Query 004691
Match_columns 736
No_of_seqs 332 out of 1984
Neff 6.7
Searched_HMMs 46136
Date Thu Mar 28 11:17:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004691.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004691hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02638 cellulose synthase A 100.0 1E-171 2E-176 1487.9 55.3 711 3-730 253-1056(1079)
2 PLN02436 cellulose synthase A 100.0 4E-171 8E-176 1477.3 58.8 710 3-730 269-1071(1094)
3 PLN02400 cellulose synthase 100.0 2E-171 5E-176 1485.5 55.2 710 4-730 261-1061(1085)
4 PLN02195 cellulose synthase A 100.0 6E-171 1E-175 1471.3 57.8 711 2-730 155-952 (977)
5 PLN02189 cellulose synthase 100.0 6E-171 1E-175 1477.5 56.6 711 2-730 234-1017(1040)
6 PLN02190 cellulose synthase-li 100.0 5E-170 1E-174 1438.4 57.0 704 1-731 5-755 (756)
7 PLN02893 Cellulose synthase-li 100.0 2E-169 5E-174 1441.3 61.6 702 2-735 9-733 (734)
8 PLN02915 cellulose synthase A 100.0 2E-169 5E-174 1464.8 59.1 712 3-730 191-1021(1044)
9 PLN02248 cellulose synthase-li 100.0 2E-169 5E-174 1466.2 57.1 716 4-730 267-1115(1135)
10 PF03552 Cellulose_synt: Cellu 100.0 9E-157 2E-161 1327.4 39.9 622 97-730 1-703 (720)
11 PRK11498 bcsA cellulose syntha 100.0 1.4E-73 3E-78 672.6 53.5 487 22-713 188-686 (852)
12 TIGR03030 CelA cellulose synth 100.0 4.4E-73 9.5E-78 671.0 55.5 508 20-714 56-574 (713)
13 PRK05454 glucosyltransferase M 100.0 1.1E-38 2.3E-43 372.6 54.9 360 19-545 40-420 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 1.5E-35 3.3E-40 334.5 41.4 230 91-501 71-306 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 1.4E-36 3.1E-41 318.3 25.7 242 97-497 1-253 (254)
16 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 5.1E-34 1.1E-38 321.6 38.2 282 91-553 45-341 (439)
17 COG1215 Glycosyltransferases, 100.0 9.3E-35 2E-39 325.7 31.5 233 94-501 53-290 (439)
18 PRK11204 N-glycosyltransferase 100.0 3E-33 6.5E-38 313.2 42.2 230 91-501 50-285 (420)
19 PRK14716 bacteriophage N4 adso 100.0 1.5E-30 3.3E-35 294.9 39.4 264 92-526 63-355 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 3.5E-30 7.6E-35 264.6 23.1 227 95-495 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 6.8E-30 1.5E-34 261.0 22.9 229 95-499 1-234 (234)
22 PRK11234 nfrB bacteriophage N4 100.0 4.1E-28 9E-33 285.3 36.8 240 87-500 56-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 5.1E-29 1.1E-33 258.1 22.6 231 95-501 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 5.7E-28 1.2E-32 248.2 22.6 229 98-500 1-233 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 1.7E-28 3.6E-33 250.6 9.0 224 95-494 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 99.9 4.3E-26 9.3E-31 252.1 26.8 228 92-496 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 99.9 1.1E-26 2.4E-31 241.9 15.8 171 270-497 64-243 (244)
28 PRK15489 nfrB bacteriophage N4 99.9 1.2E-23 2.6E-28 244.9 37.0 236 91-499 67-341 (703)
29 cd02520 Glucosylceramide_synth 99.9 3.1E-25 6.6E-30 222.7 18.1 193 95-494 1-195 (196)
30 cd04192 GT_2_like_e Subfamily 99.9 3.3E-24 7.3E-29 217.6 21.5 222 99-494 1-229 (229)
31 cd06439 CESA_like_1 CESA_like_ 99.9 3.2E-24 6.9E-29 222.4 21.1 225 91-498 25-251 (251)
32 cd06434 GT2_HAS Hyaluronan syn 99.9 5.9E-24 1.3E-28 217.8 20.4 229 96-497 1-234 (235)
33 COG2943 MdoH Membrane glycosyl 99.9 1.3E-20 2.9E-25 204.9 45.9 203 251-528 214-423 (736)
34 TIGR03469 HonB hopene-associat 99.9 3.6E-22 7.7E-27 221.8 34.2 229 91-492 36-279 (384)
35 cd02525 Succinoglycan_BP_ExoA 99.9 1.7E-20 3.7E-25 192.9 21.7 224 96-500 1-232 (249)
36 cd06438 EpsO_like EpsO protein 99.8 1.3E-19 2.7E-24 179.9 13.1 161 99-371 1-167 (183)
37 cd06436 GlcNAc-1-P_transferase 99.8 4.2E-19 9E-24 177.9 15.6 164 99-371 1-175 (191)
38 PF13632 Glyco_trans_2_3: Glyc 99.8 2E-17 4.3E-22 165.2 16.3 137 286-495 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 3.6E-17 7.7E-22 163.4 16.7 193 95-468 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 2.6E-16 5.6E-21 157.3 17.1 189 98-468 1-195 (201)
41 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.4E-15 3E-20 163.0 18.3 110 98-311 1-110 (299)
42 cd06433 GT_2_WfgS_like WfgS an 99.7 1.4E-15 3E-20 150.4 16.3 186 98-468 1-188 (202)
43 PLN02726 dolichyl-phosphate be 99.7 7E-15 1.5E-19 152.8 20.8 123 93-324 7-129 (243)
44 cd04196 GT_2_like_d Subfamily 99.6 5.2E-15 1.1E-19 148.6 17.1 161 98-371 1-164 (214)
45 cd02522 GT_2_like_a GT_2_like_ 99.6 2.1E-14 4.6E-19 145.5 17.6 178 97-465 1-178 (221)
46 cd06442 DPM1_like DPM1_like re 99.6 4E-14 8.7E-19 143.7 19.5 115 99-325 1-115 (224)
47 cd06913 beta3GnTL1_like Beta 1 99.6 5.2E-14 1.1E-18 143.4 20.0 111 99-311 1-111 (219)
48 cd06420 GT2_Chondriotin_Pol_N 99.6 4.1E-14 8.9E-19 138.9 17.5 107 99-313 1-107 (182)
49 cd04186 GT_2_like_c Subfamily 99.6 2.3E-14 5E-19 137.4 14.9 157 99-468 1-159 (166)
50 PRK10073 putative glycosyl tra 99.6 2.9E-14 6.2E-19 155.4 16.7 109 94-312 5-113 (328)
51 PF13506 Glyco_transf_21: Glyc 99.6 3E-14 6.5E-19 141.5 14.3 153 264-493 15-175 (175)
52 cd04185 GT_2_like_b Subfamily 99.5 2.2E-13 4.8E-18 136.5 17.0 117 99-327 1-117 (202)
53 cd04188 DPG_synthase DPG_synth 99.5 3.9E-13 8.5E-18 136.1 17.9 108 99-313 1-111 (211)
54 cd06423 CESA_like CESA_like is 99.5 9E-14 2E-18 132.6 11.8 160 99-371 1-166 (180)
55 PRK10063 putative glycosyl tra 99.5 8.2E-13 1.8E-17 138.4 19.1 48 95-146 1-49 (248)
56 PRK10018 putative glycosyl tra 99.5 4.8E-13 1E-17 142.5 17.3 109 93-310 3-111 (279)
57 cd02526 GT2_RfbF_like RfbF is 99.5 1.3E-13 2.9E-18 141.3 12.3 139 251-468 49-198 (237)
58 PF03142 Chitin_synth_2: Chiti 99.5 9.9E-12 2.1E-16 141.2 27.8 166 282-500 200-379 (527)
59 PF00535 Glycos_transf_2: Glyc 99.5 1.1E-13 2.3E-18 132.0 7.2 163 98-371 1-165 (169)
60 PTZ00260 dolichyl-phosphate be 99.4 1.6E-11 3.5E-16 134.1 24.6 129 92-324 67-201 (333)
61 cd04179 DPM_DPG-synthase_like 99.4 1.8E-12 3.9E-17 127.5 13.3 120 99-329 1-120 (185)
62 TIGR01556 rhamnosyltran L-rham 99.3 2.8E-11 6E-16 128.5 13.8 144 250-468 46-195 (281)
63 cd04187 DPM1_like_bac Bacteria 99.3 8.4E-11 1.8E-15 115.9 14.4 51 250-310 56-106 (181)
64 PRK13915 putative glucosyl-3-p 99.2 5E-11 1.1E-15 128.8 12.1 124 92-323 28-152 (306)
65 PRK10714 undecaprenyl phosphat 99.2 1.6E-09 3.4E-14 118.2 23.6 110 94-310 5-116 (325)
66 PF10111 Glyco_tranf_2_2: Glyc 99.2 7.4E-10 1.6E-14 118.2 17.9 134 265-468 74-216 (281)
67 cd00761 Glyco_tranf_GTA_type G 99.2 7.6E-10 1.6E-14 102.8 14.6 113 99-324 1-114 (156)
68 KOG2571 Chitin synthase/hyalur 99.1 1.6E-09 3.6E-14 127.3 17.4 169 265-495 424-597 (862)
69 COG1216 Predicted glycosyltran 99.1 4.2E-09 9.2E-14 113.6 17.9 121 94-326 2-123 (305)
70 COG0463 WcaA Glycosyltransfera 98.8 2.8E-08 6.1E-13 95.2 11.9 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 98.8 3.5E-08 7.5E-13 101.8 12.5 44 264-312 56-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.7 1.3E-07 2.8E-12 101.1 11.9 162 252-493 146-314 (431)
73 KOG2978 Dolichol-phosphate man 98.3 4.5E-05 9.7E-10 75.1 16.5 60 250-323 64-123 (238)
74 KOG2977 Glycosyltransferase [G 98.0 3.2E-05 6.9E-10 80.7 10.7 43 264-310 142-186 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.7 0.00033 7.2E-09 76.5 13.4 43 97-143 2-44 (334)
76 KOG3737 Predicted polypeptide 96.3 0.015 3.2E-07 63.3 8.9 49 91-142 151-199 (603)
77 KOG3738 Predicted polypeptide 96.0 0.018 3.8E-07 63.0 7.4 50 92-144 121-170 (559)
78 PF02364 Glucan_synthase: 1,3- 96.0 0.17 3.6E-06 60.9 16.1 76 444-524 408-484 (817)
79 KOG3736 Polypeptide N-acetylga 95.0 0.024 5.2E-07 65.9 4.7 113 92-310 139-252 (578)
80 PF13704 Glyco_tranf_2_4: Glyc 94.8 0.094 2E-06 46.4 7.0 35 107-146 1-35 (97)
81 PF13712 Glyco_tranf_2_5: Glyc 94.3 0.14 3E-06 52.8 7.8 49 265-321 40-89 (217)
82 TIGR02460 osmo_MPGsynth mannos 91.9 1.1 2.4E-05 48.8 10.2 43 264-309 141-183 (381)
83 PRK14503 mannosyl-3-phosphogly 91.5 1.2 2.7E-05 48.7 10.2 43 264-309 142-184 (393)
84 PF09488 Osmo_MPGsynth: Mannos 90.6 1.5 3.2E-05 48.1 9.6 43 264-309 141-183 (381)
85 COG4092 Predicted glycosyltran 88.1 5.9 0.00013 41.8 11.5 80 248-330 61-141 (346)
86 PRK14502 bifunctional mannosyl 87.8 3.1 6.8E-05 49.7 10.6 43 264-309 146-188 (694)
87 PF03452 Anp1: Anp1; InterPro 86.9 9.5 0.00021 40.7 12.6 54 92-149 22-77 (269)
88 PF03071 GNT-I: GNT-I family; 86.2 5.6 0.00012 45.2 11.0 48 92-144 90-138 (434)
89 KOG0916 1,3-beta-glucan syntha 82.7 2 4.4E-05 54.0 5.9 87 444-535 1172-1259(1679)
90 PF01644 Chitin_synth_1: Chiti 81.5 38 0.00082 33.5 13.2 54 250-309 110-163 (163)
91 cd00899 b4GalT Beta-4-Galactos 80.7 7.8 0.00017 40.1 8.6 53 447-499 138-200 (219)
92 PRK09382 ispDF bifunctional 2- 55.2 29 0.00063 39.0 6.8 40 267-310 83-122 (378)
93 TIGR03584 PseF pseudaminic aci 55.0 98 0.0021 31.9 10.3 60 264-323 75-134 (222)
94 PF05679 CHGN: Chondroitin N-a 54.2 1.5E+02 0.0033 34.6 12.8 48 250-305 315-362 (499)
95 PF13896 Glyco_transf_49: Glyc 49.2 22 0.00047 39.0 4.6 46 271-321 119-164 (317)
96 PF02434 Fringe: Fringe-like; 45.7 84 0.0018 33.2 8.2 30 282-313 85-114 (252)
97 PF02709 Glyco_transf_7C: N-te 39.0 24 0.00053 30.3 2.4 22 447-468 46-67 (78)
98 PF11316 Rhamno_transf: Putati 33.6 4.2E+02 0.0092 27.7 11.0 42 267-310 97-140 (234)
99 PF06638 Strabismus: Strabismu 32.8 1.6E+02 0.0035 34.2 8.1 84 648-735 88-183 (505)
100 cd02503 MobA MobA catalyzes th 28.9 1.9E+02 0.0042 28.0 7.3 42 264-309 68-109 (181)
101 PRK02726 molybdopterin-guanine 27.2 2.1E+02 0.0047 28.7 7.4 42 265-310 78-119 (200)
102 cd02540 GT2_GlmU_N_bac N-termi 26.3 2.3E+02 0.005 28.4 7.6 46 264-311 72-117 (229)
103 TIGR03310 matur_ygfJ molybdenu 26.1 1.7E+02 0.0037 28.4 6.4 43 265-310 74-116 (188)
104 PLN03153 hypothetical protein; 25.3 3.3E+02 0.0072 31.9 9.1 30 282-313 209-238 (537)
105 PLN02728 2-C-methyl-D-erythrit 25.2 1.8E+02 0.004 30.7 6.7 42 267-310 103-144 (252)
106 PF06306 CgtA: Beta-1,4-N-acet 24.1 2.1E+02 0.0046 31.5 6.8 35 264-302 159-193 (347)
107 PRK00317 mobA molybdopterin-gu 23.7 1.6E+02 0.0035 29.0 5.7 42 265-310 74-115 (193)
108 cd04182 GT_2_like_f GT_2_like_ 22.9 2.5E+02 0.0054 27.0 6.8 45 264-310 73-117 (186)
109 KOG3814 Signaling protein van 22.7 1.7E+02 0.0038 32.7 5.9 50 684-735 196-245 (531)
110 PF12804 NTP_transf_3: MobA-li 20.9 2.8E+02 0.0061 26.1 6.6 55 264-324 69-124 (160)
No 1
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1e-171 Score=1487.86 Aligned_cols=711 Identities=33% Similarity=0.646 Sum_probs=658.0
Q ss_pred CCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004691 3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
+.+|||++++.++.. .+||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|.|+.||+|++|
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 478899999988873 57999999999999999999999853 3568999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004691 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF 154 (736)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~ 154 (736)
.+++++|.+ +++||.|||||+|+||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998753 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------C
Q 004691 155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE---------Y 217 (736)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------g~---------~ 217 (736)
||+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.++ |+ +
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 9999999999999999999999988 55678888999999999999999999999987522 11 4
Q ss_pred CCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004691 218 GNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (736)
Q Consensus 218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~ 297 (736)
.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++|
T Consensus 489 ~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN 564 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN 564 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence 57899999999999987753 45677899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Ccc
Q 004691 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 376 (736)
Q Consensus 298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~ 376 (736)
||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|+
T Consensus 565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~ 644 (1079)
T PLN02638 565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 644 (1079)
T ss_pred chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 443
Q ss_pred ccc--------------------------c-------------------------------ch-------HhhHhhhcCc
Q 004691 377 HKG--------------------------I-------------------------------DL-------AELKDTFGES 392 (736)
Q Consensus 377 ~~~--------------------------~-------------------------------d~-------~~~~~~~~~~ 392 (736)
... . +. ..++++||+|
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S 724 (1079)
T PLN02638 645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 724 (1079)
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence 210 0 00 1345789999
Q ss_pred hhHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCe
Q 004691 393 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQ 472 (736)
Q Consensus 393 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~ 472 (736)
.+|++|+..+.++.. ....+++++++|+.|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus 725 ~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 802 (1079)
T PLN02638 725 AVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA 802 (1079)
T ss_pred HHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence 999999988875543 234568999999999999999999999999999999999999999999999999999877789
Q ss_pred eeeccCCCHHHHHHHHHHHhccchhhhhhhcCccccC-CCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCC
Q 004691 473 FLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIP 551 (736)
Q Consensus 473 ~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~ 551 (736)
+.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| ++++|.++|+++|++||++|++
T Consensus 803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~ 881 (1079)
T PLN02638 803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF 881 (1079)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999976 3789999999999999999 9999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcc
Q 004691 552 LYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLD 631 (736)
Q Consensus 552 ~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~ 631 (736)
++|.++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.+++++++++++++++++|+++++|.||+|..+
T Consensus 882 i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d 961 (1079)
T PLN02638 882 IIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASD 961 (1079)
T ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccc
Confidence 99999999899999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 004691 632 NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 709 (736)
Q Consensus 632 ~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~ 709 (736)
.+.. ++++|+|+ ++++++|.++++++|++|+++|+++.+.++ .|+++++++|+++|++++++||++||++||
T Consensus 962 ~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~-- 1035 (1079)
T PLN02638 962 EDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ-- 1035 (1079)
T ss_pred cccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence 4432 25899999 999999999999999999999999998755 688999999999999999999999999997
Q ss_pred CCCChhHHHHHHHHHHHHHHh
Q 004691 710 GRISPSAILLSSVFFVTFLFF 730 (736)
Q Consensus 710 ~~~p~~~~~~~~~~~~~~~~~ 730 (736)
+|+|+++++||++|+++|+++
T Consensus 1036 ~r~P~~v~v~s~ll~~~~~l~ 1056 (1079)
T PLN02638 1036 NRTPTIVVVWSILLASIFSLL 1056 (1079)
T ss_pred CCCCeeehHHHHHHHHHHHHH
Confidence 888999999999999999985
No 2
>PLN02436 cellulose synthase A
Probab=100.00 E-value=3.8e-171 Score=1477.33 Aligned_cols=710 Identities=33% Similarity=0.644 Sum_probs=654.7
Q ss_pred CCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004691 3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
+.+|||++++.++.. .+||+++++++++++++|+||+++.. .++.|+|+++++||+||+|+|+|.|+.||+|++|
T Consensus 269 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~----~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R 344 (1094)
T PLN02436 269 GRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPV----NDAYGLWLTSVICEIWFAVSWILDQFPKWYPIER 344 (1094)
T ss_pred cCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----cccHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 377899999988874 46999999999999999999999843 2468999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004691 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF 154 (736)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~ 154 (736)
.+++++|.+ +++||.|||||+|+||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.||++|
T Consensus 345 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 424 (1094)
T PLN02436 345 ETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEF 424 (1094)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------C
Q 004691 155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-GE---------------Y 217 (736)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-g~---------------~ 217 (736)
||+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.+. ++ +
T Consensus 425 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g 504 (1094)
T PLN02436 425 ARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPG 504 (1094)
T ss_pred HHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCC
Confidence 9999999999999999999999988 55667778999999999999999999999998753 21 4
Q ss_pred CCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004691 218 GNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (736)
Q Consensus 218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~ 297 (736)
.+++|||+||||+++++++. |.++.++|+||||+|||||+++||+||||||+++|+|++|||+|||+++||||++|
T Consensus 505 ~~~~dHp~IIqVll~~~~~~----d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiN 580 (1094)
T PLN02436 505 NNVRDHPGMIQVFLGHSGVR----DVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYIN 580 (1094)
T ss_pred CCCCCCccceEEEecCCCCc----ccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccC
Confidence 57899999999999987642 55778899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Ccc
Q 004691 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 376 (736)
Q Consensus 298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~ 376 (736)
||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+
T Consensus 581 ns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp 660 (1094)
T PLN02436 581 NSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP 660 (1094)
T ss_pred chHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 433
Q ss_pred ccc----------------------------------------------------------------cchHhhHhhhcCc
Q 004691 377 HKG----------------------------------------------------------------IDLAELKDTFGES 392 (736)
Q Consensus 377 ~~~----------------------------------------------------------------~d~~~~~~~~~~~ 392 (736)
... .+.++++++||+|
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S 740 (1094)
T PLN02436 661 KKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQS 740 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhccc
Confidence 100 0012355789999
Q ss_pred hhHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCe
Q 004691 393 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQ 472 (736)
Q Consensus 393 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~ 472 (736)
.+|++|+..+..+. +....+++++++|++|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus 741 ~~fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 818 (1094)
T PLN02436 741 PVFVASTLLENGGV--PRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPA 818 (1094)
T ss_pred HHHHHHHHHhhcCC--CCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchh
Confidence 99999999887432 2333567899999999999999999999999999999999999999999999999999877789
Q ss_pred eeeccCCCHHHHHHHHHHHhccchhhhhhhcCccccC-CCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCC
Q 004691 473 FLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIP 551 (736)
Q Consensus 473 ~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~ 551 (736)
+.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|+++||++|+++++|+ ++++|.++|+++|++||++|++
T Consensus 819 F~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G~~ 897 (1094)
T PLN02436 819 FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTGKF 897 (1094)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCe
Confidence 9999999999999999999999999999999999976 3689999999999999999 9999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcc
Q 004691 552 LYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLD 631 (736)
Q Consensus 552 ~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~ 631 (736)
++|.++.+++++|+++|++++++.++|++|+|.++++|||+||+|+|.+++++++++++++++++|+++++|.||+|..+
T Consensus 898 i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d 977 (1094)
T PLN02436 898 IVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAAD 977 (1094)
T ss_pred ecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 004691 632 NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 709 (736)
Q Consensus 632 ~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~ 709 (736)
.+. .+++|+|+ ++++++|+++++++|++|+++|+.+.+.++ .|+.+++++|+++|++++++||++||++| +
T Consensus 978 ~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr--~ 1050 (1094)
T PLN02436 978 DGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK--Q 1050 (1094)
T ss_pred ccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--C
Confidence 432 13678998 899999999999999999999999998755 68999999999999999999999999954 5
Q ss_pred CCCChhHHHHHHHHHHHHHHh
Q 004691 710 GRISPSAILLSSVFFVTFLFF 730 (736)
Q Consensus 710 ~~~p~~~~~~~~~~~~~~~~~ 730 (736)
+|+|+++++||++|+++|+++
T Consensus 1051 ~r~P~~v~v~s~lla~~~~l~ 1071 (1094)
T PLN02436 1051 DRMPTIILVWSILLASILTLL 1071 (1094)
T ss_pred CCCCeeehHHHHHHHHHHHHH
Confidence 699999999999999999985
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=2.3e-171 Score=1485.46 Aligned_cols=710 Identities=32% Similarity=0.640 Sum_probs=655.9
Q ss_pred CCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecccc
Q 004691 4 PLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (736)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (736)
.+|||++++.++.. .+||+++++++++++++++||+++..+ ++.|+|+++++||+||+|+|+|.|+.||+|++|.
T Consensus 261 ~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 336 (1085)
T PLN02400 261 RLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVK----DAYGLWLTSVICEIWFALSWLLDQFPKWYPINRE 336 (1085)
T ss_pred cCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccccce
Confidence 68899999988873 579999999999999999999998532 4689999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhh
Q 004691 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFA 155 (736)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a 155 (736)
+++++|.+ +++||.|||||||+||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.||++||
T Consensus 337 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA 416 (1085)
T PLN02400 337 TYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFA 416 (1085)
T ss_pred eCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99998853 24699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------CC
Q 004691 156 KWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVE-------DGE---------YG 218 (736)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~-------~g~---------~~ 218 (736)
|+||||||||+|||||||+||+.+ ++.+++.+|+|++||++||++|||||+|||.+.+ +|+ +.
T Consensus 417 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~ 496 (1085)
T PLN02400 417 RKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGN 496 (1085)
T ss_pred HhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCC
Confidence 999999999999999999999988 5556788899999999999999999999999852 221 45
Q ss_pred CCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004691 219 NSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (736)
Q Consensus 219 ~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~ 298 (736)
+++|||+||||+++++++. |.++.++|+||||+|||||+++||+||||||+++|+|++|||+|||+++||||++||
T Consensus 497 ~~~dHp~iIqVll~~~~~~----d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nn 572 (1085)
T PLN02400 497 NPRDHPGMIQVFLGHSGGL----DTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNN 572 (1085)
T ss_pred CCCCCchhhhhhhcCCCCc----ccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCC
Confidence 7899999999999997752 456778999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cccc
Q 004691 299 PTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKH 377 (736)
Q Consensus 299 p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~ 377 (736)
|++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|.||+|||+|+||||+|||+|||| .|..
T Consensus 573 s~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~ 652 (1085)
T PLN02400 573 SKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVL 652 (1085)
T ss_pred chhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 4420
Q ss_pred c-----c---------------------------------------------------------cchHhhHhhhcCchhH
Q 004691 378 K-----G---------------------------------------------------------IDLAELKDTFGESNLF 395 (736)
Q Consensus 378 ~-----~---------------------------------------------------------~d~~~~~~~~~~~~~~ 395 (736)
. . .+.++++++||+|.+|
T Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~f 732 (1085)
T PLN02400 653 TEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVF 732 (1085)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHH
Confidence 0 0 0012356799999999
Q ss_pred HHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeee
Q 004691 396 IKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLG 475 (736)
Q Consensus 396 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g 475 (736)
++|+..+..+ .+....+++++++|++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|
T Consensus 733 i~S~~~~~~~--~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~G 810 (1085)
T PLN02400 733 IAATFMEQGG--IPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKG 810 (1085)
T ss_pred HHHHHHHhcC--CCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcC
Confidence 9999855422 23334568899999999999999999999999999999999999999999999999999987889999
Q ss_pred ccCCCHHHHHHHHHHHhccchhhhhhhcCccccC-CCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCccc
Q 004691 476 TSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYP 554 (736)
Q Consensus 476 ~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~ 554 (736)
+||+|+.+++.||+|||+|++||+++|+||+++| .++|+++||++|+++++|| ++++|.++|+++|++||++|++++|
T Consensus 811 lAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG~~i~P 889 (1085)
T PLN02400 811 SAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITNKFIIP 889 (1085)
T ss_pred cCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCccCC
Confidence 9999999999999999999999999999999976 4789999999999999999 9999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhh
Q 004691 555 EVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQ 634 (736)
Q Consensus 555 ~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~ 634 (736)
.++.+++++|+++++++++++++|++|+|.++++|||+||+|+|.+++++++++++++++++|+++++|.||+|..+.+.
