Query 004692
Match_columns 736
No_of_seqs 323 out of 2034
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 02:47:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 1E-55 3.5E-60 529.5 53.4 509 19-713 65-583 (802)
2 1xhb_A Polypeptide N-acetylgal 99.8 2.8E-18 9.7E-23 193.0 19.7 238 91-506 25-300 (472)
3 2z86_A Chondroitin synthase; G 99.8 2.2E-18 7.4E-23 200.6 19.3 213 93-483 91-337 (625)
4 3bcv_A Putative glycosyltransf 99.8 2.3E-18 7.8E-23 174.6 14.6 110 93-312 3-112 (240)
5 1qg8_A Protein (spore coat pol 99.7 1.9E-18 6.3E-23 177.1 9.3 218 95-494 1-235 (255)
6 2d7i_A Polypeptide N-acetylgal 99.7 2.2E-17 7.6E-22 190.7 17.5 238 92-506 109-378 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.7 3E-17 1E-21 186.4 13.3 113 91-312 62-174 (501)
8 2z86_A Chondroitin synthase; G 99.7 9.3E-17 3.2E-21 186.8 14.9 221 93-499 373-598 (625)
9 3ckj_A Putative uncharacterize 99.6 1.8E-15 6.2E-20 162.7 13.3 123 92-325 45-170 (329)
10 3l7i_A Teichoic acid biosynthe 99.5 2.4E-15 8.1E-20 178.5 0.0 110 95-312 2-111 (729)
11 4fix_A UDP-galactofuranosyl tr 99.5 1E-13 3.5E-18 162.4 13.8 125 93-323 178-304 (657)
12 3f1y_A Mannosyl-3-phosphoglyce 99.4 1.4E-12 4.8E-17 143.7 14.5 121 93-323 92-216 (387)
13 2fy7_A Beta-1,4-galactosyltran 99.4 8.2E-13 2.8E-17 139.9 10.6 62 438-499 189-263 (287)
14 2nxv_A ATP synthase subunits r 99.1 1.8E-10 6E-15 118.9 12.2 47 267-322 62-113 (249)
15 2bo4_A Mannosylglycerate synth 98.8 1.7E-07 5.9E-12 103.3 18.1 42 264-310 73-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 98.1 1.3E-05 4.3E-10 87.8 11.2 38 264-307 142-182 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 98.0 1.1E-05 3.9E-10 86.3 9.9 44 93-145 51-94 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 97.6 7.2E-05 2.4E-09 80.8 8.0 45 94-143 1-45 (343)
19 3lw6_A FI08434P, beta-4-galact 83.7 7.5 0.00025 40.4 11.5 53 447-499 185-250 (287)
20 3q80_A 2-C-methyl-D-erythritol 37.3 73 0.0025 31.5 7.6 45 267-311 83-127 (231)
21 3d5n_A Q97W15_sulso; NESG, SSR 23.4 1.5E+02 0.0053 27.9 7.0 41 266-309 72-112 (197)
22 2y6p_A 3-deoxy-manno-octuloson 20.2 1.1E+02 0.0039 29.3 5.3 41 265-311 72-113 (234)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1e-55 Score=529.55 Aligned_cols=509 Identities=20% Similarity=0.294 Sum_probs=386.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCC-CchhHHHHHHHHHHHHHHHHHHHHHhhhheeeccccCCCCCCCCCCCCCce
Q 004692 19 INRLHALLHCIAIGFLIYYRASYLLQET-RAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI 97 (736)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~wR~~~~l~~~-~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V 97 (736)
+..+++.+.+++.+.|++||++.+++.. .....+++++++++|++..+.|+++.+..++|..|...++. .+++.|+|
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~V 142 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPTV 142 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCCE
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCcE
Confidence 3444455555567789999999999854 35567888999999999999999999999999888765543 35678999
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccccc
Q 004692 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+++++++|+.|+++++||+++++|+|+|||++|.|.+.
T Consensus 143 SViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------ 189 (802)
T 4hg6_A 143 DILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------ 189 (802)
T ss_dssp EEEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------------
T ss_pred EEEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc------------------------------
Confidence 999999 99998888999999999999999999999999999977531
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEecc
Q 004692 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~ 257 (736)
.+++.+++..+..+..+++..+ .++.|+.|+
T Consensus 190 --------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~~ 220 (802)
T 4hg6_A 190 --------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTRE 220 (802)
T ss_dssp --------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEECS
T ss_pred --------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEec
Confidence 1122222221111111111111 025788887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCC----
Q 004692 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNE---- 332 (736)
Q Consensus 258 k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq~f~n~~~---- 332 (736)
++ +++|+||+|.|++. ++||||+++|||++++ ||++++++.+| .||+ +++||+++.+.|.+.
T Consensus 221 ~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~~~~~~~ 287 (802)
T 4hg6_A 221 RN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINPDPIQRN 287 (802)
T ss_dssp SC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSCCHHHHH
T ss_pred CC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCCchHhhh
Confidence 64 67999999999999 8999999999999975 99999999999 4666 999999999987531
Q ss_pred ---CchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccC
Q 004692 333 ---HDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (736)
Q Consensus 333 ---~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 409 (736)
-+.+.++.+.++...+.+.+.+++++++|+++++||+++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~------------------------------------- 330 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD------------------------------------- 330 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH-------------------------------------
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH-------------------------------------
Confidence 1223345567889999999999999999999999999992
Q ss_pred CccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhH
Q 004692 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~ 489 (736)
+.+||+.++++||.+++++++++||++.|+++ +.+.+.+|+|++++++||.
