Query 004695
Match_columns 736
No_of_seqs 323 out of 1984
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 11:21:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004695.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004695hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02638 cellulose synthase A 100.0 3E-175 6E-180 1518.8 54.4 716 3-735 253-1061(1079)
2 PLN02436 cellulose synthase A 100.0 8E-175 2E-179 1509.2 57.4 716 2-735 267-1076(1094)
3 PLN02400 cellulose synthase 100.0 3E-175 7E-180 1518.8 53.4 718 1-735 257-1066(1085)
4 PLN02195 cellulose synthase A 100.0 2E-174 5E-179 1500.7 55.3 714 4-735 157-957 (977)
5 PLN02189 cellulose synthase 100.0 2E-174 5E-179 1507.5 54.8 715 3-735 235-1022(1040)
6 PLN02915 cellulose synthase A 100.0 2E-172 3E-177 1492.5 56.1 716 4-735 192-1026(1044)
7 PLN02190 cellulose synthase-li 100.0 1E-172 3E-177 1460.4 54.2 704 1-731 5-755 (756)
8 PLN02248 cellulose synthase-li 100.0 2E-172 5E-177 1492.3 54.0 719 4-734 267-1119(1135)
9 PLN02893 Cellulose synthase-li 100.0 4E-171 8E-176 1457.0 59.7 702 2-735 9-733 (734)
10 PF03552 Cellulose_synt: Cellu 100.0 7E-161 1E-165 1362.1 38.8 627 97-735 1-708 (720)
11 TIGR03030 CelA cellulose synth 100.0 1.1E-72 2.4E-77 667.6 54.7 508 20-714 56-574 (713)
12 PRK11498 bcsA cellulose syntha 100.0 5.9E-73 1.3E-77 667.6 52.0 488 21-713 187-686 (852)
13 PRK05454 glucosyltransferase M 100.0 6.2E-39 1.3E-43 374.7 51.9 361 19-546 40-421 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 2E-35 4.4E-40 333.4 40.7 230 91-501 71-306 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 5.4E-37 1.2E-41 321.6 23.3 241 97-497 1-253 (254)
16 COG1215 Glycosyltransferases, 100.0 1.8E-35 3.9E-40 331.1 31.1 233 94-501 53-290 (439)
17 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 4.3E-34 9.4E-39 322.1 37.5 282 91-553 45-341 (439)
18 PRK11204 N-glycosyltransferase 100.0 1.9E-33 4.1E-38 314.6 40.6 230 91-501 50-285 (420)
19 PRK14716 bacteriophage N4 adso 100.0 5.6E-31 1.2E-35 298.6 39.0 262 91-524 62-353 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 1.7E-30 3.6E-35 266.8 22.2 227 95-495 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 3.1E-30 6.7E-35 263.1 22.2 230 95-499 1-234 (234)
22 PRK11234 nfrB bacteriophage N4 100.0 2.6E-28 5.7E-33 287.0 36.6 237 91-500 59-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 2.1E-29 4.5E-34 260.8 20.6 232 95-501 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 2.4E-28 5.1E-33 250.8 21.5 230 98-501 1-234 (236)
25 TIGR03472 HpnI hopanoid biosyn 100.0 2.5E-26 5.5E-31 253.9 29.6 227 92-496 38-273 (373)
26 PF13641 Glyco_tranf_2_3: Glyc 100.0 6.1E-29 1.3E-33 253.5 6.3 224 95-494 1-228 (228)
27 cd04190 Chitin_synth_C C-termi 99.9 8.4E-27 1.8E-31 242.7 14.4 171 270-497 64-243 (244)
28 PRK15489 nfrB bacteriophage N4 99.9 7.5E-24 1.6E-28 246.8 35.8 236 91-499 67-341 (703)
29 cd02520 Glucosylceramide_synth 99.9 2.1E-25 4.6E-30 223.7 16.9 193 95-494 1-195 (196)
30 cd04192 GT_2_like_e Subfamily 99.9 1.6E-24 3.5E-29 219.7 20.7 221 99-494 1-229 (229)
31 cd06439 CESA_like_1 CESA_like_ 99.9 2.5E-24 5.5E-29 222.9 20.2 226 90-498 24-251 (251)
32 cd06434 GT2_HAS Hyaluronan syn 99.9 6.5E-24 1.4E-28 217.2 20.0 229 96-497 1-234 (235)
33 TIGR03469 HonB hopene-associat 99.9 6.2E-22 1.3E-26 219.8 33.3 230 91-493 36-280 (384)
34 COG2943 MdoH Membrane glycosyl 99.9 2.5E-19 5.5E-24 195.3 44.8 344 18-528 62-423 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 1E-20 2.2E-25 194.3 19.0 225 96-501 1-233 (249)
36 cd06438 EpsO_like EpsO protein 99.8 9.9E-20 2.2E-24 180.5 12.8 162 99-372 1-168 (183)
37 cd06436 GlcNAc-1-P_transferase 99.8 4.2E-19 9.1E-24 177.8 15.4 165 99-372 1-176 (191)
38 PF13632 Glyco_trans_2_3: Glyc 99.8 5.7E-18 1.2E-22 169.0 12.7 137 286-495 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 3.3E-17 7.2E-22 163.5 16.2 193 95-468 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 1E-16 2.3E-21 160.0 15.1 190 98-468 1-195 (201)
41 cd06433 GT_2_WfgS_like WfgS an 99.7 9.1E-16 2E-20 151.5 15.3 186 98-468 1-188 (202)
42 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.1E-15 2.4E-20 163.7 14.5 110 98-311 1-110 (299)
43 PLN02726 dolichyl-phosphate be 99.6 1.1E-14 2.4E-19 151.2 20.8 123 93-324 7-129 (243)
44 cd04196 GT_2_like_d Subfamily 99.6 4.4E-15 9.5E-20 148.9 15.4 162 98-372 1-165 (214)
45 cd02522 GT_2_like_a GT_2_like_ 99.6 7.9E-15 1.7E-19 148.4 15.8 178 97-465 1-178 (221)
46 cd04186 GT_2_like_c Subfamily 99.6 9.8E-15 2.1E-19 139.8 15.0 157 99-468 1-159 (166)
47 cd06420 GT2_Chondriotin_Pol_N 99.6 1.7E-14 3.8E-19 141.5 17.1 104 99-309 1-104 (182)
48 cd06913 beta3GnTL1_like Beta 1 99.6 3.5E-14 7.6E-19 144.5 19.5 111 99-311 1-111 (219)
49 cd06442 DPM1_like DPM1_like re 99.6 3.3E-14 7.2E-19 144.2 18.4 106 99-312 1-106 (224)
50 PRK10073 putative glycosyl tra 99.6 1.9E-14 4.2E-19 156.8 14.7 109 94-312 5-113 (328)
51 PF13506 Glyco_transf_21: Glyc 99.6 4.4E-14 9.5E-19 140.5 13.8 153 264-493 15-175 (175)
52 cd04185 GT_2_like_b Subfamily 99.5 1.2E-13 2.6E-18 138.3 16.2 118 99-328 1-118 (202)
53 PF03142 Chitin_synth_2: Chiti 99.5 4.9E-12 1.1E-16 143.8 30.5 168 283-500 201-379 (527)
54 cd06423 CESA_like CESA_like is 99.5 3E-14 6.5E-19 135.7 9.8 118 99-328 1-119 (180)
55 cd04188 DPG_synthase DPG_synth 99.5 4E-13 8.7E-18 135.9 17.0 107 99-312 1-110 (211)
56 cd02526 GT2_RfbF_like RfbF is 99.5 6E-14 1.3E-18 143.7 10.7 146 250-475 48-203 (237)
57 PRK10018 putative glycosyl tra 99.5 6.1E-13 1.3E-17 141.8 17.3 109 93-310 3-111 (279)
58 PRK10063 putative glycosyl tra 99.5 1.4E-12 3E-17 136.8 17.1 48 95-146 1-49 (248)
59 PF00535 Glycos_transf_2: Glyc 99.4 7.1E-14 1.5E-18 133.0 5.1 164 98-372 1-166 (169)
60 cd04179 DPM_DPG-synthase_like 99.4 2.4E-12 5.2E-17 126.4 13.2 120 99-329 1-120 (185)
61 PTZ00260 dolichyl-phosphate be 99.4 8.3E-11 1.8E-15 128.6 25.5 128 92-323 67-200 (333)
62 TIGR01556 rhamnosyltran L-rham 99.3 2.3E-11 4.9E-16 129.0 13.7 145 249-468 45-195 (281)
63 PRK13915 putative glucosyl-3-p 99.3 1E-10 2.2E-15 126.4 16.4 123 92-323 28-152 (306)
64 cd04187 DPM1_like_bac Bacteria 99.3 8.5E-11 1.8E-15 115.8 14.3 105 250-373 56-161 (181)
65 PRK10714 undecaprenyl phosphat 99.2 1.6E-09 3.5E-14 118.1 22.7 110 94-310 5-116 (325)
66 cd00761 Glyco_tranf_GTA_type G 99.2 3.2E-10 7E-15 105.2 14.4 113 99-324 1-114 (156)
67 PF10111 Glyco_tranf_2_2: Glyc 99.2 7.4E-10 1.6E-14 118.2 16.9 134 265-468 74-216 (281)
68 KOG2571 Chitin synthase/hyalur 99.2 3.5E-10 7.6E-15 133.0 15.4 166 265-494 424-596 (862)
69 COG1216 Predicted glycosyltran 99.1 2.1E-09 4.5E-14 116.0 17.5 121 94-326 2-123 (305)
70 COG0463 WcaA Glycosyltransfera 98.9 1.9E-08 4.2E-13 96.0 11.9 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 98.8 2.5E-08 5.5E-13 102.8 12.2 44 264-312 56-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.4 7.4E-07 1.6E-11 95.6 9.4 227 92-494 82-315 (431)
73 KOG2978 Dolichol-phosphate man 98.2 1.8E-05 4E-10 77.9 11.5 105 249-372 63-174 (238)
74 KOG2977 Glycosyltransferase [G 98.1 2.5E-05 5.4E-10 81.6 10.7 108 96-307 68-183 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.8 0.00023 5E-09 77.8 13.2 43 97-143 2-44 (334)
