Query 004691
Match_columns 736
No_of_seqs 332 out of 1984
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 02:45:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004691.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004691hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 5.5E-56 1.9E-60 532.2 53.2 509 19-713 65-583 (802)
2 2z86_A Chondroitin synthase; G 99.8 2.7E-18 9.1E-23 200.0 19.2 125 93-329 91-216 (625)
3 1xhb_A Polypeptide N-acetylgal 99.8 4.8E-18 1.6E-22 191.4 18.5 238 91-506 25-300 (472)
4 3bcv_A Putative glycosyltransf 99.8 2.6E-18 8.9E-23 174.4 13.9 109 93-311 3-111 (240)
5 1qg8_A Protein (spore coat pol 99.7 1.5E-18 5E-23 178.1 7.8 217 95-493 1-234 (255)
6 2d7i_A Polypeptide N-acetylgal 99.7 1.7E-17 5.6E-22 191.9 12.9 239 92-506 109-378 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.7 1E-16 3.5E-21 182.1 15.3 113 91-312 62-174 (501)
8 2z86_A Chondroitin synthase; G 99.7 1.5E-16 5.2E-21 185.2 13.1 221 93-499 373-598 (625)
9 3ckj_A Putative uncharacterize 99.6 1.8E-15 6.3E-20 162.8 13.5 123 93-325 46-170 (329)
10 3l7i_A Teichoic acid biosynthe 99.5 2.8E-15 9.6E-20 178.0 0.0 110 95-312 2-111 (729)
11 4fix_A UDP-galactofuranosyl tr 99.5 1.5E-13 5.3E-18 161.0 13.2 123 93-322 178-303 (657)
12 3f1y_A Mannosyl-3-phosphoglyce 99.4 1.6E-12 5.4E-17 143.2 14.8 120 94-323 93-216 (387)
13 2fy7_A Beta-1,4-galactosyltran 99.4 8.7E-13 3E-17 139.6 9.9 63 438-500 189-264 (287)
14 2nxv_A ATP synthase subunits r 99.1 2.5E-10 8.7E-15 117.7 12.8 46 267-321 62-112 (249)
15 2bo4_A Mannosylglycerate synth 98.8 1.4E-07 4.9E-12 103.9 17.9 42 264-310 73-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 98.1 7.6E-06 2.6E-10 89.4 10.9 38 264-307 142-182 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 98.0 1.4E-05 4.8E-10 85.5 10.0 44 93-145 51-94 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 97.7 0.00011 3.7E-09 79.4 9.9 46 94-144 1-46 (343)
19 3lw6_A FI08434P, beta-4-galact 70.0 23 0.0008 36.6 10.5 53 447-499 185-250 (287)
20 3q80_A 2-C-methyl-D-erythritol 47.5 38 0.0013 33.6 7.3 45 267-311 83-127 (231)
21 3d5n_A Q97W15_sulso; NESG, SSR 27.7 1.2E+02 0.0042 28.6 7.2 42 265-309 71-112 (197)
22 2j0a_A Beta-1,3-N-acetylglucos 25.8 83 0.0029 32.1 5.8 37 282-320 92-128 (280)
23 3f1c_A Putative 2-C-methyl-D-e 25.7 56 0.0019 32.3 4.4 46 266-311 84-132 (246)
24 2y6p_A 3-deoxy-manno-octuloson 22.4 95 0.0033 29.9 5.3 42 264-311 71-113 (234)
25 2xwl_A 2-C-methyl-D-erythritol 21.7 1.6E+02 0.0055 27.9 6.8 41 266-309 78-118 (223)
26 1e5k_A Molybdopterin-guanine d 20.5 1.1E+02 0.0037 29.1 5.2 39 265-308 77-116 (201)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=5.5e-56 Score=532.19 Aligned_cols=509 Identities=20% Similarity=0.293 Sum_probs=388.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCCCCCCCce
Q 004691 19 LNKLHAFLHCIAIALLIYYRASYLLQET-RAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI 97 (736)
Q Consensus 19 ~~r~~~~~~~~~~~~~l~wR~~~~~~~~-~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V 97 (736)
+..+++++.+++.+.|++||++.+++.. ...+.++|++++++|+++.+.+++..+..++|..|...++. .+++.|+|
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~V 142 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPTV 142 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCCE
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCcE
Confidence 3444555555556789999999999864 34567888899999999999999999999999988755443 24678999
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004691 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+++++++|+.|+++++||.++++|+|+|||++|.|.+.
T Consensus 143 SViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------ 189 (802)
T 4hg6_A 143 DILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------ 189 (802)
T ss_dssp EEEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------------
T ss_pred EEEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc------------------------------
Confidence 999999 99998888999999999999999999999999999977531
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEecc
Q 004691 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
.+++.+++..+..+..+++..+ .++.|+.|+
T Consensus 190 --------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~~ 220 (802)
T 4hg6_A 190 --------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTRE 220 (802)
T ss_dssp --------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEECS
T ss_pred --------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEec
Confidence 1122222211111111111110 036788887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcC---
Q 004691 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEH--- 333 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~--- 333 (736)
++ +++|+||+|.|++. ++||||+++|||++++ ||+|++++.+|. ||+ +++||+++.+.|.+..
T Consensus 221 ~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~~~~~~~ 287 (802)
T 4hg6_A 221 RN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINPDPIQRN 287 (802)
T ss_dssp SC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSCCHHHHH
T ss_pred CC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCCchHhhh
Confidence 64 68999999999999 8999999999999975 999999999994 776 9999999999875310
Q ss_pred ----ChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccC
Q 004691 334 ----DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (736)
Q Consensus 334 ----d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 409 (736)
+.+.++.+.++...+.+.+.+++++++|+++++||+++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~------------------------------------- 330 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD------------------------------------- 330 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH-------------------------------------
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH-------------------------------------
Confidence 112234467788899999999999999999999999992
Q ss_pred CccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHH
Q 004691 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 489 (736)
+.+||++++++||.+++++++++||++.|+++ +.+++.+|+|++++++||.