T Consensus 331 ---------------------------~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~ 381 (802)
T 4hg6_A 331 ---------------------------EAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRG 381 (802)
T ss_dssp ---------------------------HHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHH
T ss_pred ---------------------------HcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHH
Confidence 24689999999999999999999999999986 7899999999999999999
Q ss_pred HHhcccchhhhhhcCCcccCCCCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcccccChhhHHHHHHHHH
Q 004692 490 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFL 569 (736)
Q Consensus 490 RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i 569 (736)
||++|.+|+++ +++|++. +++++.||++|+...+++ +.+++.++++++|++++++|.+++......++.+++.+++
T Consensus 382 RW~~G~~q~l~-~~~pl~~--~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l 457 (802)
T 4hg6_A 382 RWATGMMQMLL-LKNPLFR--RGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLA 457 (802)
T ss_dssp HHHHHHHHHHH-HSCTTSC--SSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHH
T ss_pred HHHccHHHHHH-HhCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHH
Confidence 99999999998 5578774 689999999999988888 8889999999999999999998876544443333332222
Q ss_pred HHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccchhhhhhccccceeeeccc
Q 004692 570 SAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSS 649 (736)
Q Consensus 570 ~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s 649 (736)
...+ +.... .+.....||++. + .+...++.+...+..++++++.+|+||+|+...++ . .| +
T Consensus 458 ~~~~--~~~~~-~~~~r~~~~~~l----~-~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~--~~---~ 518 (802)
T 4hg6_A 458 VSFL--VQNAL-FARQRWPLVSEV----Y-EVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE------N--YI---S 518 (802)
T ss_dssp HHHH--HHHHH-HTTTSCTTHHHH----H-HHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------C--CB---C
T ss_pred HHHH--HHHHH-hcCcHHHHHHHH----H-HHHHHHHHHHHHHHHHhCCCCCcceECCCCccccc------c--ch---h
Confidence 2111 11122 233334466542 2 22244555566667778899999999999986543 1 11 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004692 650 VFLVPMVSLMILNVAALVCGVIRMIAVGN-WDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 713 (736)
Q Consensus 650 ~~~~P~~~l~ll~l~aiv~gi~r~~~~~~-~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p 713 (736)
..+.|++++++++++++++|++++..... .....++++|++++++.+.+.+....-|+.+++-|
T Consensus 519 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~ 583 (802)
T 4hg6_A 519 PIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP 583 (802)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 56789999999999999999999876432 33445666777777666666555554444444333
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.78 E-value=2.8e-18 Score=193.04 Aligned_cols=238 Identities=16% Similarity=0.090 Sum_probs=157.9
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc-chhhHHHHHHhhhhhhhhhhhcCCcc
Q 004692 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI-TLHGMREACRFAKWWLPFCRRYGIKT 169 (736)
Q Consensus 91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~-T~~~l~e~~~fa~~wvpfc~~~~v~~ 169 (736)
++.+|.|+|+||+ |||+.+.+.+||.|+++++||...++|+|+|||++|. |.+.+.+..
T Consensus 25 ~~~~p~vSVIIp~---yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~----------------- 84 (472)
T 1xhb_A 25 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYV----------------- 84 (472)
T ss_dssp CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHH-----------------
T ss_pred CcCCCCeEEEEEe---CCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHH-----------------
Confidence 3568999999999 9998779999999999999998678999999999984 654322210
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcC
Q 004692 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p 249 (736)
...|
T Consensus 85 ----------------------------------------------------------------------------~~~~ 88 (472)
T 1xhb_A 85 ----------------------------------------------------------------------------KKLK 88 (472)
T ss_dssp ----------------------------------------------------------------------------HSSS
T ss_pred ----------------------------------------------------------------------------HHCC
Confidence 0123
Q ss_pred -eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCcee
Q 004692 250 -LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKF 327 (736)
Q Consensus 250 -~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f 327 (736)
++.++..++ +.|+++|+|.|++. ++||+|+++|+|..++ |++|.+++..+. ++. ++.+.. ...
T Consensus 89 ~~v~vi~~~~-----n~G~~~a~N~g~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~~~----~~v~~~-~~~ 153 (472)
T 1xhb_A 89 VPVHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDRR----TVVCPI-IDV 153 (472)
T ss_dssp SCEEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCTT----EEEEEE-EEE
T ss_pred CcEEEEECCC-----CCChHHHHHHHHHh----ccCCeEEEECCCeEeC-ccHHHHHHHHHHhCCC----EEEEee-eee
Confidence 467777655 35799999999999 8999999999999865 999999999886 333 443321 111
Q ss_pred ccCCCC------chhhhh--hhhhhhh------hHhhh--h---hcCCccccccccceehhhccCCccccccchHhhHhh
Q 004692 328 HNFNEH------DIYDGS--LRSGYRL------QWPGM--D---GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDT 388 (736)
Q Consensus 328 ~n~~~~------d~~~~~--~~~f~~~------~~~g~--d---~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~ 388 (736)
.+.+.- ...... ....+.. ....+ + ....+...|.+.++||+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~---------------- 217 (472)
T 1xhb_A 154 ISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQ---------------- 217 (472)
T ss_dssp ECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHH----------------
T ss_pred EcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHH----------------
Confidence 111000 000000 0000000 00000 1 22234556777789999882
Q ss_pred hcCchhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCc---cchHHHHHHHHHCCcEEEE
Q 004692 389 FGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV---SEDFFTGFILHCKGWTSTY 465 (736)
Q Consensus 389 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~si---tED~~t~~rl~~~Gwrs~y 465 (736)
+.+||+.+.. .||++.++|+...|+++.|
T Consensus 218 ------------------------------------------------~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~ 249 (472)
T 1xhb_A 218 ------------------------------------------------EIGTYDAGMDIWGGENLEISFRIWQCGGTLEI 249 (472)
T ss_dssp ------------------------------------------------HTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEE
T ss_pred ------------------------------------------------HcCCCCCcccccCchhHHHHHHHHhcCCeEEE
Confidence 2356877654 7999999999999999999
Q ss_pred eCCCCCeeEe----ccCc----C-----HHHHHHhhHHHhcccchhhhhhcCCc
Q 004692 466 LDPSRPQFLG----TSTT----N-----LNDVLIQGTRWASGLIDVSISRFCPL 506 (736)
Q Consensus 466 ~~~~~~~~~g----~aP~----t-----l~~~l~Qr~RWa~G~~qi~~~~~~p~ 506 (736)
++.. .+.- ..|. . .....+...||..+..+.++. .+|.