76 PF02364 Glucan_synthase: 1,3- 96.7 0.042 9E-07 65.9 16.2 192 256-522 263-482 (817)
77 KOG3737 Predicted polypeptide 96.3 0.013 2.7E-07 63.9 8.4 49 91-142 151-199 (603)
78 KOG3738 Predicted polypeptide 95.8 0.02 4.3E-07 62.7 7.0 49 92-143 121-169 (559)
79 KOG3736 Polypeptide N-acetylga 95.5 0.012 2.7E-07 68.3 4.4 112 92-309 139-251 (578)
80 PF13704 Glyco_tranf_2_4: Glyc 94.9 0.075 1.6E-06 47.0 6.7 35 107-146 1-35 (97)
81 PF13712 Glyco_tranf_2_5: Glyc 93.1 0.26 5.6E-06 50.9 7.3 49 265-321 40-89 (217)
82 cd00899 b4GalT Beta-4-Galactos 92.1 1.6 3.4E-05 45.3 11.3 53 447-499 138-200 (219)
83 KOG0916 1,3-beta-glucan syntha 90.9 4.7 0.0001 51.0 15.3 85 444-534 1172-1258(1679)
84 PRK14503 mannosyl-3-phosphogly 85.1 9.3 0.0002 42.2 11.6 43 264-309 142-184 (393)
85 PF03071 GNT-I: GNT-I family; 84.6 3.3 7.1E-05 47.1 8.2 48 92-144 90-138 (434)
86 PF03452 Anp1: Anp1; InterPro 84.2 6.7 0.00015 41.9 9.9 53 92-148 22-76 (269)
87 COG4092 Predicted glycosyltran 84.0 13 0.00029 39.4 11.6 80 248-330 61-141 (346)
88 TIGR02460 osmo_MPGsynth mannos 83.5 9.8 0.00021 41.8 10.8 43 264-309 141-183 (381)
89 PF09488 Osmo_MPGsynth: Mannos 81.3 20 0.00044 39.6 12.3 41 264-307 141-181 (381)
90 PRK14502 bifunctional mannosyl 77.5 19 0.00042 43.3 11.6 43 264-309 146-188 (694)
91 PF01644 Chitin_synth_1: Chiti 67.5 46 0.001 33.0 9.8 52 251-308 111-162 (163)
92 PF13896 Glyco_transf_49: Glyc 58.7 12 0.00027 40.9 4.6 46 271-321 119-164 (317)
93 PF05679 CHGN: Chondroitin N-a 50.0 1.9E+02 0.0041 33.9 12.7 49 250-306 315-363 (499)
94 PRK09382 ispDF bifunctional 2- 49.8 40 0.00087 37.9 6.9 40 267-310 83-122 (378)
95 TIGR03584 PseF pseudaminic aci 47.0 1.7E+02 0.0036 30.2 10.5 60 264-323 75-134 (222)
96 PF02709 Glyco_transf_7C: N-te 44.3 17 0.00037 31.4 2.2 30 439-468 35-67 (78)
97 PF11316 Rhamno_transf: Putati 39.4 3E+02 0.0065 28.9 11.0 43 266-310 96-140 (234)
98 COG4097 Predicted ferric reduc 35.4 1.3E+02 0.0029 33.7 7.7 67 93-178 342-408 (438)
99 PF02434 Fringe: Fringe-like; 29.7 1.5E+02 0.0033 31.2 7.1 29 282-312 85-113 (252)
100 cd04182 GT_2_like_f GT_2_like_ 28.9 1.5E+02 0.0033 28.5 6.5 44 264-310 73-117 (186)
101 cd02540 GT2_GlmU_N_bac N-termi 28.8 2E+02 0.0043 29.0 7.6 45 264-311 72-117 (229)
102 KOG4179 Lysyl hydrolase/glycos 27.6 2.2E+02 0.0047 32.4 7.7 36 267-307 98-133 (568)
103 PF04724 Glyco_transf_17: Glyc 26.3 1.2E+02 0.0026 33.9 5.8 35 269-305 165-199 (356)
104 TIGR02665 molyb_mobA molybdopt 26.3 1.3E+02 0.0028 29.4 5.5 42 264-310 72-114 (186)
105 PF06638 Strabismus: Strabismu 25.4 3.1E+02 0.0067 32.0 8.8 41 693-733 141-181 (505)
106 cd02503 MobA MobA catalyzes th 24.9 2.5E+02 0.0054 27.2 7.3 42 264-309 68-109 (181)
107 PRK02726 molybdopterin-guanine 20.6 3.5E+02 0.0075 27.2 7.4 42 265-310 78-119 (200)
108 TIGR03310 matur_ygfJ molybdenu 20.3 2.5E+02 0.0055 27.2 6.3 43 265-310 74-116 (188)
109 COG3548 Predicted integral mem 20.1 9.6E+02 0.021 24.6 12.6 69 652-724 49-125 (197)
No 1
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=2.9e-175 Score=1518.80 Aligned_cols=716 Identities=33% Similarity=0.641 Sum_probs=662.1
Q ss_pred CCCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 004695 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
+.+|||++++.+++. .+||+++++++++++++|.||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 378899999988873 67999999999999999999999843 4578999999999999999999999999999999
Q ss_pred CCCCCCCCC-------CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHh
Q 004695 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (736)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~f 154 (736)
.+++++|.+ ++++|.||||||||||++|||.+++|||+|+|+.|||.||+.|||+|||++.+|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999988864 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004695 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (736)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~-------~~~---------~ 217 (736)
||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+.+ +|+ +
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 9999999999999999999999998 5566777889999999999999999999998752 222 4
Q ss_pred CCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004695 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (736)
Q Consensus 218 ~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~ 297 (736)
.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+||+|||||||+++||||++|
T Consensus 489 ~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN 564 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN 564 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence 57899999999999998753 45677899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-ccc
Q 004695 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFT 376 (736)
Q Consensus 298 ~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~-~~~ 376 (736)
||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+|||| +|+
T Consensus 565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~ 644 (1079)
T PLN02638 565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 644 (1079)
T ss_pred chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 554
Q ss_pred ccc-------------c--------------------------------------------ch-------hhhhhhcCCc
Q 004695 377 HTV-------------N--------------------------------------------DI-------SELKDTFGKS 392 (736)
Q Consensus 377 ~~~-------------~--------------------------------------------~~-------~~~~~~~g~~ 392 (736)
... + +. ..++++||+|
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S 724 (1079)
T PLN02638 645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 724 (1079)
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence 310 0 00 0345789999
Q ss_pred hhhhhhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCe
Q 004695 393 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ 472 (736)
Q Consensus 393 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~ 472 (736)
.+|++|+..+.++.. ....++++++||++|+||.||.+|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus 725 ~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 802 (1079)
T PLN02638 725 AVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA 802 (1079)
T ss_pred HHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence 999999988875433 334567899999999999999999999999999999999999999999999999999877789
Q ss_pred eEeecCCChHHHhhhhhhhccccccccccccCCcccC-CCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCc
Q 004695 473 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGIS 551 (736)
Q Consensus 473 ~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~ 551 (736)
+.|++|+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| ++++|.++|+++|++||++|++
T Consensus 803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~ 881 (1079)
T PLN02638 803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF 881 (1079)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999976 3789999999999999999 9999999999999999999999
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcc
