Query 004692
Match_columns 736
No_of_seqs 323 out of 2034
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 11:18:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004692.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004692hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02436 cellulose synthase A 100.0 2E-173 3E-178 1498.5 59.0 712 2-731 267-1072(1094)
2 PLN02400 cellulose synthase 100.0 8E-174 2E-178 1507.2 55.8 714 1-731 257-1062(1085)
3 PLN02638 cellulose synthase A 100.0 1E-173 3E-178 1505.3 55.4 712 3-731 253-1057(1079)
4 PLN02195 cellulose synthase A 100.0 9E-173 2E-177 1487.7 58.0 711 3-731 156-953 (977)
5 PLN02189 cellulose synthase 100.0 1E-172 2E-177 1493.8 56.5 711 3-731 235-1018(1040)
6 PLN02915 cellulose synthase A 100.0 1E-171 3E-176 1485.0 59.6 712 4-731 192-1022(1044)
7 PLN02190 cellulose synthase-li 100.0 1E-171 3E-176 1452.7 57.5 704 1-731 5-755 (756)
8 PLN02248 cellulose synthase-li 100.0 1E-170 2E-175 1478.8 57.4 716 4-731 267-1116(1135)
9 PLN02893 Cellulose synthase-li 100.0 1E-169 2E-174 1445.1 61.4 702 2-735 9-733 (734)
10 PF03552 Cellulose_synt: Cellu 100.0 4E-159 8E-164 1348.0 40.9 623 97-731 1-704 (720)
11 PRK11498 bcsA cellulose syntha 100.0 1.6E-73 3.5E-78 672.3 52.7 487 22-713 188-686 (852)
12 TIGR03030 CelA cellulose synth 100.0 6.7E-73 1.5E-77 669.4 54.9 508 20-714 56-574 (713)
13 PRK05454 glucosyltransferase M 100.0 6.2E-39 1.3E-43 374.8 53.6 343 19-528 40-403 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 7.8E-36 1.7E-40 336.8 40.8 230 91-501 71-306 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 1.5E-36 3.3E-41 318.2 25.1 242 97-497 1-253 (254)
16 COG1215 Glycosyltransferases, 100.0 2.1E-35 4.6E-40 330.5 30.7 233 94-501 53-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 1.3E-33 2.9E-38 315.8 40.7 230 91-501 50-285 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 4.4E-34 9.5E-39 322.1 36.4 282 91-553 45-341 (439)
19 PRK14716 bacteriophage N4 adso 100.0 4.7E-31 1E-35 299.2 37.8 263 92-524 63-353 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 2.1E-30 4.6E-35 266.1 23.0 227 95-495 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 3.7E-30 8E-35 262.6 22.0 229 95-499 1-234 (234)
22 PRK11234 nfrB bacteriophage N4 100.0 3.3E-28 7.1E-33 286.2 36.5 240 87-500 56-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 3.3E-29 7.2E-34 259.3 22.2 231 95-501 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 4.8E-28 1E-32 248.5 22.0 229 98-500 1-233 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 100.0 8.1E-29 1.8E-33 252.6 9.7 224 95-494 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 99.9 2.9E-26 6.3E-31 253.4 25.7 228 92-496 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 99.9 5.7E-27 1.2E-31 244.0 15.3 172 270-497 64-243 (244)
28 PRK15489 nfrB bacteriophage N4 99.9 8.4E-24 1.8E-28 246.4 35.4 236 91-499 67-341 (703)
29 cd02520 Glucosylceramide_synth 99.9 1.5E-25 3.2E-30 224.9 17.9 193 95-494 1-195 (196)
30 cd04192 GT_2_like_e Subfamily 99.9 1.6E-24 3.4E-29 219.7 20.7 222 99-494 1-229 (229)
31 cd06434 GT2_HAS Hyaluronan syn 99.9 3E-24 6.6E-29 219.6 19.8 229 96-497 1-234 (235)
32 cd06439 CESA_like_1 CESA_like_ 99.9 9.5E-24 2.1E-28 218.6 23.3 228 88-498 22-251 (251)
33 TIGR03469 HonB hopene-associat 99.9 3.3E-22 7.1E-27 222.0 33.0 229 91-492 36-279 (384)
34 COG2943 MdoH Membrane glycosyl 99.9 3.1E-20 6.8E-25 202.3 44.9 344 18-528 62-423 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 1.1E-20 2.4E-25 194.0 21.4 224 96-500 1-232 (249)
36 cd06438 EpsO_like EpsO protein 99.8 2.4E-19 5.3E-24 177.7 13.3 161 99-371 1-167 (183)
37 cd06436 GlcNAc-1-P_transferase 99.8 4.5E-19 9.7E-24 177.6 14.9 164 99-371 1-175 (191)
38 PF13632 Glyco_trans_2_3: Glyc 99.8 1.1E-17 2.3E-22 167.0 14.9 137 286-495 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.8 2.7E-17 5.9E-22 164.1 17.4 193 95-468 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 2.4E-16 5.2E-21 157.4 17.6 189 98-468 1-195 (201)
41 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.5E-15 3.3E-20 162.6 20.3 110 98-311 1-110 (299)
42 cd06433 GT_2_WfgS_like WfgS an 99.7 1.3E-15 2.9E-20 150.3 16.9 186 98-468 1-188 (202)
43 PLN02726 dolichyl-phosphate be 99.7 6.1E-15 1.3E-19 153.2 20.3 123 93-324 7-129 (243)
44 cd04196 GT_2_like_d Subfamily 99.6 4.5E-15 9.7E-20 148.9 17.6 193 98-468 1-197 (214)
45 cd02522 GT_2_like_a GT_2_like_ 99.6 1.6E-14 3.4E-19 146.2 17.7 178 97-465 1-178 (221)
46 cd06913 beta3GnTL1_like Beta 1 99.6 2.8E-14 6E-19 145.2 19.5 111 99-311 1-111 (219)
47 cd06442 DPM1_like DPM1_like re 99.6 2.5E-14 5.5E-19 145.0 19.0 114 99-324 1-114 (224)
48 cd06420 GT2_Chondriotin_Pol_N 99.6 3.4E-14 7.3E-19 139.4 17.2 107 99-313 1-107 (182)
49 PRK10073 putative glycosyl tra 99.6 2.6E-14 5.6E-19 155.7 17.3 109 94-312 5-113 (328)
50 cd04186 GT_2_like_c Subfamily 99.6 2.2E-14 4.7E-19 137.4 14.9 157 99-468 1-159 (166)
51 PF13506 Glyco_transf_21: Glyc 99.6 2.4E-14 5.2E-19 142.3 13.6 153 264-493 15-175 (175)
52 PF03142 Chitin_synth_2: Chiti 99.6 1.1E-12 2.4E-17 149.0 27.4 167 283-500 201-379 (527)
53 cd04185 GT_2_like_b Subfamily 99.5 1.8E-13 4E-18 137.0 16.9 113 99-322 1-113 (202)
54 cd06423 CESA_like CESA_like is 99.5 6.1E-14 1.3E-18 133.6 12.5 160 99-371 1-166 (180)
55 cd04188 DPG_synthase DPG_synth 99.5 4.2E-13 9E-18 135.8 17.3 108 99-313 1-111 (211)
56 cd02526 GT2_RfbF_like RfbF is 99.5 1.2E-13 2.7E-18 141.4 13.3 140 251-468 49-198 (237)
57 PRK10018 putative glycosyl tra 99.5 5.5E-13 1.2E-17 142.1 18.1 109 93-310 3-111 (279)
58 PRK10063 putative glycosyl tra 99.5 9.2E-13 2E-17 138.1 19.0 48 95-146 1-49 (248)
59 PF00535 Glycos_transf_2: Glyc 99.5 8.5E-14 1.8E-18 132.5 8.6 163 98-371 1-165 (169)
60 PTZ00260 dolichyl-phosphate be 99.4 2.4E-11 5.1E-16 132.9 23.8 128 92-323 67-200 (333)
61 cd04179 DPM_DPG-synthase_like 99.4 1.4E-12 3E-17 128.1 12.7 120 99-329 1-120 (185)
62 TIGR01556 rhamnosyltran L-rham 99.3 2.6E-11 5.6E-16 128.6 15.1 145 249-468 45-195 (281)
63 PRK13915 putative glucosyl-3-p 99.3 7.2E-11 1.6E-15 127.6 16.8 124 92-323 28-152 (306)
64 cd04187 DPM1_like_bac Bacteria 99.3 5.5E-11 1.2E-15 117.1 13.8 50 250-309 56-105 (181)
65 PRK10714 undecaprenyl phosphat 99.2 2.4E-09 5.3E-14 116.7 23.1 110 94-310 5-116 (325)
66 KOG2571 Chitin synthase/hyalur 99.2 2.8E-10 6E-15 133.8 15.5 167 265-494 424-596 (862)
67 cd00761 Glyco_tranf_GTA_type G 99.2 6.2E-10 1.3E-14 103.3 14.8 113 99-324 1-114 (156)
68 PF10111 Glyco_tranf_2_2: Glyc 99.1 1.4E-09 3E-14 116.1 17.5 134 265-468 74-216 (281)
69 COG1216 Predicted glycosyltran 99.1 3.1E-09 6.6E-14 114.7 19.1 209 94-480 2-225 (305)
70 COG0463 WcaA Glycosyltransfera 98.9 2.1E-08 4.5E-13 95.8 12.0 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 98.8 3.1E-08 6.8E-13 102.1 12.5 44 264-312 56-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.6 1.3E-07 2.7E-12 101.4 8.9 225 92-493 82-314 (431)
73 KOG2978 Dolichol-phosphate man 98.2 4.5E-05 9.7E-10 75.3 15.1 60 250-323 64-123 (238)
74 KOG2977 Glycosyltransferase [G 97.9 5.9E-05 1.3E-09 78.9 10.8 110 96-309 68-185 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.9 0.00014 3.1E-09 79.4 12.7 43 97-143 2-44 (334)
76 KOG3737 Predicted polypeptide 96.2 0.018 3.9E-07 62.8 8.7 49 91-142 151-199 (603)
77 PF02364 Glucan_synthase: 1,3- 95.5 0.23 5E-06 59.8 14.7 75 444-523 408-483 (817)
78 PF13704 Glyco_tranf_2_4: Glyc 95.4 0.037 8.1E-07 49.0 6.0 35 107-146 1-35 (97)
79 KOG3738 Predicted polypeptide 94.9 0.074 1.6E-06 58.4 7.5 49 92-143 121-169 (559)
80 KOG3736 Polypeptide N-acetylga 94.4 0.045 9.8E-07 63.7 5.0 48 92-142 139-186 (578)
81 PF13712 Glyco_tranf_2_5: Glyc 93.0 0.28 6E-06 50.7 7.4 49 265-321 40-89 (217)
82 PF03071 GNT-I: GNT-I family; 91.2 2.1 4.5E-05 48.6 12.0 48 92-144 90-138 (434)
83 PRK14503 mannosyl-3-phosphogly 89.1 3.2 6.9E-05 45.7 10.7 43 264-309 142-184 (393)
84 TIGR02460 osmo_MPGsynth mannos 88.6 3.7 7.9E-05 45.0 10.7 43 264-309 141-183 (381)
85 PF01644 Chitin_synth_1: Chiti 87.3 16 0.00035 36.2 13.5 53 250-308 110-162 (163)
86 PF09488 Osmo_MPGsynth: Mannos 86.1 7.3 0.00016 43.0 11.4 43 264-309 141-183 (381)
87 PF03452 Anp1: Anp1; InterPro 83.6 12 0.00025 40.1 11.4 56 92-151 22-79 (269)
88 KOG0916 1,3-beta-glucan syntha 82.1 62 0.0013 41.7 18.0 72 445-521 1173-1245(1679)
89 PRK14502 bifunctional mannosyl 81.1 11 0.00024 45.3 11.1 43 264-309 146-188 (694)
90 COG4092 Predicted glycosyltran 76.6 28 0.00062 37.0 11.1 80 248-330 61-141 (346)
91 cd00899 b4GalT Beta-4-Galactos 70.7 24 0.00053 36.6 9.1 53 447-499 138-200 (219)
92 PF05679 CHGN: Chondroitin N-a 54.3 1.1E+02 0.0023 35.8 11.5 47 251-305 316-362 (499)
93 PF13896 Glyco_transf_49: Glyc 52.0 19 0.00041 39.5 4.6 46 271-321 119-164 (317)
94 PRK09382 ispDF bifunctional 2- 46.8 47 0.001 37.4 6.8 40 267-310 83-122 (378)
95 TIGR03584 PseF pseudaminic aci 44.8 2.3E+02 0.0049 29.2 11.1 59 265-323 76-134 (222)
96 PF02709 Glyco_transf_7C: N-te 39.0 23 0.00051 30.5 2.3 30 439-468 35-67 (78)
97 PF11316 Rhamno_transf: Putati 32.4 4.6E+02 0.01 27.5 11.1 42 267-310 97-140 (234)
98 PF06306 CgtA: Beta-1,4-N-acet 29.2 2E+02 0.0044 31.7 7.8 35 264-302 159-193 (347)
99 PF09949 DUF2183: Uncharacteri 28.5 1.2E+02 0.0026 27.5 5.2 25 117-142 53-77 (100)
100 COG4097 Predicted ferric reduc 27.7 2.2E+02 0.0048 32.1 7.8 67 93-178 342-408 (438)
101 cd02503 MobA MobA catalyzes th 26.1 2.3E+02 0.005 27.4 7.3 42 264-309 68-109 (181)
102 PF02434 Fringe: Fringe-like; 25.3 2.4E+02 0.0052 29.8 7.6 27 282-309 85-111 (252)
103 KOG4179 Lysyl hydrolase/glycos 23.1 2.9E+02 0.0064 31.4 7.7 36 267-307 98-133 (568)
104 cd02540 GT2_GlmU_N_bac N-termi 22.8 2.9E+02 0.0064 27.7 7.5 46 264-311 72-117 (229)
105 PF01762 Galactosyl_T: Galacto 22.6 2E+02 0.0043 28.7 6.1 37 269-309 69-105 (195)
106 PRK02726 molybdopterin-guanine 22.5 2.9E+02 0.0063 27.7 7.4 42 265-310 78-119 (200)
107 PF06638 Strabismus: Strabismu 22.5 3.2E+02 0.0069 31.9 8.1 82 648-733 88-181 (505)
108 PF04724 Glyco_transf_17: Glyc 22.4 2.4E+02 0.0051 31.6 7.1 36 267-304 163-198 (356)
109 PF03213 Pox_P35: Poxvirus P35 21.6 5.8E+02 0.013 28.1 9.5 45 282-330 117-161 (325)
110 PF15050 SCIMP: SCIMP protein 21.4 1.1E+02 0.0025 28.6 3.6 40 588-628 2-46 (133)
111 TIGR03310 matur_ygfJ molybdenu 21.0 2.5E+02 0.0054 27.2 6.4 43 265-310 74-116 (188)
112 PRK00317 mobA molybdopterin-gu 20.4 2.1E+02 0.0045 28.3 5.7 42 265-310 74-115 (193)
No 1
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1.6e-173 Score=1498.54 Aligned_cols=712 Identities=33% Similarity=0.646 Sum_probs=656.0
Q ss_pred CC-CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeec
Q 004692 2 DS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPV 79 (736)
Q Consensus 2 ~~-~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~ 79 (736)
|+ .+|||++++.++.+ +.||+++++++++++++|+||+++.. ..+.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 267 ~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~----~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv 342 (1094)
T PLN02436 267 DEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPV----NDAYGLWLTSVICEIWFAVSWILDQFPKWYPI 342 (1094)
T ss_pred cccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----cccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 44 78899999998874 56999999999999999999999843 23689999999999999999999999999999
Q ss_pred cccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHH
Q 004692 80 SRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREAC 152 (736)
Q Consensus 80 ~r~~~~~~l~~-------~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~ 152 (736)
+|.+++++|.+ ++++|.|||||+|+||++|||.++.|||+|+||.|||.|||+|||+|||++.+|+++|.||+
T Consensus 343 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 422 (1094)
T PLN02436 343 ERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETS 422 (1094)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999998863 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhcCCccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC--------------
Q 004692 153 RFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-GE-------------- 216 (736)
Q Consensus 153 ~fa~~wvpfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~-g~-------------- 216 (736)
+|||+||||||||+||||+||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.+. +.
T Consensus 423 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W 502 (1094)
T PLN02436 423 EFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPW 502 (1094)
T ss_pred HHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccC
Confidence 999999999999999999999999988 55677788999999999999999999999988653 11
Q ss_pred -CCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 004692 217 -YGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY 295 (736)
Q Consensus 217 -~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~ 295 (736)
+.+++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|++|||+|||+|+||||+
T Consensus 503 ~g~~~~dHp~IIqVll~~~~~----~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmY 578 (1094)
T PLN02436 503 PGNNVRDHPGMIQVFLGHSGV----RDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHY 578 (1094)
T ss_pred CCCCCCCCccceEEEecCCCC----cccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccc
Confidence 45789999999999998764 2557788999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-C
Q 004692 296 CNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-N 374 (736)
Q Consensus 296 ~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~ 374 (736)
+|||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .
T Consensus 579 iNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~ 658 (1094)
T PLN02436 579 INNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658 (1094)
T ss_pred cCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred ccccc----------------------------------------------------------------cchHhhHhhhc
Q 004692 375 FKHKG----------------------------------------------------------------IDLAELKDTFG 390 (736)
Q Consensus 375 ~~~~~----------------------------------------------------------------~d~~~~~~~~~ 390 (736)
|+... .+...+.++||
T Consensus 659 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG 738 (1094)
T PLN02436 659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFG 738 (1094)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhc
Confidence 43100 00123457899
Q ss_pred CchhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCC
Q 004692 391 ESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSR 470 (736)
Q Consensus 391 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~ 470 (736)
+|.+|++|+..+..+. +....++++++||++|+||+||++|+||+++||.|+|+|||+.||++||++||||+||+|++
T Consensus 739 ~S~~fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r 816 (1094)
T PLN02436 739 QSPVFVASTLLENGGV--PRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR 816 (1094)
T ss_pred ccHHHHHHHHHhhcCC--CCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCc
Confidence 9999999998887432 23335678999999999999999999999999999999999999999999999999998878
Q ss_pred CeeEeccCcCHHHHHHhhHHHhcccchhhhhhcCCcccCC-CCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcC
Q 004692 471 PQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP-SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNG 549 (736)
Q Consensus 471 ~~~~g~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g 549 (736)
++|.|+||+|+.+++.||+|||+|++||+++|+||+++|. ++|++.||++|+++++|| +.++|.++|+++|++||++|
T Consensus 817 ~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G 895 (1094)
T PLN02436 817 PAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTG 895 (1094)
T ss_pred hhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999999999999999999763 589999999999999999 99999999999999999999
Q ss_pred CCcccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCc
Q 004692 550 IPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKV 629 (736)
Q Consensus 550 ~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~ 629 (736)
++++|.++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++++|++++++|.||+|.
T Consensus 896 ~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~ 975 (1094)
T PLN02436 896 KFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKA 975 (1094)
T ss_pred CeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 004692 630 LDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRK 707 (736)
Q Consensus 630 ~~~~~~~~y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~r~~~~~--~~~~~~~~~~~~~~~v~~l~p~~~al~~r~ 707 (736)
.+.+. ..++|+|+ ++++++|+++++++|++|+++|+++++.+| .|+.+++++|+++|++++++||++||++|
T Consensus 976 ~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr- 1049 (1094)
T PLN02436 976 ADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK- 1049 (1094)
T ss_pred ccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 76432 12678998 899999999999999999999999998755 68899999999999999999999999954
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhh
Q 004692 708 DKGRISPSAILLSSVFFVTFLFFG 731 (736)
Q Consensus 708 ~~~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
++++|+++++||++||++|+++-
T Consensus 1050 -~~r~P~~v~v~s~lla~~~~l~~ 1072 (1094)
T PLN02436 1050 -QDRMPTIILVWSILLASILTLLW 1072 (1094)
T ss_pred -CCCCCeeehHHHHHHHHHHHHHH
Confidence 55999999999999999999863
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=8.3e-174 Score=1507.24 Aligned_cols=714 Identities=33% Similarity=0.643 Sum_probs=658.0
Q ss_pred CCC-CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheee
Q 004692 1 MDS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRP 78 (736)
Q Consensus 1 ~~~-~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p 78 (736)
||. .+|||++++.++.+ .+||+++++++++++++|+||+++.. ..+.|+|+++++||+||+|+|+|+|+.||+|
T Consensus 257 ~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~P 332 (1085)
T PLN02400 257 ADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPV----KDAYGLWLTSVICEIWFALSWLLDQFPKWYP 332 (1085)
T ss_pred cccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----cccHHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 344 68899999998874 67999999999999999999999843 2368999999999999999999999999999
Q ss_pred ccccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHH
Q 004692 79 VSRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREA 151 (736)
Q Consensus 79 ~~r~~~~~~l~~-------~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~ 151 (736)
++|.+++++|++ ++++|.|||||||+||++|||.++.|||+|+||.|||.|||+|||+|||++.+|+++|.||
T Consensus 333 v~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Ea 412 (1085)
T PLN02400 333 INRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSET 412 (1085)
T ss_pred ccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHH
Confidence 999999998863 2469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhhcCCccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhh-------hcCC-------
Q 004692 152 CRFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-------EDGE------- 216 (736)
Q Consensus 152 ~~fa~~wvpfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~-------~~g~------- 216 (736)
++|||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+. +.|+
T Consensus 413 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~ 492 (1085)
T PLN02400 413 AEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTP 492 (1085)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCcc
Confidence 9999999999999999999999999988 556678889999999999999999999999875 2221
Q ss_pred --CCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 004692 217 --YGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDM 294 (736)
Q Consensus 217 --~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~ 294 (736)
+.+++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|++|||+|||+|+||||
T Consensus 493 W~g~~~~dHp~iIqVll~~~~~----~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDm 568 (1085)
T PLN02400 493 WPGNNPRDHPGMIQVFLGHSGG----LDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDH 568 (1085)
T ss_pred CCCCCCCCCchhhhhhhcCCCC----cccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEeccccc
Confidence 45789999999999998764 245678899999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-
Q 004692 295 YCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG- 373 (736)
Q Consensus 295 ~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~- 373 (736)
|+|||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+||||
T Consensus 569 Y~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~ 648 (1085)
T PLN02400 569 YFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGY 648 (1085)
T ss_pred ccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccccc-----c---------------------------------------------------------cchHhhHhhhcC
Q 004692 374 NFKHK-----G---------------------------------------------------------IDLAELKDTFGE 391 (736)
Q Consensus 374 ~~~~~-----~---------------------------------------------------------~d~~~~~~~~~~ 391 (736)
.|+.. . .+.++++++||+
T Consensus 649 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~ 728 (1085)
T PLN02400 649 DPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQ 728 (1085)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccc
Confidence 44200 0 001235568999
Q ss_pred chhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCC
Q 004692 392 SNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRP 471 (736)
Q Consensus 392 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~ 471 (736)
|.+|++|+..+. ++ .+....++++++||++|+||+||++|+||+++||.|+|+|||+.||++||++||||+|++|+++
T Consensus 729 S~~fi~S~~~~~-~~-~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~ 806 (1085)
T PLN02400 729 SPVFIAATFMEQ-GG-IPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRP 806 (1085)
T ss_pred cHHHHHHHHHHh-cC-CCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcH
Confidence 999999998543 22 2333456889999999999999999999999999999999999999999999999999998789
Q ss_pred eeEeccCcCHHHHHHhhHHHhcccchhhhhhcCCcccC-CCCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCC
Q 004692 472 QFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGI 550 (736)
Q Consensus 472 ~~~g~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~ 550 (736)
+|.|+||+|+.+++.||+|||+|++||+++|+||++++ .++|++.||++|+++++|| +.++|.++|+++|++||++|+
T Consensus 807 af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG~ 885 (1085)
T PLN02400 807 AFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITNK 885 (1085)
T ss_pred hhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999976 3789999999999999999 999999999999999999999
Q ss_pred CcccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCcc
Q 004692 551 PLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL 630 (736)
Q Consensus 551 ~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~ 630 (736)
+++|.++.+++++|+++++++++++++|++|+|.++++|||+||+|+|.++++++++++++++++|++++++|.||+|..