T Consensus 250 ~p~~--~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~-~~p~ 300 (472)
T 1xhb_A 250 VTCS--HVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYI-ISPG 300 (472)
T ss_dssp EEEE--EEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHH-TSTT
T ss_pred ccCc--EEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh-hCcc
Confidence 9752 2211 1222 1 456777788999999988874 4553
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.78 E-value=2.2e-18 Score=200.56 Aligned_cols=213 Identities=16% Similarity=0.132 Sum_probs=145.6
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCc
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+||.|+++++||. .++|+|+|||++|.|.+.+.+ +
T Consensus 91 ~~p~vsviIp~---~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~--------------~------- 144 (625)
T 2z86_A 91 IIDGLSIVIPT---YNRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE--------------F------- 144 (625)
T ss_dssp CCCCEEEEEEE---SSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT--------------T-------
T ss_pred cCCcEEEEEec---CCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHH--------------h-------
Confidence 35899999999 9997 89999999999999986 699999999999976432111 0
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEE
Q 004692 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
. ..+.+.
T Consensus 145 ---------------------------------------~----------------------------------~~~~i~ 151 (625)
T 2z86_A 145 ---------------------------------------E----------------------------------SLLNIK 151 (625)
T ss_dssp ---------------------------------------T----------------------------------TTSCEE
T ss_pred ---------------------------------------h----------------------------------hcCCeE
Confidence 0 012467
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCC
Q 004692 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n~~ 331 (736)
|+.++++ .++|++|+|.|++. ++||+|+++|+|+++ +|++|.+++..|. +|. +++|+..+.+.+..
T Consensus 152 ~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~-~~~~l~~~~~~~~~~~~----~~~~g~~~~~~~~~ 218 (625)
T 2z86_A 152 YVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAP-NPLWVQSYMELLAVDDN----VALIGPRKYIDTSK 218 (625)
T ss_dssp EEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEE-CTTHHHHHHHHHHHCTT----EEEECCEEEECCTT
T ss_pred EEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCCC-CHHHHHHHHHHHhcCCc----eEEEEeeeeccCcc
Confidence 7776432 45899999999999 899999999999997 5999999999886 444 78887665554321
Q ss_pred CC-chhhhhhhh------------hhh---------h---hHhhhhh---cC--CccccccccceehhhccCCccccccc
Q 004692 332 EH-DIYDGSLRS------------GYR---------L---QWPGMDG---LK--GPFLTGTGHYIRRESLYGNFKHKGID 381 (736)
Q Consensus 332 ~~-d~~~~~~~~------------f~~---------~---~~~g~d~---~~--~~~~~Gtg~~~RR~aL~~~~~~~~~d 381 (736)
.. ..+...... +.. . .....+. .. ...++|++.++||+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~--------- 289 (625)
T 2z86_A 219 HTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLF--------- 289 (625)
T ss_dssp CCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHH---------
T ss_pred cchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHH---------
Confidence 00 000000000 000 0 0000000 11 12467888899999882
Q ss_pred hHhhHhhhcCchhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCc---cchHHHHHHHHH
Q 004692 382 LAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV---SEDFFTGFILHC 458 (736)
Q Consensus 382 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~si---tED~~t~~rl~~ 458 (736)
+.|||+.+.. .||.++++|+++
T Consensus 290 -------------------------------------------------------~iGgfde~~~~~g~ED~dl~~Rl~~ 314 (625)
T 2z86_A 290 -------------------------------------------------------RAGWFDEEFTHWGGEDNEFGYRLYR 314 (625)
T ss_dssp -------------------------------------------------------HHCCCCTTCSSCCCHHHHHHHHHHH
T ss_pred -------------------------------------------------------HhCCCccccccCCcchhhhhhhHHh
Confidence 2467887764 599999999999
Q ss_pred CCcEEEEeCCCCCeeEeccCcCHHH
Q 004692 459 KGWTSTYLDPSRPQFLGTSTTNLND 483 (736)
Q Consensus 459 ~Gwrs~y~~~~~~~~~g~aP~tl~~ 483 (736)
+||++.|+++ +.+....|.+-..
T Consensus 315 ~G~~i~~~p~--~~v~H~~~~~~~~ 337 (625)
T 2z86_A 315 EGCYFRSVEG--AMAYHQEPPGKEN 337 (625)
T ss_dssp TTCEEEECGG--GCEEEECCC----
T ss_pred CCceEEEccc--chhhccCCccccc
Confidence 9999999986 5666666665443
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.77 E-value=2.3e-18 Score=174.63 Aligned_cols=110 Identities=16% Similarity=0.120 Sum_probs=89.6
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCc
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p 172 (736)
..|.|+|+||+ ||++ +.+.+||.|+++++||. ++|+|+|||++|.|.+.+.+.++
T Consensus 3 ~~p~vsViIp~---yn~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~------------------- 57 (240)
T 3bcv_A 3 LIPKVSVIVPI---YNVE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAA------------------- 57 (240)
T ss_dssp CCCSEEEEEEE---SSCT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHH-------------------
T ss_pred CCCcEEEEEec---CCCH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHh-------------------
Confidence 35899999999 9998 79999999999999984 89999999999987543322110
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEE
Q 004692 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
..|++.
T Consensus 58 --------------------------------------------------------------------------~~~~i~ 63 (240)
T 3bcv_A 58 --------------------------------------------------------------------------QYPNIK 63 (240)
T ss_dssp --------------------------------------------------------------------------HCSSEE
T ss_pred --------------------------------------------------------------------------hCCCEE
Confidence 113467
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004692 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~ 312 (736)
++.. + +.|+++|.|.|++. ++||||+++|+|.++. |++|.+++..+.++
T Consensus 64 ~i~~-~-----n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~~-~~~l~~l~~~~~~~ 112 (240)
T 3bcv_A 64 VIHK-K-----NAGLGMACNSGLDV----ATGEYVAFCDSDDYVD-SDMYMTMYNVAQKY 112 (240)
T ss_dssp EEEC-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCCCC-TTHHHHHHHHHHHH
T ss_pred EEEC-C-----CCChHHHHHHHHHH----cCCCEEEEECCCCcCC-HHHHHHHHHHHHhc
Confidence 7753 2 46899999999999 8999999999999874 99999999988753
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.74 E-value=1.9e-18 Score=177.14 Aligned_cols=218 Identities=14% Similarity=0.074 Sum_probs=139.3
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccc
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~ 174 (736)
|.|+|+||| ||++ +.+.+||.|+++++||. ++|+|+|||++|.|.+.+.+.
