.32 E-value=7.9 Score=42.59 Aligned_cols=168 Identities=14% Similarity=0.205 Sum_probs=75.0
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCccceeEEeeCCeEEEEEeCCCCCCceEEE-EEcCCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWL-HKLEAD 271 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~-~~l~t~ 271 (736)
....+.+|+|+.++. .|+..+.||- +...+. ...+....+.|+++++++.... ...|.. .++...
T Consensus 35 p~~ls~npngr~v~V----~g~geY~iyt----~~~~r~-k~~G~g~~~vw~~~n~yAv~~~-----~~~I~I~kn~~~~ 100 (443)
T PF04053_consen 35 PQSLSHNPNGRFVLV----CGDGEYEIYT----ALAWRN-KAFGSGLSFVWSSRNRYAVLES-----SSTIKIYKNFKNE 100 (443)
T ss_dssp -SEEEE-TTSSEEEE----EETTEEEEEE----TTTTEE-EEEEE-SEEEE-TSSEEEEE-T-----TS-EEEEETTEE-
T ss_pred CeeEEECCCCCEEEE----EcCCEEEEEE----ccCCcc-cccCceeEEEEecCccEEEEEC-----CCeEEEEEcCccc
Confidence 567789999999998 2333677776 111111 1122334589999777555432 123444 344332
Q ss_pred CCCcEEEEeecCCceEE-EEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEEcC
Q 004690 272 QSNDICLYHEKDDIYSL-GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (736)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~ 349 (736)
.. ..+ ..+ +.+ .+ +. |..|.+.+++ .|...|..+++ ...-..- .++. ..|+++|+.+.+.+..
T Consensus 101 ~~--k~i-~~~---~~~~~I-f~--G~LL~~~~~~----~i~~yDw~~~~-~i~~i~v-~~vk~V~Ws~~g~~val~t~~ 165 (443)
T PF04053_consen 101 VV--KSI-KLP---FSVEKI-FG--GNLLGVKSSD----FICFYDWETGK-LIRRIDV-SAVKYVIWSDDGELVALVTKD 165 (443)
T ss_dssp TT--------S---S-EEEE-E---SSSEEEEETT----EEEEE-TTT---EEEEESS--E-EEEEE-TTSSEEEEE-S-
T ss_pred cc--eEE-cCC---cccceE-Ec--CcEEEEECCC----CEEEEEhhHcc-eeeEEec-CCCcEEEEECCCCEEEEEeCC
Confidence 11 111 111 111 11 22 7766665433 37888998876 2221121 1233 3599999999888754
Q ss_pred CCCCCcEEEEEeCC------CCCce-e-eEecCCCCceeeeEEEeCCEEEEEEE
Q 004690 350 DELFNSELLACPVD------NTSET-T-VLIPHRESVKLQDIQLFIDHLAVYER 395 (736)
Q Consensus 350 ~~~~~~~l~~~~~~------~~~~~-~-~l~~~~~~~~i~~~~~~~~~l~~~~~ 395 (736)
...|+..+.+ ..+.. . .++.+ -...+.+..|.++ ++++.+
T Consensus 166 ----~i~il~~~~~~~~~~~~~g~e~~f~~~~E-~~~~IkSg~W~~d-~fiYtT 213 (443)
T PF04053_consen 166 ----SIYILKYNLEAVAAIPEEGVEDAFELIHE-ISERIKSGCWVED-CFIYTT 213 (443)
T ss_dssp ----SEEEEEE-HHHHHHBTTTB-GGGEEEEEE-E-S--SEEEEETT-EEEEE-
T ss_pred ----eEEEEEecchhcccccccCchhceEEEEE-ecceeEEEEEEcC-EEEEEc
Confidence 3556666654 10111 1 12222 1335778889999 443443
No 422
>KOG4328 consensus WD40 protein [Function unknown]
Probab=85.26 E-value=27 Score=37.46 Aligned_cols=197 Identities=14% Similarity=0.146 Sum_probs=101.3
Q ss_pred EEeeEEECCCCC-EEEEEEeCCCCcEEEEEEEECCCCCeecc-----cccC-ccceeEEeeCC--eEEEEEeCCCCCCce
Q 004690 192 SVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PLVG-VTASVEWAGNE--ALVYITMDEILRPDK 262 (736)
Q Consensus 192 ~~~~~~~SPDG~-~la~~~~~~G~e~~~l~v~dl~tg~~~~~-----~~~~-~~~~~~WspDg--~l~y~~~~~~~~~~~ 262 (736)
.+...+|.|-.. .+.-+-+..| +|-+||+.+.+...+ +... -++++.|+|.+ +||-++.|..
T Consensus 188 Rit~l~fHPt~~~~lva~GdK~G----~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt----- 258 (498)
T KOG4328|consen 188 RITSLAFHPTENRKLVAVGDKGG----QVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT----- 258 (498)
T ss_pred ceEEEEecccCcceEEEEccCCC----cEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce-----
Confidence 578889999776 4444444444 799999975443322 1111 25678999998 5666666653
Q ss_pred EEEEEcCCCCCCcEEEEee-cCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeecccccee-EEEeee
Q 004690 263 AWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASHR 339 (736)
Q Consensus 263 v~~~~l~t~~~~~~~~~~~-~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~-~~~s~d 339 (736)
+...++.+...+ .++.- .+..++.+..++.+.+.+++..+-+ .. -++|+.+++ ....+.-....+. ..+.|-
T Consensus 259 iR~~D~~~~i~e--~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-~f--~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~ 333 (498)
T KOG4328|consen 259 IRLQDFEGNISE--EVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-NF--NVIDLRTDGSEYENLRLHKKKITSVALNPV 333 (498)
T ss_pred eeeeeecchhhH--HHhhcCccceeeeeccccCCCccEEEeeccc-ce--EEEEeecCCccchhhhhhhcccceeecCCC
Confidence 566677766432 23322 2334455677788877777654433 33 344544433 1222221111222 235565
Q ss_pred CCEEEEEEcCCCCCCcEEEEEeCCCCCceee--EecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEc
Q 004690 340 GNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 407 (736)
Q Consensus 340 g~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~--l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l 407 (736)
..+++.....+. ..+||-+.--.+..... .+++...+...-|++++..|+ ....+ ..|.|++.
T Consensus 334 ~p~~laT~s~D~--T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~-TT~~D--~~IRv~ds 398 (498)
T KOG4328|consen 334 CPWFLATASLDQ--TAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLL-TTCQD--NEIRVFDS 398 (498)
T ss_pred CchheeecccCc--ceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceE-eeccC--CceEEeec
Confidence 555555544442 33454332111111111 344554444455667776643 33322 24667765
No 423
>PLN02408 phospholipase A1
Probab=85.12 E-value=1.3 Score=46.73 Aligned_cols=38 Identities=18% Similarity=0.063 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
+.+.+.+..++++..-.+.+|.+.|||+||.||..+|.
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHH
Confidence 45666677776653323347999999999999977765
No 424
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=85.05 E-value=1.3 Score=49.32 Aligned_cols=74 Identities=12% Similarity=0.133 Sum_probs=50.1
Q ss_pred CchhHHHHHHCCcEEEEEcccCCCCCChhhhhcccc-ccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHH
Q 004690 534 FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF-LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 612 (736)
Q Consensus 534 ~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~ 612 (736)
|......|++.||. --|++|. ...|..+... ..+..-|..+...++.+.+.. .-.+|.|+||||||.++...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gA---PYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMA---AYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeec---ccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHH
Confidence 46777899999997 4556542 3455544221 222345577778888776542 13689999999999999887
Q ss_pred HH
Q 004690 613 LN 614 (736)
Q Consensus 613 ~~ 614 (736)
+.
T Consensus 231 L~ 232 (642)
T PLN02517 231 MK 232 (642)
T ss_pred HH
Confidence 66
No 425
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=85.04 E-value=57 Score=34.89 Aligned_cols=153 Identities=10% Similarity=0.111 Sum_probs=84.1
Q ss_pred eeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCC
Q 004690 240 SVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (736)
Q Consensus 240 ~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~ 318 (736)
.++|..+- .++....- ...|.++++.++. ....++..... ...+.|.|-.-.++++..-. ..+-+.|+..
T Consensus 248 ~Ls~n~~~~nVLaSgsa----D~TV~lWD~~~g~--p~~s~~~~~k~-Vq~l~wh~~~p~~LLsGs~D--~~V~l~D~R~ 318 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSA----DKTVKLWDVDTGK--PKSSITHHGKK-VQTLEWHPYEPSVLLSGSYD--GTVALKDCRD 318 (463)
T ss_pred HHHhccccceeEEecCC----CceEEEEEcCCCC--cceehhhcCCc-eeEEEecCCCceEEEecccc--ceEEeeeccC
Confidence 35676555 56665432 2358888998884 33444322222 23567877766655544322 2345566653
Q ss_pred CCceEEeecccccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceee-EecCCCCceeeeEEEeCC--EEEEEE
Q 004690 319 PEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFID--HLAVYE 394 (736)
Q Consensus 319 ~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~-l~~~~~~~~i~~~~~~~~--~l~~~~ 394 (736)
....-.-.+-...++ ..|.|.....+|.+..+ +.|+.+|+..++...| +.++.. .|.+++.+.. +++...
T Consensus 319 ~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tdd----G~v~~~D~R~~~~~vwt~~AHd~--~ISgl~~n~~~p~~l~t~ 392 (463)
T KOG0270|consen 319 PSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDD----GTVYYFDIRNPGKPVWTLKAHDD--EISGLSVNIQTPGLLSTA 392 (463)
T ss_pred ccccCceEEeccceEEEEecCCCceeEEEecCC----ceEEeeecCCCCCceeEEEeccC--CcceEEecCCCCcceeec
Confidence 220000111122334 34778777677776554 5799999988776667 555654 4566666553 444444
Q ss_pred EeCCeeEEEEEEcCC
Q 004690 395 REGGLQKITTYRLPA 409 (736)
Q Consensus 395 ~~~g~~~l~v~~l~~ 409 (736)
..++ .+.+|+++.
T Consensus 393 s~d~--~Vklw~~~~ 405 (463)
T KOG0270|consen 393 STDK--VVKLWKFDV 405 (463)
T ss_pred cccc--eEEEEeecC
Confidence 4333 467777763
No 426
>PLN02606 palmitoyl-protein thioesterase
Probab=84.68 E-value=8 Score=39.74 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=58.9
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (736)
.+.|+|| .||-......+++......+.+. |.-+..+. -|.+.. ..| -.+..+.+..+.+.|.+....
T Consensus 25 ~~~PvVi-wHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~-~s~--------~~~~~~Qv~~vce~l~~~~~L 93 (306)
T PLN02606 25 LSVPFVL-FHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ-DSL--------FMPLRQQASIACEKIKQMKEL 93 (306)
T ss_pred CCCCEEE-ECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc-ccc--------ccCHHHHHHHHHHHHhcchhh
Confidence 3567654 69976555555566555555323 65444444 232110 011 123346667777777764333
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCC--ceeEEEEc
Q 004690 593 TKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAA 626 (736)
Q Consensus 593 d~~ri~~~G~S~GG~la~~~~~~~p~--~~~a~v~~ 626 (736)
++-+-++|+|.||.+.=+++.+.|+ .++-.|..
T Consensus 94 -~~G~naIGfSQGglflRa~ierc~~~p~V~nlISl 128 (306)
T PLN02606 94 -SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSL 128 (306)
T ss_pred -cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEe
Confidence 2468999999999888888877766 25555543
No 427
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=84.68 E-value=13 Score=42.41 Aligned_cols=118 Identities=11% Similarity=0.102 Sum_probs=73.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCee--cccc-cCccceeEEeeCCeEEEEEeCCCCCCceEEEEEc
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV--GKPL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~--~~~~-~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l 268 (736)
++..++|||--...-++...+| .|..||+.--..- ..+. .+....+.|+|++.++-+. +|.-.+.+++.
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG----~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATG----GRDK~vkiWd~ 249 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSG----YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATG----GRDKMVKIWDM 249 (839)
T ss_pred hhhceeeccCCCceEEEecCCc----eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeec----CCCccEEEEec
Confidence 5778899996555555566666 5888898643321 1222 2334567999987443333 23445777788
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCC
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~ 319 (736)
+++............ -...+.|-|+.++.+.++.-.....|++.|+..+
T Consensus 250 t~~~~~~~~tInTia--pv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 250 TDSRAKPKHTINTIA--PVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred cCCCccceeEEeecc--eeeeeeeccCccchhhhhhccccceEEEEeeccc
Confidence 876544443333221 2235789999998877777677778888888764
No 428
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=84.55 E-value=1.2 Score=50.52 Aligned_cols=45 Identities=16% Similarity=0.281 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHc--C--CCC---CCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004690 577 TDFIACAEYLIKN--C--YCT---KEKLCIEGRSAGGLLIGAVLNMRPDLFKA 622 (736)
Q Consensus 577 ~D~~~~~~~l~~~--~--~~d---~~ri~~~G~S~GG~la~~~~~~~p~~~~a 622 (736)
+=+.+|+.++.+. + .-+ |.-|+++||||||.+|-++++. |..+..
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~ 208 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQG 208 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccc
Confidence 4556677777653 1 223 6779999999999888776664 544443
No 429
>PLN02571 triacylglycerol lipase
Probab=84.18 E-value=1.5 Score=46.98 Aligned_cols=40 Identities=15% Similarity=0.085 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
..+++.+.+..|+++..-..-+|.+.|||+||.||..+|.
T Consensus 206 ar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHH
Confidence 3467777777777653211237999999999999987764
No 430
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=84.13 E-value=7.7 Score=43.62 Aligned_cols=56 Identities=18% Similarity=0.192 Sum_probs=38.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC--ccceeEEeeCCeEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALV 250 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~--~~~~~~WspDg~l~ 250 (736)
.+..++|||+|+++|-... | ....+.||+++.-..+..-.+. ....++|+|-++++
T Consensus 80 ~~t~vAfS~~GryvatGEc--G-~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyv 137 (1080)
T KOG1408|consen 80 PLTCVAFSQNGRYVATGEC--G-RTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYV 137 (1080)
T ss_pred ceeEEEEcCCCcEEEeccc--C-CCccceeeeeccccchhhhhhccccceeeeecCCCcEE
Confidence 5788899999999985543 3 2467999999976655432222 23458999999433
No 431
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=83.89 E-value=58 Score=33.90 Aligned_cols=56 Identities=23% Similarity=0.288 Sum_probs=37.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeCCeEEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYIT 253 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspDg~l~y~~ 253 (736)
++..+.+-|-..++|- |+...++.|||+++|+... ++.+ ...+++.|+---.+|..
T Consensus 153 WVr~vavdP~n~wf~t-----gs~DrtikIwDlatg~Lkl-tltGhi~~vr~vavS~rHpYlFs~ 211 (460)
T KOG0285|consen 153 WVRSVAVDPGNEWFAT-----GSADRTIKIWDLATGQLKL-TLTGHIETVRGVAVSKRHPYLFSA 211 (460)
T ss_pred eEEEEeeCCCceeEEe-----cCCCceeEEEEcccCeEEE-eecchhheeeeeeecccCceEEEe
Confidence 4667778888887773 4445789999999998764 3332 23457777766344444
No 432
>PLN02633 palmitoyl protein thioesterase family protein
Probab=83.70 E-value=9.4 Score=39.29 Aligned_cols=102 Identities=17% Similarity=0.113 Sum_probs=61.9
Q ss_pred CCCcEEEEecCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCC
Q 004690 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (736)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (736)
.+.|+|| .||-...+..++.....+.+.+. |.-+..+.+ |.+ . +.+ .-.+..+.+..+.+.|.+....
T Consensus 24 ~~~P~Vi-wHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~-~-----~~s---~~~~~~~Qve~vce~l~~~~~l 92 (314)
T PLN02633 24 VSVPFIM-LHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG-V-----GDS---WLMPLTQQAEIACEKVKQMKEL 92 (314)
T ss_pred CCCCeEE-ecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC-c-----ccc---ceeCHHHHHHHHHHHHhhchhh
Confidence 3567655 69976666555555555555443 666666554 222 1 111 1123446666777777664333
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCC--ceeEEEEcC
Q 004690 593 TKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAV 627 (736)
Q Consensus 593 d~~ri~~~G~S~GG~la~~~~~~~p~--~~~a~v~~~ 627 (736)
++-+-++|+|.||.++=+++.+.|+ .++-.|...