T Consensus 331 ---------------------------~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~ 381 (802)
T 4hg6_A 331 ---------------------------EAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRG 381 (802)
T ss_dssp ---------------------------HHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHH
T ss_pred ---------------------------HcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHH
Confidence 24689999999999999999999999999986 7899999999999999999
Q ss_pred HHhccchhhhhhhcCccccCCCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHH
Q 004691 490 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFL 569 (736)
Q Consensus 490 RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i 569 (736)
||++|.+|+++ +++|++. +++++.||++|+....++ +.+++.++++++|++++++|++++......++.++++.++
T Consensus 382 RW~~G~~q~l~-~~~pl~~--~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l 457 (802)
T 4hg6_A 382 RWATGMMQMLL-LKNPLFR--RGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLA 457 (802)
T ss_dssp HHHHHHHHHHH-HSCTTSC--SSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHH
T ss_pred HHHccHHHHHH-HhCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHH
Confidence 99999999998 4678774 789999999999988888 8889999999999999999998876544444333333222
Q ss_pred HHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccc
Q 004691 570 SAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSS 649 (736)
Q Consensus 570 ~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~ 649 (736)
...+ +... ..+.....||++.. .+...++.+..++..++++++.+|+||+|+.+.++ .. .+
T Consensus 458 ~~~~--~~~~-~~~~~r~~~~~~l~-----~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~~-----~~ 518 (802)
T 4hg6_A 458 VSFL--VQNA-LFARQRWPLVSEVY-----EVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE------NY-----IS 518 (802)
T ss_dssp HHHH--HHHH-HHTTTSCTTHHHHH-----HHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------CC-----BC
T ss_pred HHHH--HHHH-HhcCcHHHHHHHHH-----HHHHHHHHHHHHHHHHhCCCCCcceECCCCccccc------cc-----hh
Confidence 2111 1112 23444445665532 23345556666777888999999999999986543 11 13
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 004691 650 VFLVPMVSLMILNVAALVCGVIRMIAVG-NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 713 (736)
Q Consensus 650 ~~~~P~~~l~~l~l~al~~g~~r~~~~~-~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p 713 (736)
.+++|++++++++++++++|++++.... ......++++|++++++.+.+.+...+-|+..++-|
T Consensus 519 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~ 583 (802)
T 4hg6_A 519 PIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP 583 (802)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 5788999999999999999999987543 234456677788777777776666555454444433
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.78 E-value=2.7e-18 Score=200.00 Aligned_cols=125 Identities=19% Similarity=0.167 Sum_probs=98.4
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004691 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+|+.++++++||. .++|+|+|||++|.|.+.+.+..
T Consensus 91 ~~p~vsviIp~---~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~-------------------- 145 (625)
T 2z86_A 91 IIDGLSIVIPT---YNRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFE-------------------- 145 (625)
T ss_dssp CCCCEEEEEEE---SSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTT--------------------
T ss_pred cCCcEEEEEec---CCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhh--------------------
Confidence 35899999999 9997 79999999999999986 69999999999997643211000
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEE
Q 004691 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
.-+.+.
T Consensus 146 --------------------------------------------------------------------------~~~~i~ 151 (625)
T 2z86_A 146 --------------------------------------------------------------------------SLLNIK 151 (625)
T ss_dssp --------------------------------------------------------------------------TTSCEE
T ss_pred --------------------------------------------------------------------------hcCCeE
Confidence 002467
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceecc
Q 004691 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (736)
|+.++++ .++|++|+|.|++. ++||+|+++|+|+++ +|++|.+++..|. +|+ ++.|+..+.+.+
T Consensus 152 ~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~-~~~~l~~~~~~~~~~~~----~~~~g~~~~~~~ 216 (625)
T 2z86_A 152 YVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAP-NPLWVQSYMELLAVDDN----VALIGPRKYIDT 216 (625)
T ss_dssp EEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEE-CTTHHHHHHHHHHHCTT----EEEECCEEEECC
T ss_pred EEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCCC-CHHHHHHHHHHHhcCCc----eEEEEeeeeccC
Confidence 7766432 45899999999999 899999999999997 4999999999986 454 888876555443
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.77 E-value=4.8e-18 Score=191.36 Aligned_cols=238 Identities=16% Similarity=0.090 Sum_probs=155.4
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc-chHhHHHHHHhhhhhhhhhhhccccc
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI-TLRGMREAFRFAKWWIPFCRRYRIKT 169 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~-T~~~l~Ea~~~a~~w~pfc~~~~v~~ 169 (736)
++.+|.|+|+||+ |||+.+.+.+||.|+++++||...++|+|+|||++|. |.+.+.+.+
T Consensus 25 ~~~~p~vSVIIp~---yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~----------------- 84 (472)
T 1xhb_A 25 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYV----------------- 84 (472)
T ss_dssp CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHH-----------------
T ss_pred CcCCCCeEEEEEe---CCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHH-----------------
Confidence 3568999999999 9998679999999999999998778999999999984 543222111
Q ss_pred CCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcC
Q 004691 170 ICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p 249 (736)
...|
T Consensus 85 ----------------------------------------------------------------------------~~~~ 88 (472)
T 1xhb_A 85 ----------------------------------------------------------------------------KKLK 88 (472)
T ss_dssp ----------------------------------------------------------------------------HSSS
T ss_pred ----------------------------------------------------------------------------HHCC
Confidence 0123
Q ss_pred -eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCcee
Q 004691 250 -LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKF 327 (736)
Q Consensus 250 -~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f 327 (736)
++.++..++ +.|+++|+|.|++. ++||+|+++|+|..++ |++|.+++..+. +++ ++.+. ....