T Consensus 1 p~vSViIp~---yn~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~----------------------- 51 (255)
T 1qg8_A 1 PKVSVIMTS---YNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPF----------------------- 51 (255)
T ss_dssp CCEEEEEEE---SSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGG-----------------------
T ss_pred CeEEEEEEc---CCCH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHH-----------------------
Confidence 789999999 9998 79999999999999994 899999999999664321110
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEE
Q 004692 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
. ..|++.|+
T Consensus 52 -------------------------------------~----------------------------------~~~~i~~i 60 (255)
T 1qg8_A 52 -------------------------------------L----------------------------------NDNRVRFY 60 (255)
T ss_dssp -------------------------------------G----------------------------------GSTTEEEE
T ss_pred -------------------------------------h----------------------------------hcCCEEEE
Confidence 0 01346777
Q ss_pred eccCCCC----CCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceec-
Q 004692 255 SREKSPE----HLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFH- 328 (736)
Q Consensus 255 ~R~k~p~----~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~- 328 (736)
..+.. + ..+.++++|+|.|++. ++||||+++|+|.++. |++|.+++..+. +|+ +++|.+.....
T Consensus 61 ~~~~~-~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~ 130 (255)
T 1qg8_A 61 QSDIS-GVKERTEKTRYAALINQAIEM----AEGEYITYATDDNIYM-PDRLLKMVRELDTHPE----KAVIYSASKTYH 130 (255)
T ss_dssp ECCCC-SHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTEEEC-TTHHHHHHHHHHHCTT----CCEEEEEEEEEE
T ss_pred ecccc-cccccccccCHHHHHHHHHHH----cCCCEEEEeCCCCccC-hHHHHHHHHHHHhCCC----ceEEEeceEEEE
Confidence 66510 0 0145899999999999 8999999999999975 999999999886 444 77887765544
Q ss_pred -cCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccc
Q 004692 329 -NFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKN 407 (736)
Q Consensus 329 -n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~ 407 (736)
+.+. ...... +... ............|++.++||+++.
T Consensus 131 ~~~~~-~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~rr~~~~----------------------------------- 169 (255)
T 1qg8_A 131 LNENR-DIVKET----VRPA-AQVTWNAPCAIDHCSVMHRYSVLE----------------------------------- 169 (255)
T ss_dssp EC----CEEEEE----EECC-CSCBSCCTTTSCGGGEEEETHHHH-----------------------------------
T ss_pred eCCCC-cchhhc----cCch-HHHHHhhcCCCccceEEEEHHHHH-----------------------------------
Confidence 3211 111100 0000 000112234457888999999982
Q ss_pred cCCccchhhHHhhccccccceeeccccccccc-cc------c-CCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCc
Q 004692 408 VNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GF------S-YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 479 (736)
Q Consensus 408 ~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~-G~------~-~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~ 479 (736)
+.+ || + .....||.+..+++..+| +..|+++. ...+-..+.
T Consensus 170 -----------------------------~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~-~~~~r~~~~ 218 (255)
T 1qg8_A 170 -----------------------------KVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEE-LDLNYITDQ 218 (255)
T ss_dssp -----------------------------HHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEE-EEEEEEC--
T ss_pred -----------------------------hhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCc-EEEEEEcCC
Confidence 112 34 2 224689999999999987 68888762 334455667
Q ss_pred CHHHHH--HhhHHHhcc
Q 004692 480 NLNDVL--IQGTRWASG 494 (736)
Q Consensus 480 tl~~~l--~Qr~RWa~G 494 (736)
+..... +|+.||.+.
T Consensus 219 s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 219 SIHFQLFELEKNEFVRN 235 (255)
T ss_dssp ------------CTGGG
T ss_pred ccchhHHHHHHHHHHHh
Confidence 666655 455555443
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.73 E-value=2.2e-17 Score=190.75 Aligned_cols=238 Identities=14% Similarity=0.069 Sum_probs=158.8
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc-hhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT-LHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T-~~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
+..|.|+|+||+ |||+.+.+.+||.|+++++||...++|+|+||||+|.| .+.+.+..
T Consensus 109 ~~~P~vSVIIp~---yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~------------------ 167 (570)
T 2d7i_A 109 ETLPNTSIIIPF---HNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM------------------ 167 (570)
T ss_dssp SSCCCEEEEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH------------------
T ss_pred CCCCCeEEEEEE---CCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH------------------
Confidence 568999999999 99986799999999999999975679999999999987 32221110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
...|+
T Consensus 168 ---------------------------------------------------------------------------~~~~~ 172 (570)
T 2d7i_A 168 ---------------------------------------------------------------------------ALFPS 172 (570)
T ss_dssp ---------------------------------------------------------------------------TTSTT
T ss_pred ---------------------------------------------------------------------------HhCCe
Confidence 01245
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEccCceeccC
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNF 330 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~ 330 (736)
+.++..++ +.++++|+|.|++. ++||+|+++|+|..+ +|++|.+++..+.+.. ++ .|.....+.+.