T Consensus 886 ~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~ 965 (1085)
T PLN02400 886 FIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 965 (1085)
T ss_pred ccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred chhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 004692 631 DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKD 708 (736)
Q Consensus 631 ~~~~~~~y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~r~~~~~--~~~~~~~~~~~~~~~v~~l~p~~~al~~r~~ 708 (736)
+.+.. .+++|+|+ ++++++|+++++++|++|+++|+++++.++ .|+.+++++|+++|++++++||++||++|+
T Consensus 966 d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~- 1040 (1085)
T PLN02400 966 DEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ- 1040 (1085)
T ss_pred ccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 64321 25899999 999999999999999999999999998755 688999999999999999999999999887
Q ss_pred CCCCChhHHHHHHHHHHHHHHhh
Q 004692 709 KGRISPSAILLSSVFFVTFLFFG 731 (736)
Q Consensus 709 ~~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
+++|+++++||++||++|+++-
T Consensus 1041 -~r~P~~v~~~s~lla~~~~l~~ 1062 (1085)
T PLN02400 1041 -NRTPTIVIVWSILLASIFSLLW 1062 (1085)
T ss_pred -CCCceeHHHHHHHHHHHHHHHh
Confidence 8999999999999999999863
No 3
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1.2e-173 Score=1505.29 Aligned_cols=712 Identities=33% Similarity=0.643 Sum_probs=658.9
Q ss_pred CCCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeeccc
Q 004692 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
+.+|||++++.++.+ .+||+++++++++++++|+||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 478899999998873 67999999999999999999999843 4568999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHh
Q 004692 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (736)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~f 154 (736)
.+++++|++ ++++|.|||||||+||++|||.++.|||+|+||.|||.|||+|||+|||++.+|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998864 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004692 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (736)
Q Consensus 155 a~~wvpfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~-------~g~---------~ 217 (736)
||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+.+ .|+ +
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 9999999999999999999999988 5567888899999999999999999999998752 222 4
Q ss_pred CCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004692 218 GNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (736)
Q Consensus 218 ~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~ 297 (736)
.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+|+||||++|
T Consensus 489 ~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN 564 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN 564 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence 57899999999999987643 45677899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-Ccc
Q 004692 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 376 (736)
Q Consensus 298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~ 376 (736)
||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+|||+|+||||+|||+|||| .|+
T Consensus 565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~ 644 (1079)
T PLN02638 565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 644 (1079)
T ss_pred chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 454
Q ss_pred ccc--------------------------c-------------------------------ch-------HhhHhhhcCc
Q 004692 377 HKG--------------------------I-------------------------------DL-------AELKDTFGES 392 (736)
Q Consensus 377 ~~~--------------------------~-------------------------------d~-------~~~~~~~~~~ 392 (736)
... . +. ..+.++||+|
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S 724 (1079)
T PLN02638 645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 724 (1079)
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence 210 0 00 1344789999
Q ss_pred hhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCe
Q 004692 393 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQ 472 (736)
Q Consensus 393 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~ 472 (736)
.+|++|+..+.++.. ....++++++||++|+||+||++|+||+++||.|+|+|||+.||++||++||||+|++|++++
T Consensus 725 ~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 802 (1079)
T PLN02638 725 AVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA 802 (1079)
T ss_pred HHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence 999999988876543 234568999999999999999999999999999999999999999999999999999877889
Q ss_pred eEeccCcCHHHHHHhhHHHhcccchhhhhhcCCcccC-CCCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCC
Q 004692 473 FLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIP 551 (736)
Q Consensus 473 ~~g~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~ 551 (736)
|.|+||+|+.+++.||+|||+|++||+++|+||++++ .++|++.||++|+++++|| +.++|.++|+++|++||++|++
T Consensus 803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~ 881 (1079)
T PLN02638 803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF 881 (1079)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999976 3789999999999999999 9999999999999999999999
Q ss_pred cccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccc
Q 004692 552 LYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLD 631 (736)
Q Consensus 552 ~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~ 631 (736)
++|+++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++++|++++++|.||+|..+
T Consensus 882 i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d 961 (1079)
T PLN02638 882 IIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASD 961 (1079)
T ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccc
Confidence 99999999899999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 004692 632 NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 709 (736)
Q Consensus 632 ~~~~~~y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~r~~~~~--~~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~ 709 (736)
.++. .+++|+|+ ++++++|.++++++|++|+++|+++++.++ .|+++++++|+++|++++++||++||++||
T Consensus 962 ~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~-- 1035 (1079)
T PLN02638 962 EDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ-- 1035 (1079)
T ss_pred cccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence 4431 25899999 999999999999999999999999998755 688999999999999999999999999997
Q ss_pred CCCChhHHHHHHHHHHHHHHhh
Q 004692 710 GRISPSAILLSSVFFVTFLFFG 731 (736)
Q Consensus 710 ~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
+++|+++++||++||++|+++-
T Consensus 1036 ~r~P~~v~v~s~ll~~~~~l~~ 1057 (1079)
T PLN02638 1036 NRTPTIVVVWSILLASIFSLLW 1057 (1079)
T ss_pred CCCCeeehHHHHHHHHHHHHHH
Confidence 7889999999999999999863
No 4
>PLN02195 cellulose synthase A
Probab=100.00 E-value=8.9e-173 Score=1487.69 Aligned_cols=711 Identities=33% Similarity=0.637 Sum_probs=656.0
Q ss_pred CCCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeeccc
Q 004692 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
..+|||+|++.++.+ +.||+++++++++++++|+||+++.. .++.|+|+++++||+||+|+|+++|+.||+|++|
T Consensus 156 ~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 231 (977)
T PLN02195 156 AYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPV----DSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINR 231 (977)
T ss_pred ccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcc----ccchHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 368899999998874 56999999999999999999998843 3456999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHh
Q 004692 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (736)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~f 154 (736)
.+++++|++ ++++|.|||||||+||++|||.++.|||+|+|+.|||.|||+|||+|||++.+|+++|.||++|
T Consensus 232 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 311 (977)
T PLN02195 232 ETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEF 311 (977)
T ss_pred eECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999998863 2569999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------C
Q 004692 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-GE---------------Y 217 (736)
Q Consensus 155 a~~wvpfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~-g~---------------~ 217 (736)
||+||||||||+||||+||+||+.+ ++.+++..|+|++||++||++|||||+|||.+.++ ++ +
T Consensus 312 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g 391 (977)
T PLN02195 312 ARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPG 391 (977)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCC
Confidence 9999999999999999999999988 55567788999999999999999999999988643 11 4
Q ss_pred CCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004692 218 GNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (736)
Q Consensus 218 ~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~ 297 (736)
.+++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++|
T Consensus 392 ~~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n 467 (977)
T PLN02195 392 NNTRDHPGMIQVFLGETGA----RDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVN 467 (977)
T ss_pred CCCCCCcchhhhhccCCCC----cccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccC
Confidence 5788999999999987653 355778899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-Ccc
Q 004692 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 376 (736)
Q Consensus 298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~ 376 (736)
+|++++++||||+||+.++++||||+||+|+|.+++|+|++++++||+++++|+||+|||+|+||||+|||+|||| .|+
T Consensus 468 ~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~ 547 (977)
T PLN02195 468 NSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPP 547 (977)
T ss_pred cHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 543
Q ss_pred cc-------------------ccc--------------------------------------hHhhHhhhcCchhHHhhh
Q 004692 377 HK-------------------GID--------------------------------------LAELKDTFGESNLFIKSL 399 (736)
Q Consensus 377 ~~-------------------~~d--------------------------------------~~~~~~~~~~~~~~~~s~ 399 (736)
.. ..+ ..++..+||+|.+|++|+
T Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~ 627 (977)
T PLN02195 548 SLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIEST 627 (977)
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHH
Confidence 21 000 013456899999999999
Q ss_pred hhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCc
Q 004692 400 HQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 479 (736)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~ 479 (736)
..+..+... ...+.++++||++|+||+||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||+
T Consensus 628 ~~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~ 705 (977)
T PLN02195 628 LMENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPI 705 (977)
T ss_pred HHHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCC
Confidence 887755433 234678999999999999999999999999999999999999999999999999999878899999999
Q ss_pred CHHHHHHhhHHHhcccchhhhhhcCCcccCC--CCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcccccC
Q 004692 480 NLNDVLIQGTRWASGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVS 557 (736)
Q Consensus 480 tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~ 557 (736)
|+.+++.||+|||+|++|++++|+||++++. ++|++.||++|+++++|+ +.++|.++|+++|++||++|++++|.++
T Consensus 706 ~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~vs 784 (977)
T PLN02195 706 NLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPTLS 784 (977)
T ss_pred CHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecccch
Confidence 9999999999999999999999999999763 689999999999999999 9999999999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccchhhhhh
Q 004692 558 SPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKR 637 (736)
Q Consensus 558 ~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~ 637 (736)
.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.+++++++++++++++++++++++|.||+|..++++
T Consensus 785 ~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~--- 861 (977)
T PLN02195 785 NLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTE--- 861 (977)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccc---
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999876432
Q ss_pred ccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChh
Q 004692 638 YEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPS 715 (736)
Q Consensus 638 y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~r~~~~~--~~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p~~ 715 (736)
..++|+|+ ++++++|.++++++|++|+++|+++.+.+| .|+.+++++++++|++++++||++||++|| +|+|++
T Consensus 862 -~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~ 937 (977)
T PLN02195 862 -FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTPTI 937 (977)
T ss_pred -hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCee
Confidence 13678998 999999999999999999999999998755 688999999999999999999999999997 888999
Q ss_pred HHHHHHHHHHHHHHhh
Q 004692 716 AILLSSVFFVTFLFFG 731 (736)
Q Consensus 716 ~~~~~~~~~~~~~~~~ 731 (736)
+++||++||++|+++-
T Consensus 938 v~v~s~ll~~~~~l~~ 953 (977)
T PLN02195 938 VVLWSVLLASVFSLVW 953 (977)
T ss_pred ehHHHHHHHHHHHHHH
Confidence 9999999999999863
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=1e-172 Score=1493.75 Aligned_cols=711 Identities=33% Similarity=0.649 Sum_probs=656.1
Q ss_pred CCCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeeccc
Q 004692 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
+.+|||++++.++.. +.||+++++++++++++|+||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 235 ~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 235 ARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPV----HDAIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcC----ccchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 478899999998874 56999999999999999999999843 2358999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHh
Q 004692 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (736)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~f 154 (736)
.+++++|.+ ++++|.|||||||+||++|||.++.|||+|+|+.|||.|||+|||+|||++.+|+++|.||++|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998863 2349999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004692 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (736)
Q Consensus 155 a~~wvpfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~-------~g~---------~ 217 (736)
||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+.+ .|+ +
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g 470 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPG 470 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCC
Confidence 9999999999999999999999988 5567888899999999999999999999998741 112 4
Q ss_pred CCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004692 218 GNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (736)
Q Consensus 218 ~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~ 297 (736)
.+++|||+||||+.+++++. |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+|+||||++|
T Consensus 471 ~~~~dHp~IiQVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~N 546 (1040)
T PLN02189 471 NNTRDHPGMIQVFLGHSGGH----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYIN 546 (1040)
T ss_pred CCCCCCHHHHHHHhcCCCCc----cccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccC
Confidence 57899999999999987642 45678899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-Ccc
Q 004692 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 376 (736)
Q Consensus 298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~ 376 (736)
||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|+
T Consensus 547 ns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~ 626 (1040)
T PLN02189 547 NSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPP 626 (1040)
T ss_pred chHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 453
Q ss_pred cc-------------------cc------------------------chHhhHhhhcCchhHHhhhhhhccccccCCccc
Q 004692 377 HK-------------------GI------------------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 413 (736)
Q Consensus 377 ~~-------------------~~------------------------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
.. .. ...++.++||+|.+|++|+..+..+. +....
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~~ 704 (1040)
T PLN02189 627 KGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGV--PPSSS 704 (1040)
T ss_pred cccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCC--CCCCC
Confidence 11 00 01244568999999999998875332 23345
Q ss_pred hhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhc
Q 004692 414 SNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWAS 493 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~ 493 (736)
+.++++||++|+||+||++|+||+++||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++
T Consensus 705 ~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~ 784 (1040)
T PLN02189 705 PAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWAL 784 (1040)
T ss_pred cHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhh
Confidence 67899999999999999999999999999999999999999999999999999987899999999999999999999999
Q ss_pred ccchhhhhhcCCcccCC--CCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcccccChhhHHHHHHHHHHH
Q 004692 494 GLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSA 571 (736)
Q Consensus 494 G~~qi~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~ 571 (736)
|++||+++|+||++++. ++|++.||++|+++++|| +.++|.++|+++|++||++|++++|.++.+++++|+++++++
T Consensus 785 G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~ 863 (1040)
T PLN02189 785 GSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSI 863 (1040)
T ss_pred hhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHH
Confidence 99999999999999763 679999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccchhhhhhccccceeeeccchh
Q 004692 572 ICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVF 651 (736)
Q Consensus 572 ~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s~~ 651 (736)
+++.++|++|+|.+.++|||+||+|+|.++++++++++++++++|++++++|.||+|..+.++. ++.|+|+ ++++
T Consensus 864 ~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~~----~~ly~f~-~s~l 938 (1040)
T PLN02189 864 FATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDEF----GELYAFK-WTTL 938 (1040)
T ss_pred HHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccccc----ccceeec-ceeH
Confidence 9999999999999999999999999999999999999999999999999999999998765431 4889999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhHHHHHHHHHHHHHH
Q 004692 652 LVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLF 729 (736)
Q Consensus 652 ~~P~~~l~ll~l~aiv~gi~r~~~~~--~~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~ 729 (736)
++|.++++++|++|+++|+++++.++ .|+++++++++++|++++++||++||++|| +++|+++++||++||++|++
T Consensus 939 ~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l 1016 (1040)
T PLN02189 939 LIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFSL 1016 (1040)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHH
Confidence 99999999999999999999998755 688999999999999999999999999997 88899999999999999998
Q ss_pred hh
Q 004692 730 FG 731 (736)
Q Consensus 730 ~~ 731 (736)
+-
T Consensus 1017 ~~ 1018 (1040)
T PLN02189 1017 LW 1018 (1040)
T ss_pred HH
Confidence 63
No 6
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=1.3e-171 Score=1484.97 Aligned_cols=712 Identities=33% Similarity=0.634 Sum_probs=654.7
Q ss_pred CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeecccc
Q 004692 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (736)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (736)
.+|||++++.++.+ +.||+++++++++++++|+||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 192 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 267 (1044)
T PLN02915 192 RQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRE 267 (1044)
T ss_pred CCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 68899999998874 569999999999999999999998 3445689999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhh
Q 004692 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (736)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa 155 (736)
+++++|++ ++++|.|||||+|+||++|||.++.|||+|+||.|||.|||+|||+|||++.+|+++|.||++||
T Consensus 268 t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 347 (1044)
T PLN02915 268 TYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFA 347 (1044)
T ss_pred cCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHH
Confidence 99998863 23599999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcCCccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------CC
Q 004692 156 KWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------YG 218 (736)
Q Consensus 156 ~~wvpfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~-------g~---------~~ 218 (736)
|+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+.++ |+ +.
T Consensus 348 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~ 427 (1044)
T PLN02915 348 RRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGN 427 (1044)
T ss_pred HhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCC
Confidence 999999999999999999999988 55677878999999999999999999999987643 21 34
Q ss_pred CCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004692 219 NSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (736)
Q Consensus 219 ~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~ 298 (736)
..+|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+.+|+|++|||+|||+|+||||++||
T Consensus 428 ~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nn 503 (1044)
T PLN02915 428 NTRDHPGMIQVYLGSEGA----LDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINN 503 (1044)
T ss_pred CCCCCccceEEeecCCCC----cccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCc
Confidence 568999999999998664 3557788999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-Cccc
Q 004692 299 PTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKH 377 (736)
Q Consensus 299 p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~ 377 (736)
|++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+.
T Consensus 504 s~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~ 583 (1044)
T PLN02915 504 SKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPV 583 (1044)
T ss_pred chhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 5542
Q ss_pred cc--------------------------------c---------------------------------------------
Q 004692 378 KG--------------------------------I--------------------------------------------- 380 (736)
Q Consensus 378 ~~--------------------------------~--------------------------------------------- 380 (736)
.+ .
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1044)
T PLN02915 584 SEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEG 663 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00 0
Q ss_pred -------------chHhhHhhhcCchhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCcc
Q 004692 381 -------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVS 447 (736)
Q Consensus 381 -------------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sit 447 (736)
....+.++||+|.+|++|+..+.++ .+....++++++||++|+||+||++|+||+++||.|+|+|
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvT 741 (1044)
T PLN02915 664 LEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGG--LPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVT 741 (1044)
T ss_pred cccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcC--CCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccc
Confidence 0113456899999999999886543 3334467889999999999999999999999999999999
Q ss_pred chHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhcccchhhhhhcCCcccC-CCCCchhHHHHHHHHhH
Q 004692 448 EDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSL 526 (736)
Q Consensus 448 ED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~ 526 (736)
||+.||++||++||||+|++|++++|.|+||+|+.++++||+|||+|++||+++|+||++++ .++|++.||++|+++++
T Consensus 742 EDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~ 821 (1044)
T PLN02915 742 EDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIV 821 (1044)
T ss_pred cHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999998878899999999999999999999999999999999999975 37999999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHhcCCCcccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHH
Q 004692 527 FPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFY 606 (736)
Q Consensus 527 ~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~ 606 (736)
|| +.++|.++|+++|++||++|++++|.++..+..+|++++++++++.++|++|+|.++++||++||+|+|.+++++++
T Consensus 822 yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lf 900 (1044)
T PLN02915 822 YP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLF 900 (1044)
T ss_pred HH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHH
Confidence 99 99999999999999999999999998877777777888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcceeeccCccchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHHhhc--CCchHHHH
Q 004692 607 GSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV--GNWDKLFA 684 (736)
Q Consensus 607 ~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~r~~~~--~~~~~~~~ 684 (736)
+++++++++|++++++|+||+|+.+.++++. ++.|+|+ ++++++|+++++++|++|+++|+++++.. +.|+.+++
T Consensus 901 avl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~ 977 (1044)
T PLN02915 901 AVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFG 977 (1044)
T ss_pred HHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 9999999999999999999999876543322 4889998 99999999999999999999999998864 46788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCChhHHHHHHHHHHHHHHhh
Q 004692 685 QVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFG 731 (736)
Q Consensus 685 ~~~~~~~~v~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
+++.++|++++++||++||++|+ +|+|+++++||++||++|+++-
T Consensus 978 ~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~ 1022 (1044)
T PLN02915 978 KLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVW 1022 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHH
Confidence 99999999999999999999997 7889999999999999999863
No 7
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.2e-171 Score=1452.70 Aligned_cols=704 Identities=33% Similarity=0.594 Sum_probs=643.2
Q ss_pred CCCCCCceEeeecCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeecc
Q 004692 1 MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVS 80 (736)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 80 (736)
|.+++||||+++.+++ ++|++.+++++++++|+.||+++.++. .+.|+++++||+|++++|+++|+.+|+|++
T Consensus 5 ~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~ 77 (756)
T PLN02190 5 SSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-----DTVWLVAFLCESCFSFVWLLITCIKWSPAE 77 (756)
T ss_pred cCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-----cHHHHHHHHHHHHHHHHHHHhccceeeecC
Confidence 3468899999999888 699999999999999999999997653 257899999999999999999999999999
Q ss_pred ccCCCCCCCC-CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhh
Q 004692 81 RTVFPERLPE-DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWL 159 (736)
Q Consensus 81 r~~~~~~l~~-~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wv 159 (736)
|.++|++|++ -+++|+|||||||+||++|||++++||++|++++|||.|||+|||+|||+++.|+++|.||++|||+||
T Consensus 78 r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 78 YKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 9999999875 246999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC-----CCCCCCCcccE
Q 004692 160 PFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE-----YGNSQNHSTII 227 (736)
Q Consensus 160 pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~-------~g~-----~~~~~~h~~~i 227 (736)
||||||+||||+||+||+... +...+++|++||++||++|||||+|||++.+ ++. +++++|||+||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~--~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~ii 235 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPP--VATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIV 235 (756)
T ss_pred ccccccCCCcCCHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccce
Confidence 999999999999999999742 2234579999999999999999999999842 111 57899999999
Q ss_pred EEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004692 228 EIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 228 ~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~ 307 (736)
||++|++++ +.++.++|+++||+|||||+++||+||||||+++|+|++|||+|||+|+||||++|||++++++||
T Consensus 236 qVll~~~~~-----~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmC 310 (756)
T PLN02190 236 KVVWENKGG-----VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMC 310 (756)
T ss_pred EEEecCCCC-----ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhh
Confidence 999998654 235779999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCC-CceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-Ccccccc-----
Q 004692 308 FHLDPKTS-SSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKGI----- 380 (736)
Q Consensus 308 ~f~D~~~~-~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~~----- 380 (736)
||+|++.+ +++||||+||+|+ |+|+|++++||++.+.|+||+|||+|+||||+|||+|||| +|+....
T Consensus 311 f~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~ 385 (756)
T PLN02190 311 IFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLS 385 (756)
T ss_pred hhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccccccc
Confidence 99998754 4899999999998 7899999999999999999999999999999999999999 6653211
Q ss_pred --------chHhhHhhhcCchhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHH
Q 004692 381 --------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFT 452 (736)
Q Consensus 381 --------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t 452 (736)
+..+..++||+|++|++|+..+.++...+ ...+.++++||++|+||+||++|+||+++||.|+|+|||+.|
T Consensus 386 ~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~-~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 386 SVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNP-QNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred ccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCC-ccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 12335589999999999998877544432 233568999999999999999999999999999999999999
Q ss_pred HHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhcccchhhhhhcCCcccC-CCCCchhHHHHHHHHhHhhHHh
Q 004692 453 GFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLY 531 (736)
Q Consensus 453 ~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~ 531 (736)
|++||++||||+||+++++++.|++|+++.+.+.||+||++|++|++++|+||++.+ .++|++.||++|++..+ | ++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~ 542 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LR 542 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HH
Confidence 999999999999999888999999999999999999999999999999999999975 57999999999999877 7 99
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHH
Q 004692 532 CLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDA 611 (736)
Q Consensus 532 ~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~a 611 (736)
++|+++|+++|++||++|.+++|+. +++++++++++++++++++|++|+|+++++|||+||+|+|.++++++++++++
T Consensus 543 sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~ 620 (756)
T PLN02190 543 SIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDI 620 (756)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHH
Confidence 9999999999999999999999964 68888888899999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceeeccCccc-------------hhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHHhhc--
Q 004692 612 IMKLLGLRKASFLPTNKVLD-------------NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV-- 676 (736)
Q Consensus 612 l~~~l~~~~~~F~VT~K~~~-------------~~~~~~y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~r~~~~-- 676 (736)
++|+||++++.|+||.|..+ .+++++|++|+|+|+ ++++++|.++++++|++|++.|+++++..
T Consensus 621 ~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~ 699 (756)
T PLN02190 621 ILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSY 699 (756)
T ss_pred HHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999754 334578899999999 99999999999999999999999987642
Q ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhHHHHHHHHHHHHHHhh
Q 004692 677 ---GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFG 731 (736)
Q Consensus 677 ---~~~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
+.++.+ ++++.|+|+|++++||++||+ |||||+||+|++++|++||++|++|+
T Consensus 700 s~~~~~~~l-~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 700 SHGGGGSGL-AEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred ccCcccccH-HHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 345554 999999999999999999998 99999999999999999999999986
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=9.8e-171 Score=1478.75 Aligned_cols=716 Identities=31% Similarity=0.582 Sum_probs=646.2
Q ss_pred CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeecccc
Q 004692 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (736)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (736)
.+|||+|++.++.+ +.||+++++++++++++|+||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 57899999998874 469999999999999999999998 3445689999999999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHH
Q 004692 83 VFPERLPE------------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMRE 150 (736)
Q Consensus 83 ~~~~~l~~------------~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e 150 (736)
+++++|.+ ++++|.||||||||||++|||.++.|||+|+|+.|||.|||.|||+|||++.+|+|+|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99987753 236999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhcCCccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc---------------
Q 004692 151 ACRFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED--------------- 214 (736)
Q Consensus 151 ~~~fa~~wvpfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~--------------- 214 (736)
|++|||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+.+.
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 99999999999999999999999999988 55567778999999999999999999999987320
Q ss_pred ---------------------------CC-----------CCCCCCCcccEEEeecCCCcch----------hhhhcccc
Q 004692 215 ---------------------------GE-----------YGNSQNHSTIIEIIQDTSGENE----------TIRQADLV 246 (736)
Q Consensus 215 ---------------------------g~-----------~~~~~~h~~~i~v~~~~~~~~~----------~~~~~~~~ 246 (736)
|. +++++|||+||||++++++..+ ...+..+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 00 3578899999999998765211 11223445
Q ss_pred CcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCce
Q 004692 247 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQK 326 (736)
Q Consensus 247 ~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~ 326 (736)
++|+|+||+||||||++||+||||||+.+|+|++|||||||+|+||||++|||++++++||||+||+ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999997 899999999999
Q ss_pred eccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-Cccccc--------------------------
Q 004692 327 FHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG-------------------------- 379 (736)
Q Consensus 327 f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~-------------------------- 379 (736)
|+|.+++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|+...
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999 554320
Q ss_pred ---------cchHhhHhhhcCchhHHhhhhhhcc-cccc-----------------CCccchhhHHhhccccccceeecc
Q 004692 380 ---------IDLAELKDTFGESNLFIKSLHQSYE-HKNV-----------------NGENLSNVLQQETEVLASCSYEHQ 432 (736)
Q Consensus 380 ---------~d~~~~~~~~~~~~~~~~s~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~v~~c~ye~~ 432 (736)
.+...+.++||+|.+|++|+..+.. +... +....+.++++||++|+||+||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 0011234589999999999976652 1111 123346789999999999999999
Q ss_pred ccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhcccchhhhhhcCCcccCCCC
Q 004692 433 TKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSR 512 (736)
Q Consensus 433 t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~ 512 (736)
|+||+++||.|+|+|||+.||++||++||||+||++++++|.|++|+|+.++++||+|||+|++||+++|++|++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999999875 69
Q ss_pred CchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcccccChhhHHHH-HHHHHHHHHHHHHHHHHhCCccccccc
Q 004692 513 MSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVF-SFIFLSAICKHLQEVISTGGSVYTWRN 591 (736)
Q Consensus 513 l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~-~~l~i~~~~~~ll~~~~~g~~~~~ww~ 591 (736)
|++.||++|+++++|| +.+++.++|+++|++||++|++++|+.+ ++++++ +.++++++.+.++|++|+|.++++||+
T Consensus 901 Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~~~-~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWr 978 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQTLN-VTFLVYLLIITITLCLLAVLEIKWSGITLEEWWR 978 (1135)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCccccccc-HHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhh
Confidence 9999999999999999 9999999999999999999999999864 444444 466788889999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHH
Q 004692 592 EQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVI 671 (736)
Q Consensus 592 ~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~ 671 (736)
+||+|+|.+++++++++++++++++++++.+|+||+|..+.+.+++| ++.|+|+ ++++++|+++++++|++|+++|++
T Consensus 979 nQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~ 1056 (1135)
T PLN02248 979 NEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVS 1056 (1135)
T ss_pred hhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877666677 5899998 899999999999999999999999
Q ss_pred HHhhc--CCchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhHHHHHHHHHHHHHHhh
Q 004692 672 RMIAV--GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFG 731 (736)
Q Consensus 672 r~~~~--~~~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
|++.+ +.|+.+++++++++|++++++||++||++| |+++|+++++||++|+++++++-
T Consensus 1057 R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll~ 1116 (1135)
T PLN02248 1057 RTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLLW 1116 (1135)
T ss_pred HHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHHh
Confidence 99864 356788999999999999999999999998 88889999999999999999863
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=1.1e-169 Score=1445.10 Aligned_cols=702 Identities=40% Similarity=0.771 Sum_probs=646.1
Q ss_pred CCCCCceEeeecCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeeccc
Q 004692 2 DSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
.+.+||||+++.+++ .++|+++++++++++++++||+++.... ...|.|+++++||+||+|+|+++|+.||+|++|
T Consensus 9 ~~~~pL~~~~~~~~~-~~~R~~~~~~~~~i~~ll~~r~~~~~~~---~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHS---TTTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeecCCc-hHHHHHHHHHHHHHHHHHHHHhcccccc---cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 357899999998886 3699999999999999999999987643 236899999999999999999999999999999
Q ss_pred cCCCCCCCC---CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhh
Q 004692 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWW 158 (736)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~w 158 (736)
.+++++|++ ++++|.|||||||+||++|||.++.|||+|+|+.|||.||++|||+|||+++.|+++|.||++|||+|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999974 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCC--------------------CC
Q 004692 159 LPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGE--------------------YG 218 (736)
Q Consensus 159 vpfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~--------------------~~ 218 (736)
|||||||+|||||||+||+.+ .+++.+||+.||++|||||+|||.+.+.|. ++
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~-------~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSN-------SHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccC-------CCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 999999999999999999876 245678999999999999999999853332 46
Q ss_pred CCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004692 219 NSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (736)
Q Consensus 219 ~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~ 298 (736)
+++|||+||||++|++++ .|.++.++|+++|++||||||++||+||||||+++|+|+++||||||+++||||++||
T Consensus 238 ~~~dH~~ivqV~l~~~~~----~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKD----KDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred CCCCCCceeeeeccCCCc----cchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 789999999999998754 2456778999999999999999999999999999999999999999999999999989
Q ss_pred hHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCcccc
Q 004692 299 PTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHK 378 (736)
Q Consensus 299 p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~ 378 (736)
|++++++||||+||+.++++|+||+||+|+|.+++|+|+|++++||+++++|+||+||++||||||+|||+||+|.++..
T Consensus 314 p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~ 393 (734)
T PLN02893 314 PQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSL 393 (734)
T ss_pred hhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccc
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999954311
Q ss_pred ccchHhhHhhhcCchhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHH
Q 004692 379 GIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC 458 (736)
Q Consensus 379 ~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~ 458 (736)
..+ ...+++++... .....+++++++|++|+||.||++|.||+++||.|+|+|||++||++||+
T Consensus 394 ~~~---~~~~~~~~~~~-------------~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~ 457 (734)
T PLN02893 394 ILP---EIPELNPDHLV-------------DKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQC 457 (734)
T ss_pred cch---hhhhccccccc-------------ccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHh
Confidence 000 01111111110 11123577999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhcccchhhhhhcCCcccCCCCCchhHHHHHHHHhHhhHHhHHHHHHH
Q 004692 459 KGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCF 538 (736)
Q Consensus 459 ~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~ 538 (736)
+||||+|++++++++.|++|+|+.++++||+||++|++|++++|+||++++.++|++.||++|++.++|+ ++++|.++|
T Consensus 458 ~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY 536 (734)
T PLN02893 458 EGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIY 536 (734)
T ss_pred cCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHH
Confidence 9999999998778999999999999999999999999999999999999877899999999999999999 999999999
Q ss_pred HHHHHHHHhcCCCcccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Q 004692 539 ATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGL 618 (736)
Q Consensus 539 ~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~ 618 (736)
+++|++||++|++++|+.+.+|+++++++++++++++++|++|+|.++++|||+||+|++.+++++++++++++++++|+
T Consensus 537 ~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~ 616 (734)
T PLN02893 537 AFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGI 616 (734)
T ss_pred HHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeccCccchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHH
Q 004692 619 RKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFA 698 (736)
Q Consensus 619 ~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~r~~~~~~~~~~~~~~~~~~~~v~~l~p 698 (736)
++.+|+||+|+.+.++.++|++|.|+|+.++++++|+++++++|++|+++|+++++.++.+++++++++|++|++++++|
T Consensus 617 s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P 696 (734)
T PLN02893 617 STFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWP 696 (734)
T ss_pred cCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999887777899999999997799999999999999999999999998877788889999999999999999
Q ss_pred HHHHHHhccCCCCCChhHHHHHHHHHHHHHHhhhccc
Q 004692 699 IVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL 735 (736)
Q Consensus 699 ~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
|++|+++|||||+||+++++||++||++++...++++
T Consensus 697 ~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~ 733 (734)
T PLN02893 697 IYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAF 733 (734)
T ss_pred HHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999988764
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.7e-159 Score=1347.96 Aligned_cols=623 Identities=43% Similarity=0.801 Sum_probs=581.7
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccc
Q 004692 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (736)
Q Consensus 97 VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf 176 (736)
|||||||+||++|||.++.|||+|+|++|||.|||+|||+|||+++.|+++|.||++|||+||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------CCCCCCCcccEEEeecCCCcchh
Q 004692 177 SEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------YGNSQNHSTIIEIIQDTSGENET 239 (736)
Q Consensus 177 ~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~-------~g~---------~~~~~~h~~~i~v~~~~~~~~~~ 239 (736)
+.+ +..+++.+++|++||++||++|||||+|||.+.+ .++ +++++|||+||||+++++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~-- 158 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK-- 158 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc--
Confidence 998 7778888999999999999999999999998743 222 567899999999999987653
Q ss_pred hhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceE
Q 004692 240 IRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLA 319 (736)
Q Consensus 240 ~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg 319 (736)
|.++.++|+|+|++|||||+++||+||||||+++|+|++|||||||+++||||++|||++++++||||+||+.++++|
T Consensus 159 --~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~ 236 (720)
T PF03552_consen 159 --DVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIA 236 (720)
T ss_pred --ccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeE
Confidence 667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-Ccccccc------------------
Q 004692 320 FVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKGI------------------ 380 (736)
Q Consensus 320 ~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~~------------------ 380 (736)
|||+||+|+|.+++|+|+|++.+||+++++|+||+|||+|+||||+|||+|||| .|+....