T Consensus 890 ~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~ 969 (1085)
T PLN02400 890 EISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDG 969 (1085)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876433
Q ss_pred hhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 004691 635 VKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRI 712 (736)
Q Consensus 635 ~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~ 712 (736)
. .+++|+|+ ++++++|+++++++|++|+++|+++++.++ .|+.+++++|+++|++++++||++||++|+ +|+
T Consensus 970 ~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~--~r~ 1043 (1085)
T PLN02400 970 D---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ--NRT 1043 (1085)
T ss_pred c---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC--CCC
Confidence 1 25899999 999999999999999999999999998755 689999999999999999999999999887 899
Q ss_pred ChhHHHHHHHHHHHHHHh
Q 004691 713 SPSAILLSSVFFVTFLFF 730 (736)
Q Consensus 713 p~~~~~~~~~~~~~~~~~ 730 (736)
|+++++||++|+++|+++
T Consensus 1044 P~~v~~~s~lla~~~~l~ 1061 (1085)
T PLN02400 1044 PTIVIVWSILLASIFSLL 1061 (1085)
T ss_pred ceeHHHHHHHHHHHHHHH
Confidence 999999999999999985
No 4
>PLN02195 cellulose synthase A
Probab=100.00 E-value=5.9e-171 Score=1471.29 Aligned_cols=711 Identities=34% Similarity=0.639 Sum_probs=655.7
Q ss_pred CCCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecc
Q 004691 2 ESPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (736)
Q Consensus 2 ~~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 80 (736)
|..+|||++++.++.. .+||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++
T Consensus 155 ~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~ 230 (977)
T PLN02195 155 DAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPV----DSAFGLWLTSVICEIWFAFSWVLDQFPKWSPIN 230 (977)
T ss_pred cccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcc----ccchHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 3468899999988874 46999999999999999999998843 345699999999999999999999999999999
Q ss_pred ccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHH
Q 004691 81 RTVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFR 153 (736)
Q Consensus 81 r~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~ 153 (736)
|.+++++|.+ +++||.|||||+|+||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.||++
T Consensus 231 R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~ 310 (977)
T PLN02195 231 RETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAE 310 (977)
T ss_pred ceECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHH
Confidence 9999998753 246999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------
Q 004691 154 FAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-GE--------------- 216 (736)
Q Consensus 154 ~a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-g~--------------- 216 (736)
|||+||||||||+|||||||+||+.+ ++.+++.+|+|++||++||++|||||+|||.+.++ ++
T Consensus 311 FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~ 390 (977)
T PLN02195 311 FARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWP 390 (977)
T ss_pred HHHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCC
Confidence 99999999999999999999999988 44557778999999999999999999999998654 21
Q ss_pred CCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004691 217 YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 296 (736)
Q Consensus 217 ~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~ 296 (736)
+.+++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++
T Consensus 391 g~~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~ 466 (977)
T PLN02195 391 GNNTRDHPGMIQVFLGETGA----RDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYV 466 (977)
T ss_pred CCCCCCCcchhhhhccCCCC----cccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCcccc
Confidence 45789999999999987764 35567789999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cc
Q 004691 297 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 375 (736)
Q Consensus 297 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~ 375 (736)
|+|++++++||||+||+.++++||||+||+|+|.+++|+|++++++||+++++|+||+|||+||||||+|||+|||| .|
T Consensus 467 n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p 546 (977)
T PLN02195 467 NNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGP 546 (977)
T ss_pred CcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999 54
Q ss_pred ccc---------------------cc---------------------------c---------hHhhHhhhcCchhHHHh
Q 004691 376 KHK---------------------GI---------------------------D---------LAELKDTFGESNLFIKS 398 (736)
Q Consensus 376 ~~~---------------------~~---------------------------d---------~~~~~~~~~~~~~~~~s 398 (736)
... +. | ..+++++||+|.+|++|
T Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S 626 (977)
T PLN02195 547 PSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIES 626 (977)
T ss_pred cccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHH
Confidence 321 00 0 01355689999999999
Q ss_pred hhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccC
Q 004691 399 LHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST 478 (736)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP 478 (736)
+..+..+... ...+.+++++|+.|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||
T Consensus 627 ~~~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP 704 (977)
T PLN02195 627 TLMENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAP 704 (977)
T ss_pred HHHHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCC
Confidence 9887755433 23467899999999999999999999999999999999999999999999999999987789999999
Q ss_pred CCHHHHHHHHHHHhccchhhhhhhcCccccCC--CCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCccccc
Q 004691 479 TNLNDVLIQGTRWASGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEV 556 (736)
Q Consensus 479 ~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~--~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~ 556 (736)
+|+.+++.||+|||+|++|++++|+||+++|. ++|+++||++|+++++|+ ++++|.++|+++|++||++|++++|.+
T Consensus 705 ~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~v 783 (977)
T PLN02195 705 INLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPTL 783 (977)
T ss_pred CCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecccc
Confidence 99999999999999999999999999999763 789999999999999999 999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhh
Q 004691 557 SSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVK 636 (736)
Q Consensus 557 ~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~ 636 (736)
+.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.+++++++++++++++++|+++++|.||+|..++++
T Consensus 784 s~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~-- 861 (977)
T PLN02195 784 SNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTE-- 861 (977)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccc--
Confidence 998999999999999999999999999999999999999999999999999999999999999999999999876432
Q ss_pred hccccceeeeccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCh
Q 004691 637 RYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISP 714 (736)
Q Consensus 637 ~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~ 714 (736)
..++|+|+ ++++++|.++++++|++|+++|+++.+.++ .|+.+++++++++|++++++||++||++|| +|+|+
T Consensus 862 --~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~ 936 (977)
T PLN02195 862 --FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTPT 936 (977)
T ss_pred --hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCe
Confidence 23688998 999999999999999999999999998755 688999999999999999999999999997 88899
Q ss_pred hHHHHHHHHHHHHHHh
Q 004691 715 SAILLSSVFFVTFLFF 730 (736)
Q Consensus 715 ~~~~~~~~~~~~~~~~ 730 (736)
++++||++|+++|+++
T Consensus 937 ~v~v~s~ll~~~~~l~ 952 (977)
T PLN02195 937 IVVLWSVLLASVFSLV 952 (977)
T ss_pred eehHHHHHHHHHHHHH
Confidence 9999999999999985
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=6.4e-171 Score=1477.48 Aligned_cols=711 Identities=33% Similarity=0.646 Sum_probs=656.0
Q ss_pred CCCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecc
Q 004691 2 ESPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (736)
Q Consensus 2 ~~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 80 (736)
++.+|||++++.++.. .+||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|.|+.||+|++
T Consensus 234 ~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~ 309 (1040)
T PLN02189 234 EARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPV----HDAIGLWLTSIICEIWFAVSWILDQFPKWFPID 309 (1040)
T ss_pred cCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcC----ccchHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 3478899999988874 46999999999999999999998843 245899999999999999999999999999999
Q ss_pred ccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHH
Q 004691 81 RTVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFR 153 (736)
Q Consensus 81 r~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~ 153 (736)
|.+++++|.+ +++||.|||||||+||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.||++
T Consensus 310 R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~ 389 (1040)
T PLN02189 310 RETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAE 389 (1040)
T ss_pred ceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHH
Confidence 9999998853 234999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-C------C---------
Q 004691 154 FAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-G------E--------- 216 (736)
Q Consensus 154 ~a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-g------~--------- 216 (736)
|||+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.++ + +
T Consensus 390 FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~ 469 (1040)
T PLN02189 390 FARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWP 469 (1040)
T ss_pred HHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCC
Confidence 99999999999999999999999988 55678888999999999999999999999987521 1 1
Q ss_pred CCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004691 217 YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 296 (736)
Q Consensus 217 ~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~ 296 (736)
+.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++
T Consensus 470 g~~~~dHp~IiQVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~ 545 (1040)
T PLN02189 470 GNNTRDHPGMIQVFLGHSGGH----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYI 545 (1040)
T ss_pred CCCCCCCHHHHHHHhcCCCCc----cccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCcccc
Confidence 457899999999999987753 4567789999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cc
Q 004691 297 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 375 (736)
Q Consensus 297 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~ 375 (736)
|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|
T Consensus 546 Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p 625 (1040)
T PLN02189 546 NNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDP 625 (1040)
T ss_pred CchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 44
Q ss_pred ccc-------------------cc------------------------chHhhHhhhcCchhHHHhhhhhccccccCCcc
Q 004691 376 KHK-------------------GI------------------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 412 (736)
Q Consensus 376 ~~~-------------------~~------------------------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 412 (736)
... .. ...+++++||+|.+|++|+..+..+. +...
T Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~ 703 (1040)
T PLN02189 626 PKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGV--PPSS 703 (1040)
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCC--CCCC
Confidence 311 00 01345678999999999998875332 2333
Q ss_pred chhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHh
Q 004691 413 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (736)
Q Consensus 413 ~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa 492 (736)
.+.+++++|+.|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||+|+.+++.||+||+
T Consensus 704 ~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA 783 (1040)
T PLN02189 704 SPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWA 783 (1040)
T ss_pred CcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHh
Confidence 56789999999999999999999999999999999999999999999999999988789999999999999999999999
Q ss_pred ccchhhhhhhcCccccCC--CCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHHH
Q 004691 493 SGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLS 570 (736)
Q Consensus 493 ~G~~qi~~~~~~pl~~~~--~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~ 570 (736)
+|++||+++|+||++++. ++|++.||++|+++++|+ ++++|.++|+++|++||++|++++|.++.+++++|+.++++
T Consensus 784 ~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~ 862 (1040)
T PLN02189 784 LGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMS 862 (1040)
T ss_pred hhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHH
Confidence 999999999999999763 679999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccch
Q 004691 571 AICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSV 650 (736)
Q Consensus 571 ~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~ 650 (736)
++++.++|++|+|.+.++|||+||+|+|.+++++++++++++++++|+++++|.||+|..+++.. ++.|+|+ +++
T Consensus 863 ~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~~----~~ly~f~-~s~ 937 (1040)
T PLN02189 863 IFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDEF----GELYAFK-WTT 937 (1040)
T ss_pred HHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccccc----ccceeec-cee
Confidence 99999999999999999999999999999999999999999999999999999999998765431 4899999 999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHHH
Q 004691 651 FLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFL 728 (736)
Q Consensus 651 ~~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~ 728 (736)
+++|.++++++|++|+++|+++.+.++ .|+++++++++++|++++++||++||++|| +|+|+++++||++|+++|+
T Consensus 938 l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~ 1015 (1040)
T PLN02189 938 LLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFS 1015 (1040)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHH
Confidence 999999999999999999999998755 688999999999999999999999999997 8889999999999999999
Q ss_pred Hh
Q 004691 729 FF 730 (736)
Q Consensus 729 ~~ 730 (736)
++
T Consensus 1016 l~ 1017 (1040)
T PLN02189 1016 LL 1017 (1040)
T ss_pred HH
Confidence 85
No 6
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=4.6e-170 Score=1438.39 Aligned_cols=704 Identities=33% Similarity=0.594 Sum_probs=643.0
Q ss_pred CCCCCCceEEeecCchhhHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecc
Q 004691 1 MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (736)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 80 (736)
|.+++|||++++.+++ ++|++.+++++++++|++||+++.++. .+.|+.+++||+|++++|+|+|+.+|+|++
T Consensus 5 ~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~ 77 (756)
T PLN02190 5 SSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-----DTVWLVAFLCESCFSFVWLLITCIKWSPAE 77 (756)
T ss_pred cCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-----cHHHHHHHHHHHHHHHHHHHhccceeeecC
Confidence 3568999999999887 699999999999999999999998654 257899999999999999999999999999
Q ss_pred ccCCCCCCCC-CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhh
Q 004691 81 RTVFPERLPE-DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWI 159 (736)
Q Consensus 81 r~~~~~~l~~-~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~ 159 (736)
|.++|++|++ -+++|+||||||||||++|||++++||++|++++|||.||+.|||+|||++++|+++|.||++|||+||
T Consensus 78 r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 78 YKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 9999999865 246999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC-----CCCCCCCcccE
Q 004691 160 PFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE-----YGNSRNHSTII 227 (736)
Q Consensus 160 pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------g~-----~~~~~~h~~i~ 227 (736)
||||||+|||||||+||+... ++..+++|++||++||++|||||+|||++... +. +++++|||+||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~--~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~ii 235 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPP--VATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIV 235 (756)
T ss_pred ccccccCCCcCCHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccce
Confidence 999999999999999999742 33345799999999999999999999998421 11 57899999999
Q ss_pred EEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004691 228 EIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 228 ~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (736)
||++|++++ +.++.++|+++||+|||||+++||+||||||+.+|+|++|||+|||+++||||++|||++++++||
T Consensus 236 qVll~~~~~-----~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmC 310 (756)
T PLN02190 236 KVVWENKGG-----VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMC 310 (756)
T ss_pred EEEecCCCC-----ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhh
Confidence 999998653 235678999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCC-CceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cccccc------
Q 004691 308 FHLDPKTS-SSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG------ 379 (736)
Q Consensus 308 ~f~D~~~~-~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~~~------ 379 (736)
||+|++.+ +++||||+||+|+ |+|+|++++||++.+.|.||+|||+|+||||+|||+|||| .|+...
T Consensus 311 f~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~ 385 (756)
T PLN02190 311 IFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLS 385 (756)
T ss_pred hhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccccccc
Confidence 99998644 5899999999998 7899999999999999999999999999999999999999 554321
Q ss_pred -------cchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHH
Q 004691 380 -------IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFT 452 (736)
Q Consensus 380 -------~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t 452 (736)
.+..+.+++||+|++|++|+..+.++...+ ...+++++++|++|++|.||++|+||+++||.|+|+|||+.|
T Consensus 386 ~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~-~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 386 SVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNP-QNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred ccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCC-ccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 112345689999999999998877543322 233568999999999999999999999999999999999999
Q ss_pred HHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhccchhhhhhhcCccccC-CCCCChhHHHHHHhhhHhhHHh
Q 004691 453 GFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLY 531 (736)
Q Consensus 453 ~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~ 531 (736)
|++||++||||+||+++++++.|.+|+++.+.+.||+||++|++|++++|+||++.+ .++|++.||++|++.++ | ++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~ 542 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LR 542 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HH
Confidence 999999999999999888999999999999999999999999999999999999875 58999999999999877 8 99
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHH
Q 004691 532 CLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDA 611 (736)
Q Consensus 532 ~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~ 611 (736)
++|+++|+++|++||++|++++|.. +++++++++++++++++++|++|+|.++++|||+||+|+|.++++++++++++
T Consensus 543 sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~ 620 (756)
T PLN02190 543 SIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDI 620 (756)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHH
Confidence 9999999999999999999999964 67888888889999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceeeccCCcc-------------hhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHhhhhc--
Q 004691 612 IMKLLGLRKASFLPTNKVLD-------------NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV-- 676 (736)
Q Consensus 612 l~~~lg~~~~~F~VT~K~~~-------------~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r~~~~-- 676 (736)
++|++|++++.|+||+|..+ .+++++|++|+|+|+ +|++++|.++++++|++|+++|++++...
T Consensus 621 ~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~ 699 (756)
T PLN02190 621 ILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSY 699 (756)
T ss_pred HHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999754 344678899999999 99999999999999999999999987642
Q ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHHHHhh
Q 004691 677 ---GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFG 731 (736)
Q Consensus 677 ---~~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
+.++.+ ++++.|+|+|++++||++||+ |||||+||+|++++|++|+++|++|+
T Consensus 700 s~~~~~~~l-~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 700 SHGGGGSGL-AEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred ccCcccccH-HHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 345554 999999999999999999998 99999999999999999999999986
No 7
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.2e-169 Score=1441.32 Aligned_cols=702 Identities=39% Similarity=0.764 Sum_probs=646.8
Q ss_pred CCCCCceEEeecCchhhHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004691 2 ESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
++.+||||+++.+++ .+||+++++++++++++++||+++.... ...|.|+++++||+||+|+|+++|+.||+|++|
T Consensus 9 ~~~~pL~~~~~~~~~-~~~R~~~~~~~~~i~~ll~~r~~~~~~~---~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHS---TTTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeecCCc-hHHHHHHHHHHHHHHHHHHHHhcccccc---cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 457899999998886 4699999999999999999999987643 236899999999999999999999999999999
Q ss_pred cCCCCCCCC---CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhh
Q 004691 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWW 158 (736)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w 158 (736)
.+++++|.+ ++++|.|||||||+||++|||.+++|||+|+|+.|||.||+.|||+|||++++|+++|.||++|||+|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999874 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCC--------------------CC
Q 004691 159 IPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGE--------------------YG 218 (736)
Q Consensus 159 ~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~--------------------~~ 218 (736)
|||||||+|||||||+||+.+ .+++.+||++||++|||||+|||.+.+.|. ++
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~-------~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSN-------SHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccC-------CCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 999999999999999999975 245678999999999999999999854333 46
Q ss_pred CCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004691 219 NSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (736)
Q Consensus 219 ~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~ 298 (736)
+++|||+||||+++++++. |.++.++|+++|++|||||+++||+||||||+++++|+.+||||||+++||||++||
T Consensus 238 ~~~dH~~ivqV~l~~~~~~----d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKDK----DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred CCCCCCceeeeeccCCCcc----chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 7999999999999987643 556678999999999999999999999999999999999999999999999999989
Q ss_pred hHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCcccc
Q 004691 299 PTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHK 378 (736)
Q Consensus 299 p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~ 378 (736)
|++++++||||+||+.++++|+||+||+|+|.+++|+|+|++++||+++++|+||+||++||||||+|||+||+|.+...
T Consensus 314 p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~ 393 (734)
T PLN02893 314 PQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSL 393 (734)
T ss_pred hhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccc
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999854311
Q ss_pred ccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHH
Q 004691 379 GIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC 458 (736)
Q Consensus 379 ~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~ 458 (736)
..+ ....++++. .......+++++++|++|++|.||++|+||+++||.|+|+|||++||++||+
T Consensus 394 ~~~---~~~~~~~~~-------------~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~ 457 (734)
T PLN02893 394 ILP---EIPELNPDH-------------LVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQC 457 (734)
T ss_pred cch---hhhhccccc-------------ccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHh
Confidence 000 000111110 0111223578999999999999999999999999999999999999999999
Q ss_pred cCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhccchhhhhhhcCccccCCCCCChhHHHHHHhhhHhhHHhHHHHHHH
Q 004691 459 KGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCF 538 (736)
Q Consensus 459 ~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~ 538 (736)
+||||+||+++++++.|++|+|+.++++||+||++|++|++++|+||+++|.++|++.||++|++.++|+ ++++|+++|
T Consensus 458 ~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY 536 (734)
T PLN02893 458 EGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIY 536 (734)
T ss_pred cCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHH
Confidence 9999999998778899999999999999999999999999999999999877899999999999999999 999999999
Q ss_pred HHHHHHHHHcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 004691 539 ATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGL 618 (736)
Q Consensus 539 ~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~ 618 (736)
+++|++||++|++++|+.+.+|+++++++++++++++++|++|+|.++++|||+||+|++.+++++++++++++++++|+
T Consensus 537 ~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~ 616 (734)
T PLN02893 537 AFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGI 616 (734)
T ss_pred HHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeccCCcchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHHH
Q 004691 619 RKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFA 698 (736)
Q Consensus 619 ~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r~~~~~~~~~~~~~~~~~~~~l~~l~p 698 (736)
++.+|+||+|+.+.++.++|++|.|+|+.++++++|+++++++|++|+++|+++++.++.+++++++++||+|++++++|
T Consensus 617 s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P 696 (734)
T PLN02893 617 STFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWP 696 (734)
T ss_pred cCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999887778899999999997799999999999999999999999998777788899999999999999999
Q ss_pred HHHHHhcccCCCCCChhHHHHHHHHHHHHHHhhhhcc
Q 004691 699 IVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL 735 (736)
Q Consensus 699 ~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
|++|+++||||||||+++++||++|+++++.+.++++
T Consensus 697 ~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~ 733 (734)
T PLN02893 697 IYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAF 733 (734)
T ss_pred HHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999875
No 8
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=2.3e-169 Score=1464.81 Aligned_cols=712 Identities=33% Similarity=0.632 Sum_probs=654.2
Q ss_pred CCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004691 3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
..+|||++++.++.. .+||+++++++++++++++||+++ ++.++.|+|+++++||+||+|+|+|.|+.||+|++|
T Consensus 191 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 266 (1044)
T PLN02915 191 ARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPINR 266 (1044)
T ss_pred cCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 368899999988874 469999999999999999999998 334678999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004691 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF 154 (736)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~ 154 (736)
.+++++|.+ +++||.|||||+|+||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.||++|
T Consensus 267 ~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 346 (1044)
T PLN02915 267 ETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEF 346 (1044)
T ss_pred ccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHH
Confidence 999998863 2359999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------C
Q 004691 155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-GE---------------Y 217 (736)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-g~---------------~ 217 (736)
||+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.++ ++ +
T Consensus 347 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g 426 (1044)
T PLN02915 347 ARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPG 426 (1044)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCC
Confidence 9999999999999999999999988 55667878999999999999999999999998644 11 3
Q ss_pred CCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004691 218 GNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (736)
Q Consensus 218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~ 297 (736)
...+|||+||||+++++++ .|.++.++|+||||+|||||+++||+||||||+.+|+|++|||+|||+++||||++|
T Consensus 427 ~~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~N 502 (1044)
T PLN02915 427 NNTRDHPGMIQVYLGSEGA----LDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYIN 502 (1044)
T ss_pred CCCCCCccceEEeecCCCC----cccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccC
Confidence 4568999999999998664 255677899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Ccc
Q 004691 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 376 (736)
Q Consensus 298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~ 376 (736)
||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|.||+|||+|+||||+|||+|||| .|+
T Consensus 503 ns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp 582 (1044)
T PLN02915 503 NSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPP 582 (1044)
T ss_pred cchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 443
Q ss_pred ccc--------------------------------c--------------------------------------------
Q 004691 377 HKG--------------------------------I-------------------------------------------- 380 (736)
Q Consensus 377 ~~~--------------------------------~-------------------------------------------- 380 (736)
..+ .
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1044)
T PLN02915 583 VSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEE 662 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 100 0
Q ss_pred --------------chHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCc
Q 004691 381 --------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV 446 (736)
Q Consensus 381 --------------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sv 446 (736)
..+.++++||+|.+|++|+..+.++ .+....+++++++|++|++|.||++|+||+++||.|+|+
T Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSv 740 (1044)
T PLN02915 663 GLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGG--LPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSV 740 (1044)
T ss_pred ccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcC--CCCCCCcHHHHHHHHhccccCCCccCchhHhhCcccccc
Confidence 0123456899999999999886543 333446789999999999999999999999999999999
Q ss_pred cchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhccchhhhhhhcCccccC-CCCCChhHHHHHHhhh
Q 004691 447 SEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMS 525 (736)
Q Consensus 447 tED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~ 525 (736)
|||+.||++||++||||+||+|+++++.|++|+|+.++++||+|||+|++||+++++||++++ .++|+++||++|++++
T Consensus 741 TEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~ 820 (1044)
T PLN02915 741 TEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTI 820 (1044)
T ss_pred ccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999998878899999999999999999999999999999999999975 3799999999999999
Q ss_pred HhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHH
Q 004691 526 LFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHF 605 (736)
Q Consensus 526 ~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~ 605 (736)
+|+ +.++|.++|+++|++||++|++++|.++..+..+|++++++++++.++|++|+|.+.++||++||+|+|.++++++
T Consensus 821 ~yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~L 899 (1044)
T PLN02915 821 VYP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHL 899 (1044)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHH
Confidence 999 9999999999999999999999999887777777788889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHhhhhc--CCchHHH
Q 004691 606 YGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV--GNWDKLF 683 (736)
Q Consensus 606 ~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r~~~~--~~~~~~~ 683 (736)
++++++++++||+++++|+||+|..+.+.++. ++.|+|+ ++++++|+++++++|++|+++|+++.+.. +.|+.++
T Consensus 900 favl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~ 976 (1044)
T PLN02915 900 FAVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLF 976 (1044)
T ss_pred HHHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 99999999999999999999999876543322 4889999 99999999999999999999999998764 4688899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHHHHh
Q 004691 684 AQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 730 (736)
Q Consensus 684 ~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~ 730 (736)
++++.++|++++++||++||++|+ +|+|+++++||++|+++|+++
T Consensus 977 ~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll 1021 (1044)
T PLN02915 977 GKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLV 1021 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHH
Confidence 999999999999999999999997 788999999999999999985
No 9
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=2.2e-169 Score=1466.21 Aligned_cols=716 Identities=31% Similarity=0.578 Sum_probs=646.8
Q ss_pred CCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheecccc
Q 004691 4 PLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (736)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (736)
.+|||+|++.++.. .+||+++++++++++++|+||+++ ++.++.|+|+++++||+||+|+|+|.|+.||+|++|.
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 57899999988874 469999999999999999999988 3345689999999999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHH
Q 004691 83 VFPERLPE------------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMRE 150 (736)
Q Consensus 83 ~~~~~l~~------------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~E 150 (736)
+++++|.+ +++||.|||||+|+||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99887643 136999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc---------------
Q 004691 151 AFRFAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED--------------- 214 (736)
Q Consensus 151 a~~~a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~--------------- 214 (736)
|++|||+||||||||+|||||||+||+.+ ++.+++..++|++||++||++|||||+|||.+.+.
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 99999999999999999999999999988 55667778999999999999999999999987420
Q ss_pred ----------C-----------------C-----------CCCCCCCcccEEEeecCCCCch----------hhhhcccc
Q 004691 215 ----------G-----------------E-----------YGNSRNHSTIIEIIQDTSGENE----------TIRQADLV 246 (736)
Q Consensus 215 ----------g-----------------~-----------~~~~~~h~~i~~v~~~~~~~~~----------~~~~~~~~ 246 (736)
+ . +++++|||+||||++++++..+ .+++..+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 0 0 4688999999999998766221 12223445
Q ss_pred CcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCce
Q 004691 247 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQK 326 (736)
Q Consensus 247 ~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~ 326 (736)
++|+||||+|||||+++||+||||||+.+|+|++|||||||+++||||++|||++++++||||+||+ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999997 889999999999
Q ss_pred eccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cccccc--------------------------
Q 004691 327 FHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG-------------------------- 379 (736)
Q Consensus 327 f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~~~-------------------------- 379 (736)
|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|....