T Consensus 89 ~~v~vi~~~~-----n~G~~~a~N~g~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~~~----~~v~~-~~~~ 153 (472)
T 1xhb_A 89 VPVHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDRR----TVVCP-IIDV 153 (472)
T ss_dssp SCEEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCTT----EEEEE-EEEE
T ss_pred CcEEEEECCC-----CCChHHHHHHHHHh----ccCCeEEEECCCeEeC-ccHHHHHHHHHHhCCC----EEEEe-eeee
Confidence 477776655 36799999999999 8999999999999865 999999999886 443 44331 1111
Q ss_pred ccCCcC------ChHHHH--HHHhhhh------HHhHh--h---hcCCcccccccceeehhhccCCccccccchHhhHhh
Q 004691 328 HNFNEH------DIYDGS--LRSGYRL------QWPGM--D---GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDT 388 (736)
Q Consensus 328 ~n~~~~------d~~~~~--~~~f~~~------~~~g~--d---~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~ 388 (736)
.+.+.. ...... ....+.. ....+ + ....+...|+..++||+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~---------------- 217 (472)
T 1xhb_A 154 ISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQ---------------- 217 (472)
T ss_dssp ECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHH----------------
T ss_pred EcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHH----------------
Confidence 111000 000000 0000000 00000 0 12233455666678888872
Q ss_pred hcCchhHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCc---cchHHHHHHHHHcCcEEEE
Q 004691 389 FGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV---SEDFFTGFILHCKGWTSTY 465 (736)
Q Consensus 389 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sv---tED~~t~~rl~~~Gwrs~y 465 (736)
+.+||+++.. .||+++++|+...|+++.|
T Consensus 218 ------------------------------------------------~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~ 249 (472)
T 1xhb_A 218 ------------------------------------------------EIGTYDAGMDIWGGENLEISFRIWQCGGTLEI 249 (472)
T ss_dssp ------------------------------------------------HTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEE
T ss_pred ------------------------------------------------HcCCCCCcccccCchhHHHHHHHHhcCCeEEE
Confidence 2356876654 7999999999999999999
Q ss_pred eCCCCCeee----eccCC----C-----HHHHHHHHHHHhccchhhhhhhcCcc
Q 004691 466 LDPSRPQFL----GTSTT----N-----LNDVLIQGTRWASGLIDVSISRFCPL 506 (736)
Q Consensus 466 ~~~~~~~~~----g~aP~----t-----l~~~~~Qr~RWa~G~~qi~~~~~~pl 506 (736)
++.. .+. ...|. . .....+...||..+..+.++. .+|.
T Consensus 250 ~p~~--~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~-~~p~ 300 (472)
T 1xhb_A 250 VTCS--HVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYI-ISPG 300 (472)
T ss_dssp EEEE--EEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHH-TSTT
T ss_pred ccCc--EEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh-hCcc
Confidence 9752 221 11222 1 456677778999999888874 4563
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.76 E-value=2.6e-18 Score=174.42 Aligned_cols=109 Identities=17% Similarity=0.132 Sum_probs=89.1
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004691 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||+ ||++ +.+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+.++
T Consensus 3 ~~p~vsViIp~---yn~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~------------------- 57 (240)
T 3bcv_A 3 LIPKVSVIVPI---YNVE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAA------------------- 57 (240)
T ss_dssp CCCSEEEEEEE---SSCT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHH-------------------
T ss_pred CCCcEEEEEec---CCCH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHh-------------------
Confidence 35899999999 8998 78999999999999984 89999999999977543221110
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEE
Q 004691 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
..|++.
T Consensus 58 --------------------------------------------------------------------------~~~~i~ 63 (240)
T 3bcv_A 58 --------------------------------------------------------------------------QYPNIK 63 (240)
T ss_dssp --------------------------------------------------------------------------HCSSEE
T ss_pred --------------------------------------------------------------------------hCCCEE
Confidence 013467
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004691 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
++.. + +.|+++|+|.|++. ++||||+++|+|.++ +|++|.+++..+.+
T Consensus 64 ~i~~-~-----n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~-~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 64 VIHK-K-----NAGLGMACNSGLDV----ATGEYVAFCDSDDYV-DSDMYMTMYNVAQK 111 (240)
T ss_dssp EEEC-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCCC-CTTHHHHHHHHHHH
T ss_pred EEEC-C-----CCChHHHHHHHHHH----cCCCEEEEECCCCcC-CHHHHHHHHHHHHh
Confidence 7742 2 46899999999999 899999999999987 49999999998875
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.74 E-value=1.5e-18 Score=178.10 Aligned_cols=217 Identities=14% Similarity=0.061 Sum_probs=138.5
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (736)
|.|+|+||| ||++ +.+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+.+
T Consensus 1 p~vSViIp~---yn~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~---------------------- 52 (255)
T 1qg8_A 1 PKVSVIMTS---YNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFL---------------------- 52 (255)
T ss_dssp CCEEEEEEE---SSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGG----------------------
T ss_pred CeEEEEEEc---CCCH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHh----------------------
Confidence 789999999 8998 79999999999999994 8999999999997653221100
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEE
Q 004691 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
..|++.|+
T Consensus 53 ------------------------------------------------------------------------~~~~i~~i 60 (255)
T 1qg8_A 53 ------------------------------------------------------------------------NDNRVRFY 60 (255)
T ss_dssp ------------------------------------------------------------------------GSTTEEEE
T ss_pred ------------------------------------------------------------------------hcCCEEEE
Confidence 01246777
Q ss_pred eccCCCC----CCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceec-
Q 004691 255 SREKSPE----HLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFH- 328 (736)
Q Consensus 255 ~R~k~p~----~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~- 328 (736)
..+.. + ..+.|+++|+|.|++. ++||||+++|+|.++. |++|.+++..+. +|+ +++|.+.....