T Consensus 237 ~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~ 316 (720)
T PF03552_consen 237 FVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKK 316 (720)
T ss_pred EEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccc
Confidence 999999999999999999999999999999999999999999999999999999 6553100
Q ss_pred ------------------------------------------chHhhHhhhcCchhHHhhhhhhccccccCCccchhhHH
Q 004692 381 ------------------------------------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (736)
Q Consensus 381 ------------------------------------------d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
+.++++++||+|++|++|+..+.++ .+......+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~--~~~~~~~~~~L 394 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGG--VPRSPSPASLL 394 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcC--CCCCCChHHHH
Confidence 0145668999999999999865532 33445578999
Q ss_pred hhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhcccchh
Q 004692 419 QETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDV 498 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qi 498 (736)
+||++|+||+||++|+||+++||.|+|+|||+.||++||++||||+||+|++++|.|.||+|+.+.+.|++|||.|.+||
T Consensus 395 ~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI 474 (720)
T PF03552_consen 395 EEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEI 474 (720)
T ss_pred HHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCcccC-CCCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcccccChhhHHHHHHHHHHHHHHHHH
Q 004692 499 SISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQ 577 (736)
Q Consensus 499 ~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~~~~ll 577 (736)
++||+||++++ .++|++.||++|++.++|+ ++++|.++|+++|++||++|++++|+++.+++++|+++|+++++++++
T Consensus 475 ~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~ll 553 (720)
T PF03552_consen 475 FFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLL 553 (720)
T ss_pred ehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHH
Confidence 99999999987 5799999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccchhhhhhccccceeeeccchhHHHHHH
Q 004692 578 EVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVS 657 (736)
Q Consensus 578 ~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s~~~~P~~~ 657 (736)
|++|+|+++++|||+||+|+|.+++++++++++++++++|+++.+|.||+|..++++++.+ +.|+|+ ++++++|.++
T Consensus 554 E~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~tT 630 (720)
T PF03552_consen 554 EFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPTT 630 (720)
T ss_pred HHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHHH
Confidence 9999999999999999999999999999999999999999999999999999874443333 578887 7899999999
Q ss_pred HHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhHHHHHHHHHHHHHHhh
Q 004692 658 LMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFG 731 (736)
Q Consensus 658 l~ll~l~aiv~gi~r~~~~~--~~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
++++|++|+++|+++.+..+ +|+++++++|+++|++++++||++||++||+ ++|+++++||++||++|+++-
T Consensus 631 llilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llw 704 (720)
T PF03552_consen 631 LLILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLW 704 (720)
T ss_pred HHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHh
Confidence 99999999999999988754 6889999999999999999999999999976 599999999999999999863
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-73 Score=672.31 Aligned_cols=487 Identities=25% Similarity=0.346 Sum_probs=394.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeeccccCCCCCCCC-CCCCCceEEE
Q 004692 22 LHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPAIDVF 100 (736)
Q Consensus 22 ~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~VdV~ 100 (736)
+++++.+++.+.|++||++.|+|..+..+.+++++++++|+++.+..+++.+..++|..|++. +++. .+.+|+|||+
T Consensus 188 ~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--~~~~~~~~~P~VsVi 265 (852)
T PRK11498 188 MLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--PLPKDMSLWPTVDIF 265 (852)
T ss_pred HHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCCcccCCCCcEEEE
Confidence 345566666889999999999997666677888999999999988888888888888877632 3333 4578999999
Q ss_pred EecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccccccCC
Q 004692 101 ICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEAD 180 (736)
Q Consensus 101 Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~~~ 180 (736)
||| |||+.+++++|+.+++++|||++|++|||+|||++|.|. + +|+++
T Consensus 266 IPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~-------~-------la~~~--------------- 313 (852)
T PRK11498 266 VPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFR-------Q-------FAQEV--------------- 313 (852)
T ss_pred Eec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHH-------H-------HHHHC---------------
Confidence 999 999988999999999999999999999999999998432 1 11111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCC
Q 004692 181 SDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSP 260 (736)
Q Consensus 181 ~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p 260 (736)
++.|+.|+++
T Consensus 314 ---------------------------------------------------------------------~v~yI~R~~n- 323 (852)
T PRK11498 314 ---------------------------------------------------------------------GVKYIARPTH- 323 (852)
T ss_pred ---------------------------------------------------------------------CcEEEEeCCC-
Confidence 2578888764
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCCC------
Q 004692 261 EHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEH------ 333 (736)
Q Consensus 261 ~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq~f~n~~~~------ 333 (736)
.|+||||+|+|+++ ++||||+++|||++ ++||+|++++++| .||+ +|+||+||.|+|.+.-
T Consensus 324 ---~~gKAGnLN~aL~~----a~GEyIavlDAD~i-p~pdfL~~~V~~f~~dP~----VglVQtp~~f~n~dp~~rnl~~ 391 (852)
T PRK11498 324 ---EHAKAGNINNALKY----AKGEFVAIFDCDHV-PTRSFLQMTMGWFLKDKK----LAMMQTPHHFFSPDPFERNLGR 391 (852)
T ss_pred ---CcchHHHHHHHHHh----CCCCEEEEECCCCC-CChHHHHHHHHHHHhCCC----eEEEEcceeccCCchHHHhhHH
Confidence 67999999999999 89999999999998 4699999999876 5776 9999999999985321
Q ss_pred -chhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCcc
Q 004692 334 -DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 412 (736)
Q Consensus 334 -d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 412 (736)
....++.+.||+.++.|.|.+++.++||+++++||+++.
T Consensus 392 ~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe---------------------------------------- 431 (852)
T PRK11498 392 FRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD---------------------------------------- 431 (852)
T ss_pred HhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH----------------------------------------
Confidence 012345568899999999999999999999999999992
Q ss_pred chhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHh
Q 004692 413 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (736)
Q Consensus 413 ~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa 492 (736)
+.|||+++++|||+++++++|++||+++|+++ +.+.|++|+|++++++||.||+
T Consensus 432 ------------------------eVGGfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWa 485 (852)
T PRK11498 432 ------------------------EIGGIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWA 485 (852)
T ss_pred ------------------------HhcCCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHH
Confidence 24789999999999999999999999999986 7889999999999999999999
Q ss_pred cccchhhhhhcCCcccCCCCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcccccChhhHHHHHHHHHHHH
Q 004692 493 SGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAI 572 (736)
Q Consensus 493 ~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~~~ 572 (736)
+|++|+++ +++|++. +++++.||++|+++++|+ +.++|.++|+++|++|+++|+.++.+ ++..++++ +++++
T Consensus 486 rG~lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a---~~~~i~~y-~lP~~ 557 (852)
T PRK11498 486 RGMVQIFR-LDNPLTG--KGLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYA---PALMIALF-VLPHM 557 (852)
T ss_pred HHHHHHHH-HhChhcc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeC---ChHHHHHH-HHHHH
Confidence 99999997 5789874 799999999999999998 99999999999999999999988743 22222222 23333
Q ss_pred HHHHH-HHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccchhhhhhccccceeeeccchh
Q 004692 573 CKHLQ-EVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVF 651 (736)
Q Consensus 573 ~~~ll-~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s~~ 651 (736)
....+ ....+|.....||+| ++.++ .+++....++..++++++.+|+|||||+..++ +.|+|+ +
T Consensus 558 ~~~~l~~~~~~g~~r~~~wse----iye~v-~a~~l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~~~~~----~ 622 (852)
T PRK11498 558 IHASLTNSRIQGKYRHSFWSE----IYETV-LAWYIAPPTTVALFNPHKGKFNVTAKGGLVEE------EYVDWV----I 622 (852)
T ss_pred HHHHHHHHHhcCcchHhHHHH----HHHHH-HHHHHHHHHHHHHcCccCCCcccCCCCccccc------cceehH----H
Confidence 32222 223356566678877 34444 44555566677789999999999999986554 667764 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004692 652 LVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 713 (736)
Q Consensus 652 ~~P~~~l~ll~l~aiv~gi~r~~~~~--~~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p 713 (736)
..|+++++++|++|+++|++++..+. ....+.+|++|++|+++++...+.+..-++..++-|
T Consensus 623 ~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 623 SRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVRRSH 686 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 77999999999999999999987643 224567999999999999888887777665544444
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=6.7e-73 Score=669.36 Aligned_cols=508 Identities=27% Similarity=0.343 Sum_probs=406.8
Q ss_pred HHHHHHHHHH-HHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeeccccCCCCCCCCCCCCCceE
Q 004692 20 NRLHALLHCI-AIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID 98 (736)
Q Consensus 20 ~r~~~~~~~~-~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~Vd 98 (736)
.|++.++..+ +.+.|++||++.|+|........++++++++|++..+..+++.+..++|.+|+..+.+ .+++.+|+||
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~Vs 134 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTVD 134 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCeeE
Confidence 4665554444 4678999999999997666667788999999999988888888888888877643322 1256789999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+++++++|+.+++++|||+||++|+|+||||+|.|....-+.++
T Consensus 135 ViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------- 186 (713)
T TIGR03030 135 VFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------- 186 (713)
T ss_pred EEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh-------------------------
Confidence 99999 99998899999999999999999999999999999987532211110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+..+++.++++..++ .++.|+.|++
T Consensus 187 ----------~~~~~~~~~~~l~~~---------------------------------------------~~v~yi~r~~ 211 (713)
T TIGR03030 187 ----------EAAQRREELKEFCRK---------------------------------------------LGVNYITRPR 211 (713)
T ss_pred ----------hhhhhHHHHHHHHHH---------------------------------------------cCcEEEECCC
Confidence 000011112111111 1368999887
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCCC----
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEH---- 333 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n~~~~---- 333 (736)
+ +|+||||||+|+++ ++||+|+++|||+++ +||+|++++++|. ||+ +|+||+||.|+|.+.-
T Consensus 212 n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~-~pd~L~~~v~~f~~dp~----v~~Vqtp~~f~~p~~~~~nl 278 (713)
T TIGR03030 212 N----VHAKAGNINNALKH----TDGELILIFDADHVP-TRDFLQRTVGWFVEDPK----LFLVQTPHFFVSPDPIERNL 278 (713)
T ss_pred C----CCCChHHHHHHHHh----cCCCEEEEECCCCCc-ChhHHHHHHHHHHhCCC----EEEEeCCeeccCCCHHhhhh
Confidence 5 68999999999999 899999999999985 5999999999994 666 9999999999886421
Q ss_pred ---chhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCC
Q 004692 334 ---DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (736)
Q Consensus 334 ---d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 410 (736)
+.+.++.+.||..++.|.|.++++++||+|+++||+++.
T Consensus 279 ~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~-------------------------------------- 320 (713)
T TIGR03030 279 GTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALD-------------------------------------- 320 (713)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHH--------------------------------------
Confidence 223456678899999999999999999999999999992
Q ss_pred ccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHH
Q 004692 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~R 490 (736)
+.|||++++++||++++++||++||+++|+++ +.+.|++|+|++++++||.|
T Consensus 321 --------------------------~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl~~~~~Qr~R 372 (713)
T TIGR03030 321 --------------------------EIGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETLSGHIGQRIR 372 (713)
T ss_pred --------------------------HcCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCHHHHHHHHHH
Confidence 24789999999999999999999999999986 68899999999999999999
Q ss_pred HhcccchhhhhhcCCcccCCCCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcccccChhhHHHHHHHHHH
Q 004692 491 WASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLS 570 (736)
Q Consensus 491 Wa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i~ 570 (736)
|++|++|+++ ..+|++. +++++.||++|+++++|+ +.+++.++|+++|++++++|++++++.... +++ .+++
T Consensus 373 Wa~G~~qi~~-~~~pl~~--~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~---~~~-~~lp 444 (713)
T TIGR03030 373 WAQGMMQIFR-LDNPLLK--RGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVASALE---ILA-YALP 444 (713)
T ss_pred HhcChHHHHh-hhCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCCHHH---HHH-HHHH
Confidence 9999999997 4589874 799999999999999999 899999999999999999999998753222 222 2344
Q ss_pred HHHHHHHHHH-HhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccchhhhhhccccceeeeccc
Q 004692 571 AICKHLQEVI-STGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSS 649 (736)
Q Consensus 571 ~~~~~ll~~~-~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s 649 (736)
+++.+++.+. ..|.....||++ ++.++ ..++.+..++.+++++++.+|+|||||+..++ +. .+
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~------~~-----~~ 508 (713)
T TIGR03030 445 HMLHSLLTNSYLFGRVRWPFWSE----VYETV-LAVYLLPPVLVTLLNPKKPKFNVTPKGELLDE------DY-----FS 508 (713)
T ss_pred HHHHHHHHHHHHcCCeecchHHH----HHHHH-HHHHHHHHHHHHHhCcCCCCceecCCCccccc------cc-----cc
Confidence 4555555543 356667789988 34433 66677888888899999999999999986543 11 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCh
Q 004692 650 VFLVPMVSLMILNVAALVCGVIRMIAVGN-WDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISP 714 (736)
Q Consensus 650 ~~~~P~~~l~ll~l~aiv~gi~r~~~~~~-~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p~ 714 (736)
+++.|++++++++++|+++|++|+..... ...+.+|++|++|+++++...+.+.+-|+.+++-|.
T Consensus 509 ~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~R 574 (713)
T TIGR03030 509 PLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPR 574 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCccc
Confidence 78999999999999999999999875332 356789999999999999998888888877776553
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=6.2e-39 Score=374.76 Aligned_cols=343 Identities=16% Similarity=0.157 Sum_probs=243.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCch--hH---HHHHHHHHHHHHHHHHHHHHhhhheeeccccCC----CC-CC
Q 004692 19 INRLHALLHCIAIGFLIYYRASYLLQETRAI--PI---ILWLLVFASELLLSFIWLLGRAYLWRPVSRTVF----PE-RL 88 (736)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~--~~---~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~----~~-~l 88 (736)
+.|++.++..++...|..|+...+++..... .. .+..+++..+.+....-+++.+...+ .|+.. +. .-
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 5788888888888999999999988763311 11 12233444555544444455443322 12111 10 00
Q ss_pred CCCCCCCceEEEEecCCCCCCchHH----HHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhh
Q 004692 89 PEDDKLPAIDVFICTADPEKEPAIG----VMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRR 164 (736)
Q Consensus 89 ~~~~~~P~VdV~Ipt~~p~nE~~~~----v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~ 164 (736)
+.....|+|+|+||+ |||+++. ++.|++|+.+++||. +++++|+|||++|.|... |
T Consensus 118 ~~~~~~~~VaVliP~---yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~--e-------------- 177 (691)
T PRK05454 118 PPPPPEARTAILMPI---YNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA--E-------------- 177 (691)
T ss_pred CCCCCCCceEEEEeC---CCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH--H--------------
Confidence 113457999999999 9999864 566666777799985 799999999999854210 1
Q ss_pred cCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhcc
Q 004692 165 YGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQAD 244 (736)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~ 244 (736)
+ +.+++++.+.
T Consensus 178 -----------------------------~----~~~~~L~~~~------------------------------------ 188 (691)
T PRK05454 178 -----------------------------E----AAWLELRAEL------------------------------------ 188 (691)
T ss_pred -----------------------------H----HHHHHHHHhc------------------------------------
Confidence 0 1122222111
Q ss_pred ccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEcc
Q 004692 245 LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 323 (736)
Q Consensus 245 ~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 323 (736)
..-+++.|.+|++| .++||||+|++++.++ .++|||+++|||++++ ||++++++++|. ||+ +|.||+
T Consensus 189 -~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP~----vGlVQt 256 (691)
T PRK05454 189 -GGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANPR----AGLIQT 256 (691)
T ss_pred -CCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCcC----EEEEeC
Confidence 00135788888765 6789999999999866 6789999999999965 999999999986 776 999999
Q ss_pred CceeccCCCCchhhhhhh----hhhhhhHhhhhhcC--CccccccccceehhhccCCccccccchHhhHhhhcCchhHHh
Q 004692 324 PQKFHNFNEHDIYDGSLR----SGYRLQWPGMDGLK--GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIK 397 (736)
Q Consensus 324 pq~f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~--~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~ 397 (736)
++.+.|.+ ..+++-+. ++......|.+.|+ ...|+|+|+++||+++..
T Consensus 257 ~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~------------------------ 310 (691)
T PRK05454 257 LPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE------------------------ 310 (691)
T ss_pred CccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH------------------------
Confidence 99998853 34554322 33344567777665 457999999999999942
Q ss_pred hhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEecc
Q 004692 398 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTS 477 (736)
Q Consensus 398 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~a 477 (736)
.|+.. .....+||..++++||++++.+++++|||++|+++. +.+++++
T Consensus 311 ----------------------------~~glp---~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~-~~~~ee~ 358 (691)
T PRK05454 311 ----------------------------HCGLP---PLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL-PGSYEEL 358 (691)
T ss_pred ----------------------------hcCCc---cccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc-ccccccC
Confidence 01100 000236799999999999999999999999999862 4689999
Q ss_pred CcCHHHHHHhhHHHhcccchhhhhhcCCcccCCCCCchhHHHHHHHHhHhh
Q 004692 478 TTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFP 528 (736)
Q Consensus 478 P~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~ 528 (736)
|+|+.++++||.||++|++|++.. +. .+++++.+|++|++..+.+
T Consensus 359 P~tl~~~~~qr~RW~~G~lQ~l~~----l~--~~gl~~~~R~~~l~g~~~y 403 (691)
T PRK05454 359 PPNLLDELKRDRRWCQGNLQHLRL----LL--AKGLHPVSRLHFLTGIMSY 403 (691)
T ss_pred CCCHHHHHHHHHHHHhchHHHHHH----HH--hcCCCHHHHHHHHHHHHHH
Confidence 999999999999999999998852 22 2689999999888755555
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=7.8e-36 Score=336.77 Aligned_cols=230 Identities=19% Similarity=0.197 Sum_probs=184.2
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
.+..|.|+|+||+ |||+ ..+.+|+.|+++++||+ ++|+|+|||++|.|.+.+.+..+
T Consensus 71 ~~~~p~vsViIP~---yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~----------------- 127 (444)
T PRK14583 71 LKGHPLVSILVPC---FNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLA----------------- 127 (444)
T ss_pred cCCCCcEEEEEEe---CCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 3457999999999 9999 57899999999999995 89999999999977653322110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
+.|+
T Consensus 128 ----------------------------------------------------------------------------~~~~ 131 (444)
T PRK14583 128 ----------------------------------------------------------------------------EDPR 131 (444)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0123
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceecc
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n 329 (736)
+.++.+++ +++||+|+|.|++. +++|+++++|||+++ +||++++++..|. ||+ +|.||+.....|
T Consensus 132 v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~-~~d~L~~lv~~~~~~~~----~g~v~g~~~~~~ 197 (444)
T PRK14583 132 LRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALL-DKNAVPYLVAPLIANPR----TGAVTGNPRIRT 197 (444)
T ss_pred EEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCc-CHHHHHHHHHHHHhCCC----eEEEEccceecC
Confidence 55665544 45799999999998 899999999999985 6999999998775 444 999999877665
Q ss_pred CCCCchhhh----hhhhhhhhhHhhhhhcCCcc-ccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhcc
Q 004692 330 FNEHDIYDG----SLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (736)
Q Consensus 330 ~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~ 404 (736)
. +..++. +...+++.+.++.+..+..+ .+|+++++||+++.
T Consensus 198 ~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~-------------------------------- 243 (444)
T PRK14583 198 R--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALA-------------------------------- 243 (444)
T ss_pred C--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHH--------------------------------
Confidence 3 222332 22334455666666666554 36889999999992
Q ss_pred ccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHH
Q 004692 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~ 484 (736)
+.|||+.++++||++++++++++||++.|+++ +.+++++|+|++++
T Consensus 244 --------------------------------~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~ 289 (444)
T PRK14583 244 --------------------------------DVGYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGL 289 (444)
T ss_pred --------------------------------HcCCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHH
Confidence 24679999999999999999999999999986 78999999999999
Q ss_pred HHhhHHHhcccchhhhh
Q 004692 485 LIQGTRWASGLIDVSIS 501 (736)
Q Consensus 485 l~Qr~RWa~G~~qi~~~ 501 (736)
++||.||++|.+|++++
T Consensus 290 ~~Qr~RW~~G~~~~~~~ 306 (444)
T PRK14583 290 WKQRLRWAQGGAEVFLK 306 (444)
T ss_pred HHHHHHHhCcHHHHHHH
Confidence 99999999999999974
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.5e-36 Score=318.16 Aligned_cols=242 Identities=16% Similarity=0.214 Sum_probs=183.5
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHc----CCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCc
Q 004692 97 IDVFICTADPEKEPAIGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 97 VdV~Ipt~~p~nE~~~~v~~Tv~s~~~----~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p 172 (736)
|+|+||+ |||+++++.+|+.+.+. ++|+. +++|+|+|||+++...
T Consensus 1 ~SIliP~---~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--------------------------- 49 (254)
T cd04191 1 TAIVMPV---YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--------------------------- 49 (254)
T ss_pred CEEEEeC---CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH---------------------------
Confidence 6899999 99999999999999875 57633 4999999999987211
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEE
Q 004692 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
..|+. .+++++.+. ...++++
T Consensus 50 ------------------~~~~~----~~~~l~~~~-------------------------------------~~~~~v~ 70 (254)
T cd04191 50 ------------------LAEEA----AWLDLCEEL-------------------------------------GAQGRIY 70 (254)
T ss_pred ------------------HHHHH----HHHHHHHHh-------------------------------------CCCCcEE
Confidence 00111 111111110 0134689
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCC
Q 004692 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n~~ 331 (736)
|++|+++ .|.||||||+++...+ +++|+|+++|||+++ +||+|.+++.+|. ||+ +|+||+|+.+.|.+
T Consensus 71 ~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~-~p~~l~~~v~~~~~~~~----vg~vq~~~~~~n~~ 139 (254)
T cd04191 71 YRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLM-SGDTIVRLVRRMEANPR----AGIIQTAPKLIGAE 139 (254)
T ss_pred EEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCC-CHHHHHHHHHHHHhCCC----EEEEeCCceeECCC
Confidence 9999886 5789999999998643 678999999999986 5999999999996 776 99999999999863
Q ss_pred CCchhhhh----hhhhhhhhHhhhhhcCC--ccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccc
Q 004692 332 EHDIYDGS----LRSGYRLQWPGMDGLKG--PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH 405 (736)
Q Consensus 332 ~~d~~~~~----~~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~ 405 (736)
..+.+- ...|...++.|++.|++ .+|+|+++++||++|.. .
T Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~-----------~-------------------- 186 (254)
T cd04191 140 --TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFME-----------H-------------------- 186 (254)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHH-----------h--------------------
Confidence 233332 23455667778877643 67899999999999931 0
Q ss_pred cccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHH
Q 004692 406 KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVL 485 (736)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l 485 (736)
|..+ ..|..+||.+++++||+++|++++++||+++|.++. ..+.+++|+|+++++
T Consensus 187 ---------------------~~~~---~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~~~~~~~ 241 (254)
T cd04191 187 ---------------------CALP---VLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPPTLIDFL 241 (254)
T ss_pred ---------------------cCCc---cccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCCCHHHHH
Confidence 0000 112245788899999999999999999999999862 235899999999999
Q ss_pred HhhHHHhcccch
Q 004692 486 IQGTRWASGLID 497 (736)
Q Consensus 486 ~Qr~RWa~G~~q 497 (736)
+||.||++|++|
T Consensus 242 ~qr~RW~~G~~q 253 (254)
T cd04191 242 KRDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHHhhcCc
Confidence 999999999998
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=2.1e-35 Score=330.50 Aligned_cols=233 Identities=26% Similarity=0.332 Sum_probs=181.4
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcc
Q 004692 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~ 173 (736)
.|+|||+||+ |||+++++++|+.|++++|||. ++|+|+|||++|.|.+.+.| ++.+
T Consensus 53 ~p~vsviiP~---ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~--------------~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPA---YNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEE--------------LGAE----- 108 (439)
T ss_pred CCceEEEEec---CCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHH--------------HHhh-----
Confidence 5999999999 9999889999999999999998 88999999999976543222 2110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEE
Q 004692 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
+ + |.++.
T Consensus 109 ---------------------------~----------------------~------------------------~~~~~ 115 (439)
T COG1215 109 ---------------------------Y----------------------G------------------------PNFRV 115 (439)
T ss_pred ---------------------------c----------------------C------------------------cceEE
Confidence 0 0 11122
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCC
Q 004692 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEH 333 (736)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~ 333 (736)
+..++ ++++|++|+|.+++. +++|+|+++|||+++ +||+|++++..|.|+.. ++.+|.|+.+.+.+..
T Consensus 116 ~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~-~~d~l~~~~~~f~~~~~---~~v~~~~~~~~~~~~~ 183 (439)
T COG1215 116 IYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVP-EPDALRELVSPFEDPPV---GAVVGTPRIRNRPDPS 183 (439)
T ss_pred Eeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCC-ChhHHHHHHhhhcCCCe---eEEeCCceeeecCChh
Confidence 21112 378999999999999 889999999999985 59999999999998763 4689999887764221
Q ss_pred chhhhhhhhhhh-----hhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhcccccc
Q 004692 334 DIYDGSLRSGYR-----LQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 408 (736)
Q Consensus 334 d~~~~~~~~f~~-----~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~ 408 (736)
..++..+...|. ....+.+.....+++|++.++||++|.
T Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~------------------------------------ 227 (439)
T COG1215 184 NLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALE------------------------------------ 227 (439)
T ss_pred hhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHH------------------------------------
Confidence 222322222221 122222222456789999999999992
Q ss_pred CCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhh
Q 004692 409 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQG 488 (736)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr 488 (736)
+.+||..+++|||.++++++|.+|||+.|+++ +.+.+++|+|+.++++||
T Consensus 228 ----------------------------~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr 277 (439)
T COG1215 228 ----------------------------EVGGWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQR 277 (439)
T ss_pred ----------------------------HhCCCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHH
Confidence 24679999999999999999999999999986 789999999999999999
Q ss_pred HHHhcccchhhhh
Q 004692 489 TRWASGLIDVSIS 501 (736)
Q Consensus 489 ~RWa~G~~qi~~~ 501 (736)
.||++|.+|++..