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999 453320
Q ss_pred ---------cchHhhHhhhcCchhHHHhhhhhcc-cccc-----------------CCccchhhHHHhhhhhccceeecc
Q 004691 380 ---------IDLAELKDTFGESNLFIKSLHQSYE-HKNV-----------------NGENLSNVLQQETEVLASCSYEHQ 432 (736)
Q Consensus 380 ---------~d~~~~~~~~~~~~~~~~s~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~v~~c~ye~~ 432 (736)
.+...+.++||+|.+|++|+..+.. +... +....+++++++|+.|++|.||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 0112345699999999999966552 1111 123346789999999999999999
Q ss_pred ccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhccchhhhhhhcCccccCCCC
Q 004691 433 TKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSR 512 (736)
Q Consensus 433 t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~ 512 (736)
|+||+++||.|+|+|||+.||++||++||||+||+++++++.|++|+|+.++++||+|||+|++||+++|++|++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998778899999999999999999999999999999999998875 79
Q ss_pred CChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Q 004691 513 MSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNE 592 (736)
Q Consensus 513 l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~ 592 (736)
|++.||++|+++++|| +.+++.++|+++|++||++|++++|+.+..++.+++.++++++.+.++|++|+|.+.++|||+
T Consensus 901 Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrn 979 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRN 979 (1135)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhh
Confidence 9999999999999999 999999999999999999999999987544444444666888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHh
Q 004691 593 QRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIR 672 (736)
Q Consensus 593 ~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r 672 (736)
||+|+|.+++++++++++++++++|+++.+|+||+|..+.+.+++| ++.|+|+ ++++++|+++++++|++|+++|++|
T Consensus 980 Qq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R 1057 (1135)
T PLN02248 980 EQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSR 1057 (1135)
T ss_pred hheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999877666677 5899999 8999999999999999999999999
Q ss_pred hhhc--CCchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHHHHh
Q 004691 673 MIAV--GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 730 (736)
Q Consensus 673 ~~~~--~~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~ 730 (736)
++.+ +.|+.+++++++++|++++++||++||++| ++|+|+++++||++++++++++
T Consensus 1058 ~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll 1115 (1135)
T PLN02248 1058 TIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLL 1115 (1135)
T ss_pred HHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHH
Confidence 9864 357888999999999999999999999998 8888999999999999999886
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=8.6e-157 Score=1327.35 Aligned_cols=622 Identities=43% Similarity=0.808 Sum_probs=580.9
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004691 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (736)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf 176 (736)
|||||||+||++|||.++.|||+|+|++|||.|||+|||+|||++++|+++|.||++|||+||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------CCCCCCCcccEEEeecCCCCchh
Q 004691 177 SEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE---------YGNSRNHSTIIEIIQDTSGENET 239 (736)
Q Consensus 177 ~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------g~---------~~~~~~h~~i~~v~~~~~~~~~~ 239 (736)
+.+ +..+++.+++|++||++||++|||||+|||.+.++ ++ +++++|||+||||+++++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~-- 158 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK-- 158 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc--
Confidence 988 66778889999999999999999999999987432 22 467999999999999987653
Q ss_pred hhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceE
Q 004691 240 IRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLA 319 (736)
Q Consensus 240 ~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg 319 (736)
|.++.++|+|+||+|||||+++||+||||||+++|+|++|||+|||+++||||++|||++++++||||+||+.++++|
T Consensus 159 --~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~ 236 (720)
T PF03552_consen 159 --DVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIA 236 (720)
T ss_pred --ccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeE
Confidence 667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cccccc-------------------
Q 004691 320 FVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG------------------- 379 (736)
Q Consensus 320 ~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~~~------------------- 379 (736)
|||+||+|+|.+++|+|+|++.+||++++.|+||+|||+|+||||+|||+|||| .|+...
T Consensus 237 ~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~ 316 (720)
T PF03552_consen 237 FVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKK 316 (720)
T ss_pred EEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccc
Confidence 999999999999999999999999999999999999999999999999999999 555310
Q ss_pred ------c-----------------------------------chHhhHhhhcCchhHHHhhhhhccccccCCccchhhHH
Q 004691 380 ------I-----------------------------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (736)
Q Consensus 380 ------~-----------------------------------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
. +.++++++||+|++||+|+..+.. ..++...+++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~L 394 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASLL 394 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHHH
Confidence 0 014666899999999999986543 233445578999
Q ss_pred HhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhccchhh
Q 004691 419 QETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDV 498 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi 498 (736)
+||.+|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++|.|.||+|+.+.+.|++|||.|++||
T Consensus 395 ~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI 474 (720)
T PF03552_consen 395 EEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEI 474 (720)
T ss_pred HHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCccccC-CCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHHHHHHHHHH
Q 004691 499 SISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQ 577 (736)
Q Consensus 499 ~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll 577 (736)
+++|+||++++ .++|+++||++|++.++|+ ++++|.++|+++|++||++|.+++|+++.+++++|+++|+++++++++
T Consensus 475 ~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~ll 553 (720)
T PF03552_consen 475 FFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLL 553 (720)
T ss_pred ehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHH
Confidence 99999999987 5899999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccchhHHHHHH
Q 004691 578 EVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVS 657 (736)
Q Consensus 578 ~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~~~P~~~ 657 (736)
|++|+|.++++|||+||+|+|.++++++++++++++|++|+++.+|.||+|..++++.+.+ +.|+|+ ++++++|.++
T Consensus 554 E~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~tT 630 (720)
T PF03552_consen 554 EFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPTT 630 (720)
T ss_pred HHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHHH
Confidence 9999999999999999999999999999999999999999999999999999874443333 578887 7899999999
Q ss_pred HHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHHHHh
Q 004691 658 LMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 730 (736)
Q Consensus 658 l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~ 730 (736)
++++|++|+++|+++.+..+ +|+++++++|+++|++++++||++||++||+ |+|+++++||++||++|+++
T Consensus 631 llilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~ll 703 (720)
T PF03552_consen 631 LLILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLL 703 (720)
T ss_pred HHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHH
Confidence 99999999999999988754 6889999999999999999999999999976 59999999999999999986
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-73 Score=672.62 Aligned_cols=487 Identities=25% Similarity=0.339 Sum_probs=395.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCC-CCCCCceEEE
Q 004691 22 LHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPAIDVF 100 (736)
Q Consensus 22 ~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~VdV~ 100 (736)
+++++.+++.+.|++||++.|+|..+..+..++++++++|+++.+..+++.+..++|..|++ .+++. .+.+|+|||+
T Consensus 188 ~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~--~~~~~~~~~~P~VsVi 265 (852)
T PRK11498 188 MLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQP--VPLPKDMSLWPTVDIF 265 (852)
T ss_pred HHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC--CCCCcccCCCCcEEEE
Confidence 34455566678999999999999866677888899999999999888888888888887763 23333 4578999999
Q ss_pred EecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccccc
Q 004691 101 ICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAE 180 (736)
Q Consensus 101 Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~~~ 180 (736)
||| |||+.+++++|+.+++++|||++|++|||+|||++|.|.+ +|+++
T Consensus 266 IPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~--------------la~~~--------------- 313 (852)
T PRK11498 266 VPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ--------------FAQEV--------------- 313 (852)
T ss_pred Eec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH--------------HHHHC---------------
Confidence 999 9999889999999999999999999999999999984421 11111
Q ss_pred cccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCC
Q 004691 181 SDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSP 260 (736)
Q Consensus 181 ~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p 260 (736)
++.|+.|+++
T Consensus 314 ---------------------------------------------------------------------~v~yI~R~~n- 323 (852)
T PRK11498 314 ---------------------------------------------------------------------GVKYIARPTH- 323 (852)
T ss_pred ---------------------------------------------------------------------CcEEEEeCCC-
Confidence 2688888764
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCC-----
Q 004691 261 EHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHD----- 334 (736)
Q Consensus 261 ~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d----- 334 (736)
.|+||||+|+|+++ ++||||+++|||+++ +||+|++++++| .||+ +|+||+||.|+|.+.-.
T Consensus 324 ---~~gKAGnLN~aL~~----a~GEyIavlDAD~ip-~pdfL~~~V~~f~~dP~----VglVQtp~~f~n~dp~~rnl~~ 391 (852)
T PRK11498 324 ---EHAKAGNINNALKY----AKGEFVAIFDCDHVP-TRSFLQMTMGWFLKDKK----LAMMQTPHHFFSPDPFERNLGR 391 (852)
T ss_pred ---CcchHHHHHHHHHh----CCCCEEEEECCCCCC-ChHHHHHHHHHHHhCCC----eEEEEcceeccCCchHHHhhHH
Confidence 68999999999999 899999999999985 699999999876 5776 99999999999853210
Q ss_pred --hHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCcc
Q 004691 335 --IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 412 (736)
Q Consensus 335 --~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 412 (736)
.+.++.+.||+.++.|++.++++++||+++++||+++.
T Consensus 392 ~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe---------------------------------------- 431 (852)
T PRK11498 392 FRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD---------------------------------------- 431 (852)
T ss_pred HhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH----------------------------------------
Confidence 12345668899999999999999999999999999992
Q ss_pred chhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHh
Q 004691 413 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (736)
Q Consensus 413 ~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa 492 (736)
+.|||+++++|||+++++++|++||+++|+++ +.+.|++|+|++++++||.||+
T Consensus 432 ------------------------eVGGfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWa 485 (852)
T PRK11498 432 ------------------------EIGGIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWA 485 (852)
T ss_pred ------------------------HhcCCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHH
Confidence 24789999999999999999999999999986 6889999999999999999999
Q ss_pred ccchhhhhhhcCccccCCCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHHHHH
Q 004691 493 SGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAI 572 (736)
Q Consensus 493 ~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~ 572 (736)
+|++|+++ ++||++. +++++.||++|+++++++ +.+++.++|+++|++|+++|+.++.+. ...++.+ +++++
T Consensus 486 rG~lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a~---~~~i~~y-~lP~~ 557 (852)
T PRK11498 486 RGMVQIFR-LDNPLTG--KGLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYAP---ALMIALF-VLPHM 557 (852)
T ss_pred HHHHHHHH-HhChhcc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeCC---hHHHHHH-HHHHH
Confidence 99999998 5799873 799999999999999999 999999999999999999999887532 2222222 23333
Q ss_pred HHHHHHH-HHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccchh
Q 004691 573 CKHLQEV-ISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVF 651 (736)
Q Consensus 573 ~~~ll~~-~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~~ 651 (736)
+...+.. ..+|..+..||+| ++.++ .+++....++..++++++.+|+|||||++.++ +.|+|+ +
T Consensus 558 ~~~~l~~~~~~g~~r~~~wse----iye~v-~a~~l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~~~~~----~ 622 (852)
T PRK11498 558 IHASLTNSRIQGKYRHSFWSE----IYETV-LAWYIAPPTTVALFNPHKGKFNVTAKGGLVEE------EYVDWV----I 622 (852)
T ss_pred HHHHHHHHHhcCcchHhHHHH----HHHHH-HHHHHHHHHHHHHcCccCCCcccCCCCccccc------cceehH----H
Confidence 3322222 3356566678887 33334 55566667777799999999999999976554 567764 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 004691 652 LVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 713 (736)
Q Consensus 652 ~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p 713 (736)
..|+++++++|++|+++|++++..+. ....+.+|++|++|+++++...+.+..-++..++-|
T Consensus 623 ~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 623 SRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVRRSH 686 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 77999999999999999999987643 234677999999999999988888877665544433
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=4.4e-73 Score=671.02 Aligned_cols=508 Identities=26% Similarity=0.341 Sum_probs=408.3
Q ss_pred HHHHHHHHHHH-HHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCCCCCCCceE
Q 004691 20 NKLHAFLHCIA-IALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID 98 (736)
Q Consensus 20 ~r~~~~~~~~~-~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~Vd 98 (736)
-|++.++..++ .+.|++||++.|+|..+.....++++++++|++..+..+++.+..++|.+|+..+.+ .+++.+|+||
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~Vs 134 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTVD 134 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCeeE
Confidence 35555555444 579999999999997666667788899999999998888888888888877643322 1256789999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+++++++|+.+++++|||+|+++|+|+||||+|.|....-++++
T Consensus 135 ViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------- 186 (713)
T TIGR03030 135 VFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------- 186 (713)
T ss_pred EEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh-------------------------
Confidence 99999 99998899999999999999999999999999999987532211110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+..+.+.++++.+++ .++.|+.|++
T Consensus 187 ----------~~~~~~~~~~~l~~~---------------------------------------------~~v~yi~r~~ 211 (713)
T TIGR03030 187 ----------EAAQRREELKEFCRK---------------------------------------------LGVNYITRPR 211 (713)
T ss_pred ----------hhhhhHHHHHHHHHH---------------------------------------------cCcEEEECCC
Confidence 000011122222211 1378999887
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcC----
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEH---- 333 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~---- 333 (736)
+ +|+||||||+|+++ ++||+|+++|||+++ +||+|++++++|. ||+ +|+||+||.|+|.+.-
T Consensus 212 n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~-~pd~L~~~v~~f~~dp~----v~~Vqtp~~f~~p~~~~~nl 278 (713)
T TIGR03030 212 N----VHAKAGNINNALKH----TDGELILIFDADHVP-TRDFLQRTVGWFVEDPK----LFLVQTPHFFVSPDPIERNL 278 (713)
T ss_pred C----CCCChHHHHHHHHh----cCCCEEEEECCCCCc-ChhHHHHHHHHHHhCCC----EEEEeCCeeccCCCHHhhhh
Confidence 5 78999999999999 899999999999986 5999999999995 666 9999999999986421
Q ss_pred ---ChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCC
Q 004691 334 ---DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (736)
Q Consensus 334 ---d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 410 (736)
+.+.++.+.||..++.|.|.++++++||+|+++||+++.
T Consensus 279 ~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~-------------------------------------- 320 (713)
T TIGR03030 279 GTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALD-------------------------------------- 320 (713)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHH--------------------------------------
Confidence 233456778999999999999999999999999999992
Q ss_pred ccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHH
Q 004691 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
+.+||++++++||+++++++|++||+++|+++ +.+.|++|+|++++++||.|
T Consensus 321 --------------------------~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl~~~~~Qr~R 372 (713)
T TIGR03030 321 --------------------------EIGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETLSGHIGQRIR 372 (713)
T ss_pred --------------------------HcCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCHHHHHHHHHH
Confidence 24689999999999999999999999999986 67899999999999999999
Q ss_pred HhccchhhhhhhcCccccCCCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHHH
Q 004691 491 WASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLS 570 (736)
Q Consensus 491 Wa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~ 570 (736)
|++|++|+++. .||++. +++++.||++|+++++|+ +++++.++|+++|++++++|++++++....++ ++ +++
T Consensus 373 Wa~G~~qi~~~-~~pl~~--~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~~~---~~-~lp 444 (713)
T TIGR03030 373 WAQGMMQIFRL-DNPLLK--RGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVASALEIL---AY-ALP 444 (713)
T ss_pred HhcChHHHHhh-hCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCCHHHHH---HH-HHH
Confidence 99999999984 589884 799999999999999999 89999999999999999999999875322222 22 244
Q ss_pred HHHHHHHHHH-HhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccc
Q 004691 571 AICKHLQEVI-STGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSS 649 (736)
Q Consensus 571 ~~~~~ll~~~-~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~ 649 (736)
+++.+++.+. ..|..+..||++ ++. +...++.+.+++.+++++++.+|+|||||+..++ +. .+
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~------~~-----~~ 508 (713)
T TIGR03030 445 HMLHSLLTNSYLFGRVRWPFWSE----VYE-TVLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDE------DY-----FS 508 (713)
T ss_pred HHHHHHHHHHHHcCCeecchHHH----HHH-HHHHHHHHHHHHHHHhCcCCCCceecCCCccccc------cc-----cc
Confidence 4445554433 356667789988 333 3366688888899999999999999999986543 11 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCh
Q 004691 650 VFLVPMVSLMILNVAALVCGVIRMIAVG-NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISP 714 (736)
Q Consensus 650 ~~~~P~~~l~~l~l~al~~g~~r~~~~~-~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~ 714 (736)
+++.|++++++++++|+++|++|+...+ ..+.+++|++|++|+++.+...+.+...|+++++-|.
T Consensus 509 ~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~R 574 (713)
T TIGR03030 509 PLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPR 574 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCccc
Confidence 7899999999999999999999987533 2356789999999999999998888888877776553
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=1.1e-38 Score=372.64 Aligned_cols=360 Identities=16% Similarity=0.140 Sum_probs=248.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccch--hhH---HHHHHHHHHHHHHHHHHHHHHhhheeccccCCC---CC--C
Q 004691 19 LNKLHAFLHCIAIALLIYYRASYLLQETRAI--SII---PWLLVFASELLLSFIWLLGRAYLWRPVSRTVFP---ER--L 88 (736)
Q Consensus 19 ~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~--~~~---~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~---~~--l 88 (736)
+.|++.++..++.+.|..|+....++..+.+ ... +-.+++..+.+.....+++.+...+ .|+..+ +. -
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 5788888888888999999999988763321 111 1122334444444444444443322 111111 10 0
Q ss_pred CCCCCCCceEEEEecCCCCCCchHH----HHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhh
Q 004691 89 PEDDKLPAIDVFICTADPEKEPTFG----VMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRR 164 (736)
Q Consensus 89 ~~~~~~P~VdV~Vpt~~pynEp~~~----v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~ 164 (736)
+.....|+|+|+||+ |||+++. ++.|+.|+.+++||. +++++|+|||++|.+...
T Consensus 118 ~~~~~~~~VaVliP~---yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~----------------- 176 (691)
T PRK05454 118 PPPPPEARTAILMPI---YNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA----------------- 176 (691)
T ss_pred CCCCCCCceEEEEeC---CCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH-----------------
Confidence 113457999999999 8999864 566666777799985 799999999999854210
Q ss_pred cccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhcc
Q 004691 165 YRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQAD 244 (736)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~ 244 (736)
|. +.+++++.+.
T Consensus 177 ----------------------------e~----~~~~~L~~~~------------------------------------ 188 (691)
T PRK05454 177 ----------------------------EE----AAWLELRAEL------------------------------------ 188 (691)
T ss_pred ----------------------------HH----HHHHHHHHhc------------------------------------
Confidence 11 1122222111
Q ss_pred ccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEcc
Q 004691 245 LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 323 (736)
Q Consensus 245 ~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 323 (736)
..-+++.|.+|++| .++||||+|.+++.++ .++|||+++|||++++ ||+|++++++|. ||+ +|.||+
T Consensus 189 -~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP~----vGlVQt 256 (691)
T PRK05454 189 -GGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANPR----AGLIQT 256 (691)
T ss_pred -CCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCcC----EEEEeC
Confidence 00135889888765 6789999999999866 6789999999999975 999999999986 776 999999
Q ss_pred CceeccCCcCChHHHHHH----HhhhhHHhHhhhcC--CcccccccceeehhhccCCccccccchHhhHhhhcCchhHHH
Q 004691 324 PQKFHNFNEHDIYDGSLR----SGYRLQWPGMDGLK--GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIK 397 (736)
Q Consensus 324 Pq~f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~--~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~ 397 (736)
++.+.|.+ ..++.-+. ++......|.+.|+ ...|+|+|+++||+|+...
T Consensus 257 ~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~----------------------- 311 (691)
T PRK05454 257 LPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEH----------------------- 311 (691)
T ss_pred CccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHh-----------------------
Confidence 99998853 34544332 33345567777665 3568999999999999420
Q ss_pred hhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeecc
Q 004691 398 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTS 477 (736)
Q Consensus 398 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~a 477 (736)
|.. ......+||..++++||++++.+++++||+++|+++ .+.+++++
T Consensus 312 -----------------------------~gl---p~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~ 358 (691)
T PRK05454 312 -----------------------------CGL---PPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEEL 358 (691)
T ss_pred -----------------------------cCC---ccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccC
Confidence 000 000023678899999999999999999999999986 24689999
Q ss_pred CCCHHHHHHHHHHHhccchhhhhhhcCccccCCCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHH
Q 004691 478 TTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLC 545 (736)
Q Consensus 478 P~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ 545 (736)
|+|+.++++||.||++|++|.+.. ++ .+++++.+|++|++..+.++...++.+++++.|++.
T Consensus 359 P~tl~~~~~qr~RW~~G~lQ~l~~----l~--~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 359 PPNLLDELKRDRRWCQGNLQHLRL----LL--AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred CCCHHHHHHHHHHHHhchHHHHHH----HH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998752 22 378999999998876555523233334444444443
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.5e-35 Score=334.47 Aligned_cols=230 Identities=19% Similarity=0.201 Sum_probs=184.4
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
.+..|.|+|+||+ |||+ ..+.+|+.++++++||+ ++|+|+|||++|.|.+.+.|.++
T Consensus 71 ~~~~p~vsViIP~---yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~----------------- 127 (444)
T PRK14583 71 LKGHPLVSILVPC---FNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLA----------------- 127 (444)
T ss_pred cCCCCcEEEEEEe---CCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 3457999999999 9999 57899999999999994 89999999999977653332110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
..|+
T Consensus 128 ----------------------------------------------------------------------------~~~~ 131 (444)
T PRK14583 128 ----------------------------------------------------------------------------EDPR 131 (444)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0123
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceecc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (736)
+.++.+++ +++||+|+|.|++. +++|+++++|||+++ +||++++++..|. ||+ +|.||+.....|
T Consensus 132 v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~-~~d~L~~lv~~~~~~~~----~g~v~g~~~~~~ 197 (444)
T PRK14583 132 LRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALL-DKNAVPYLVAPLIANPR----TGAVTGNPRIRT 197 (444)
T ss_pred EEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCc-CHHHHHHHHHHHHhCCC----eEEEEccceecC
Confidence 55555443 46799999999998 899999999999986 6999999998775 554 999999877765
Q ss_pred CCcCChHHH----HHHHhhhhHHhHhhhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcc
Q 004691 330 FNEHDIYDG----SLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (736)
Q Consensus 330 ~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~ 404 (736)
. +..++. +...++..+.++.+..+..+ .+|+++.+||+++.
T Consensus 198 ~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~-------------------------------- 243 (444)
T PRK14583 198 R--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALA-------------------------------- 243 (444)
T ss_pred C--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHH--------------------------------
Confidence 3 222322 33344555666666666655 46889999999992
Q ss_pred ccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHH
Q 004691 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~ 484 (736)
+.+||+.++++||+++++|++.+||++.|+++ +.+++++|+|++++
T Consensus 244 --------------------------------~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~ 289 (444)
T PRK14583 244 --------------------------------DVGYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGL 289 (444)
T ss_pred --------------------------------HcCCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHH
Confidence 24679999999999999999999999999986 78999999999999
Q ss_pred HHHHHHHhccchhhhhh
Q 004691 485 LIQGTRWASGLIDVSIS 501 (736)
Q Consensus 485 ~~Qr~RWa~G~~qi~~~ 501 (736)
++||.||++|.+|+++.
T Consensus 290 ~~Qr~RW~~G~~~~~~~ 306 (444)
T PRK14583 290 WKQRLRWAQGGAEVFLK 306 (444)
T ss_pred HHHHHHHhCcHHHHHHH
Confidence 99999999999999974
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.4e-36 Score=318.33 Aligned_cols=242 Identities=16% Similarity=0.212 Sum_probs=183.9
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHc----CCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004691 97 IDVFICTADPEKEPTFGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (736)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~~~----~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p 172 (736)
|+|+||+ |||+++++.+|+.+... ++|+. +++|+|+|||+++...
T Consensus 1 ~SIliP~---~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--------------------------- 49 (254)
T cd04191 1 TAIVMPV---YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--------------------------- 49 (254)
T ss_pred CEEEEeC---CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH---------------------------
Confidence 6899999 99999989999999775 56633 4999999999987211
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEE
Q 004691 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
..|...+.+..+++ ...++++
T Consensus 50 ------------------~~~~~~~~~l~~~~-----------------------------------------~~~~~v~ 70 (254)
T cd04191 50 ------------------LAEEAAWLDLCEEL-----------------------------------------GAQGRIY 70 (254)
T ss_pred ------------------HHHHHHHHHHHHHh-----------------------------------------CCCCcEE
Confidence 01111111111111 0124689
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCC
Q 004691 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~ 331 (736)
|+.|+++ .|.||||||+++...+ +++|+|+++|||++++ ||+|.+++.+|. ||+ +|+||+|+.+.|.+
T Consensus 71 ~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~~----vg~vq~~~~~~n~~ 139 (254)
T cd04191 71 YRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANPR----AGIIQTAPKLIGAE 139 (254)
T ss_pred EEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCCC----EEEEeCCceeECCC
Confidence 9999886 6789999999998643 6789999999999864 999999999996 777 99999999999863
Q ss_pred cCChHHHH----HHHhhhhHHhHhhhcCC--cccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccc
Q 004691 332 EHDIYDGS----LRSGYRLQWPGMDGLKG--PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH 405 (736)
Q Consensus 332 ~~d~~~~~----~~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~ 405 (736)
..+.+- ...|...++.|++.|++ .+|+|+++++||+||...
T Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~------------------------------- 186 (254)
T cd04191 140 --TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEH------------------------------- 186 (254)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHh-------------------------------
Confidence 233332 23455567788877643 578999999999999320
Q ss_pred cccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHH
Q 004691 406 KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVL 485 (736)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~ 485 (736)
|.. ...|..+||.+++++||+++|++++++||+++|.++. ..+.+++|+|+++++
T Consensus 187 ---------------------~~~---~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~~~~~~~ 241 (254)
T cd04191 187 ---------------------CAL---PVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPPTLIDFL 241 (254)
T ss_pred ---------------------cCC---ccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCCCHHHHH
Confidence 000 0011235788899999999999999999999999862 346899999999999
Q ss_pred HHHHHHhccchh
Q 004691 486 IQGTRWASGLID 497 (736)
Q Consensus 486 ~Qr~RWa~G~~q 497 (736)
+||.||++|++|
T Consensus 242 ~qr~RW~~G~~q 253 (254)
T cd04191 242 KRDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHHhhcCc
Confidence 999999999998
No 16
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=5.1e-34 Score=321.59 Aligned_cols=282 Identities=17% Similarity=0.191 Sum_probs=202.0
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
++..|+|+|+||+ |||+ +.+.+|+.++.+++||.++++|+|+|||++|.|.+.+.|+++
T Consensus 45 ~~~~P~vsVIIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------------- 103 (439)
T TIGR03111 45 IGKLPDITIIIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------------- 103 (439)
T ss_pred cCCCCCEEEEEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 3568999999999 9999 799999999999999999999999999999987654333210
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
. .|+
T Consensus 104 -----------------------------~-----------------------------------------------~~~ 107 (439)
T TIGR03111 104 -----------------------------E-----------------------------------------------FPG 107 (439)
T ss_pred -----------------------------h-----------------------------------------------CCC
Confidence 0 011
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceecc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (736)
+..+..++ ++|||+|+|.|++. ++||+|+++|||+++ +||++++++..|. ||+ ++.|++.+.-..