T Consensus 61 ~~~~~-~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~ 130 (255)
T 1qg8_A 61 QSDIS-GVKERTEKTRYAALINQAIEM----AEGEYITYATDDNIYM-PDRLLKMVRELDTHPE----KAVIYSASKTYH 130 (255)
T ss_dssp ECCCC-SHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTEEEC-TTHHHHHHHHHHHCTT----CCEEEEEEEEEE
T ss_pred ecccc-cccccccccCHHHHHHHHHHH----cCCCEEEEeCCCCccC-hHHHHHHHHHHHhCCC----ceEEEeceEEEE
Confidence 66510 0 0146899999999999 8999999999999975 999999999886 445 77787665544
Q ss_pred -cCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccc
Q 004691 329 -NFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKN 407 (736)
Q Consensus 329 -n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~ 407 (736)
+.+.. .... ++... ............|++.++||+++. +
T Consensus 131 ~~~~~~-~~~~----~~~~~-~~~~~~~~~~~~~~~~~~rr~~~~-----------~----------------------- 170 (255)
T 1qg8_A 131 LNENRD-IVKE----TVRPA-AQVTWNAPCAIDHCSVMHRYSVLE-----------K----------------------- 170 (255)
T ss_dssp EC---C-EEEE----EEECC-CSCBSCCTTTSCGGGEEEETHHHH-----------H-----------------------
T ss_pred eCCCCc-chhh----ccCch-HHHHHhhcCCCccceEEEEHHHHH-----------h-----------------------
Confidence 32111 1000 00000 000112233456888899999982 1
Q ss_pred cCCccchhhHHHhhhhhccceeeccccccccc-cc------c-CCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCC
Q 004691 408 VNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GF------S-YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 479 (736)
Q Consensus 408 ~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~-G~------~-~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~ 479 (736)
.+ || + .....||.+..+++..+| ++.|+++. ...+-..+.
T Consensus 171 ------------------------------~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~-~~~~r~~~~ 218 (255)
T 1qg8_A 171 ------------------------------VKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEE-LDLNYITDQ 218 (255)
T ss_dssp ------------------------------HHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEE-EEEEEEC--
T ss_pred ------------------------------hcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCc-EEEEEEcCC
Confidence 12 34 2 234679999999999987 68888762 344555666
Q ss_pred CHHHHH--HHHHHHhc
Q 004691 480 NLNDVL--IQGTRWAS 493 (736)
Q Consensus 480 tl~~~~--~Qr~RWa~ 493 (736)
+.+... +||.+|.+
T Consensus 219 s~s~~~~~~~~~~~~~ 234 (255)
T 1qg8_A 219 SIHFQLFELEKNEFVR 234 (255)
T ss_dssp ------------CTGG
T ss_pred ccchhHHHHHHHHHHH
Confidence 666655 34444443
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.71 E-value=1.7e-17 Score=191.92 Aligned_cols=239 Identities=14% Similarity=0.072 Sum_probs=155.5
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc-hHhHHHHHHhhhhhhhhhhhcccccC
Q 004691 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT-LRGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T-~~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
+..|.|+|+||+ |||+.+.+.+||.|+++++||...++|+|+||||+|.| .+.+.+.+
T Consensus 109 ~~~P~vSVIIp~---yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~------------------ 167 (570)
T 2d7i_A 109 ETLPNTSIIIPF---HNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM------------------ 167 (570)
T ss_dssp SSCCCEEEEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH------------------
T ss_pred CCCCCeEEEEEE---CCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH------------------
Confidence 568999999999 99986799999999999999976679999999999977 32211110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
...|+
T Consensus 168 ---------------------------------------------------------------------------~~~~~ 172 (570)
T 2d7i_A 168 ---------------------------------------------------------------------------ALFPS 172 (570)
T ss_dssp ---------------------------------------------------------------------------TTSTT
T ss_pred ---------------------------------------------------------------------------HhCCe
Confidence 01245
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccC
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNF 330 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~ 330 (736)
+.++..++ +.|+++|+|.|++. ++||+|+++|+|..+ +|++|.+++..+.+.. .+ .|.....+.+.
T Consensus 173 v~vi~~~~-----n~G~~~A~N~G~~~----A~gd~i~fLD~D~~~-~p~~L~~ll~~l~~~~---~~-vv~~~i~~~~~ 238 (570)
T 2d7i_A 173 VRILRTKK-----REGLIRTRMLGASV----ATGDVITFLDSHCEA-NVNWLPPLLDRIARNR---KT-IVCPMIDVIDH 238 (570)
T ss_dssp EEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEECCSSEEE-CTTCSHHHHHHHHHCT---TE-EEEEEEEEECT
T ss_pred EEEEECCC-----CCCHHHHHHHHHHh----cCCCEEEEEcCCccc-cccHHHHHHHHHHhCC---CE-EEeeeeeccCC
Confidence 77776654 46899999999999 899999999999997 5999999999886432 13 33221222211
Q ss_pred Cc-------CChHHH--HHHHhhhhHHhH--------hhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCch
Q 004691 331 NE-------HDIYDG--SLRSGYRLQWPG--------MDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESN 393 (736)
Q Consensus 331 ~~-------~d~~~~--~~~~f~~~~~~g--------~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~ 393 (736)
+. ...... ....++...... ......+...|.+.++||+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~--------------------- 297 (570)
T 2d7i_A 239 DDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFW--------------------- 297 (570)
T ss_dssp TTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHH---------------------
T ss_pred CchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHH---------------------
Confidence 00 000000 000001000000 0011233455777778888772
Q ss_pred hHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCc---cchHHHHHHHHHcCcEEEEeCCCC
Q 004691 394 LFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV---SEDFFTGFILHCKGWTSTYLDPSR 470 (736)
Q Consensus 394 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sv---tED~~t~~rl~~~Gwrs~y~~~~~ 470 (736)
+.+||+.+.. .||+++++|+..+||+++|++...
T Consensus 298 -------------------------------------------~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~ 334 (570)
T 2d7i_A 298 -------------------------------------------ELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSR 334 (570)
T ss_dssp -------------------------------------------HTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -------------------------------------------hcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeE
Confidence 2356876543 699999999999999999987521
Q ss_pred Ceee---eccCCC-------HHHHHHHHHHHhccchhhhhhhcCcc
Q 004691 471 PQFL---GTSTTN-------LNDVLIQGTRWASGLIDVSISRFCPL 506 (736)
Q Consensus 471 ~~~~---g~aP~t-------l~~~~~Qr~RWa~G~~qi~~~~~~pl 506 (736)
... +..|.+ .....+-..||.....+.+.. .+|-
T Consensus 335 -v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~-~~p~ 378 (570)
T 2d7i_A 335 -VGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQ-RRPE 378 (570)
T ss_dssp -EEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHT-TCGG
T ss_pred -EEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh-cCcc
Confidence 111 122311 456667778999998888764 3463
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.69 E-value=1e-16 Score=182.13 Aligned_cols=113 Identities=15% Similarity=0.071 Sum_probs=93.1
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004691 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
++.+|.|+|+||+ |||+...+.+||.|++++.||...++|+|+||||+|.|...+.