Q 004695 552 LYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD 631 (736)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~ 631 (736)
++|+++.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+||+++++|.||+|..+
T Consensus 882 i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d 961 (1079)
T PLN02638 882 IIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASD 961 (1079)
T ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccc
Confidence 99999999989999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 004695 632 KEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDK 709 (736)
Q Consensus 632 ~~~~~~~~~~~f~f~~~s~l~~p~~~l~~l~l~a~~~g~~r~~~~~--~~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k 709 (736)
+++. .+++|+|+ |+++++|.++++++|++|+++|+++++..+ .|+.+++++++|+|+++|+|||++||++||
T Consensus 962 ~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~-- 1035 (1079)
T PLN02638 962 EDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ-- 1035 (1079)
T ss_pred cccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence 5432 26899999 999999999999999999999999998755 688999999999999999999999999997
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhc
Q 004695 710 GRISPSAILLSSVFFMIFLFFGSIIL 735 (736)
Q Consensus 710 ~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
+|+|+++++||++|+++|++++--|+
T Consensus 1036 ~r~P~~v~v~s~ll~~~~~l~~v~~~ 1061 (1079)
T PLN02638 1036 NRTPTIVVVWSILLASIFSLLWVRID 1061 (1079)
T ss_pred CCCCeeehHHHHHHHHHHHHHHheec
Confidence 78899999999999999999886553
No 2
>PLN02436 cellulose synthase A
Probab=100.00 E-value=8.1e-175 Score=1509.23 Aligned_cols=716 Identities=33% Similarity=0.633 Sum_probs=659.5
Q ss_pred CC-CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 004695 2 DS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPV 79 (736)
Q Consensus 2 ~~-~~~l~~~~~~~~~~-~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~ 79 (736)
|+ .+|||++++.+++. ++||+++++++++++++|.||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 267 ~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~----~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv 342 (1094)
T PLN02436 267 DEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPV----NDAYGLWLTSVICEIWFAVSWILDQFPKWYPI 342 (1094)
T ss_pred cccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----cccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 44 77899999988874 46999999999999999999998843 34689999999999999999999999999999
Q ss_pred ccCCCCCCCCC-------CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHH
Q 004695 80 SRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREAC 152 (736)
Q Consensus 80 ~r~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~ 152 (736)
+|.+++++|.+ ++++|.|||||+||||++|||.+++|||+|+|+.|||.||+.|||+|||++.+|+++|.||+
T Consensus 343 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 422 (1094)
T PLN02436 343 ERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETS 422 (1094)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999998853 25699999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC--------------
Q 004695 153 RFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-GE-------------- 216 (736)
Q Consensus 153 ~fa~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~-~~-------------- 216 (736)
+|||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+.+. ++
T Consensus 423 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W 502 (1094)
T PLN02436 423 EFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPW 502 (1094)
T ss_pred HHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccC
Confidence 999999999999999999999999998 55667778899999999999999999999988642 11
Q ss_pred -CCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 004695 217 -YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 295 (736)
Q Consensus 217 -~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~ 295 (736)
+.+++|||+||||+++++++. |.++.++|+|+||+|||||+++||+||||||+++|+||+|||+|||+++||||+
T Consensus 503 ~g~~~~dHp~IIqVll~~~~~~----d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmY 578 (1094)
T PLN02436 503 PGNNVRDHPGMIQVFLGHSGVR----DVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHY 578 (1094)
T ss_pred CCCCCCCCccceEEEecCCCCc----ccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccc
Confidence 457899999999999997642 557788999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-c
Q 004695 296 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-D 374 (736)
Q Consensus 296 ~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~-~ 374 (736)
.|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| +
T Consensus 579 iNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~ 658 (1094)
T PLN02436 579 INNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658 (1094)
T ss_pred cCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred cccccc----------------------------------------------------------------chhhhhhhcC
Q 004695 375 FTHTVN----------------------------------------------------------------DISELKDTFG 390 (736)
Q Consensus 375 ~~~~~~----------------------------------------------------------------~~~~~~~~~g 390 (736)
|+.... ..+.++++||
T Consensus 659 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG 738 (1094)
T PLN02436 659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFG 738 (1094)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhc
Confidence 541100 0112457899
Q ss_pred CchhhhhhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCC
Q 004695 391 KSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFR 470 (736)
Q Consensus 391 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~ 470 (736)
+|.+|++|+..+.++ .+....+++++++|++|+||.||.+|+||+++||.|+|+|||+.||++||++||||+||+|++
T Consensus 739 ~S~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r 816 (1094)
T PLN02436 739 QSPVFVASTLLENGG--VPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR 816 (1094)
T ss_pred ccHHHHHHHHHhhcC--CCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCc
Confidence 999999999998743 333445678999999999999999999999999999999999999999999999999998777
Q ss_pred CeeEeecCCChHHHhhhhhhhccccccccccccCCcccC-CCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcC
Q 004695 471 PQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNG 549 (736)
Q Consensus 471 ~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g 549 (736)
+++.|++|+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| ++++|.++|+++|++||++|
T Consensus 817 ~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G 895 (1094)
T PLN02436 817 PAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTG 895 (1094)
T ss_pred hhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999976 3689999999999999999 99999999999999999999
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCC
Q 004695 550 ISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKV 629 (736)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~ 629 (736)
++++|.++.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+||+++++|.||+|.