T Consensus 108 v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~-~~d~L~~l~~~f~~~~~----v~~v~g~~~~~~ 173 (439)
T TIGR03111 108 LSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKL-HKDAIKNMVTRFENNPD----IHAMTGVILTDK 173 (439)
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCc-ChHHHHHHHHHHHhCCC----eEEEEeEEecCc
Confidence 22211122 47999999999999 899999999999986 6999999999996 565 777765442211
Q ss_pred C--Cc-CCh---HHHHHHHhhhhH---HhHh---hhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhHH
Q 004691 330 F--NE-HDI---YDGSLRSGYRLQ---WPGM---DGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFI 396 (736)
Q Consensus 330 ~--~~-~d~---~~~~~~~f~~~~---~~g~---d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~ 396 (736)
. +. ... +..+.+ +++.. ..|+ ...+..+ ..|+++++||+++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~------------------------ 228 (439)
T TIGR03111 174 ELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETIL------------------------ 228 (439)
T ss_pred hhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHH------------------------
Confidence 0 00 001 111111 12111 1111 1122332 45778889999992
Q ss_pred HhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHH-cCcEEEEeCCCCCeeee
Q 004691 397 KSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC-KGWTSTYLDPSRPQFLG 475 (736)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~-~Gwrs~y~~~~~~~~~g 475 (736)
+.+||+.++++||++++++++. .|+++.|+++ +.++.
T Consensus 229 ----------------------------------------~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~ 266 (439)
T TIGR03111 229 ----------------------------------------KTQLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYV 266 (439)
T ss_pred ----------------------------------------HhCCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEE
Confidence 2478999999999999999985 5999999986 78999
Q ss_pred ccCCCHHHHHHHHHHHhccchhhhhhhcCccccCCCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCcc
Q 004691 476 TSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLY 553 (736)
Q Consensus 476 ~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~ 553 (736)
++|+|++++++||.||++|.+|++....++... .+.++.++..+....... ...+|.+++.++++++.++|.++.
T Consensus 267 ~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 267 DPIDGLNKLYTQRQRWQRGELEVSHMFFESANK--SIKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred ECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh--chhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999999999999743333321 345566666554433444 557788888889999888887654
No 17
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=9.3e-35 Score=325.67 Aligned_cols=233 Identities=25% Similarity=0.315 Sum_probs=180.5
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004691 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~ 173 (736)
+|+|||+||+ |||+++++++|+.++.++|||. ++|+|+|||++|.|.+.+. +++.+
T Consensus 53 ~p~vsviiP~---ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~--------------~~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPA---YNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILE--------------ELGAE----- 108 (439)
T ss_pred CCceEEEEec---CCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHH--------------HHHhh-----
Confidence 5999999999 9999889999999999999998 8899999999997654322 22110
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEE
Q 004691 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
+ + |.+.-
T Consensus 109 ---------------------------~----------------------~------------------------~~~~~ 115 (439)
T COG1215 109 ---------------------------Y----------------------G------------------------PNFRV 115 (439)
T ss_pred ---------------------------c----------------------C------------------------cceEE
Confidence 0 0 11122
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcC
Q 004691 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEH 333 (736)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~ 333 (736)
+..++ ++++|++|+|.|+.. +++|+|+++|||+++ +||+|++++..|.|+.. ++.+|.|+.+.+.+..
T Consensus 116 ~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~-~~d~l~~~~~~f~~~~~---~~v~~~~~~~~~~~~~ 183 (439)
T COG1215 116 IYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVP-EPDALRELVSPFEDPPV---GAVVGTPRIRNRPDPS 183 (439)
T ss_pred Eeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCC-ChhHHHHHHhhhcCCCe---eEEeCCceeeecCChh
Confidence 21112 378999999999999 889999999999986 59999999999997752 4689999877764211
Q ss_pred ChHHHHHHHhhh-----hHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccccc
Q 004691 334 DIYDGSLRSGYR-----LQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 408 (736)
Q Consensus 334 d~~~~~~~~f~~-----~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~ 408 (736)
...+..+...|. ....+.+.....+++|++.++||++|.
T Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~------------------------------------ 227 (439)
T COG1215 184 NLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALE------------------------------------ 227 (439)
T ss_pred hhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHH------------------------------------
Confidence 122222222221 112222222456789999999999992
Q ss_pred CCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHH
Q 004691 409 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQG 488 (736)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr 488 (736)
+.+||..+++|||.++++++|.+|||+.|+++ +.+++++|+|+.++++||
T Consensus 228 ----------------------------~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr 277 (439)
T COG1215 228 ----------------------------EVGGWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQR 277 (439)
T ss_pred ----------------------------HhCCCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHH
Confidence 24579999999999999999999999999986 689999999999999999
Q ss_pred HHHhccchhhhhh
Q 004691 489 TRWASGLIDVSIS 501 (736)
Q Consensus 489 ~RWa~G~~qi~~~ 501 (736)
.||++|.+|++..
T Consensus 278 ~RW~~g~~~~~~~ 290 (439)
T COG1215 278 LRWARGGLQVLLL 290 (439)
T ss_pred HHHHcccceeeeh
Confidence 9999999999974
No 18
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=3e-33 Score=313.23 Aligned_cols=230 Identities=22% Similarity=0.261 Sum_probs=181.7
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
.+..|+|+|+||+ |||+ +.+++|+.|+++++||. ++|+|+|||++|.|.+.+.+.+
T Consensus 50 ~~~~p~vsViIp~---yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~------------------ 105 (420)
T PRK11204 50 LKEYPGVSILVPC---YNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLA------------------ 105 (420)
T ss_pred cCCCCCEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHH------------------
Confidence 3567999999999 9998 78999999999999994 8999999999997754322111
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
...|+
T Consensus 106 ---------------------------------------------------------------------------~~~~~ 110 (420)
T PRK11204 106 ---------------------------------------------------------------------------AQIPR 110 (420)
T ss_pred ---------------------------------------------------------------------------HhCCc
Confidence 01234
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceecc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (736)
+.++.+++ +.|||+|+|.|++. +++|+++++|||+++ +||+|.+++..|. ||+ ++.||+.....|
T Consensus 111 v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~-~~d~L~~l~~~~~~~~~----v~~v~g~~~~~~ 176 (420)
T PRK11204 111 LRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALL-DPDAAAYMVEHFLHNPR----VGAVTGNPRIRN 176 (420)
T ss_pred EEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCC-ChhHHHHHHHHHHhCCC----eEEEECCceecc
Confidence 67776554 46799999999999 899999999999986 5999999999994 665 999999887766
Q ss_pred CCcCChHHHHH----HHhhhhHHhHhhhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcc
Q 004691 330 FNEHDIYDGSL----RSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (736)
Q Consensus 330 ~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~ 404 (736)
. +...+..+ ...+.....+....+... .+|+++++||+++.
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~-------------------------------- 222 (420)
T PRK11204 177 R--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALH-------------------------------- 222 (420)
T ss_pred c--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHH--------------------------------
Confidence 3 22222222 222233333333344443 35888999999992
Q ss_pred ccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHH
Q 004691 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~ 484 (736)
+.+||++++++||++++++++++||++.|+++ +.++++.|+|++++
T Consensus 223 --------------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~ 268 (420)
T PRK11204 223 --------------------------------EVGYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGL 268 (420)
T ss_pred --------------------------------HhCCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHH
Confidence 24679999999999999999999999999986 68999999999999
Q ss_pred HHHHHHHhccchhhhhh
Q 004691 485 LIQGTRWASGLIDVSIS 501 (736)
Q Consensus 485 ~~Qr~RWa~G~~qi~~~ 501 (736)
++||.||++|++|.++.
T Consensus 269 ~~Qr~RW~~G~~~~l~~ 285 (420)
T PRK11204 269 WKQRLRWAQGGAEVLLK 285 (420)
T ss_pred HHHHHHHhcCHHHHHHH
Confidence 99999999999999984
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=1.5e-30 Score=294.87 Aligned_cols=264 Identities=18% Similarity=0.163 Sum_probs=184.0
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHH-HcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSA-MALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~-~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
...|+|+|+||+ |||+ +++.+||.++ .++||| +++|+|+||+++|.|.+.+.|.++
T Consensus 63 ~~~p~vaIlIPA---~NE~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~~----------------- 119 (504)
T PRK14716 63 VPEKRIAIFVPA---WREA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLAA----------------- 119 (504)
T ss_pred CCCCceEEEEec---cCch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 458999999999 9998 7999999986 578997 499999999999987654333210
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
.| |+
T Consensus 120 ---------------------------------------------------~~-------------------------p~ 123 (504)
T PRK14716 120 ---------------------------------------------------RY-------------------------PR 123 (504)
T ss_pred ---------------------------------------------------HC-------------------------CC
Confidence 11 22
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcC--CCCCC---CEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 325 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~--~~t~g---~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq 325 (736)
++.+. .+++| .++||+|||.+++... ...+| |+|+++|||+++ +|++|+.....+.| .++||.|.
T Consensus 124 v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v-~Pd~Lr~~~~~~~~------~~~VQ~pv 193 (504)
T PRK14716 124 VHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVI-HPLELRLYNYLLPR------HDFVQLPV 193 (504)
T ss_pred eEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCc-CccHHHHHHhhcCC------CCEEecce
Confidence 33222 12222 3689999999997621 01244 999999999986 69999876555443 56899998
Q ss_pred eeccCCcCCh----HHHHHHHhhhhHHhHhhhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhh
Q 004691 326 KFHNFNEHDI----YDGSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 400 (736)
Q Consensus 326 ~f~n~~~~d~----~~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~ 400 (736)
...+.+.+.. +..+....+...+..++.++++. ++|+|+++||++|. ++
T Consensus 194 ~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe-----------~l--------------- 247 (504)
T PRK14716 194 FSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALE-----------RL--------------- 247 (504)
T ss_pred eccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHH-----------HH---------------
Confidence 7665432222 22222222333456778888765 67999999999992 10
Q ss_pred hhccccccCCccchhhHHHhhhhhccceeeccccccccc-cccCCCccchHHHHHHHHHcCcEEEEeCCCC---------
Q 004691 401 QSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSR--------- 470 (736)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~-G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~--------- 470 (736)
.++ ..+ +|+++++|||+++|++++.+|||++|++...
T Consensus 248 -----------------~~~----------------~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~ 294 (504)
T PRK14716 248 -----------------AAE----------------RGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDR 294 (504)
T ss_pred -----------------Hhh----------------cCCCCCCCCCcchHHHHHHHHHHCCCEEEEeccccccccccccc
Confidence 000 012 3999999999999999999999999998631
Q ss_pred ----CeeeeccCCCHHHHHHHHHHHhccc-hhhhhhhc---CccccCCCCCChhHHHHHHhhhH
Q 004691 471 ----PQFLGTSTTNLNDVLIQGTRWASGL-IDVSISRF---CPLLYGPSRMSLLLSMCYGEMSL 526 (736)
Q Consensus 471 ----~~~~g~aP~tl~~~~~Qr~RWa~G~-~qi~~~~~---~pl~~~~~~l~~~qrl~y~~~~~ 526 (736)
.+.++++|+|++++++||.||+.|. +|... +. .++. .+.+.+++|..-+...+
T Consensus 295 ~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~-~~gw~~~~~--~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 295 RGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWE-RLGWKGPAA--TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred ccccccccccCccCHHHHHHHHHHHHhchHHhhHH-hcCCCCchh--hhhhHHHHHHHHHHHHH
Confidence 1355889999999999999999995 78764 21 1111 24466788877766433
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=3.5e-30 Score=264.64 Aligned_cols=227 Identities=25% Similarity=0.351 Sum_probs=175.0
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+ +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+..+
T Consensus 1 p~vSViIp~---yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPV---FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEec---CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 689999999 9998 799999999999999998999999998 88878764433210
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEE
Q 004691 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
.+.+ .-+++.++
T Consensus 55 -------------------------~~~~-------------------------------------------~~~~i~~~ 66 (232)
T cd06437 55 -------------------------EYAA-------------------------------------------QGVNIKHV 66 (232)
T ss_pred -------------------------HHhh-------------------------------------------cCCceEEE
Confidence 0000 01246677
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCC
Q 004691 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
.+.++ .++|++|+|.|++. ++||+|+++|||+++ +|++|+++..++.|++ +|+||+...+.|.+.+
T Consensus 67 ~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~-~~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~~~- 132 (232)
T cd06437 67 RRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVP-PPDFLQKTPPYFADPK----LGFVQTRWGHINANYS- 132 (232)
T ss_pred ECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCC-ChHHHHHhhhhhcCCC----eEEEecceeeEcCCCc-
Confidence 66553 56799999999999 899999999999997 5999999888887776 9999987766654221
Q ss_pred hHHHH----HHHhhhhHHhHhhhcCCc-ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccC
Q 004691 335 IYDGS----LRSGYRLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (736)
Q Consensus 335 ~~~~~----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 409 (736)
.+... ...++.....+....+.. .++|+++++||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------- 175 (232)
T cd06437 133 LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIE------------------------------------- 175 (232)
T ss_pred hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHH-------------------------------------
Confidence 22111 111233333444333333 357999999999982
Q ss_pred CccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHH
Q 004691 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 489 (736)
+.+||+..+..||+++++|++.+||++.|++. +.+++..|+|+.++++||.
T Consensus 176 ---------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~ 226 (232)
T cd06437 176 ---------------------------DAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQH 226 (232)
T ss_pred ---------------------------HhCCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHH
Confidence 23679988899999999999999999999986 6899999999999999999
Q ss_pred HHhccc
Q 004691 490 RWASGL 495 (736)
Q Consensus 490 RWa~G~ 495 (736)
||++|.
T Consensus 227 rW~~g~ 232 (232)
T cd06437 227 RWSKGP 232 (232)
T ss_pred HhccCC
Confidence 999984
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=6.8e-30 Score=260.95 Aligned_cols=229 Identities=37% Similarity=0.541 Sum_probs=184.6
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+
T Consensus 1 p~vsviip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------------ 53 (234)
T cd06421 1 PTVDVFIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAE------------------------ 53 (234)
T ss_pred CceEEEEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHH------------------------
Confidence 789999999 99987899999999999999998999999999999865432111
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEE
Q 004691 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
+.. .. ++.++
T Consensus 54 -----------------------------~~~----------------------------------------~~-~~~~~ 63 (234)
T cd06421 54 -----------------------------LGV----------------------------------------EY-GYRYL 63 (234)
T ss_pred -----------------------------hhc----------------------------------------cc-CceEE
Confidence 000 00 23555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC-CCCCCceEEEccCceeccCCcC
Q 004691 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-PKTSSSLAFVQFPQKFHNFNEH 333 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D-~~~~~~vg~VQ~Pq~f~n~~~~ 333 (736)
.++++ .++|+||+|.|++. +++|+|+++|+|.++ +|++|.+++..|.+ ++ ++.|++++.+.+.+..
T Consensus 64 ~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~~~----~~~v~~~~~~~~~~~~ 130 (234)
T cd06421 64 TRPDN----RHAKAGNLNNALAH----TTGDFVAILDADHVP-TPDFLRRTLGYFLDDPK----VALVQTPQFFYNPDPF 130 (234)
T ss_pred EeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccccCc-CccHHHHHHHHHhcCCC----eEEEecceEEecCCcc
Confidence 55543 67899999999998 899999999999997 59999999999975 55 9999999988765432
Q ss_pred C----hHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccC
Q 004691 334 D----IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (736)
Q Consensus 334 d----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 409 (736)
+ .+......++..+..+.+.++...++|++.++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~------------------------------------- 173 (234)
T cd06421 131 DWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALD------------------------------------- 173 (234)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHH-------------------------------------
Confidence 1 22233344555566666666677788999999999992
Q ss_pred CccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHH
Q 004691 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 489 (736)
+.+||+...+.||++++++++++||++.|.++ +.+.+..|++++++++||.
T Consensus 174 ---------------------------~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~ 224 (234)
T cd06421 174 ---------------------------EIGGFPTDSVTEDLATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRL 224 (234)
T ss_pred ---------------------------HhCCCCccceeccHHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHHH
Confidence 23568888889999999999999999999987 6789999999999999999
Q ss_pred HHhccchhhh
Q 004691 490 RWASGLIDVS 499 (736)
Q Consensus 490 RWa~G~~qi~ 499 (736)
||..|++|++
T Consensus 225 rw~~~~~~~~ 234 (234)
T cd06421 225 RWARGMLQIL 234 (234)
T ss_pred HHhcCCeeeC
Confidence 9999999864
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=4.1e-28 Score=285.25 Aligned_cols=240 Identities=18% Similarity=0.211 Sum_probs=173.1
Q ss_pred CCCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhc
Q 004691 87 RLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRY 165 (736)
Q Consensus 87 ~l~~~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~ 165 (736)
.++ +++.|+|+|+||+ |||+ .++.+|+.+++ ++|||+ ++|+++||++++.|.+++.+.+
T Consensus 56 ~l~-~~~~~~vsIlVPa---~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~------------- 115 (727)
T PRK11234 56 ELY-KPDEKPLAIMVPA---WNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC------------- 115 (727)
T ss_pred hcc-cCCCCCEEEEEec---Ccch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH-------------
Confidence 344 4566999999999 9999 79999999987 799997 9999999888876664332221
Q ss_pred ccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccc
Q 004691 166 RIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADL 245 (736)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~ 245 (736)
+.
T Consensus 116 ---------------------------------~~--------------------------------------------- 117 (727)
T PRK11234 116 ---------------------------------AR--------------------------------------------- 117 (727)
T ss_pred ---------------------------------HH---------------------------------------------
Confidence 11
Q ss_pred cCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCC-----CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEE
Q 004691 246 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAF 320 (736)
Q Consensus 246 ~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~-----t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~ 320 (736)
+|++..+.-+ ++| .++||+|||+++...-.. ...++++++|||.++ +|++|+ .+.++.++ .++
T Consensus 118 --~p~~~~v~~~-~~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v-~pd~L~-~~~~l~~~-----~~~ 185 (727)
T PRK11234 118 --FPNVHKVVCA-RPG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVI-SPMELR-LFNYLVER-----KDL 185 (727)
T ss_pred --CCCcEEEEeC-CCC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCC-ChhHHH-HHHhhcCC-----CCe
Confidence 1222222221 233 468999999999873110 234678889999986 699997 67778754 289
Q ss_pred EccCceeccCCcCChHH----HHHHHhhhhHHhHhhhcCCcc-cccccceeehh---hccCCccccccchHhhHhhhcCc
Q 004691 321 VQFPQKFHNFNEHDIYD----GSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRE---SLYGNFKHKGIDLAELKDTFGES 392 (736)
Q Consensus 321 VQ~Pq~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~---AL~~~~~~~~~d~~~~~~~~~~~ 392 (736)
||.|....+.+.+...+ .+....+...+++++.++++. +.|+|+.|+|+ +|.
T Consensus 186 VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~-------------------- 245 (727)
T PRK11234 186 IQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALL-------------------- 245 (727)
T ss_pred EeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHH--------------------
Confidence 99997644332222222 333334446678888887764 67999999444 441
Q ss_pred hhHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccc---cccCCCccchHHHHHHHHHcCcEEEEeCCC
Q 004691 393 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV---GFSYQSVSEDFFTGFILHCKGWTSTYLDPS 469 (736)
Q Consensus 393 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~---G~~~~svtED~~t~~rl~~~Gwrs~y~~~~ 469 (736)
+.+ ||+.+++|||+++|++|+.+||+++|++..
T Consensus 246 --------------------------------------------~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~ 281 (727)
T PRK11234 246 --------------------------------------------EDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFP 281 (727)
T ss_pred --------------------------------------------HhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccc
Confidence 122 599999999999999999999999999821
Q ss_pred ---------------------CCeeeeccCCCHHHHHHHHHHHhcc-chhhhh
Q 004691 470 ---------------------RPQFLGTSTTNLNDVLIQGTRWASG-LIDVSI 500 (736)
Q Consensus 470 ---------------------~~~~~g~aP~tl~~~~~Qr~RWa~G-~~qi~~ 500 (736)
..++++..|+|+++.++||.||..| .+|.+.
T Consensus 282 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 282 VVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 1348889999999999999999999 588764
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.97 E-value=5.1e-29 Score=258.09 Aligned_cols=231 Identities=24% Similarity=0.293 Sum_probs=178.0
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (736)
|.|+|+||+ |||+ +.+.+|+.|+++++||.++++|+|+|||++|.|.+.+.+...
T Consensus 1 p~vsIiIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~--------------------- 55 (241)
T cd06427 1 PVYTILVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRL--------------------- 55 (241)
T ss_pred CeEEEEEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhcc---------------------
Confidence 789999999 9998 799999999999999988899999999999977543221100
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEE
Q 004691 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
+...+++++
T Consensus 56 -----------------------------------------------------------------------~~~~~i~~~ 64 (241)
T cd06427 56 -----------------------------------------------------------------------PSIFRVVVV 64 (241)
T ss_pred -----------------------------------------------------------------------CCCeeEEEe
Confidence 000124444
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCC
Q 004691 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
...+ ..||++|+|.|++. ++||+|+++|+|++++ |+++.+++.+|.+. ++++++||++..+.|...+
T Consensus 65 ~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~- 131 (241)
T cd06427 65 PPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPLNYYNAREN- 131 (241)
T ss_pred cCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCcc-
Confidence 3222 46899999999999 8999999999999975 99999999998631 2359999998877764321
Q ss_pred hHH----HHHHHhhhhHHhHhhhcCCcc-cccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccC
Q 004691 335 IYD----GSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (736)
Q Consensus 335 ~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 409 (736)
... .+....++...++....+... ++|++.++||+++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------- 174 (241)
T cd06427 132 WLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLR------------------------------------- 174 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHH-------------------------------------
Confidence 111 122233444556665555554 46888899999982
Q ss_pred CccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHH
Q 004691 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 489 (736)
+.+||+....+||++.++|++.+||++.+++. ...+..|+|++++++||.
T Consensus 175 ---------------------------~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~ 224 (241)
T cd06427 175 ---------------------------ELGGWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRS 224 (241)
T ss_pred ---------------------------HcCCCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHH
Confidence 23678887889999999999999999999974 457899999999999999
Q ss_pred HHhccchhhhhh
Q 004691 490 RWASGLIDVSIS 501 (736)
Q Consensus 490 RWa~G~~qi~~~ 501 (736)
||+.|.+|++..
T Consensus 225 Rw~~g~~~~~~~ 236 (241)
T cd06427 225 RWIKGYMQTWLV 236 (241)
T ss_pred HHhccHHHHHHH
Confidence 999999999873
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=5.7e-28 Score=248.19 Aligned_cols=229 Identities=23% Similarity=0.316 Sum_probs=171.0
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004691 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||+ |||+++.+.+++.++++++||. .+|+|+|||++|.|.....+.. |++++
T Consensus 1 siiip~---~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~---------~~~~~----------- 55 (236)
T cd06435 1 SIHVPC---YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAH---------CAQLG----------- 55 (236)
T ss_pred CeeEee---CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHH---------HHHhC-----------
Confidence 589999 9998789999999999999996 7899999999997642111100 00000
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEecc
Q 004691 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
+++.++..+
T Consensus 56 -----------------------------------------------------------------------~~i~~i~~~ 64 (236)
T cd06435 56 -----------------------------------------------------------------------ERFRFFHVE 64 (236)
T ss_pred -----------------------------------------------------------------------CcEEEEEcC
Confidence 134566554
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHH
Q 004691 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (736)
++ .++|+||+|.|++.+. .++|+|+++|+|..++ |++|.+++..|.+++ ++.|+++..+.+.. ..++.
T Consensus 65 ~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~-~~~~~ 132 (236)
T cd06435 65 PL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDPR----VGFVQAPQDYRDGE-ESLFK 132 (236)
T ss_pred CC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCCC----eeEEecCccccCCC-ccHHH
Confidence 43 4679999999999842 3589999999999875 999999999987665 99999887655431 22332
Q ss_pred HHH----HHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccc
Q 004691 338 GSL----RSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 413 (736)
Q Consensus 338 ~~~----~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
... ..++......+...+...+.|+++++||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------------- 171 (236)
T cd06435 133 RMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALD----------------------------------------- 171 (236)
T ss_pred HHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHH-----------------------------------------
Confidence 111 11122222222333344567888999999982
Q ss_pred hhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhc
Q 004691 414 SNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWAS 493 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~ 493 (736)
+.+||+.....||+++++|++++||++.|+++ +..++..|+|+.++.+||.||++
T Consensus 172 -----------------------~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~ 226 (236)
T cd06435 172 -----------------------DVGGWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAY 226 (236)
T ss_pred -----------------------HhCCCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhc
Confidence 23679888889999999999999999999986 57789999999999999999999
Q ss_pred cchhhhh
Q 004691 494 GLIDVSI 500 (736)
Q Consensus 494 G~~qi~~ 500 (736)
|++|++.
T Consensus 227 g~~~~~~ 233 (236)
T cd06435 227 GAVQILK 233 (236)
T ss_pred chhhhhh
Confidence 9999987
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=1.7e-28 Score=250.58 Aligned_cols=224 Identities=28% Similarity=0.326 Sum_probs=143.8
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+ +.+.++|.|+++++||. ++|+|+||++++.|.+.+.+.+ .+++
T Consensus 1 P~v~Vvip~---~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~----------~~~~-------- 56 (228)
T PF13641_consen 1 PRVSVVIPA---YNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALA----------ARYP-------- 56 (228)
T ss_dssp --EEEE--B---SS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHH----------HTTG--------
T ss_pred CEEEEEEEe---cCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHH----------HHcC--------
Confidence 789999999 9998 59999999999999955 9999999999986654332211 0000
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEE
Q 004691 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
. -.+.++
T Consensus 57 --------------------------------------------------~-----------------------~~v~vi 63 (228)
T PF13641_consen 57 --------------------------------------------------R-----------------------VRVRVI 63 (228)
T ss_dssp --------------------------------------------------G------------------------GEEEE
T ss_pred --------------------------------------------------C-----------------------CceEEe
Confidence 0 025666
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCC
Q 004691 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
.+++++| .++|++|+|.+++. +++|+|+++|+|.++ +|++|.+++.+|.+|+ +++||++..+.+. . .