T Consensus 62 ~~~~p~vSVIIp~---yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~--------------------- 117 (501)
T 2ffu_A 62 RVDLPATSVVITF---HNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL--------------------- 117 (501)
T ss_dssp CSSCCCEEEEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG---------------------
T ss_pred CcCCCCEEEEEEe---CcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH---------------------
Confidence 4568999999999 9998448999999999999997667999999999997642110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
...|+
T Consensus 118 ---------------------------------------------------------------------------~~~~~ 122 (501)
T 2ffu_A 118 ---------------------------------------------------------------------------GKIEK 122 (501)
T ss_dssp ---------------------------------------------------------------------------GGBTT
T ss_pred ---------------------------------------------------------------------------hcCCC
Confidence 01235
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~ 312 (736)
+.++..++ +.|+++|+|.|++. ++||+|+++|+|..++ |++|.+++..+.+.
T Consensus 123 v~vi~~~~-----n~G~~~A~N~G~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 123 VRVLRNDR-----REGLMRSRVRGADA----AQAKVLTFLDSHCECN-EHWLEPLLERVAED 174 (501)
T ss_dssp EEEEECSS-----CCHHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCHHHHHHHHHHC
T ss_pred EEEEECCC-----CcCHHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhC
Confidence 77776655 46899999999999 8999999999999975 99999999988643
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.67 E-value=1.5e-16 Score=185.20 Aligned_cols=221 Identities=19% Similarity=0.225 Sum_probs=153.0
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004691 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+||.|+++++||. ++|+|+|||++|.|.+.+.+..
T Consensus 373 ~~~~vsiii~~---yn~~-~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~-------------------- 426 (625)
T 2z86_A 373 RVPLVSIYIPA---YNCS-KYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHY-------------------- 426 (625)
T ss_dssp SSCSEEEEEEE---SSCT-TTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHH--------------------
T ss_pred cCCeEEEEEeC---CCCH-HHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHH--------------------
Confidence 46899999999 8997 78999999999999985 8999999999998764332211
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEE
Q 004691 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
...|++.
T Consensus 427 -------------------------------------------------------------------------~~~~~i~ 433 (625)
T 2z86_A 427 -------------------------------------------------------------------------ANHPRVR 433 (625)
T ss_dssp -------------------------------------------------------------------------TTCTTEE
T ss_pred -------------------------------------------------------------------------hhCCcEE
Confidence 0113466
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCC
Q 004691 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~ 331 (736)
++. ++ +.|+++|+|.|++. ++||||+++|+|.++ +|++|.+++..|. +|+ +++|.+...+.+.+
T Consensus 434 ~~~-~~-----n~G~~~a~n~g~~~----a~g~~i~~ld~D~~~-~~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~ 498 (625)
T 2z86_A 434 FIS-QK-----NKGIGSASNTAVRL----CRGFYIGQLDSDDFL-EPDAVELCLDEFRKDLS----LACVYTTNRNIDRE 498 (625)
T ss_dssp EEE-EC-----CCCHHHHHHHHHHH----CCSSEEEECCTTCEE-CTTHHHHHHHHHHHCTT----CSEEEEEEEEECTT
T ss_pred EEe-CC-----CCCHHHHHHHHHHh----cCCCEEEEECCCccc-ChhHHHHHHHHHHhCCC----eeEEEeeeEEECCC
Confidence 764 33 46899999999999 899999999999987 5999999998885 555 78887765554432
Q ss_pred cCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccCCc
Q 004691 332 EHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGE 411 (736)
Q Consensus 332 ~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 411 (736)
.. .... .+.......+.+....++|++.++||+++.
T Consensus 499 ~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--------------------------------------- 534 (625)
T 2z86_A 499 GN-LISN----GYNWPIYSREKLTSAMICHHFRMFTARAWN--------------------------------------- 534 (625)
T ss_dssp SC-EEEE----CCCCSSCCHHHHTTSCCCCSCEEEEHHHHT---------------------------------------
T ss_pred CC-Eecc----CcccccCCHHHHhhcccCCceEEEEHHHHH---------------------------------------
Confidence 11 0000 000000011222345567888899999882
Q ss_pred cchhhHHHhhhhhccceeeccccccccccccCC-CccchHHHHHHHHHcCcEEEEeCCCCCeee---eccCCCHHHHHHH
Q 004691 412 NLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDPSRPQFL---GTSTTNLNDVLIQ 487 (736)
Q Consensus 412 ~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~rl~~~Gwrs~y~~~~~~~~~---g~aP~tl~~~~~Q 487 (736)
+.+||+.. ...||.++.+|+.++| ++.|+++ +... .....+.....+|
T Consensus 535 -------------------------~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~--~~~~~r~h~~~~s~~~~~~~ 586 (625)
T 2z86_A 535 -------------------------LTEGFNESISNAVDYDMYLKLSEVG-PFKHINK--ICYNRVLHGENTSIKKLDIQ 586 (625)
T ss_dssp -------------------------TTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEE--EEEEEECC----CCSSHHHH
T ss_pred -------------------------HhCCCCCccCChHHHHHHHHHHHhC-CEEEeCC--cEEEEEECCCccchhhHHHH
Confidence 23567754 4679999999999999 8899875 3332 2344555666777
Q ss_pred HHHHhccchhhh
Q 004691 488 GTRWASGLIDVS 499 (736)
Q Consensus 488 r~RWa~G~~qi~ 499 (736)
+.+|.+...+.+
T Consensus 587 ~~~~~~~~~~~l 598 (625)
T 2z86_A 587 KENHFKVVNESL 598 (625)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 777766544444
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.62 E-value=1.8e-15 Score=162.80 Aligned_cols=123 Identities=15% Similarity=0.016 Sum_probs=91.8
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004691 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p 172 (736)
.-|.|+|+||+ |||+ +.+.++|.++++++||. ..+|+|+||||+|.|.+.+.+. +.+
T Consensus 46 ~~~~vSViIp~---yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~~--------------~~~---- 102 (329)
T 3ckj_A 46 AGRTISVVLPA---LDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVAA--------------GAR---- 102 (329)
T ss_dssp TTCCEEEEEEE---SSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHHT--------------TCE----
T ss_pred cCCcEEEEEee---CCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHHh--------------hhh----
Confidence 45899999999 9998 78999999999999994 4799999999999876432211 000
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEE
Q 004691 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
+ .+++.