T Consensus 896 ~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~ 975 (1094)
T PLN02436 896 KFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKA 975 (1094)
T ss_pred CeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 004695 630 LDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRK 707 (736)
Q Consensus 630 ~~~~~~~~~~~~~f~f~~~s~l~~p~~~l~~l~l~a~~~g~~r~~~~~--~~~~~~~~~~~~~w~~~~l~p~l~al~~rk 707 (736)
.+++. .+++|+|+ |+++++|+++++++|++|+++|+++++..+ .|+.+++++++|+|+++|+|||++||++|
T Consensus 976 ~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr- 1049 (1094)
T PLN02436 976 ADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK- 1049 (1094)
T ss_pred ccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 76432 13688999 999999999999999999999999998755 68899999999999999999999999954
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004695 708 DKGRISPSAILLSSVFFMIFLFFGSIIL 735 (736)
Q Consensus 708 ~k~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
++|+|+++++||++|+++|++++--|+
T Consensus 1050 -~~r~P~~v~v~s~lla~~~~l~~v~~~ 1076 (1094)
T PLN02436 1050 -QDRMPTIILVWSILLASILTLLWVRVN 1076 (1094)
T ss_pred -CCCCCeeehHHHHHHHHHHHHHHeeec
Confidence 559999999999999999999986553
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=3.4e-175 Score=1518.79 Aligned_cols=718 Identities=34% Similarity=0.636 Sum_probs=661.7
Q ss_pred CCC-CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 004695 1 MDS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRP 78 (736)
Q Consensus 1 ~~~-~~~l~~~~~~~~~~-~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p 78 (736)
||. .+|||++++.++++ .+||+++++++++++++|.||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|
T Consensus 257 ~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~P 332 (1085)
T PLN02400 257 ADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPV----KDAYGLWLTSVICEIWFALSWLLDQFPKWYP 332 (1085)
T ss_pred cccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----cccHHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 344 68899999988873 67999999999999999999998843 3478999999999999999999999999999
Q ss_pred cccCCCCCCCCC-------CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHH
Q 004695 79 VSRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREA 151 (736)
Q Consensus 79 ~~r~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea 151 (736)
++|.+++++|++ ++++|.||||||||||++|||.+++|||+|+|+.|||.||+.|||+|||++.+|+++|.||
T Consensus 333 v~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Ea 412 (1085)
T PLN02400 333 INRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSET 412 (1085)
T ss_pred ccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHH
Confidence 999999998863 2469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhh-------hcCC-------
Q 004695 152 CRFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-------EDGE------- 216 (736)
Q Consensus 152 ~~fa~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~-------~~~~------- 216 (736)
++|||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||++. ++|+
T Consensus 413 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~ 492 (1085)
T PLN02400 413 AEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTP 492 (1085)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCcc
Confidence 9999999999999999999999999998 555577789999999999999999999999875 2332
Q ss_pred --CCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 004695 217 --YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 294 (736)
Q Consensus 217 --~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~ 294 (736)
+.+++|||+||||+++++++. |.++.++|+||||+|||||+++||+||||||+++|+||+|||+|||+++||||
T Consensus 493 W~g~~~~dHp~iIqVll~~~~~~----d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDm 568 (1085)
T PLN02400 493 WPGNNPRDHPGMIQVFLGHSGGL----DTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDH 568 (1085)
T ss_pred CCCCCCCCCchhhhhhhcCCCCc----ccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEeccccc
Confidence 458899999999999998752 45677899999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-
Q 004695 295 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA- 373 (736)
Q Consensus 295 ~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~- 373 (736)
++|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+||||
T Consensus 569 Y~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~ 648 (1085)
T PLN02400 569 YFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGY 648 (1085)
T ss_pred ccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-----c-------------c--------------------------------------------chhhhhhhcCC
Q 004695 374 DFTHT-----V-------------N--------------------------------------------DISELKDTFGK 391 (736)
Q Consensus 374 ~~~~~-----~-------------~--------------------------------------------~~~~~~~~~g~ 391 (736)
+|+.. . + ..++++++||+
T Consensus 649 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~ 728 (1085)
T PLN02400 649 DPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQ 728 (1085)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccc
Confidence 55310 0 0 01234568999
Q ss_pred chhhhhhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCC
Q 004695 392 SNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRP 471 (736)
Q Consensus 392 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~ 471 (736)
|.+||+|+..+.++ .+....+++++++|++|+||.||.+|+||+++||.|+|+|||+.||++||++||||+||+|+++
T Consensus 729 S~~fi~S~~~~~~~--~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~ 806 (1085)
T PLN02400 729 SPVFIAATFMEQGG--IPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRP 806 (1085)
T ss_pred cHHHHHHHHHHhcC--CCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcH
Confidence 99999999955422 3344566789999999999999999999999999999999999999999999999999998789
Q ss_pred eeEeecCCChHHHhhhhhhhccccccccccccCCcccC-CCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCC
Q 004695 472 QFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGI 550 (736)
Q Consensus 472 ~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~ 550 (736)
++.|++|+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| ++++|.++|+++|++||++|+
T Consensus 807 af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG~ 885 (1085)
T PLN02400 807 AFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITNK 885 (1085)
T ss_pred hhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999976 4789999999999999999 999999999999999999999
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCc
Q 004695 551 SLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVL 630 (736)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~ 630 (736)
+++|.++.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+||+++++|.||+|..
T Consensus 886 ~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~ 965 (1085)
T PLN02400 886 FIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 965 (1085)
T ss_pred ccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred chhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 004695 631 DKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKD 708 (736)
Q Consensus 631 ~~~~~~~~~~~~f~f~~~s~l~~p~~~l~~l~l~a~~~g~~r~~~~~--~~~~~~~~~~~~~w~~~~l~p~l~al~~rk~ 708 (736)
+++.. .+++|+|+ |+++++|+++++++|++|+++|+++++..+ .|+.+++++++|+|+++|+|||++||++|+
T Consensus 966 d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~- 1040 (1085)
T PLN02400 966 DEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ- 1040 (1085)
T ss_pred ccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 64331 25899999 999999999999999999999999998755 688999999999999999999999999887
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004695 709 KGRISPSAILLSSVFFMIFLFFGSIIL 735 (736)
Q Consensus 709 k~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
+|+|++|++||++|+++|++++--|+
T Consensus 1041 -~r~P~~v~~~s~lla~~~~l~~v~~~ 1066 (1085)
T PLN02400 1041 -NRTPTIVIVWSILLASIFSLLWVRID 1066 (1085)
T ss_pred -CCCceeHHHHHHHHHHHHHHHheecc
Confidence 89999999999999999999886553
No 4
>PLN02195 cellulose synthase A
Probab=100.00 E-value=2.4e-174 Score=1500.74 Aligned_cols=714 Identities=35% Similarity=0.639 Sum_probs=658.2
Q ss_pred CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 004695 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (736)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (736)
.+|||++++.+++. ++||+++++++++++++|.||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 157 ~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 232 (977)
T PLN02195 157 YEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPV----DSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRE 232 (977)
T ss_pred cCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcc----ccchHHHHHHHHHHHHHHHHHHHhcccccccccce
Confidence 68899999988874 46999999999999999999998843 34569999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhh
Q 004695 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (736)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa 155 (736)
+++++|.+ ++++|.|||||+||||++|||.++.|||+|+|+.|||.||+.|||+|||++.+|+++|.||++||
T Consensus 233 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 312 (977)
T PLN02195 233 TYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFA 312 (977)
T ss_pred ECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99988853 25699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------CC
Q 004695 156 KWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-GE---------------YG 218 (736)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~-~~---------------~~ 218 (736)
|+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||++.++ ++ +.
T Consensus 313 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~ 392 (977)
T PLN02195 313 RKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGN 392 (977)
T ss_pred HhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCC
Confidence 999999999999999999999998 44557778999999999999999999999988643 11 45
Q ss_pred CCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004695 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (736)
Q Consensus 219 ~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~ 298 (736)
+++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++||
T Consensus 393 ~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~ 468 (977)
T PLN02195 393 NTRDHPGMIQVFLGETGA----RDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNN 468 (977)
T ss_pred CCCCCcchhhhhccCCCC----cccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCc
Confidence 889999999999988764 2556778999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-cccc
Q 004695 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTH 377 (736)
Q Consensus 299 p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~-~~~~ 377 (736)
|++++++||||+||+.++++||||+||+|+|++++|+|++++++||+++++|+||+|||+||||||+|||+||+| +|+.
T Consensus 469 s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~ 548 (977)
T PLN02195 469 SKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPS 548 (977)
T ss_pred HHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999 6543
Q ss_pred c---------------------cc---------------c---------------------hhhhhhhcCCchhhhhhhh
Q 004695 378 T---------------------VN---------------D---------------------ISELKDTFGKSNVLINSLH 400 (736)
Q Consensus 378 ~---------------------~~---------------~---------------------~~~~~~~~g~~~~~~~s~~ 400 (736)
. +. + ..+++.+||+|.+|++|+.
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~ 628 (977)
T PLN02195 549 LPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTL 628 (977)
T ss_pred cccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHH
Confidence 1 00 0 0134568999999999998
Q ss_pred hhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCC
Q 004695 401 QSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTN 480 (736)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~t 480 (736)
.+..+... ...+.++++||++|+||.||.+|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|++|+|
T Consensus 629 ~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~ 706 (977)
T PLN02195 629 MENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPIN 706 (977)
T ss_pred HHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCC
Confidence 77654332 3356789999999999999999999999999999999999999999999999999998778999999999
Q ss_pred hHHHhhhhhhhccccccccccccCCcccCC--CCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCcccccccc
Q 004695 481 LNDLLIQGTRWGSGLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSS 558 (736)
Q Consensus 481 l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~--~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~ 558 (736)
+.+++.||+|||+|++|++++|+||+++|. ++|++.||++|+++++|+ ++++|.++|+++|++||++|++++|+++.