T Consensus 64 ~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~-~p~~l~~~~~~~~~~~----~~~v~~~~~~~~~-~-~ 130 (228)
T PF13641_consen 64 RRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVL-DPDWLERLLAAFADPG----VGAVGGPVFPDND-R-N 130 (228)
T ss_dssp E----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBSS------EEEEEEEETTC-C-C
T ss_pred ecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEE-CHHHHHHHHHHHHhCC----CCeEeeeEeecCC-C-C
Confidence 6654432 24799999999999 889999999999997 5999999999997776 9999988866642 2 1
Q ss_pred hHHHHHHHhh----hhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCC
Q 004691 335 IYDGSLRSGY----RLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (736)
Q Consensus 335 ~~~~~~~~f~----~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 410 (736)
.+......++ .....+....+...++|+++++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~-------------------------------------- 172 (228)
T PF13641_consen 131 WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE-------------------------------------- 172 (228)
T ss_dssp EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH--------------------------------------
T ss_pred HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH--------------------------------------
Confidence 2111111111 1122333444556678999999999992
Q ss_pred ccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHH
Q 004691 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
+.+||+.....||.++++++.++||++.|++. +.++...|.|++++++||.|
T Consensus 173 --------------------------~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~R 224 (228)
T PF13641_consen 173 --------------------------EVGGFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFR 224 (228)
T ss_dssp --------------------------HH-S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHH
T ss_pred --------------------------HhCCCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhc
Confidence 23578888889999999999999999999986 68999999999999999999
Q ss_pred Hhcc
Q 004691 491 WASG 494 (736)
Q Consensus 491 Wa~G 494 (736)
|+.|
T Consensus 225 W~~g 228 (228)
T PF13641_consen 225 WSRG 228 (228)
T ss_dssp HH--
T ss_pred cCcC
Confidence 9987
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=4.3e-26 Score=252.14 Aligned_cols=228 Identities=15% Similarity=0.155 Sum_probs=166.5
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~ 171 (736)
+..|+|+|+||+ |||+ +.+.+|+.|++++|||. ++|+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~---~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPL---HGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEEC---CCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 347999999999 9999 57899999999999997 8999999999997654322111
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeE
Q 004691 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
+. ||. .++
T Consensus 93 ---------------------------~~----------------------~p~-----------------------~~i 100 (373)
T TIGR03472 93 ---------------------------AD----------------------FPD-----------------------ADI 100 (373)
T ss_pred ---------------------------Hh----------------------CCC-----------------------Cce
Confidence 00 110 125
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCC
Q 004691 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 331 (736)
.++..++++| .++|++|+|++++. +++|+++++|||.+++ ||+|++++..|.||+ ++.|+++....+
T Consensus 101 ~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~~----v~~V~~~~~~~~-- 167 (373)
T TIGR03472 101 DLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADPD----VGLVTCLYRGRP-- 167 (373)
T ss_pred EEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCCC----cceEeccccCCC--
Confidence 5664444433 45799999999998 8999999999999875 999999999998877 999988643222
Q ss_pred cCChHHHHHHH-----hhhhHHhHhhhcCC-cccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccc
Q 004691 332 EHDIYDGSLRS-----GYRLQWPGMDGLKG-PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH 405 (736)
Q Consensus 332 ~~d~~~~~~~~-----f~~~~~~g~d~~~~-~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~ 405 (736)
.+......... ++...... +..+. .++.|++.++||+++.
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~--------------------------------- 213 (373)
T TIGR03472 168 VPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLE--------------------------------- 213 (373)
T ss_pred CCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHH---------------------------------
Confidence 22222211111 11111111 12232 3467888999999992
Q ss_pred cccCCccchhhHHHhhhhhccceeeccccccccccccC--CCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHH
Q 004691 406 KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLND 483 (736)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~ 483 (736)
+.+||+. ++++||++++.+++++||++.|++. +......|+|+++
T Consensus 214 -------------------------------~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~~ 260 (373)
T TIGR03472 214 -------------------------------AIGGLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFAT 260 (373)
T ss_pred -------------------------------HcCChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHHH
Confidence 2467874 6789999999999999999999875 5677788899999
Q ss_pred HHHHHHHHhccch
Q 004691 484 VLIQGTRWASGLI 496 (736)
Q Consensus 484 ~~~Qr~RWa~G~~ 496 (736)
+++||.||++...
T Consensus 261 ~~~q~~RW~r~~~ 273 (373)
T TIGR03472 261 LLAHELRWSRTIR 273 (373)
T ss_pred HHHHHHHHHhhhh
Confidence 9999999985544
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.94 E-value=1.1e-26 Score=241.92 Aligned_cols=171 Identities=19% Similarity=0.097 Sum_probs=115.4
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCChHHHHHHHhh---h
Q 004691 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGY---R 345 (736)
Q Consensus 270 aLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~---~ 345 (736)
++|.++.. +++|+|+++|||+++ +|++|++++.+| .||+ +|.|++.+...|.. ...+...+..-| .
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~-~~~~l~~l~~~~~~~p~----vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKF-DPDSIVQLYKAMDKDPE----IGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcC-CHhHHHHHHHHHHhCCC----EEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 46777766 899999999999997 599999999998 4776 99999988777642 123322222111 1
Q ss_pred h-HHhHhhhcCCc-ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhh
Q 004691 346 L-QWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEV 423 (736)
Q Consensus 346 ~-~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (736)
. .....+..+.. ...|++++||++++.+.+... ..
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~--------------~~----------------------------- 170 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGK--------------GP----------------------------- 170 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCcccc--------------cc-----------------------------
Confidence 1 11223334443 356889999999995311000 00
Q ss_pred hccceeecccccccc-ccccCCCccchHHHHHHHHHcCcEEEE--eCCCCCeeeeccCCCHHHHHHHHHHHhccchh
Q 004691 424 LASCSYEHQTKWGEE-VGFSYQSVSEDFFTGFILHCKGWTSTY--LDPSRPQFLGTSTTNLNDVLIQGTRWASGLID 497 (736)
Q Consensus 424 v~~c~ye~~t~~g~~-~G~~~~svtED~~t~~rl~~~Gwrs~y--~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q 497 (736)
+..+.|...+- ++ .+....+++||.+++++|..+||++.| +++ +.+++++|+|++++++||.||++|++.
T Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 171 LLDYAYLTNTV--DSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred chhhccccCcc--cchHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 00000000000 11 123446789999999999999999999 875 789999999999999999999999874
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=1.2e-23 Score=244.94 Aligned_cols=236 Identities=17% Similarity=0.178 Sum_probs=168.5
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEE---EcCCCCccchHhHHHHHHhhhhhhhhhhhcc
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAM-ALDYPVDKLHVYL---SDDGGSPITLRGMREAFRFAKWWIPFCRRYR 166 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~v~v---~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~ 166 (736)
..+.|.|+|+||+ |||+ +++.+||.+++ ++|||+ ++|+| .|||.+. +++.+.+
T Consensus 67 ~~~~~~vsIlVPa---~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~---~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPA---WKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAETI---TEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeC---CCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHH---HHHHHHh--------------
Confidence 3567999999999 9999 89999999986 899995 78999 4777443 2221110
Q ss_pred cccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhcccc
Q 004691 167 IKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLV 246 (736)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~ 246 (736)
.
T Consensus 124 -------------------------------------------------------------------------------~ 124 (703)
T PRK15489 124 -------------------------------------------------------------------------------R 124 (703)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CcCeEEEEeccCCCCCCCCChHHHHHHHHHhc---CCCCCCCE--EEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEE
Q 004691 247 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVS---GVISNSPY--ILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 321 (736)
Q Consensus 247 ~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~---~~~t~g~~--Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 321 (736)
.+|+++-|..+. + ...+||.|||.++... .....++| |+++|||.+ ++|++|+. +.++.+.. .+|
T Consensus 125 ~~p~~~~v~~~~-~--gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~-~~P~~L~~-~~~~~~~~-----~~i 194 (703)
T PRK15489 125 RYKRLVRVEVPH-D--GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDV-LHPLELKY-FNYLLPRK-----DLV 194 (703)
T ss_pred cCCcEEEEEcCC-C--CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCC-CChhHHHH-HHhhcCCc-----cee
Confidence 123344444322 2 2478999999999863 11123444 999999998 57999965 46665321 468
Q ss_pred ccCceeccCCcC----ChHHHHHHHhhhhHHhHhhhcCCccc-ccccceeehhhccCCccccccchHhhHhhhcCchhHH
Q 004691 322 QFPQKFHNFNEH----DIYDGSLRSGYRLQWPGMDGLKGPFL-TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFI 396 (736)
Q Consensus 322 Q~Pq~f~n~~~~----d~~~~~~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~ 396 (736)
|.|..-...+.+ ..|..|....++..++++..+++++. .|+|++|||++|. ++
T Consensus 195 Q~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~-----------~l----------- 252 (703)
T PRK15489 195 QLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALL-----------AL----------- 252 (703)
T ss_pred eeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHH-----------HH-----------
Confidence 987421211122 23455666777888999998988764 6899999999982 10
Q ss_pred HhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccc---cccCCCccchHHHHHHHHHcCcEEEEeCC-----
Q 004691 397 KSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV---GFSYQSVSEDFFTGFILHCKGWTSTYLDP----- 468 (736)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~---G~~~~svtED~~t~~rl~~~Gwrs~y~~~----- 468 (736)
+ +++ ||+.+|+|||+++|+||+++|||+.|+.-
T Consensus 253 ---------------------~------------------~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~ 293 (703)
T PRK15489 253 ---------------------M------------------KERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFR 293 (703)
T ss_pred ---------------------H------------------HhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEecccc
Confidence 0 123 58889999999999999999999999321
Q ss_pred ----------------CCCeeeeccCCCHHHHHHHHHHHhccch-hhh
Q 004691 469 ----------------SRPQFLGTSTTNLNDVLIQGTRWASGLI-DVS 499 (736)
Q Consensus 469 ----------------~~~~~~g~aP~tl~~~~~Qr~RWa~G~~-qi~ 499 (736)
...+.++..|.|+++.++||.||-.|-. |-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 294 VRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred ccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1257788999999999999999999987 654
No 29
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.93 E-value=3.1e-25 Score=222.68 Aligned_cols=193 Identities=16% Similarity=0.194 Sum_probs=153.1
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (736)
|.|+|+||+ |||+. .+.+++.|+++++||. ++|+|+|||++|.|.+.+.+..+ +
T Consensus 1 p~vsviip~---~n~~~-~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPL---CGVDP-NLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEec---CCCCc-cHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 789999999 89984 6899999999999997 89999999999977643322110 0
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEE
Q 004691 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
||.+ .+.++
T Consensus 55 ------------------------------------------------~~~~-----------------------~~~~~ 63 (196)
T cd02520 55 ------------------------------------------------YPNV-----------------------DARLL 63 (196)
T ss_pred ------------------------------------------------CCCC-----------------------cEEEE
Confidence 0000 13344
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCC
Q 004691 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
..+++.| ..+|++|+|.|++. ++||+++++|+|+.++ |++|.+++..+.+++ ++.|++.
T Consensus 64 ~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~---------- 122 (196)
T cd02520 64 IGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL---------- 122 (196)
T ss_pred ecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee----------
Confidence 4433322 34799999999998 8999999999999875 999999999987766 7888743
Q ss_pred hHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccch
Q 004691 335 IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLS 414 (736)
Q Consensus 335 ~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 414 (736)
...|+++++||+++.
T Consensus 123 -----------------------~~~g~~~~~r~~~~~------------------------------------------ 137 (196)
T cd02520 123 -----------------------CAFGKSMALRREVLD------------------------------------------ 137 (196)
T ss_pred -----------------------cccCceeeeEHHHHH------------------------------------------
Confidence 356889999999982
Q ss_pred hhHHHhhhhhccceeeccccccccccccC--CCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHh
Q 004691 415 NVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (736)
Q Consensus 415 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa 492 (736)
+.+||+. ..+.||++.++++..+||++.|+++ +.++...|.+++++++||.||+
T Consensus 138 ----------------------~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~ 193 (196)
T cd02520 138 ----------------------AIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWS 193 (196)
T ss_pred ----------------------hccChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHh
Confidence 2356764 3568999999999999999999986 6788999999999999999998
Q ss_pred cc
Q 004691 493 SG 494 (736)
Q Consensus 493 ~G 494 (736)
+.
T Consensus 194 ~~ 195 (196)
T cd02520 194 RT 195 (196)
T ss_pred cc
Confidence 64
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.92 E-value=3.3e-24 Score=217.63 Aligned_cols=222 Identities=22% Similarity=0.228 Sum_probs=163.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||| |||+ +.+.+||.|+++++||.++++|+|+|||++|.|.+.+.+...
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~------------------------- 51 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAA------------------------- 51 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHh-------------------------
Confidence 68999 9998 789999999999999998999999999999977542220000
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
...+++.++.++.
T Consensus 52 -------------------------------------------------------------------~~~~~v~~~~~~~ 64 (229)
T cd04192 52 -------------------------------------------------------------------KPNFQLKILNNSR 64 (229)
T ss_pred -------------------------------------------------------------------CCCcceEEeeccC
Confidence 0012355554432
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHH
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG 338 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (736)
+ ...||+.++|.|++. +++|+|+++|+|+++ +|++|++++..|.+++ .+.|+++..+... +.....
T Consensus 65 -~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~-~~~~l~~l~~~~~~~~----~~~v~~~~~~~~~--~~~~~~ 130 (229)
T cd04192 65 -V--SISGKKNALTTAIKA----AKGDWIVTTDADCVV-PSNWLLTFVAFIQKEQ----IGLVAGPVIYFKG--KSLLAK 130 (229)
T ss_pred -c--ccchhHHHHHHHHHH----hcCCEEEEECCCccc-CHHHHHHHHHHhhcCC----CcEEeeeeeecCC--ccHHHH
Confidence 1 257999999999999 889999999999986 5999999999887654 6778888766521 111111
Q ss_pred --HHHH-hhhhHHhHhhhcCCc-ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccch
Q 004691 339 --SLRS-GYRLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLS 414 (736)
Q Consensus 339 --~~~~-f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 414 (736)
..+. .......+..+++.+ .++|++.++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------------ 168 (229)
T cd04192 131 FQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFF------------------------------------------ 168 (229)
T ss_pred HHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHH------------------------------------------
Confidence 1111 111122223334443 456888899999982
Q ss_pred hhHHHhhhhhccceeeccccccccccccC--CCccchHHHHHHHHHcCc-EEEEeCCCCCeeeeccCCCHHHHHHHHHHH
Q 004691 415 NVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGW-TSTYLDPSRPQFLGTSTTNLNDVLIQGTRW 491 (736)
Q Consensus 415 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gw-rs~y~~~~~~~~~g~aP~tl~~~~~Qr~RW 491 (736)
+.+||++ ...+||.+..++++++|| ++.|++..........|.+++++++||+||
T Consensus 169 ----------------------~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw 226 (229)
T cd04192 169 ----------------------EVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRW 226 (229)
T ss_pred ----------------------HhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHh
Confidence 2467874 467899999999999999 998886444678889999999999999999
Q ss_pred hcc
Q 004691 492 ASG 494 (736)
Q Consensus 492 a~G 494 (736)
++|
T Consensus 227 ~~g 229 (229)
T cd04192 227 ASK 229 (229)
T ss_pred hcC
Confidence 988
No 31
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.92 E-value=3.2e-24 Score=222.42 Aligned_cols=225 Identities=19% Similarity=0.191 Sum_probs=165.3
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
.+..|+++|+||+ |||+ ..+.+++.++.+++||.++++|+|+|||++|.|.+.+.+
T Consensus 25 ~~~~~~isVvip~---~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~-------------------- 80 (251)
T cd06439 25 PAYLPTVTIIIPA---YNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE-------------------- 80 (251)
T ss_pred CCCCCEEEEEEec---CCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH--------------------
Confidence 5668999999999 8998 789999999999999998899999999999976532211
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
+.+ . +
T Consensus 81 ------------------------------~~~-------------------------------------------~--~ 85 (251)
T cd06439 81 ------------------------------YAD-------------------------------------------K--G 85 (251)
T ss_pred ------------------------------Hhh-------------------------------------------C--c
Confidence 000 0 1
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccC
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNF 330 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~ 330 (736)
+.++..++ +.+|++|+|.|++. +++|+|+++|+|.+++ |+++.+++..+.+++ +++|++.....+.
T Consensus 86 v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~ 151 (251)
T cd06439 86 VKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADPS----VGAVSGELVIVDG 151 (251)
T ss_pred EEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCCC----ccEEEeEEEecCC
Confidence 34444433 46899999999999 8899999999999975 999999999997665 8888877766543
Q ss_pred CcCChHHHHH-HHhhhhHHhHhhhcCC-cccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccccc
Q 004691 331 NEHDIYDGSL-RSGYRLQWPGMDGLKG-PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 408 (736)
Q Consensus 331 ~~~d~~~~~~-~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~ 408 (736)
+. ....... ..+...........+. ....|++..+||+++.
T Consensus 152 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------ 194 (251)
T cd06439 152 GG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR------------------------------------ 194 (251)
T ss_pred cc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc------------------------------------
Confidence 21 0111111 1111111111111222 2233444557888761
Q ss_pred CCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHH
Q 004691 409 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQG 488 (736)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr 488 (736)
|++.....||.++++++..+||++.|+++ +..+...|.+..++++|+
T Consensus 195 -------------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~ 241 (251)
T cd06439 195 -------------------------------PLPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEFRRR 241 (251)
T ss_pred -------------------------------CCCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHHHHH
Confidence 44555668999999999999999999986 688999999999999999
Q ss_pred HHHhccchhh
Q 004691 489 TRWASGLIDV 498 (736)
Q Consensus 489 ~RWa~G~~qi 498 (736)
.||+.|++|.
T Consensus 242 ~r~~~g~~~~ 251 (251)
T cd06439 242 VRIAAGNLQA 251 (251)
T ss_pred HHHHhccccC
Confidence 9999999983
No 32
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.92 E-value=5.9e-24 Score=217.76 Aligned_cols=229 Identities=18% Similarity=0.137 Sum_probs=161.4
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccc
Q 004691 96 AIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAY 175 (736)
Q Consensus 96 ~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~y 175 (736)
+|+|+||| |||+++.+.+|+.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~---~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPV---YDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEee---cCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 48999999 9998789999999999999 4 5799999999986543221100
Q ss_pred ccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEe
Q 004691 176 FSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVS 255 (736)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~ 255 (736)
..+.+.++
T Consensus 51 -----------------------------------------------------------------------~~~~~~v~- 58 (235)
T cd06434 51 -----------------------------------------------------------------------KYGGIFVI- 58 (235)
T ss_pred -----------------------------------------------------------------------cCCcEEEE-
Confidence 00123333
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCCh
Q 004691 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDI 335 (736)
Q Consensus 256 R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (736)
.++ ++||++|+|.|++. +++|+|+++|+|..+. |++|++++..|.|++ ++.|++.+.+.+.+ ...
T Consensus 59 ~~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~----v~~v~~~~~~~~~~-~~~ 123 (235)
T cd06434 59 TVP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDPK----VGGVGTNQRILRPR-DSK 123 (235)
T ss_pred ecC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCCC----EeEEcCceEeecCc-ccH
Confidence 222 57899999999998 8999999999999965 999999999998776 99999888777642 122
Q ss_pred HHHHHHHhhhh----HHhHhhhcCCc-ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCC
Q 004691 336 YDGSLRSGYRL----QWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (736)
Q Consensus 336 ~~~~~~~f~~~----~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 410 (736)
+......++.. ........++. .+.|...++||+++..... ...|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~---------------~~~~~-------------- 174 (235)
T cd06434 124 WSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLF---------------LEEFT-------------- 174 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhh---------------HHHhh--------------
Confidence 22111112211 11222223332 2346777899999842100 00000
Q ss_pred ccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHH
Q 004691 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
.+.++.......||.+++.+++++||+..|++. +.+....|+|+.++++||.|
T Consensus 175 -------------------------~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~R 227 (235)
T cd06434 175 -------------------------NETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKFLKQQLR 227 (235)
T ss_pred -------------------------hhhhcCCCCCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHHHHHhhh
Confidence 001222224678999999999999999999986 57788899999999999999
Q ss_pred Hhccchh
Q 004691 491 WASGLID 497 (736)
Q Consensus 491 Wa~G~~q 497 (736)
|++|..+
T Consensus 228 w~~~~~~ 234 (235)
T cd06434 228 WSRSNWR 234 (235)
T ss_pred hhhcccC
Confidence 9999864
No 33
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=1.3e-20 Score=204.87 Aligned_cols=203 Identities=18% Similarity=0.191 Sum_probs=155.0
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceecc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (736)
+.|-.|.+ +.+.||||+..-.+..| +..++++++|||+++. +|.+-+++..|+ ||+ .|.+||-..-.|
T Consensus 214 ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME~~P~----aGlIQt~P~~~g 282 (736)
T COG2943 214 IFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLMEANPD----AGLIQTSPKASG 282 (736)
T ss_pred eeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHhhCCC----CceeecchhhcC
Confidence 55544433 36789999999999988 8899999999999986 999999999886 555 999998765555
Q ss_pred CCcCChHHHHHH----HhhhhHHhHhhhcCCc--ccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhc
Q 004691 330 FNEHDIYDGSLR----SGYRLQWPGMDGLKGP--FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSY 403 (736)
Q Consensus 330 ~~~~d~~~~~~~----~f~~~~~~g~d~~~~~--~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~ 403 (736)
. +..|++.+. ++=.+.-.|...|++. -|-|.|+++|.++..+.
T Consensus 283 g--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~h----------------------------- 331 (736)
T COG2943 283 G--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEH----------------------------- 331 (736)
T ss_pred c--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHh-----------------------------
Confidence 3 356665544 2223556788888764 58999999999998530
Q ss_pred cccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHH
Q 004691 404 EHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLND 483 (736)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~ 483 (736)
|....-. ..+.|.+..++.|+..+--|.+.||.+--.+ +..-++++.|.|+.+
T Consensus 332 -----------------------cgLp~Lp---G~~pFgG~ilSHDfvEAALmRRaGW~v~ia~-dL~GSyEE~PpnLlD 384 (736)
T COG2943 332 -----------------------CGLPPLP---GRGPFGGHILSHDFVEAALMRRAGWGVWIAY-DLDGSYEELPPNLLD 384 (736)
T ss_pred -----------------------cCCCCCC---CCCCCCccccchHHHHHHHHhhcCceEEEec-cCCCchhhCCchHHH
Confidence 0000000 1244777889999999999999999876554 357899999999999
Q ss_pred HHHHHHHHhccchhhhhhhcCccccCCCCCChhHHHHHHhhhHhh
Q 004691 484 VLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFP 528 (736)
Q Consensus 484 ~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~ 528 (736)
++++-+||++|++|-++ ++. .+++++..|+.++.+.+.+
T Consensus 385 ~l~RDRRWC~GNLqh~r-----l~~-~~GlHwvsR~h~~tGVmsY 423 (736)
T COG2943 385 ELKRDRRWCHGNLQHFR-----LFL-VKGLHWVSRAHFLTGVMSY 423 (736)
T ss_pred HHhhhhHhhhcchhhce-----eec-cCCccHHHHHHHHHHHHHH
Confidence 99999999999999664 332 4899999999888766555
No 34
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.92 E-value=3.6e-22 Score=221.79 Aligned_cols=229 Identities=20% Similarity=0.122 Sum_probs=157.0
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
++..|+|+|+||+ |||+ +.+.+|+.|+++++||. +++|+|+||||+|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa---~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPA---RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEec---CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 4678999999999 9998 78999999999999996 489999999999987643322110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
. +| .-++
T Consensus 94 -----------------------------~----------------------~~----------------------~~~~ 100 (384)
T TIGR03469 94 -----------------------------A----------------------YG----------------------RGDR 100 (384)
T ss_pred -----------------------------h----------------------cC----------------------CCCc
Confidence 0 00 0013
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC-----CCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 325 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~-----g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq 325 (736)
+.++..+.+|. ...+|+.|+|.|++. ++ +|+++++|||+.+ +|+++++++..+.+++ ++.|....
T Consensus 101 i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~-~p~~l~~lv~~~~~~~----~~~vs~~~ 170 (384)
T TIGR03469 101 LTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAH-GPDNLARLVARARAEG----LDLVSLMV 170 (384)
T ss_pred EEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCC-ChhHHHHHHHHHHhCC----CCEEEecc
Confidence 45554333221 246999999999998 66 9999999999986 5999999999987654 55565433
Q ss_pred eeccCCcCChHHHH----HHHhhhhHH---hHhhhc-CCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHH
Q 004691 326 KFHNFNEHDIYDGS----LRSGYRLQW---PGMDGL-KGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIK 397 (736)
Q Consensus 326 ~f~n~~~~d~~~~~----~~~f~~~~~---~g~d~~-~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~ 397 (736)
++.. .+.+... ...++.... ...+.. ......|.+.++||+++.
T Consensus 171 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~------------------------- 222 (384)
T TIGR03469 171 RLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALE------------------------- 222 (384)
T ss_pred cccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHH-------------------------
Confidence 3321 1222111 111111110 011111 112346888899999982
Q ss_pred hhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccC--CCccchHHHHHHHHHcCcEEEEeCCCCCeeee
Q 004691 398 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLG 475 (736)
Q Consensus 398 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g 475 (736)
+.+||+. ..+.||++++.++.++|+++.+.... .....
T Consensus 223 ---------------------------------------~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~ 262 (384)
T TIGR03469 223 ---------------------------------------RIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSL 262 (384)
T ss_pred ---------------------------------------HcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEE
Confidence 2467774 57899999999999999999998653 33333
Q ss_pred ccCCCHHHHHHHHHHHh
Q 004691 476 TSTTNLNDVLIQGTRWA 492 (736)
Q Consensus 476 ~aP~tl~~~~~Qr~RWa 492 (736)
..-+++++.++|+.||+
T Consensus 263 r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 263 RPYDGLGEIWRMIARTA 279 (384)
T ss_pred EecCCHHHHHHHHHHhH
Confidence 45579999999999995
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.86 E-value=1.7e-20 Score=192.89 Aligned_cols=224 Identities=15% Similarity=0.097 Sum_probs=159.4
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccc
Q 004691 96 AIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAY 175 (736)
Q Consensus 96 ~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~y 175 (736)
+++|+||+ |||+ +.+.+++.++.+++||..+.+|+|+|||++|.|.+.+.+..
T Consensus 1 ~~sIiip~---~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPV---RNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEc---CCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 48999999 8998 68899999999999997789999999999996643221110
Q ss_pred ccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEe
Q 004691 176 FSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVS 255 (736)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~ 255 (736)
+ ..|.+.++.
T Consensus 54 -------------------------------------~---------------------------------~~~~v~~i~ 63 (249)
T cd02525 54 -------------------------------------A---------------------------------KDPRIRLID 63 (249)
T ss_pred -------------------------------------h---------------------------------cCCeEEEEe
Confidence 0 013456664
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCCh
Q 004691 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDI 335 (736)
Q Consensus 256 R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (736)
.+ ++++++|+|.|++. +++|+++++|+|.++ +|++|.+++..+.+++ +..|+++....+ .+.
T Consensus 64 ~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~-~~~~l~~~~~~~~~~~----~~~v~~~~~~~~---~~~ 125 (249)
T cd02525 64 NP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVY-PKDYILELVEALKRTG----ADNVGGPMETIG---ESK 125 (249)
T ss_pred CC------CCCchHHHHHHHHH----hCCCEEEEECCCccC-CHHHHHHHHHHHhcCC----CCEEecceecCC---CCh
Confidence 32 35789999999999 899999999999986 5999999998887655 555655543322 122
Q ss_pred HHHHHHHh----hhhHHhHhhhcC---CcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccccc
Q 004691 336 YDGSLRSG----YRLQWPGMDGLK---GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 408 (736)
Q Consensus 336 ~~~~~~~f----~~~~~~g~d~~~---~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~ 408 (736)
+....... +........... .....|.+.++||+++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 169 (249)
T cd02525 126 FQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFE------------------------------------ 169 (249)
T ss_pred HHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHH------------------------------------
Confidence 22111111 111000001111 22346777788888872
Q ss_pred CCccchhhHHHhhhhhccceeeccccccccccccCC-CccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHH
Q 004691 409 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQ 487 (736)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Q 487 (736)
+.+||+.. ...||.+.+++++++|+++.|++. +......|.+++.+.+|
T Consensus 170 ----------------------------~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~~ 219 (249)
T cd02525 170 ----------------------------KVGGFDESLVRNEDAELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLARQ 219 (249)
T ss_pred ----------------------------HhCCCCcccCccchhHHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHHH
Confidence 12345543 447999999999999999999986 57778889999999999
Q ss_pred HHHHhccchhhhh
Q 004691 488 GTRWASGLIDVSI 500 (736)
Q Consensus 488 r~RWa~G~~qi~~ 500 (736)
+.||+.|.+|...