T Consensus 103 --------------------------------------------------------~------------------~~~~~ 108 (329)
T 3ckj_A 103 --------------------------------------------------------V------------------VSREQ 108 (329)
T ss_dssp --------------------------------------------------------E------------------EEHHH
T ss_pred --------------------------------------------------------h------------------cccee
Confidence 0 00011
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhh-cCCCCCCceEEEccCc
Q 004691 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFH-LDPKTSSSLAFVQFPQ 325 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~-~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq 325 (736)
++.+.+ .+.||++|+|.|++. ++||||+++|+|.. + +|++|.+++..+ .+|+ +++|++..
T Consensus 109 ~~~~~~----~n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~p~~l~~l~~~l~~~~~----~~~v~g~~ 170 (329)
T 3ckj_A 109 ALPEVP----IRPGKGEALWRSLAA----SRGDIVVFVDSDLINP-HPMFVPWLVGPLLTGDG----VHLVKSFY 170 (329)
T ss_dssp HCTTSC----CCCSHHHHHHHHHHH----CCCSEEEECCTTEESC-CTTHHHHHHHHHHSCSS----CCEEEEEE
T ss_pred eeccCC----CCCCHHHHHHHHHHh----CCCCEEEEECCCCCCc-ChHHHHHHHHHHHhCCC----ccEEEEEe
Confidence 111111 257899999999999 89999999999997 5 499999999885 5565 77777643
No 10
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.48 E-value=2.8e-15 Score=178.02 Aligned_cols=110 Identities=14% Similarity=0.167 Sum_probs=0.0
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004691 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~ 174 (736)
|.|+|+||| ||++ +.+.+||.|+++++||. ++|+|+||||+|.|.+.+.+.++
T Consensus 2 p~vSVIIp~---yN~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~--------------------- 54 (729)
T 3l7i_A 2 NKLTIIVTY---YNAE-EYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIK--------------------- 54 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEc---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHH---------------------
Confidence 789999999 9998 79999999999999994 89999999999977643322110
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEE
Q 004691 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
.|+ +++.++
T Consensus 55 -------------------------~~~----------------------------------------------~~i~~i 63 (729)
T 3l7i_A 55 -------------------------DYD----------------------------------------------KNIRFI 63 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------hCC----------------------------------------------CCEEEE
Confidence 000 135666
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004691 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~ 312 (736)
..++ +.|+++|.|.|++. ++||+|+++|+|.++. |++|.+++..+.++
T Consensus 64 ~~~~-----n~G~~~arN~gi~~----A~gdyI~flD~Dd~~~-p~~l~~l~~~l~~~ 111 (729)
T 3l7i_A 64 DLDE-----NSGHAHARNIALEE----VETPYFMFLDADDELA-SYAITFYLEKFNNT 111 (729)
T ss_dssp ----------------------------------------------------------
T ss_pred ECCC-----CCCHHHHHHHHHHh----ccCCEEEEECCCCCCC-hhHHHHHHHHhcCC
Confidence 5544 46899999999999 8999999999999974 99999999988743
No 11
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.47 E-value=1.5e-13 Score=160.98 Aligned_cols=123 Identities=17% Similarity=0.082 Sum_probs=89.3
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCce-EEEEEcCCCCccch-HhHHHHHHhhhhhhhhhhhcccccC
Q 004691 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKL-HVYLSDDGGSPITL-RGMREAFRFAKWWIPFCRRYRIKTI 170 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl-~v~v~DDg~~~~T~-~~l~Ea~~~a~~w~pfc~~~~v~~r 170 (736)
.-|+|+|+||| ||++ +.+.+||.|+++++|+.++. +|+|+|||++|.+- ..+.|..
T Consensus 178 ~~pkVSVVIpt---YN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~------------------ 235 (657)
T 4fix_A 178 GTANIAVGIPT---FNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAA------------------ 235 (657)
T ss_dssp SCCCEEEECCB---SSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHH------------------
T ss_pred CCCeEEEEEEe---cCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHH------------------
Confidence 35899999999 9998 79999999999999965544 89999999987321 1111110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
++ ..|+
T Consensus 236 -------------------------------~~-------------------------------------------~~~~ 241 (657)
T 4fix_A 236 -------------------------------AR-------------------------------------------LGSR 241 (657)
T ss_dssp -------------------------------HH-------------------------------------------HGGG
T ss_pred -------------------------------Hh-------------------------------------------cCCC
Confidence 00 0124
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC-CCCCCceEEEc
Q 004691 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-PKTSSSLAFVQ 322 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D-~~~~~~vg~VQ 322 (736)
+.++..+ +.|.|+|.|.|++.+....++|||+++|+|.++. |++|.+++.++.+ ++ ++.|+
T Consensus 242 I~vI~~~------N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~-pd~L~~ll~~l~~~~~----~~~vg 303 (657)
T 4fix_A 242 LSIHDQP------NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLE-PDSILRVLAMHRFAKA----PMLVG 303 (657)
T ss_dssp EEEEECC------CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEEC-THHHHHHHHHHHHBSS----CCEEE
T ss_pred EEEEECC------CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccC-hhHHHHHHHHHHhCCC----cEEEE
Confidence 6777543 3689999999998831112679999999999875 9999999998863 33 55554
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.40 E-value=1.6e-12 Score=143.24 Aligned_cols=120 Identities=18% Similarity=0.104 Sum_probs=88.4
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHc--CCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004691 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMA--LDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~--~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~ 171 (736)
.|.|+|+||| |||+ +.+.++|.++.+ .+||.+ .+|+|+||||+|.|.+.+.+. +.