T Consensus 707 L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~vs~ 785 (977)
T PLN02195 707 LSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPTLSN 785 (977)
T ss_pred HHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecccchH
Confidence 999999999999999999999999999763 689999999999999999 99999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhh
Q 004695 559 PSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRY 638 (736)
Q Consensus 559 ~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~ 638 (736)
+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+||+++++|.||+|..++++
T Consensus 786 ~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~---- 861 (977)
T PLN02195 786 LASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTE---- 861 (977)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccc----
Confidence 8989999999999999999999999999999999999999999999999999999999999999999999876432
Q ss_pred cccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhH
Q 004695 639 EMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSA 716 (736)
Q Consensus 639 ~~~~f~f~~~s~l~~p~~~l~~l~l~a~~~g~~r~~~~~--~~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~~p~~~ 716 (736)
..++|+|+ ||++++|.++++++|++|+++|+++++.++ .|+.+++++++|+|+++|+|||++||++|+ +|+|+++
T Consensus 862 ~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v 938 (977)
T PLN02195 862 FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTPTIV 938 (977)
T ss_pred hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeee
Confidence 13788999 999999999999999999999999998755 688899999999999999999999999997 7889999
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 004695 717 ILLSSVFFMIFLFFGSIIL 735 (736)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~ 735 (736)
++||++|+++|++++--|+
T Consensus 939 ~v~s~ll~~~~~l~~v~~~ 957 (977)
T PLN02195 939 VLWSVLLASVFSLVWVKIN 957 (977)
T ss_pred hHHHHHHHHHHHHHHeecc
Confidence 9999999999999886553
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=2.3e-174 Score=1507.52 Aligned_cols=715 Identities=33% Similarity=0.641 Sum_probs=659.7
Q ss_pred CCCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 004695 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
+.+|||++++.+++. ++||+++++++++++++|.||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 235 ~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 235 ARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPV----HDAIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcC----ccchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 378899999988874 46999999999999999999998843 3458999999999999999999999999999999
Q ss_pred CCCCCCCCC-------CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHh
Q 004695 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (736)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~f 154 (736)
.+++++|.+ ++++|.||||||||||++|||.+++|||+|+|+.|||.||+.|||+|||++.+|+++|.||++|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998854 2349999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhh-h------cCC---------C
Q 004695 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-E------DGE---------Y 217 (736)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~-~------~~~---------~ 217 (736)
||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+. + +++ +
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g 470 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPG 470 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCC
Confidence 9999999999999999999999998 556677788999999999999999999999874 1 222 4
Q ss_pred CCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004695 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (736)
Q Consensus 218 ~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~ 297 (736)
.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+||+|||||||+|+||||++|
T Consensus 471 ~~~~dHp~IiQVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~N 546 (1040)
T PLN02189 471 NNTRDHPGMIQVFLGHSGGH----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYIN 546 (1040)
T ss_pred CCCCCCHHHHHHHhcCCCCc----cccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccC
Confidence 57899999999999997753 44677899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-ccc
Q 004695 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFT 376 (736)
Q Consensus 298 ~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~-~~~ 376 (736)
||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||+| +|+
T Consensus 547 ns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~ 626 (1040)
T PLN02189 547 NSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPP 626 (1040)
T ss_pred chHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 554
Q ss_pred cc-------------------cc------------------------chhhhhhhcCCchhhhhhhhhhhcccCCCCCCc
Q 004695 377 HT-------------------VN------------------------DISELKDTFGKSNVLINSLHQSYKQNNANGENF 413 (736)
Q Consensus 377 ~~-------------------~~------------------------~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
.. .. ...+++.+||+|.+|++|+..+..+ .+....
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~~ 704 (1040)
T PLN02189 627 KGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGG--VPPSSS 704 (1040)
T ss_pred cccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcC--CCCCCC
Confidence 11 00 0124456899999999999888533 233345
Q ss_pred hhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhcc
Q 004695 414 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 493 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~ 493 (736)
+.++++||++|+||.||.+|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||+|+.+++.||+||++
T Consensus 705 ~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~ 784 (1040)
T PLN02189 705 PAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWAL 784 (1040)
T ss_pred cHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhh
Confidence 67899999999999999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred ccccccccccCCcccCC--CCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCcccccccchhHHHHHHHHHHH
Q 004695 494 GLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISA 571 (736)
Q Consensus 494 G~~qi~~~~~~pl~~~~--~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~ 571 (736)
|++||+++|+||+++|. ++|++.||++|+++++|| ++++|.++|+++|++||++|++++|.++.+++++|+++|+.+
T Consensus 785 G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~ 863 (1040)
T PLN02189 785 GSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSI 863 (1040)
T ss_pred hhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHH
Confidence 99999999999999763 679999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchh
Q 004695 572 ICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMF 651 (736)
Q Consensus 572 ~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~s~l 651 (736)
++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++++|.||+|..+++.. ++.|+|+ |+++
T Consensus 864 ~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~~----~~ly~f~-~s~l 938 (1040)
T PLN02189 864 FATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDEF----GELYAFK-WTTL 938 (1040)
T ss_pred HHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccccc----ccceeec-ceeH
Confidence 9999999999999999999999999999999999999999999999999999999998765431 4899999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHHH
Q 004695 652 LVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLF 729 (736)
Q Consensus 652 ~~p~~~l~~l~l~a~~~g~~r~~~~~--~~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~~p~~~~~~~~~~~~~~~~ 729 (736)
++|.++++++|++|+++|+++++..+ .|+.+++++++|+|+++|+|||++||++|| +|+|+++++||++++++|++
T Consensus 939 ~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l 1016 (1040)
T PLN02189 939 LIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFSL 1016 (1040)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHH
Confidence 99999999999999999999998755 588999999999999999999999999997 78899999999999999999
Q ss_pred Hhhhhc
Q 004695 730 FGSIIL 735 (736)
Q Consensus 730 ~~~~~~ 735 (736)
++--|+
T Consensus 1017 ~~v~~~ 1022 (1040)
T PLN02189 1017 LWVRID 1022 (1040)
T ss_pred HHheec
Confidence 886553
No 6
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=1.6e-172 Score=1492.47 Aligned_cols=716 Identities=34% Similarity=0.629 Sum_probs=657.5
Q ss_pred CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 004695 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (736)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (736)
.+|||++++.+++. ++||+++++++++++++|.||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 192 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 267 (1044)
T PLN02915 192 RQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRE 267 (1044)
T ss_pred CCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 68899999988874 469999999999999999999988 3456799999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhh
Q 004695 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (736)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa 155 (736)
+++++|.+ ++++|.|||||+||||++|||.+++|||+|+||.|||.||+.|||+|||++.+|+++|.||++||
T Consensus 268 t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 347 (1044)
T PLN02915 268 TYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFA 347 (1044)
T ss_pred cCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHH
Confidence 99998863 23599999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------CC
Q 004695 156 KWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------YG 218 (736)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~-------~~---------~~ 218 (736)
|+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||++.++ |+ +.
T Consensus 348 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~ 427 (1044)
T PLN02915 348 RRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGN 427 (1044)
T ss_pred HhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCC
Confidence 999999999999999999999998 55667778899999999999999999999987643 21 34
Q ss_pred CCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004695 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (736)
Q Consensus 219 ~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~ 298 (736)
..+|||+||||+++++++. |.++.++|+||||+|||||+++||+||||||+.+|+||+|||+|||+++||||+.||
T Consensus 428 ~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nn 503 (1044)
T PLN02915 428 NTRDHPGMIQVYLGSEGAL----DVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINN 503 (1044)
T ss_pred CCCCCccceEEeecCCCCc----ccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCc
Confidence 5689999999999987642 456778999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-cccc
Q 004695 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTH 377 (736)
Q Consensus 299 p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~-~~~~ 377 (736)
|++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| +|+.
T Consensus 504 s~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~ 583 (1044)
T PLN02915 504 SKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPV 583 (1044)
T ss_pred chhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 5542
Q ss_pred cc--------------------------c---------------------------------------------------
Q 004695 378 TV--------------------------N--------------------------------------------------- 380 (736)
Q Consensus 378 ~~--------------------------~--------------------------------------------------- 380 (736)
.+ .