T Consensus 220 ~~r~~~~~~~~~~ 232 (249)
T cd02525 220 YFRYGKWRARTLR 232 (249)
T ss_pred HHHHhhhhHHHHH
Confidence 9999999999887
No 36
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.81 E-value=1.3e-19 Score=179.85 Aligned_cols=161 Identities=21% Similarity=0.156 Sum_probs=114.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.++++++||.++++|+|+|||++|.|.+.+. +.+
T Consensus 1 VvIp~---~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~--------------~~~------------ 50 (183)
T cd06438 1 ILIPA---HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVAR--------------AAG------------ 50 (183)
T ss_pred CEEec---cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHH--------------HcC------------
Confidence 68999 9999 79999999999999998889999999999997653111 000
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
..++.+.+
T Consensus 51 ------------------------------------------------------------------------~~~~~~~~ 58 (183)
T cd06438 51 ------------------------------------------------------------------------ATVLERHD 58 (183)
T ss_pred ------------------------------------------------------------------------CeEEEeCC
Confidence 01112222
Q ss_pred CCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHH
Q 004691 259 SPEHLHHFKGGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~-~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (736)
. ++++|++|+|.+++.+. ..+++|+++++|||++++ |+++.+++..|.+. ...||+.....+.+. ..+.
T Consensus 59 ~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~-~~~~ 128 (183)
T cd06438 59 P---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNPDD-SWIT 128 (183)
T ss_pred C---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCCcc-CHHH
Confidence 1 25789999999998731 114699999999999975 99999999988642 346787666655322 2222
Q ss_pred HH----HHHhhhhHHhHhhhcCCc-ccccccceeehhhc
Q 004691 338 GS----LRSGYRLQWPGMDGLKGP-FLTGTGHYIRRESL 371 (736)
Q Consensus 338 ~~----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL 371 (736)
.. ...++.....++..+++. .+.|+|+++||+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 129 RLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 22 222334445566667764 46899999999999
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.81 E-value=4.2e-19 Score=177.87 Aligned_cols=164 Identities=18% Similarity=0.132 Sum_probs=120.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.++++++ | +++|+|+|||++|.|.+.+. .
T Consensus 1 ViIp~---~Ne~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~-~--------------------------- 45 (191)
T cd06436 1 VLVPC---LNEE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR-L--------------------------- 45 (191)
T ss_pred CEEec---cccH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh-h---------------------------
Confidence 68999 9998 79999999999999 5 48999999999997753211 0
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+ ...+++.++.++.
T Consensus 46 -----------------------~-------------------------------------------~~~~~v~~i~~~~ 59 (191)
T cd06436 46 -----------------------A-------------------------------------------ITDSRVHLLRRHL 59 (191)
T ss_pred -----------------------e-------------------------------------------ecCCcEEEEeccC
Confidence 0 0012456665532
Q ss_pred CCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCC
Q 004691 259 SPEHLHHFKGGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~-------~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 331 (736)
. + .+.+|++|+|.|++.+. ...++|+|+++|+|..++ |++|+++..+|.||+ ++.||++..+.|.+
T Consensus 60 ~-~-~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~ 132 (191)
T cd06436 60 P-N-ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDPR----VAGTQSRVRMYNRH 132 (191)
T ss_pred C-c-CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCCc----eEEEeeeEEEecCC
Confidence 1 1 24689999999999731 011358999999999865 999999888888876 99999999888754
Q ss_pred cCChHHH----HHHHhhhhHHhHhhhcCCcccccccceeehhhc
Q 004691 332 EHDIYDG----SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 371 (736)
Q Consensus 332 ~~d~~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL 371 (736)
.+ .+.. +....+..++.++...+...++|+|++|||++|
T Consensus 133 ~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 133 KN-LLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 32 3222 222334567788877776667899999999999
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.75 E-value=2e-17 Score=165.21 Aligned_cols=137 Identities=30% Similarity=0.426 Sum_probs=110.1
Q ss_pred EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhh----HHhHhhhcCCc-ccc
Q 004691 286 YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRL----QWPGMDGLKGP-FLT 360 (736)
Q Consensus 286 ~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~~-~~~ 360 (736)
+|+++|||+.++ ||++++++.+|.||+ +++||+|..+.|. ++...+.+...+.. .....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~~----~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDPK----VDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCCC----ceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999975 999999999998776 9999999998743 34444444444321 12233344443 467
Q ss_pred cccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccceeecccccccccc
Q 004691 361 GTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG 440 (736)
Q Consensus 361 Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G 440 (736)
|+|.++|++++. +.+|
T Consensus 74 G~~~~~r~~~l~----------------------------------------------------------------~vg~ 89 (193)
T PF13632_consen 74 GSGMLFRREALR----------------------------------------------------------------EVGG 89 (193)
T ss_pred CcceeeeHHHHH----------------------------------------------------------------HhCc
Confidence 999999999992 2358
Q ss_pred cc-CCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhccc
Q 004691 441 FS-YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGL 495 (736)
Q Consensus 441 ~~-~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 495 (736)
|+ ..+++||+++++++.++||++.|+++ +.+++.+|+|+.++++||+||..|.
T Consensus 90 ~~~~~~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 90 FDDPFSIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred ccccccccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 99 89999999999999999999999986 4689999999999999999999998
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.74 E-value=3.6e-17 Score=163.44 Aligned_cols=193 Identities=16% Similarity=0.157 Sum_probs=132.7
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+.+.+.+|+.|+++++||. .+|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsiii~~---~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPV---YNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEec---ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 789999999 8998668999999999999986 789999999998554322211
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEE
Q 004691 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
|.+ ..+.+.++
T Consensus 53 --------------------------~~~-------------------------------------------~~~~~~~~ 63 (202)
T cd04184 53 --------------------------YAA-------------------------------------------QDPRIKVV 63 (202)
T ss_pred --------------------------HHh-------------------------------------------cCCCEEEE
Confidence 100 01234555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcC
Q 004691 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEH 333 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~ 333 (736)
..++ +.+++.|+|.|++. +++|+++++|+|.++ +|++|.+++..| .+++ ++.|.+.......+..
T Consensus 64 ~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~-~~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~~ 129 (202)
T cd04184 64 FREE-----NGGISAATNSALEL----ATGEFVALLDHDDEL-APHALYEVVKALNEHPD----ADLIYSDEDKIDEGGK 129 (202)
T ss_pred Eccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcC-ChHHHHHHHHHHHhCCC----CCEEEccHHhccCCCC
Confidence 4433 57899999999999 889999999999986 599999999988 5665 6777655433221100
Q ss_pred ChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccc
Q 004691 334 DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 413 (736)
Q Consensus 334 d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
.... .+..... .+......+.|.++++||+++.
T Consensus 130 -~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~----------------------------------------- 162 (202)
T cd04184 130 -RSEP----FFKPDWS-PDLLLSQNYIGHLLVYRRSLVR----------------------------------------- 162 (202)
T ss_pred -Eecc----ccCCCCC-HHHhhhcCCccceEeEEHHHHH-----------------------------------------
Confidence 0000 0000000 0111122345667789999882
Q ss_pred hhhHHHhhhhhccceeeccccccccccccCC-CccchHHHHHHHHHcCcEEEEeCC
Q 004691 414 SNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.+ ...||.+.++|++.+||+..|+++
T Consensus 163 -----------------------~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 163 -----------------------QVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred -----------------------HhCCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 23567654 457999999999999999999986
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.71 E-value=2.6e-16 Score=157.30 Aligned_cols=189 Identities=17% Similarity=0.168 Sum_probs=130.6
Q ss_pred EEEEecCCCCCCc-hHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004691 98 DVFICTADPEKEP-TFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (736)
Q Consensus 98 dV~Vpt~~pynEp-~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf 176 (736)
+|+||| |||+ ++.+++|+.|+++++||. .+|+|+|||+++.+...+.+
T Consensus 1 sviip~---~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~-------------------------- 49 (201)
T cd04195 1 SVLMSV---YIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE-------------------------- 49 (201)
T ss_pred CEEEEc---cccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH--------------------------
Confidence 589999 7775 468999999999999995 58999999995432221111
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEec
Q 004691 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSR 256 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R 256 (736)
.|.+ ..| +.++..
T Consensus 50 -----------------------~~~~-------------------------------------------~~~-i~~i~~ 62 (201)
T cd04195 50 -----------------------EFKR-------------------------------------------KLP-LKVVPL 62 (201)
T ss_pred -----------------------HHHh-------------------------------------------cCC-eEEEEc
Confidence 1100 012 566665
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcCCh
Q 004691 257 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDI 335 (736)
Q Consensus 257 ~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (736)
++ +.|+++|+|.|++. ++||+|+++|+|.+++ |+++.+++..|. +|+ +++|.+.....+.+....
T Consensus 63 ~~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 128 (201)
T cd04195 63 EK-----NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKNPE----IDIVGGGVLEFDSDGNDI 128 (201)
T ss_pred Cc-----cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhCCC----eEEEcccEEEECCCCCee
Confidence 54 46899999999999 8999999999999875 999999999886 344 888887765543322111
Q ss_pred HHHH----HHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCc
Q 004691 336 YDGS----LRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGE 411 (736)
Q Consensus 336 ~~~~----~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 411 (736)
.... ....... . ......+|.+.++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~rr~~~~--------------------------------------- 163 (201)
T cd04195 129 GKRRLPTSHDDILKF---A---RRRSPFNHPTVMFRKSKVL--------------------------------------- 163 (201)
T ss_pred ccccCCCCHHHHHHH---h---ccCCCCCChHHhhhHHHHH---------------------------------------
Confidence 1000 0001110 0 1122235566788998872
Q ss_pred cchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCC
Q 004691 412 NLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 412 ~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.....||.++.+++..+|+++.|+++
T Consensus 164 -------------------------~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 164 -------------------------AVGGYQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred -------------------------HcCCcCCCCCchHHHHHHHHHHcCCceecccH
Confidence 23568777889999999999999999999975
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.67 E-value=1.4e-15 Score=163.04 Aligned_cols=110 Identities=16% Similarity=0.049 Sum_probs=87.7
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004691 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||+ |||+++.+.+||.|++++.+|....+|+|+||||+|.|.+.+.+..
T Consensus 1 SIIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~------------------------- 52 (299)
T cd02510 1 SVIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY------------------------- 52 (299)
T ss_pred CEEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH-------------------------
Confidence 589999 9998789999999999999987667999999999997754322100
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEecc
Q 004691 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
. ....|++.++..+
T Consensus 53 ------------------------~------------------------------------------~~~~~~v~vi~~~ 66 (299)
T cd02510 53 ------------------------Y------------------------------------------KKYLPKVKVLRLK 66 (299)
T ss_pred ------------------------H------------------------------------------hhcCCcEEEEEcC
Confidence 0 0012346777554
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004691 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
+ +.|++.|.|.|++. ++||+|+++|+|+.+ +|++|.+++..+..
T Consensus 67 ~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~-~~~wL~~ll~~l~~ 110 (299)
T cd02510 67 K-----REGLIRARIAGARA----ATGDVLVFLDSHCEV-NVGWLEPLLARIAE 110 (299)
T ss_pred C-----CCCHHHHHHHHHHH----ccCCEEEEEeCCccc-CccHHHHHHHHHHh
Confidence 4 47899999999999 899999999999997 59999999998864
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.67 E-value=1.4e-15 Score=150.42 Aligned_cols=186 Identities=17% Similarity=0.107 Sum_probs=128.4
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004691 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+ +.+.+++.++.+++||. ++|+|+|||++|.|.+.+.+.
T Consensus 1 sivi~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~-------------------------- 48 (202)
T cd06433 1 SIITPT---YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKY-------------------------- 48 (202)
T ss_pred CEEEec---cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHh--------------------------
Confidence 489999 9998 79999999999999986 899999999999765322110
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEecc
Q 004691 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
.+ ...++..+
T Consensus 49 ------------------------~~----------------------------------------------~~~~~~~~ 58 (202)
T cd06433 49 ------------------------ED----------------------------------------------KITYWISE 58 (202)
T ss_pred ------------------------Hh----------------------------------------------hcEEEEec
Confidence 00 01233333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCChH
Q 004691 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (736)
+ ..++++|+|.|++. +++|+|+++|+|.++. |+.+.+++..+ .+++ .++|.+...+.+.+.....
T Consensus 59 ~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~~----~~~v~g~~~~~~~~~~~~~ 124 (202)
T cd06433 59 P-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHPE----VDVVYGDVLLVDENGRVIG 124 (202)
T ss_pred C-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCCC----ccEEEeeeEEEcCCCCccc
Confidence 3 46899999999999 8999999999999875 89999988444 4544 6777666554433221110
Q ss_pred HHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhh
Q 004691 337 DGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNV 416 (736)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 416 (736)
... ...............+|++.++||+++.
T Consensus 125 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 155 (202)
T cd06433 125 RRR-----PPPFLDKFLLYGMPICHQATFFRRSLFE-------------------------------------------- 155 (202)
T ss_pred CCC-----CcchhhhHHhhcCcccCcceEEEHHHHH--------------------------------------------
Confidence 000 0001111222344567788899999882
Q ss_pred HHHhhhhhccceeeccccccccccccCC-CccchHHHHHHHHHcCcEEEEeCC
Q 004691 417 LQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 417 ~~~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.+ ...||.+..+++..+|+++.++++
T Consensus 156 --------------------~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 156 --------------------KYGGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred --------------------HhCCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 12346543 567999999999999999998875
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.66 E-value=7e-15 Score=152.80 Aligned_cols=123 Identities=14% Similarity=0.104 Sum_probs=88.9
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004691 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||+ |||+ +.+..++.++.+...+...++|+|+||||+|.|.+.+.+.+
T Consensus 7 ~~~~vsVvIp~---yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~-------------------- 62 (243)
T PLN02726 7 GAMKYSIIVPT---YNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQ-------------------- 62 (243)
T ss_pred CCceEEEEEcc---CCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHH--------------------
Confidence 45899999999 9998 57788887776543222368999999999998864332211
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEE
Q 004691 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
+.|. -+.+.
T Consensus 63 --------------------------~~~~---------------------------------------------~~~v~ 71 (243)
T PLN02726 63 --------------------------KVYG---------------------------------------------EDRIL 71 (243)
T ss_pred --------------------------HhcC---------------------------------------------CCcEE
Confidence 0000 01245
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004691 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 324 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~P 324 (736)
++.+++ +.||++|+|.|++. ++||+|+++|+|... +|++|.+++..+.+++ .+.|.+.
T Consensus 72 ~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~l~~~~~~~~----~~~v~g~ 129 (243)
T PLN02726 72 LRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSH-HPKYLPSFIKKQRETG----ADIVTGT 129 (243)
T ss_pred EEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCC-CHHHHHHHHHHHHhcC----CcEEEEc
Confidence 554433 46899999999998 899999999999986 5999999999887544 5556554
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.64 E-value=5.2e-15 Score=148.59 Aligned_cols=161 Identities=18% Similarity=0.144 Sum_probs=107.0
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004691 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+ ..+.+++.|+++++|| +++|+|+|||++|.|.+.+.+.++ +
T Consensus 1 sIvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~----------~------------- 51 (214)
T cd04196 1 AVLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID----------K------------- 51 (214)
T ss_pred CEEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh----------c-------------
Confidence 589999 9998 7899999999999999 489999999999987643332110 0
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEecc
Q 004691 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
|| +.+.++..+
T Consensus 52 ---------------------------------------------~~------------------------~~~~~~~~~ 62 (214)
T cd04196 52 ---------------------------------------------DP------------------------FIIILIRNG 62 (214)
T ss_pred ---------------------------------------------CC------------------------ceEEEEeCC
Confidence 00 123444343
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCChH
Q 004691 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (736)
+ .+|+++|+|.|+.. ++||+|+++|+|.+.. |+.|.+++..+ .++. .+++.+.....+.+.. ..
T Consensus 63 ~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~ 127 (214)
T cd04196 63 K-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDDK----PLLVYSDLELVDENGN-PI 127 (214)
T ss_pred C-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCCC----ceEEecCcEEECCCCC-Cc
Confidence 3 57999999999998 8999999999999865 99999999984 4444 6777776554432211 11
Q ss_pred HHHHHHhhhh--HHhHhhhcCCcccccccceeehhhc
Q 004691 337 DGSLRSGYRL--QWPGMDGLKGPFLTGTGHYIRRESL 371 (736)
Q Consensus 337 ~~~~~~f~~~--~~~g~d~~~~~~~~Gtg~~~RR~AL 371 (736)
.......... ..............|+++++||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 164 (214)
T cd04196 128 GESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELL 164 (214)
T ss_pred ccccccccccCCccCHHHHHHhCccCCceeeEEHHHH
Confidence 0000000000 0011111223345788899999988
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.61 E-value=2.1e-14 Score=145.45 Aligned_cols=178 Identities=19% Similarity=0.109 Sum_probs=120.3
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004691 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (736)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf 176 (736)
|+|+||+ |||+ +.+.+++.|++++.|+ ..+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~---~n~~-~~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPT---LNEA-ENLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEc---cCcH-HHHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHHhc--------------------------
Confidence 6899999 9998 5889999999999985 489999999999865421110
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEec
Q 004691 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSR 256 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R 256 (736)
+++.++..
T Consensus 49 ------------------------------------------------------------------------~~~~~~~~ 56 (221)
T cd02522 49 ------------------------------------------------------------------------AGVVVISS 56 (221)
T ss_pred ------------------------------------------------------------------------CCeEEEeC
Confidence 12344422
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChH
Q 004691 257 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (736)
Q Consensus 257 ~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (736)
..+|++|+|.|++. +++|+|+++|+|..+ +|+++.+++..+.++. ...+.....+.+. +..
T Consensus 57 -------~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~-~~~~l~~l~~~~~~~~----~~~~~~~~~~~~~---~~~ 117 (221)
T cd02522 57 -------PKGRARQMNAGAAA----ARGDWLLFLHADTRL-PPDWDAAIIETLRADG----AVAGAFRLRFDDP---GPR 117 (221)
T ss_pred -------CcCHHHHHHHHHHh----ccCCEEEEEcCCCCC-ChhHHHHHHHHhhcCC----cEEEEEEeeecCC---ccc
Confidence 24699999999998 889999999999986 4999999876665443 3333322333322 111
Q ss_pred HHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhh
Q 004691 337 DGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNV 416 (736)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 416 (736)
... .......+....+..+.+.|.++||+++.
T Consensus 118 ~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-------------------------------------------- 149 (221)
T cd02522 118 LRL----LELGANLRSRLFGLPYGDQGLFIRRELFE-------------------------------------------- 149 (221)
T ss_pred hhh----hhhcccceecccCCCcCCceEEEEHHHHH--------------------------------------------
Confidence 110 00000011111122234557788888772
Q ss_pred HHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEE
Q 004691 417 LQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTY 465 (736)
Q Consensus 417 ~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y 465 (736)
+.+||++....||++..+|+..+|+++.+
T Consensus 150 --------------------~~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 150 --------------------ELGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred --------------------HhCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 24678887799999999999999999876
No 46
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.60 E-value=4e-14 Score=143.72 Aligned_cols=115 Identities=17% Similarity=0.114 Sum_probs=86.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ ..+.+++.++.++.|+ ...+|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPT---YNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEec---cchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 68999 9998 6899999999999983 3489999999999977532111
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
|.+ ..|.+.++..++
T Consensus 48 ----------------------~~~-------------------------------------------~~~~i~~~~~~~ 62 (224)
T cd06442 48 ----------------------LAK-------------------------------------------EYPRVRLIVRPG 62 (224)
T ss_pred ----------------------HHH-------------------------------------------hCCceEEEecCC
Confidence 100 012234454444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCc
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 325 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq 325 (736)
+.||++|+|.|++. +.||+|+++|+|..+ +|+.|.+++..+.+++ .+.|.++.
T Consensus 63 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~~----~~~v~g~~ 115 (224)
T cd06442 63 -----KRGLGSAYIEGFKA----ARGDVIVVMDADLSH-PPEYIPELLEAQLEGG----ADLVIGSR 115 (224)
T ss_pred -----CCChHHHHHHHHHH----cCCCEEEEEECCCCC-CHHHHHHHHHHHhcCC----CCEEEEee
Confidence 57899999999999 899999999999986 5999999999876554 44555443
No 47
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.60 E-value=5.2e-14 Score=143.37 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=82.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.|+++++||. .++|+|+|||++|.|.+.+.+.. ++
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~----------~~-------------- 51 (219)
T cd06913 1 IILPV---HNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWR----------KK-------------- 51 (219)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHH----------Hh--------------
Confidence 68999 9998 79999999999999994 59999999999998754322110 00
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+ ..+++.++..+.
T Consensus 52 ----------------------~---------------------------------------------~~~~~~~~~~~~ 64 (219)
T cd06913 52 ----------------------L---------------------------------------------EDSGVIVLVGSH 64 (219)
T ss_pred ----------------------C---------------------------------------------cccCeEEEEecc
Confidence 0 001244444332
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
+.+ .+.|.+.|+|.|++. ++||+++++|+|..++ |+.+.+.+..+.+
T Consensus 65 ~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~ 111 (219)
T cd06913 65 NSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQ 111 (219)
T ss_pred cCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHh
Confidence 211 246899999999998 8999999999999865 9999888776653
No 48
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.59 E-value=4.1e-14 Score=138.94 Aligned_cols=107 Identities=18% Similarity=0.152 Sum_probs=79.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.|+.+++|+. .+|+|+|||++|.|.+.+.+..
T Consensus 1 ivip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~-------------------------- 48 (182)
T cd06420 1 LIITT---YNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFK-------------------------- 48 (182)
T ss_pred CEEee---cCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHH--------------------------
Confidence 68999 9998 68999999999999886 6899999999996643221110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+. . .. .++++.+++
T Consensus 49 ------------------------~~---------~--------------------------------~~-~~~~~~~~~ 62 (182)
T cd06420 49 ------------------------SQ---------F--------------------------------PI-PIKHVWQED 62 (182)
T ss_pred ------------------------hh---------c--------------------------------CC-ceEEEEcCC
Confidence 00 0 00 134443432
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 313 (736)
+..+|++++|.|++. ++||+|+++|+|.++ +|++|.+++..+ ++.
T Consensus 63 ----~~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~~~~~~-~~~ 107 (182)
T cd06420 63 ----EGFRKAKIRNKAIAA----AKGDYLIFIDGDCIP-HPDFIADHIELA-EPG 107 (182)
T ss_pred ----cchhHHHHHHHHHHH----hcCCEEEEEcCCccc-CHHHHHHHHHHh-CCC
Confidence 134799999999999 899999999999986 599999999877 443
No 49
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.59 E-value=2.3e-14 Score=137.39 Aligned_cols=157 Identities=20% Similarity=0.222 Sum_probs=119.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.++.+++||. .+|+|+|||+++.|.+.+.+..
T Consensus 1 vii~~---~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVN---YNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEe---cCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 58999 8996 79999999999999954 7899999999986543221100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+++.++..++
T Consensus 49 ----------------------------------------------------------------------~~~~~~~~~~ 58 (166)
T cd04186 49 ----------------------------------------------------------------------PEVRLIRNGE 58 (166)
T ss_pred ----------------------------------------------------------------------CCeEEEecCC
Confidence 0234444433
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHH
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG 338 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (736)
+.|+++|+|.+++. +++|+++++|+|.+++ |+++.+++..+.+ .++++.+++.
T Consensus 59 -----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~---~~~~~~~~~~-------------- 111 (166)
T cd04186 59 -----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQ---DPDVGIVGPK-------------- 111 (166)
T ss_pred -----CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHh---CCCceEEEcc--------------
Confidence 56899999999999 7899999999999865 9999999886652 2237777532
Q ss_pred HHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHH
Q 004691 339 SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (736)
Q Consensus 339 ~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
++|++.++||+++.
T Consensus 112 --------------------~~~~~~~~~~~~~~---------------------------------------------- 125 (166)
T cd04186 112 --------------------VSGAFLLVRREVFE---------------------------------------------- 125 (166)
T ss_pred --------------------CceeeEeeeHHHHH----------------------------------------------
Confidence 57888899999882
Q ss_pred HhhhhhccceeeccccccccccccCC--CccchHHHHHHHHHcCcEEEEeCC
Q 004691 419 QETEVLASCSYEHQTKWGEEVGFSYQ--SVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~~g~~~G~~~~--svtED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.. ...||.+.++++.++||++.+++.
T Consensus 126 ------------------~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 126 ------------------EVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred ------------------HcCCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 12345543 256999999999999999999985
No 50
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.58 E-value=2.9e-14 Score=155.39 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=87.8
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004691 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~ 173 (736)
.|.|+|+||+ ||++ +.+.+|+.|+++++|+. ++|+|+||||+|.|.+.+.+.+
T Consensus 5 ~p~vSVIIP~---yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~~~--------------------- 57 (328)
T PRK10073 5 TPKLSIIIPL---YNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKHYA--------------------- 57 (328)
T ss_pred CCeEEEEEec---cCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHHHH---------------------
Confidence 4889999999 9998 79999999999999985 8999999999997754322110
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEE
Q 004691 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
+ ..|++.+
T Consensus 58 -----------------------------~-------------------------------------------~~~~i~v 65 (328)
T PRK10073 58 -----------------------------E-------------------------------------------NYPHVRL 65 (328)
T ss_pred -----------------------------h-------------------------------------------hCCCEEE
Confidence 0 1134566
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004691 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~ 312 (736)
+.. + ++|.++|.|.|++. ++||||+++|+|..+. |+.+.+++..+.++
T Consensus 66 i~~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~ 113 (328)
T PRK10073 66 LHQ-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED 113 (328)
T ss_pred EEC-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC
Confidence 643 2 46899999999999 9999999999999975 99999999877643
No 51
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.57 E-value=3e-14 Score=141.55 Aligned_cols=153 Identities=21% Similarity=0.234 Sum_probs=116.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHH-H
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR-S 342 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~-~ 342 (736)
-+.|.+||..+++. . +++|++++.|+|..++ |++|++++..+.||+ +|.|.++....+. +.+....+ .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~---~~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA---RGFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC---cCHHHHHHHH
Confidence 57899999999996 3 7899999999999975 999999999999987 9999877665543 23333322 2
Q ss_pred hhhhHHhHhh-hcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhh
Q 004691 343 GYRLQWPGMD-GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQET 421 (736)
Q Consensus 343 f~~~~~~g~d-~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 421 (736)
++........ .-+..++.|..+.+||++|.