T Consensus 93 -~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlg 128 (314)
T PLN02633 93 -SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLA 128 (314)
T ss_pred -hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEec
Confidence 2468999999999988888887776 366666543
No 433
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=82.55 E-value=41 Score=32.50 Aligned_cols=113 Identities=21% Similarity=0.248 Sum_probs=67.2
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC--ccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~--~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
...+..+.+-|.|++|| .|.+.....++|+.+|..++.-.+. ....+.|||.. .++-.+.| .++.+.
T Consensus 231 ssavaav~vdpsgrll~-----sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd-----~~iklt 300 (350)
T KOG0641|consen 231 SSAVAAVAVDPSGRLLA-----SGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYD-----MKIKLT 300 (350)
T ss_pred cceeEEEEECCCcceee-----eccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEeccc-----ceEEEe
Confidence 45688899999999998 3555567888899999887642221 24558999987 44444433 346666
Q ss_pred EcCCCCCC--cEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEE
Q 004690 267 KLEADQSN--DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL 314 (736)
Q Consensus 267 ~l~t~~~~--~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~ 314 (736)
++..+-.. ...+..|.. .-.+.+.|.|.. +-+++++...+..+|.+
T Consensus 301 dlqgdla~el~~~vv~ehk-dk~i~~rwh~~d-~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 301 DLQGDLAHELPIMVVAEHK-DKAIQCRWHPQD-FSFISSSADKTATLWAL 348 (350)
T ss_pred ecccchhhcCceEEEEecc-CceEEEEecCcc-ceeeeccCcceEEEecc
Confidence 76654332 223333322 223467788764 22344443344455544
No 434
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=82.42 E-value=59 Score=32.92 Aligned_cols=207 Identities=12% Similarity=0.121 Sum_probs=101.7
Q ss_pred EeeEEEC--CC-CCEEEEEEe-CCCCcEEEEEEEECCCCCeecc-cccCc--cceeEEeeCC-e----EEEEEeCCCCCC
Q 004690 193 VGCFQVS--PD-NKLVAYAED-TKGDEIYTVYVIDIETGTPVGK-PLVGV--TASVEWAGNE-A----LVYITMDEILRP 260 (736)
Q Consensus 193 ~~~~~~S--PD-G~~la~~~~-~~G~e~~~l~v~dl~tg~~~~~-~~~~~--~~~~~WspDg-~----l~y~~~~~~~~~ 260 (736)
+-+..|| || +-+||.++- +.-....+|.-.|.++++.+.. .++-. ..-+.|.||. . ++-++.|
T Consensus 47 lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D----- 121 (364)
T KOG0290|consen 47 LYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSD----- 121 (364)
T ss_pred eeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccC-----
Confidence 4455666 44 346676542 2233356777778888888765 23322 3457899997 2 3322222
Q ss_pred ceEEEEEcCCCCC--CcEEEEe-ecCCce---EEEEEEcCCccEEEEEecCcceeEEEEEeCC-CCC-ceEEeeccccce
Q 004690 261 DKAWLHKLEADQS--NDICLYH-EKDDIY---SLGLQASESKKFLFIASESKITRFVFYLDVS-KPE-ELRVLTPRVVGV 332 (736)
Q Consensus 261 ~~v~~~~l~t~~~--~~~~~~~-~~~~~~---~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~-~~~-~~~~l~~~~~~~ 332 (736)
.|.+++++.... +...++. ..+..| ..++.|..=.-.++.+++-.++--||-+... .+. +.+++....+-.
T Consensus 122 -~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~ 200 (364)
T KOG0290|consen 122 -FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVY 200 (364)
T ss_pred -eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCccee
Confidence 355556664321 1111111 111122 2345565533334444554556666655543 121 244444443322
Q ss_pred eEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCC-CceeeeEEEeCCEE-EEEEEeCCeeEEEEEEcCC
Q 004690 333 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFIDHL-AVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 333 ~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~-~~~i~~~~~~~~~l-~~~~~~~g~~~l~v~~l~~ 409 (736)
...|...|..++.....+ +.+-..|+...+..+.+..... ...+..++|.+.-. |+..-.....++.+.++..
T Consensus 201 DIaf~~~s~~~FASvgaD----GSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~ 275 (364)
T KOG0290|consen 201 DIAFLKGSRDVFASVGAD----GSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRV 275 (364)
T ss_pred EEEeccCccceEEEecCC----CcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecC
Confidence 344777666666666655 3455566655433444443322 34556667765322 2223333345566776653
No 435
>PLN02324 triacylglycerol lipase
Probab=82.11 E-value=2 Score=45.98 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
.-+.+.+.+..|+++..-..-+|.+.|||+||.||..+|.
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3456677777777753222247999999999999987764
No 436
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=82.10 E-value=30 Score=36.19 Aligned_cols=148 Identities=12% Similarity=0.185 Sum_probs=76.6
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCC----eecccccC-----ccceeEEeeCCeEEEEEeCCCCCCce
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT----PVGKPLVG-----VTASVEWAGNEALVYITMDEILRPDK 262 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~----~~~~~~~~-----~~~~~~WspDg~l~y~~~~~~~~~~~ 262 (736)
-+..+.+|.+|++|| .|++.....+|.++.-- +.++.+.+ ....++|.-.++++|.... ..+
T Consensus 58 CiNAlqFS~N~~~L~-----SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~----~~~ 128 (609)
T KOG4227|consen 58 CINALQFSHNDRFLA-----SGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGER----WGT 128 (609)
T ss_pred ccceeeeccCCeEEe-----ecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCC----cce
Confidence 477889999999998 45556788888875321 11221111 1223666444477786542 346
Q ss_pred EEEEEcCCCCCCcEEEEeecCCc-eEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccce-eE--EEe
Q 004690 263 AWLHKLEADQSNDICLYHEKDDI-YSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGV-DT--AAS 337 (736)
Q Consensus 263 v~~~~l~t~~~~~~~~~~~~~~~-~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~-~~--~~s 337 (736)
|..|++.+. +.+-++.+.+.. -......+|-...+++.+.. ..|..+|..... ...++.+...+. -| .|.
T Consensus 129 VI~HDiEt~--qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~---~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~ 203 (609)
T KOG4227|consen 129 VIKHDIETK--QSIYVANENNNRGDVYHMDQHPTDNTLIVVTRA---KLVSFIDNRDRQNPISLVLPANSGKNFYTAEFH 203 (609)
T ss_pred eEeeecccc--eeeeeecccCcccceeecccCCCCceEEEEecC---ceEEEEeccCCCCCCceeeecCCCccceeeeec
Confidence 999999987 345566555421 11133446654444333322 234555554432 222232221111 12 255
Q ss_pred eeCCEEEEEEcCCCCC
Q 004690 338 HRGNHFFITRRSDELF 353 (736)
Q Consensus 338 ~dg~~l~~~t~~~~~~ 353 (736)
|---.|+.+.+..+++
T Consensus 204 P~~P~Li~~~~~~~G~ 219 (609)
T KOG4227|consen 204 PETPALILVNSETGGP 219 (609)
T ss_pred CCCceeEEeccccCCC
Confidence 5555566665554433
No 437
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=81.99 E-value=73 Score=33.66 Aligned_cols=117 Identities=15% Similarity=0.202 Sum_probs=59.5
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCe-ecc-ccc-------CccceeEEeeC----Ce--EEEEEeC--C
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGK-PLV-------GVTASVEWAGN----EA--LVYITMD--E 256 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~-~~~-~~~-------~~~~~~~WspD----g~--l~y~~~~--~ 256 (736)
..++|.|||+. |...+.| .|++++. .|.. ... .++ ....++++.|+ +. ++|+..+ .
T Consensus 5 ~~~a~~pdG~l--~v~e~~G----~i~~~~~-~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~ 77 (331)
T PF07995_consen 5 RSMAFLPDGRL--LVAERSG----RIWVVDK-DGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDG 77 (331)
T ss_dssp EEEEEETTSCE--EEEETTT----EEEEEET-TTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSS
T ss_pred eEEEEeCCCcE--EEEeCCc----eEEEEeC-CCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCC
Confidence 35789999976 3455566 5888873 3332 110 111 11345788885 43 4444331 1
Q ss_pred CCCCceEEEEEcCCCC---CCcEEEEee-cC----CceEEEEEEcCCccEEEEEecCcc-----------eeEEEEEeCC
Q 004690 257 ILRPDKAWLHKLEADQ---SNDICLYHE-KD----DIYSLGLQASESKKFLFIASESKI-----------TRFVFYLDVS 317 (736)
Q Consensus 257 ~~~~~~v~~~~l~t~~---~~~~~~~~~-~~----~~~~~~~~~S~Dg~~l~~~~~~~~-----------~~~l~~~dl~ 317 (736)
......|.+..+..+. .....++.. +. ......+.+.||| +|+++..+.. ...|++++.+
T Consensus 78 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d 156 (331)
T PF07995_consen 78 GDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILRIDPD 156 (331)
T ss_dssp SSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEEEETT
T ss_pred CCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEEeccc
Confidence 2233467777765441 112333332 22 2334568899999 7787774422 2368888876
Q ss_pred C
Q 004690 318 K 318 (736)
Q Consensus 318 ~ 318 (736)
+
T Consensus 157 G 157 (331)
T PF07995_consen 157 G 157 (331)
T ss_dssp S
T ss_pred C
Confidence 4
No 438
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=81.42 E-value=4.8 Score=43.95 Aligned_cols=154 Identities=16% Similarity=0.108 Sum_probs=77.1
Q ss_pred CCCCcEEEEecCCCCcCCCC-----------------CCchhHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcCh
Q 004690 513 DGSDPLLLYGYGSYEICNDP-----------------AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 575 (736)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~-----------------~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~ 575 (736)
..+.|+++++.||+|.+... .+...-..|.+.+= ++.+|.+=+.|+.+.-..+.+ ......
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~ad-LvFiDqPvGTGfS~a~~~e~~-~d~~~~ 175 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFAD-LVFIDQPVGTGFSRALGDEKK-KDFEGA 175 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCc-eEEEecCcccCcccccccccc-cchhcc
Confidence 35789999999999875321 11112235555543 555676555555443111111 111222
Q ss_pred HHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEcCCccchhhhccCCCCCCccccc
Q 004690 576 FTDFIACAEYLIK----NCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW 648 (736)
Q Consensus 576 ~~D~~~~~~~l~~----~~~~d~~ri~~~G~S~GG~la~~~~~~~p---~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~ 648 (736)
-+|+..+.+.+.+ ..- .-.+..|+|.|+||+-+..+|..-- ...+..+...++++-.....+ |+.
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r-~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~t~---Pl~---- 247 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYAR-LLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLWTD---PLT---- 247 (498)
T ss_pred chhHHHHHHHHHHHHHHHhh-hcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcccC---hhH----
Confidence 3566666555433 211 1157899999999986655553211 123444444444432211111 211
Q ss_pred cccccccccEEEeecCCCCCCCChHHHHHH
Q 004690 649 EVKAQNYPHILVTAGLNDPRVMYSEPAKFV 678 (736)
Q Consensus 649 ~i~~~~~ppvLi~~G~~D~~Vp~~~~~~~~ 678 (736)
....++|+....+..|..-+.++..++.
T Consensus 248 --~~~~y~~~a~~~~~~~~~l~~e~~~~~~ 275 (498)
T COG2939 248 --QYLTYEPIAAEKGPYDGVLSSEECTKAE 275 (498)
T ss_pred --HHHHhhhhHhhcCCCCCcCcHHHHHHHH
Confidence 1114566666667777666654444433
No 439
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=81.23 E-value=3.8 Score=38.80 Aligned_cols=77 Identities=16% Similarity=0.169 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee-EEEEcCCccchhhhccCCCCCCccccccccccccc
Q 004690 578 DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK-AAVAAVPFVDVLTTMLDPTIPLTTAEWEVKAQNYP 656 (736)
Q Consensus 578 D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~p~~~~-a~v~~~p~~d~~~~~~~~~~p~~~~~~~i~~~~~p 656 (736)
++.+.++-|.... ....++.++|||+|..+++.++.+.+..+. .++..+|=+.... . .++.+ ...
T Consensus 93 ~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~-a---------~~l~~---~~~ 158 (177)
T PF06259_consen 93 RLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDS-A---------SDLGV---PPG 158 (177)
T ss_pred HHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCC-H---------HHcCC---CCC
Confidence 3444444444333 344699999999999999998887443333 3344454332211 0 00001 113
Q ss_pred cEEEeecCCCCC
Q 004690 657 HILVTAGLNDPR 668 (736)
Q Consensus 657 pvLi~~G~~D~~ 668 (736)
.++...+.+|++
T Consensus 159 ~v~a~~a~~D~I 170 (177)
T PF06259_consen 159 HVYAMTAPGDPI 170 (177)
T ss_pred cEEEeeCCCCCc
Confidence 488888888874
No 440
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=81.19 E-value=85 Score=33.91 Aligned_cols=245 Identities=14% Similarity=0.091 Sum_probs=125.3
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-ccc-CccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~-~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
......|+|..+.+...... .+.+.+......... ... ....+++-++++ ++|....+ ...+...+..+
T Consensus 34 ~~v~~~~~g~~~~v~~~~~~----~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~----~~~v~vid~~~ 105 (381)
T COG3391 34 GGVAVNPDGTQVYVANSGSN----DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGD----SNTVSVIDTAT 105 (381)
T ss_pred ceeEEcCccCEEEEEeecCc----eeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCC----CCeEEEEcCcc
Confidence 45678899988766654322 566666653322221 112 123456778888 45444332 22466666443
Q ss_pred CCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeec-cccceeEEEeeeCCEEEEEEcC
Q 004690 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDTAASHRGNHFFITRRS 349 (736)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~t~~ 349 (736)
. ..+....-...-..+.+++|++++++.-.....+.++++|..+.. .....+ ........++++|..+|.....
T Consensus 106 ~----~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~-~~~~~~vG~~P~~~a~~p~g~~vyv~~~~ 180 (381)
T COG3391 106 N----TVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNK-VTATIPVGNTPTGVAVDPDGNKVYVTNSD 180 (381)
T ss_pred c----ceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCe-EEEEEecCCCcceEEECCCCCeEEEEecC
Confidence 2 111111111122367899999999886554456778999988776 222122 2112234588999988777522
Q ss_pred CCCCCcEEEEEeCCCCCceee----EecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeee
Q 004690 350 DELFNSELLACPVDNTSETTV----LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 425 (736)
Q Consensus 350 ~~~~~~~l~~~~~~~~~~~~~----l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~ 425 (736)
...|..++..+....+. .+.....-....+..++..+++.........+.+++... ..+. ....
T Consensus 181 ----~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~--~~v~------~~~~ 248 (381)
T COG3391 181 ----DNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTAT--GNVT------ATDL 248 (381)
T ss_pred ----CCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCC--ceEE------Eecc
Confidence 45788888654211100 122111112224455566666665554323455565542 2111 0101
Q ss_pred cCcccccCCCCcccCcceEEEEeccCCCCcEEEEEECCCCc
Q 004690 426 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (736)
Q Consensus 426 p~~~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~ 466 (736)
+.....-.+...++++..+++..+. ...++..|..+..
T Consensus 249 ~~~~~~~~~v~~~p~g~~~yv~~~~---~~~V~vid~~~~~ 286 (381)
T COG3391 249 PVGSGAPRGVAVDPAGKAAYVANSQ---GGTVSVIDGATDR 286 (381)
T ss_pred ccccCCCCceeECCCCCEEEEEecC---CCeEEEEeCCCCc
Confidence 1111001123445666666554433 7788888877665
No 441
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=80.92 E-value=27 Score=37.75 Aligned_cols=128 Identities=15% Similarity=0.149 Sum_probs=56.3
Q ss_pred EEEEEEECCCCCeecc-cccC---ccceeEEeeC--CeEEEEEeCCCCCCceEEEEEcCCCCC-CcEEEEeec------C
Q 004690 217 YTVYVIDIETGTPVGK-PLVG---VTASVEWAGN--EALVYITMDEILRPDKAWLHKLEADQS-NDICLYHEK------D 283 (736)
Q Consensus 217 ~~l~v~dl~tg~~~~~-~~~~---~~~~~~WspD--g~l~y~~~~~~~~~~~v~~~~l~t~~~-~~~~~~~~~------~ 283 (736)
.+|.+||+.+.+.++. .+.. ..-.+.|..| ..--|+..- -...||++--..+.. +...+.+-+ .