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1044)
T PLN02915 584 SEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEG 663 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00 0
Q ss_pred -------------chhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCcc
Q 004695 381 -------------DISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVS 447 (736)
Q Consensus 381 -------------~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~slt 447 (736)
..+.++++||+|.+|++|+....++ .+....+++++++|++|+||.||.+|+||+++||.|+|+|
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvT 741 (1044)
T PLN02915 664 LEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGG--LPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVT 741 (1044)
T ss_pred cccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcC--CCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccc
Confidence 0112456899999999999886533 3444566789999999999999999999999999999999
Q ss_pred chHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhccccccccccccCCcccC-CCCCChhhHHHHhhHhh
Q 004695 448 EDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSF 526 (736)
Q Consensus 448 ED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~y~~~~~ 526 (736)
||+.||++||++||||+||+|+++++.|++|+|+.++++||+|||+|++|++++++||++++ .++|++.||++|+++++
T Consensus 742 EDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~ 821 (1044)
T PLN02915 742 EDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIV 821 (1044)
T ss_pred cHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999998877899999999999999999999999999999999999975 37999999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHHcCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhCccchhhhhhhHHHHHHHHHHHHH
Q 004695 527 FPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFY 606 (736)
Q Consensus 527 ~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~ 606 (736)
|| +.++|.++|+++|++||++|++++|.++.....+|+++|+++++++++|++|+|.++++|||+||+|+|.+++++++
T Consensus 822 yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lf 900 (1044)
T PLN02915 822 YP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLF 900 (1044)
T ss_pred HH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHH
Confidence 99 99999999999999999999999998777666677788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhc--CCcchHHH
Q 004695 607 GSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV--GNWDKLFP 684 (736)
Q Consensus 607 ~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~s~l~~p~~~l~~l~l~a~~~g~~r~~~~--~~~~~~~~ 684 (736)
+++++++|+||+++++|+||+|+.+.+.++. ++.|+|+ |+++++|+++++++|++|+++|+++++.. +.|+.+++
T Consensus 901 avl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~ 977 (1044)
T PLN02915 901 AVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFG 977 (1044)
T ss_pred HHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 9999999999999999999999876543322 5899999 99999999999999999999999999864 46788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004695 685 QLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 735 (736)
Q Consensus 685 ~~~~~~w~~~~l~p~l~al~~rk~k~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
++++++|+++|++||++||++|+ +|+|+++++||++|+++|++++--|+
T Consensus 978 ~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~v~~~ 1026 (1044)
T PLN02915 978 KLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVWVRID 1026 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHHheec
Confidence 99999999999999999999997 78899999999999999999986553
No 7
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.4e-172 Score=1460.41 Aligned_cols=704 Identities=33% Similarity=0.587 Sum_probs=643.2
Q ss_pred CCCCCCceEeeecCchhHHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 004695 1 MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVS 80 (736)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~ 80 (736)
|.+++|||++++.+++ ++|++.+++++++++|+.||+++..+. .+.|+.+++||+|++++|+|+|+.+|+|++
T Consensus 5 ~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~ 77 (756)
T PLN02190 5 SSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-----DTVWLVAFLCESCFSFVWLLITCIKWSPAE 77 (756)
T ss_pred cCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-----cHHHHHHHHHHHHHHHHHHHhccceeeecC
Confidence 3468899999999887 699999999999999999999997653 247899999999999999999999999999
Q ss_pred cCCCCCCCCC-CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcch
Q 004695 81 RTVFPERLPE-DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWL 159 (736)
Q Consensus 81 r~~~~~~l~~-~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~ 159 (736)
|.++|++|++ -+++|.|||||||+||++|||.+|+|||+|++++|||.||+.|||+|||++++|+++|.||++|||+|+
T Consensus 78 r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 78 YKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 9999998865 346999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC-----CCCCCCCccce
Q 004695 160 PFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE-----YGNSQNHSTII 227 (736)
Q Consensus 160 pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~-------~~~-----~~~~~~h~~ii 227 (736)
||||||+|||||||+||+.... ...+++|++||++||++|||||+|||++.+ +++ +++++|||+||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~~--~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~ii 235 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPPV--ATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIV 235 (756)
T ss_pred ccccccCCCcCCHHHHhcCCCC--CCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccce
Confidence 9999999999999999998532 224579999999999999999999999842 121 57899999999
Q ss_pred eeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004695 228 EIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 228 ~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (736)
||++|++++ +.++.++|+++|++|||||+++||+||||||+.+|+||+|||+|||+++||||+.|||++++++||
T Consensus 236 qVll~~~~~-----~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmC 310 (756)
T PLN02190 236 KVVWENKGG-----VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMC 310 (756)
T ss_pred EEEecCCCC-----ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhh
Confidence 999999664 235678999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCC-CcEEEEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-ccccccc-----
Q 004695 308 FHLDPKIS-SSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTHTVN----- 380 (736)
Q Consensus 308 ~f~Dp~~~-~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~-~~~~~~~----- 380 (736)
||+||+.+ +++||||+||+|+ |+|+|++++||++.++|+||+|||+|+||||+|||+|||| +|+....
T Consensus 311 f~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~ 385 (756)
T PLN02190 311 IFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLS 385 (756)
T ss_pred hhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccccccc
Confidence 99998644 4899999999998 7899999999999999999999999999999999999999 6654211
Q ss_pred --------chhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHH
Q 004695 381 --------DISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFT 452 (736)
Q Consensus 381 --------~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t 452 (736)
..++.+++||+|++|++|+..+..+... .+..+.+++++|++|+||.||.+|+||+++||.|+|+|||+.|
T Consensus 386 ~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~-~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 386 SVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPN-PQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred ccccccccchhhhhhhcCCcHHHHHHHHHHhccCCC-CccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 1234568999999999999887744332 2334578999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhccccccccccccCCcccC-CCCCChhhHHHHhhHhhhhHHh
Q 004695 453 GFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLY 531 (736)
Q Consensus 453 ~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~y~~~~~~~~l~ 531 (736)
|++||++||||+||+|+++++.|.+|+++.+.+.||+||++|++|++++|+||++++ .++|++.||++|++..+ | ++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~ 542 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LR 542 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HH
Confidence 999999999999999888999999999999999999999999999999999999975 57999999999999988 8 99
Q ss_pred HHHHHHHHHHHHHHHHcCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhCccchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004695 532 CLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDT 611 (736)
Q Consensus 532 ~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~ 611 (736)
++|+++|+++|++||++|.+++|+. +++++++++++.+++++++|++|+|+++++||||||||+|.++++|+++++++
T Consensus 543 sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~ 620 (756)
T PLN02190 543 SIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDI 620 (756)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHH
Confidence 9999999999999999999999964 67788888888999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceeeccCCcc-------------hhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhc--
Q 004695 612 ILKLLGLRKASFLPTNKVLD-------------KEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV-- 676 (736)
Q Consensus 612 ~~~~l~~~~~~F~VT~K~~~-------------~~~~~~~~~~~f~f~~~s~l~~p~~~l~~l~l~a~~~g~~r~~~~-- 676 (736)
++|+||+++++|+||+|..+ +++.++|++|+|+|+ +|++++|.++++++|++|+++|+++++..
T Consensus 621 ~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~ 699 (756)
T PLN02190 621 ILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSY 699 (756)
T ss_pred HHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999754 334578899999999 99999999999999999999999987642
Q ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHHHHh
Q 004695 677 ---GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFG 731 (736)
Q Consensus 677 ---~~~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~~p~~~~~~~~~~~~~~~~~~ 731 (736)
+.++. ++++++|+|+|++++||++||+ |||||+||+|++++|++|+++|++|+
T Consensus 700 s~~~~~~~-l~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 700 SHGGGGSG-LAEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred ccCccccc-HHHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 34554 4999999999999999999998 99999999999999999999999985
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=2.3e-172 Score=1492.28 Aligned_cols=719 Identities=31% Similarity=0.568 Sum_probs=650.0
Q ss_pred CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 004695 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (736)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (736)
.+|||++++.++.. ++||+++++++++++++|.||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 47799999988873 469999999999999999999988 3456799999999999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHH
Q 004695 83 VFPERLPE------------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMRE 150 (736)
Q Consensus 83 ~~~~~l~~------------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~E 150 (736)
+++++|.+ ++++|.||||||||||++|||.+++|||+|+|+.|||.|||.|||+|||++.+|+++|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99887743 246999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc---------------
Q 004695 151 ACRFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED--------------- 214 (736)
Q Consensus 151 a~~fa~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~--------------- 214 (736)
|++|||+||||||||+||||+||+||+.+ ++.+++..++|++||++||++|||||+|||.+.+.