T Consensus 173 v~vi~~~~-----n~G~~~A~N~G~~~----A~gd~i~fLD~D~~~-~p~~L~~ll~~l~~~~---~~-vv~~~i~~~~~ 238 (570)
T 2d7i_A 173 VRILRTKK-----REGLIRTRMLGASV----ATGDVITFLDSHCEA-NVNWLPPLLDRIARNR---KT-IVCPMIDVIDH 238 (570)
T ss_dssp EEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEECCSSEEE-CTTCSHHHHHHHHHCT---TE-EEEEEEEEECT
T ss_pred EEEEECCC-----CCCHHHHHHHHHHh----cCCCEEEEEcCCccc-cccHHHHHHHHHHhCC---CE-EEeeeeeccCC
Confidence 77776655 46899999999999 899999999999997 5999999999886432 23 33221122211
Q ss_pred CC-------Cchhhh--hhhhhhhhhHhh--------hhhcCCccccccccceehhhccCCccccccchHhhHhhhcCch
Q 004692 331 NE-------HDIYDG--SLRSGYRLQWPG--------MDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESN 393 (736)
Q Consensus 331 ~~-------~d~~~~--~~~~f~~~~~~g--------~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~ 393 (736)
+. ...... ....++...... ......+..+|.+.++||+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~--------------------- 297 (570)
T 2d7i_A 239 DDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFW--------------------- 297 (570)
T ss_dssp TTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHH---------------------
T ss_pred CchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHH---------------------
Confidence 00 000000 000111110000 0112234566888889999882
Q ss_pred hHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCc---cchHHHHHHHHHCCcEEEEeCCCC
Q 004692 394 LFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV---SEDFFTGFILHCKGWTSTYLDPSR 470 (736)
Q Consensus 394 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~si---tED~~t~~rl~~~Gwrs~y~~~~~ 470 (736)
+.+||+.+.. .||+++++|+..+||+++|++..
T Consensus 298 -------------------------------------------~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~- 333 (570)
T 2d7i_A 298 -------------------------------------------ELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCS- 333 (570)
T ss_dssp -------------------------------------------HTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEE-
T ss_pred -------------------------------------------hcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCe-
Confidence 2356877654 69999999999999999999752
Q ss_pred CeeE----eccCcC-------HHHHHHhhHHHhcccchhhhhhcCCc
Q 004692 471 PQFL----GTSTTN-------LNDVLIQGTRWASGLIDVSISRFCPL 506 (736)
Q Consensus 471 ~~~~----g~aP~t-------l~~~l~Qr~RWa~G~~qi~~~~~~p~ 506 (736)
.+. +..|.+ .+...+...||....-+.+.. .+|.
T Consensus 334 -~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~-~~p~ 378 (570)
T 2d7i_A 334 -RVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQ-RRPE 378 (570)
T ss_dssp -EEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHT-TCGG
T ss_pred -EEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh-cCcc
Confidence 222 123311 456677778999998888774 3453
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.71 E-value=3e-17 Score=186.41 Aligned_cols=113 Identities=15% Similarity=0.071 Sum_probs=93.1
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
++..|.|+|+||+ |||+...+.+||.|++++.||...++|+|+||||+|.|...+.
T Consensus 62 ~~~~p~vSVIIp~---yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~--------------------- 117 (501)
T 2ffu_A 62 RVDLPATSVVITF---HNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL--------------------- 117 (501)
T ss_dssp CSSCCCEEEEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG---------------------
T ss_pred CcCCCCEEEEEEe---CcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH---------------------
Confidence 4568999999999 9998558999999999999997667999999999997642100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
...|+
T Consensus 118 ---------------------------------------------------------------------------~~~~~ 122 (501)
T 2ffu_A 118 ---------------------------------------------------------------------------GKIEK 122 (501)
T ss_dssp ---------------------------------------------------------------------------GGBTT
T ss_pred ---------------------------------------------------------------------------hcCCC
Confidence 01235
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~ 312 (736)
+.++..++ +.|+++|+|.|++. ++||+|+++|+|..++ |++|.+++..+.+.
T Consensus 123 v~vi~~~~-----n~G~~~A~N~G~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 123 VRVLRNDR-----REGLMRSRVRGADA----AQAKVLTFLDSHCECN-EHWLEPLLERVAED 174 (501)
T ss_dssp EEEEECSS-----CCHHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCHHHHHHHHHHC
T ss_pred EEEEECCC-----CcCHHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhC
Confidence 77887655 35799999999999 8999999999999975 99999999988643
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.69 E-value=9.3e-17 Score=186.77 Aligned_cols=221 Identities=19% Similarity=0.202 Sum_probs=154.4
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCc
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+||.|+++++||. ++|+|+|||++|.|.+.+.+..
T Consensus 373 ~~~~vsiii~~---yn~~-~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~-------------------- 426 (625)
T 2z86_A 373 RVPLVSIYIPA---YNCS-KYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHY-------------------- 426 (625)
T ss_dssp SSCSEEEEEEE---SSCT-TTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHH--------------------
T ss_pred cCCeEEEEEeC---CCCH-HHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHH--------------------
Confidence 46899999999 9997 79999999999999985 8999999999998764332210
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEE
Q 004692 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
...|++.
T Consensus 427 -------------------------------------------------------------------------~~~~~i~ 433 (625)
T 2z86_A 427 -------------------------------------------------------------------------ANHPRVR 433 (625)
T ss_dssp -------------------------------------------------------------------------TTCTTEE
T ss_pred -------------------------------------------------------------------------hhCCcEE
Confidence 0113466
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCC
Q 004692 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFN 331 (736)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~pq~f~n~~ 331 (736)
++. ++ +.|+++|+|.|++. ++||||+++|+|.++ +|++|.+++..|. +|+ +++|.+...+.+.+
T Consensus 434 ~~~-~~-----n~G~~~a~n~g~~~----a~g~~i~~ld~D~~~-~~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~ 498 (625)
T 2z86_A 434 FIS-QK-----NKGIGSASNTAVRL----CRGFYIGQLDSDDFL-EPDAVELCLDEFRKDLS----LACVYTTNRNIDRE 498 (625)
T ss_dssp EEE-EC-----CCCHHHHHHHHHHH----CCSSEEEECCTTCEE-CTTHHHHHHHHHHHCTT----CSEEEEEEEEECTT
T ss_pred EEe-CC-----CCCHHHHHHHHHHh----cCCCEEEEECCCccc-ChhHHHHHHHHHHhCCC----eeEEEeeeEEECCC
Confidence 774 33 45899999999999 899999999999987 5999999998884 555 78887766554432
Q ss_pred CCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccCCc
Q 004692 332 EHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGE 411 (736)
Q Consensus 332 ~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 411 (736)
.. ..... +.......+.+....++|++.++||+++.