T Consensus 222 ~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~a---Lss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~ 298 (461)
T PF05694_consen 222 HSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCA---LSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGW 298 (461)
T ss_dssp -EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE-----EEEEEEEE-ETTEEEEEEEEEE--EE--SS
T ss_pred CeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEe---ccceEEEEEEcCCCCeeeeEEEECCCcccCcc
Confidence 6899999999988763 3321 2234666655 333343321 123455433211110 011111110 0
Q ss_pred ------------CceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeec----c---------c------cce
Q 004690 284 ------------DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP----R---------V------VGV 332 (736)
Q Consensus 284 ------------~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~----~---------~------~~~ 332 (736)
+....++..|-|.|+|+++..- ..+|..+|+.++..++++-. + . .+.
T Consensus 299 ~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~--~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgP 376 (461)
T PF05694_consen 299 ILPEMLKPFGAVPPLITDILISLDDRFLYVSNWL--HGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGP 376 (461)
T ss_dssp ---GGGGGG-EE------EEE-TTS-EEEEEETT--TTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S--
T ss_pred cccccccccccCCCceEeEEEccCCCEEEEEccc--CCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCC
Confidence 2345678899999999987653 34677778877542332211 0 0 011
Q ss_pred e-EEEeeeCCEEEEEEcC
Q 004690 333 D-TAASHRGNHFFITRRS 349 (736)
Q Consensus 333 ~-~~~s~dg~~l~~~t~~ 349 (736)
+ ..+|.||++||+.+.-
T Consensus 377 qMvqlS~DGkRlYvTnSL 394 (461)
T PF05694_consen 377 QMVQLSLDGKRLYVTNSL 394 (461)
T ss_dssp --EEE-TTSSEEEEE---
T ss_pred CeEEEccCCeEEEEEeec
Confidence 1 3488899999988763
No 442
>PLN02802 triacylglycerol lipase
Probab=80.75 E-value=2.4 Score=46.50 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
+++.+.+..|+++..-..-+|.+.|||+||.||..+|.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 56667777777653212247999999999999877664
No 443
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=80.63 E-value=92 Score=33.94 Aligned_cols=157 Identities=16% Similarity=0.138 Sum_probs=92.9
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccC--ccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~--~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
..+..+...-...+||-..+ +| +|-|..+.++..... .++. ...-+.+||-. .++-+..++. .|-+|
T Consensus 122 stvt~v~YN~~DeyiAsvs~-gG----diiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G----~Vtlw 192 (673)
T KOG4378|consen 122 STVTYVDYNNTDEYIASVSD-GG----DIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKG----AVTLW 192 (673)
T ss_pred ceeEEEEecCCcceeEEecc-CC----cEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCC----eEEEE
Confidence 34556666667777876554 33 478888888775432 3332 23346788888 5555555443 36677
Q ss_pred EcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEE
Q 004690 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFIT 346 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 346 (736)
++.+. ....-+.+....-..++.+||....|+++.. -...|+++|........+|+-..+-....|+++|-.|.+-
T Consensus 193 Dv~g~--sp~~~~~~~HsAP~~gicfspsne~l~vsVG--~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG 268 (673)
T KOG4378|consen 193 DVQGM--SPIFHASEAHSAPCRGICFSPSNEALLVSVG--YDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAG 268 (673)
T ss_pred eccCC--CcccchhhhccCCcCcceecCCccceEEEec--ccceEEEeecccccccceeeecCCcceeeecCCceEEEee
Confidence 77543 2333333333233346789999988887654 3356888888754422333322222233488888766544
Q ss_pred EcCCCCCCcEEEEEeCCCC
Q 004690 347 RRSDELFNSELLACPVDNT 365 (736)
Q Consensus 347 t~~~~~~~~~l~~~~~~~~ 365 (736)
+ .+++|+.+|+...
T Consensus 269 ~-----s~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 269 N-----SKGELIAYDMRST 282 (673)
T ss_pred c-----CCceEEEEecccC
Confidence 3 3578999999763
No 444
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=80.43 E-value=87 Score=33.54 Aligned_cols=115 Identities=12% Similarity=0.159 Sum_probs=64.3
Q ss_pred EEEEcCCccEEEEEecCcceeEEEEEeCCCCC----ceEEeecc-cccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeC
Q 004690 289 GLQASESKKFLFIASESKITRFVFYLDVSKPE----ELRVLTPR-VVGVD-TAASHRGNHFFITRRSDELFNSELLACPV 362 (736)
Q Consensus 289 ~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~----~~~~l~~~-~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~ 362 (736)
+++|++.-.--+++..+...-.+|-+.....+ .++.+..+ ...++ ..|.+-...++.....+ .+|...|+
T Consensus 182 glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd----~~L~iwD~ 257 (422)
T KOG0264|consen 182 GLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDD----GKLMIWDT 257 (422)
T ss_pred ccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCC----CeEEEEEc
Confidence 46777776655555554444444544433321 12333332 22222 23555555566555543 57888887
Q ss_pred CCC-Cc-eeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004690 363 DNT-SE-TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 363 ~~~-~~-~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
... .. ...+..+..++.-..|.+.++.++.....++. |.++++..
T Consensus 258 R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~t--V~LwDlRn 304 (422)
T KOG0264|consen 258 RSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKT--VALWDLRN 304 (422)
T ss_pred CCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCc--EEEeechh
Confidence 641 11 22255566666667788888888877776654 78888863
No 445
>PRK13615 lipoprotein LpqB; Provisional
Probab=80.01 E-value=1.1e+02 Score=34.65 Aligned_cols=157 Identities=10% Similarity=-0.084 Sum_probs=83.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC-ccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~-~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
...+.+|+||+.+|+... . ..+++....+ ..+.. ..+ ....++|.++|.++ +..+.. ...+.... +++
T Consensus 336 ~~s~avS~dg~~~A~v~~-~----~~l~vg~~~~-~~~~~-~~~~~Lt~PS~d~~g~vW-tv~~g~--~~~l~~~~-~~G 404 (557)
T PRK13615 336 ADAATLSADGRQAAVRNA-S----GVWSVGDGDR-DAVLL-DTRPGLVAPSLDAQGYVW-STPASD--PRGLVAWG-PDG 404 (557)
T ss_pred cccceEcCCCceEEEEcC-C----ceEEEecCCC-cceee-ccCCccccCcCcCCCCEE-EEeCCC--ceEEEEec-CCC
Confidence 367899999999999843 1 2577766552 22221 222 24568999888444 333332 22333322 222
Q ss_pred CCCcEEE-EeecCCceEEEEEEcCCccEEEEEecCcceeEEEE--EeCCCCCceEEe-e-c-----cccc-eeEEEeeeC
Q 004690 272 QSNDICL-YHEKDDIYSLGLQASESKKFLFIASESKITRFVFY--LDVSKPEELRVL-T-P-----RVVG-VDTAASHRG 340 (736)
Q Consensus 272 ~~~~~~~-~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~--~dl~~~~~~~~l-~-~-----~~~~-~~~~~s~dg 340 (736)
+...+ ..-....-...+..|+||-.+++.....+...|++ +-..++. ++.| + + .... ....|..+
T Consensus 405 --~~~~v~v~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~-P~~L~~~p~~l~~~l~~v~sl~W~~~- 480 (557)
T PRK13615 405 --VGHPVAVSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGV-PTSLTTTPLELLASPGTPLDATWVDE- 480 (557)
T ss_pred --ceEEeeccccCCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCc-ceEeeeccEEcccCcCcceeeEEcCC-
Confidence 11111 11112233556788999999988776555555665 3223332 3333 2 1 1111 12346554
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCCC
Q 004690 341 NHFFITRRSDELFNSELLACPVDNT 365 (736)
Q Consensus 341 ~~l~~~t~~~~~~~~~l~~~~~~~~ 365 (736)
..|++++... ..+..++.+.+.++
T Consensus 481 ~~laVl~~~~-~~~~~v~~v~v~g~ 504 (557)
T PRK13615 481 LDVATLTLAP-DGERQVELHQVGGP 504 (557)
T ss_pred CEEEEEeccC-CCCceEEEEECCCc
Confidence 4577776544 24567888888764
No 446
>PLN00413 triacylglycerol lipase
Probab=79.83 E-value=2.9 Score=45.44 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
.+..+...++.+.++. ...+|.+.|||+||.||..++.
T Consensus 266 ayy~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3456666666666553 2358999999999999987764
No 447
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=79.57 E-value=4.6 Score=42.65 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=49.8
Q ss_pred hHHHHHHCCcEEEEEcccCCCCCChhhhhccccccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC
Q 004690 537 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 616 (736)
Q Consensus 537 ~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~~ 616 (736)
....|.++|+-|+-+|-- -.-|.+. .-.....|+...+++...+- ...++.++|+|+|+=+.-.+.++-
T Consensus 279 v~~~l~~~gvpVvGvdsL-----RYfW~~r----tPe~~a~Dl~r~i~~y~~~w--~~~~~~liGySfGADvlP~~~n~L 347 (456)
T COG3946 279 VAEALQKQGVPVVGVDSL-----RYFWSER----TPEQIAADLSRLIRFYARRW--GAKRVLLIGYSFGADVLPFAYNRL 347 (456)
T ss_pred HHHHHHHCCCceeeeehh-----hhhhccC----CHHHHHHHHHHHHHHHHHhh--CcceEEEEeecccchhhHHHHHhC
Confidence 456889999999988841 1233321 11234578888888877653 347999999999998777776665
Q ss_pred CCc
Q 004690 617 PDL 619 (736)
Q Consensus 617 p~~ 619 (736)
|..
T Consensus 348 ~~~ 350 (456)
T COG3946 348 PPA 350 (456)
T ss_pred CHH
Confidence 543
No 448
>KOG4328 consensus WD40 protein [Function unknown]
Probab=78.18 E-value=19 Score=38.51 Aligned_cols=155 Identities=13% Similarity=0.137 Sum_probs=88.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cc--cC-ccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL--VG-VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~--~~-~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
.++.+.+||...--.|+.+..| +|+..|++++..... .. .. .++++.++.+. .+++... - + ...++-+
T Consensus 236 ~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~-~-G-~f~~iD~ 308 (498)
T KOG4328|consen 236 PVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDN-V-G-NFNVIDL 308 (498)
T ss_pred cccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeec-c-c-ceEEEEe
Confidence 4788999998887788888777 699999998765432 22 22 25667888887 5555432 1 1 3445555
Q ss_pred EcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC-ce-EEeecccccee-EEEeeeCCEE
Q 004690 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-EL-RVLTPRVVGVD-TAASHRGNHF 343 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~-~~l~~~~~~~~-~~~s~dg~~l 343 (736)
+.+...-+...+... -..+++..|--.+++.+++...+..||-+.--.++ .+ .-..+....+. .+|||.|..
T Consensus 309 R~~~s~~~~~~lh~k----KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt- 383 (498)
T KOG4328|consen 309 RTDGSEYENLRLHKK----KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT- 383 (498)
T ss_pred ecCCccchhhhhhhc----ccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-
Confidence 554432222222211 23367788988898888877666666644322233 11 11223333333 459999998
Q ss_pred EEEEcCCCCCCcEEEEE
Q 004690 344 FITRRSDELFNSELLAC 360 (736)
Q Consensus 344 ~~~t~~~~~~~~~l~~~ 360 (736)
++.+..+ .+.+|+-.
T Consensus 384 l~TT~~D--~~IRv~ds 398 (498)
T KOG4328|consen 384 LLTTCQD--NEIRVFDS 398 (498)
T ss_pred eEeeccC--CceEEeec
Confidence 3333333 24455543
No 449
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=78.18 E-value=24 Score=29.10 Aligned_cols=70 Identities=16% Similarity=0.163 Sum_probs=41.5
Q ss_pred EEEcCCccEEEEEecC---------------cceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEEcCCCCC
Q 004690 290 LQASESKKFLFIASES---------------KITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELF 353 (736)
Q Consensus 290 ~~~S~Dg~~l~~~~~~---------------~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~ 353 (736)
+...+++..|+|+..+ ..+.+|+.+|..+++ .+.+..+..-.. ..+++|++.+++.-..
T Consensus 3 ldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~-~~vl~~~L~fpNGVals~d~~~vlv~Et~---- 77 (89)
T PF03088_consen 3 LDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKE-TTVLLDGLYFPNGVALSPDESFVLVAETG---- 77 (89)
T ss_dssp EEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTE-EEEEEEEESSEEEEEE-TTSSEEEEEEGG----
T ss_pred eeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCe-EEEehhCCCccCeEEEcCCCCEEEEEecc----
Confidence 4556775566776543 224689999999987 666655432211 3488999977776443
Q ss_pred CcEEEEEeCCC
Q 004690 354 NSELLACPVDN 364 (736)
Q Consensus 354 ~~~l~~~~~~~ 364 (736)
..+|.+.-+.+
T Consensus 78 ~~Ri~rywl~G 88 (89)
T PF03088_consen 78 RYRILRYWLKG 88 (89)
T ss_dssp GTEEEEEESSS
T ss_pred CceEEEEEEeC
Confidence 47888887765
No 450
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=77.71 E-value=72 Score=35.43 Aligned_cols=59 Identities=19% Similarity=0.196 Sum_probs=35.4
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC--eEEEEEeCC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE--ALVYITMDE 256 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg--~l~y~~~~~ 256 (736)
..+.+||||+||.-+ |.-..+|.++|++.-...-. .++.-.-.+.-..|+ .+++...|.
T Consensus 55 t~ik~s~DGqY~lAt----G~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR 116 (703)
T KOG2321|consen 55 TRIKVSPDGQYLLAT----GTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDR 116 (703)
T ss_pred ceeEecCCCcEEEEe----cccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCc
Confidence 467899999998643 44467899999986543321 222212223334444 577777654
No 451
>PLN02761 lipase class 3 family protein
Probab=77.30 E-value=3.5 Score=45.35 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHcCC---CCC-CcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCY---CTK-EKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~---~d~-~ri~~~G~S~GG~la~~~~~ 614 (736)
.-+++.+.+..|++... -++ -+|.+.|||+||.||..+|.
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34677777888776531 122 48999999999999987663
No 452
>PLN02753 triacylglycerol lipase
Probab=77.01 E-value=3.6 Score=45.29 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHcCCCC---CCcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCYCT---KEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d---~~ri~~~G~S~GG~la~~~~~ 614 (736)
..+++.+.++-|+++..-+ .-+|.+.|||+||.||..+|.
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4566777777777653221 358999999999999987764
No 453
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=76.88 E-value=81 Score=36.30 Aligned_cols=208 Identities=9% Similarity=-0.044 Sum_probs=104.9
Q ss_pred CceEEeecchhc--------CCCCeEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC--ccceeEE
Q 004690 174 PEHLILDENVKA--------EGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEW 243 (736)
Q Consensus 174 ~~~vllD~n~~~--------~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~--~~~~~~W 243 (736)
+-.++.|.|... ..| .-++..+.|++-.-.|..+-... ..|.+||+....-......+ ....+.|
T Consensus 110 G~i~vWdlnk~~rnk~l~~f~EH-~Rs~~~ldfh~tep~iliSGSQD----g~vK~~DlR~~~S~~t~~~nSESiRDV~f 184 (839)
T KOG0269|consen 110 GVISVWDLNKSIRNKLLTVFNEH-ERSANKLDFHSTEPNILISGSQD----GTVKCWDLRSKKSKSTFRSNSESIRDVKF 184 (839)
T ss_pred CcEEEEecCccccchhhhHhhhh-ccceeeeeeccCCccEEEecCCC----ceEEEEeeecccccccccccchhhhceee
Confidence 446677777621 111 23577888998888887665444 47999999877655432222 2445899
Q ss_pred eeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC--
Q 004690 244 AGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-- 320 (736)
Q Consensus 244 spDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-- 320 (736)
+|-- ..|++..+. + -|.+++|..... -..-+.... ....-+.|+|++.||+-.. +.....|| +..++.