T Consensus 278 ~RW~~g~~~~~~~ 290 (439)
T COG1215 278 LRWARGGLQVLLL 290 (439)
T ss_pred HHHHcccceeeeh
Confidence 9999999999974
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.3e-33 Score=315.84 Aligned_cols=230 Identities=22% Similarity=0.267 Sum_probs=181.6
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
.+..|+|+|+||+ |||+ +.+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+.+
T Consensus 50 ~~~~p~vsViIp~---yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~------------------ 105 (420)
T PRK11204 50 LKEYPGVSILVPC---YNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLA------------------ 105 (420)
T ss_pred cCCCCCEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHH------------------
Confidence 3567999999999 9998 78999999999999994 8999999999997754322210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
...|+
T Consensus 106 ---------------------------------------------------------------------------~~~~~ 110 (420)
T PRK11204 106 ---------------------------------------------------------------------------AQIPR 110 (420)
T ss_pred ---------------------------------------------------------------------------HhCCc
Confidence 01234
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceecc
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n 329 (736)
+.++.+++ +++|++|+|.|++. +++|+++++|||+++ +||+|.+++..|. ||+ ++.||+.....|
T Consensus 111 v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~-~~d~L~~l~~~~~~~~~----v~~v~g~~~~~~ 176 (420)
T PRK11204 111 LRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALL-DPDAAAYMVEHFLHNPR----VGAVTGNPRIRN 176 (420)
T ss_pred EEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCC-ChhHHHHHHHHHHhCCC----eEEEECCceecc
Confidence 67776554 45799999999998 899999999999986 5999999999984 665 999999877765
Q ss_pred CCCCchhhhhh----hhhhhhhHhhhhhcCCcc-ccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhcc
Q 004692 330 FNEHDIYDGSL----RSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (736)
Q Consensus 330 ~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~ 404 (736)
. +...+..+ ...+.....+....+... .+|+++++||+++.
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~-------------------------------- 222 (420)
T PRK11204 177 R--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALH-------------------------------- 222 (420)
T ss_pred c--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHH--------------------------------
Confidence 3 22233222 122223333333344433 35888999999992
Q ss_pred ccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHH
Q 004692 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~ 484 (736)
+.+||+.+.++||++++++++++||++.|+++ +.++++.|+|++++
T Consensus 223 --------------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~ 268 (420)
T PRK11204 223 --------------------------------EVGYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGL 268 (420)
T ss_pred --------------------------------HhCCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHH
Confidence 24689999999999999999999999999986 78999999999999
Q ss_pred HHhhHHHhcccchhhhh
Q 004692 485 LIQGTRWASGLIDVSIS 501 (736)
Q Consensus 485 l~Qr~RWa~G~~qi~~~ 501 (736)
++||.||++|++|.++.
T Consensus 269 ~~Qr~RW~~G~~~~l~~ 285 (420)
T PRK11204 269 WKQRLRWAQGGAEVLLK 285 (420)
T ss_pred HHHHHHHhcCHHHHHHH
Confidence 99999999999999974
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=4.4e-34 Score=322.06 Aligned_cols=282 Identities=17% Similarity=0.194 Sum_probs=202.0
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
++..|+|+|+||+ |||+ +.+.+|+.|+.+++||.++++|+|+|||++|.|.+.+.+.++
T Consensus 45 ~~~~P~vsVIIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------------- 103 (439)
T TIGR03111 45 IGKLPDITIIIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------------- 103 (439)
T ss_pred cCCCCCEEEEEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 3568999999999 9999 899999999999999999999999999999987654333210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
..|+
T Consensus 104 ----------------------------------------------------------------------------~~~~ 107 (439)
T TIGR03111 104 ----------------------------------------------------------------------------EFPG 107 (439)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0011
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceecc
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n 329 (736)
+..+.-++ ++|||+|+|.|++. ++||+|+++|||+++ +||++++++..|. ||+ ++.|++.+.-..
T Consensus 108 v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~-~~d~L~~l~~~f~~~~~----v~~v~g~~~~~~ 173 (439)
T TIGR03111 108 LSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKL-HKDAIKNMVTRFENNPD----IHAMTGVILTDK 173 (439)
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCc-ChHHHHHHHHHHHhCCC----eEEEEeEEecCc
Confidence 22221122 46899999999998 899999999999985 6999999999986 555 777765432211
Q ss_pred CC--C-Cc---hhhhhhhhhhhhhH---hh--hh-hcCCcc-ccccccceehhhccCCccccccchHhhHhhhcCchhHH
Q 004692 330 FN--E-HD---IYDGSLRSGYRLQW---PG--MD-GLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFI 396 (736)
Q Consensus 330 ~~--~-~d---~~~~~~~~f~~~~~---~g--~d-~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~ 396 (736)
.. . .. .+.... .++++.. .| .. ..+..+ .+|+++++||+++.
T Consensus 174 ~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~------------------------ 228 (439)
T TIGR03111 174 ELIEKTKGRFLKLIRRC-EYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETIL------------------------ 228 (439)
T ss_pred hhhhhhcchhhhHhHHh-HHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHH------------------------
Confidence 00 0 00 011111 1122111 11 11 122322 45788899999992
Q ss_pred hhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHH-CCcEEEEeCCCCCeeEe
Q 004692 397 KSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC-KGWTSTYLDPSRPQFLG 475 (736)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~-~Gwrs~y~~~~~~~~~g 475 (736)
+.+||+.++++||++++++++. .|+++.|+++ +.++.
T Consensus 229 ----------------------------------------~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~ 266 (439)
T TIGR03111 229 ----------------------------------------KTQLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYV 266 (439)
T ss_pred ----------------------------------------HhCCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEE
Confidence 2478999999999999999975 5999999986 78999
Q ss_pred ccCcCHHHHHHhhHHHhcccchhhhhhcCCcccCCCCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcc
Q 004692 476 TSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLY 553 (736)
Q Consensus 476 ~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~ 553 (736)
++|+|++++++||.||++|.+|++....++... .+.++.+++.+....... ...+|.+++.++++++.++|.++.
T Consensus 267 ~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 267 DPIDGLNKLYTQRQRWQRGELEVSHMFFESANK--SIKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred ECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh--chhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999999999999743333321 345666666654433444 557788888889988888887654
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=4.7e-31 Score=299.22 Aligned_cols=263 Identities=16% Similarity=0.130 Sum_probs=181.6
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHH-HcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSA-MALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~-~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
...|+|+|+||+ |||+ +++.+||.++ .++||| +++|+|+||+++|.|.+.+.+.++
T Consensus 63 ~~~p~vaIlIPA---~NE~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~~----------------- 119 (504)
T PRK14716 63 VPEKRIAIFVPA---WREA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLAA----------------- 119 (504)
T ss_pred CCCCceEEEEec---cCch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 458999999999 9998 7999999996 478997 489999999999987654333210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
.| |+
T Consensus 120 ---------------------------------------------------~~-------------------------p~ 123 (504)
T PRK14716 120 ---------------------------------------------------RY-------------------------PR 123 (504)
T ss_pred ---------------------------------------------------HC-------------------------CC
Confidence 11 22
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcC--CCCCC---CEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCc
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 325 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~--~~s~g---~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq 325 (736)
++.+. .+++| .++|++|||.+++... ...+| |+|+++|||+++ +|++|+....++.| .++||.|.
T Consensus 124 v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v-~Pd~Lr~~~~~~~~------~~~VQ~pv 193 (504)
T PRK14716 124 VHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVI-HPLELRLYNYLLPR------HDFVQLPV 193 (504)
T ss_pred eEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCc-CccHHHHHHhhcCC------CCEEecce
Confidence 33222 12333 3589999999997521 01244 999999999985 59999876555433 57899998
Q ss_pred eeccCCCCchhh----hhhhhhhhhhHhhhhhcCCcc-ccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhh
Q 004692 326 KFHNFNEHDIYD----GSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 400 (736)
Q Consensus 326 ~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~ 400 (736)
...+.+.....+ .+....+...+..++.+++++ ++|+|++|||++|. ++...
T Consensus 194 ~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe-----------~l~~~------------ 250 (504)
T PRK14716 194 FSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALE-----------RLAAE------------ 250 (504)
T ss_pred eccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHH-----------HHHhh------------
Confidence 765543222211 111122333455677888765 67999999999992 11000
Q ss_pred hhccccccCCccchhhHHhhccccccceeeccccccccc-cccCCCccchHHHHHHHHHCCcEEEEeCCCC---------
Q 004692 401 QSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSR--------- 470 (736)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~-G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~--------- 470 (736)
..| +|+.+++|||+++|++++.+|||++|++...
T Consensus 251 ------------------------------------~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~ 294 (504)
T PRK14716 251 ------------------------------------RGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDR 294 (504)
T ss_pred ------------------------------------cCCCCCCCCCcchHHHHHHHHHHCCCEEEEeccccccccccccc
Confidence 013 3999999999999999999999999998620
Q ss_pred ----CeeEeccCcCHHHHHHhhHHHhccc-chhhhhhc--CCcccCCCCCchhHHHHHHHH
Q 004692 471 ----PQFLGTSTTNLNDVLIQGTRWASGL-IDVSISRF--CPLLYGPSRMSLLLSMCYGEM 524 (736)
Q Consensus 471 ----~~~~g~aP~tl~~~l~Qr~RWa~G~-~qi~~~~~--~p~~~~~~~l~~~qrl~y~~~ 524 (736)
....+++|+|++++++||.||+.|. +|...... .++. .+.+.+++|..-+..
T Consensus 295 ~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~ 353 (504)
T PRK14716 295 RGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTN 353 (504)
T ss_pred ccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHH
Confidence 1245889999999999999999995 78764210 1111 234667788766654
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=2.1e-30 Score=266.08 Aligned_cols=227 Identities=24% Similarity=0.330 Sum_probs=175.0
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccc
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+ +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+..+
T Consensus 1 p~vSViIp~---yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPV---FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEec---CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 689999999 9998 799999999999999998999999998 88888764433210
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEE
Q 004692 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
++.+ .-+++.++
T Consensus 55 -------------------------~~~~-------------------------------------------~~~~i~~~ 66 (232)
T cd06437 55 -------------------------EYAA-------------------------------------------QGVNIKHV 66 (232)
T ss_pred -------------------------HHhh-------------------------------------------cCCceEEE
Confidence 0000 01246777
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCc
Q 004692 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d 334 (736)
.+.++ .++|++|+|.|++. ++||+|+++|||+++ +|++|+++..++.|++ +|+||++..+.|.+. .
T Consensus 67 ~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~-~~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~~-~ 132 (232)
T cd06437 67 RRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVP-PPDFLQKTPPYFADPK----LGFVQTRWGHINANY-S 132 (232)
T ss_pred ECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCC-ChHHHHHhhhhhcCCC----eEEEecceeeEcCCC-c
Confidence 66554 45799999999998 899999999999996 5999999888887766 999998776655422 1
Q ss_pred hhhhhh----hhhhhhhHhhhhhcCCc-cccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccC
Q 004692 335 IYDGSL----RSGYRLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (736)
Q Consensus 335 ~~~~~~----~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 409 (736)
.+...+ ..++...+.+....+.. .++|++++|||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------- 175 (232)
T cd06437 133 LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIE------------------------------------- 175 (232)
T ss_pred hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHH-------------------------------------
Confidence 221111 11233333344333332 357999999999982
Q ss_pred CccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhH
Q 004692 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~ 489 (736)
+.+||+..+..||+++++|++.+||++.|+++ +.+++..|+|++++++||+
T Consensus 176 ---------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~ 226 (232)
T cd06437 176 ---------------------------DAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQH 226 (232)
T ss_pred ---------------------------HhCCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHH
Confidence 24679988999999999999999999999986 7899999999999999999
Q ss_pred HHhccc
Q 004692 490 RWASGL 495 (736)
Q Consensus 490 RWa~G~ 495 (736)
||++|.
T Consensus 227 rW~~g~ 232 (232)
T cd06437 227 RWSKGP 232 (232)
T ss_pred HhccCC
Confidence 999994
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=3.7e-30 Score=262.59 Aligned_cols=229 Identities=37% Similarity=0.534 Sum_probs=184.4
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccc
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+++.+++|+.|+++++||.++++|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsviip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~----------------------- 54 (234)
T cd06421 1 PTVDVFIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAEL----------------------- 54 (234)
T ss_pred CceEEEEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHh-----------------------
Confidence 789999999 999878999999999999999988999999999998654322110
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEE
Q 004692 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
.. . .++.++
T Consensus 55 ------------------------------~~----------------------------------------~-~~~~~~ 63 (234)
T cd06421 55 ------------------------------GV----------------------------------------E-YGYRYL 63 (234)
T ss_pred ------------------------------hc----------------------------------------c-cCceEE
Confidence 00 0 013556
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC-CCCCCceEEEccCceeccCCCC
Q 004692 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-PKTSSSLAFVQFPQKFHNFNEH 333 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D-~~~~~~vg~VQ~pq~f~n~~~~ 333 (736)
.++++ .++|+||+|.|++. +++|+|+++|+|.++ +|++|.+++..|.+ ++ ++.|++++.+.+.+..
T Consensus 64 ~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~~~----~~~v~~~~~~~~~~~~ 130 (234)
T cd06421 64 TRPDN----RHAKAGNLNNALAH----TTGDFVAILDADHVP-TPDFLRRTLGYFLDDPK----VALVQTPQFFYNPDPF 130 (234)
T ss_pred EeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccccCc-CccHHHHHHHHHhcCCC----eEEEecceEEecCCcc
Confidence 55543 57899999999998 899999999999996 59999999999975 54 9999999888765432
Q ss_pred c----hhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccC
Q 004692 334 D----IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (736)
Q Consensus 334 d----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 409 (736)
+ .+......++.....+...++...++|++.++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~------------------------------------- 173 (234)
T cd06421 131 DWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALD------------------------------------- 173 (234)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHH-------------------------------------
Confidence 1 12223344555555566556677788999999999982
Q ss_pred CccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhH
Q 004692 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~ 489 (736)
+.+||+.+.+.||++++++++++||++.|.++ +.+.+..|++++++++||.
T Consensus 174 ---------------------------~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~ 224 (234)
T cd06421 174 ---------------------------EIGGFPTDSVTEDLATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRL 224 (234)
T ss_pred ---------------------------HhCCCCccceeccHHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHHH
Confidence 24678888899999999999999999999987 6889999999999999999
Q ss_pred HHhcccchhh
Q 004692 490 RWASGLIDVS 499 (736)
Q Consensus 490 RWa~G~~qi~ 499 (736)
||.+|++|++
T Consensus 225 rw~~~~~~~~ 234 (234)
T cd06421 225 RWARGMLQIL 234 (234)
T ss_pred HHhcCCeeeC
Confidence 9999999864
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=3.3e-28 Score=286.21 Aligned_cols=240 Identities=20% Similarity=0.238 Sum_probs=172.0
Q ss_pred CCCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhc
Q 004692 87 RLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (736)
Q Consensus 87 ~l~~~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~-~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~ 165 (736)
.++ ++..|+|+|+||+ |||+ .++.+|+.+++ ++|||+ ++|+++||++++.|.+++.+.+ ++
T Consensus 56 ~l~-~~~~~~vsIlVPa---~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~----------~~- 117 (727)
T PRK11234 56 ELY-KPDEKPLAIMVPA---WNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC----------AR- 117 (727)
T ss_pred hcc-cCCCCCEEEEEec---Ccch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH----------HH-
Confidence 344 4566999999999 9998 89999999987 799997 8999999888876664332221 11
Q ss_pred CCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccc
Q 004692 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADL 245 (736)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~ 245 (736)
T Consensus 118 -------------------------------------------------------------------------------- 117 (727)
T PRK11234 118 -------------------------------------------------------------------------------- 117 (727)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCC-----CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEE
Q 004692 246 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAF 320 (736)
Q Consensus 246 ~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~-----s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~ 320 (736)
+|+++.+.-+ ++| .++||+|||+++...... ...++++++|||.++ +|++|+ .+.++.++. ++
T Consensus 118 --~p~~~~v~~~-~~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v-~pd~L~-~~~~l~~~~-----~~ 185 (727)
T PRK11234 118 --FPNVHKVVCA-RPG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVI-SPMELR-LFNYLVERK-----DL 185 (727)
T ss_pred --CCCcEEEEeC-CCC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCC-ChhHHH-HHHhhcCCC-----Ce
Confidence 1222222221 233 458999999999873100 134678889999985 699997 677787543 89
Q ss_pred EccCceeccCCCCchhh----hhhhhhhhhhHhhhhhcCCcc-ccccccceehh---hccCCccccccchHhhHhhhcCc
Q 004692 321 VQFPQKFHNFNEHDIYD----GSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRE---SLYGNFKHKGIDLAELKDTFGES 392 (736)
Q Consensus 321 VQ~pq~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~---aL~~~~~~~~~d~~~~~~~~~~~ 392 (736)
||.|....+.+.+...+ .+....+...+.+++.++++. +.|+|++|+|+ +|.
T Consensus 186 VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~-------------------- 245 (727)
T PRK11234 186 IQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALL-------------------- 245 (727)
T ss_pred EeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHH--------------------
Confidence 99996633322122222 222233445678888887664 57999999444 341
Q ss_pred hhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccc---cccCCCccchHHHHHHHHHCCcEEEEeCCC
Q 004692 393 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV---GFSYQSVSEDFFTGFILHCKGWTSTYLDPS 469 (736)
Q Consensus 393 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~---G~~~~sitED~~t~~rl~~~Gwrs~y~~~~ 469 (736)
+.| ||+.+++|||+++|++|+.+||++.|++..
T Consensus 246 --------------------------------------------~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~ 281 (727)
T PRK11234 246 --------------------------------------------EDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFP 281 (727)
T ss_pred --------------------------------------------HhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccc
Confidence 123 599999999999999999999999999821
Q ss_pred ---------------------CCeeEeccCcCHHHHHHhhHHHhcc-cchhhh
Q 004692 470 ---------------------RPQFLGTSTTNLNDVLIQGTRWASG-LIDVSI 500 (736)
Q Consensus 470 ---------------------~~~~~g~aP~tl~~~l~Qr~RWa~G-~~qi~~ 500 (736)
...++++.|+|+++.++||.||.+| .+|.+.
T Consensus 282 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 282 VVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 1347888999999999999999999 588764
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.97 E-value=3.3e-29 Score=259.30 Aligned_cols=231 Identities=24% Similarity=0.311 Sum_probs=177.4
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccc
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~ 174 (736)
|.|+|+||+ |||+ +.+.+|+.|+++++||.++++|+|+|||++|.|.+.+.+.. .
T Consensus 1 p~vsIiIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~--------------~------- 55 (241)
T cd06427 1 PVYTILVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR--------------L------- 55 (241)
T ss_pred CeEEEEEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc--------------c-------
Confidence 789999999 9998 79999999999999998889999999999997764321110 0
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEE
Q 004692 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
+ ...+++++
T Consensus 56 -------------------------------------------------~----------------------~~~~i~~~ 64 (241)
T cd06427 56 -------------------------------------------------P----------------------SIFRVVVV 64 (241)
T ss_pred -------------------------------------------------C----------------------CCeeEEEe
Confidence 0 00123444
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCc
Q 004692 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d 334 (736)
...+ ..+|++|+|.|++. ++||+|+++|+|++++ |+++.+++.+|.+. ++++++||++..+.|...+
T Consensus 65 ~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~- 131 (241)
T cd06427 65 PPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPLNYYNAREN- 131 (241)
T ss_pred cCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCcc-
Confidence 3222 45899999999998 8999999999999965 99999999998631 2359999998877764221
Q ss_pred hhhh----hhhhhhhhhHhhhhhcCCcc-ccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccC
Q 004692 335 IYDG----SLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (736)
Q Consensus 335 ~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 409 (736)
.... +....++...++....+... +.|++.++||+++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------- 174 (241)
T cd06427 132 WLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLR------------------------------------- 174 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHH-------------------------------------
Confidence 1111 11223444455555555544 46888899999982
Q ss_pred CccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhH
Q 004692 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~ 489 (736)
+.+||+....+||++.++|++++|||+.+++. ...+..|+|++++++||.
T Consensus 175 ---------------------------~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~ 224 (241)
T cd06427 175 ---------------------------ELGGWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRS 224 (241)
T ss_pred ---------------------------HcCCCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHH
Confidence 24678887889999999999999999999974 457899999999999999
Q ss_pred HHhcccchhhhh
Q 004692 490 RWASGLIDVSIS 501 (736)
Q Consensus 490 RWa~G~~qi~~~ 501 (736)
||+.|.+|++..
T Consensus 225 Rw~~g~~~~~~~ 236 (241)
T cd06427 225 RWIKGYMQTWLV 236 (241)
T ss_pred HHhccHHHHHHH
Confidence 999999999973
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=4.8e-28 Score=248.51 Aligned_cols=229 Identities=24% Similarity=0.324 Sum_probs=170.5
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccccc
Q 004692 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~ 177 (736)
+|+||+ |||+++.+.+|+.|+.+++||. .+|+|+|||++|.|.....+. +|++++
T Consensus 1 siiip~---~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~---------~~~~~~----------- 55 (236)
T cd06435 1 SIHVPC---YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEA---------HCAQLG----------- 55 (236)
T ss_pred CeeEee---CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHH---------HHHHhC-----------
Confidence 589999 9998889999999999999996 789999999999764211110 000000
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEecc
Q 004692 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
+++.++..+
T Consensus 56 -----------------------------------------------------------------------~~i~~i~~~ 64 (236)
T cd06435 56 -----------------------------------------------------------------------ERFRFFHVE 64 (236)
T ss_pred -----------------------------------------------------------------------CcEEEEEcC
Confidence 124566554
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhh
Q 004692 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~ 337 (736)
++ .++|+||+|.|++.+. .++|+|+++|+|..++ |++|.+++..|.+++ ++.|+++..+.+.. ..++.
T Consensus 65 ~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~-~~~~~ 132 (236)
T cd06435 65 PL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDPR----VGFVQAPQDYRDGE-ESLFK 132 (236)
T ss_pred CC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCCC----eeEEecCccccCCC-ccHHH
Confidence 43 4569999999999832 3589999999999865 999999999987655 99999887655421 22232
Q ss_pred hhhh----hhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccc
Q 004692 338 GSLR----SGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 413 (736)
Q Consensus 338 ~~~~----~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
.... .++..........+..+..|+++++||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------------- 171 (236)
T cd06435 133 RMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALD----------------------------------------- 171 (236)
T ss_pred HHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHH-----------------------------------------
Confidence 1111 1111111222223344567888999999982
Q ss_pred hhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhc
Q 004692 414 SNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWAS 493 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~ 493 (736)
+.+||+.+...||+++++|++++||++.|+++ +......|+|+.++.+||.||++
T Consensus 172 -----------------------~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~ 226 (236)
T cd06435 172 -----------------------DVGGWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAY 226 (236)
T ss_pred -----------------------HhCCCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhc
Confidence 24679888899999999999999999999986 57789999999999999999999
Q ss_pred ccchhhh
Q 004692 494 GLIDVSI 500 (736)
Q Consensus 494 G~~qi~~ 500 (736)
|++|++.
T Consensus 227 g~~~~~~ 233 (236)
T cd06435 227 GAVQILK 233 (236)
T ss_pred chhhhhh
Confidence 9999986
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=8.1e-29 Score=252.60 Aligned_cols=224 Identities=28% Similarity=0.333 Sum_probs=144.5
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccc
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+ +.+.+||.|+++++||. ++|+|+||++++.|.+.+.+..+ ++
T Consensus 1 P~v~Vvip~---~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~----------~~--------- 55 (228)
T PF13641_consen 1 PRVSVVIPA---YNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAA----------RY--------- 55 (228)
T ss_dssp --EEEE--B---SS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHH----------TT---------
T ss_pred CEEEEEEEe---cCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHH----------Hc---------
Confidence 789999999 9998 69999999999999965 99999999999876543322110 00
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEE
Q 004692 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
|. -.+.++
T Consensus 56 -------------------------------------------------~~-----------------------~~v~vi 63 (228)
T PF13641_consen 56 -------------------------------------------------PR-----------------------VRVRVI 63 (228)
T ss_dssp -------------------------------------------------GG------------------------GEEEE
T ss_pred -------------------------------------------------CC-----------------------CceEEe
Confidence 00 025677
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCc
Q 004692 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d 334 (736)
.+++++| ..+|++|+|.+++. +++|+|+++|+|.++ +|++|++++.+|.+|+ +++||++..+.+. +.
T Consensus 64 ~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~-~p~~l~~~~~~~~~~~----~~~v~~~~~~~~~--~~ 130 (228)
T PF13641_consen 64 RRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVL-DPDWLERLLAAFADPG----VGAVGGPVFPDND--RN 130 (228)
T ss_dssp E----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBSS------EEEEEEEETTC--CC
T ss_pred ecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEE-CHHHHHHHHHHHHhCC----CCeEeeeEeecCC--CC
Confidence 6655432 24799999999999 889999999999997 5999999999997776 9999988866642 22
Q ss_pred hhhhhhhhhh----hhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCC
Q 004692 335 IYDGSLRSGY----RLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (736)
Q Consensus 335 ~~~~~~~~f~----~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 410 (736)
.+..-...++ .....+....+...++|+++++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~-------------------------------------- 172 (228)
T PF13641_consen 131 WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE-------------------------------------- 172 (228)
T ss_dssp EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH--------------------------------------
T ss_pred HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH--------------------------------------
Confidence 2222222221 1122333445556678999999999992
Q ss_pred ccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHH
Q 004692 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~R 490 (736)
+.+||+.....||.++++++.++||++.|+++ +.++...|.|++++++||.|
T Consensus 173 --------------------------~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~R 224 (228)
T PF13641_consen 173 --------------------------EVGGFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFR 224 (228)
T ss_dssp --------------------------HH-S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHH
T ss_pred --------------------------HhCCCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhc
Confidence 24679988889999999999999999999986 68999999999999999999
Q ss_pred Hhcc
Q 004692 491 WASG 494 (736)
Q Consensus 491 Wa~G 494 (736)
|+.|
T Consensus 225 W~~g 228 (228)
T PF13641_consen 225 WSRG 228 (228)
T ss_dssp HH--
T ss_pred cCcC
Confidence 9988
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=2.9e-26 Score=253.42 Aligned_cols=228 Identities=15% Similarity=0.158 Sum_probs=166.4
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCC
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~ 171 (736)
+..|+|+|+||+ |||+ +.+.+|+.|+++||||. ++|+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~---~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPL---HGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEEC---CCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 347999999999 9998 57999999999999997 8999999999997654322110
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeE
Q 004692 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
+. ||. .++
T Consensus 93 ---------------------------~~----------------------~p~-----------------------~~i 100 (373)
T TIGR03472 93 ---------------------------AD----------------------FPD-----------------------ADI 100 (373)
T ss_pred ---------------------------Hh----------------------CCC-----------------------Cce
Confidence 00 111 125
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCC
Q 004692 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~ 331 (736)
+++..++++| .++|++|+|++++. +++|+++++|||.++ +||+|++++..|.||+ ++.|+++....+
T Consensus 101 ~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~-~p~~L~~lv~~~~~~~----v~~V~~~~~~~~-- 167 (373)
T TIGR03472 101 DLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISV-GPDYLRQVVAPLADPD----VGLVTCLYRGRP-- 167 (373)
T ss_pred EEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCc-ChhHHHHHHHHhcCCC----cceEeccccCCC--
Confidence 5665444433 45799999999998 899999999999986 4999999999998876 899988643222
Q ss_pred CCchhhhhhhh-----hhhhhHhhhhhcCC-ccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccc
Q 004692 332 EHDIYDGSLRS-----GYRLQWPGMDGLKG-PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH 405 (736)
Q Consensus 332 ~~d~~~~~~~~-----f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~ 405 (736)
.+.....-... |+...... +..+. .++.|++.++||+++.
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~--------------------------------- 213 (373)
T TIGR03472 168 VPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLE--------------------------------- 213 (373)
T ss_pred CCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHH---------------------------------
Confidence 12222211111 11111111 11222 3467888899999992
Q ss_pred cccCCccchhhHHhhccccccceeeccccccccccccC--CCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHH
Q 004692 406 KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLND 483 (736)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~ 483 (736)
+.|||+. ++++||++++.+++++||++.|.+. +......|+|+++
T Consensus 214 -------------------------------~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~~ 260 (373)
T TIGR03472 214 -------------------------------AIGGLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFAT 260 (373)
T ss_pred -------------------------------HcCChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHHH
Confidence 2467874 6789999999999999999999875 5677788899999
Q ss_pred HHHhhHHHhcccc
Q 004692 484 VLIQGTRWASGLI 496 (736)
Q Consensus 484 ~l~Qr~RWa~G~~ 496 (736)
+++||.||++...