T Consensus 93 ~p~vSVVIP~---yNe~-~~l~~~l~sl~~~l~~~~~~-~EIIVVDDgStD~T~~i~~~~--------------~~---- 149 (387)
T 3f1y_A 93 GLTVSAVLPS---RNVA-DTVGGIIDEIHALNERAPLI-DQILVVDADSEDGTAGVAASH--------------GA---- 149 (387)
T ss_dssp TCCEEEEEEE---SSCT-TTHHHHHHHHHHHHHHSCCC-SEEEEEECSCSSSHHHHHHHT--------------TC----
T ss_pred CCeEEEEEEc---CCCH-HHHHHHHHHHHHHHhcCCCC-eEEEEEcCcCCccHHHHHHHh--------------Cc----
Confidence 5899999999 9998 789999999987 477754 799999999999886432211 00
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeE
Q 004691 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
+++.. .+
T Consensus 150 --------------------------------------------------------~v~~~-----------------~~ 156 (387)
T 3f1y_A 150 --------------------------------------------------------EVYSE-----------------NE 156 (387)
T ss_dssp --------------------------------------------------------EEEEG-----------------GG
T ss_pred --------------------------------------------------------hhccc-----------------ce
Confidence 00000 00
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhhc-CCCCCCceEEEcc
Q 004691 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKTSSSLAFVQF 323 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~-~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 323 (736)
.++.+++ +.||++|+|.|++. ++||+|+++|||.. + +|++|.+++..+. +|+ +++|.+
T Consensus 157 ~~i~~~~-----n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~-~p~~L~~l~~~l~~~p~----~d~v~G 216 (387)
T 3f1y_A 157 LMSGYGD-----AHGKGDAMWRALSV----TRGDLVLYIDADTRDF-RPQLAYGVLGPVLEVPG----VRFVKA 216 (387)
T ss_dssp TTGGGCS-----CCSHHHHHHHHTTT----CCSSEEEECCTTCSSC-CTHHHHTTHHHHHHSTT----CCEEEE
T ss_pred eEecCCc-----cCCHHHHHHHHHHh----cCCCEEEEEcCCCCcC-CHHHHHHHHHHHHHCCC----ceEEEE
Confidence 1111222 57899999999998 89999999999998 5 4999999998885 555 566654
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.37 E-value=8.7e-13 Score=139.64 Aligned_cols=63 Identities=11% Similarity=-0.043 Sum_probs=45.7
Q ss_pred cccccCCCc---cchHHHHHHHHHcCcEEEEeCCCCCee----------eeccCCCHHHHHHHHHHHhccchhhhh
Q 004691 438 EVGFSYQSV---SEDFFTGFILHCKGWTSTYLDPSRPQF----------LGTSTTNLNDVLIQGTRWASGLIDVSI 500 (736)
Q Consensus 438 ~~G~~~~sv---tED~~t~~rl~~~Gwrs~y~~~~~~~~----------~g~aP~tl~~~~~Qr~RWa~G~~qi~~ 500 (736)
.+||+.... .||.++..|++.+||++.+.++..... ....|+.+....+||.||+.+.+..+.
T Consensus 189 vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~~ 264 (287)
T 2fy7_A 189 INGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLT 264 (287)
T ss_dssp TTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGCC
T ss_pred cCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccCc
Confidence 356876543 599999999999999877433211111 235789999999999999999998763
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.13 E-value=2.5e-10 Score=117.72 Aligned_cols=46 Identities=11% Similarity=-0.026 Sum_probs=39.9
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC-----CCCCCceEEE
Q 004691 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-----PKTSSSLAFV 321 (736)
Q Consensus 267 KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D-----~~~~~~vg~V 321 (736)
.|+|+|.|++. ++|||++++|+|.++ +|++|.+++..+.+ |+ +|.|
T Consensus 62 ~a~a~N~Gi~~----A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~~----vg~v 112 (249)
T 2nxv_A 62 GFSWHKQMLPR----CKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADPK----WLVA 112 (249)
T ss_dssp TTTHHHHHGGG----CCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCTT----EEEE
T ss_pred HHHHHHHHHHh----cCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCCC----eeEE
Confidence 46789999999 899999999999997 59999999998863 65 8877
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.76 E-value=1.4e-07 Score=103.90 Aligned_cols=42 Identities=21% Similarity=0.092 Sum_probs=36.6
Q ss_pred CCChHHHHHHHH----HhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhhc
Q 004691 264 HHFKGGALNVLL----RVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL 310 (736)
Q Consensus 264 ~~~KAGaLN~al----~~~~~~t~g~~Il~lDAD~~-~~~p~~L~~~v~~f~ 310 (736)
+.||++|+|.|+ +. ++||+|+++|||.. .+ |+.+.+++....
T Consensus 73 n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~~-P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEE----TQWERIHFYDADITSFG-PDWITKAEEAAD 119 (397)
T ss_dssp SSSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCC-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCC-HHHHHHHHHHHH
Confidence 469999999999 77 89999999999985 44 999999888764
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.13 E-value=7.6e-06 Score=89.42 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=32.2
Q ss_pred CCChHHHHHHHHHhcCCCC---CCCEEEEeCCCCCCCchHHHHHHHH
Q 004691 264 HHFKGGALNVLLRVSGVIS---NSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t---~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (736)
+.||..||-.|+.. + +||+|+++|||-+ .|..+.+.+.
T Consensus 142 r~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~--iP~~v~~~~k 182 (394)
T 2zu9_A 142 RSGKGEGMLVGLLL----AKAIGAEYVGFVDADNY--IPGAVNEYVK 182 (394)
T ss_dssp CCSHHHHHHHHHHH----HHHTTCSEEEECCSCBS--CHHHHHHHHH
T ss_pred cCChHHHHHHHHHH----HhhCCCCEEEEEeCCCC--CHHHHHHHHH
Confidence 35999999999998 6 8999999999995 3888866554
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=98.02 E-value=1.4e-05 Score=85.46 Aligned_cols=44 Identities=7% Similarity=-0.016 Sum_probs=36.8
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccch
Q 004691 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITL 145 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~ 145 (736)
....++|+||+ |||+. +++.+++++.+.. .+|+|+|||+.|.|.