T Consensus 185 sp~~~~~F~s~~ds-G---~lqlWDlRqp~r-~~~k~~AH~-GpV~c~nwhPnr~~lATGG-RDK~vkiW--d~t~~~~~ 255 (839)
T KOG0269|consen 185 SPGYGNKFASIHDS-G---YLQLWDLRQPDR-CEKKLTAHN-GPVLCLNWHPNREWLATGG-RDKMVKIW--DMTDSRAK 255 (839)
T ss_pred ccCCCceEEEecCC-c---eEEEeeccCchh-HHHHhhccc-CceEEEeecCCCceeeecC-CCccEEEE--eccCCCcc
Confidence 9887 444444443 2 256667765411 111121111 2334578999998887543 33334455 444443
Q ss_pred ceEEeeccccceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeC--CEEEEEEEeCC
Q 004690 321 ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGG 398 (736)
Q Consensus 321 ~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--~~l~~~~~~~g 398 (736)
....+.....-....|-|+-.+.+....- .....|.+.|+..|-.....+.+..+ .+.++.|.. ..+.+...+++
T Consensus 256 ~~~tInTiapv~rVkWRP~~~~hLAtcsm--v~dtsV~VWDvrRPYIP~~t~~eH~~-~vt~i~W~~~d~~~l~s~sKD~ 332 (839)
T KOG0269|consen 256 PKHTINTIAPVGRVKWRPARSYHLATCSM--VVDTSVHVWDVRRPYIPYATFLEHTD-SVTGIAWDSGDRINLWSCSKDG 332 (839)
T ss_pred ceeEEeecceeeeeeeccCccchhhhhhc--cccceEEEEeeccccccceeeeccCc-cccceeccCCCceeeEeecCcc
Confidence 11122111111122366655433322222 12466777787653222222322222 355677765 23344444444
No 454
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=76.84 E-value=29 Score=34.23 Aligned_cols=128 Identities=16% Similarity=0.068 Sum_probs=66.2
Q ss_pred EEeeEEECCC---CCEEE-------EEEeCCCCcEEEEEEEECCCCCeecc-cccC---ccceeEEeeCC--eEEEEEeC
Q 004690 192 SVGCFQVSPD---NKLVA-------YAEDTKGDEIYTVYVIDIETGTPVGK-PLVG---VTASVEWAGNE--ALVYITMD 255 (736)
Q Consensus 192 ~~~~~~~SPD---G~~la-------~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~---~~~~~~WspDg--~l~y~~~~ 255 (736)
.+.++.|.|- |..+- +-.- .|+-.+.+.||+.+.++-... ++.+ -...++|.|.- ...++..-
T Consensus 151 GvnsVswapa~~~g~~~~~~~~~~~krlv-SgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~ 229 (299)
T KOG1332|consen 151 GVNSVSWAPASAPGSLVDQGPAAKVKRLV-SGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASC 229 (299)
T ss_pred ccceeeecCcCCCccccccCcccccceee-ccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEe
Confidence 4677788886 62221 0011 233357899999988754332 3433 24568999984 33343332
Q ss_pred CCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEe
Q 004690 256 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 325 (736)
Q Consensus 256 ~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l 325 (736)
..++.--||..+...++ -...++++. +.....++||..|..|++...+ ..-.+|.-++++ + +..+
T Consensus 230 SqDg~viIwt~~~e~e~-wk~tll~~f-~~~~w~vSWS~sGn~LaVs~Gd-Nkvtlwke~~~G-k-w~~v 294 (299)
T KOG1332|consen 230 SQDGTVIIWTKDEEYEP-WKKTLLEEF-PDVVWRVSWSLSGNILAVSGGD-NKVTLWKENVDG-K-WEEV 294 (299)
T ss_pred cCCCcEEEEEecCccCc-ccccccccC-CcceEEEEEeccccEEEEecCC-cEEEEEEeCCCC-c-EEEc
Confidence 22222334444422221 123344432 2233468899999998875433 223455555543 3 5444
No 455
>PLN02934 triacylglycerol lipase
Probab=76.60 E-value=3.8 Score=44.98 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
.+..+...++.+.++.. ..+|.+.|||+||.||..++.
T Consensus 303 Ay~~v~~~lk~ll~~~p--~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 303 AYYAVRSKLKSLLKEHK--NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHHCC--CCeEEEeccccHHHHHHHHHH
Confidence 44567777777776532 258999999999999977763
No 456
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=76.54 E-value=92 Score=31.65 Aligned_cols=119 Identities=12% Similarity=0.024 Sum_probs=72.5
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCC---eEEEEEeCCCCCCceEEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE---ALVYITMDEILRPDKAWL 265 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg---~l~y~~~~~~~~~~~v~~ 265 (736)
.+.+....|-|=..=+ | ..++-..+|.|||..|-+...+ ..++...+-+|||=. .|+-+..+ ..+|.+
T Consensus 101 ky~iss~~WyP~DtGm-F---tssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr----~~~VrL 172 (397)
T KOG4283|consen 101 KYAISSAIWYPIDTGM-F---TSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTR----DVQVRL 172 (397)
T ss_pred eeeeeeeEEeeecCce-e---ecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecC----CCcEEE
Confidence 3456666666522222 1 1244457899999998776543 556655557899887 24443332 345777
Q ss_pred EEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCC
Q 004690 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (736)
Q Consensus 266 ~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~ 319 (736)
-++.++.- .-.+.+.. .-.+.+.|||...|++.+.+..+.-++|-+...+|
T Consensus 173 CDi~SGs~--sH~LsGHr-~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasg 223 (397)
T KOG4283|consen 173 CDIASGSF--SHTLSGHR-DGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASG 223 (397)
T ss_pred EeccCCcc--eeeecccc-CceEEEEeccCceeEEEecCCCceEEEEEeecccc
Confidence 78877632 22333322 23457899999999999887766666666555544
No 457
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=76.46 E-value=85 Score=34.65 Aligned_cols=107 Identities=13% Similarity=0.124 Sum_probs=54.9
Q ss_pred ceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEE----EEeecCCceEEEEEEcCCc------cEEEEEecCc--
Q 004690 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDIC----LYHEKDDIYSLGLQASESK------KFLFIASESK-- 306 (736)
Q Consensus 239 ~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~----~~~~~~~~~~~~~~~S~Dg------~~l~~~~~~~-- 306 (736)
..++|.|||+++++.... -+|++.+-++...+... +.......-.++++++||- ++|++.-...
T Consensus 33 w~maflPDG~llVtER~~----G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~ 108 (454)
T TIGR03606 33 WALLWGPDNQLWVTERAT----GKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNG 108 (454)
T ss_pred eEEEEcCCCeEEEEEecC----CEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCC
Confidence 348999999888776532 24777665443211111 1111112223577888774 4666654221
Q ss_pred -----ceeEEEEEeCCCC--C--ceEEeeccc------cceeEEEeeeCCEEEEEEcCC
Q 004690 307 -----ITRFVFYLDVSKP--E--ELRVLTPRV------VGVDTAASHRGNHFFITRRSD 350 (736)
Q Consensus 307 -----~~~~l~~~dl~~~--~--~~~~l~~~~------~~~~~~~s~dg~~l~~~t~~~ 350 (736)
....|.++.++.. . ..+.|.... .+....|.|||. ||+.+...
T Consensus 109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~-LYVs~GD~ 166 (454)
T TIGR03606 109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGK-IYYTIGEQ 166 (454)
T ss_pred CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCc-EEEEECCC
Confidence 2456777766422 1 123332211 122344888875 88877654
No 458
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=76.37 E-value=14 Score=43.93 Aligned_cols=199 Identities=10% Similarity=0.059 Sum_probs=100.3
Q ss_pred EeeEEECCCCCE----EEEEEeCCCCcEEEEEEEECCC---CCeec-c----cccCccceeEEeeCCe-EEEEEeCCCCC
Q 004690 193 VGCFQVSPDNKL----VAYAEDTKGDEIYTVYVIDIET---GTPVG-K----PLVGVTASVEWAGNEA-LVYITMDEILR 259 (736)
Q Consensus 193 ~~~~~~SPDG~~----la~~~~~~G~e~~~l~v~dl~t---g~~~~-~----~~~~~~~~~~WspDg~-l~y~~~~~~~~ 259 (736)
.....|++-|.. || +|.|.-.|-++|.+. +.... + .-.+.+.++.|.+... ++-...++
T Consensus 67 F~kL~W~~~g~~~~GlIa-----GG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~--- 138 (1049)
T KOG0307|consen 67 FNKLAWGSYGSHSHGLIA-----GGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADD--- 138 (1049)
T ss_pred ceeeeecccCCCccceee-----ccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCC---
Confidence 445688888887 55 455555688888754 22211 1 1233345588998883 54443332
Q ss_pred CceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee---EEE
Q 004690 260 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD---TAA 336 (736)
Q Consensus 260 ~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~---~~~ 336 (736)
.+|+++|+...+. .-..-.-..+.....++|...-.+|+-+.+..+.. .+.|+...+.+..+........ ..|
T Consensus 139 -geI~iWDlnn~~t-P~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~--~iWDlr~~~pii~ls~~~~~~~~S~l~W 214 (1049)
T KOG0307|consen 139 -GEILIWDLNKPET-PFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRA--VIWDLRKKKPIIKLSDTPGRMHCSVLAW 214 (1049)
T ss_pred -CcEEEeccCCcCC-CCCCCCCCCcccceEeccchhhhHHhhccCCCCCc--eeccccCCCcccccccCCCccceeeeee
Confidence 3689999875421 11110111112223456766666666555544444 3445554431222222211122 348
Q ss_pred eeeCC-EEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeC--CEEEEEEEeCCeeEEEEEEcC
Q 004690 337 SHRGN-HFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 408 (736)
Q Consensus 337 s~dg~-~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--~~l~~~~~~~g~~~l~v~~l~ 408 (736)
.|++- +|++.++.+..+...++-+...+ ...+.+..+..+ +..++|.. .++++...++++ +..++..
T Consensus 215 hP~~aTql~~As~dd~~PviqlWDlR~as-sP~k~~~~H~~G--ilslsWc~~D~~lllSsgkD~~--ii~wN~~ 284 (1049)
T KOG0307|consen 215 HPDHATQLLVASGDDSAPVIQLWDLRFAS-SPLKILEGHQRG--ILSLSWCPQDPRLLLSSGKDNR--IICWNPN 284 (1049)
T ss_pred CCCCceeeeeecCCCCCceeEeecccccC-Cchhhhcccccc--eeeeccCCCCchhhhcccCCCC--eeEecCC
Confidence 88764 56666666655544444332222 111223233333 44555544 478877777764 6667665
No 459
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=76.36 E-value=95 Score=34.92 Aligned_cols=130 Identities=16% Similarity=0.180 Sum_probs=77.4
Q ss_pred CCcEEEEEEEECCCCCeecc-cc-cCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEE
Q 004690 213 GDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGL 290 (736)
Q Consensus 213 G~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~ 290 (736)
|++..+|+|++..|++.+.. .. .+....++-.|--=.+.++.|+. -|.+++....-+ -...|++ ...|.+.+
T Consensus 73 GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm----~iKlW~we~~wa-~~qtfeG-H~HyVMqv 146 (794)
T KOG0276|consen 73 GSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDM----TIKLWDWENEWA-CEQTFEG-HEHYVMQV 146 (794)
T ss_pred ecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCcc----EEEEeeccCcee-eeeEEcC-cceEEEEE
Confidence 66678999999999987652 11 22234466667662333444432 244445544322 3456654 45788888
Q ss_pred EEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEE-EeeeCCEEEEEEcCC
Q 004690 291 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSD 350 (736)
Q Consensus 291 ~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~t~~~ 350 (736)
++.|...--+.++.-..+-.||.+-.... -..+.....|+.+. +-+.|+.-|+++..+
T Consensus 147 ~fnPkD~ntFaS~sLDrTVKVWslgs~~~--nfTl~gHekGVN~Vdyy~~gdkpylIsgaD 205 (794)
T KOG0276|consen 147 AFNPKDPNTFASASLDRTVKVWSLGSPHP--NFTLEGHEKGVNCVDYYTGGDKPYLISGAD 205 (794)
T ss_pred EecCCCccceeeeeccccEEEEEcCCCCC--ceeeeccccCcceEEeccCCCcceEEecCC
Confidence 88886655555554444556665533332 33455666777654 557788888888765
No 460
>PLN02162 triacylglycerol lipase
Probab=76.36 E-value=4.2 Score=44.13 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
.+..+...++.+.++. ...+|.+.|||+||.||..++.
T Consensus 260 ay~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 3455666666555442 2358999999999999977643
No 461
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.21 E-value=32 Score=36.32 Aligned_cols=71 Identities=23% Similarity=0.124 Sum_probs=47.3
Q ss_pred ccEEEeecCCCCCCCChHHHHHHHHHHhcCCCCCeEEEEecCCCCcCCCCChHHHHHHHHHHHHHHHHhcCCCCC
Q 004690 656 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 730 (736)
Q Consensus 656 ppvLi~~G~~D~~Vp~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~a~~~~fl~~~l~~~~~ 730 (736)
-+.+.+.+..|.++|..+-+++++..++.|..+..+-+..-+..+|.-..+ ..+.+ ...+|+.........
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p--~~y~~--~~~~Fl~~~~~~~~~ 296 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFP--KTYLK--KCSEFLRSVISSYNL 296 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCc--HHHHH--HHHHHHHhcccccCC
Confidence 346667799999999999999999999998877666665333333432222 22222 367899887654433
No 462
>PLN02310 triacylglycerol lipase
Probab=75.18 E-value=4.5 Score=43.40 Aligned_cols=40 Identities=18% Similarity=0.127 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHHHcCC-CC-CCcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCY-CT-KEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~-~d-~~ri~~~G~S~GG~la~~~~~ 614 (736)
..+.+.+.+..|++... -+ .-+|.+.|||+||.||..+|.
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 34556666776665421 12 248999999999999977764
No 463
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=74.82 E-value=1.6e+02 Score=33.70 Aligned_cols=58 Identities=21% Similarity=0.245 Sum_probs=38.8
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccCc-cceeEEeeCC-eEEEE
Q 004690 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-ALVYI 252 (736)
Q Consensus 190 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~~-~~~~~WspDg-~l~y~ 252 (736)
...+.+++|.-||++|+..-.. | .+.|=.+++..+....+++. .+.+.||+|. .++|-
T Consensus 115 KSvV~SmsWn~dG~kIcIvYeD-G----avIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~ 174 (1189)
T KOG2041|consen 115 KSVVVSMSWNLDGTKICIVYED-G----AVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALFK 174 (1189)
T ss_pred ccEEEEEEEcCCCcEEEEEEcc-C----CEEEEeeccceecchhcchheccceeecccHHHHHhh
Confidence 3457889999999999887653 3 25555566655544444443 4568999998 55553
No 464
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=73.52 E-value=6.1 Score=42.03 Aligned_cols=106 Identities=24% Similarity=0.202 Sum_probs=74.6
Q ss_pred CCcEEEEecCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC---ChhhhhccccccCcChHHHHHHHHHHHHHcCC
Q 004690 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL---GRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 591 (736)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~---g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 591 (736)
..|+|++.-| |+....+... +...|++ ..-+.+.+|-.+++ +..|.. ..-.+...|...+++.|+.-.