T Consensus 261 ~~~q~~RW~r~~~ 273 (373)
T TIGR03472 261 LLAHELRWSRTIR 273 (373)
T ss_pred HHHHHHHHHhhhh
Confidence 9999999985544
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.94 E-value=5.7e-27 Score=243.97 Aligned_cols=172 Identities=19% Similarity=0.077 Sum_probs=114.7
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCCCchhhhhhhhhh----
Q 004692 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGY---- 344 (736)
Q Consensus 270 aLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~---- 344 (736)
++|.++.. +++|+|+++|||++++ |++|++++.+| .||+ +|.|++.+...|.. ...+...+..-|
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p~----vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDPE----IGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCCC----EEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 45666665 8999999999999974 99999999998 4666 99999988776642 122222111111
Q ss_pred hhhHhhhhhcCCc-cccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccchhhHHhhccc
Q 004692 345 RLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEV 423 (736)
Q Consensus 345 ~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (736)
.....+....+.. ...|++++||++++.+..... . .
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~--------------~-----------------------------~ 170 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGK--------------G-----------------------------P 170 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCcccc--------------c-----------------------------c
Confidence 1111223334433 356899999999995311000 0 0
Q ss_pred cccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEE--eCCCCCeeEeccCcCHHHHHHhhHHHhcccch
Q 004692 424 LASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTY--LDPSRPQFLGTSTTNLNDVLIQGTRWASGLID 497 (736)
Q Consensus 424 v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y--~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~q 497 (736)
+..++|...+.- ...+....+++||.+++++|..+||++.| +++ +.+++++|+|++++++||.||++|.+.
T Consensus 171 ~~~~~~~~~~~~-~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 171 LLDYAYLTNTVD-SLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred chhhccccCccc-chHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 000001111000 11223445789999999999999999999 775 789999999999999999999999874
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=8.4e-24 Score=246.36 Aligned_cols=236 Identities=17% Similarity=0.191 Sum_probs=167.3
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEE---EcCCCCccchhhHHHHHHhhhhhhhhhhhcC
Q 004692 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYL---SDDGGSPITLHGMREACRFAKWWLPFCRRYG 166 (736)
Q Consensus 91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~-~~dYP~~kl~v~v---~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~ 166 (736)
+.+.|.|+|+||+ |||+ +++.+||.+++ ++|||+ ++|+| .|||.+ .+++.+.+
T Consensus 67 ~~~~~~vsIlVPa---~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T---~~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPA---WKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAET---ITEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeC---CCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccH---HHHHHHHh--------------
Confidence 4567999999999 9998 89999999986 899995 78999 477643 32221110
Q ss_pred CccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhcccc
Q 004692 167 IKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLV 246 (736)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~ 246 (736)
.
T Consensus 124 -------------------------------------------------------------------------------~ 124 (703)
T PRK15489 124 -------------------------------------------------------------------------------R 124 (703)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CcCeEEEEeccCCCCCCCCChHHHHHHHHHhc---CCCCCCCE--EEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEE
Q 004692 247 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVS---GVISNSPY--ILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 321 (736)
Q Consensus 247 ~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s---~~~s~g~~--Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 321 (736)
.+|+++-+..+. + ...+||.|||.++... .....++| |+++|||.+ ++|++|+. +.++.+.. .+|
T Consensus 125 ~~p~~~~v~~~~-~--gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~-~~P~~L~~-~~~~~~~~-----~~i 194 (703)
T PRK15489 125 RYKRLVRVEVPH-D--GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDV-LHPLELKY-FNYLLPRK-----DLV 194 (703)
T ss_pred cCCcEEEEEcCC-C--CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCC-CChhHHHH-HHhhcCCc-----cee
Confidence 123444444322 2 2468999999999862 00113444 999999998 57999965 46665332 468
Q ss_pred ccCceeccCCCCc----hhhhhhhhhhhhhHhhhhhcCCccc-cccccceehhhccCCccccccchHhhHhhhcCchhHH
Q 004692 322 QFPQKFHNFNEHD----IYDGSLRSGYRLQWPGMDGLKGPFL-TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFI 396 (736)
Q Consensus 322 Q~pq~f~n~~~~d----~~~~~~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~ 396 (736)
|.|-.-...+... .|..+....++..+.++..+++++. .|+|++|||++|. ++
T Consensus 195 Q~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~-----------~l----------- 252 (703)
T PRK15489 195 QLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALL-----------AL----------- 252 (703)
T ss_pred eeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHH-----------HH-----------
Confidence 9873211111222 3444556667888899988888775 6899999999982 11
Q ss_pred hhhhhhccccccCCccchhhHHhhccccccceeeccccccccc---cccCCCccchHHHHHHHHHCCcEEEEeCC-----
Q 004692 397 KSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV---GFSYQSVSEDFFTGFILHCKGWTSTYLDP----- 468 (736)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~---G~~~~sitED~~t~~rl~~~Gwrs~y~~~----- 468 (736)
+ +++ ||+.+|+|||+++|+||+++|||+.|+.-
T Consensus 253 ---------------------~------------------~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~ 293 (703)
T PRK15489 253 ---------------------M------------------KERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFR 293 (703)
T ss_pred ---------------------H------------------HhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEecccc
Confidence 0 133 58889999999999999999999999321
Q ss_pred ----------------CCCeeEeccCcCHHHHHHhhHHHhcccc-hhh
Q 004692 469 ----------------SRPQFLGTSTTNLNDVLIQGTRWASGLI-DVS 499 (736)
Q Consensus 469 ----------------~~~~~~g~aP~tl~~~l~Qr~RWa~G~~-qi~ 499 (736)
...+.++..|.|++..++||.||..|-. |-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 294 VRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred ccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 0256778899999999999999999988 654
No 29
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.93 E-value=1.5e-25 Score=224.85 Aligned_cols=193 Identities=16% Similarity=0.185 Sum_probs=153.4
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccc
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~ 174 (736)
|.|+|+||+ |||+ ..+.++|.|+++++||. ++|+|+|||++|.|.+.+.+..+ +
T Consensus 1 p~vsviip~---~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPL---CGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEec---CCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 789999999 9998 46899999999999997 89999999999977643322110 0
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEE
Q 004692 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
||.+ .+.++
T Consensus 55 ------------------------------------------------~~~~-----------------------~~~~~ 63 (196)
T cd02520 55 ------------------------------------------------YPNV-----------------------DARLL 63 (196)
T ss_pred ------------------------------------------------CCCC-----------------------cEEEE
Confidence 0000 13344
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCc
Q 004692 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d 334 (736)
...++.| ..+|++|+|.|++. ++||+++++|+|+.++ |++|.+++..+.+++ ++.|++.
T Consensus 64 ~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~---------- 122 (196)
T cd02520 64 IGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL---------- 122 (196)
T ss_pred ecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee----------
Confidence 4433322 34799999999998 8899999999999865 999999999887766 7888753
Q ss_pred hhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccch
Q 004692 335 IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLS 414 (736)
Q Consensus 335 ~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 414 (736)
...|+++++||+++.
T Consensus 123 -----------------------~~~g~~~~~r~~~~~------------------------------------------ 137 (196)
T cd02520 123 -----------------------CAFGKSMALRREVLD------------------------------------------ 137 (196)
T ss_pred -----------------------cccCceeeeEHHHHH------------------------------------------
Confidence 456889999999982
Q ss_pred hhHHhhccccccceeeccccccccccccC--CCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHh
Q 004692 415 NVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (736)
Q Consensus 415 ~~~~~~~~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa 492 (736)
+.+||+. ..+.||++.++++.++||++.|+++ +.++...|++++++++||.||+
T Consensus 138 ----------------------~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~ 193 (196)
T cd02520 138 ----------------------AIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWS 193 (196)
T ss_pred ----------------------hccChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHh
Confidence 2356764 3568999999999999999999986 6888999999999999999998
Q ss_pred cc
Q 004692 493 SG 494 (736)
Q Consensus 493 ~G 494 (736)
+.
T Consensus 194 ~~ 195 (196)
T cd02520 194 RT 195 (196)
T ss_pred cc
Confidence 64
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.93 E-value=1.6e-24 Score=219.72 Aligned_cols=222 Identities=22% Similarity=0.233 Sum_probs=162.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||| |||+ +.+.+||.|++.++||.++++|+|+|||++|.|.+.+....
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~-------------------------- 50 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAA-------------------------- 50 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHH--------------------------
Confidence 68999 9998 88999999999999999899999999999997754322000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
....+++.++.++.
T Consensus 51 ------------------------------------------------------------------~~~~~~v~~~~~~~ 64 (229)
T cd04192 51 ------------------------------------------------------------------AKPNFQLKILNNSR 64 (229)
T ss_pred ------------------------------------------------------------------hCCCcceEEeeccC
Confidence 00112355555432
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhh
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG 338 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~ 338 (736)
+ ...+|+.++|.+++. +++|+|+++|+|+++ .|++|++++..|.++. .+.|+++..+... +.....
T Consensus 65 -~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~-~~~~l~~l~~~~~~~~----~~~v~~~~~~~~~--~~~~~~ 130 (229)
T cd04192 65 -V--SISGKKNALTTAIKA----AKGDWIVTTDADCVV-PSNWLLTFVAFIQKEQ----IGLVAGPVIYFKG--KSLLAK 130 (229)
T ss_pred -c--ccchhHHHHHHHHHH----hcCCEEEEECCCccc-CHHHHHHHHHHhhcCC----CcEEeeeeeecCC--ccHHHH
Confidence 1 256899999999998 889999999999986 5999999999886654 6778887766521 111111
Q ss_pred --hhhh-hhhhhHhhhhhcCCc-cccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccch
Q 004692 339 --SLRS-GYRLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLS 414 (736)
Q Consensus 339 --~~~~-f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 414 (736)
.... +......+..+.+.+ .+.|++.++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------------ 168 (229)
T cd04192 131 FQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFF------------------------------------------ 168 (229)
T ss_pred HHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHH------------------------------------------
Confidence 1111 111112223334443 456888899999982
Q ss_pred hhHHhhccccccceeeccccccccccccC--CCccchHHHHHHHHHCCc-EEEEeCCCCCeeEeccCcCHHHHHHhhHHH
Q 004692 415 NVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGW-TSTYLDPSRPQFLGTSTTNLNDVLIQGTRW 491 (736)
Q Consensus 415 ~~~~~~~~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gw-rs~y~~~~~~~~~g~aP~tl~~~l~Qr~RW 491 (736)
+.+||+. ...+||.+..++++++|| ++.|++..........|++++++++||+||
T Consensus 169 ----------------------~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw 226 (229)
T cd04192 169 ----------------------EVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRW 226 (229)
T ss_pred ----------------------HhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHh
Confidence 2467874 467899999999999999 999986544678899999999999999999
Q ss_pred hcc
Q 004692 492 ASG 494 (736)
Q Consensus 492 a~G 494 (736)
++|
T Consensus 227 ~~g 229 (229)
T cd04192 227 ASK 229 (229)
T ss_pred hcC
Confidence 998
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.92 E-value=3e-24 Score=219.64 Aligned_cols=229 Identities=18% Similarity=0.140 Sum_probs=160.8
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccc
Q 004692 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (736)
Q Consensus 96 ~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~y 175 (736)
+|+|+||| |||+++.+.+|+.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~---~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPV---YDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEee---cCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 48999999 9998789999999999999 4 5799999999986543221100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEe
Q 004692 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVS 255 (736)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~ 255 (736)
..+.+.++.
T Consensus 51 -----------------------------------------------------------------------~~~~~~v~~ 59 (235)
T cd06434 51 -----------------------------------------------------------------------KYGGIFVIT 59 (235)
T ss_pred -----------------------------------------------------------------------cCCcEEEEe
Confidence 001233332
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCch
Q 004692 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDI 335 (736)
Q Consensus 256 R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~ 335 (736)
++ +++|++|+|.|++. +++|+|+++|+|..++ |++|++++..|.|++ ++.|++.+...+.+ ...
T Consensus 60 -~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~----v~~v~~~~~~~~~~-~~~ 123 (235)
T cd06434 60 -VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDPK----VGGVGTNQRILRPR-DSK 123 (235)
T ss_pred -cC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCCC----EeEEcCceEeecCc-ccH
Confidence 22 56899999999998 8999999999999965 999999999998766 99999988777642 122
Q ss_pred hhhhhhhhhhh----hHhhhhhcCCc-cccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCC
Q 004692 336 YDGSLRSGYRL----QWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (736)
Q Consensus 336 ~~~~~~~f~~~----~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 410 (736)
+......++.. ........++. ...|...++||+++..... ...|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~---------------~~~~~-------------- 174 (235)
T cd06434 124 WSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLF---------------LEEFT-------------- 174 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhh---------------HHHhh--------------
Confidence 22111112211 11122222322 2457777899999832000 00000
Q ss_pred ccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHH
Q 004692 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~R 490 (736)
.+.+|.......||.+++.+++++||+..|++. +.+...+|+++.++++||.|
T Consensus 175 -------------------------~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~R 227 (235)
T cd06434 175 -------------------------NETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKFLKQQLR 227 (235)
T ss_pred -------------------------hhhhcCCCCCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHHHHHhhh
Confidence 001221224678999999999999999999986 67888899999999999999
Q ss_pred Hhcccch
Q 004692 491 WASGLID 497 (736)
Q Consensus 491 Wa~G~~q 497 (736)
|++|..+
T Consensus 228 w~~~~~~ 234 (235)
T cd06434 228 WSRSNWR 234 (235)
T ss_pred hhhcccC
Confidence 9999864
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.92 E-value=9.5e-24 Score=218.63 Aligned_cols=228 Identities=19% Similarity=0.206 Sum_probs=166.8
Q ss_pred CCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCC
Q 004692 88 LPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGI 167 (736)
Q Consensus 88 l~~~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v 167 (736)
.+..+..|+|+|+||+ |||+ +.+.+++.++.+++||.++++|+|+|||++|.|.+.+.+
T Consensus 22 ~~~~~~~~~isVvip~---~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~----------------- 80 (251)
T cd06439 22 LPDPAYLPTVTIIIPA---YNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE----------------- 80 (251)
T ss_pred CCCCCCCCEEEEEEec---CCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH-----------------
Confidence 3345678999999999 9998 789999999999999998899999999999976532211
Q ss_pred ccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccC
Q 004692 168 KTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVE 247 (736)
Q Consensus 168 ~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~ 247 (736)
+.+ .
T Consensus 81 ---------------------------------~~~-------------------------------------------~ 84 (251)
T cd06439 81 ---------------------------------YAD-------------------------------------------K 84 (251)
T ss_pred ---------------------------------Hhh-------------------------------------------C
Confidence 100 0
Q ss_pred cCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCcee
Q 004692 248 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKF 327 (736)
Q Consensus 248 ~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f 327 (736)
++.++..++ +.+|++|+|.+++. +++|+|+++|+|.+++ |+++.+++..+.+++ +++|++....
T Consensus 85 --~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~ 148 (251)
T cd06439 85 --GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADPS----VGAVSGELVI 148 (251)
T ss_pred --cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCCC----ccEEEeEEEe
Confidence 134554433 45799999999999 8899999999999975 999999999997665 8888876665
Q ss_pred ccCCCCchhhhh-hhhhhhhhHhhhhhcCC-ccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccc
Q 004692 328 HNFNEHDIYDGS-LRSGYRLQWPGMDGLKG-PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH 405 (736)
Q Consensus 328 ~n~~~~d~~~~~-~~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~ 405 (736)
.+.+. ...... ...+...........+. ....|++.++||+++.
T Consensus 149 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~--------------------------------- 194 (251)
T cd06439 149 VDGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR--------------------------------- 194 (251)
T ss_pred cCCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc---------------------------------
Confidence 54321 011111 01111111111111222 2234444568888771
Q ss_pred cccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHH
Q 004692 406 KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVL 485 (736)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l 485 (736)
||+.....||.++++++..+||++.|+++ +......|.+..+++
T Consensus 195 ----------------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~ 238 (251)
T cd06439 195 ----------------------------------PLPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEF 238 (251)
T ss_pred ----------------------------------CCCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHH
Confidence 44555668999999999999999999986 789999999999999
Q ss_pred HhhHHHhcccchh
Q 004692 486 IQGTRWASGLIDV 498 (736)
Q Consensus 486 ~Qr~RWa~G~~qi 498 (736)
+|+.||+.|++|.
T Consensus 239 ~~~~r~~~g~~~~ 251 (251)
T cd06439 239 RRRVRIAAGNLQA 251 (251)
T ss_pred HHHHHHHhccccC
Confidence 9999999999983
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.91 E-value=3.3e-22 Score=222.00 Aligned_cols=229 Identities=20% Similarity=0.128 Sum_probs=157.0
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
++..|+|+|+||+ |||+ +.+.+|+.|+++++||. +++|+|+||||+|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa---~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPA---RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEec---CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 4678999999999 9998 78999999999999996 489999999999987643322110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
. +| ..++
T Consensus 94 -----------------------------~----------------------~~----------------------~~~~ 100 (384)
T TIGR03469 94 -----------------------------A----------------------YG----------------------RGDR 100 (384)
T ss_pred -----------------------------h----------------------cC----------------------CCCc
Confidence 0 00 0013
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC-----CCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCc
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 325 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~-----g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq 325 (736)
++++..+.+|. ...+|+.|+|.|++. ++ +|+++++|||+.+ +|+.+++++..+.+++ +++|....
T Consensus 101 i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~-~p~~l~~lv~~~~~~~----~~~vs~~~ 170 (384)
T TIGR03469 101 LTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAH-GPDNLARLVARARAEG----LDLVSLMV 170 (384)
T ss_pred EEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCC-ChhHHHHHHHHHHhCC----CCEEEecc
Confidence 45554333221 256899999999998 56 9999999999986 5999999999987654 45565433
Q ss_pred eeccCCCCchhhhh----hhhhhhhhH---hhhhhc-CCccccccccceehhhccCCccccccchHhhHhhhcCchhHHh
Q 004692 326 KFHNFNEHDIYDGS----LRSGYRLQW---PGMDGL-KGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIK 397 (736)
Q Consensus 326 ~f~n~~~~d~~~~~----~~~f~~~~~---~g~d~~-~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~ 397 (736)
++.. .+.+.+. ...++.... ...+.. ......|.+.++||+++.
T Consensus 171 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~------------------------- 222 (384)
T TIGR03469 171 RLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALE------------------------- 222 (384)
T ss_pred cccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHH-------------------------
Confidence 3321 1111111 011111100 011111 112346888899999982
Q ss_pred hhhhhccccccCCccchhhHHhhccccccceeeccccccccccccC--CCccchHHHHHHHHHCCcEEEEeCCCCCeeEe
Q 004692 398 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLG 475 (736)
Q Consensus 398 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g 475 (736)
+.|||+. ..+.||++++.++.++|+++.+.... .....
T Consensus 223 ---------------------------------------~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~ 262 (384)
T TIGR03469 223 ---------------------------------------RIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSL 262 (384)
T ss_pred ---------------------------------------HcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEE
Confidence 2467775 57899999999999999999998653 33344
Q ss_pred ccCcCHHHHHHhhHHHh
Q 004692 476 TSTTNLNDVLIQGTRWA 492 (736)
Q Consensus 476 ~aP~tl~~~l~Qr~RWa 492 (736)
..-+++.+.++|+.||+
T Consensus 263 r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 263 RPYDGLGEIWRMIARTA 279 (384)
T ss_pred EecCCHHHHHHHHHHhH
Confidence 45579999999999995
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=3.1e-20 Score=202.34 Aligned_cols=344 Identities=17% Similarity=0.178 Sum_probs=219.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHH--HHHHHHHHHhhhheeecccc-CC----C-CCCC
Q 004692 18 IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASEL--LLSFIWLLGRAYLWRPVSRT-VF----P-ERLP 89 (736)
Q Consensus 18 ~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~--~~~~~~~l~~~~~~~p~~r~-~~----~-~~l~ 89 (736)
.+.|.+.+...++....-.|-....++.......=..++.+++-+ |.+..+.......+--+.++ .+ | +++|
T Consensus 62 ~lRR~~L~~~tla~tv~at~~m~~vl~~gG~~~le~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~~p~p 141 (736)
T COG2943 62 TLRRYILLGLTLAQTVVATWYMKTVLPYGGPYMLEAGILVLFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPNEPLP 141 (736)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCCCCCC
Confidence 367888877777777766666666665432211112222222211 11111111111112112221 11 1 1121
Q ss_pred CCCCCCceEEEEecCCCCCCchHHHHHHH----HHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhc
Q 004692 90 EDDKLPAIDVFICTADPEKEPAIGVMNTV----LSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (736)
Q Consensus 90 ~~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv----~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~ 165 (736)
..-+-.|++|+ |||++.-|..-+ +|+.+- =-.+.+.++|+.|..++.- ++.|. +.|..+|++.
T Consensus 142 ---~~hrTAilmPi---ynEd~~rVfAgLrA~~eSla~T-g~~~~FD~FVLSDs~dpdi--alAEq----~a~~~l~~e~ 208 (736)
T COG2943 142 ---DLHRTAILMPI---YNEDVNRVFAGLRATYESLAAT-GHAEHFDFFVLSDSRDPDI--ALAEQ----KAWAELCREL 208 (736)
T ss_pred ---cccceeEEeec---cccCHHHHHHHHHHHHHHHHhh-CCcccceEEEEcCCCCchh--hhhHH----HHHHHHHHHh
Confidence 23357899999 999987665444 444333 3445799999999998732 23333 2244444443
Q ss_pred CCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccc
Q 004692 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADL 245 (736)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~ 245 (736)
+=+
T Consensus 209 ~g~----------------------------------------------------------------------------- 211 (736)
T COG2943 209 GGE----------------------------------------------------------------------------- 211 (736)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 310
Q ss_pred cCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCc
Q 004692 246 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 325 (736)
Q Consensus 246 ~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq 325 (736)
-++-|-.|.+ |-+.||||+..-.|..| +..++++++|||+++. +|.+-+++..|. .+++.|.+||-.
T Consensus 212 ---~~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME---~~P~aGlIQt~P 278 (736)
T COG2943 212 ---GNIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLME---ANPDAGLIQTSP 278 (736)
T ss_pred ---CceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHh---hCCCCceeecch
Confidence 0234444433 36789999999999988 8899999999999986 999999999885 334499999865
Q ss_pred eeccCCCCchhhhhhh----hhhhhhHhhhhhcCC--ccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhh
Q 004692 326 KFHNFNEHDIYDGSLR----SGYRLQWPGMDGLKG--PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSL 399 (736)
Q Consensus 326 ~f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~ 399 (736)
.-.|. +..|++.+. ++=.....|..-|++ ..|-|.|+++|.++...
T Consensus 279 ~~~gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~-------------------------- 330 (736)
T COG2943 279 KASGG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE-------------------------- 330 (736)
T ss_pred hhcCc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH--------------------------
Confidence 55543 345655433 333456678888875 46889999999999843
Q ss_pred hhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCc
Q 004692 400 HQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 479 (736)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~ 479 (736)
+|+... .-..+.|.++.++.|+.-+-.|.+.||.+--.++ ..-.+++.|.
T Consensus 331 --------------------------hcgLp~---LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~d-L~GSyEE~Pp 380 (736)
T COG2943 331 --------------------------HCGLPP---LPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYD-LDGSYEELPP 380 (736)
T ss_pred --------------------------hcCCCC---CCCCCCCCccccchHHHHHHHHhhcCceEEEecc-CCCchhhCCc
Confidence 011100 0013458888999999999999999997654443 5688999999
Q ss_pred CHHHHHHhhHHHhcccchhhhhhcCCcccCCCCCchhHHHHHHHHhHhh
Q 004692 480 NLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFP 528 (736)
Q Consensus 480 tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~ 528 (736)
|+.+++++-+|||+|++|.+. ++. .+++++..|+.++...+.+
T Consensus 381 nLlD~l~RDRRWC~GNLqh~r-----l~~-~~GlHwvsR~h~~tGVmsY 423 (736)
T COG2943 381 NLLDELKRDRRWCHGNLQHFR-----LFL-VKGLHWVSRAHFLTGVMSY 423 (736)
T ss_pred hHHHHHhhhhHhhhcchhhce-----eec-cCCccHHHHHHHHHHHHHH
Confidence 999999999999999999774 333 4799999997666554444
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.87 E-value=1.1e-20 Score=193.98 Aligned_cols=224 Identities=15% Similarity=0.094 Sum_probs=159.9
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccc
Q 004692 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (736)
Q Consensus 96 ~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~y 175 (736)
+++|+||+ |||+ +.+.+++.++.+++||..+.+|+|+|||++|.|.+.+.+..
T Consensus 1 ~~sIiip~---~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPV---RNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEc---CCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 48999999 9998 68899999999999997789999999999996643221110
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEe
Q 004692 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVS 255 (736)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~ 255 (736)
...|.+.++.
T Consensus 54 ----------------------------------------------------------------------~~~~~v~~i~ 63 (249)
T cd02525 54 ----------------------------------------------------------------------AKDPRIRLID 63 (249)
T ss_pred ----------------------------------------------------------------------hcCCeEEEEe
Confidence 0013456664
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCch
Q 004692 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDI 335 (736)
Q Consensus 256 R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~ 335 (736)
.+ .+++++|+|.|++. +++|+++++|+|.++ +|++|.+++..+.+++ ...|+++....+. +.
T Consensus 64 ~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~-~~~~l~~~~~~~~~~~----~~~v~~~~~~~~~---~~ 125 (249)
T cd02525 64 NP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVY-PKDYILELVEALKRTG----ADNVGGPMETIGE---SK 125 (249)
T ss_pred CC------CCCchHHHHHHHHH----hCCCEEEEECCCccC-CHHHHHHHHHHHhcCC----CCEEecceecCCC---Ch
Confidence 32 34689999999998 899999999999986 5999999998887665 4556554332221 22
Q ss_pred hhhhhhh----hhhhhHhhhhhcC---CccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhcccccc
Q 004692 336 YDGSLRS----GYRLQWPGMDGLK---GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 408 (736)
Q Consensus 336 ~~~~~~~----f~~~~~~g~d~~~---~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~ 408 (736)
+...... .+........... .....|.+.++||+++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 169 (249)
T cd02525 126 FQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFE------------------------------------ 169 (249)
T ss_pred HHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHH------------------------------------
Confidence 2111110 0111000011111 22456777789999872
Q ss_pred CCccchhhHHhhccccccceeeccccccccccccCC-CccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHh
Q 004692 409 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQ 487 (736)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Q 487 (736)
+.+||+.. ...||.+.+++++++|+++.|+++ +.+....|.+++++.+|
T Consensus 170 ----------------------------~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~~ 219 (249)
T cd02525 170 ----------------------------KVGGFDESLVRNEDAELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLARQ 219 (249)
T ss_pred ----------------------------HhCCCCcccCccchhHHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHHH
Confidence 12456554 347999999999999999999986 67788889999999999
Q ss_pred hHHHhcccchhhh
Q 004692 488 GTRWASGLIDVSI 500 (736)
Q Consensus 488 r~RWa~G~~qi~~ 500 (736)
+.||+.|..|...
T Consensus 220 ~~r~~~~~~~~~~ 232 (249)
T cd02525 220 YFRYGKWRARTLR 232 (249)
T ss_pred HHHHhhhhHHHHH
Confidence 9999999999987
No 36
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.80 E-value=2.4e-19 Score=177.68 Aligned_cols=161 Identities=22% Similarity=0.172 Sum_probs=113.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.++++++||.++++|+|+|||++|.|.+.+.+ ++
T Consensus 1 VvIp~---~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~--------------~~------------ 50 (183)
T cd06438 1 ILIPA---HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA--------------AG------------ 50 (183)
T ss_pred CEEec---cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH--------------cC------------
Confidence 68999 9998 899999999999999988899999999999976532110 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
..++.+.+
T Consensus 51 ------------------------------------------------------------------------~~~~~~~~ 58 (183)
T cd06438 51 ------------------------------------------------------------------------ATVLERHD 58 (183)
T ss_pred ------------------------------------------------------------------------CeEEEeCC
Confidence 01122222
Q ss_pred CCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhh
Q 004692 259 SPEHLHHFKGGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~-~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~ 337 (736)
. ++.+|++|+|.+++.+. .-+++|+++++|+|++++ |+++.+++..|.+. ...||+.....+... ..+.