T Consensus 499 ~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--------------------------------------- 534 (625)
T 2z86_A 499 GN-LISNG----YNWPIYSREKLTSAMICHHFRMFTARAWN--------------------------------------- 534 (625)
T ss_dssp SC-EEEEC----CCCSSCCHHHHTTSCCCCSCEEEEHHHHT---------------------------------------
T ss_pred CC-EeccC----cccccCCHHHHhhcccCCceEEEEHHHHH---------------------------------------
Confidence 11 11100 00000011223345677888999999882
Q ss_pred cchhhHHhhccccccceeeccccccccccccCC-CccchHHHHHHHHHCCcEEEEeCCCCCeeE---eccCcCHHHHHHh
Q 004692 412 NLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDPSRPQFL---GTSTTNLNDVLIQ 487 (736)
Q Consensus 412 ~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~~~~~~~---g~aP~tl~~~l~Q 487 (736)
+.|||+.. ...||.+..+|+.++| ++.|+++ +... .....+.....+|
T Consensus 535 -------------------------~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~--~~~~~r~h~~~~s~~~~~~~ 586 (625)
T 2z86_A 535 -------------------------LTEGFNESISNAVDYDMYLKLSEVG-PFKHINK--ICYNRVLHGENTSIKKLDIQ 586 (625)
T ss_dssp -------------------------TTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEE--EEEEEECC----CCSSHHHH
T ss_pred -------------------------HhCCCCCccCChHHHHHHHHHHHhC-CEEEeCC--cEEEEEECCCccchhhHHHH
Confidence 24678765 4679999999999999 8999875 3333 2344566667777
Q ss_pred hHHHhcccchhh
Q 004692 488 GTRWASGLIDVS 499 (736)
Q Consensus 488 r~RWa~G~~qi~ 499 (736)
+.+|.+...+.+
T Consensus 587 ~~~~~~~~~~~l 598 (625)
T 2z86_A 587 KENHFKVVNESL 598 (625)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 777766544444
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.62 E-value=1.8e-15 Score=162.73 Aligned_cols=123 Identities=15% Similarity=0.016 Sum_probs=92.0
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCC
Q 004692 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~ 171 (736)
..-|.|+|+||+ |||+ +.+.+||.|+++++||. ..+|+|+||||+|.|.+.+.+ ++.+
T Consensus 45 ~~~~~vSViIp~---yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~--------------~~~~--- 102 (329)
T 3ckj_A 45 KAGRTISVVLPA---LDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVA--------------AGAR--- 102 (329)
T ss_dssp TTTCCEEEEEEE---SSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHH--------------TTCE---
T ss_pred ccCCcEEEEEee---CCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHH--------------hhhh---
Confidence 345999999999 9998 78999999999999994 479999999999987643221 1100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeE
Q 004692 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
+ .+++
T Consensus 103 ---------------------------------------------------------~------------------~~~~ 107 (329)
T 3ckj_A 103 ---------------------------------------------------------V------------------VSRE 107 (329)
T ss_dssp ---------------------------------------------------------E------------------EEHH
T ss_pred ---------------------------------------------------------h------------------ccce
Confidence 0 0001
Q ss_pred EEEe-ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhh-cCCCCCCceEEEccCc
Q 004692 252 VYVS-REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFH-LDPKTSSSLAFVQFPQ 325 (736)
Q Consensus 252 ~yv~-R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~-~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq 325 (736)
.++. .++ +.||++|+|.|++. ++||||+++|+|.+ ++ |++|.+++..+ .+|+ +++|++..
T Consensus 108 ~~~~~~~~-----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~~-p~~l~~l~~~l~~~~~----~~~v~g~~ 170 (329)
T 3ckj_A 108 QALPEVPI-----RPGKGEALWRSLAA----SRGDIVVFVDSDLINPH-PMFVPWLVGPLLTGDG----VHLVKSFY 170 (329)
T ss_dssp HHCTTSCC-----CCSHHHHHHHHHHH----CCCSEEEECCTTEESCC-TTHHHHHHHHHHSCSS----CCEEEEEE
T ss_pred eeeccCCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCcC-hHHHHHHHHHHHhCCC----ccEEEEEe
Confidence 1111 112 56899999999999 89999999999997 54 99999999875 5555 77777643
No 10
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.49 E-value=2.4e-15 Score=178.54 Aligned_cols=110 Identities=14% Similarity=0.158 Sum_probs=0.0
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCccc
Q 004692 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~ 174 (736)
|.|+|+||| ||++ +.+.+||.|+++++||. ++|+|+||||+|.|.+.+.+.++
T Consensus 2 p~vSVIIp~---yN~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~--------------------- 54 (729)
T 3l7i_A 2 NKLTIIVTY---YNAE-EYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIK--------------------- 54 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEc---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHH---------------------
Confidence 789999999 9998 79999999999999994 89999999999977643322110
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEE
Q 004692 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
.++ +++.++
T Consensus 55 -------------------------~~~----------------------------------------------~~i~~i 63 (729)
T 3l7i_A 55 -------------------------DYD----------------------------------------------KNIRFI 63 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------hCC----------------------------------------------CCEEEE
Confidence 000 135666
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004692 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~ 312 (736)
..++ +.|+++|.|.|++. ++||+|+++|+|.++. |++|.+++..+.++
T Consensus 64 ~~~~-----n~G~~~arN~gi~~----A~gdyI~flD~Dd~~~-p~~l~~l~~~l~~~ 111 (729)
T 3l7i_A 64 DLDE-----NSGHAHARNIALEE----VETPYFMFLDADDELA-SYAITFYLEKFNNT 111 (729)
T ss_dssp ----------------------------------------------------------
T ss_pred ECCC-----CCCHHHHHHHHHHh----ccCCEEEEECCCCCCC-hhHHHHHHHHhcCC
Confidence 5544 45799999999998 8999999999999974 99999999988743
No 11
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.49 E-value=1e-13 Score=162.43 Aligned_cols=125 Identities=17% Similarity=0.085 Sum_probs=89.9
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCce-EEEEEcCCCCccch-hhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKL-HVYLSDDGGSPITL-HGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl-~v~v~DDg~~~~T~-~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
.-|+|+|+||| ||++ +.+.+||.|+++++|+.++. +|+|+|||++|.+- ..+.|..