T Consensus 62 drPtV~~T~G-Y~~~~~p~r~-Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~----Lti~QAA~D~Hri~~A~K~iY- 132 (448)
T PF05576_consen 62 DRPTVLYTEG-YNVSTSPRRS-EPTQLLD--GNQLSVEHRFFGPSRPEPADWSY----LTIWQAASDQHRIVQAFKPIY- 132 (448)
T ss_pred CCCeEEEecC-cccccCcccc-chhHhhc--cceEEEEEeeccCCCCCCCCccc----ccHhHhhHHHHHHHHHHHhhc-
Confidence 5799998766 8877666544 3334444 34566677766654 344543 333456788889998886642
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcCCccc
Q 004690 592 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 631 (736)
Q Consensus 592 ~d~~ri~~~G~S~GG~la~~~~~~~p~~~~a~v~~~p~~d 631 (736)
+++-.-.|.|=||..+...=.-+|+-+.+.|+.+...|
T Consensus 133 --~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 133 --PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred --cCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 57899999999998887777778999999998876554
No 465
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=73.48 E-value=4.4 Score=43.78 Aligned_cols=76 Identities=16% Similarity=0.143 Sum_probs=47.5
Q ss_pred CCchhHHHHHHCCcE----EEEEcccCCCCCChhhhhccc-cccCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHH
Q 004690 533 AFNSSRLSLLDRGFI----FAIAQIRGGGELGRQWYENGK-FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGL 607 (736)
Q Consensus 533 ~~~~~~~~l~~~G~~----v~~~d~RG~g~~g~~~~~~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~ 607 (736)
.|....+.|+.-||. ++.+ +..|...-. .......+..+..-+|...+.. .-++|.|++|||||.
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga--------~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l 194 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGA--------PYDWRLSYHNSEERDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGL 194 (473)
T ss_pred HHHHHHHHHHhhCcccCceeecc--------ccchhhccCChhHHHHHHHHHHHHHHHHHHHc--CCCceEEEecCCccH
Confidence 356666778888886 3222 233433111 1112234566666676665542 227999999999999
Q ss_pred HHHHHHHhCCC
Q 004690 608 LIGAVLNMRPD 618 (736)
Q Consensus 608 la~~~~~~~p~ 618 (736)
++...+...++
T Consensus 195 ~~lyFl~w~~~ 205 (473)
T KOG2369|consen 195 YVLYFLKWVEA 205 (473)
T ss_pred HHHHHHhcccc
Confidence 99999887766
No 466
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=73.31 E-value=1.2e+02 Score=31.30 Aligned_cols=139 Identities=15% Similarity=0.174 Sum_probs=67.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccc--cCccceeEEeeCC--eEEEEEeCCCCCCceEEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE--ALVYITMDEILRPDKAWLHK 267 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg--~l~y~~~~~~~~~~~v~~~~ 267 (736)
++..+++ +|.++| .|+..-+|+|+|+.+......-+ .+....+.|.++- .-+....++ .++..++
T Consensus 45 sitavAV--s~~~~a-----SGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdD----G~i~iw~ 113 (362)
T KOG0294|consen 45 SITALAV--SGPYVA-----SGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDD----GHIIIWR 113 (362)
T ss_pred ceeEEEe--cceeEe-----ccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCC----CcEEEEE
Confidence 3444554 566666 24335689999998765543211 2334446676664 122222222 2355555
Q ss_pred cCCCCCCcEEEEee-cCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeec-cccceeEEEeeeCCEEEE
Q 004690 268 LEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDTAASHRGNHFFI 345 (736)
Q Consensus 268 l~t~~~~~~~~~~~-~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~ 345 (736)
.+. -+++-.- .......+++..|.|+ |+++..... -+..+||-.|. ...+.+ ........|++.|+++++
T Consensus 114 ~~~----W~~~~slK~H~~~Vt~lsiHPS~K-LALsVg~D~--~lr~WNLV~Gr-~a~v~~L~~~at~v~w~~~Gd~F~v 185 (362)
T KOG0294|consen 114 VGS----WELLKSLKAHKGQVTDLSIHPSGK-LALSVGGDQ--VLRTWNLVRGR-VAFVLNLKNKATLVSWSPQGDHFVV 185 (362)
T ss_pred cCC----eEEeeeecccccccceeEecCCCc-eEEEEcCCc--eeeeehhhcCc-cceeeccCCcceeeEEcCCCCEEEE
Confidence 542 1111111 1111133567788887 455544332 34455666554 111111 111222458899998877
Q ss_pred EEcC
Q 004690 346 TRRS 349 (736)
Q Consensus 346 ~t~~ 349 (736)
....
T Consensus 186 ~~~~ 189 (362)
T KOG0294|consen 186 SGRN 189 (362)
T ss_pred Eecc
Confidence 7653
No 467
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=73.14 E-value=6.1 Score=37.62 Aligned_cols=81 Identities=17% Similarity=0.221 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh--C----CCceeEEEEcCCccchhhhccCCCCCCcccccc
Q 004690 576 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM--R----PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 649 (736)
Q Consensus 576 ~~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~~--~----p~~~~a~v~~~p~~d~~~~~~~~~~p~~~~~~~ 649 (736)
..++...++...++- -..+|+++|+|.|+.++..++.. . .+.++++|+..-... . ...+.
T Consensus 64 ~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~---~---~~~~~------ 129 (179)
T PF01083_consen 64 VANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR---G---AGQPG------ 129 (179)
T ss_dssp HHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT---B---TTTTT------
T ss_pred HHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc---c---CCccc------
Confidence 455666666555542 22599999999999999988876 1 234666665442211 1 11110
Q ss_pred ccccccccEEEeecCCCCCCC
Q 004690 650 VKAQNYPHILVTAGLNDPRVM 670 (736)
Q Consensus 650 i~~~~~ppvLi~~G~~D~~Vp 670 (736)
+.......++-++-..|.++.
T Consensus 130 ~~~~~~~~~~~~C~~gD~vC~ 150 (179)
T PF01083_consen 130 IPGDYSDRVRSYCNPGDPVCD 150 (179)
T ss_dssp BTCSCGGGEEEE-BTT-GGGG
T ss_pred cCcccccceeEEcCCCCcccC
Confidence 111111237777888888773
No 468
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=73.10 E-value=40 Score=27.83 Aligned_cols=71 Identities=7% Similarity=0.102 Sum_probs=39.3
Q ss_pred eEEeeC-CeEEEEEeCC-------------CCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCc
Q 004690 241 VEWAGN-EALVYITMDE-------------ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK 306 (736)
Q Consensus 241 ~~WspD-g~l~y~~~~~-------------~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~ 306 (736)
+...+| |.|||+-... ....-+|+.++..++ +..++.++- .|--+++.|+|+++|++....
T Consensus 3 ldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~--~~~vl~~~L--~fpNGVals~d~~~vlv~Et~- 77 (89)
T PF03088_consen 3 LDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTK--ETTVLLDGL--YFPNGVALSPDESFVLVAETG- 77 (89)
T ss_dssp EEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTT--EEEEEEEEE--SSEEEEEE-TTSSEEEEEEGG-
T ss_pred eeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCC--eEEEehhCC--CccCeEEEcCCCCEEEEEecc-
Confidence 556677 4787775421 112347999999887 334455443 244478899999999886543
Q ss_pred ceeEEEEEeCC
Q 004690 307 ITRFVFYLDVS 317 (736)
Q Consensus 307 ~~~~l~~~dl~ 317 (736)
..+|..+-++
T Consensus 78 -~~Ri~rywl~ 87 (89)
T PF03088_consen 78 -RYRILRYWLK 87 (89)
T ss_dssp -GTEEEEEESS
T ss_pred -CceEEEEEEe
Confidence 2344444443
No 469
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=72.91 E-value=65 Score=32.58 Aligned_cols=33 Identities=39% Similarity=0.485 Sum_probs=25.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCee
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV 230 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~ 230 (736)
-...+||||+..|||+.+. | +|+++|+.+.+..
T Consensus 46 WRkl~WSpD~tlLa~a~S~-G----~i~vfdl~g~~lf 78 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAEST-G----TIRVFDLMGSELF 78 (282)
T ss_pred heEEEECCCCcEEEEEcCC-C----eEEEEecccceeE
Confidence 3456999999999999873 3 5888899876654
No 470
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=72.87 E-value=36 Score=39.38 Aligned_cols=110 Identities=16% Similarity=0.220 Sum_probs=65.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEE-ECC-CCCeecc-cccC---ccceeEEeeCCeEEEEEeCCCCCCceEEEE
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVI-DIE-TGTPVGK-PLVG---VTASVEWAGNEALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~-dl~-tg~~~~~-~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~v~~~ 266 (736)
+.-.++||.|+++|-+-.+ | +|.+| |.. .+..... .+.. -....+||+||..+|+.. +...+.+|
T Consensus 208 ~t~~~~spn~~~~Aa~d~d-G----rI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG----~E~VLv~W 278 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSD-G----RILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGG----REGVLVLW 278 (792)
T ss_pred ceeEEeccccceEEEeccC-C----cEEEEeccccccccccceEEEecccccceeEEecCCceEeecc----cceEEEEE
Confidence 5667999999999976554 4 26655 444 1222111 2221 245689999996666643 33457889
Q ss_pred EcCCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCC
Q 004690 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~ 318 (736)
.++|+. . ..+..- ......+.+|||+....+... .+.|.++.+.+
T Consensus 279 q~~T~~--k-qfLPRL-gs~I~~i~vS~ds~~~sl~~~---DNqI~li~~~d 323 (792)
T KOG1963|consen 279 QLETGK--K-QFLPRL-GSPILHIVVSPDSDLYSLVLE---DNQIHLIKASD 323 (792)
T ss_pred eecCCC--c-cccccc-CCeeEEEEEcCCCCeEEEEec---CceEEEEeccc
Confidence 999883 2 233222 233457889999987666554 23455555543
No 471
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=72.85 E-value=5.9 Score=40.94 Aligned_cols=111 Identities=13% Similarity=0.172 Sum_probs=64.1
Q ss_pred eeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCe-eccc--ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcC
Q 004690 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKP--LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (736)
Q Consensus 194 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~-~~~~--~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (736)
..++|+| .-.-|++ |+|.+.||.+|...-+. +... ...+.-.+.|||-| .|+-.+.|.+ |.++...
T Consensus 233 N~IswnP--eafnF~~---a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDks-----IRIf~~~ 302 (433)
T KOG0268|consen 233 NTICWNP--EAFNFVA---ANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKS-----IRIFPVN 302 (433)
T ss_pred cceecCc--cccceee---ccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccce-----EEEeecC
Confidence 4678899 3233443 67789999999764322 1111 11234458999999 6765555543 4444544
Q ss_pred CCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCC
Q 004690 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (736)
Q Consensus 270 t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~ 317 (736)
.+- ..-+|....=...+.+.||-|.+||+- .++..+-+||.....
T Consensus 303 ~~~--SRdiYhtkRMq~V~~Vk~S~Dskyi~S-GSdd~nvRlWka~As 347 (433)
T KOG0268|consen 303 HGH--SRDIYHTKRMQHVFCVKYSMDSKYIIS-GSDDGNVRLWKAKAS 347 (433)
T ss_pred CCc--chhhhhHhhhheeeEEEEeccccEEEe-cCCCcceeeeecchh
Confidence 442 233443332233456789999999753 344455577776654
No 472
>PLN02719 triacylglycerol lipase
Probab=72.02 E-value=5.9 Score=43.53 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHcCCC---CCCcEEEEEeChHHHHHHHHHH
Q 004690 575 TFTDFIACAEYLIKNCYC---TKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~---d~~ri~~~G~S~GG~la~~~~~ 614 (736)
..+++.+.+.-|+++..- ..-+|.+.|||+||.||..+|.
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 446677777777765321 1248999999999999987663
No 473
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=71.21 E-value=1.4e+02 Score=31.40 Aligned_cols=124 Identities=15% Similarity=0.078 Sum_probs=61.9
Q ss_pred eeEEeeCCeEEEEEeCC--CCCCceEEEEEcCCCCCCcEEEEeec-----------CCceEEEEEEcCCccEEEEEecCc
Q 004690 240 SVEWAGNEALVYITMDE--ILRPDKAWLHKLEADQSNDICLYHEK-----------DDIYSLGLQASESKKFLFIASESK 306 (736)
Q Consensus 240 ~~~WspDg~l~y~~~~~--~~~~~~v~~~~l~t~~~~~~~~~~~~-----------~~~~~~~~~~S~Dg~~l~~~~~~~ 306 (736)
++++.+||.+++..... ......|+.++......+...+-... ...-+-+++++|||+.|++...+.
T Consensus 89 gi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~ 168 (326)
T PF13449_consen 89 GIAVPPDGSFWISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESP 168 (326)
T ss_pred HeEEecCCCEEEEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECcc
Confidence 47776676666654422 22245688888763321111111110 111134688999999776655331
Q ss_pred ------ce-------eEEEEEeCCC-CC---ceEEeec------cccce-eEEEeeeCCEEEEEEcCC---CCCCcEEEE
Q 004690 307 ------IT-------RFVFYLDVSK-PE---ELRVLTP------RVVGV-DTAASHRGNHFFITRRSD---ELFNSELLA 359 (736)
Q Consensus 307 ------~~-------~~l~~~dl~~-~~---~~~~l~~------~~~~~-~~~~s~dg~~l~~~t~~~---~~~~~~l~~ 359 (736)
.. ..|+.+|..+ +. ....-.. ...++ +..+-++++ |+++-... .....+||.
T Consensus 169 l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~-lLvLER~~~~~~~~~~ri~~ 247 (326)
T PF13449_consen 169 LKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGR-LLVLERDFSPGTGNYKRIYR 247 (326)
T ss_pred ccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCc-EEEEEccCCCCccceEEEEE
Confidence 11 4677778765 22 1111111 11222 233445555 55554431 134568999
Q ss_pred EeCCC
Q 004690 360 CPVDN 364 (736)
Q Consensus 360 ~~~~~ 364 (736)
+++..
T Consensus 248 v~l~~ 252 (326)
T PF13449_consen 248 VDLSD 252 (326)
T ss_pred EEccc
Confidence 99764
No 474
>PRK13613 lipoprotein LpqB; Provisional
Probab=70.95 E-value=1.2e+02 Score=34.91 Aligned_cols=124 Identities=10% Similarity=0.086 Sum_probs=70.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc---cccC-ccceeEEeeCC-eEEEEEeCCCCCCceEEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~---~~~~-~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~ 266 (736)
.+..++|.++| -+++.+........+++..- +|+.... .+.+ ....+.-|+|| +++++...... .+|++-
T Consensus 410 ~Lt~PS~d~~g--~vWtvd~~~~~~~vl~v~~~-~G~~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~--~~v~va 484 (599)
T PRK13613 410 RLTSPSWDGRG--DLWVVDRDPADPRLLWLLQG-DGEPVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGR--RSLQIG 484 (599)
T ss_pred cccCCcCcCCC--CEEEecCCCCCceEEEEEcC-CCcEEEeeccccCCCEeEEEEECCCccEEEEEEecCCC--cEEEEE
Confidence 46778888888 35666543222334666553 5555432 2233 35668999999 88888764222 245544
Q ss_pred EcCCCCCCcEEEEee----cCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 267 KLEADQSNDICLYHE----KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 267 ~l~t~~~~~~~~~~~----~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
.+..+......+-.. ..-.-..+++|..++..+++.....+...+|++++++..
T Consensus 485 ~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~sL~Vlg~~~~~~~~v~~v~vdG~~ 542 (599)
T PRK13613 485 RIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQLVVLGREEGGVQQARYVQVDGST 542 (599)
T ss_pred EEEeCCCCcEEeeccEEeccCCCccceeEEcCCCEEEEEeccCCCCcceEEEecCCcC
Confidence 443322222222210 010113578899998865555444456779999998754
No 475
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=70.91 E-value=1.9e+02 Score=32.97 Aligned_cols=193 Identities=15% Similarity=0.057 Sum_probs=89.3
Q ss_pred EECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCc---cceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004690 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV---TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (736)
Q Consensus 197 ~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~---~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~ 271 (736)
+..|+.+.++-. .+|+ ...|.+..-.+++.... .+.+. ..+++|+.-+ .=+|+.....++--+||+..+++.
T Consensus 152 ~~~~~~~~~lla--~Ggs-~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~ 228 (764)
T KOG1063|consen 152 AALKNNKTFLLA--CGGS-KFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDD 228 (764)
T ss_pred hhhccCCcEEEE--ecCc-ceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCC
Confidence 345555544433 3343 45555554444443322 33332 3447887665 233344434455567887777763
Q ss_pred CCC----c---------------EEEEe-------ecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEe
Q 004690 272 QSN----D---------------ICLYH-------EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 325 (736)
Q Consensus 272 ~~~----~---------------~~~~~-------~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l 325 (736)
..+ + ...|. -...++..++.|+|++..|+-.+.+ .+--+|.-+-.+|- +...