T Consensus 59 ~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~-~~~~ 128 (183)
T cd06438 59 P---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNPDD-SWIT 128 (183)
T ss_pred C---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCCcc-CHHH
Confidence 1 25689999999998731 014699999999999965 99999999988642 246777666555322 2222
Q ss_pred hhh----hhhhhhhHhhhhhcCCc-cccccccceehhhc
Q 004692 338 GSL----RSGYRLQWPGMDGLKGP-FLTGTGHYIRRESL 371 (736)
Q Consensus 338 ~~~----~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL 371 (736)
... ..++.....++..+++. .+.|+|.++||+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 129 RLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 222 12233444566666654 46899999999999
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.80 E-value=4.5e-19 Score=177.61 Aligned_cols=164 Identities=18% Similarity=0.129 Sum_probs=119.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+||.|+++++ | +++|+|+|||++|.|.+.+. . +
T Consensus 1 ViIp~---~Ne~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~-~-~------------------------- 46 (191)
T cd06436 1 VLVPC---LNEE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR-L-A------------------------- 46 (191)
T ss_pred CEEec---cccH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh-h-e-------------------------
Confidence 68999 9998 79999999999999 5 48999999999997764221 0 0
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
...+++.++.++.
T Consensus 47 -------------------------------------------------------------------~~~~~v~~i~~~~ 59 (191)
T cd06436 47 -------------------------------------------------------------------ITDSRVHLLRRHL 59 (191)
T ss_pred -------------------------------------------------------------------ecCCcEEEEeccC
Confidence 0012356665532
Q ss_pred CCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCC
Q 004692 259 SPEHLHHFKGGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~-------~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~ 331 (736)
.. .+.+|++|+|.|++.+. .-.++|+|+++|+|..++ |++|++++.+|.||+ ++.||++.++.|..
T Consensus 60 ~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~ 132 (191)
T cd06436 60 PN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDPR----VAGTQSRVRMYNRH 132 (191)
T ss_pred Cc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCCc----eEEEeeeEEEecCC
Confidence 11 24689999999999731 011358999999999965 999999888888776 99999999888753
Q ss_pred CCchhhh----hhhhhhhhhHhhhhhcCCccccccccceehhhc
Q 004692 332 EHDIYDG----SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 371 (736)
Q Consensus 332 ~~d~~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 371 (736)
.+ .+.. +...++..++.++...+...++|+|++|||++|
T Consensus 133 ~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 133 KN-LLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 22 2222 122234566777777776667899999999999
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.75 E-value=1.1e-17 Score=167.04 Aligned_cols=137 Identities=29% Similarity=0.402 Sum_probs=110.4
Q ss_pred EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhh----hHhhhhhcCC-cccc
Q 004692 286 YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRL----QWPGMDGLKG-PFLT 360 (736)
Q Consensus 286 ~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~-~~~~ 360 (736)
+|+++|||+.++ ||++++++.++.||+ +++||+|..+.|. ++.+.+-+...+.. .....+..+. ....
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~~----~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDPK----VDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCCC----ceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999975 999999999998776 9999999998743 34455444444421 1222233444 3467
Q ss_pred ccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccchhhHHhhccccccceeecccccccccc
Q 004692 361 GTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG 440 (736)
Q Consensus 361 Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G 440 (736)
|+|.++||+++. +.+|
T Consensus 74 G~~~~~r~~~l~----------------------------------------------------------------~vg~ 89 (193)
T PF13632_consen 74 GSGMLFRREALR----------------------------------------------------------------EVGG 89 (193)
T ss_pred CcceeeeHHHHH----------------------------------------------------------------HhCc
Confidence 999999999992 2358
Q ss_pred cc-CCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhccc
Q 004692 441 FS-YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGL 495 (736)
Q Consensus 441 ~~-~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~ 495 (736)
|+ ..+++||+++++++.++||++.|+++ +.+++.+|+|+.++++||+||..|.
T Consensus 90 ~~~~~~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 90 FDDPFSIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred ccccccccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 99 88999999999999999999999986 5789999999999999999999998
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.75 E-value=2.7e-17 Score=164.14 Aligned_cols=193 Identities=16% Similarity=0.159 Sum_probs=133.5
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccc
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+.+.+.+|+.|+++++||. .+|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsiii~~---~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPV---YNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEec---ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 789999999 9998678999999999999986 789999999998654322211
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEE
Q 004692 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
+.+ ..+++.++
T Consensus 53 --------------------------~~~-------------------------------------------~~~~~~~~ 63 (202)
T cd04184 53 --------------------------YAA-------------------------------------------QDPRIKVV 63 (202)
T ss_pred --------------------------HHh-------------------------------------------cCCCEEEE
Confidence 100 01234555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCCC
Q 004692 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEH 333 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq~f~n~~~~ 333 (736)
..++ +.+++.|+|.|++. +++|+++++|+|.++ +|+++.+++..+ .+|+ +++|.+.......+.
T Consensus 64 ~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~-~~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~- 128 (202)
T cd04184 64 FREE-----NGGISAATNSALEL----ATGEFVALLDHDDEL-APHALYEVVKALNEHPD----ADLIYSDEDKIDEGG- 128 (202)
T ss_pred Eccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcC-ChHHHHHHHHHHHhCCC----CCEEEccHHhccCCC-
Confidence 4433 46899999999998 889999999999986 599999999988 5565 677765443322110
Q ss_pred chhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccc
Q 004692 334 DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 413 (736)
Q Consensus 334 d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
.... ..+..... .+......+.|.++++||+++.
T Consensus 129 ~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~----------------------------------------- 162 (202)
T cd04184 129 KRSE----PFFKPDWS-PDLLLSQNYIGHLLVYRRSLVR----------------------------------------- 162 (202)
T ss_pred CEec----cccCCCCC-HHHhhhcCCccceEeEEHHHHH-----------------------------------------
Confidence 0000 00000000 0111122345677789999982
Q ss_pred hhhHHhhccccccceeeccccccccccccCC-CccchHHHHHHHHHCCcEEEEeCC
Q 004692 414 SNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.+ ...||.+.++|++.+||+..|+++
T Consensus 163 -----------------------~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 163 -----------------------QVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred -----------------------HhCCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 23567765 357999999999999999999986
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.71 E-value=2.4e-16 Score=157.41 Aligned_cols=189 Identities=17% Similarity=0.172 Sum_probs=131.4
Q ss_pred EEEEecCCCCCCc-hHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccc
Q 004692 98 DVFICTADPEKEP-AIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (736)
Q Consensus 98 dV~Ipt~~p~nE~-~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf 176 (736)
+|+||| |||+ ++.+.+|+.|+++++||. .+|+|+|||+++.+...+.+
T Consensus 1 sviip~---~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~-------------------------- 49 (201)
T cd04195 1 SVLMSV---YIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE-------------------------- 49 (201)
T ss_pred CEEEEc---cccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH--------------------------
Confidence 589999 8886 478999999999999995 57999999995432211111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEec
Q 004692 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSR 256 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R 256 (736)
.|.+ ..| +.++..
T Consensus 50 -----------------------~~~~-------------------------------------------~~~-i~~i~~ 62 (201)
T cd04195 50 -----------------------EFKR-------------------------------------------KLP-LKVVPL 62 (201)
T ss_pred -----------------------HHHh-------------------------------------------cCC-eEEEEc
Confidence 1100 012 566666
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCCCch
Q 004692 257 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDI 335 (736)
Q Consensus 257 ~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n~~~~d~ 335 (736)
++ +.|+++|+|.|++. ++||+|+++|+|.+++ |+++.+++..|. +|+ +++|.+.....+.+....
T Consensus 63 ~~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 128 (201)
T cd04195 63 EK-----NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKNPE----IDIVGGGVLEFDSDGNDI 128 (201)
T ss_pred Cc-----cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhCCC----eEEEcccEEEECCCCCee
Confidence 54 35899999999998 8999999999999865 999999999885 344 788887665543322111
Q ss_pred hhhh----hhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCc
Q 004692 336 YDGS----LRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGE 411 (736)
Q Consensus 336 ~~~~----~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 411 (736)
.... ....... ......++|.+.++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~rr~~~~--------------------------------------- 163 (201)
T cd04195 129 GKRRLPTSHDDILKF------ARRRSPFNHPTVMFRKSKVL--------------------------------------- 163 (201)
T ss_pred ccccCCCCHHHHHHH------hccCCCCCChHHhhhHHHHH---------------------------------------
Confidence 1100 0011111 01122345667789999872
Q ss_pred cchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCC
Q 004692 412 NLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 412 ~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.....||.++..++..+|+++.|+++
T Consensus 164 -------------------------~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 164 -------------------------AVGGYQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred -------------------------HcCCcCCCCCchHHHHHHHHHHcCCceecccH
Confidence 24678877889999999999999999999875
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.68 E-value=1.5e-15 Score=162.60 Aligned_cols=110 Identities=17% Similarity=0.061 Sum_probs=87.7
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccccc
Q 004692 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~ 177 (736)
+|+||+ |||+++.+.+||.|+++++||....+|+|+||||+|.|.+.+.+..
T Consensus 1 SIIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~------------------------- 52 (299)
T cd02510 1 SVIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY------------------------- 52 (299)
T ss_pred CEEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH-------------------------
Confidence 589999 9998789999999999999987667999999999997764322100
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEecc
Q 004692 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
. ....|.+.++..+
T Consensus 53 -----------------------~-------------------------------------------~~~~~~v~vi~~~ 66 (299)
T cd02510 53 -----------------------Y-------------------------------------------KKYLPKVKVLRLK 66 (299)
T ss_pred -----------------------H-------------------------------------------hhcCCcEEEEEcC
Confidence 0 0012346777554
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004692 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D 311 (736)
+ +.|++.|.|.|++. ++||+|+++|+|+.+ +|++|.+++..+.+
T Consensus 67 ~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~-~~~wL~~ll~~l~~ 110 (299)
T cd02510 67 K-----REGLIRARIAGARA----ATGDVLVFLDSHCEV-NVGWLEPLLARIAE 110 (299)
T ss_pred C-----CCCHHHHHHHHHHH----ccCCEEEEEeCCccc-CccHHHHHHHHHHh
Confidence 4 46899999999999 899999999999997 59999999998864
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.67 E-value=1.3e-15 Score=150.30 Aligned_cols=186 Identities=17% Similarity=0.111 Sum_probs=128.9
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccccc
Q 004692 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~ 177 (736)
+|+||+ |||+ +.+.+|+.|+.+++||. ++|+|+|||++|.|.+.+.+.
T Consensus 1 sivi~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~-------------------------- 48 (202)
T cd06433 1 SIITPT---YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKY-------------------------- 48 (202)
T ss_pred CEEEec---cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHh--------------------------
Confidence 489999 9998 79999999999999986 899999999999765322110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEecc
Q 004692 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
.+ ...++..+
T Consensus 49 ------------------------~~----------------------------------------------~~~~~~~~ 58 (202)
T cd06433 49 ------------------------ED----------------------------------------------KITYWISE 58 (202)
T ss_pred ------------------------Hh----------------------------------------------hcEEEEec
Confidence 00 01233333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCCCchh
Q 004692 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq~f~n~~~~d~~ 336 (736)
+ ..++++|+|.|++. +++|+|+++|+|.++. |+.+.+++..+ .+++ .++|.+...+.+.+.....
T Consensus 59 ~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~~----~~~v~g~~~~~~~~~~~~~ 124 (202)
T cd06433 59 P-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHPE----VDVVYGDVLLVDENGRVIG 124 (202)
T ss_pred C-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCCC----ccEEEeeeEEEcCCCCccc
Confidence 3 45899999999999 8999999999999975 89999988444 4544 6677666554432221111
Q ss_pred hhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccchhh
Q 004692 337 DGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNV 416 (736)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 416 (736)
... ...............+|++.++||+++.
T Consensus 125 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 155 (202)
T cd06433 125 RRR-----PPPFLDKFLLYGMPICHQATFFRRSLFE-------------------------------------------- 155 (202)
T ss_pred CCC-----CcchhhhHHhhcCcccCcceEEEHHHHH--------------------------------------------
Confidence 000 0001111222344567788899999882
Q ss_pred HHhhccccccceeeccccccccccccCC-CccchHHHHHHHHHCCcEEEEeCC
Q 004692 417 LQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 417 ~~~~~~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.+ ...||.+..+++.++|++..|+++
T Consensus 156 --------------------~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 156 --------------------KYGGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred --------------------HhCCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 12346554 568999999999999999998875
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.66 E-value=6.1e-15 Score=153.16 Aligned_cols=123 Identities=14% Similarity=0.108 Sum_probs=89.0
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCc
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p 172 (736)
..|+|+|+||+ |||+ +.+..++.++.+...+...++|+|+||||+|.|.+.+.+..
T Consensus 7 ~~~~vsVvIp~---yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~-------------------- 62 (243)
T PLN02726 7 GAMKYSIIVPT---YNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQ-------------------- 62 (243)
T ss_pred CCceEEEEEcc---CCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHH--------------------
Confidence 45899999999 9998 67788888776543222368999999999998865332211
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEE
Q 004692 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
+.| .-+++.
T Consensus 63 --------------------------~~~---------------------------------------------~~~~v~ 71 (243)
T PLN02726 63 --------------------------KVY---------------------------------------------GEDRIL 71 (243)
T ss_pred --------------------------Hhc---------------------------------------------CCCcEE
Confidence 000 001244
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004692 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 324 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~p 324 (736)
++.+++ +.+|++|+|.|++. ++||+|+++|+|... +|+.|.+++..+.+++ .++|.+.
T Consensus 72 ~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~l~~~~~~~~----~~~v~g~ 129 (243)
T PLN02726 72 LRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSH-HPKYLPSFIKKQRETG----ADIVTGT 129 (243)
T ss_pred EEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCC-CHHHHHHHHHHHHhcC----CcEEEEc
Confidence 554433 45799999999998 899999999999985 5999999998886544 4556554
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.65 E-value=4.5e-15 Score=148.86 Aligned_cols=193 Identities=17% Similarity=0.150 Sum_probs=130.2
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccccc
Q 004692 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+ ..+.+|+.|+++++|| +++|+|+|||++|.|.+.+.+.++ +
T Consensus 1 sIvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~----------~------------- 51 (214)
T cd04196 1 AVLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID----------K------------- 51 (214)
T ss_pred CEEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh----------c-------------
Confidence 589999 9998 7899999999999999 489999999999987653322110 0
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEecc
Q 004692 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
|| +.+.++..+
T Consensus 52 ---------------------------------------------~~------------------------~~~~~~~~~ 62 (214)
T cd04196 52 ---------------------------------------------DP------------------------FIIILIRNG 62 (214)
T ss_pred ---------------------------------------------CC------------------------ceEEEEeCC
Confidence 00 123444443
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCCCchh
Q 004692 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq~f~n~~~~d~~ 336 (736)
+ .+|+++|+|.+++. ++||+|+++|+|.+.. |+.|.+++..+ .++. .+++.+.....+.+.. ..
T Consensus 63 ~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~ 127 (214)
T cd04196 63 K-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDDK----PLLVYSDLELVDENGN-PI 127 (214)
T ss_pred C-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCCC----ceEEecCcEEECCCCC-Cc
Confidence 3 56899999999998 8999999999999865 99999999884 4443 6777776554332111 11
Q ss_pred hhhhhhhhhh--hHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccch
Q 004692 337 DGSLRSGYRL--QWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLS 414 (736)
Q Consensus 337 ~~~~~~f~~~--~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 414 (736)
.......... ..............|+++++||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~------------------------------------------ 165 (214)
T cd04196 128 GESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLE------------------------------------------ 165 (214)
T ss_pred ccccccccccCCccCHHHHHHhCccCCceeeEEHHHHH------------------------------------------
Confidence 1100000000 00111112234567888999999882
Q ss_pred hhHHhhccccccceeeccccccccccccCC-CccchHHHHHHHHHCCcEEEEeCC
Q 004692 415 NVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 415 ~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.++++.. ...||....+++.. |++..|+++
T Consensus 166 ----------------------~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 166 ----------------------LALPFPDADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred ----------------------hhccccccccccchHHHHHHHHH-cCceEEcch
Confidence 12456555 67899999998877 668888875
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.61 E-value=1.6e-14 Score=146.21 Aligned_cols=178 Identities=19% Similarity=0.111 Sum_probs=120.3
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccc
Q 004692 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (736)
Q Consensus 97 VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf 176 (736)
|+|+||+ |||+ +.+.+|+.|++++.|+ ..+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~---~n~~-~~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPT---LNEA-ENLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEc---cCcH-HHHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHHhc--------------------------
Confidence 6899999 9998 5899999999999995 478999999999865421100
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEec
Q 004692 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSR 256 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R 256 (736)
+.+.++..
T Consensus 49 ------------------------------------------------------------------------~~~~~~~~ 56 (221)
T cd02522 49 ------------------------------------------------------------------------AGVVVISS 56 (221)
T ss_pred ------------------------------------------------------------------------CCeEEEeC
Confidence 12344432
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchh
Q 004692 257 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (736)
Q Consensus 257 ~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~ 336 (736)
..+|++|+|.|++. +++|+|+++|+|.++ +|+++.+++..+.++. ...+.....+.+. +..
T Consensus 57 -------~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~-~~~~l~~l~~~~~~~~----~~~~~~~~~~~~~---~~~ 117 (221)
T cd02522 57 -------PKGRARQMNAGAAA----ARGDWLLFLHADTRL-PPDWDAAIIETLRADG----AVAGAFRLRFDDP---GPR 117 (221)
T ss_pred -------CcCHHHHHHHHHHh----ccCCEEEEEcCCCCC-ChhHHHHHHHHhhcCC----cEEEEEEeeecCC---ccc
Confidence 24699999999998 889999999999986 5999999876665443 3323222223221 111
Q ss_pred hhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccchhh
Q 004692 337 DGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNV 416 (736)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 416 (736)
... .......+.......+.+.|.++||+++.
T Consensus 118 ~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-------------------------------------------- 149 (221)
T cd02522 118 LRL----LELGANLRSRLFGLPYGDQGLFIRRELFE-------------------------------------------- 149 (221)
T ss_pred hhh----hhhcccceecccCCCcCCceEEEEHHHHH--------------------------------------------
Confidence 110 01000011111222334567788888772
Q ss_pred HHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEE
Q 004692 417 LQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTY 465 (736)
Q Consensus 417 ~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y 465 (736)
+.|||+.+...||++.++++..+|++..+
T Consensus 150 --------------------~~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 150 --------------------ELGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred --------------------HhCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 24678888899999999999999999876
No 46
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.61 E-value=2.8e-14 Score=145.23 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=82.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.|+++++||. .++|+|+|||++|.|.+.+.+-. ++
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~----------~~-------------- 51 (219)
T cd06913 1 IILPV---HNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWR----------KK-------------- 51 (219)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHH----------Hh--------------
Confidence 68999 9997 79999999999999994 59999999999998764322210 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+ ..+++.++..+.
T Consensus 52 ----------------------~---------------------------------------------~~~~~~~~~~~~ 64 (219)
T cd06913 52 ----------------------L---------------------------------------------EDSGVIVLVGSH 64 (219)
T ss_pred ----------------------C---------------------------------------------cccCeEEEEecc
Confidence 0 001244444332
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D 311 (736)
+.+ .+.+.+.|+|.|++. ++||+++++|+|.+++ |+.+.+.+..+.+
T Consensus 65 ~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~ 111 (219)
T cd06913 65 NSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQ 111 (219)
T ss_pred cCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHh
Confidence 211 246899999999998 8999999999999865 9999887776653
No 47
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.61 E-value=2.5e-14 Score=145.04 Aligned_cols=114 Identities=18% Similarity=0.114 Sum_probs=86.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ ..+.+|+.++.++.|+ ..++|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPT---YNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEec---cchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 68999 9998 7899999999999993 3489999999999977542211
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+.+ ..|.+.++..++
T Consensus 48 ----------------------~~~-------------------------------------------~~~~i~~~~~~~ 62 (224)
T cd06442 48 ----------------------LAK-------------------------------------------EYPRVRLIVRPG 62 (224)
T ss_pred ----------------------HHH-------------------------------------------hCCceEEEecCC
Confidence 100 012244555544
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccC
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 324 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~p 324 (736)
+.||++|+|.|++. +.||+|+++|+|..+ +|+.+..++..+.+++ .+.|.++
T Consensus 63 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~~----~~~v~g~ 114 (224)
T cd06442 63 -----KRGLGSAYIEGFKA----ARGDVIVVMDADLSH-PPEYIPELLEAQLEGG----ADLVIGS 114 (224)
T ss_pred -----CCChHHHHHHHHHH----cCCCEEEEEECCCCC-CHHHHHHHHHHHhcCC----CCEEEEe
Confidence 56899999999999 889999999999986 5999999999876654 3445444
No 48
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.59 E-value=3.4e-14 Score=139.43 Aligned_cols=107 Identities=18% Similarity=0.183 Sum_probs=79.7
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+||.|+.+++|+. .+|+|+|||++|.|.+.+.+..
T Consensus 1 ivip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~-------------------------- 48 (182)
T cd06420 1 LIITT---YNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFK-------------------------- 48 (182)
T ss_pred CEEee---cCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHH--------------------------
Confidence 68999 9998 78999999999999886 6899999999996643221110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+ + ... .+.++.+++
T Consensus 49 ------------------------~---~--------------------------------------~~~-~~~~~~~~~ 62 (182)
T cd06420 49 ------------------------S---Q--------------------------------------FPI-PIKHVWQED 62 (182)
T ss_pred ------------------------h---h--------------------------------------cCC-ceEEEEcCC
Confidence 0 0 000 123444332
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~ 313 (736)
+..+|++++|.+++. ++||+|+++|+|.++ +|++|.+++..+ ++.
T Consensus 63 ----~~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~~~~~~-~~~ 107 (182)
T cd06420 63 ----EGFRKAKIRNKAIAA----AKGDYLIFIDGDCIP-HPDFIADHIELA-EPG 107 (182)
T ss_pred ----cchhHHHHHHHHHHH----hcCCEEEEEcCCccc-CHHHHHHHHHHh-CCC
Confidence 134799999999998 899999999999986 599999999877 443
No 49
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.59 E-value=2.6e-14 Score=155.74 Aligned_cols=109 Identities=18% Similarity=0.212 Sum_probs=87.9
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcc
Q 004692 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~ 173 (736)
.|.|+|+||+ ||++ +.+.+|+.|+++++|+. ++|+|+||||+|.|.+.+.+
T Consensus 5 ~p~vSVIIP~---yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~----------------------- 55 (328)
T PRK10073 5 TPKLSIIIPL---YNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKH----------------------- 55 (328)
T ss_pred CCeEEEEEec---cCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHH-----------------------
Confidence 4889999999 9998 79999999999999985 89999999999977543221
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEE
Q 004692 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
|.+ ..|++.+
T Consensus 56 ---------------------------~~~-------------------------------------------~~~~i~v 65 (328)
T PRK10073 56 ---------------------------YAE-------------------------------------------NYPHVRL 65 (328)
T ss_pred ---------------------------HHh-------------------------------------------hCCCEEE
Confidence 100 1134566
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004692 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~ 312 (736)
+.. + +.|.++|.|.|++. ++||||+++|+|..+. |+.+.+++..+.++
T Consensus 66 i~~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~ 113 (328)
T PRK10073 66 LHQ-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED 113 (328)
T ss_pred EEC-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC
Confidence 643 2 46899999999999 8999999999999975 99999999877543
No 50
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.59 E-value=2.2e-14 Score=137.38 Aligned_cols=157 Identities=19% Similarity=0.210 Sum_probs=120.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.|+.+++||. .+|+|+|||+++.|.+.+.+..
T Consensus 1 vii~~---~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVN---YNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEe---cCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 58999 9996 89999999999999954 6899999999986543221100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
+++.++..++
T Consensus 49 ----------------------------------------------------------------------~~~~~~~~~~ 58 (166)
T cd04186 49 ----------------------------------------------------------------------PEVRLIRNGE 58 (166)
T ss_pred ----------------------------------------------------------------------CCeEEEecCC
Confidence 0134454433
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhh
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG 338 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~ 338 (736)
+.++++|+|.+++. +++|+++++|+|.++ .|+++.+++..+.+ .++++++++.
T Consensus 59 -----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~-~~~~l~~~~~~~~~---~~~~~~~~~~-------------- 111 (166)
T cd04186 59 -----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVV-EPGALLELLDAAEQ---DPDVGIVGPK-------------- 111 (166)
T ss_pred -----CcChHHHhhHHHhh----CCCCEEEEECCCcEE-CccHHHHHHHHHHh---CCCceEEEcc--------------
Confidence 46899999999999 789999999999986 49999998876653 2237777533
Q ss_pred hhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccchhhHH
Q 004692 339 SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (736)
Q Consensus 339 ~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
++|++.++||+++.
T Consensus 112 --------------------~~~~~~~~~~~~~~---------------------------------------------- 125 (166)
T cd04186 112 --------------------VSGAFLLVRREVFE---------------------------------------------- 125 (166)
T ss_pred --------------------CceeeEeeeHHHHH----------------------------------------------
Confidence 67888899999882
Q ss_pred hhccccccceeeccccccccccccCCC--ccchHHHHHHHHHCCcEEEEeCC
Q 004692 419 QETEVLASCSYEHQTKWGEEVGFSYQS--VSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~wg~~~G~~~~s--itED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+... ..||.+.++++.++||++.++++
T Consensus 126 ------------------~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 126 ------------------EVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred ------------------HcCCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 124566543 46999999999999999999876
No 51
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.57 E-value=2.4e-14 Score=142.32 Aligned_cols=153 Identities=21% Similarity=0.236 Sum_probs=116.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhh-h
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR-S 342 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~-~ 342 (736)
-+.|.+||..+++. . +++|++++.|+|+.++ |++|++++..+.||+ +|.|.++....+. + .+....+ .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~--~-~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA--R-GFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC--c-CHHHHHHHH
Confidence 56899999999986 3 7899999999999975 999999999999987 9999876665543 2 2332222 2
Q ss_pred hhhhhHhhhh-hcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccchhhHHhhc
Q 004692 343 GYRLQWPGMD-GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQET 421 (736)
Q Consensus 343 f~~~~~~g~d-~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 421 (736)
++.....-.. .-+..+..|....+||++|.