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 99999999999999999999999999988 54556778999999999999999999999987320
Q ss_pred ----------C------------C----------------CCCCCCCccceeeeecccCcchh----------hhhcccc
Q 004695 215 ----------G------------E----------------YGNSQNHSTIIEIIQETFGESET----------IRQADLV 246 (736)
Q Consensus 215 ----------~------------~----------------~~~~~~h~~ii~v~~~~~~~~~~----------~~~~~~~ 246 (736)
+ + +++++|||+||||++++++.+++ +.+..+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 0 1 35889999999999988763221 1223445
Q ss_pred CCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcc
Q 004695 247 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQK 326 (736)
Q Consensus 247 ~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~ 326 (736)
++|+||||+|||||+++||+||||||+.+|+|++|||||||+|+||||++|||++++++||||+||+ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999996 889999999999
Q ss_pred cccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-cccccc--------------------------
Q 004695 327 FHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTHTV-------------------------- 379 (736)
Q Consensus 327 f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~-~~~~~~-------------------------- 379 (736)
|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+|||| +|+...
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999 665420
Q ss_pred ---------cchhhhhhhcCCchhhhhhhhhhhcc-cCC-----------------CCCCchhhhHhhhccccccccccc
Q 004695 380 ---------NDISELKDTFGKSNVLINSLHQSYKQ-NNA-----------------NGENFSNVLQEETGVLASCSYEHQ 432 (736)
Q Consensus 380 ---------~~~~~~~~~~g~~~~~~~s~~~~~~~-~~~-----------------~~~~~~~~~~~~~~~v~~c~ye~~ 432 (736)
.....+.++||+|..|++|+..+..+ .+. +....+.++++||+.|+||.||.+
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 00122356899999999999776521 111 223345678999999999999999
Q ss_pred ccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhccccccccccccCCcccCCCC
Q 004695 433 TKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSR 512 (736)
Q Consensus 433 t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~ 512 (736)
|+||+++||.|+|+|||+.||++||++||||+||+++++++.|++|+|+.++++||+||++|++||+++|+||++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999999875 79
Q ss_pred CChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCcccccccchhHHHHH-HHHHHHHHHHHHHHHHhCccchhhhh
Q 004695 513 MSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFS-FIFISAICKHLQEVISTGGSIYAWRN 591 (736)
Q Consensus 513 L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~g~~~~~~w~ 591 (736)
|++.||++|+++++|| +.++|.++|+++|++||++|++++|+. .+++++++ .+++.+++++++|++|+|.++++|||
T Consensus 901 Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWr 978 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWR 978 (1135)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhh
Confidence 9999999999999999 999999999999999999999999986 45555554 44677889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHH
Q 004695 592 EQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFI 671 (736)
Q Consensus 592 ~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~s~l~~p~~~l~~l~l~a~~~g~~ 671 (736)
+||+|+|.++++++++++++++|+||+++++|+||+|+.+++.+++| ++.|+|+ |+++++|+++++++|++|+++|++
T Consensus 979 nQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~ 1056 (1135)
T PLN02248 979 NEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVS 1056 (1135)
T ss_pred hhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877666677 6899999 999999999999999999999999
Q ss_pred HHhhc--CCcchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHHHHhhhh
Q 004695 672 RIIAV--GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSII 734 (736)
Q Consensus 672 r~~~~--~~~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~~p~~~~~~~~~~~~~~~~~~~~~ 734 (736)
|++.+ +.|+.+++++++++|+++++|||++||++| |+|+|+++++||+++++++++++--|
T Consensus 1057 R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll~v~~ 1119 (1135)
T PLN02248 1057 RTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLLWVAI 1119 (1135)
T ss_pred HHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHHheEe
Confidence 99864 346788999999999999999999999999 88889999999999999999988554
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=3.8e-171 Score=1457.04 Aligned_cols=702 Identities=40% Similarity=0.749 Sum_probs=646.1
Q ss_pred CCCCCceEeeecCchhHHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 004695 2 DSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (736)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r 81 (736)
.+.+||||+++.+++ .+||+++++++++++++++||+.+.... ...|.|+++++||+||+|+|+++|+.||+|++|
T Consensus 9 ~~~~pL~~~~~~~~~-~~~R~~~~~~~~~i~~ll~~r~~~~~~~---~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHS---TTTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeecCCc-hHHHHHHHHHHHHHHHHHHHHhcccccc---cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 357899999998886 5799999999999999999999987653 237899999999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcc
Q 004695 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWW 158 (736)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w 158 (736)
.+++++|.+ .+++|.||||||||||++|||.++.|||+|+|+.|||.||+.|||+|||++++|+++|.||++|||+|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999874 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCC--------------------CC
Q 004695 159 LPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGE--------------------YG 218 (736)
Q Consensus 159 ~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~--------------------~~ 218 (736)
+||||||+|||||||+||+.+. +++.+||++||++|||||+|||++.+.|+ ++
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~~-------~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSNS-------HSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccCC-------CccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 9999999999999999999872 34678999999999999999999853332 45
Q ss_pred CCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004695 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (736)
Q Consensus 219 ~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~ 298 (736)
+++|||+||||++|++++. |.++.++|+++|++|||||+++||+||||||+++++|++|||||||+++||||++||
T Consensus 238 ~~~dH~~ivqV~l~~~~~~----d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKDK----DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred CCCCCCceeeeeccCCCcc----chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 7999999999999997643 456678999999999999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeeccccccccccc
Q 004695 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHT 378 (736)
Q Consensus 299 p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~ 378 (736)
|++++++||||+||+.++++|+||+||+|+|++++|+|+|++++||+++++|+||+||++||||||+|||+||+|.+...
T Consensus 314 p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~ 393 (734)
T PLN02893 314 PQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSL 393 (734)
T ss_pred hhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccc
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999843210
Q ss_pred ccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHH
Q 004695 379 VNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHC 458 (736)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~ 458 (736)
. .+....++.+. ........++++++|++|+||.||.+|.||+++||.|+|+|||++||++||+
T Consensus 394 ~---~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~ 457 (734)
T PLN02893 394 I---LPEIPELNPDH-------------LVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQC 457 (734)
T ss_pred c---chhhhhccccc-------------ccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHh
Confidence 0 00000111100 0111234567899999999999999999999999999999999999999999
Q ss_pred cCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhccccccccccccCCcccCCCCCChhhHHHHhhHhhhhHHhHHHHHHH
Q 004695 459 KGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCL 538 (736)
Q Consensus 459 ~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~y~~~~~~~~l~~~~~l~~ 538 (736)
+||||+||+|+++++.|++|+|+.+++.||+||++|++|++++|+||+++|.++|++.||++|++.++|+ ++++|.++|
T Consensus 458 ~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY 536 (734)
T PLN02893 458 EGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIY 536 (734)
T ss_pred cCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHH
Confidence 9999999987778999999999999999999999999999999999999877899999999999999999 999999999
Q ss_pred HHHHHHHHHcCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 004695 539 ATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGL 618 (736)
Q Consensus 539 ~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~ 618 (736)
+++|++||++|++++|+++.+|+++++++++++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+
T Consensus 537 ~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~ 616 (734)
T PLN02893 537 AFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGI 616 (734)
T ss_pred HHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Q 004695 619 RKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFA 698 (736)
Q Consensus 619 ~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~s~l~~p~~~l~~l~l~a~~~g~~r~~~~~~~~~~~~~~~~~~w~~~~l~p 698 (736)
++++|+||+|+.+.++.++|++|.|+|+.++|+++|+++++++|++|+++|+++++.++.++++++++++|+|++++++|
T Consensus 617 s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P 696 (734)
T PLN02893 617 STFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWP 696 (734)
T ss_pred cCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999887778899999999997799999999999999999999999998777788889999999999999999
Q ss_pred HHHHHhhccCCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004695 699 IVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 735 (736)
Q Consensus 699 ~l~al~~rk~k~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
|++||++|||||+||+|+++||++|+++++.+.+++.