T Consensus 229 ~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaD-ksmiiW~pd~~tGi-Wv~~ 306 (764)
T KOG1063|consen 229 EDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASAD-KSMIIWKPDENTGI-WVDV 306 (764)
T ss_pred ccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccC-cceEEEecCCccce-EEEE
Confidence 220 0 00000 0123455678999999665433332 23334444444443 2221
Q ss_pred e------cccccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceee---EecCCCCceeeeEEEe--CCEEEEE
Q 004690 326 T------PRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQDIQLF--IDHLAVY 393 (736)
Q Consensus 326 ~------~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~---l~~~~~~~~i~~~~~~--~~~l~~~ 393 (736)
. ....|.. ..|+++++.+ +...+. ..+++++ +.+ ...| .+..+.-..+.++.|. ++++ +.
T Consensus 307 vRlGe~gg~a~GF~g~lw~~n~~~i-i~~g~~--Gg~hlWk-t~d---~~~w~~~~~iSGH~~~V~dv~W~psGefl-Ls 378 (764)
T KOG1063|consen 307 VRLGEVGGSAGGFWGGLWSPNSNVI-IAHGRT--GGFHLWK-TKD---KTFWTQEPVISGHVDGVKDVDWDPSGEFL-LS 378 (764)
T ss_pred EEeecccccccceeeEEEcCCCCEE-EEeccc--CcEEEEe-ccC---ccceeeccccccccccceeeeecCCCCEE-EE
Confidence 1 1111221 2388888643 333333 2577877 222 2233 2222222346778877 4443 44
Q ss_pred EEeCCeeEE
Q 004690 394 EREGGLQKI 402 (736)
Q Consensus 394 ~~~~g~~~l 402 (736)
...+...++
T Consensus 379 vs~DQTTRl 387 (764)
T KOG1063|consen 379 VSLDQTTRL 387 (764)
T ss_pred eccccceee
Confidence 444554554
No 476
>PLN03037 lipase class 3 family protein; Provisional
Probab=70.19 E-value=6.2 Score=43.45 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHcCCC--CCCcEEEEEeChHHHHHHHHHH
Q 004690 577 TDFIACAEYLIKNCYC--TKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~--d~~ri~~~G~S~GG~la~~~~~ 614 (736)
+.+.+.+..|++...- ..-+|.|.|||+||.||..+|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 3455555555543211 1247999999999999977763
No 477
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=68.45 E-value=50 Score=33.87 Aligned_cols=104 Identities=13% Similarity=0.191 Sum_probs=60.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCe-ecc-cc---cCccceeEEeeCC-eEEEEEeCCCCCCceEEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGK-PL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~-~~~-~~---~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~ 265 (736)
.+...+|++|++.||.+.. ..+|.|+...+... ... ++ ......+.|+|.+ +|.-...|++ ..||.
T Consensus 12 pitchAwn~drt~iAv~~~-----~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drn---ayVw~ 83 (361)
T KOG1523|consen 12 PITCHAWNSDRTQIAVSPN-----NHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRN---AYVWT 83 (361)
T ss_pred ceeeeeecCCCceEEeccC-----CceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCC---ccccc
Confidence 4667799999999997764 23455555554441 111 22 2235569999999 8876655543 33443
Q ss_pred EEcCCCCC-CcEEEEeecCCceEEEEEEcCCccEEEEEecCc
Q 004690 266 HKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESK 306 (736)
Q Consensus 266 ~~l~t~~~-~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~ 306 (736)
...+.. +.++++-+-+. -...+.|||.+..+++.+...
T Consensus 84 --~~~~~~WkptlvLlRiNr-AAt~V~WsP~enkFAVgSgar 122 (361)
T KOG1523|consen 84 --QPSGGTWKPTLVLLRINR-AATCVKWSPKENKFAVGSGAR 122 (361)
T ss_pred --cCCCCeeccceeEEEecc-ceeeEeecCcCceEEeccCcc
Confidence 322211 23344433332 223578999999888766543
No 478
>PRK13614 lipoprotein LpqB; Provisional
Probab=68.36 E-value=43 Score=38.11 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=50.6
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEE-ECCCCCeeccc--c----cCccceeEEeeCCeEEEEEeCCCCCCceEE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVI-DIETGTPVGKP--L----VGVTASVEWAGNEALVYITMDEILRPDKAW 264 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~-dl~tg~~~~~~--~----~~~~~~~~WspDg~l~y~~~~~~~~~~~v~ 264 (736)
.|..+++|+||-++|.....+|.....|-.+ .-..|+++.+. + .....+++|..|++|+..+.... ...+++
T Consensus 435 ~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W~~~~sl~V~~~~~~-~~~~~~ 513 (573)
T PRK13614 435 TVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGTPRELTAPITLAADSDADTGAWVGDSTVVVTKASAT-SNVVPE 513 (573)
T ss_pred eeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCCeEEccCceecccCCCcceeEEcCCCEEEEEeccCC-CcceEE
Confidence 4889999999999999987777543333222 23456544321 1 12344589999998888765432 344578
Q ss_pred EEEcCCC
Q 004690 265 LHKLEAD 271 (736)
Q Consensus 265 ~~~l~t~ 271 (736)
++.++.+
T Consensus 514 ~v~v~~g 520 (573)
T PRK13614 514 LLSVDAG 520 (573)
T ss_pred EEEeCCC
Confidence 8888544
No 479
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=68.29 E-value=1.9e+02 Score=31.75 Aligned_cols=104 Identities=11% Similarity=0.127 Sum_probs=59.6
Q ss_pred EEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCce
Q 004690 290 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSET 368 (736)
Q Consensus 290 ~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~ 368 (736)
..+.|.| .|++... ....+++|.++.. ...+........ ..++|+|..|++.+..+ ...||+++.++..-.
T Consensus 413 ~~fhpsg-~va~Gt~---~G~w~V~d~e~~~-lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~---~iyiy~Vs~~g~~y~ 484 (626)
T KOG2106|consen 413 ADFHPSG-VVAVGTA---TGRWFVLDTETQD-LVTIHTDNEQLSVVRYSPDGAFLAVGSHDN---HIYIYRVSANGRKYS 484 (626)
T ss_pred eeccCcc-eEEEeec---cceEEEEecccce-eEEEEecCCceEEEEEcCCCCEEEEecCCC---eEEEEEECCCCcEEE
Confidence 4567777 5555432 2356778887754 333333222222 23899999988887654 456777776552211
Q ss_pred ee-EecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEE
Q 004690 369 TV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTY 405 (736)
Q Consensus 369 ~~-l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~ 405 (736)
+. .... ..|..++|+.|.-++.....+..-| .|
T Consensus 485 r~~k~~g---s~ithLDwS~Ds~~~~~~S~d~eiL-yW 518 (626)
T KOG2106|consen 485 RVGKCSG---SPITHLDWSSDSQFLVSNSGDYEIL-YW 518 (626)
T ss_pred EeeeecC---ceeEEeeecCCCceEEeccCceEEE-EE
Confidence 11 1211 4577778888777777766655433 34
No 480
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=68.22 E-value=64 Score=33.29 Aligned_cols=93 Identities=13% Similarity=0.145 Sum_probs=59.6
Q ss_pred EEEEEEEECCCCCeecc-c-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeec--CCceEEEE
Q 004690 216 IYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK--DDIYSLGL 290 (736)
Q Consensus 216 ~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~--~~~~~~~~ 290 (736)
.-.|+|+|+.+++.... . -.+..+.+.+-|+. +++.....+ +.|.+|++.+. .=+.+|.+- ...-.+++
T Consensus 114 ~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD----~svRlwnI~~~--~Cv~VfGG~egHrdeVLSv 187 (385)
T KOG1034|consen 114 LGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKD----HSVRLWNIQTD--VCVAVFGGVEGHRDEVLSV 187 (385)
T ss_pred eeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCC----ceEEEEeccCC--eEEEEecccccccCcEEEE
Confidence 56899999998876542 1 22345668899998 777766533 35888899876 345666543 22346789
Q ss_pred EEcCCccEEEEEecCcceeEEEEEe
Q 004690 291 QASESKKFLFIASESKITRFVFYLD 315 (736)
Q Consensus 291 ~~S~Dg~~l~~~~~~~~~~~l~~~d 315 (736)
.|+.||.+|+- ..-.-.-.+|.++
T Consensus 188 D~~~~gd~i~S-cGmDhslk~W~l~ 211 (385)
T KOG1034|consen 188 DFSLDGDRIAS-CGMDHSLKLWRLN 211 (385)
T ss_pred EEcCCCCeeec-cCCcceEEEEecC
Confidence 99999997642 2222223455554
No 481
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=66.78 E-value=1.2e+02 Score=33.55 Aligned_cols=108 Identities=17% Similarity=0.135 Sum_probs=56.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-ccc--------CccceeEEeeC----C--eEEEEEe---
Q 004690 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV--------GVTASVEWAGN----E--ALVYITM--- 254 (736)
Q Consensus 193 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~--------~~~~~~~WspD----g--~l~y~~~--- 254 (736)
-..+.|.|||+.+ ++....| .|++++..++..... .++ +..-++++.|| . ..+|+..
T Consensus 32 Pw~maflPDG~ll-VtER~~G----~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~ 106 (454)
T TIGR03606 32 PWALLWGPDNQLW-VTERATG----KILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYK 106 (454)
T ss_pred ceEEEEcCCCeEE-EEEecCC----EEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence 4567899999643 4443345 477777666543211 111 11234788876 2 3444443
Q ss_pred CCCC---CCceEEEEEcCCC---CCCcEEEEeecC---CceEEEEEEcCCccEEEEEecCc
Q 004690 255 DEIL---RPDKAWLHKLEAD---QSNDICLYHEKD---DIYSLGLQASESKKFLFIASESK 306 (736)
Q Consensus 255 ~~~~---~~~~v~~~~l~t~---~~~~~~~~~~~~---~~~~~~~~~S~Dg~~l~~~~~~~ 306 (736)
.... ....|.+..+... ..+...++.... ..+.-.+.+.|||+ |+|+..+.
T Consensus 107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~-LYVs~GD~ 166 (454)
T TIGR03606 107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGK-IYYTIGEQ 166 (454)
T ss_pred CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCc-EEEEECCC
Confidence 1111 2356877776532 122344554321 12334577999996 77766554
No 482
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=66.58 E-value=93 Score=34.61 Aligned_cols=159 Identities=11% Similarity=0.115 Sum_probs=83.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-----c---ccC-----ccceeEEeeCC-eEEEEEeCCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----P---LVG-----VTASVEWAGNE-ALVYITMDEI 257 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-----~---~~~-----~~~~~~WspDg-~l~y~~~~~~ 257 (736)
.+..+.++|-+.+||++.. ...+-.||..+.+.... . .++ ..+++.|+.|| .+..-+...
T Consensus 177 ~lN~v~in~~hgLla~Gt~-----~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G- 250 (703)
T KOG2321|consen 177 ELNVVSINEEHGLLACGTE-----DGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTG- 250 (703)
T ss_pred cceeeeecCccceEEeccc-----CceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCC-
Confidence 4667888999999987543 44677888776654321 1 111 14568999999 887755433
Q ss_pred CCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCC-ccEEEEEecCcceeEEEEEeCCCCCceEEeecccccee-EE
Q 004690 258 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES-KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TA 335 (736)
Q Consensus 258 ~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~D-g~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~ 335 (736)
.+++++|.+. ++.++-.....--...+.|-+. +.--+++.. ... +-++|-.+|++...+-+- .++. .-
T Consensus 251 ----~v~iyDLRa~--~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~D-k~~--~kiWd~~~Gk~~asiEpt-~~lND~C 320 (703)
T KOG2321|consen 251 ----SVLIYDLRAS--KPLLVKDHGYELPIKKLDWQDTDQQNKVVSMD-KRI--LKIWDECTGKPMASIEPT-SDLNDFC 320 (703)
T ss_pred ----cEEEEEcccC--CceeecccCCccceeeecccccCCCceEEecc-hHH--hhhcccccCCceeecccc-CCcCcee
Confidence 5899999876 4444433322222334555333 222233322 222 233455555522222221 1111 11
Q ss_pred EeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceee
Q 004690 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 370 (736)
Q Consensus 336 ~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~ 370 (736)
+-|++ -++|+.+.+ +....|.++.-+| ..+|
T Consensus 321 ~~p~s-Gm~f~Ane~--~~m~~yyiP~LGP-aPrW 351 (703)
T KOG2321|consen 321 FVPGS-GMFFTANES--SKMHTYYIPSLGP-APRW 351 (703)
T ss_pred eecCC-ceEEEecCC--CcceeEEccccCC-Cchh
Confidence 23544 477887875 3455666665443 4556
No 483
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=66.32 E-value=1.5e+02 Score=29.94 Aligned_cols=161 Identities=8% Similarity=0.053 Sum_probs=82.0
Q ss_pred CceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eEEEeeeCCEEEEEEcCCCCCCcEEEEEeC
Q 004690 284 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPV 362 (736)
Q Consensus 284 ~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~ 362 (736)
..|.-++.+..|| .|+-++...+.|.|..+|+++++ ...-.+-.... .-.+..-+++||-+|.++ ...+..|.
T Consensus 44 ~aFTQGL~~~~~g-~LyESTG~yG~S~l~~~d~~tg~-~~~~~~l~~~~FgEGit~~~d~l~qLTWk~----~~~f~yd~ 117 (264)
T PF05096_consen 44 TAFTQGLEFLDDG-TLYESTGLYGQSSLRKVDLETGK-VLQSVPLPPRYFGEGITILGDKLYQLTWKE----GTGFVYDP 117 (264)
T ss_dssp T-EEEEEEEEETT-EEEEEECSTTEEEEEEEETTTSS-EEEEEE-TTT--EEEEEEETTEEEEEESSS----SEEEEEET
T ss_pred cccCccEEecCCC-EEEEeCCCCCcEEEEEEECCCCc-EEEEEECCccccceeEEEECCEEEEEEecC----CeEEEEcc
Confidence 3455566665665 46666677788999999999987 33222211111 112555689999999986 46788888
Q ss_pred CCCCceeeEecC-CCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCC-cccC
Q 004690 363 DNTSETTVLIPH-RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFS 440 (736)
Q Consensus 363 ~~~~~~~~l~~~-~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~-~~~~ 440 (736)
++..... -++. .++- +++-+++.++ ..+|..+|+.++... -+. .+.+.....+..+..+| ..+-
T Consensus 118 ~tl~~~~-~~~y~~EGW---GLt~dg~~Li---~SDGS~~L~~~dP~~-f~~------~~~i~V~~~g~pv~~LNELE~i 183 (264)
T PF05096_consen 118 NTLKKIG-TFPYPGEGW---GLTSDGKRLI---MSDGSSRLYFLDPET-FKE------VRTIQVTDNGRPVSNLNELEYI 183 (264)
T ss_dssp TTTEEEE-EEE-SSS-----EEEECSSCEE---EE-SSSEEEEE-TTT--SE------EEEEE-EETTEE---EEEEEEE
T ss_pred ccceEEE-EEecCCcce---EEEcCCCEEE---EECCccceEEECCcc-cce------EEEEEEEECCEECCCcEeEEEE
Confidence 7632222 2221 2222 3344555554 346778888776542 111 12233222111122111 1111
Q ss_pred cceEEEEeccCCCCcEEEEEECCCCcE
Q 004690 441 SRILRFHYSSLRTPPSVYDYDMDMGIS 467 (736)
Q Consensus 441 ~~~~~~~~ss~~~P~~~~~~d~~~~~~ 467 (736)
.+.++... + .-..|.++|+.+|+.