T Consensus 178 ~~pkVSVVIpt---YN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~------------------ 235 (657)
T 4fix_A 178 GTANIAVGIPT---FNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAA------------------ 235 (657)
T ss_dssp SCCCEEEECCB---SSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHH------------------
T ss_pred CCCeEEEEEEe---cCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHH------------------
Confidence 35899999999 9998 79999999999999965544 89999999987421 1111110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
++ ..|+
T Consensus 236 -------------------------------~~-------------------------------------------~~~~ 241 (657)
T 4fix_A 236 -------------------------------AR-------------------------------------------LGSR 241 (657)
T ss_dssp -------------------------------HH-------------------------------------------HGGG
T ss_pred -------------------------------Hh-------------------------------------------cCCC
Confidence 00 0124
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCceEEEcc
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (736)
+.++..+ +.|.|+|.|.|++.+....++|+|+++|+|.+++ |++|.+++.++.+. ++++.|+.
T Consensus 242 I~vI~~~------N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~-pd~L~~ll~~l~~~---~~~~~vg~ 304 (657)
T 4fix_A 242 LSIHDQP------NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLE-PDSILRVLAMHRFA---KAPMLVGG 304 (657)
T ss_dssp EEEEECC------CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEEC-THHHHHHHHHHHHB---SSCCEEEE
T ss_pred EEEEECC------CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccC-hhHHHHHHHHHHhC---CCcEEEEe
Confidence 6777543 3579999999998731112679999999999875 99999999988632 22566643
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.40 E-value=1.4e-12 Score=143.72 Aligned_cols=121 Identities=17% Similarity=0.105 Sum_probs=88.6
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHc--CCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMA--LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~--~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r 170 (736)
..|+|+|+||| |||+ +.+.++|.++.+ ++||.+ .+|+|+||||+|.|.+.+.+. +.+
T Consensus 92 ~~p~vSVVIP~---yNe~-~~l~~~l~sl~~~l~~~~~~-~EIIVVDDgStD~T~~i~~~~--------------~~~-- 150 (387)
T 3f1y_A 92 LGLTVSAVLPS---RNVA-DTVGGIIDEIHALNERAPLI-DQILVVDADSEDGTAGVAASH--------------GAE-- 150 (387)
T ss_dssp HTCCEEEEEEE---SSCT-TTHHHHHHHHHHHHHHSCCC-SEEEEEECSCSSSHHHHHHHT--------------TCE--
T ss_pred CCCeEEEEEEc---CCCH-HHHHHHHHHHHHHHhcCCCC-eEEEEEcCcCCccHHHHHHHh--------------Cch--
Confidence 35999999999 9998 789999999987 478753 799999999999886432211 100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
++. +.
T Consensus 151 ----------------------------------------------------------v~~-----------------~~ 155 (387)
T 3f1y_A 151 ----------------------------------------------------------VYS-----------------EN 155 (387)
T ss_dssp ----------------------------------------------------------EEE-----------------GG
T ss_pred ----------------------------------------------------------hcc-----------------cc
Confidence 000 00
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhhc-CCCCCCceEEEcc
Q 004692 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKTSSSLAFVQF 323 (736)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~-~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 323 (736)
++++..++ +.||++|+|.|++. ++||+|+++|||.. ++ |++|.+++..+. +|+ +++|.+
T Consensus 156 ~~~i~~~~-----n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~~-p~~L~~l~~~l~~~p~----~d~v~G 216 (387)
T 3f1y_A 156 ELMSGYGD-----AHGKGDAMWRALSV----TRGDLVLYIDADTRDFR-PQLAYGVLGPVLEVPG----VRFVKA 216 (387)
T ss_dssp GTTGGGCS-----CCSHHHHHHHHTTT----CCSSEEEECCTTCSSCC-THHHHTTHHHHHHSTT----CCEEEE
T ss_pred eeEecCCc-----cCCHHHHHHHHHHh----cCCCEEEEEcCCCCcCC-HHHHHHHHHHHHHCCC----ceEEEE
Confidence 01112222 46899999999998 89999999999998 54 999999998874 455 566654
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.38 E-value=8.2e-13 Score=139.89 Aligned_cols=62 Identities=11% Similarity=-0.040 Sum_probs=45.9
Q ss_pred cccccCCCc---cchHHHHHHHHHCCcEEEEeCCCCCee----------EeccCcCHHHHHHhhHHHhcccchhh
Q 004692 438 EVGFSYQSV---SEDFFTGFILHCKGWTSTYLDPSRPQF----------LGTSTTNLNDVLIQGTRWASGLIDVS 499 (736)
Q Consensus 438 ~~G~~~~si---tED~~t~~rl~~~Gwrs~y~~~~~~~~----------~g~aP~tl~~~l~Qr~RWa~G~~qi~ 499 (736)
.+||+.... .||.+...|++.+||++.+.++...-. ....|+.+....+||.||+++.+..+
T Consensus 189 vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 189 INGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp TTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred cCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 467877644 599999999999999887443211111 23578999999999999999999876
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.14 E-value=1.8e-10 Score=118.88 Aligned_cols=47 Identities=11% Similarity=-0.032 Sum_probs=40.1
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC-----CCCCCceEEEc
Q 004692 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-----PKTSSSLAFVQ 322 (736)
Q Consensus 267 KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D-----~~~~~~vg~VQ 322 (736)
.|+|+|.|++. ++|||++++|+|.++ +|++|.+++.++.+ |+ +|.|.