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~------------------------------------------------- 114 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALE------------------------------------------------- 114 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHH-------------------------------------------------
Confidence 2211111111 12456778999999999992
Q ss_pred cccccceeeccccccccccccC--CCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccC----cCHHHHHHhhHHHhc
Q 004692 422 EVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST----TNLNDVLIQGTRWAS 493 (736)
Q Consensus 422 ~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP----~tl~~~l~Qr~RWa~ 493 (736)
+.|||.. +.+.||+.+|-+++++|||++..+. ++.....| .+++++++++.||++
T Consensus 115 ---------------~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 115 ---------------EIGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ---------------HcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 2356654 6899999999999999999999875 56666666 589999999999985
No 52
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.56 E-value=1.1e-12 Score=148.97 Aligned_cols=167 Identities=17% Similarity=0.223 Sum_probs=104.6
Q ss_pred CCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCCCchhh--hhhhhhh-hhhHhhhhhcCCcc
Q 004692 283 NSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYD--GSLRSGY-RLQWPGMDGLKGPF 358 (736)
Q Consensus 283 ~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n~~~~d~~~--~~~~~f~-~~~~~g~d~~~~~~ 358 (736)
..|||+.+|||+.+ +|+++.+++.-+. ||+ ++.|.+.-+..|... .+.. +..+++. +..+++..+.-|.+
T Consensus 201 ~~~~il~~DaDt~~-~p~~~~~lv~~m~~d~~----i~gvCG~t~i~n~~~-s~~t~~Q~fEY~ish~l~Ka~Es~fG~V 274 (527)
T PF03142_consen 201 FYEYILMVDADTKF-DPDSVNRLVDAMERDPK----IGGVCGETRIDNKGQ-SWWTMYQVFEYAISHHLQKAFESVFGSV 274 (527)
T ss_pred ceEEEEEecCCceE-cHHHHHHHHHHHcCCCC----eEEEeceeEEcCCCC-CHhhheeccchhHHHHHHHHHHHHhCce
Confidence 45999999999996 5999999998774 555 777777655665422 2221 2223222 33444555443444
Q ss_pred cc--ccccceehhhccCCcc-ccc--cchHhhHhhhcCchhHHhhhhhhccccccCCccchhhHHhhccccccceeeccc
Q 004692 359 LT--GTGHYIRRESLYGNFK-HKG--IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQT 433 (736)
Q Consensus 359 ~~--Gtg~~~RR~aL~~~~~-~~~--~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t 433 (736)
.| |.-++||-+|+..... ... .+ .++-++|.. .. +
T Consensus 275 tCLPGcfsmyR~~a~~~~~~~~~p~l~~-~~i~~~Y~~--------------~~-------------------------~ 314 (527)
T PF03142_consen 275 TCLPGCFSMYRISALMDGDGYWVPLLIS-PDIIEKYSE--------------NP-------------------------V 314 (527)
T ss_pred eecCCcceeeeeehhccccccccccccc-hHHHHHHhh--------------cc-------------------------c
Confidence 33 6666899999964100 000 00 011111100 00 0
Q ss_pred ccccccc-ccCCCccchHHHHHHHHHC--CcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhcccchhhh
Q 004692 434 KWGEEVG-FSYQSVSEDFFTGFILHCK--GWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSI 500 (736)
Q Consensus 434 ~wg~~~G-~~~~sitED~~t~~rl~~~--Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qi~~ 500 (736)
+... ..--.+.||-.++-.|.++ |||..|++. +.+.+.+|+|++.+++||+||..|++-.++
T Consensus 315 ---dtlh~~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 315 ---DTLHQKNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred ---hHHHHHhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 0000 0112578998888777776 899999986 789999999999999999999999986654
No 53
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.54 E-value=1.8e-13 Score=136.98 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=85.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||| |||+ +.+.+|+.|+++++||. .+|+|+|||++|.|.+.+.+. +
T Consensus 1 viI~~---~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~--------------~------------ 48 (202)
T cd04185 1 AVVVT---YNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSL--------------G------------ 48 (202)
T ss_pred CEEEe---eCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHh--------------c------------
Confidence 68999 9998 78999999999999995 579999999999765322111 0
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
...| +.++.-++
T Consensus 49 -------------------------------------------------------------------~~~~-i~~~~~~~ 60 (202)
T cd04185 49 -------------------------------------------------------------------DLDN-IVYLRLPE 60 (202)
T ss_pred -------------------------------------------------------------------CCCc-eEEEECcc
Confidence 0011 45555444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEc
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQ 322 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ 322 (736)
..+++.++|.+++.+- .+++|+++++|+|.+++ |+++++++..+.+++ ++.+.
T Consensus 61 -----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~----~~~~~ 113 (202)
T cd04185 61 -----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKDN----PQFLA 113 (202)
T ss_pred -----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCC----ceEec
Confidence 3578889999888632 25799999999999865 999999999887665 67663
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.53 E-value=6.1e-14 Score=133.57 Aligned_cols=160 Identities=28% Similarity=0.324 Sum_probs=104.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.+++++.|+. .+|+|+|||+++.|.+.+.+...
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~~------------------------- 49 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELAA------------------------- 49 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHhc-------------------------
Confidence 67999 9998 89999999999999964 78999999999976542221100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
...+.+.++..++
T Consensus 50 -------------------------------------------------------------------~~~~~~~~~~~~~ 62 (180)
T cd06423 50 -------------------------------------------------------------------LYIRRVLVVRDKE 62 (180)
T ss_pred -------------------------------------------------------------------cccceEEEEEecc
Confidence 0001234554443
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCCCchhh
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq~f~n~~~~d~~~ 337 (736)
+.+|+.|+|.+++. +++|+|+++|+|..+. |+++.+++..+ .+++ ++.|.......+... ..+.
T Consensus 63 -----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~-~~~~ 127 (180)
T cd06423 63 -----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADPK----VGAVQGRVRVRNGSE-NLLT 127 (180)
T ss_pred -----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCCC----eeeEeeeEEEecCcC-ccee
Confidence 46899999999998 7999999999999875 99999985444 4444 777765544433210 1111
Q ss_pred hhhhh-h---hhhhHhhhhhcC-Cccccccccceehhhc
Q 004692 338 GSLRS-G---YRLQWPGMDGLK-GPFLTGTGHYIRRESL 371 (736)
Q Consensus 338 ~~~~~-f---~~~~~~g~d~~~-~~~~~Gtg~~~RR~aL 371 (736)
..... + ......+....+ ...+.|++.++||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 166 (180)
T cd06423 128 RLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREAL 166 (180)
T ss_pred ccchheecceeeeeeehhheecceeecCchHHHHHHHHH
Confidence 11111 1 111111111112 2456788999999998
No 55
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.51 E-value=4.2e-13 Score=135.81 Aligned_cols=108 Identities=20% Similarity=0.141 Sum_probs=81.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCC--CCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dY--P~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf 176 (736)
|+||+ |||+ ..+.+++.++.++.+ +....+|+|+||||+|.|.+.+.+..
T Consensus 1 iiip~---yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~------------------------ 52 (211)
T cd04188 1 VVIPA---YNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLA------------------------ 52 (211)
T ss_pred CEEcc---cChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHH------------------------
Confidence 68999 9998 789999999998866 44458999999999997764322110
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe-EEEEe
Q 004692 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL-LVYVS 255 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~-l~yv~ 255 (736)
+ ..|. ++++.
T Consensus 53 --------------------------~-------------------------------------------~~~~~i~~i~ 63 (211)
T cd04188 53 --------------------------R-------------------------------------------KNPALIRVLT 63 (211)
T ss_pred --------------------------H-------------------------------------------hCCCcEEEEE
Confidence 0 0011 34555
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004692 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (736)
Q Consensus 256 R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~ 313 (736)
.++ ..||++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.++.
T Consensus 64 ~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~ 111 (211)
T cd04188 64 LPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTSG 111 (211)
T ss_pred ccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC
Confidence 444 35799999999999 8999999999999864 999999998865443
No 56
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.51 E-value=1.2e-13 Score=141.37 Aligned_cols=140 Identities=19% Similarity=0.183 Sum_probs=86.4
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC---CCEEEEeCCCCCCCchHHHHHHH---HhhcCCCCCCceEEEccC
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISN---SPYILGLDCDMYCNDPTSARQAM---CFHLDPKTSSSLAFVQFP 324 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~---g~~Il~~DAD~~~~~p~~L~~~v---~~f~D~~~~~~vg~VQ~p 324 (736)
+.++..++ +.|+++|+|.|++. +. +|+|+++|+|..++ |++|.+++ ..+. .+++++.+ +|
T Consensus 49 i~~i~~~~-----n~G~~~a~N~g~~~----a~~~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~---~~~~~~~~-~~ 114 (237)
T cd02526 49 IELIHLGE-----NLGIAKALNIGIKA----ALENGADYVLLFDQDSVPP-PDMVEKLLAYKILSD---KNSNIGAV-GP 114 (237)
T ss_pred EEEEECCC-----ceehHHhhhHHHHH----HHhCCCCEEEEECCCCCcC-HhHHHHHHHHHHhhc---cCCCeEEE-ee
Confidence 56666554 35799999999998 54 49999999999964 99999985 3222 12336655 45
Q ss_pred ceeccCCCCchhhhhhhh-hhhhhHhhhhhc-CCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhh
Q 004692 325 QKFHNFNEHDIYDGSLRS-GYRLQWPGMDGL-KGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQS 402 (736)
Q Consensus 325 q~f~n~~~~d~~~~~~~~-f~~~~~~g~d~~-~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~ 402 (736)
+................. .+.......... ......|+|+++||+++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~------------------------------ 164 (237)
T cd02526 115 RIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALE------------------------------ 164 (237)
T ss_pred eEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHH------------------------------
Confidence 544322111100000000 000000011111 223456888999999982
Q ss_pred ccccccCCccchhhHHhhccccccceeeccccccccccccCCCc--cchHHHHHHHHHCCcEEEEeCC
Q 004692 403 YEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV--SEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~si--tED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.+||+.+.. .||++.++|+..+||+..|+++
T Consensus 165 ----------------------------------~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 165 ----------------------------------KVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred ----------------------------------HhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 2356775543 5899999999999999999986
No 57
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.50 E-value=5.5e-13 Score=142.13 Aligned_cols=109 Identities=16% Similarity=0.254 Sum_probs=85.7
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCc
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+||.|+++++||. ++|+|+||||++ .+.+.+..
T Consensus 3 ~~p~VSVIip~---yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPT---WNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEe---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 35899999999 9998 67889999999999996 899999999984 21111100
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEE
Q 004692 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
++ ...|++.
T Consensus 55 -----------------------------~~------------------------------------------~~~~ri~ 63 (279)
T PRK10018 55 -----------------------------TA------------------------------------------LNDPRIT 63 (279)
T ss_pred -----------------------------HH------------------------------------------cCCCCEE
Confidence 00 0113577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004692 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~ 310 (736)
|+..++ +.|++.|+|.|++. ++||||+++|+|...+ |+.|.+.+.++.
T Consensus 64 ~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 64 YIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 776554 46899999999998 8999999999999975 999999888764
No 58
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.50 E-value=9.2e-13 Score=138.07 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=39.9
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCC-CCCCceEEEEEcCCCCccchh
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLH 146 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~d-YP~~kl~v~v~DDg~~~~T~~ 146 (736)
|.|+|+||| |||+ +.+.+|+.|+.++. .+...++|+|+||||+|.|.+
T Consensus 1 ~~vSVIi~~---yN~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVA---FRNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEe---CCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 679999999 9997 78999999998642 233358999999999998764
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.48 E-value=8.5e-14 Score=132.51 Aligned_cols=163 Identities=19% Similarity=0.098 Sum_probs=107.4
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccccc
Q 004692 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+ +.+.+|+.|++.+.++. .+|+|+|||++|.|.+.+.+..
T Consensus 1 Svvip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~------------------------- 49 (169)
T PF00535_consen 1 SVVIPT---YNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYA------------------------- 49 (169)
T ss_dssp EEEEEE---SS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHH-------------------------
T ss_pred CEEEEe---eCCH-HHHHHHHHHHhhccCCC--EEEEEecccccccccccccccc-------------------------
Confidence 699999 9996 89999999999995554 7899999999987654322211
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEecc
Q 004692 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
+ ..+++.|+.++
T Consensus 50 -----------------------------------~---------------------------------~~~~i~~i~~~ 61 (169)
T PF00535_consen 50 -----------------------------------E---------------------------------SDPNIRYIRNP 61 (169)
T ss_dssp -----------------------------------C---------------------------------CSTTEEEEEHC
T ss_pred -----------------------------------c---------------------------------ccccccccccc
Confidence 0 11347888887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhh
Q 004692 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~ 337 (736)
++ .++++|+|.|++. ++++||+++|+|.+++ |++|.+++..+.+.. .++..........+........
T Consensus 62 ~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 129 (169)
T PF00535_consen 62 EN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRL 129 (169)
T ss_dssp CC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCC
T ss_pred cc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecCCcccccccc
Confidence 63 4899999999999 8999999999999975 899999999998633 1232222222222111100000
Q ss_pred h--hhhhhhhhhHhhhhhcCCccccccccceehhhc
Q 004692 338 G--SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 371 (736)
Q Consensus 338 ~--~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 371 (736)
. .....+..............++|+++++||+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 165 (169)
T PF00535_consen 130 RFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVF 165 (169)
T ss_dssp TSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHH
T ss_pred chhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHH
Confidence 0 011223333444455567788999999999998
No 60
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.42 E-value=2.4e-11 Score=132.86 Aligned_cols=128 Identities=20% Similarity=0.151 Sum_probs=89.9
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcC------CCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhc
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~------dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~ 165 (736)
+..|.|+|+||+ |||+ ..+.+++.++.++ ++|...++|+|+||||+|.|.+.+.+.++ ++
T Consensus 67 ~~~~~isVVIP~---yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~----------~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPA---YNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWR----------QN 132 (333)
T ss_pred CCCeEEEEEEee---CCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHH----------hc
Confidence 456899999999 9998 6788999888763 24555689999999999988753322110 00
Q ss_pred CCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccc
Q 004692 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADL 245 (736)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~ 245 (736)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (333)
T PTZ00260 133 I------------------------------------------------------------------------------- 133 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEcc
Q 004692 246 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (736)
Q Consensus 246 ~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (736)
..-+.+.++..++ +.||++|+|.|++. ++||+|+++|||... +|+.+.+++..+.+-+ .+.+++|.+
T Consensus 134 ~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~~~~l~~l~~~l~~~~-~~~~dvV~G 200 (333)
T PTZ00260 134 NPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGAT-DIDDFDKLEDIMLKIE-QNGLGIVFG 200 (333)
T ss_pred CCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCC-CHHHHHHHHHHHHHhh-ccCCceEEe
Confidence 0001245555443 46899999999998 889999999999985 5999988887775310 112556654
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.42 E-value=1.4e-12 Score=128.13 Aligned_cols=120 Identities=17% Similarity=0.151 Sum_probs=90.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.++.++.|+....+|+|+|||++|.|.+.+.+.
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~--------------------------- 49 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIAREL--------------------------- 49 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHH---------------------------
Confidence 57999 9998 7899999999999996557899999999999765432221
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
.+ ..|.++++..++
T Consensus 50 -----------------------~~-------------------------------------------~~~~~~~~~~~~ 63 (185)
T cd04179 50 -----------------------AA-------------------------------------------RVPRVRVIRLSR 63 (185)
T ss_pred -----------------------HH-------------------------------------------hCCCeEEEEccC
Confidence 00 012245555544
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceecc
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHN 329 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n 329 (736)
..+|++|+|.+++. ++||+++++|+|..+ .|+.|.+++..+.+++ .++|..+....+
T Consensus 64 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~~----~~~v~g~~~~~~ 120 (185)
T cd04179 64 -----NFGKGAAVRAGFKA----ARGDIVVTMDADLQH-PPEDIPKLLEKLLEGG----ADVVIGSRFVRG 120 (185)
T ss_pred -----CCCccHHHHHHHHH----hcCCEEEEEeCCCCC-CHHHHHHHHHHHhccC----CcEEEEEeecCC
Confidence 35799999999999 889999999999986 5999999999865443 566766655443
No 62
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.31 E-value=2.6e-11 Score=128.62 Aligned_cols=145 Identities=15% Similarity=-0.023 Sum_probs=90.5
Q ss_pred CeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceec
Q 004692 249 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFH 328 (736)
Q Consensus 249 p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~ 328 (736)
|++.|+..++ +.|.|+|+|.|++.+- -.++|+|+++|.|.+++ |+.+.+++..+.++ +.+++.|+ |..+.
T Consensus 45 ~~i~~i~~~~-----N~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 45 QKIALIHLGD-----NQGIAGAQNQGLDASF-RRGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CCeEEEECCC-----CcchHHHHHHHHHHHH-HCCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 3467776544 4589999999998721 02689999999999865 99999999887642 12478875 54433
Q ss_pred cCCCCchhhh--hhhhhhhhh-Hhhhhh-cCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhcc
Q 004692 329 NFNEHDIYDG--SLRSGYRLQ-WPGMDG-LKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (736)
Q Consensus 329 n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~ 404 (736)
.. ....+.. ......... ...... .......++|+++||+++.
T Consensus 115 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~-------------------------------- 161 (281)
T TIGR01556 115 RG-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQ-------------------------------- 161 (281)
T ss_pred CC-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHH--------------------------------
Confidence 21 1111110 000000000 000011 1223456788999999982
Q ss_pred ccccCCccchhhHHhhccccccceeeccccccccccccCCC--ccchHHHHHHHHHCCcEEEEeCC
Q 004692 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQS--VSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~s--itED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.|||+.+- =.||.+..+|+.++||++.++++
T Consensus 162 --------------------------------~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 162 --------------------------------RLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred --------------------------------HhCCccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 124455442 25899999999999999999986
No 63
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.28 E-value=7.2e-11 Score=127.59 Aligned_cols=124 Identities=20% Similarity=0.122 Sum_probs=89.1
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCC
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~ 171 (736)
..-|+|+|+||+ |||+ +.+.+++.++.++.++....+|+|+||||+|.|.+.+.+. +.+
T Consensus 28 ~~~~~vSVVIPa---yNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~--------------~~~--- 86 (306)
T PRK13915 28 KAGRTVSVVLPA---LNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAA--------------GAR--- 86 (306)
T ss_pred cCCCCEEEEEec---CCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHh--------------cch---
Confidence 356899999999 9998 7899999999987663224689999999999876432221 100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeE
Q 004692 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
.+. ..
T Consensus 87 ----------------------------v~~-----------------------------------------------~~ 91 (306)
T PRK13915 87 ----------------------------VVS-----------------------------------------------RE 91 (306)
T ss_pred ----------------------------hhc-----------------------------------------------ch
Confidence 000 00
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEcc
Q 004692 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 323 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 323 (736)
..+.+ .+ .+.||++|+|.+++. ++||+|+++|||....+|+++.+++..+. ||+ +++|.+
T Consensus 92 ~~~~~--~~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~----~~~V~g 152 (306)
T PRK13915 92 EILPE--LP--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFDPMFVPGLLGPLLTDPG----VHLVKA 152 (306)
T ss_pred hhhhc--cc--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCCHHHHHHHHHHHHhCCC----ceEEEE
Confidence 00000 01 146899999999998 89999999999996345999999998886 665 677764
No 64
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.27 E-value=5.5e-11 Score=117.12 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=41.6
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
++.++..++ +.||++|+|.+++. +.+|+|+++|+|... +|+.|.+++..+
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~-~~~~l~~l~~~~ 105 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQD-PPELIPEMLAKW 105 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCC-CHHHHHHHHHHH
Confidence 356665544 45899999999998 889999999999986 599999999874
No 65
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.19 E-value=2.4e-09 Score=116.69 Aligned_cols=110 Identities=16% Similarity=0.140 Sum_probs=80.7
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHc-C-CCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCC
Q 004692 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMA-L-DYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 94 ~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~-~-dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~ 171 (736)
.++++|+||+ |||+ +.+.+++.++.+ + ..+ ...+|+|+||||+|.|.+.+.+.++
T Consensus 5 ~~~vSVVIP~---yNE~-~~i~~~l~~l~~~~~~~~-~~~EIIvVDDgS~D~T~~il~~~~~------------------ 61 (325)
T PRK10714 5 IKKVSVVIPV---YNEQ-ESLPELIRRTTAACESLG-KEYEILLIDDGSSDNSAEMLVEAAQ------------------ 61 (325)
T ss_pred CCeEEEEEcc---cCch-hhHHHHHHHHHHHHHhCC-CCEEEEEEeCCCCCcHHHHHHHHHh------------------
Confidence 4679999999 9998 678888776643 1 122 2489999999999988754433210
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeE
Q 004692 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
.+ -+++
T Consensus 62 ----------------------------~~----------------------------------------------~~~v 67 (325)
T PRK10714 62 ----------------------------AP----------------------------------------------DSHI 67 (325)
T ss_pred ----------------------------hc----------------------------------------------CCcE
Confidence 00 0123
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004692 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~ 310 (736)
+.+..++ +.||++|+|+|+++ ++||+++++|||...+ |+.+.+++..+.
T Consensus 68 ~~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 68 VAILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred EEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 4443333 46899999999999 8999999999999965 999999998775
No 66
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.17 E-value=2.8e-10 Score=133.84 Aligned_cols=167 Identities=19% Similarity=0.235 Sum_probs=110.8
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCCCchhh--hhhh
Q 004692 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYD--GSLR 341 (736)
Q Consensus 265 ~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n~~~~d~~~--~~~~ 341 (736)
+.|--.+|.+.... +.+=++|+.+|+|+.+ +|+++.+++.-|. ||+ ||-+.+ +..|. .+.++. +..+
T Consensus 424 ~~~r~~~y~~~~~L--~~~v~~il~vD~dT~~-~P~ai~~lv~~f~~dp~----VggaCG--~I~~~-~~~w~v~~Q~FE 493 (862)
T KOG2571|consen 424 NQHRWVMYTAFKAL--MPSVDYILVVDADTRL-DPDALYHLVKVFDEDPQ----VGGACG--RILNK-GGSWVVAYQNFE 493 (862)
T ss_pred HHHHHHHHHHHHHh--cCcceEEEEecCCCcc-CcHHHHHHHHHhccCcc----cceecc--ccccC-CCceEEeHHHHH
Confidence 44555677776663 3566799999999996 5999999999996 776 666655 23332 111111 2222
Q ss_pred hhh-hhhHhhhhhcCCcccccccc--ceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccchhhHH
Q 004692 342 SGY-RLQWPGMDGLKGPFLTGTGH--YIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (736)
Q Consensus 342 ~f~-~~~~~g~d~~~~~~~~Gtg~--~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
... ...++.-+..-|-+.|=.|| +||-+||.+.. .+..+|..
T Consensus 494 Y~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~---------~~~~y~~~-------------------------- 538 (862)
T KOG2571|consen 494 YAISHNLQKATESVFGCVSCLPGCFSLYRASALMDQF---------VEYFYGEK-------------------------- 538 (862)
T ss_pred HHHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcch---------HHhhhchh--------------------------
Confidence 211 23445555555555554554 79999997521 11111110
Q ss_pred hhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhHHHhcc
Q 004692 419 QETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASG 494 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 494 (736)
+=|..-|..+ +..||-.+..++..+||+.-|+.. +.+.+.+|+++.+++.||+||..|
T Consensus 539 ---------------~~~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 539 ---------------FSGPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ---------------hcCccccccc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 0001123333 489999999999999999999986 789999999999999999999999
No 67
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.17 E-value=6.2e-10 Score=103.29 Aligned_cols=113 Identities=27% Similarity=0.266 Sum_probs=81.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccccccc
Q 004692 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ +||+ ..+..|+.+++.++|+. .+++|+||++++.+.+.+.+..+
T Consensus 1 iii~~---~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPA---YNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 57999 8887 78999999999999954 67999999998855432222110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccC
Q 004692 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k 258 (736)
. .+...++..++
T Consensus 50 ------------------------~--------------------------------------------~~~~~~~~~~~ 61 (156)
T cd00761 50 ------------------------K--------------------------------------------DPRVIRVINEE 61 (156)
T ss_pred ------------------------c--------------------------------------------CCCeEEEEecC
Confidence 0 00123443333
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHh-hcCCCCCCceEEEccC
Q 004692 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKTSSSLAFVQFP 324 (736)
Q Consensus 259 ~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~-f~D~~~~~~vg~VQ~p 324 (736)
+.+|++++|.+++. .++|+++++|+|.++ +|+.+...+.. ..+++ .+.|+++
T Consensus 62 -----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~-~~~~~~~~~~~~~~~~~----~~~v~~~ 114 (156)
T cd00761 62 -----NQGLAAARNAGLKA----ARGEYILFLDADDLL-LPDWLERLVAELLADPE----ADAVGGP 114 (156)
T ss_pred -----CCChHHHHHHHHHH----hcCCEEEEECCCCcc-CccHHHHHHHHHhcCCC----ceEEecc
Confidence 56899999999998 789999999999986 48999887443 44443 6777654
No 68
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.13 E-value=1.4e-09 Score=116.12 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=83.6
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhh---
Q 004692 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR--- 341 (736)
Q Consensus 265 ~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~--- 341 (736)
-++|.|.|.|++. +++|+|+++|+|++++ |+++.+++.+..+-.. ..-+++-.|..+.+.+....+.....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~-~~~~~~~~p~~yl~~~~~~~~~~~~~~~~ 147 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDK-NPNAFLVYPCLYLSEEGSEKFYSQFKNLW 147 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhc-CCCceEEEeeeeccchhhHHHhhcchhcc
Confidence 4899999999999 8999999999999865 9999999983211001 11245555666554322222211110
Q ss_pred --hhhhhhHhh-hhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCccchhhHH
Q 004692 342 --SGYRLQWPG-MDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (736)
Q Consensus 342 --~f~~~~~~g-~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
.+.+....+ .+.++....+|++.+++|+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~---------------------------------------------- 181 (281)
T PF10111_consen 148 DHEFLESFISGKNSLWEFIAFASSCFLINREDFL---------------------------------------------- 181 (281)
T ss_pred hHHHHHHHhhccccccccccccceEEEEEHHHHH----------------------------------------------
Confidence 011111111 1222223345666788888772
Q ss_pred hhccccccceeeccccccccccccCCC---ccchHHHHHHHHHCCcEEEEeCC
Q 004692 419 QETEVLASCSYEHQTKWGEEVGFSYQS---VSEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~wg~~~G~~~~s---itED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+.|||+++- --||++.+.||...|.+..++++
T Consensus 182 ------------------~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 182 ------------------EIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred ------------------HhCCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 246676542 36999999999999999887765
No 69
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.11 E-value=3.1e-09 Score=114.69 Aligned_cols=209 Identities=17% Similarity=0.186 Sum_probs=134.5
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcc
Q 004692 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~ 173 (736)
-|.+.++|+| ||-. +.+.+++.++.+++||.+ .++++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~---yn~~-~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVT---YNRG-EDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEe---cCCH-HHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhh----------------------
Confidence 4789999999 8887 789999999999999985 35589999999765422110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEE
Q 004692 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
..|++.+
T Consensus 54 -------------------------------------------------------------------------~~~~v~~ 60 (305)
T COG1216 54 -------------------------------------------------------------------------FFPNVRL 60 (305)
T ss_pred -------------------------------------------------------------------------cCCcEEE
Confidence 0245677
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCC
Q 004692 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNE 332 (736)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~-~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~ 332 (736)
+.-.+ +-|=||+.|.+++... .+++ ++++++-|+++ +|++|.+++..+.+. +..+.|+.....++...
T Consensus 61 i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~-~~~~l~~ll~~~~~~---~~~~~~~~~i~~~~~~~ 129 (305)
T COG1216 61 IENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVV-EPDLLEELLKAAEED---PAAGVVGPLIRNYDESL 129 (305)
T ss_pred EEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeee-ChhHHHHHHHHHHhC---CCCeEeeeeEecCCCCc
Confidence 76544 4578999999998832 3444 89999999875 599999999888632 23677754443332110
Q ss_pred -Cchhhhhhhh---------hhhhhH--hhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhh
Q 004692 333 -HDIYDGSLRS---------GYRLQW--PGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 400 (736)
Q Consensus 333 -~d~~~~~~~~---------f~~~~~--~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~ 400 (736)
.+..+..... .++... ...+... +.++|.++++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~li~~~~~~---------------------------- 180 (305)
T COG1216 130 YIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVV-ASLSGACLLIRREAFE---------------------------- 180 (305)
T ss_pred chheeccccccccccceecccccccccccchhhhh-hhcceeeeEEcHHHHH----------------------------
Confidence 0001000000 000000 0000000 0357777889999882
Q ss_pred hhccccccCCccchhhHHhhccccccceeeccccccccccccCC--CccchHHHHHHHHHCCcEEEEeCCCCCeeEeccC
Q 004692 401 QSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ--SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST 478 (736)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~--sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP 478 (736)
+.|||+.+ .-.||++.+.|+..+||++.|++.. ...+-...
T Consensus 181 ------------------------------------~vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a-~i~H~~g~ 223 (305)
T COG1216 181 ------------------------------------KVGGFDERFFIYYEDVDLCLRARKAGYKIYYVPDA-IIYHKIGS 223 (305)
T ss_pred ------------------------------------HhCCCCcccceeehHHHHHHHHHHcCCeEEEeecc-EEEEeccC
Confidence 23556654 5589999999999999999999874 34443444
Q ss_pred cC
Q 004692 479 TN 480 (736)
Q Consensus 479 ~t 480 (736)
++
T Consensus 224 s~ 225 (305)
T COG1216 224 SK 225 (305)
T ss_pred CC
Confidence 43
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.86 E-value=2.1e-08 Score=95.81 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=43.5
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchh
Q 004692 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (736)
Q Consensus 94 ~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~ 146 (736)
.|.++|+||| |||+ ..+.++|.|++++.|+. .+|+|+|||++|.|.+
T Consensus 2 ~~~~siiip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 4889999999 9999 89999999999999998 6799999999998764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.82 E-value=3.1e-08 Score=102.13 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=38.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~ 312 (736)
..+++.+.|.|+.. +.+|+|+++|+|..++ |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 45799999999998 8899999999999975 99999988887653
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.60 E-value=1.3e-07 Score=101.41 Aligned_cols=225 Identities=18% Similarity=0.226 Sum_probs=148.5
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCC
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~ 171 (736)
..+|.|+|+-|--+ -+ +.+.+-+++-...+|| |+|.+.+=+.+.| +|.+..+
T Consensus 82 ~~LPgVSiikPl~G---~d-~nl~~Nlesffts~Y~--~~ElLfcv~s~eD-------pAi~vv~--------------- 133 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKG---VD-PNLYHNLESFFTSQYH--KYELLFCVESSED-------PAIEVVE--------------- 133 (431)
T ss_pred CCCCCceEEeeccc---CC-chhHHhHHHHHhhccC--ceEEEEEEccCCC-------cHHHHHH---------------
Confidence 37899999999955 33 3577889999999999 6898877766666 2221100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeE
Q 004692 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
++-++| |++ + .-
T Consensus 134 ------------------------~Ll~ky----------------------p~V-d---------------------Ak 145 (431)
T KOG2547|consen 134 ------------------------RLLKKY----------------------PNV-D---------------------AK 145 (431)
T ss_pred ------------------------HHHhhC----------------------CCc-c---------------------eE
Confidence 111122 221 0 11
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEE-ccCceeccC
Q 004692 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV-QFPQKFHNF 330 (736)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V-Q~pq~f~n~ 330 (736)
.++..++ -| -+-|-.|+=-|.+. ++.|+|++.|.|-.+- ||.+.++..-++.++ ++|+| |+|-.+.-.