T Consensus 51 i~~klSIVVPv---YNEe~----~lLesVl~qi~~d--~eIIlVdDGS~D~s~ 94 (391)
T 2wvl_A 51 VLEQTAIVVPT---RNERL----KLLEGVLSGIPHE--ALILVASNSSPDRFQ 94 (391)
T ss_dssp HHTTEEEEEEE---SSCCH----HHHHHHHHTSCTT--SEEEEEECCCHHHHH
T ss_pred HHhceEEEEec---cCcHH----HHHHHHHhcCCCC--ceEEEEECCCCCChH
Confidence 35789999999 99994 4688888888663 899999999998663
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.68 E-value=0.00011 Score=79.39 Aligned_cols=46 Identities=15% Similarity=0.190 Sum_probs=39.9
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc
Q 004691 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T 144 (736)
++.+.|+|+| ||-| + +.+++.++++++.+.++..|+|+|||+.+.|
T Consensus 1 ~~~~pViI~~---yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~ 46 (343)
T 1fo8_A 1 LAVIPILVIA---CDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET 46 (343)
T ss_dssp CCCCCEEEEE---SSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH
T ss_pred CCcccEEEEE---CCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHH
Confidence 3568899999 8998 7 9999999999997777788999999998743
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=70.01 E-value=23 Score=36.61 Aligned_cols=53 Identities=15% Similarity=-0.038 Sum_probs=36.1
Q ss_pred cchHHHHHHHHHcCcEEEEeCCC---C-Ceee---------eccCCCHHHHHHHHHHHhccchhhh
Q 004691 447 SEDFFTGFILHCKGWTSTYLDPS---R-PQFL---------GTSTTNLNDVLIQGTRWASGLIDVS 499 (736)
Q Consensus 447 tED~~t~~rl~~~Gwrs~y~~~~---~-~~~~---------g~aP~tl~~~~~Qr~RWa~G~~qi~ 499 (736)
.||.+...|+...|.++.-.+.. + .++. ...|......-.+++||..+.+..+
T Consensus 185 gEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 185 LEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp SHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred ccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeee
Confidence 69999999999999987643310 0 1121 1234456666788999998888766
No 20
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=47.54 E-value=38 Score=33.63 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=32.1
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004691 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 267 KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
....+-+|++......+.++++++|||+=.-+++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 457788888763210125899999999754468999999887764
No 21
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=27.73 E-value=1.2e+02 Score=28.58 Aligned_cols=42 Identities=14% Similarity=-0.013 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004691 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 265 ~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
.|-++++..|++.. .+.+.+++++||+-.-+++.+++++..+
T Consensus 71 ~G~~~si~~al~~~---~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 71 EGISTSLKLGLRFF---KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp GCHHHHHHHHHHHT---TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhh---ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 46788999999872 2348999999999323489999988766
No 22
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=25.79 E-value=83 Score=32.13 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=27.6
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEE
Q 004691 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAF 320 (736)
Q Consensus 282 t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~ 320 (736)
.+.++++..|.|++++ .+-|.+.+..+ ||+..--+|.
T Consensus 92 ~~~~Wf~~~DDDtyv~-~~nL~~~L~~~-d~~~~~YiG~ 128 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVN-PKALLQLLKTF-PQDRDVYVGK 128 (280)
T ss_dssp HTCSEEEEEETTEEEC-HHHHHHHHTTS-CTTSCCEEEC
T ss_pred CCCcEEEEeCCCcEEc-HHHHHHHHHhC-CCCCCEEEEE
Confidence 5789999999999986 88888887755 5543333443
No 23
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=25.71 E-value=56 Score=32.30 Aligned_cols=46 Identities=9% Similarity=-0.002 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHhcCC---CCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004691 266 FKGGALNVLLRVSGV---ISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 266 ~KAGaLN~al~~~~~---~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
+..+++-+|++.... ..+.++|+++|||+-.-.++.+++++..+.+
T Consensus 84 ~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~ 132 (246)
T 3f1c_A 84 DRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALE 132 (246)
T ss_dssp SHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 467788888876310 0136899999999843458999999988764
No 24
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=22.40 E-value=95 Score=29.86 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=31.9
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHhhcC
Q 004691 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (736)
Q Consensus 264 ~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~-~~~~p~~L~~~v~~f~D 311 (736)
..+.+++++ +++. .+.|.+++++||+ .+ +++.+++++..+.+
T Consensus 71 ~~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~ 113 (234)
T 2y6p_A 71 PSGSDRVLY-VVRD----LDVDLIINYQGDEPFV-YEEDIKLIFRELEK 113 (234)
T ss_dssp CSHHHHHHH-HHTT----CCCSEEEECCTTCCCC-CHHHHHHHHHHHHH
T ss_pred ccchHHHHH-HHHh----CCCCEEEEecCCcCcC-CHHHHHHHHHHHHh
Confidence 356777774 5665 4678999999999 65 48899999887753
No 25
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=21.68 E-value=1.6e+02 Score=27.88 Aligned_cols=41 Identities=10% Similarity=0.155 Sum_probs=32.2
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004691 266 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 266 ~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.++++..|++.. .+.+.+++++||+-.-+++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 4688899999872 1678999999998333488999998877
No 26
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=20.49 E-value=1.1e+02 Score=29.14 Aligned_cols=39 Identities=15% Similarity=0.153 Sum_probs=32.3
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHh
Q 004691 265 HFKGGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCF 308 (736)
Q Consensus 265 ~~KAGaLN~al~~~~~~t~g~~Il~lDAD~-~~~~p~~L~~~v~~ 308 (736)
.+-++++-.|++. .+.+.+++++||+ .+ +++.+++++..
T Consensus 77 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~ 116 (201)
T 1e5k_A 77 PGPLAGMLSVMQQ----EAGEWFLFCPCDTPYI-PPDLAARLNHQ 116 (201)
T ss_dssp CSHHHHHHHHHHH----CCSSEEEEEETTCTTC-CTTHHHHHHHT
T ss_pred CCHHHHHHHHHHh----CCCCcEEEEeCCcCcC-CHHHHHHHHhh
Confidence 5789999999998 5679999999999 44 48888888765
Done!