T Consensus 62 ~a~a~N~Gi~~----A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~~----vg~vg 113 (249)
T 2nxv_A 62 GFSWHKQMLPR----CKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADPK----WLVAG 113 (249)
T ss_dssp TTTHHHHHGGG----CCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCTT----EEEEE
T ss_pred HHHHHHHHHHh----cCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCCC----eeEEe
Confidence 46789999998 899999999999997 59999999988863 55 77763
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.75 E-value=1.7e-07 Score=103.30 Aligned_cols=42 Identities=21% Similarity=0.092 Sum_probs=36.2
Q ss_pred CCChHHHHHHHH----HhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhhc
Q 004692 264 HHFKGGALNVLL----RVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL 310 (736)
Q Consensus 264 ~~~KAGaLN~al----~~s~~~s~g~~Il~~DAD~~-~~~p~~L~~~v~~f~ 310 (736)
+.||++|+|.|+ +. ++||+|+++|||.. .+ |+.+.+++....
T Consensus 73 n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~~-P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEE----TQWERIHFYDADITSFG-PDWITKAEEAAD 119 (397)
T ss_dssp SSSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCC-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCC-HHHHHHHHHHHH
Confidence 468999999999 77 89999999999985 34 999999887664
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.07 E-value=1.3e-05 Score=87.76 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=31.9
Q ss_pred CCChHHHHHHHHHhcCCCC---CCCEEEEeCCCCCCCchHHHHHHHH
Q 004692 264 HHFKGGALNVLLRVSGVIS---NSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 264 ~~~KAGaLN~al~~s~~~s---~g~~Il~~DAD~~~~~p~~L~~~v~ 307 (736)
+.||..||-.++.. + +||+|+++|||-+ .|..+.+.+.
T Consensus 142 r~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~--iP~~v~~~~k 182 (394)
T 2zu9_A 142 RSGKGEGMLVGLLL----AKAIGAEYVGFVDADNY--IPGAVNEYVK 182 (394)
T ss_dssp CCSHHHHHHHHHHH----HHHTTCSEEEECCSCBS--CHHHHHHHHH
T ss_pred cCChHHHHHHHHHH----HhhCCCCEEEEEeCCCC--CHHHHHHHHH
Confidence 34999999999998 6 8999999999995 3788866554
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=98.05 E-value=1.1e-05 Score=86.28 Aligned_cols=44 Identities=7% Similarity=-0.016 Sum_probs=37.4
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccch
Q 004692 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITL 145 (736)
Q Consensus 93 ~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~ 145 (736)
....++|+||+ |||+. +++.+++++.|.. .+|+|+|||+.|.|.
T Consensus 51 i~~klSIVVPv---YNEe~----~lLesVl~qi~~d--~eIIlVdDGS~D~s~ 94 (391)
T 2wvl_A 51 VLEQTAIVVPT---RNERL----KLLEGVLSGIPHE--ALILVASNSSPDRFQ 94 (391)
T ss_dssp HHTTEEEEEEE---SSCCH----HHHHHHHHTSCTT--SEEEEEECCCHHHHH
T ss_pred HHhceEEEEec---cCcHH----HHHHHHHhcCCCC--ceEEEEECCCCCChH
Confidence 45789999999 99984 4799999998774 899999999988663
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.65 E-value=7.2e-05 Score=80.80 Aligned_cols=45 Identities=13% Similarity=0.188 Sum_probs=39.5
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004692 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (736)
Q Consensus 94 ~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~ 143 (736)
++.+.|+|+| ||=| + +++|+.|+++++.+.++..|+|+|||+.+.
T Consensus 1 ~~~~pViI~~---yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~ 45 (343)
T 1fo8_A 1 LAVIPILVIA---CDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEE 45 (343)
T ss_dssp CCCCCEEEEE---SSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHH
T ss_pred CCcccEEEEE---CCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHH
Confidence 3568899999 9998 7 999999999999777778899999999763
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=83.68 E-value=7.5 Score=40.38 Aligned_cols=53 Identities=15% Similarity=-0.040 Sum_probs=36.9
Q ss_pred cchHHHHHHHHHCCcEEEEeCCC---C-CeeEe---------ccCcCHHHHHHhhHHHhcccchhh
Q 004692 447 SEDFFTGFILHCKGWTSTYLDPS---R-PQFLG---------TSTTNLNDVLIQGTRWASGLIDVS 499 (736)
Q Consensus 447 tED~~t~~rl~~~Gwrs~y~~~~---~-~~~~g---------~aP~tl~~~l~Qr~RWa~G~~qi~ 499 (736)
.||.+...|+..+|.++.-.... + .++.- ..|......-.+++||..+.+..+
T Consensus 185 gEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 185 LEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp SHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred ccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeee
Confidence 79999999999999887643310 0 11221 234556677889999999888876
No 20
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=37.29 E-value=73 Score=31.51 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004692 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 267 KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D 311 (736)
....+-+|++......+.++|++.|||+=+-+++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 356677788763210125899999999855568999999887764
No 21
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=23.39 E-value=1.5e+02 Score=27.87 Aligned_cols=41 Identities=15% Similarity=-0.017 Sum_probs=31.4
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004692 266 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 266 ~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f 309 (736)
+-++++..|++.. .+.+.+++++||+-.-+++.+++++..+
T Consensus 72 G~~~si~~al~~~---~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRFF---KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHHT---TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhh---ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 5688888999872 2348999999999323488998888766
No 22
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=20.16 E-value=1.1e+02 Score=29.32 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=31.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHhhcC
Q 004692 265 HFKGGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (736)
Q Consensus 265 ~~KAGaLN~al~~s~~~s~g~~Il~~DAD~-~~~~p~~L~~~v~~f~D 311 (736)
.+.+++++ +++. .+.|.+++++||+ .++ ++.+++++..+.+
T Consensus 72 ~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~~-~~~i~~l~~~~~~ 113 (234)
T 2y6p_A 72 SGSDRVLY-VVRD----LDVDLIINYQGDEPFVY-EEDIKLIFRELEK 113 (234)
T ss_dssp SHHHHHHH-HHTT----CCCSEEEECCTTCCCCC-HHHHHHHHHHHHH
T ss_pred cchHHHHH-HHHh----CCCCEEEEecCCcCcCC-HHHHHHHHHHHHh
Confidence 46777774 5655 4678999999999 654 8889998887753
Done!