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~------------------------------------------------- 114 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALE------------------------------------------------- 114 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHH-------------------------------------------------
Confidence 2221111111 12456778999999999992
Q ss_pred hhhccceeeccccccccccccC--CCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccC----CCHHHHHHHHHHHhc
Q 004691 422 EVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST----TNLNDVLIQGTRWAS 493 (736)
Q Consensus 422 ~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP----~tl~~~~~Qr~RWa~ 493 (736)
+.+||.. +.+.||+.+|-+++++|||++..+. ++.....| .+++++++++.||++
T Consensus 115 ---------------~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 115 ---------------EIGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ---------------HcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 2356664 7899999999999999999999874 45556666 589999999999985
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.53 E-value=2.2e-13 Score=136.51 Aligned_cols=117 Identities=14% Similarity=0.083 Sum_probs=87.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||| |||+ +.+.+++.|++++.||. .+|+|+|||++|.|.+.+.+..
T Consensus 1 viI~~---~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~-------------------------- 48 (202)
T cd04185 1 AVVVT---YNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLG-------------------------- 48 (202)
T ss_pred CEEEe---eCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhc--------------------------
Confidence 68999 9998 78999999999999995 5799999999997653221100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
...| +.++..++
T Consensus 49 -------------------------------------------------------------------~~~~-i~~~~~~~ 60 (202)
T cd04185 49 -------------------------------------------------------------------DLDN-IVYLRLPE 60 (202)
T ss_pred -------------------------------------------------------------------CCCc-eEEEECcc
Confidence 0011 45555444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCcee
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKF 327 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f 327 (736)
..|++.++|.+++.+- .+++|+++++|+|.+++ |+++++++..+.+++ ++.+ +|..+
T Consensus 61 -----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~----~~~~-~~~~~ 117 (202)
T cd04185 61 -----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKDN----PQFL-APLVL 117 (202)
T ss_pred -----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCC----ceEe-cceeE
Confidence 4578999999998632 25799999999999865 999999999887665 7776 34433
No 53
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.52 E-value=3.9e-13 Score=136.08 Aligned_cols=108 Identities=20% Similarity=0.129 Sum_probs=81.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCC--CCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dY--P~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf 176 (736)
|+||+ |||+ ..+.+++.++.++.+ +....+|+|+||||+|.|.+.+.+..
T Consensus 1 iiip~---yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~------------------------ 52 (211)
T cd04188 1 VVIPA---YNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLA------------------------ 52 (211)
T ss_pred CEEcc---cChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHH------------------------
Confidence 68999 9998 789999999998865 44458999999999997754322110
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe-EEEEe
Q 004691 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL-LVYVS 255 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~-l~yv~ 255 (736)
+ ..|. +.++.
T Consensus 53 --------------------------~-------------------------------------------~~~~~i~~i~ 63 (211)
T cd04188 53 --------------------------R-------------------------------------------KNPALIRVLT 63 (211)
T ss_pred --------------------------H-------------------------------------------hCCCcEEEEE
Confidence 0 0011 24554
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004691 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (736)
Q Consensus 256 R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 313 (736)
.++ ..||++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.++.
T Consensus 64 ~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~ 111 (211)
T cd04188 64 LPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTSG 111 (211)
T ss_pred ccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC
Confidence 433 35899999999999 8999999999999864 999999999865443
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.51 E-value=9e-14 Score=132.61 Aligned_cols=160 Identities=28% Similarity=0.338 Sum_probs=103.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.+++++.|+. .+|+|+|||+++.|.+.+.+..
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~-------------------------- 48 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELA-------------------------- 48 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHh--------------------------
Confidence 67999 9998 89999999999999964 7899999999997654222110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
.+ ..+.+.++..++
T Consensus 49 -----------------------~~-------------------------------------------~~~~~~~~~~~~ 62 (180)
T cd06423 49 -----------------------AL-------------------------------------------YIRRVLVVRDKE 62 (180)
T ss_pred -----------------------cc-------------------------------------------ccceEEEEEecc
Confidence 00 001244554443
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcCChHH
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (736)
+.||+.|+|.|++. +++|+|+++|+|..+. |++|.+++..+ .+++ ++.|.......+... ..+.
T Consensus 63 -----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~-~~~~ 127 (180)
T cd06423 63 -----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADPK----VGAVQGRVRVRNGSE-NLLT 127 (180)
T ss_pred -----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCCC----eeeEeeeEEEecCcC-ccee
Confidence 57899999999999 7999999999999875 99999985544 4544 777765554433210 1111
Q ss_pred HHHHH----hhhhHHhHhhhcCC-cccccccceeehhhc
Q 004691 338 GSLRS----GYRLQWPGMDGLKG-PFLTGTGHYIRRESL 371 (736)
Q Consensus 338 ~~~~~----f~~~~~~g~d~~~~-~~~~Gtg~~~RR~AL 371 (736)
..... .......+....+. ..+.|++.++||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 166 (180)
T cd06423 128 RLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREAL 166 (180)
T ss_pred ccchheecceeeeeeehhheecceeecCchHHHHHHHHH
Confidence 11110 01111111111222 446788889999988
No 55
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.50 E-value=8.2e-13 Score=138.43 Aligned_cols=48 Identities=19% Similarity=0.121 Sum_probs=39.8
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCC-CCCCceEEEEEcCCCCccchH
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLR 146 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~d-YP~~kl~v~v~DDg~~~~T~~ 146 (736)
|.|+|+||| |||+ +.+.+|+.|+.++. .+...++|+|+||||+|.|.+
T Consensus 1 ~~vSVIi~~---yN~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVA---FRNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEe---CCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 679999999 9997 78999999998642 233358999999999998764
No 56
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.50 E-value=4.8e-13 Score=142.54 Aligned_cols=109 Identities=16% Similarity=0.253 Sum_probs=85.7
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004691 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+||.|+++++||. ++|+|+||||++ .+.+.+..
T Consensus 3 ~~p~VSVIip~---yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPT---WNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEe---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 35899999999 9998 57889999999999996 899999999984 21111110
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEE
Q 004691 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
++. .-|++.
T Consensus 55 -----------------------------~~~------------------------------------------~~~ri~ 63 (279)
T PRK10018 55 -----------------------------TAL------------------------------------------NDPRIT 63 (279)
T ss_pred -----------------------------HHc------------------------------------------CCCCEE
Confidence 000 013577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
|+..++ +.|+++|+|.|++. ++||||+++|+|.... |+.|.+++.++.
T Consensus 64 ~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 64 YIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 776544 57899999999999 8999999999999975 999999888765
No 57
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.50 E-value=1.3e-13 Score=141.29 Aligned_cols=139 Identities=18% Similarity=0.171 Sum_probs=86.0
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCC---CEEEEeCCCCCCCchHHHHHHH---Hhh-cCCCCCCceEEEcc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNS---PYILGLDCDMYCNDPTSARQAM---CFH-LDPKTSSSLAFVQF 323 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g---~~Il~lDAD~~~~~p~~L~~~v---~~f-~D~~~~~~vg~VQ~ 323 (736)
+.++..++ +.|+++|+|.|++. +.+ |+++++|+|..+ +|++|.+++ ..+ .++ .++.+ +
T Consensus 49 i~~i~~~~-----n~G~~~a~N~g~~~----a~~~~~d~v~~lD~D~~~-~~~~l~~l~~~~~~~~~~~----~~~~~-~ 113 (237)
T cd02526 49 IELIHLGE-----NLGIAKALNIGIKA----ALENGADYVLLFDQDSVP-PPDMVEKLLAYKILSDKNS----NIGAV-G 113 (237)
T ss_pred EEEEECCC-----ceehHHhhhHHHHH----HHhCCCCEEEEECCCCCc-CHhHHHHHHHHHHhhccCC----CeEEE-e
Confidence 56665554 46799999999998 544 999999999996 499999985 322 233 36655 5
Q ss_pred CceeccCCcCChHHHHHHH-hhhhHHhHhhh-cCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhh
Q 004691 324 PQKFHNFNEHDIYDGSLRS-GYRLQWPGMDG-LKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQ 401 (736)
Q Consensus 324 Pq~f~n~~~~d~~~~~~~~-f~~~~~~g~d~-~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~ 401 (736)
|+................. .+......... .......|+|+++||+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~----------------------------- 164 (237)
T cd02526 114 PRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALE----------------------------- 164 (237)
T ss_pred eeEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHH-----------------------------
Confidence 5544322111000000000 00000000111 1223456888999999882
Q ss_pred hccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCc--cchHHHHHHHHHcCcEEEEeCC
Q 004691 402 SYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV--SEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sv--tED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.... .||++.++|+..+||+..|++.
T Consensus 165 -----------------------------------~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 165 -----------------------------------KVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred -----------------------------------HhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 1356765432 5899999999999999999986
No 58
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.49 E-value=9.9e-12 Score=141.23 Aligned_cols=166 Identities=17% Similarity=0.216 Sum_probs=105.7
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcCChHH--HHHHHhh-hhHHhHhhhcCCc
Q 004691 282 SNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYD--GSLRSGY-RLQWPGMDGLKGP 357 (736)
Q Consensus 282 t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d~~~--~~~~~f~-~~~~~g~d~~~~~ 357 (736)
...|||+.+|||+.+ +|+++.+++.-+. ||+ ++.|.+.-+..|...+ ... +..+++. ...+++..+.-|.
T Consensus 200 ~~~~~il~~DaDt~~-~p~~~~~lv~~m~~d~~----i~gvCG~t~i~n~~~s-~~t~~Q~fEY~ish~l~Ka~Es~fG~ 273 (527)
T PF03142_consen 200 DFYEYILMVDADTKF-DPDSVNRLVDAMERDPK----IGGVCGETRIDNKGQS-WWTMYQVFEYAISHHLQKAFESVFGS 273 (527)
T ss_pred cceEEEEEecCCceE-cHHHHHHHHHHHcCCCC----eEEEeceeEEcCCCCC-HhhheeccchhHHHHHHHHHHHHhCc
Confidence 345999999999986 6999999998875 565 8888877666665322 221 2222222 2344455554343
Q ss_pred ccc--cccceeehhhccCC-----ccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccceee
Q 004691 358 FLT--GTGHYIRRESLYGN-----FKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYE 430 (736)
Q Consensus 358 ~~~--Gtg~~~RR~AL~~~-----~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye 430 (736)
..| |.-+++|-+|+... |... + .++-++|.. .
T Consensus 274 VtCLPGcfsmyR~~a~~~~~~~~~p~l~--~-~~i~~~Y~~--------------~------------------------ 312 (527)
T PF03142_consen 274 VTCLPGCFSMYRISALMDGDGYWVPLLI--S-PDIIEKYSE--------------N------------------------ 312 (527)
T ss_pred eeecCCcceeeeeehhcccccccccccc--c-hHHHHHHhh--------------c------------------------
Confidence 333 66668999998641 1000 0 001111100 0
Q ss_pred cccccccccc-ccCCCccchHHHHHHHHHc--CcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhccchhhhh
Q 004691 431 HQTKWGEEVG-FSYQSVSEDFFTGFILHCK--GWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSI 500 (736)
Q Consensus 431 ~~t~~g~~~G-~~~~svtED~~t~~rl~~~--Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~ 500 (736)
.. +..- ..-..+.||=.++-.|.++ |||..|++. +.+...+|+|++.+++||+||..|.+-.++
T Consensus 313 -~~---dtlh~~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 313 -PV---DTLHQKNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred -cc---hHHHHHhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 00 0000 0113578999888777776 899999986 689999999999999999999999986543
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.45 E-value=1.1e-13 Score=131.97 Aligned_cols=163 Identities=18% Similarity=0.091 Sum_probs=106.4
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004691 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+ +.+.+|+.|++.+.++ ..+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~---~n~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPT---YNEA-EYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEE---SS-T-TTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEe---eCCH-HHHHHHHHHHhhccCC--CEEEEEeccccccccccccccccc------------------------
Confidence 699999 8996 7999999999999555 488999999999876543222110
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEecc
Q 004691 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
..+++.|+.++
T Consensus 51 ---------------------------------------------------------------------~~~~i~~i~~~ 61 (169)
T PF00535_consen 51 ---------------------------------------------------------------------SDPNIRYIRNP 61 (169)
T ss_dssp ---------------------------------------------------------------------CSTTEEEEEHC
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 01257888887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHH
Q 004691 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (736)
++ .++++|+|.|++. ++++|++++|+|.+++ |++|.+++..+.+.. ..+..........+........
T Consensus 62 ~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 129 (169)
T PF00535_consen 62 EN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRL 129 (169)
T ss_dssp CC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCC
T ss_pred cc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecCCcccccccc
Confidence 63 5899999999999 8999999999999975 899999999998633 1232222222222111000000
Q ss_pred H--HHHHhhhhHHhHhhhcCCcccccccceeehhhc
Q 004691 338 G--SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 371 (736)
Q Consensus 338 ~--~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL 371 (736)
. .....+..............++|+++++||+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 165 (169)
T PF00535_consen 130 RFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVF 165 (169)
T ss_dssp TSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHH
T ss_pred chhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHH
Confidence 0 001122233334444567788999999999998
No 60
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.44 E-value=1.6e-11 Score=134.15 Aligned_cols=129 Identities=19% Similarity=0.172 Sum_probs=90.4
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcC------CCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhc
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRY 165 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~------dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~ 165 (736)
+..|.|+|+||+ |||+ ..+..++.++.++ ++|...++|+|+||||+|.|.+.+.+.++ ++
T Consensus 67 ~~~~~isVVIP~---yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~----------~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPA---YNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWR----------QN 132 (333)
T ss_pred CCCeEEEEEEee---CCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHH----------hc
Confidence 356899999999 9998 5788998887653 34555689999999999988753322110 00
Q ss_pred ccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccc
Q 004691 166 RIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADL 245 (736)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~ 245 (736)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (333)
T PTZ00260 133 I------------------------------------------------------------------------------- 133 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004691 246 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 324 (736)
Q Consensus 246 ~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~P 324 (736)
..-+.+..+..++ +.||++|+|.|++. ++||+|+++|||... +|+.+.+++..+.+-+ .+.++.|.+-
T Consensus 134 ~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~~~~l~~l~~~l~~~~-~~~~dvV~Gs 201 (333)
T PTZ00260 134 NPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGAT-DIDDFDKLEDIMLKIE-QNGLGIVFGS 201 (333)
T ss_pred CCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCC-CHHHHHHHHHHHHHhh-ccCCceEEee
Confidence 0001245554443 46899999999998 899999999999985 5999988888775310 1125566543
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.42 E-value=1.8e-12 Score=127.46 Aligned_cols=120 Identities=17% Similarity=0.141 Sum_probs=90.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ ..+.+|+.++.++.|+....+|+|+|||++|.|.+.+.+..
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~-------------------------- 50 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELA-------------------------- 50 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHH--------------------------
Confidence 57999 8998 78999999999999965678999999999997654222110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+ ..|.+.++..++
T Consensus 51 ------------------------~-------------------------------------------~~~~~~~~~~~~ 63 (185)
T cd04179 51 ------------------------A-------------------------------------------RVPRVRVIRLSR 63 (185)
T ss_pred ------------------------H-------------------------------------------hCCCeEEEEccC
Confidence 0 012244554444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceecc
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n 329 (736)
..||++|+|.+++. ++||+++++|+|..+ +|++|.+++..+.+++ .++|+++....+
T Consensus 64 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~~----~~~v~g~~~~~~ 120 (185)
T cd04179 64 -----NFGKGAAVRAGFKA----ARGDIVVTMDADLQH-PPEDIPKLLEKLLEGG----ADVVIGSRFVRG 120 (185)
T ss_pred -----CCCccHHHHHHHHH----hcCCEEEEEeCCCCC-CHHHHHHHHHHHhccC----CcEEEEEeecCC
Confidence 45799999999999 899999999999986 5999999999865443 566777665444
No 62
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.29 E-value=2.8e-11 Score=128.48 Aligned_cols=144 Identities=15% Similarity=-0.022 Sum_probs=89.8
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceecc
Q 004691 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n 329 (736)
++.|+..++ +.|.|+|+|.|++.+- ..++|+|+++|.|.+++ |+++.+++..+..+ +.+++.|+ |..+..
T Consensus 46 ~i~~i~~~~-----N~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~~ 115 (281)
T TIGR01556 46 KIALIHLGD-----NQGIAGAQNQGLDASF-RRGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFDR 115 (281)
T ss_pred CeEEEECCC-----CcchHHHHHHHHHHHH-HCCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEcC
Confidence 467776544 4689999999998821 02789999999999865 99999999887632 12488874 544332
Q ss_pred CCcCChHHH--HHHHhhhhH-HhHhhh-cCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccc
Q 004691 330 FNEHDIYDG--SLRSGYRLQ-WPGMDG-LKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH 405 (736)
Q Consensus 330 ~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~ 405 (736)
. ....++. ......... ...... .......++|+++||+++.
T Consensus 116 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~--------------------------------- 161 (281)
T TIGR01556 116 G-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQ--------------------------------- 161 (281)
T ss_pred C-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHH---------------------------------
Confidence 1 1111110 000000000 000001 1223456788999999982
Q ss_pred cccCCccchhhHHHhhhhhccceeeccccccccccccCC--CccchHHHHHHHHHcCcEEEEeCC
Q 004691 406 KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ--SVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~--svtED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+++ .=.||.+..+|+.++||++.++++
T Consensus 162 -------------------------------~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 162 -------------------------------RLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred -------------------------------HhCCccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 12345543 224899999999999999999986
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.26 E-value=8.4e-11 Score=115.87 Aligned_cols=51 Identities=12% Similarity=0.086 Sum_probs=42.2
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
++.++..++ +.||++|+|.|++. +.+|+|+++|+|... +|++|.+++..+.
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~-~~~~l~~l~~~~~ 106 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQD-PPELIPEMLAKWE 106 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCC-CHHHHHHHHHHHh
Confidence 456665443 46899999999999 889999999999986 5999999998753
No 64
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.23 E-value=5e-11 Score=128.78 Aligned_cols=124 Identities=19% Similarity=0.098 Sum_probs=89.1
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~ 171 (736)
..-|+|+|+||+ |||+ +.+.+++.++.++.++....+|+|+||||+|.|.+.+.+. +.+
T Consensus 28 ~~~~~vSVVIPa---yNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~--------------~~~--- 86 (306)
T PRK13915 28 KAGRTVSVVLPA---LNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAA--------------GAR--- 86 (306)
T ss_pred cCCCCEEEEEec---CCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHh--------------cch---
Confidence 356899999999 9998 7899999999987653224689999999999876432211 100
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeE
Q 004691 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
.+. ..
T Consensus 87 ----------------------------v~~-----------------------------------------------~~ 91 (306)
T PRK13915 87 ----------------------------VVS-----------------------------------------------RE 91 (306)
T ss_pred ----------------------------hhc-----------------------------------------------ch
Confidence 000 00
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEcc
Q 004691 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 323 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 323 (736)
..+.+ .+ .+.||++|+|.|+.. ++||+|+++|||....+|+++.+++..+. |++ +++|.+
T Consensus 92 ~~~~~--~~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~----~~~V~g 152 (306)
T PRK13915 92 EILPE--LP--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFDPMFVPGLLGPLLTDPG----VHLVKA 152 (306)
T ss_pred hhhhc--cc--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCCHHHHHHHHHHHHhCCC----ceEEEE
Confidence 00001 01 146899999999998 89999999999996335999999999886 666 777764
No 65
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.22 E-value=1.6e-09 Score=118.18 Aligned_cols=110 Identities=16% Similarity=0.128 Sum_probs=81.0
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHc-C-CCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004691 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMA-L-DYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~-~-dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~ 171 (736)
.++++|+||+ |||+ +.+..++.++.+ + +.+ ...+|+|+||||+|.|.+.+.+.++
T Consensus 5 ~~~vSVVIP~---yNE~-~~i~~~l~~l~~~~~~~~-~~~EIIvVDDgS~D~T~~il~~~~~------------------ 61 (325)
T PRK10714 5 IKKVSVVIPV---YNEQ-ESLPELIRRTTAACESLG-KEYEILLIDDGSSDNSAEMLVEAAQ------------------ 61 (325)
T ss_pred CCeEEEEEcc---cCch-hhHHHHHHHHHHHHHhCC-CCEEEEEEeCCCCCcHHHHHHHHHh------------------
Confidence 3679999999 9998 678887776643 1 122 2489999999999988754433210
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeE
Q 004691 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
.+ -+++
T Consensus 62 ----------------------------~~----------------------------------------------~~~v 67 (325)
T PRK10714 62 ----------------------------AP----------------------------------------------DSHI 67 (325)
T ss_pred ----------------------------hc----------------------------------------------CCcE
Confidence 00 0124
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
+.+..++ +.||++|+|+|+++ ++||+++++|||...+ |+.+.+++..+.
T Consensus 68 ~~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 68 VAILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred EEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 4443332 46999999999999 8999999999999965 999999998775
No 66
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.18 E-value=7.4e-10 Score=118.19 Aligned_cols=134 Identities=16% Similarity=0.157 Sum_probs=83.8
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHH---
Q 004691 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR--- 341 (736)
Q Consensus 265 ~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~--- 341 (736)
-++|.|.|.|++. +++|+|+++|+|++++ |+++.+++.+..+-+.+ .-+++-.|..+.+.+.+..+.....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~-~~~~~~~p~~yl~~~~~~~~~~~~~~~~ 147 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKN-PNAFLVYPCLYLSEEGSEKFYSQFKNLW 147 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcC-CCceEEEeeeeccchhhHHHhhcchhcc
Confidence 4899999999999 8999999999999875 99999999832110011 1345556666654332222211110
Q ss_pred --HhhhhHHhH-hhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHH
Q 004691 342 --SGYRLQWPG-MDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (736)
Q Consensus 342 --~f~~~~~~g-~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
.+.+....+ .+.++.....|++.+++|+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~---------------------------------------------- 181 (281)
T PF10111_consen 148 DHEFLESFISGKNSLWEFIAFASSCFLINREDFL---------------------------------------------- 181 (281)
T ss_pred hHHHHHHHhhccccccccccccceEEEEEHHHHH----------------------------------------------
Confidence 011111111 1222323345666678888773
Q ss_pred HhhhhhccceeeccccccccccccCC---CccchHHHHHHHHHcCcEEEEeCC
Q 004691 419 QETEVLASCSYEHQTKWGEEVGFSYQ---SVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~~g~~~G~~~~---svtED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.|||++. -=.||++.+.||...|.+..++++
T Consensus 182 ------------------~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 182 ------------------EIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred ------------------HhCCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 23566653 236999999999999999888765
No 67
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.15 E-value=7.6e-10 Score=102.84 Aligned_cols=113 Identities=27% Similarity=0.255 Sum_probs=81.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004691 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ +||+ ..+..|+.+++.++|+. .+++|+||++++.+.+.+.+..+
T Consensus 1 iii~~---~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPA---YNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 57999 8887 68999999999999954 78999999999865432221110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccC
Q 004691 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
. .+...++.+++
T Consensus 50 ------------------------~--------------------------------------------~~~~~~~~~~~ 61 (156)
T cd00761 50 ------------------------K--------------------------------------------DPRVIRVINEE 61 (156)
T ss_pred ------------------------c--------------------------------------------CCCeEEEEecC
Confidence 0 00123333333
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHh-hcCCCCCCceEEEccC
Q 004691 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKTSSSLAFVQFP 324 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~-f~D~~~~~~vg~VQ~P 324 (736)
+.+|++++|.+++. .++|+++++|+|.++ +|+++...+.. ..+++ .+.|+++
T Consensus 62 -----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~-~~~~~~~~~~~~~~~~~----~~~v~~~ 114 (156)
T cd00761 62 -----NQGLAAARNAGLKA----ARGEYILFLDADDLL-LPDWLERLVAELLADPE----ADAVGGP 114 (156)
T ss_pred -----CCChHHHHHHHHHH----hcCCEEEEECCCCcc-CccHHHHHHHHHhcCCC----ceEEecc
Confidence 57999999999999 789999999999986 49999887444 34444 7777654
No 68
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.10 E-value=1.6e-09 Score=127.33 Aligned_cols=169 Identities=18% Similarity=0.223 Sum_probs=110.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcC-ChHHHHHHH
Q 004691 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEH-DIYDGSLRS 342 (736)
Q Consensus 265 ~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~-d~~~~~~~~ 342 (736)
+.|-=.+|.+.... +.+=++|+++|+|+.+ +|+++.+++.-|. ||+ ||-+.+ +..|...+ -.+.+..+.
T Consensus 424 ~~~r~~~y~~~~~L--~~~v~~il~vD~dT~~-~P~ai~~lv~~f~~dp~----VggaCG--~I~~~~~~w~v~~Q~FEY 494 (862)
T KOG2571|consen 424 NQHRWVMYTAFKAL--MPSVDYILVVDADTRL-DPDALYHLVKVFDEDPQ----VGGACG--RILNKGGSWVVAYQNFEY 494 (862)
T ss_pred HHHHHHHHHHHHHh--cCcceEEEEecCCCcc-CcHHHHHHHHHhccCcc----cceecc--ccccCCCceEEeHHHHHH
Confidence 34444566666552 3556799999999996 6999999999997 776 777766 33332111 011222332
Q ss_pred hh-hhHHhHhhhcCCcccccccc--eeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCccchhhHHH
Q 004691 343 GY-RLQWPGMDGLKGPFLTGTGH--YIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQ 419 (736)
Q Consensus 343 f~-~~~~~g~d~~~~~~~~Gtg~--~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 419 (736)
.. ...++.-+..=|-+.|=.|| .||-+||.+.. .+..+|..
T Consensus 495 ~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~---------~~~~y~~~--------------------------- 538 (862)
T KOG2571|consen 495 AISHNLQKATESVFGCVSCLPGCFSLYRASALMDQF---------VEYFYGEK--------------------------- 538 (862)
T ss_pred HHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcch---------HHhhhchh---------------------------
Confidence 22 23445555555555555555 79999997521 11112110
Q ss_pred hhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHHHHhccc
Q 004691 420 ETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGL 495 (736)
Q Consensus 420 ~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 495 (736)
.-|..-|.. .+..||=.+..++..+||+.-|+.. +.+...+|+++.+++.||+||.-|.
T Consensus 539 --------------~~~~~~~~~-~~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s~ 597 (862)
T KOG2571|consen 539 --------------FSGPRHGIQ-YSLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNSI 597 (862)
T ss_pred --------------hcCcccccc-cccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhcccc
Confidence 000011333 3489999999999999999999986 6889999999999999999999993
No 69
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.07 E-value=4.2e-09 Score=113.63 Aligned_cols=121 Identities=17% Similarity=0.245 Sum_probs=89.3
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004691 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~ 173 (736)
-|.+.++|+| ||-. +.+.+++.++.+++||.+ .++++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~---yn~~-~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVT---YNRG-EDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEe---cCCH-HHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhh----------------------
Confidence 3789999999 8877 689999999999999985 34589999999765422110
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEE
Q 004691 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
..|++.+
T Consensus 54 -------------------------------------------------------------------------~~~~v~~ 60 (305)
T COG1216 54 -------------------------------------------------------------------------FFPNVRL 60 (305)
T ss_pred -------------------------------------------------------------------------cCCcEEE
Confidence 0245777
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCce
Q 004691 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQK 326 (736)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~-~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~ 326 (736)
+.-.+ +.|=||+.|.+++.+. ++++ ++++++-|+++ +|++|.+++..+.+. +..+.|+....