T Consensus 146 lf~gG~~-vg--~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~dr~ 214 (431)
T KOG2547|consen 146 LFFGGEK-VG--LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKDRQ 214 (431)
T ss_pred EEEcccc-cc--cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeeccc
Confidence 3444443 22 44688888888888 8999999999999974 999999988887654 48988 566555421
Q ss_pred CCCchhhhhhhhhhhhhHhhhhhc-----CCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccc
Q 004692 331 NEHDIYDGSLRSGYRLQWPGMDGL-----KGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH 405 (736)
Q Consensus 331 ~~~d~~~~~~~~f~~~~~~g~d~~-----~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~ 405 (736)
++-..-++ ++|...+ ++-.+ +-...+|-.|+.|+++| |
T Consensus 215 --Gf~atle~-~~fgTsh-~r~yl~~n~~~~~c~tgms~~mrK~~l---------d------------------------ 257 (431)
T KOG2547|consen 215 --GFDATLEQ-VYFGTSH-PRIYLSGNVLGFNCSTGMSSMMRKEAL---------D------------------------ 257 (431)
T ss_pred --cchhhhhh-eeeccCC-ceEEEccccccccccccHHHHHHHHHH---------H------------------------
Confidence 11111111 3333221 11111 22234566678999998 3
Q ss_pred cccCCccchhhHHhhccccccceeecccccccccccc--CCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHH
Q 004692 406 KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFS--YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLND 483 (736)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~--~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~ 483 (736)
+++|+. .+.+.||.-.+-.+..+||++.+... ++-...+-.+...
T Consensus 258 -------------------------------~~ggi~~f~~yLaedyFaaksllSRG~ksaist~--palQnSas~~mss 304 (431)
T KOG2547|consen 258 -------------------------------ECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSS 304 (431)
T ss_pred -------------------------------HhccHHHHHHHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHH
Confidence 123322 24789999999999999999999875 5556667788889
Q ss_pred HHHhhHHHhc
Q 004692 484 VLIQGTRWAS 493 (736)
Q Consensus 484 ~l~Qr~RWa~ 493 (736)
+..|-.||..
T Consensus 305 f~~Ri~rwvk 314 (431)
T KOG2547|consen 305 FLDRIIRWVK 314 (431)
T ss_pred HHHHHHHhhh
Confidence 9999999984
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.20 E-value=4.5e-05 Score=75.29 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=45.4
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEcc
Q 004692 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (736)
++....|.+ .-|=.-|.-+++.+ ++|+|+++.|||-- .+|.++-+.+..-.+- +..+|-+
T Consensus 64 ~i~l~pR~~-----klGLgtAy~hgl~~----a~g~fiviMDaDls-HhPk~ipe~i~lq~~~----~~div~G 123 (238)
T KOG2978|consen 64 NILLKPRTK-----KLGLGTAYIHGLKH----ATGDFIVIMDADLS-HHPKFIPEFIRLQKEG----NYDIVLG 123 (238)
T ss_pred cEEEEeccC-----cccchHHHHhhhhh----ccCCeEEEEeCccC-CCchhHHHHHHHhhcc----Ccceeee
Confidence 466777765 34667789999999 99999999999986 6699998877755443 2566643
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=97.93 E-value=5.9e-05 Score=78.86 Aligned_cols=110 Identities=22% Similarity=0.190 Sum_probs=75.1
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHH---cCCCCC---CceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCcc
Q 004692 96 AIDVFICTADPEKEPAIGVMNTVLSAM---ALDYPV---DKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (736)
Q Consensus 96 ~VdV~Ipt~~p~nE~~~~v~~Tv~s~~---~~dYP~---~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~ 169 (736)
..+|+||+ |||+ .-+..-+..++ .-.|-. =..+|.|+|||+.|.|.+.. +.||+|+|.+
T Consensus 68 ~lsVIVpa---ynE~-~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~d- 132 (323)
T KOG2977|consen 68 YLSVIVPA---YNEE-GRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGDD- 132 (323)
T ss_pred eeEEEEec---CCcc-cchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCcc-
Confidence 68999999 9998 33333333322 334543 47899999999999876432 2477777632
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcC
Q 004692 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p 249 (736)
T Consensus 133 -------------------------------------------------------------------------------- 132 (323)
T KOG2977|consen 133 -------------------------------------------------------------------------------- 132 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC--CCchHHHHHHHHhh
Q 004692 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY--CNDPTSARQAMCFH 309 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~--~~~p~~L~~~v~~f 309 (736)
+++.+.-.+ +.+|.||..-++-+ +.|+++++-|||-- .++-+.|.+++.--
T Consensus 133 ~irV~~l~~-----nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~ 185 (323)
T KOG2977|consen 133 NIRVIKLKK-----NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDK 185 (323)
T ss_pred eEEEeehhc-----cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhh
Confidence 134444433 46899999999988 89999999999963 34455677766533
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.85 E-value=0.00014 Score=79.37 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=36.6
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004692 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (736)
Q Consensus 97 VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~ 143 (736)
+-|+|.| ||-| +.+.+|+.|++++.+-.+..+|+|++||+++.
T Consensus 2 ~PVlv~a---yNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~ 44 (334)
T cd02514 2 IPVLVIA---CNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE 44 (334)
T ss_pred cCEEEEe---cCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH
Confidence 4588999 8887 89999999999987445678899999999873
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.20 E-value=0.018 Score=62.85 Aligned_cols=49 Identities=24% Similarity=0.185 Sum_probs=40.9
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 004692 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (736)
Q Consensus 91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~ 142 (736)
++++|+++|+|.- +||--..+++||.|++.-.=|+---+|+++||=++.
T Consensus 151 pe~Lpt~SVviVF---HNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVF---HNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEE---ecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 6789999999999 999999999999999876644434468888987764
No 77
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=95.47 E-value=0.23 Score=59.77 Aligned_cols=75 Identities=23% Similarity=0.232 Sum_probs=53.1
Q ss_pred CCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccC-cCHHHHHHhhHHHhcccchhhhhhcCCcccCCCCCchhHHHHHH
Q 004692 444 QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST-TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYG 522 (736)
Q Consensus 444 ~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP-~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~ 522 (736)
-.++||+..||....+|-++.++.- ...|-.- -.+.+-+.=-..-+.|+-|..+||.--.+. .+|.+..-+.+.
T Consensus 408 lhLsEDIfaG~n~~lRGG~i~h~ey---~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrLg--~~ld~~R~LSfy 482 (817)
T PF02364_consen 408 LHLSEDIFAGMNATLRGGRIKHCEY---IQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRLG--TRLDFFRFLSFY 482 (817)
T ss_pred ccccHHHHHHHHHHhcCCceeehhh---hhcccccccCchhhhhhHhHhcCCccchhhhHHHHHhh--ccCCHHHHHHHH
Confidence 3789999999999999999999974 4455443 244444444567899999999988632232 567776666444
Q ss_pred H
Q 004692 523 E 523 (736)
Q Consensus 523 ~ 523 (736)
.
T Consensus 483 y 483 (817)
T PF02364_consen 483 Y 483 (817)
T ss_pred h
Confidence 3
No 78
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.36 E-value=0.037 Score=49.03 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=28.7
Q ss_pred CCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchh
Q 004692 107 EKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (736)
Q Consensus 107 ~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~ 146 (736)
+||+ ..+...|..-+++.+-+ +||.|||++|.|.+
T Consensus 1 rne~-~~L~~wl~~~~~lG~d~----i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGVDH----IYIYDDGSTDGTRE 35 (97)
T ss_pred CChH-HHHHHHHHHHHHcCCCE----EEEEECCCCccHHH
Confidence 4787 68999999998887643 99999999998754
No 79
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.86 E-value=0.074 Score=58.40 Aligned_cols=49 Identities=22% Similarity=0.179 Sum_probs=43.4
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~ 143 (736)
.++|.-+|+|+- +||....+.+||.|+++..=++=-.+|+++||++.|.
T Consensus 121 ~dlp~TsviITf---HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITF---HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEe---ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 468999999999 9999999999999999987554466899999999984
No 80
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.43 E-value=0.045 Score=63.73 Aligned_cols=48 Identities=29% Similarity=0.280 Sum_probs=41.6
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~ 142 (736)
+.+|+++|+|+- +||...++.+||.|+....=|.-.-+|+|+||+++.
T Consensus 139 ~~Lp~~Svii~f---~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~ 186 (578)
T KOG3736|consen 139 DKLPTTSVIIIF---HNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDR 186 (578)
T ss_pred cccCCCceEEEE---ecCCCcchhheEEeehccCChhHeEEEEEeecCcch
Confidence 569999999999 999999999999998887755546679999999975
No 81
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=93.03 E-value=0.28 Score=50.70 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=39.5
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEE
Q 004692 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFV 321 (736)
Q Consensus 265 ~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~V 321 (736)
..-|.+.|.|++. ++++|++.+.-|..+.+++++.+++..| .||+ +|.+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~----~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPN----IGMI 89 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TT----EEEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCC----ccEE
Confidence 4577899999999 9999999999999998899999999999 7776 7666
No 82
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=91.17 E-value=2.1 Score=48.65 Aligned_cols=48 Identities=25% Similarity=0.378 Sum_probs=29.7
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCC-CCceEEEEEcCCCCccc
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYP-VDKLHVYLSDDGGSPIT 144 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP-~~kl~v~v~DDg~~~~T 144 (736)
...|.+-|+|-+ +|=| .-+.+||.++++.. | +++..|+|+.||+.+.|
T Consensus 90 ~~~~~~pVlV~A---cNRp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~ 138 (434)
T PF03071_consen 90 NKEPVIPVLVFA---CNRP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEV 138 (434)
T ss_dssp -------EEEEE---SS-T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHH
T ss_pred cCCCcceEEEEe---cCCc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHH
Confidence 456778888888 7777 78999999999987 6 46889999999997743
No 83
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=89.06 E-value=3.2 Score=45.71 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=32.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHH
Confidence 6789988887764421 1467999999999997 58887766544
No 84
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=88.57 E-value=3.7 Score=45.01 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=31.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~y 183 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIY 183 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHH
Confidence 6789988877764421 1467999999999997 57887765544
No 85
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=87.26 E-value=16 Score=36.17 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=36.0
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHh
Q 004692 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 308 (736)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~ 308 (736)
-+.+.-.|+|.+. -+.=.--.|+.-++ -+-++++.+||.+. |.+++|-++..-
T Consensus 110 Q~ifclKe~N~kK-inSHrWfFnaf~~~----l~P~vcvllDvGT~-P~~~siy~Lwka 162 (163)
T PF01644_consen 110 QIIFCLKEKNAKK-INSHRWFFNAFCRQ----LQPNVCVLLDVGTK-PGKDSIYHLWKA 162 (163)
T ss_pred EEEEEeccccccc-cchhhHHHHHHHhh----cCCcEEEEEecCCC-cCchHHHHHHhh
Confidence 3566667765331 22234455666666 78999999999998 669998776543
No 86
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=86.13 E-value=7.3 Score=42.98 Aligned_cols=43 Identities=16% Similarity=0.184 Sum_probs=28.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
++||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 5689999888775421 1567999999999996 78887755433
No 87
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=83.59 E-value=12 Score=40.12 Aligned_cols=56 Identities=13% Similarity=0.092 Sum_probs=40.5
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCC--ccchhhHHHH
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGS--PITLHGMREA 151 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~--~~T~~~l~e~ 151 (736)
.+-|+|=|+.|-.| +| ..+.+=...+.+++||++++++-++-.-++ +.|.+.|.++
T Consensus 22 ~~~e~VLILtplrn--a~--~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AA--SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCC--ch--HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 45688999999844 23 479999999999999999999844443344 6666555544
No 88
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=82.10 E-value=62 Score=41.73 Aligned_cols=72 Identities=24% Similarity=0.330 Sum_probs=45.4
Q ss_pred CccchHHHHHHHHHCCcEEEEeCCCCCeeEeccC-cCHHHHHHhhHHHhcccchhhhhhcCCcccCCCCCchhHHHHH
Q 004692 445 SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST-TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCY 521 (736)
Q Consensus 445 sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP-~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y 521 (736)
.+.||+..||.-..+|-++.+|.- ...|-.- -.+.+-..=-..-+.|+=|..+||.-=.+ | .++.+..-|.+
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~EY---iQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrL-G-~~ldffRmLSf 1245 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHEY---IQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRL-G-TQLDFFRMLSF 1245 (1679)
T ss_pred ccchHhhhhhhHHhhCCCccccee---eecccccccCcchhhhhhhhhcCCCcchhhhHHHHHh-c-ccccHHHHHHH
Confidence 789999999999999999988863 2333221 12222222234668899998888762222 2 46666555533
No 89
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=81.07 E-value=11 Score=45.31 Aligned_cols=43 Identities=16% Similarity=0.144 Sum_probs=32.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~y 188 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHF 188 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHH
Confidence 6789988887765422 2567999999999997 57887766544
No 90
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=76.58 E-value=28 Score=37.04 Aligned_cols=80 Identities=21% Similarity=0.172 Sum_probs=40.7
Q ss_pred cCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCce-EEEccCce
Q 004692 248 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSL-AFVQFPQK 326 (736)
Q Consensus 248 ~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~v-g~VQ~pq~ 326 (736)
+|++.|+.-.. |. +-..-+-.-|+|...|-.-.++.+|+++|+|++...-++. +.+..-.--+...++ ++.--|..
T Consensus 61 ~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~-k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFA-KMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEeccccccHHHHH-HHHHHHHHHHHHhccCcceeeeee
Confidence 35677776422 21 1111144445666553333568999999999997633444 433221100111123 44445666
Q ss_pred eccC
Q 004692 327 FHNF 330 (736)
Q Consensus 327 f~n~ 330 (736)
+-|-
T Consensus 138 ~LNk 141 (346)
T COG4092 138 HLNK 141 (346)
T ss_pred ecch
Confidence 6664
No 91
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=70.73 E-value=24 Score=36.63 Aligned_cols=53 Identities=11% Similarity=-0.135 Sum_probs=35.2
Q ss_pred cchHHHHHHHHHCCcEEEEeCCCCC----ee------EeccCcCHHHHHHhhHHHhcccchhh
Q 004692 447 SEDFFTGFILHCKGWTSTYLDPSRP----QF------LGTSTTNLNDVLIQGTRWASGLIDVS 499 (736)
Q Consensus 447 tED~~t~~rl~~~Gwrs~y~~~~~~----~~------~g~aP~tl~~~l~Qr~RWa~G~~qi~ 499 (736)
.||-+.+.||..+|.+.......-. .- ....|.-+.....++.||+...+..+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 6999999999999988766543210 00 12234555666777888887777544
No 92
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=54.25 E-value=1.1e+02 Score=35.83 Aligned_cols=47 Identities=17% Similarity=0.226 Sum_probs=36.0
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~ 305 (736)
+.++..... ...++.+|+.|++.. .+.+++.+.|.|+..+ +++|.+.
T Consensus 316 i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 316 IKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred eEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHH
Confidence 566665411 457999999999863 4567999999999986 9999764
No 93
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=51.98 E-value=19 Score=39.50 Aligned_cols=46 Identities=26% Similarity=0.302 Sum_probs=31.1
Q ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEE
Q 004692 271 LNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 321 (736)
Q Consensus 271 LN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 321 (736)
-|.|+.. +..++|+++|+|++ |.+++-+....+........+.++|
T Consensus 119 RNvAr~~----a~T~~v~~~DvD~~-ps~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 119 RNVARSG----ARTDYVFLLDVDFL-PSPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHHh----cCcceEEEecceee-eCcchHHHHHHHhhhhccCCceEEE
Confidence 3667777 88999999999997 5577665555544322234456776
No 94
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=46.84 E-value=47 Score=37.36 Aligned_cols=40 Identities=13% Similarity=-0.001 Sum_probs=30.3
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004692 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 267 KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~ 310 (736)
....+-+|++. .+.|+|++.|||+=.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 45678888876 44599999999974446889888877654
No 95
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=44.79 E-value=2.3e+02 Score=29.19 Aligned_cols=59 Identities=5% Similarity=-0.034 Sum_probs=40.0
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEcc
Q 004692 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (736)
Q Consensus 265 ~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (736)
-+...++.+++.......+.|.|++++||+=.-+++.+.+++..|.+.+.+.-+..+..
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 45667777777652111246899999999977788999999988875433334455543
No 96
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=38.99 E-value=23 Score=30.50 Aligned_cols=30 Identities=20% Similarity=-0.041 Sum_probs=18.2
Q ss_pred ccccCCCc---cchHHHHHHHHHCCcEEEEeCC
Q 004692 439 VGFSYQSV---SEDFFTGFILHCKGWTSTYLDP 468 (736)
Q Consensus 439 ~G~~~~si---tED~~t~~rl~~~Gwrs~y~~~ 468 (736)
+||+..-. -||.+...|+..+|.+....+.
T Consensus 35 nGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 35 NGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp TSS-SS-TSCSSHHHHHHHHHHHTT---B-SST
T ss_pred CCCCccccccCccHHHHHHHHHHcCCeEEecCC
Confidence 45554433 4999999999999998776554
No 97
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=32.41 E-value=4.6e+02 Score=27.47 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=27.8
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEe--CCCCCCCchHHHHHHHHhhc
Q 004692 267 KGGALNVLLRVSGVISNSPYILGL--DCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 267 KAGaLN~al~~s~~~s~g~~Il~~--DAD~~~~~p~~L~~~v~~f~ 310 (736)
...++..+++... ...+++++.+ |.|--+. .|+++++-.+..
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 97 HRDAMRRAINAAR-RDGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred HHHHHHHHHhhhc-cCCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 5567777764311 1345666655 9977765 999988877764
No 98
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=29.21 E-value=2e+02 Score=31.65 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=25.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHH
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L 302 (736)
.+.+..=-|..+.. ..+.++++=+||||+- +++-|
T Consensus 159 ~n~l~~YYNy~ls~---ipk~~w~iKID~DhIy-~~~KL 193 (347)
T PF06306_consen 159 ENSLYNYYNYVLSF---IPKNEWAIKIDADHIY-DTKKL 193 (347)
T ss_pred hhhhhhhhhhhhcc---cccceEEEEeccceee-cHHHH
Confidence 44566677777765 2578999999999984 46554
No 99
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=28.51 E-value=1.2e+02 Score=27.51 Aligned_cols=25 Identities=20% Similarity=0.480 Sum_probs=18.6
Q ss_pred HHHHHHcCCCCCCceEEEEEcCCCCc
Q 004692 117 TVLSAMALDYPVDKLHVYLSDDGGSP 142 (736)
Q Consensus 117 Tv~s~~~~dYP~~kl~v~v~DDg~~~ 142 (736)
+...-+..+||..|+ |+|-|||..|
T Consensus 53 ~~i~~i~~~fP~~kf-iLIGDsgq~D 77 (100)
T PF09949_consen 53 DNIERILRDFPERKF-ILIGDSGQHD 77 (100)
T ss_pred HHHHHHHHHCCCCcE-EEEeeCCCcC
Confidence 333334468998776 9999999998
No 100
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=27.66 E-value=2.2e+02 Score=32.11 Aligned_cols=67 Identities=12% Similarity=0.170 Sum_probs=42.4
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCc
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p 172 (736)
.-|+|+.+-|+ .|+++.+-.+-+++.. +.-|+ +++.++|.+.++.--... -+||+-++|.|
T Consensus 342 s~~~V~L~Y~~---~n~e~~~y~~eLr~~~-qkl~~--~~lHiiDSs~~g~l~~e~-------------ler~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCS---RNWEEALYAEELRALA-QKLPN--VVLHIIDSSKDGYLDQED-------------LERYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEe---cCCchhHHHHHHHHHH-hcCCC--eEEEEecCCCCCccCHHH-------------hhccccccCcc
Confidence 56899999999 8888667777777654 44455 566666555554221111 12455567777
Q ss_pred cccccc
Q 004692 173 QAYFSE 178 (736)
Q Consensus 173 ~~yf~~ 178 (736)
..||=+
T Consensus 403 sv~fCG 408 (438)
T COG4097 403 SVFFCG 408 (438)
T ss_pred eEEEEc
Confidence 878743
No 101
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=26.08 E-value=2.3e+02 Score=27.42 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
..+-.+.+..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 45678899999987 5689999999999444589998888766
No 102
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=25.35 E-value=2.4e+02 Score=29.77 Aligned_cols=27 Identities=22% Similarity=0.229 Sum_probs=21.8
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 282 SNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 282 s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
++.+..+.+|-|++++ .+-|++.+.-|
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC
Confidence 5679999999999986 88888888766
No 103
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=23.06 E-value=2.9e+02 Score=31.41 Aligned_cols=36 Identities=28% Similarity=0.118 Sum_probs=28.2
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004692 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 267 KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~ 307 (736)
|--|+|.|=. --++||++.|+|..+.++|.|.-.|.
T Consensus 98 Keea~~~~r~-----~~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 98 KEEALNWARS-----GWADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHh-----hhcceeEEeehhheeeCCchHhHHHh
Confidence 5567777654 34799999999999999999876654
No 104
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=22.79 E-value=2.9e+02 Score=27.70 Aligned_cols=46 Identities=17% Similarity=0.078 Sum_probs=33.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004692 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D 311 (736)
..+.++++-+|+.... .+.+.+++++||+..-+++.+.+++..+.+
T Consensus 72 ~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 72 QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 3578999999998622 126889999999932247888888877754
No 105
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=22.62 E-value=2e+02 Score=28.73 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 269 GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 269 GaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
.+++-+.+.. .+.+||+-.|-|++++ ++.|.+.+.-.
T Consensus 69 ~~~~w~~~~c---~~~~~v~k~DDD~~vn-~~~l~~~L~~~ 105 (195)
T PF01762_consen 69 AGLKWASKHC---PNAKYVLKVDDDVFVN-PDRLVSFLKSL 105 (195)
T ss_pred HHHHHHHhhC---CchhheeecCcEEEEe-hHHhhhhhhhc
Confidence 4566666651 4589999999999985 77776655433
No 106
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=22.52 E-value=2.9e+02 Score=27.70 Aligned_cols=42 Identities=14% Similarity=-0.018 Sum_probs=33.1
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004692 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 265 ~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~ 310 (736)
.+-.+++-.|++. .+.+.+++++||+=.-+++.+++++..+.
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4556788888887 56799999999997667889988877654
No 107
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=22.47 E-value=3.2e+02 Score=31.91 Aligned_cols=82 Identities=17% Similarity=0.331 Sum_probs=48.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcC---Cc---------hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChh
Q 004692 648 SSVFLVPMVSLMILNVAALVCGVIRMIAVG---NW---------DKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPS 715 (736)
Q Consensus 648 ~s~~~~P~~~l~ll~l~aiv~gi~r~~~~~---~~---------~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p~~ 715 (736)
.+..+.+.+. .+|.+++++-.+..++... .| ++++ +....=+++|..=.-|++.|+.+..+|.+
T Consensus 88 c~r~l~~~~~-~~L~l~aflSPiaflvLP~il~~~~~~~C~~~CeGll---islafKLliLlig~WAlf~R~~~a~lPRi 163 (505)
T PF06638_consen 88 CSRYLGLILA-SILGLLAFLSPIAFLVLPKILWRWQLEPCGAECEGLL---ISLAFKLLILLIGTWALFFRRPRADLPRI 163 (505)
T ss_pred cceeHHHHHH-HHHHHHHHHhhHHHHHhcccccCccccccCCccccee---HHHHHHHHHHHHHHHHHhcCcccCCCchh
Confidence 3444434333 4556666666665555321 11 2222 22233333333345567889999999999
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 004692 716 AILLSSVFFVTFLFFGSI 733 (736)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ 733 (736)
-+..+.+++++|++.-++
T Consensus 164 f~fRa~ll~Lvfl~~~sy 181 (505)
T PF06638_consen 164 FVFRALLLVLVFLFLFSY 181 (505)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999888875543
No 108
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=22.36 E-value=2.4e+02 Score=31.63 Aligned_cols=36 Identities=33% Similarity=0.481 Sum_probs=25.4
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHH
Q 004692 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ 304 (736)
Q Consensus 267 KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~ 304 (736)
.-.+|+..++..+ +..+|+|++-|.|-+ |+|++|+.
T Consensus 163 qR~~l~~l~~~~~-~~~dDliivSDvDEI-P~p~~l~~ 198 (356)
T PF04724_consen 163 QRNALNGLLRLAG-IQDDDLIIVSDVDEI-PSPETLKF 198 (356)
T ss_pred HHHHHHHHhhhcC-CCCCCEEEEcCcccc-cCHHHHHH
Confidence 3345655555444 367899999999998 56888743
No 109
>PF03213 Pox_P35: Poxvirus P35 protein; InterPro: IPR004900 The Poxvirus P35 protein is an immunodominant envelope protein. It binds to heparan sulphate on the cell surface to provide virion attachment to target cell [].; GO: 0019031 viral envelope
Probab=21.56 E-value=5.8e+02 Score=28.07 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=37.6
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccC
Q 004692 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNF 330 (736)
Q Consensus 282 s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~ 330 (736)
...+||++++-|+.+.++..++.++.-|.+.+ +-++|-...++|.
T Consensus 117 ~~~~yivVvEddnT~~~~~~l~~~I~aM~~k~----idilQLre~~~~~ 161 (325)
T PF03213_consen 117 PEDKYIVVVEDDNTLRDITTLHPIIKAMKKKN----IDILQLRETYHNS 161 (325)
T ss_pred CCCCeEEEEeCCCcccccHHHHHHHHHHHHcC----ceEEEEehhhhcc
Confidence 56789999999999988999988888887544 8999987777764
No 110
>PF15050 SCIMP: SCIMP protein
Probab=21.38 E-value=1.1e+02 Score=28.62 Aligned_cols=40 Identities=10% Similarity=0.238 Sum_probs=21.4
Q ss_pred cccchhhhHHHHHHHHHHH-----HHHHHHHHHhcCCCcceeeccC
Q 004692 588 TWRNEQRIWMIKSVTSHFY-----GSMDAIMKLLGLRKASFLPTNK 628 (736)
Q Consensus 588 ~ww~~~~~w~i~~~~~~~~-----~~~~al~~~l~~~~~~F~VT~K 628 (736)
+||++ .+|++.+++.-+. .++-.+..++..+..+|+++.-
T Consensus 2 ~WWr~-nFWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiakp 46 (133)
T PF15050_consen 2 SWWRD-NFWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAKP 46 (133)
T ss_pred chHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceeccc
Confidence 47766 4776655521111 1112234555567788999864
No 111
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=20.99 E-value=2.5e+02 Score=27.24 Aligned_cols=43 Identities=14% Similarity=-0.044 Sum_probs=31.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004692 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 265 ~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~ 310 (736)
.+-++++-.|++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 3567778888872 156789999999994335889988887664
No 112
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=20.43 E-value=2.1e+02 Score=28.29 Aligned_cols=42 Identities=12% Similarity=0.040 Sum_probs=33.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004692 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 265 ~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~ 310 (736)
.+-.+++..+++. .+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 74 PGPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 3556788888886 67899999999994446899988887664
Done!