T Consensus 184 ~G~IyANV--W-~td~I~~Idp~tG~V 207 (264)
T PF05096_consen 184 NGKIYANV--W-QTDRIVRIDPETGKV 207 (264)
T ss_dssp TTEEEEEE--T-TSSEEEEEETTT-BE
T ss_pred cCEEEEEe--C-CCCeEEEEeCCCCeE
Confidence 22333322 2 346799999999985
No 484
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=66.14 E-value=26 Score=36.09 Aligned_cols=173 Identities=18% Similarity=0.259 Sum_probs=83.0
Q ss_pred CCCcEEEEEEEECCCCCeecccccC--ccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEE---EEeecCCce
Q 004690 212 KGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDIC---LYHEKDDIY 286 (736)
Q Consensus 212 ~G~e~~~l~v~dl~tg~~~~~~~~~--~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~---~~~~~~~~~ 286 (736)
.|+...++.|||+++|+.+..-+.. ..-.+.++ +|.++-.+.| +.-.|| ++.++. ++. ++-+....
T Consensus 252 sGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~-ng~mvtcSkD---rsiaVW--dm~sps--~it~rrVLvGHrAa- 322 (499)
T KOG0281|consen 252 SGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS-NGYMVTCSKD---RSIAVW--DMASPT--DITLRRVLVGHRAA- 322 (499)
T ss_pred ecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe-CCEEEEecCC---ceeEEE--eccCch--HHHHHHHHhhhhhh-
Confidence 3666789999999999987643322 23346775 3433333322 233444 554431 221 11121111
Q ss_pred EEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccceeEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCC
Q 004690 287 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 366 (736)
Q Consensus 287 ~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~ 366 (736)
+.+ ..-|.|||+-.+++ .+ |-+.+..+++-.+.+.....|+... ...++|++....+ ..|-..++.. +
T Consensus 323 -VNv-Vdfd~kyIVsASgD-RT--ikvW~~st~efvRtl~gHkRGIACl--QYr~rlvVSGSSD----ntIRlwdi~~-G 390 (499)
T KOG0281|consen 323 -VNV-VDFDDKYIVSASGD-RT--IKVWSTSTCEFVRTLNGHKRGIACL--QYRDRLVVSGSSD----NTIRLWDIEC-G 390 (499)
T ss_pred -eee-eccccceEEEecCC-ce--EEEEeccceeeehhhhcccccceeh--hccCeEEEecCCC----ceEEEEeccc-c
Confidence 111 23355665433332 22 4455666665234455555565432 1234566655544 2233444443 2
Q ss_pred ceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004690 367 ETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (736)
Q Consensus 367 ~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (736)
.--.++...++ .+.-+.++.++++ ....+|. +.+|++..
T Consensus 391 ~cLRvLeGHEe-LvRciRFd~krIV-SGaYDGk--ikvWdl~a 429 (499)
T KOG0281|consen 391 ACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVWDLQA 429 (499)
T ss_pred HHHHHHhchHH-hhhheeecCceee-eccccce--EEEEeccc
Confidence 22223333333 3455666665554 4445554 77888874
No 485
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=66.12 E-value=1.9e+02 Score=30.94 Aligned_cols=237 Identities=14% Similarity=0.080 Sum_probs=107.2
Q ss_pred EEEEEECCCCCeecc-cccC-ccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeec--CCceE----EE
Q 004690 218 TVYVIDIETGTPVGK-PLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK--DDIYS----LG 289 (736)
Q Consensus 218 ~l~v~dl~tg~~~~~-~~~~-~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~--~~~~~----~~ 289 (736)
.|+.+|.++|+.+-. ...+ ..+.+.. .++.+++...+ ..|+.++..++. .+++.. .+.+. ..
T Consensus 116 ~l~ald~~tG~~~W~~~~~~~~~~~p~v-~~~~v~v~~~~-----g~l~a~d~~tG~----~~W~~~~~~~~~~~~~~~s 185 (377)
T TIGR03300 116 EVIALDAEDGKELWRAKLSSEVLSPPLV-ANGLVVVRTND-----GRLTALDAATGE----RLWTYSRVTPALTLRGSAS 185 (377)
T ss_pred EEEEEECCCCcEeeeeccCceeecCCEE-ECCEEEEECCC-----CeEEEEEcCCCc----eeeEEccCCCceeecCCCC
Confidence 689999999887632 2222 2222222 23355443322 247777776652 222211 11110 11
Q ss_pred EEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeeccccc---------eeEEEeeeCCEEEEEEcCCCCCCcEEEE
Q 004690 290 LQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG---------VDTAASHRGNHFFITRRSDELFNSELLA 359 (736)
Q Consensus 290 ~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~---------~~~~~s~dg~~l~~~t~~~~~~~~~l~~ 359 (736)
+.. .++ .+++... ...++.+|+.+|+ .++.-.....+ ......-.++.+|+.+.. +.|+.
T Consensus 186 p~~-~~~-~v~~~~~---~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~-----g~l~a 255 (377)
T TIGR03300 186 PVI-ADG-GVLVGFA---GGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQ-----GRVAA 255 (377)
T ss_pred CEE-ECC-EEEEECC---CCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcC-----CEEEE
Confidence 111 133 4444332 2357888888776 22211110000 011111245677776542 46899
Q ss_pred EeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCccc
Q 004690 360 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVF 439 (736)
Q Consensus 360 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~ 439 (736)
+|..+ +...|...... ...+...++.+++.. .+| .++.++... |+.+ |.. . .++... .. +...
T Consensus 256 ~d~~t-G~~~W~~~~~~---~~~p~~~~~~vyv~~-~~G--~l~~~d~~t-G~~~--W~~-~--~~~~~~--~s--sp~i 318 (377)
T TIGR03300 256 LDLRS-GRVLWKRDASS---YQGPAVDDNRLYVTD-ADG--VVVALDRRS-GSEL--WKN-D--ELKYRQ--LT--APAV 318 (377)
T ss_pred EECCC-CcEEEeeccCC---ccCceEeCCEEEEEC-CCC--eEEEEECCC-CcEE--Ecc-c--cccCCc--cc--cCEE
Confidence 99875 45556443221 234456677776654 333 477777653 3311 100 0 111111 11 1112
Q ss_pred CcceEEEEeccCCCCcEEEEEECCCCcEEEEEEeeecC-CCCCCC-ceEEEEEEeCCCCe
Q 004690 440 SSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLG-GFDTNN-YFTERKWASASDGT 497 (736)
Q Consensus 440 ~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~s~dG~ 497 (736)
.++.+++. + .-+.+|.+|..+++..- ..++.. .+.... +.-..+.+.+.||.
T Consensus 319 ~g~~l~~~-~---~~G~l~~~d~~tG~~~~--~~~~~~~~~~~sp~~~~~~l~v~~~dG~ 372 (377)
T TIGR03300 319 VGGYLVVG-D---FEGYLHWLSREDGSFVA--RLKTDGSGIASPPVVVGDGLLVQTRDGD 372 (377)
T ss_pred ECCEEEEE-e---CCCEEEEEECCCCCEEE--EEEcCCCccccCCEEECCEEEEEeCCce
Confidence 33444433 1 23579999988887421 122211 222222 23356777777774
No 486
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=65.21 E-value=87 Score=31.52 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=63.1
Q ss_pred EEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCcc
Q 004690 335 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPL 414 (736)
Q Consensus 335 ~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~ 414 (736)
.|.|+.++|+.++|.. ..|+.++.++ .....++-......++++..++..++... +...+++++.++..+..+
T Consensus 28 Ty~pd~~tLfaV~d~~----~~i~els~~G--~vlr~i~l~g~~D~EgI~y~g~~~~vl~~-Er~~~L~~~~~~~~~~~~ 100 (248)
T PF06977_consen 28 TYNPDTGTLFAVQDEP----GEIYELSLDG--KVLRRIPLDGFGDYEGITYLGNGRYVLSE-ERDQRLYIFTIDDDTTSL 100 (248)
T ss_dssp EEETTTTEEEEEETTT----TEEEEEETT----EEEEEE-SS-SSEEEEEE-STTEEEEEE-TTTTEEEEEEE----TT-
T ss_pred EEcCCCCeEEEEECCC----CEEEEEcCCC--CEEEEEeCCCCCCceeEEEECCCEEEEEE-cCCCcEEEEEEecccccc
Confidence 4788899999999875 4689999865 22223333334467899988876555544 333468888886444322
Q ss_pred ccccCCceee--ecCc-ccccCCCCcccCcceEEEEeccCCCCcEEEEEEC
Q 004690 415 KSLQGGKSVE--FIDP-VYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDM 462 (736)
Q Consensus 415 ~~l~~~~~i~--~p~~-~~~v~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 462 (736)
. ...-+.+. ++.. ...+.++..+...+++++.-. ..|..+|.++.
T Consensus 101 ~-~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE--~~P~~l~~~~~ 148 (248)
T PF06977_consen 101 D-RADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKE--RKPKRLYEVNG 148 (248)
T ss_dssp --EEEEEEEE---S---SS--EEEEEETTTTEEEEEEE--SSSEEEEEEES
T ss_pred c-hhhceEEecccccCCCcceEEEEEcCCCCEEEEEeC--CCChhhEEEcc
Confidence 1 00001122 2210 111234455666677777644 57778998886
No 487
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=64.67 E-value=1.7e+02 Score=29.95 Aligned_cols=71 Identities=13% Similarity=0.152 Sum_probs=47.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCC
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t 270 (736)
.|+.+++||.+..|+.++ ..| .|.++|+.+.+.+.. ......-.-+|.++.+++....+ .+|.++++.+
T Consensus 15 ~IS~v~f~~~~~~LLvss-WDg----slrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~d-----g~vr~~Dln~ 84 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSS-WDG----SLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLD-----GQVRRYDLNT 84 (323)
T ss_pred ceeeEEEcCcCCcEEEEe-ccC----cEEEEeccchhhhhheecCCceeeeeccCCceEEEeccC-----ceEEEEEecC
Confidence 477889999988888766 445 488888877654432 22222333577776677665544 3688999988
Q ss_pred CC
Q 004690 271 DQ 272 (736)
Q Consensus 271 ~~ 272 (736)
++
T Consensus 85 ~~ 86 (323)
T KOG1036|consen 85 GN 86 (323)
T ss_pred Cc
Confidence 74
No 488
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=64.67 E-value=2.1e+02 Score=30.87 Aligned_cols=99 Identities=18% Similarity=0.254 Sum_probs=55.2
Q ss_pred CCCcEEEEEEEECCCCCeecc-c-ccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEcCCC-CCCcEEEEeecCCceE
Q 004690 212 KGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD-QSNDICLYHEKDDIYS 287 (736)
Q Consensus 212 ~G~e~~~l~v~dl~tg~~~~~-~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l~t~-~~~~~~~~~~~~~~~~ 287 (736)
+|+...++.+||+++|+.... + ..+-...+.|.|.. .++.+..- ...|.+.+.... ......-+... .
T Consensus 261 SgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~----D~~V~l~D~R~~~~s~~~wk~~g~----V 332 (463)
T KOG0270|consen 261 SGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSY----DGTVALKDCRDPSNSGKEWKFDGE----V 332 (463)
T ss_pred ecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccc----cceEEeeeccCccccCceEEeccc----e
Confidence 366678999999999998753 2 22335679999998 65554431 123555554421 11111111111 1
Q ss_pred EEEEEcCCccEEEEEecCcceeEEEEEeCCCCC
Q 004690 288 LGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (736)
Q Consensus 288 ~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 320 (736)
-.+.|.+-....++.+.+. ..||.+|+....
T Consensus 333 Ekv~w~~~se~~f~~~tdd--G~v~~~D~R~~~ 363 (463)
T KOG0270|consen 333 EKVAWDPHSENSFFVSTDD--GTVYYFDIRNPG 363 (463)
T ss_pred EEEEecCCCceeEEEecCC--ceEEeeecCCCC
Confidence 1356777666666655333 346777776653
No 489
>PRK13615 lipoprotein LpqB; Provisional
Probab=64.45 E-value=57 Score=37.02 Aligned_cols=79 Identities=18% Similarity=0.207 Sum_probs=50.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-----cc-cC--ccceeEEeeCCeEEEEEeCCCCCCceE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PL-VG--VTASVEWAGNEALVYITMDEILRPDKA 263 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-----~~-~~--~~~~~~WspDg~l~y~~~~~~~~~~~v 263 (736)
.|..+++|+||.++|...+.+|.....|-.+--.++.++.+ .+ .+ ...+++|..|++|+.+.... ....++
T Consensus 418 ~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~P~~L~~~p~~l~~~l~~v~sl~W~~~~~laVl~~~~-~~~~~v 496 (557)
T PRK13615 418 RVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDATWVDELDVATLTLAP-DGERQV 496 (557)
T ss_pred eeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCcceEeeeccEEcccCcCcceeeEEcCCCEEEEEeccC-CCCceE
Confidence 48899999999999999887665444443232244422211 11 11 23458999999888776432 234568
Q ss_pred EEEEcCCC
Q 004690 264 WLHKLEAD 271 (736)
Q Consensus 264 ~~~~l~t~ 271 (736)
+++.++..
T Consensus 497 ~~v~v~g~ 504 (557)
T PRK13615 497 ELHQVGGP 504 (557)
T ss_pred EEEECCCc
Confidence 88888855
No 490
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=64.22 E-value=1.8e+02 Score=29.88 Aligned_cols=176 Identities=18% Similarity=0.183 Sum_probs=0.0
Q ss_pred CCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeecccc-ceeEEEeeeCCEEEEEEcCC
Q 004690 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSD 350 (736)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~ 350 (736)
+..+.++..-.-+..+.++.++.+ ++++...+.+ |.++|..+++.++.+..-.- +..|-|.-.|++.|+.--.+
T Consensus 74 ~t~~~l~~~i~~~~l~~Dv~vse~--yvyvad~ssG---L~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadldd 148 (370)
T COG5276 74 QTHDVLLSVINARDLFADVRVSEE--YVYVADWSSG---LRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDD 148 (370)
T ss_pred ccCcceEEEEehhhhhheeEeccc--EEEEEcCCCc---eEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccC
Q ss_pred CCCCcEEEEEeCCCCCceee-EecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcc
Q 004690 351 ELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV 429 (736)
Q Consensus 351 ~~~~~~l~~~~~~~~~~~~~-l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~ 429 (736)
+ +..+|+.++..... -.-...+..-.++.+++++.++..+++| |.++++..-..+. ......+....
T Consensus 149 g-----fLivdvsdpssP~lagrya~~~~d~~~v~ISGn~AYvA~~d~G---L~ivDVSnp~sPv----li~~~n~g~g~ 216 (370)
T COG5276 149 G-----FLIVDVSDPSSPQLAGRYALPGGDTHDVAISGNYAYVAWRDGG---LTIVDVSNPHSPV----LIGSYNTGPGT 216 (370)
T ss_pred c-----EEEEECCCCCCceeeeeeccCCCCceeEEEecCeEEEEEeCCC---eEEEEccCCCCCe----EEEEEecCCce
Q ss_pred ccc-----CCCCcccCcceEEEEeccCCCCcEEEEEECCC
Q 004690 430 YSI-----DPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 464 (736)
Q Consensus 430 ~~v-----~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~ 464 (736)
+++ ...-...+...+.+..+.+..|..+=.|+.++
T Consensus 217 ~sv~vsdnr~y~vvy~egvlivd~s~~ssp~~~gsyet~~ 256 (370)
T COG5276 217 YSVSVSDNRAYLVVYDEGVLIVDVSGPSSPTVFGSYETSN 256 (370)
T ss_pred EEEEecCCeeEEEEcccceEEEecCCCCCceEeeccccCC
No 491
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=63.84 E-value=9.9 Score=40.27 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004690 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~ri~~~G~S~GG~la~~~~~ 614 (736)
..+.+.++-|+.... .-+|.+.|||+||.||..+|.
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHH
Confidence 466677777776643 358999999999999987765
No 492
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=62.95 E-value=1.2e+02 Score=31.98 Aligned_cols=117 Identities=14% Similarity=0.216 Sum_probs=60.6
Q ss_pred eeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeec-----CCceEEEEEEcCC---ccEEEEEecC------
Q 004690 240 SVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK-----DDIYSLGLQASES---KKFLFIASES------ 305 (736)
Q Consensus 240 ~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~-----~~~~~~~~~~S~D---g~~l~~~~~~------ 305 (736)
.++|.|||+++++.. .-+|++.+..... ...+.... ...-.+++++.|+ ..+|++....