T Consensus 61 i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~-~~~~l~~ll~~~~~~---~~~~~~~~~i~ 123 (305)
T COG1216 61 IENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVV-EPDLLEELLKAAEED---PAAGVVGPLIR 123 (305)
T ss_pred EEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeee-ChhHHHHHHHHHHhC---CCCeEeeeeEe
Confidence 76544 4678999999998832 3444 89999999875 599999999988632 23666654443
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.83 E-value=2.8e-08 Score=95.17 Aligned_cols=47 Identities=23% Similarity=0.284 Sum_probs=43.3
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH
Q 004691 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLR 146 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~ 146 (736)
.|.++|+||| |||+ ..+.++|.|++++.|+. .+|+|+|||++|.|.+
T Consensus 2 ~~~~siiip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 4889999999 9999 89999999999999998 6799999999998764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.81 E-value=3.5e-08 Score=101.82 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=38.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~ 312 (736)
..+++.+.|.|+.. +++|+|+++|||..+. |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 46899999999998 8999999999999975 99999988887643
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.68 E-value=1.3e-07 Score=101.10 Aligned_cols=162 Identities=20% Similarity=0.251 Sum_probs=110.0
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEE-ccCceeccC
Q 004691 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV-QFPQKFHNF 330 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V-Q~Pq~f~n~ 330 (736)
+++.-++- | -+-|-.|+--|.+. ++.|+|++.|.|-.+- ||.+.++..-|+.++ +.|+| |+|-.+.-.
T Consensus 146 lf~gG~~v-g--~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~dr~ 214 (431)
T KOG2547|consen 146 LFFGGEKV-G--LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKDRQ 214 (431)
T ss_pred EEEccccc-c--cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeeccc
Confidence 44544442 2 45688899999998 8999999999999974 999999998888554 48988 566544321
Q ss_pred CcCChHHHHHHHhhhhHHhHh----hhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccc
Q 004691 331 NEHDIYDGSLRSGYRLQWPGM----DGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHK 406 (736)
Q Consensus 331 ~~~d~~~~~~~~f~~~~~~g~----d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~ 406 (736)
++-..-++ ++|...++.. +-.+-....|-.|+.|+++| |
T Consensus 215 --Gf~atle~-~~fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~l---------d------------------------- 257 (431)
T KOG2547|consen 215 --GFDATLEQ-VYFGTSHPRIYLSGNVLGFNCSTGMSSMMRKEAL---------D------------------------- 257 (431)
T ss_pred --cchhhhhh-eeeccCCceEEEccccccccccccHHHHHHHHHH---------H-------------------------
Confidence 11111111 3443322211 11122234566678888888 3
Q ss_pred ccCCccchhhHHHhhhhhccceeecccccccccccc--CCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHH
Q 004691 407 NVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFS--YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484 (736)
Q Consensus 407 ~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~--~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~ 484 (736)
+++|.. .+.+.||+..+-.+..+||++.+... ++-...+-.+...+
T Consensus 258 ------------------------------~~ggi~~f~~yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf 305 (431)
T KOG2547|consen 258 ------------------------------ECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSF 305 (431)
T ss_pred ------------------------------HhccHHHHHHHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHH
Confidence 234433 36789999999999999999999874 45556667888999
Q ss_pred HHHHHHHhc
Q 004691 485 LIQGTRWAS 493 (736)
Q Consensus 485 ~~Qr~RWa~ 493 (736)
..|-.||..
T Consensus 306 ~~Ri~rwvk 314 (431)
T KOG2547|consen 306 LDRIIRWVK 314 (431)
T ss_pred HHHHHHhhh
Confidence 999999984
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.26 E-value=4.5e-05 Score=75.08 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=45.2
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEcc
Q 004691 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (736)
++....|.+ .-|=.-|--+|+.+ +.|+|+++.|||-- .+|.++-+.+..-.+- +.++|-+
T Consensus 64 ~i~l~pR~~-----klGLgtAy~hgl~~----a~g~fiviMDaDls-HhPk~ipe~i~lq~~~----~~div~G 123 (238)
T KOG2978|consen 64 NILLKPRTK-----KLGLGTAYIHGLKH----ATGDFIVIMDADLS-HHPKFIPEFIRLQKEG----NYDIVLG 123 (238)
T ss_pred cEEEEeccC-----cccchHHHHhhhhh----ccCCeEEEEeCccC-CCchhHHHHHHHhhcc----Ccceeee
Confidence 466666765 45677789999999 99999999999986 5699988877654432 3566654
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.02 E-value=3.2e-05 Score=80.69 Aligned_cols=43 Identities=26% Similarity=0.139 Sum_probs=33.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC--CCchHHHHHHHHhhc
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMY--CNDPTSARQAMCFHL 310 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~--~~~p~~L~~~v~~f~ 310 (736)
+.||.||..-++-+ +.|+++++.|||-- +++-+.|.+.+.--.
T Consensus 142 nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 142 NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 57899999999988 89999999999963 344556777665433
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.75 E-value=0.00033 Score=76.50 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=36.6
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004691 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (736)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~ 143 (736)
+-|+|.| ||-| +.+.+|+.+++++.+-.+..+|+|++||+++.
T Consensus 2 ~PVlv~a---yNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~ 44 (334)
T cd02514 2 IPVLVIA---CNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE 44 (334)
T ss_pred cCEEEEe---cCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH
Confidence 4588999 8887 89999999999987445678999999999873
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.33 E-value=0.015 Score=63.31 Aligned_cols=49 Identities=24% Similarity=0.179 Sum_probs=41.2
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~ 142 (736)
++++|+++|+|.- +||--..+++||.|++.-.=|+---+|+++||-++.
T Consensus 151 pe~Lpt~SVviVF---HNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVF---HNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEE---ecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 6789999999999 899999999999999887644435578888887765
No 77
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.99 E-value=0.018 Score=62.98 Aligned_cols=50 Identities=22% Similarity=0.171 Sum_probs=43.6
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T 144 (736)
.++|.-+|+|+- +||....+-+||.|+++..=++=-.+|+++||+|.|.+
T Consensus 121 ~dlp~TsviITf---HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dpe 170 (559)
T KOG3738|consen 121 VDLPPTSVIITF---HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPE 170 (559)
T ss_pred cCCCCceEEEEe---ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChH
Confidence 468999999999 89999999999999999884444678999999999843
No 78
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=95.98 E-value=0.17 Score=60.87 Aligned_cols=76 Identities=22% Similarity=0.236 Sum_probs=52.7
Q ss_pred CCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccC-CCHHHHHHHHHHHhccchhhhhhhcCccccCCCCCChhHHHHHH
Q 004691 444 QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST-TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYG 522 (736)
Q Consensus 444 ~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP-~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~ 522 (736)
-+++||+..|+....||-++.+|.- ...|-.- -.+.+-..=-.+-+.|+=+.++||.--.+ ..+|.+-.-+.+.
T Consensus 408 lhLsEDIfaG~n~~lRGG~i~h~ey---~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrL--g~~ld~~R~LSfy 482 (817)
T PF02364_consen 408 LHLSEDIFAGMNATLRGGRIKHCEY---IQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRL--GTRLDFFRFLSFY 482 (817)
T ss_pred ccccHHHHHHHHHHhcCCceeehhh---hhcccccccCchhhhhhHhHhcCCccchhhhHHHHHh--hccCCHHHHHHHH
Confidence 5899999999999999999999864 2233322 23444444456889999999998763222 2677776666544
Q ss_pred hh
Q 004691 523 EM 524 (736)
Q Consensus 523 ~~ 524 (736)
.+
T Consensus 483 y~ 484 (817)
T PF02364_consen 483 YA 484 (817)
T ss_pred hc
Confidence 43
No 79
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.03 E-value=0.024 Score=65.89 Aligned_cols=113 Identities=20% Similarity=0.107 Sum_probs=82.6
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~ 171 (736)
+.+|+++|+|+- +||...++.+||.|+....=|.-.-+|+++||+++..-.
T Consensus 139 ~~Lp~~Svii~f---~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l-------------------------- 189 (578)
T KOG3736|consen 139 DKLPTTSVIIIF---HNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHL-------------------------- 189 (578)
T ss_pred cccCCCceEEEE---ecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhh--------------------------
Confidence 469999999999 899999999999999888745446789999999975210
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHH-HHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKY-EMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y-~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
++.- +.++. ++.
T Consensus 190 --------------------------~~~Ld~y~k~-----------------------------------------~~~ 202 (578)
T KOG3736|consen 190 --------------------------KDKLEEYVKR-----------------------------------------FSK 202 (578)
T ss_pred --------------------------hhhhHHHHhh-----------------------------------------hcc
Confidence 0001 11111 112
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
+.++..++ +.|+-.|.+.|-+. +.||+++++||-.-++ ..+|.-++.--.
T Consensus 203 v~i~r~~~-----R~GLIrARl~GA~~----A~geVL~FLDsHcE~n-~gWLePLL~~I~ 252 (578)
T KOG3736|consen 203 VRILRTKK-----REGLIRARLLGASM----ATGEVLTFLDSHCEVN-VGWLEPLLARIA 252 (578)
T ss_pred eeEEeecc-----hhhhHHHHhhhhhh----hhchheeeeecceeEe-cCcchHHHHHhh
Confidence 34444444 56899999999888 9999999999999886 788877776554
No 80
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=94.82 E-value=0.094 Score=46.39 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=28.4
Q ss_pred CCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH
Q 004691 107 EKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLR 146 (736)
Q Consensus 107 ynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~ 146 (736)
+||+ ..+...|..-+++.+-+ +||.|||++|.|.+
T Consensus 1 rne~-~~L~~wl~~~~~lG~d~----i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGVDH----IYIYDDGSTDGTRE 35 (97)
T ss_pred CChH-HHHHHHHHHHHHcCCCE----EEEEECCCCccHHH
Confidence 4787 58899999988887643 99999999997754
No 81
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=94.30 E-value=0.14 Score=52.85 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=39.5
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEE
Q 004691 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFV 321 (736)
Q Consensus 265 ~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~V 321 (736)
..-|.+.|.|++. ++++|++++.-|..+.+++++.+++..| .||+ +|.+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~----~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPN----IGMI 89 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TT----EEEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCC----ccEE
Confidence 4567799999999 9999999999999998899999999999 7776 7666
No 82
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=91.89 E-value=1.1 Score=48.79 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=32.2
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~y 183 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIY 183 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHH
Confidence 6789998888775422 2467999999999997 57877755444
No 83
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=91.53 E-value=1.2 Score=48.67 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=32.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHH
Confidence 6789998888775422 2567999999999997 57877765544
No 84
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=90.55 E-value=1.5 Score=48.12 Aligned_cols=43 Identities=16% Similarity=0.184 Sum_probs=28.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
++||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 5799999988875422 1567999999999995 78887755433
No 85
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=88.08 E-value=5.9 Score=41.83 Aligned_cols=80 Identities=20% Similarity=0.166 Sum_probs=42.7
Q ss_pred cCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCce-EEEccCce
Q 004691 248 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSL-AFVQFPQK 326 (736)
Q Consensus 248 ~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~v-g~VQ~Pq~ 326 (736)
+|++.|++-.. |. +-..-+-.-|+|...|-...++++|+++|+|++.. .|-..+++..-.-.+...++ ++.--|..
T Consensus 61 ~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 35678876532 22 11122445566665532235689999999999976 45444444222101111223 44446777
Q ss_pred eccC
Q 004691 327 FHNF 330 (736)
Q Consensus 327 f~n~ 330 (736)
+-|-
T Consensus 138 ~LNk 141 (346)
T COG4092 138 HLNK 141 (346)
T ss_pred ecch
Confidence 7764
No 86
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=87.80 E-value=3.1 Score=49.71 Aligned_cols=43 Identities=16% Similarity=0.144 Sum_probs=32.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~y 188 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHF 188 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHH
Confidence 6799998888875432 2667999999999997 57877755544
No 87
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=86.91 E-value=9.5 Score=40.71 Aligned_cols=54 Identities=11% Similarity=0.130 Sum_probs=38.6
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEE-EcCCCC-ccchHhHH
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYL-SDDGGS-PITLRGMR 149 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v-~DDg~~-~~T~~~l~ 149 (736)
.+-|+|=|+.|-.| +| ..+.+=...+.+++||++++++-+ +.|.+. +.|.+.|.
T Consensus 22 ~~~e~VLILtplrn--a~--~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~ 77 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AA--SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILE 77 (269)
T ss_pred ccCCeEEEEEecCC--ch--HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHH
Confidence 34588999999843 23 468899999999999999999944 444441 55554444
No 88
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=86.18 E-value=5.6 Score=45.24 Aligned_cols=48 Identities=25% Similarity=0.373 Sum_probs=29.9
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCC-CCceEEEEEcCCCCccc
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYP-VDKLHVYLSDDGGSPIT 144 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP-~~kl~v~v~DDg~~~~T 144 (736)
...|.+-|+|-+ +|-| .-+.+||.++++.. | +++..|+|+.||+.+.|
T Consensus 90 ~~~~~~pVlV~A---cNRp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~ 138 (434)
T PF03071_consen 90 NKEPVIPVLVFA---CNRP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEV 138 (434)
T ss_dssp -------EEEEE---SS-T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHH
T ss_pred cCCCcceEEEEe---cCCc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHH
Confidence 346778888888 6787 68999999999988 6 46889999999998744
No 89
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=82.69 E-value=2 Score=54.03 Aligned_cols=87 Identities=20% Similarity=0.214 Sum_probs=52.3
Q ss_pred CCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccC-CCHHHHHHHHHHHhccchhhhhhhcCccccCCCCCChhHHHHHH
Q 004691 444 QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST-TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYG 522 (736)
Q Consensus 444 ~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP-~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~ 522 (736)
-.++||+..||.-..||-++.+|.- ...|-.- -.+.+-..=-.+-+.|+=|..+||.-=.+ | .++.+-.-|.+.
T Consensus 1172 inlsEDIfAG~n~tlRgG~itH~EY---iQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrL-G-~~ldffRmLSfy 1246 (1679)
T KOG0916|consen 1172 INLSEDIFAGFNATLRGGNITHHEY---IQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRL-G-TQLDFFRMLSFY 1246 (1679)
T ss_pred cccchHhhhhhhHHhhCCCccccee---eecccccccCcchhhhhhhhhcCCCcchhhhHHHHHh-c-ccccHHHHHHHH
Confidence 4789999999999999999998862 1222111 12222233345679999999888752112 2 567766655443
Q ss_pred hhhHhhHHhHHHH
Q 004691 523 EMSLFPLLYCLPL 535 (736)
Q Consensus 523 ~~~~~~~l~~~~~ 535 (736)
..+.-.+++.+..
T Consensus 1247 ftt~GF~~n~m~i 1259 (1679)
T KOG0916|consen 1247 FTTVGFYFNNMFI 1259 (1679)
T ss_pred hccccHHHHhHHH
Confidence 3333333555543
No 90
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=81.53 E-value=38 Score=33.52 Aligned_cols=54 Identities=11% Similarity=-0.018 Sum_probs=34.7
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004691 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
.+.+.-.|+| .+|-..-.=..+..+.+-+-++.+.+||-+. |.+++|.++..-|
T Consensus 110 Q~ifclKe~N-----~kKinSHrWfFnaf~~~l~P~vcvllDvGT~-P~~~siy~Lwkaf 163 (163)
T PF01644_consen 110 QIIFCLKEKN-----AKKINSHRWFFNAFCRQLQPNVCVLLDVGTK-PGKDSIYHLWKAF 163 (163)
T ss_pred EEEEEecccc-----ccccchhhHHHHHHHhhcCCcEEEEEecCCC-cCchHHHHHHhhC
Confidence 3566667764 4554332223333333378899999999998 5699998876543
No 91
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=80.67 E-value=7.8 Score=40.13 Aligned_cols=53 Identities=11% Similarity=-0.135 Sum_probs=34.6
Q ss_pred cchHHHHHHHHHcCcEEEEeCCCCC----e------eeeccCCCHHHHHHHHHHHhccchhhh
Q 004691 447 SEDFFTGFILHCKGWTSTYLDPSRP----Q------FLGTSTTNLNDVLIQGTRWASGLIDVS 499 (736)
Q Consensus 447 tED~~t~~rl~~~Gwrs~y~~~~~~----~------~~g~aP~tl~~~~~Qr~RWa~G~~qi~ 499 (736)
.||-+.+.||..+|.+....+.... . -....|.-+.....++.||+..++..+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 5999999999999988766553211 0 012234445556677888887777544
No 92
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=55.15 E-value=29 Score=39.01 Aligned_cols=40 Identities=13% Similarity=-0.001 Sum_probs=30.9
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 267 KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
....+-+|++. .+.|++++.|||+=.-+++.+.+++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 56778888887 44599999999974446899988887664
No 93
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=55.02 E-value=98 Score=31.89 Aligned_cols=60 Identities=5% Similarity=-0.034 Sum_probs=41.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEcc
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (736)
..+....+.+++.......+.|+|++++||+=.-+++.+.+++..|.+.+.+.-+..+..
T Consensus 75 ~~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 75 FTGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 345677788888753111246899999999976678999999988875433444555543
No 94
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=54.23 E-value=1.5e+02 Score=34.59 Aligned_cols=48 Identities=17% Similarity=0.206 Sum_probs=36.5
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 004691 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~ 305 (736)
++.++..... .-.++.+|+.|++.. .+.+++.++|.|+..+ +++|.+.
T Consensus 315 ~i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 315 RIKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred ceEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHH
Confidence 3566665411 467999999999863 4567999999999976 9999773
No 95
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=49.24 E-value=22 Score=38.96 Aligned_cols=46 Identities=26% Similarity=0.286 Sum_probs=31.1
Q ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEE
Q 004691 271 LNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 321 (736)
Q Consensus 271 LN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 321 (736)
-|.|+.. +..++++++|+|+++ .++.-..+..+........+.++|
T Consensus 119 RNvAr~~----a~T~~v~~~DvD~~p-s~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 119 RNVARSG----ARTDYVFLLDVDFLP-SPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHHh----cCcceEEEecceeee-CcchHHHHHHHhhhhccCCceEEE
Confidence 4677777 889999999999974 467655555544322234457777
No 96
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=45.73 E-value=84 Score=33.16 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=23.0
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004691 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (736)
Q Consensus 282 t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 313 (736)
.+.+.++.+|-|++++ ++-|++.+.-| ||.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~-~~~ 114 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY-DPS 114 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS--TT
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC-CCc
Confidence 5679999999999985 89998888766 443
No 97
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=38.97 E-value=24 Score=30.35 Aligned_cols=22 Identities=18% Similarity=-0.136 Sum_probs=15.6
Q ss_pred cchHHHHHHHHHcCcEEEEeCC
Q 004691 447 SEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 447 tED~~t~~rl~~~Gwrs~y~~~ 468 (736)
-||.+...|+..+|.+....+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 3999999999999998776554
No 98
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=33.55 E-value=4.2e+02 Score=27.72 Aligned_cols=42 Identities=10% Similarity=-0.012 Sum_probs=27.9
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEe--CCCCCCCchHHHHHHHHhhc
Q 004691 267 KGGALNVLLRVSGVISNSPYILGL--DCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 267 KAGaLN~al~~~~~~t~g~~Il~l--DAD~~~~~p~~L~~~v~~f~ 310 (736)
...++..+++.... ..+++++.+ |.|.-+. .|+++++-.+..
T Consensus 97 ~~~~~~~~~~~~~~-~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 97 HRDAMRRAINAARR-DGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred HHHHHHHHHhhhcc-CCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 55677777743211 345666555 9987764 999988877774
No 99
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=32.85 E-value=1.6e+02 Score=34.17 Aligned_cols=84 Identities=18% Similarity=0.331 Sum_probs=52.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhcC---Cc---------hHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChh
Q 004691 648 SSVFLVPMVSLMILNVAALVCGVIRMIAVG---NW---------DKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPS 715 (736)
Q Consensus 648 ~~~~~~P~~~l~~l~l~al~~g~~r~~~~~---~~---------~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~~ 715 (736)
.+..+.+.+. .+|.+++++--+..++... .| +++ ++....=+++|+.=.-|++.|+.+..+|..
T Consensus 88 c~r~l~~~~~-~~L~l~aflSPiaflvLP~il~~~~~~~C~~~CeGl---lislafKLliLlig~WAlf~R~~~a~lPRi 163 (505)
T PF06638_consen 88 CSRYLGLILA-SILGLLAFLSPIAFLVLPKILWRWQLEPCGAECEGL---LISLAFKLLILLIGTWALFFRRPRADLPRI 163 (505)
T ss_pred cceeHHHHHH-HHHHHHHHHhhHHHHHhcccccCccccccCCcccce---eHHHHHHHHHHHHHHHHHhcCcccCCCchh
Confidence 4454444443 4556666666555544311 11 222 233333344444445677889999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcc
Q 004691 716 AILLSSVFFVTFLFFGSIIL 735 (736)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~ 735 (736)
-+..+.+++++|.+..++-|
T Consensus 164 f~fRa~ll~Lvfl~~~syWL 183 (505)
T PF06638_consen 164 FVFRALLLVLVFLFLFSYWL 183 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988776643
No 100
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=28.88 E-value=1.9e+02 Score=27.97 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=34.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
..|-.+.+..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 45778999999998 5689999999999434689998888766
No 101
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=27.17 E-value=2.1e+02 Score=28.66 Aligned_cols=42 Identities=14% Similarity=-0.018 Sum_probs=34.0
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 265 ~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
.|-.+++-.|++. .+.+.+++++||+=.-+++.+++++..+.
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4667788888887 56799999999996657899988887664
No 102
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=26.28 E-value=2.3e+02 Score=28.44 Aligned_cols=46 Identities=17% Similarity=0.078 Sum_probs=34.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
..+.++++-+++.... .+.+.+++++||+-.-+++.+.+++..+.+
T Consensus 72 ~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 72 QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 3578999999998732 126889999999932247888888877754
No 103
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=26.07 E-value=1.7e+02 Score=28.36 Aligned_cols=43 Identities=14% Similarity=-0.044 Sum_probs=32.6
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 265 ~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
.+-++++..|++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 4667888888872 156789999999994335899999887665
No 104
>PLN03153 hypothetical protein; Provisional
Probab=25.33 E-value=3.3e+02 Score=31.95 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=24.3
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004691 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (736)
Q Consensus 282 t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 313 (736)
.+.+.++++|.|++++ ++-|.+.+.-+ |++
T Consensus 209 pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dpt 238 (537)
T PLN03153 209 PDVRWFVLGDDDTIFN-ADNLVAVLSKY-DPS 238 (537)
T ss_pred CCCCEEEEecCCcccc-HHHHHHHHhhc-CCC
Confidence 6889999999999986 78887777655 554
No 105
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=25.16 E-value=1.8e+02 Score=30.67 Aligned_cols=42 Identities=10% Similarity=-0.063 Sum_probs=28.8
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 267 KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
..+.+-+|++... .+.++|++.|+|+=.-.++.+.+++....
T Consensus 103 r~~SV~~gl~~l~--~~~~~VlihDaarP~vs~~~i~~li~~~~ 144 (252)
T PLN02728 103 RQDSVFNGLQEVD--ANSELVCIHDSARPLVTSADIEKVLKDAA 144 (252)
T ss_pred hHHHHHHHHHhcc--CCCCEEEEecCcCCCCCHHHHHHHHHHHh
Confidence 3566777777632 35689999999764445888888776443
No 106
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=24.06 E-value=2.1e+02 Score=31.46 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=25.9
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHH
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L 302 (736)
.+.+..=-|..+.. ..+.++++=+||||+- +++-|
T Consensus 159 ~n~l~~YYNy~ls~---ipk~~w~iKID~DhIy-~~~KL 193 (347)
T PF06306_consen 159 ENSLYNYYNYVLSF---IPKNEWAIKIDADHIY-DTKKL 193 (347)
T ss_pred hhhhhhhhhhhhcc---cccceEEEEeccceee-cHHHH
Confidence 34566677777765 2578999999999985 57665
No 107
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=23.72 E-value=1.6e+02 Score=29.04 Aligned_cols=42 Identities=12% Similarity=0.040 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 265 ~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
.+-.+++..+++. .+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 74 PGPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 4567788889987 67899999999994446899999888664
No 108
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=22.88 E-value=2.5e+02 Score=26.98 Aligned_cols=45 Identities=13% Similarity=-0.025 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
..+-+.++..|++... .+.|.+++++||+-.-+++.+++++..+.
T Consensus 73 ~~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 117 (186)
T cd04182 73 EEGMSSSLAAGLEALP--ADADAVLILLADQPLVTAETLRALIDAFR 117 (186)
T ss_pred hhCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 3578889999998732 13789999999993234888988887765
No 109
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=22.71 E-value=1.7e+02 Score=32.70 Aligned_cols=50 Identities=18% Similarity=0.200 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHHHHhhhhcc
Q 004691 684 AQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL 735 (736)
Q Consensus 684 ~~~~~~~~~l~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
+-++.+.+...++| +++-+..|-+.|+ -..-+-.|.+=+++|.++.+..|
T Consensus 196 ~LV~~~~fayWLFY-iVri~~~r~~nYk-~iV~yatslvDaLLfiHYlaVVL 245 (531)
T KOG3814|consen 196 VLVFLIVFAYWLFY-IVRILDERYRNYK-GIVQYATSLVDALLFIHYLAVVL 245 (531)
T ss_pred HHHHHHHHHHHHHH-hhhhhcccchhhH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444433333 3455665655554 22223345677888888776544
No 110
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=20.90 E-value=2.8e+02 Score=26.12 Aligned_cols=55 Identities=18% Similarity=0.114 Sum_probs=41.4
Q ss_pred CCChHHHHHHHHHhcCCCC-CCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004691 264 HHFKGGALNVLLRVSGVIS-NSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 324 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t-~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~P 324 (736)
..+=+.++-.|++. . +.+.++++-||+..-+++.+++++..+.+ .+..++++..+
T Consensus 69 ~~G~~~sl~~a~~~----~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~--~~~~i~~~~~~ 124 (160)
T PF12804_consen 69 GQGPLASLLAALSQ----LPSSEPVLVLPCDQPFLSPELLRRLLEALEK--SPADIVVPVFR 124 (160)
T ss_dssp SCSHHHHHHHHHHT----STTSSEEEEEETTETTS-HHHHHHHHHHHHH--TTTSEEEEEET
T ss_pred cCChHHHHHHHHHh----cccCCCcEEEeCCccccCHHHHHHHHHHHhc--cCCcEEEEEEC
Confidence 46888999999987 4 88999999999954359999999988762 12347766543
Done!