T Consensus 6 ~~a~~pdG~l~v~e~-----~G~i~~~~~~g~~--~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 6 SMAFLPDGRLLVAER-----SGRIWVVDKDGSL--KTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp EEEEETTSCEEEEET-----TTEEEEEETTTEE--CEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred EEEEeCCCcEEEEeC-----CceEEEEeCCCcC--cceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 489999998866543 2358877732221 12222211 1223467888884 3556554432
Q ss_pred cceeEEEEEeCCCC--C--ceEEee---cc-----ccceeEEEeeeCCEEEEEEcCCC---------CCCcEEEEEeCCC
Q 004690 306 KITRFVFYLDVSKP--E--ELRVLT---PR-----VVGVDTAASHRGNHFFITRRSDE---------LFNSELLACPVDN 364 (736)
Q Consensus 306 ~~~~~l~~~dl~~~--~--~~~~l~---~~-----~~~~~~~~s~dg~~l~~~t~~~~---------~~~~~l~~~~~~~ 364 (736)
.....|.++.+..+ . ..+.|. +. ..+....+.||| .||+.+...+ ...++|++++.++
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG 157 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILRIDPDG 157 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEEEETTS
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEEecccC
Confidence 22346666665544 1 122222 11 111224588988 7888876432 2357999999875
No 493
>PLN02847 triacylglycerol lipase
Probab=62.28 E-value=45 Score=37.61 Aligned_cols=20 Identities=30% Similarity=0.247 Sum_probs=16.9
Q ss_pred CcEEEEEeChHHHHHHHHHH
Q 004690 595 EKLCIEGRSAGGLLIGAVLN 614 (736)
Q Consensus 595 ~ri~~~G~S~GG~la~~~~~ 614 (736)
-+|.++|||+||.+|..++.
T Consensus 251 YkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred CeEEEeccChHHHHHHHHHH
Confidence 48999999999998876654
No 494
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=61.49 E-value=2.4e+02 Score=30.49 Aligned_cols=237 Identities=11% Similarity=0.083 Sum_probs=107.5
Q ss_pred EEEEEECCCCCeecc-cccC-ccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeec--CCceE----EE
Q 004690 218 TVYVIDIETGTPVGK-PLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK--DDIYS----LG 289 (736)
Q Consensus 218 ~l~v~dl~tg~~~~~-~~~~-~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~--~~~~~----~~ 289 (736)
.|+.+|.++|+.+-. ...+ ..+.+.-. ++.+++...+ ..|+.++..++. .++... .+... .+
T Consensus 131 ~l~ald~~tG~~~W~~~~~~~~~ssP~v~-~~~v~v~~~~-----g~l~ald~~tG~----~~W~~~~~~~~~~~~~~~s 200 (394)
T PRK11138 131 QVYALNAEDGEVAWQTKVAGEALSRPVVS-DGLVLVHTSN-----GMLQALNESDGA----VKWTVNLDVPSLTLRGESA 200 (394)
T ss_pred EEEEEECCCCCCcccccCCCceecCCEEE-CCEEEEECCC-----CEEEEEEccCCC----EeeeecCCCCcccccCCCC
Confidence 699999999987632 2222 22333332 4455543322 247777776662 222211 11110 11
Q ss_pred EEEcCCccEEEEEecCcceeEEEEEeCCCCC-ceEEeecccc---------ceeEEEeeeCCEEEEEEcCCCCCCcEEEE
Q 004690 290 LQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVV---------GVDTAASHRGNHFFITRRSDELFNSELLA 359 (736)
Q Consensus 290 ~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~---------~~~~~~s~dg~~l~~~t~~~~~~~~~l~~ 359 (736)
+... ++ .+++... ...++.+|..+|+ .++.-..... .+.....-.++.+|+.+.. ..|+.
T Consensus 201 P~v~-~~-~v~~~~~---~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~-----g~l~a 270 (394)
T PRK11138 201 PATA-FG-GAIVGGD---NGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYN-----GNLVA 270 (394)
T ss_pred CEEE-CC-EEEEEcC---CCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcC-----CeEEE
Confidence 1111 22 3444322 2457777887776 2221111000 0011111246777776532 47999
Q ss_pred EeCCCCCceeeEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeecCcccccCCCCccc
Q 004690 360 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVF 439 (736)
Q Consensus 360 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~v~~~~~~~ 439 (736)
+|..+ +...|-.+... ...+...++.+|+... ++ .++.++... |+.+ |.... +... ... +...
T Consensus 271 ld~~t-G~~~W~~~~~~---~~~~~~~~~~vy~~~~-~g--~l~ald~~t-G~~~--W~~~~---~~~~--~~~--sp~v 333 (394)
T PRK11138 271 LDLRS-GQIVWKREYGS---VNDFAVDGGRIYLVDQ-ND--RVYALDTRG-GVEL--WSQSD---LLHR--LLT--APVL 333 (394)
T ss_pred EECCC-CCEEEeecCCC---ccCcEEECCEEEEEcC-CC--eEEEEECCC-CcEE--Ecccc---cCCC--ccc--CCEE
Confidence 99876 34556433221 2234556777776553 33 466666653 3211 11000 0000 111 1111
Q ss_pred CcceEEEEeccCCCCcEEEEEECCCCcEEEEEEeeec-CCCCCCC-ceEEEEEEeCCCCe
Q 004690 440 SSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVL-GGFDTNN-YFTERKWASASDGT 497 (736)
Q Consensus 440 ~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~s~dG~ 497 (736)
.++.+++.- .-+.++.+|..+|+.. ...++. ..+.... +.-.++.+.+.||.
T Consensus 334 ~~g~l~v~~----~~G~l~~ld~~tG~~~--~~~~~~~~~~~s~P~~~~~~l~v~t~~G~ 387 (394)
T PRK11138 334 YNGYLVVGD----SEGYLHWINREDGRFV--AQQKVDSSGFLSEPVVADDKLLIQARDGT 387 (394)
T ss_pred ECCEEEEEe----CCCEEEEEECCCCCEE--EEEEcCCCcceeCCEEECCEEEEEeCCce
Confidence 234554432 2367899999888732 222221 1122222 23346777777774
No 495
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=60.28 E-value=2.3e+02 Score=30.17 Aligned_cols=112 Identities=17% Similarity=0.185 Sum_probs=56.9
Q ss_pred EEcCCccEEEEEecCcceeEEEEEeCCCCCceEEeeccccce-eEEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCcee
Q 004690 291 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT 369 (736)
Q Consensus 291 ~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~~~ 369 (736)
.+-.+..++.+.-..++...+.++....+. .+++.....-+ ...|++|++ +++.+++++ .-++-.++... ....
T Consensus 114 ~~~~~~~sv~v~dkagD~~~~di~s~~~~~-~~~~lGhvSml~dVavS~D~~-~IitaDRDE--kIRvs~ypa~f-~Ies 188 (390)
T KOG3914|consen 114 SFIREDTSVLVADKAGDVYSFDILSADSGR-CEPILGHVSMLLDVAVSPDDQ-FIITADRDE--KIRVSRYPATF-VIES 188 (390)
T ss_pred eeeeccceEEEEeecCCceeeeeecccccC-cchhhhhhhhhheeeecCCCC-EEEEecCCc--eEEEEecCccc-chhh
Confidence 333444454444333333333333333232 33443332221 234899885 666777763 33444433211 1223
Q ss_pred eEecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCC
Q 004690 370 VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (736)
Q Consensus 370 ~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~ 412 (736)
+.+.+.+ .+..++...++++++. .|...|++|++.. |+
T Consensus 189 fclGH~e--FVS~isl~~~~~LlS~--sGD~tlr~Wd~~s-gk 226 (390)
T KOG3914|consen 189 FCLGHKE--FVSTISLTDNYLLLSG--SGDKTLRLWDITS-GK 226 (390)
T ss_pred hccccHh--heeeeeeccCceeeec--CCCCcEEEEeccc-CC
Confidence 4554543 4568888888885554 4556799999874 44
No 496
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=60.09 E-value=1.5e+02 Score=30.89 Aligned_cols=74 Identities=20% Similarity=0.227 Sum_probs=43.4
Q ss_pred EEEECCCCCeecccccCccceeEEeeCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeecCCceEEEEEEcCCccEE
Q 004690 220 YVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFL 299 (736)
Q Consensus 220 ~v~dl~tg~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l 299 (736)
.++|+.+++.+..-+. ...++.|- ||+|++.-.. ..+++..+..++. .+.+..-+ .+--++.|- |+++
T Consensus 188 ~vidv~s~evl~~GLs-mPhSPRWh-dgrLwvldsg----tGev~~vD~~~G~--~e~Va~vp--G~~rGL~f~--G~ll 255 (335)
T TIGR03032 188 CVIDIPSGEVVASGLS-MPHSPRWY-QGKLWLLNSG----RGELGYVDPQAGK--FQPVAFLP--GFTRGLAFA--GDFA 255 (335)
T ss_pred EEEEeCCCCEEEcCcc-CCcCCcEe-CCeEEEEECC----CCEEEEEcCCCCc--EEEEEECC--CCCccccee--CCEE
Confidence 5689999887653222 12348895 6678776432 2358888877663 33343222 233356666 8888
Q ss_pred EEEecC
Q 004690 300 FIASES 305 (736)
Q Consensus 300 ~~~~~~ 305 (736)
++..+.
T Consensus 256 vVgmSk 261 (335)
T TIGR03032 256 FVGLSK 261 (335)
T ss_pred EEEecc
Confidence 876643
No 497
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=60.04 E-value=21 Score=41.25 Aligned_cols=53 Identities=17% Similarity=0.148 Sum_probs=39.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecc-cccCccceeEEeeCCeE
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEAL 249 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~l 249 (736)
.+....||+||.+|. .|+....+.+|.++|++..-+ .+....-.+.||||+.+
T Consensus 253 ~V~~L~fS~~G~~Ll-----SGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~ 306 (792)
T KOG1963|consen 253 EVNSLSFSSDGAYLL-----SGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDL 306 (792)
T ss_pred ccceeEEecCCceEe-----ecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCe
Confidence 478889999998886 354567899999999884433 44455566899999943
No 498
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=58.63 E-value=99 Score=34.34 Aligned_cols=99 Identities=19% Similarity=0.194 Sum_probs=58.9
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeecccccC---ccceeEEeeC--C--eEEEEEeCCCCCCceE
Q 004690 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGN--E--ALVYITMDEILRPDKA 263 (736)
Q Consensus 191 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~~~~~~---~~~~~~WspD--g--~l~y~~~~~~~~~~~v 263 (736)
-.+.+..+||||+.++... .+|.++|+++++.+. ++++ ..+.++|.-+ | .-++.+.+...+...+
T Consensus 145 ~~~~sl~is~D~~~l~~as-------~~ik~~~~~~kevv~-~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~ 216 (541)
T KOG4547|consen 145 PLVSSLCISPDGKILLTAS-------RQIKVLDIETKEVVI-TFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITV 216 (541)
T ss_pred CccceEEEcCCCCEEEecc-------ceEEEEEccCceEEE-EecCCCcceEEEEEEEeccccccceeeeccccccceeE
Confidence 3467889999999887443 479999999999876 3333 2445666544 4 3455555555555566
Q ss_pred EEEEcCCCCCCcEEEEeecCCceEEEEEEcCCcc
Q 004690 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKK 297 (736)
Q Consensus 264 ~~~~l~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~ 297 (736)
|..+-.....+....+..++.....+-....|+.
T Consensus 217 w~v~~~~kkks~~~sl~~~dipv~~ds~~~ed~~ 250 (541)
T KOG4547|consen 217 WVVEKEDKKKSLSCSLTVPDIPVTSDSGLLEDGT 250 (541)
T ss_pred EEEEcccccchhheeeccCCCCeEeccccccccc
Confidence 7665533333334445445544443433445554
No 499
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=58.52 E-value=1.9e+02 Score=28.30 Aligned_cols=133 Identities=13% Similarity=0.149 Sum_probs=67.9
Q ss_pred EEEEEECCCCCeecc-cccC-ccceeE-EeeCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEEeec-CCceEEEEEE
Q 004690 218 TVYVIDIETGTPVGK-PLVG-VTASVE-WAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK-DDIYSLGLQA 292 (736)
Q Consensus 218 ~l~v~dl~tg~~~~~-~~~~-~~~~~~-WspDg-~l~y~~~~~~~~~~~v~~~~l~t~~~~~~~~~~~~-~~~~~~~~~~ 292 (736)
+|..+|+.+|+.+-. .+.. ..+.+. -.+++ .++.. . ....|+.+++.++ + +++.-. ...+...+
T Consensus 4 ~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~-~----~~~~l~~~d~~tG--~--~~W~~~~~~~~~~~~-- 72 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVA-S----GDGNLYALDAKTG--K--VLWRFDLPGPISGAP-- 72 (238)
T ss_dssp EEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEE-E----TTSEEEEEETTTS--E--EEEEEECSSCGGSGE--
T ss_pred EEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEE-c----CCCEEEEEECCCC--C--EEEEeecccccccee--
Confidence 577888877776532 2221 222221 23344 55554 2 2346888888776 2 233221 11111112
Q ss_pred cCCccEEEEEecCcceeEEEEEeCCCCC-ceE-Eeeccc-ccee--EEEeeeCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004690 293 SESKKFLFIASESKITRFVFYLDVSKPE-ELR-VLTPRV-VGVD--TAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (736)
Q Consensus 293 S~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~-~l~~~~-~~~~--~~~s~dg~~l~~~t~~~~~~~~~l~~~~~~~~~~ 367 (736)
..++..|++...+ ..|+.+|+.+|+ .++ ...... .... .....+++.+++... +..|+.+|+.+ +.
T Consensus 73 ~~~~~~v~v~~~~---~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~l~~~d~~t-G~ 143 (238)
T PF13360_consen 73 VVDGGRVYVGTSD---GSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTS-----SGKLVALDPKT-GK 143 (238)
T ss_dssp EEETTEEEEEETT---SEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEET-----CSEEEEEETTT-TE
T ss_pred eecccccccccce---eeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEec-----cCcEEEEecCC-Cc
Confidence 2234445554422 278999988887 344 222211 1111 123445888877765 35799999876 34
Q ss_pred eee
Q 004690 368 TTV 370 (736)
Q Consensus 368 ~~~ 370 (736)
..|
T Consensus 144 ~~w 146 (238)
T PF13360_consen 144 LLW 146 (238)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 500
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=58.25 E-value=1.5e+02 Score=33.20 Aligned_cols=114 Identities=12% Similarity=0.111 Sum_probs=70.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCcEEEEEEEECCCCCeec-c-cccCccceeEEeeCC-eEEEEEeCCCCCCceEEEEEc
Q 004690 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-K-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (736)
Q Consensus 192 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~tg~~~~-~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~v~~~~l 268 (736)
.+..+.|.-+|.|||-+.-.+| ...+.|.+|.....+. . ...+..-.+.|.|-. +++..+.. .|..+++
T Consensus 523 ~i~~vtWHrkGDYlatV~~~~~--~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~------~vRiYdL 594 (733)
T KOG0650|consen 523 SIRQVTWHRKGDYLATVMPDSG--NKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR------SVRIYDL 594 (733)
T ss_pred ccceeeeecCCceEEEeccCCC--cceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEecc------ceEEEeh
Confidence 4678889999999999888777 4678888887655432 1 123344557888888 55554432 2666676
Q ss_pred CCCCCCcEEEEeecCCceEEEEEEcCCccEEEEEecCcceeEEEEEeCCCC
Q 004690 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (736)
Q Consensus 269 ~t~~~~~~~~~~~~~~~~~~~~~~S~Dg~~l~~~~~~~~~~~l~~~dl~~~ 319 (736)
-.... ...+. ....+.-+++.+|.|..|++.+.+. .+...|++-+
T Consensus 595 ~kqel-vKkL~--tg~kwiS~msihp~GDnli~gs~d~---k~~WfDldls 639 (733)
T KOG0650|consen 595 SKQEL-VKKLL--TGSKWISSMSIHPNGDNLILGSYDK---KMCWFDLDLS 639 (733)
T ss_pred hHHHH-HHHHh--cCCeeeeeeeecCCCCeEEEecCCC---eeEEEEcccC
Confidence 54311 11122 2234555677899999988876543 3445555443
Done!