T Consensus 697 ~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~ 733 (734)
T PLN02893 697 IYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAF 733 (734)
T ss_pred HHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999875
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=6.8e-161 Score=1362.08 Aligned_cols=627 Identities=44% Similarity=0.782 Sum_probs=585.4
Q ss_pred EEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccc
Q 004695 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (736)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (736)
|||||+||||++|||.++.|||+|+|++|||.||++|||+|||++++|+++|.||++|||+||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------CCCCCCCccceeeeecccCcchh
Q 004695 177 SEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------YGNSQNHSTIIEIIQETFGESET 239 (736)
Q Consensus 177 ~~~-~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~-------~~~---------~~~~~~h~~ii~v~~~~~~~~~~ 239 (736)
+.+ +..+++.+++|++||++||++|||||+|||.+.+ +++ +++++|||+||||+++++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~-- 158 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK-- 158 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc--
Confidence 998 6777788999999999999999999999998743 222 468999999999999998753
Q ss_pred hhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEE
Q 004695 240 IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 319 (736)
Q Consensus 240 ~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg 319 (736)
|.++.++|+|+|++|||||+++||+||||||+++|+|++|||+|||+++||||+.|||+.++++||||+||+.++++|
T Consensus 159 --~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~ 236 (720)
T PF03552_consen 159 --DVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIA 236 (720)
T ss_pred --ccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeE
Confidence 667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCcccccCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccc-cccccc-------------------
Q 004695 320 FVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTHTV------------------- 379 (736)
Q Consensus 320 ~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~-~~~~~~------------------- 379 (736)
|||+||+|+|++++|+|+|++++||+++++|+||+|||+|+||||+|||+||+| +|+...
T Consensus 237 ~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~ 316 (720)
T PF03552_consen 237 FVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKK 316 (720)
T ss_pred EEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccc
Confidence 999999999999999999999999999999999999999999999999999999 666411
Q ss_pred ------c-----------------------------------chhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhH
Q 004695 380 ------N-----------------------------------DISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 418 (736)
Q Consensus 380 ------~-----------------------------------~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
. ..++++++||+|++||+|+..+.. ..+.+....+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~L 394 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASLL 394 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHHH
Confidence 0 012456789999999999986543 344455668899
Q ss_pred hhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhccccccc
Q 004695 419 EETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 498 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi 498 (736)
+||++|+||.||.+|+||+++||.|+++|||+.||++||++||||+||+|++++|.|.||+|+.+.+.|++|||.|++||
T Consensus 395 ~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI 474 (720)
T PF03552_consen 395 EEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEI 474 (720)
T ss_pred HHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEee
Confidence 99999999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred cccccCCcccC-CCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCcccccccchhHHHHHHHHHHHHHHHHH
Q 004695 499 GLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQ 577 (736)
Q Consensus 499 ~~~~~~pl~~~-~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ll 577 (736)
+++|+||++++ +++|++.||++|+++++|+ ++++|.++|+++|++||++|++++|+++.+++++|+++|+++++++++
T Consensus 475 ~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~ll 553 (720)
T PF03552_consen 475 FFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLL 553 (720)
T ss_pred ehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHH
Confidence 99999999997 6799999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhHHHHHH
Q 004695 578 EVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVS 657 (736)
Q Consensus 578 ~~~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~s~l~~p~~~ 657 (736)
|++|+|.++++|||+||+|+|.++++|+++++++++|++|+++++|.||+|..++++++. .+.|+|+ |+++++|.++
T Consensus 554 E~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~--~ely~f~-wS~LfiP~tT 630 (720)
T PF03552_consen 554 EFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKY--AELYIFK-WSPLFIPPTT 630 (720)
T ss_pred HHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccccccccc--ccccccc-ccchhhHHHH
Confidence 999999999999999999999999999999999999999999999999999987544333 3678888 8999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004695 658 LMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 735 (736)
Q Consensus 658 l~~l~l~a~~~g~~r~~~~~--~~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~~p~~~~~~~~~~~~~~~~~~~~~~ 735 (736)
++++|++|+++|+++++..+ +|+++++++++++|+++|+|||++||++||+ |+|+++++||++||++|++++--|+
T Consensus 631 llilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv~i~ 708 (720)
T PF03552_consen 631 LLILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWVRID 708 (720)
T ss_pred HHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHheecc
Confidence 99999999999999988654 6889999999999999999999999999976 5999999999999999999987664
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.1e-72 Score=667.57 Aligned_cols=508 Identities=26% Similarity=0.326 Sum_probs=411.6
Q ss_pred HHHHHHHHHHH-HHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCCCcEE
Q 004695 20 NRLHALLHCIA-IGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID 98 (736)
Q Consensus 20 ~R~~~~~~~~~-~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~Vd 98 (736)
-|++.++..++ .+.|++||++.|+|..+.....++++++++|+++.+..+++.+..++|.+|.+.+.+ .+++.+|+||
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~Vs 134 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTVD 134 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCeeE
Confidence 36665555554 677999999999997666677788999999999988888888888788777543321 1256789999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+++++++|+.+++++|||+|+++|+|+|||++|.|.....++++
T Consensus 135 ViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------- 186 (713)
T TIGR03030 135 VFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------- 186 (713)
T ss_pred EEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh-------------------------
Confidence 99999 99998999999999999999999999999999999988543322111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
+..+.+.++++.+++ .++.|++|++
T Consensus 187 ----------~~~~~~~~~~~l~~~---------------------------------------------~~v~yi~r~~ 211 (713)
T TIGR03030 187 ----------EAAQRREELKEFCRK---------------------------------------------LGVNYITRPR 211 (713)
T ss_pred ----------hhhhhHHHHHHHHHH---------------------------------------------cCcEEEECCC
Confidence 000112222222221 1478999887
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCCc---C-
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINK---Y- 333 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n~~~---~- 333 (736)
+ +|+||||||+|+++ ++||+|+++|||++++ ||+|++++++|. || ++|+||+||.|+|.+. +
T Consensus 212 n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl 278 (713)
T TIGR03030 212 N----VHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDP----KLFLVQTPHFFVSPDPIERNL 278 (713)
T ss_pred C----CCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCC----CEEEEeCCeeccCCCHHhhhh
Confidence 5 68999999999999 8999999999999998 999999999995 66 6999999999998542 1
Q ss_pred ---ChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCC
Q 004695 334 ---DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANG 410 (736)
Q Consensus 334 ---d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~ 410 (736)
+.+.++...||..++.|.|.++++++||+++++||++++
T Consensus 279 ~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~-------------------------------------- 320 (713)
T TIGR03030 279 GTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALD-------------------------------------- 320 (713)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHH--------------------------------------
Confidence 233456678999999999999999999999999999995
Q ss_pred CCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhh
Q 004695 411 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
+.+||++++++||++++++||++||+++|+++ +.+.|++|+|++++++||.|
T Consensus 321 --------------------------~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl~~~~~Qr~R 372 (713)
T TIGR03030 321 --------------------------EIGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETLSGHIGQRIR 372 (713)
T ss_pred --------------------------HcCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCHHHHHHHHHH
Confidence 24689999999999999999999999999985 88999999999999999999
Q ss_pred hccccccccccccCCcccCCCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCcccccccchhHHHHHHHHHH
Q 004695 491 WGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFIS 570 (736)
Q Consensus 491 Wa~G~~qi~~~~~~pl~~~~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~ 570 (736)
|++|++|+++. .||++. +++++.||++|+++++|+ +++++.++|+++|++++++|++++++ + . ..++ +.++|
T Consensus 373 Wa~G~~qi~~~-~~pl~~--~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~-~-~-~~~~-~~~lp 444 (713)
T TIGR03030 373 WAQGMMQIFRL-DNPLLK--RGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVA-S-A-LEIL-AYALP 444 (713)
T ss_pred HhcChHHHHhh-hCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeC-C-H-HHHH-HHHHH
Confidence 99999999974 589886 799999999999999999 99999999999999999999999875 2 2 2222 23467
Q ss_pred HHHHHHHHHHH-hCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccc
Q 004695 571 AICKHLQEVIS-TGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSS 649 (736)
Q Consensus 571 ~~~~~ll~~~~-~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~s 649 (736)
+++.+++.+.+ .|.....||++ ++. +...++.+..++.+++++++.+|+||||++..++. . .+
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~------~-----~~ 508 (713)
T TIGR03030 445 HMLHSLLTNSYLFGRVRWPFWSE----VYE-TVLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED------Y-----FS 508 (713)
T ss_pred HHHHHHHHHHHHcCCeecchHHH----HHH-HHHHHHHHHHHHHHHhCcCCCCceecCCCcccccc------c-----cc
Confidence 77777766443 46666788987 333 33556777888888999999999999999765431 1 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCch
Q 004695 650 MFLVPMVSLMILNMAALLCGFIRIIAVGN-WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISP 714 (736)
Q Consensus 650 ~l~~p~~~l~~l~l~a~~~g~~r~~~~~~-~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~~p~ 714 (736)
++++|+++++++|++|+++|++|+...+. ...+.++++|++++++.+...+.+...|+++++-|.
T Consensus 509 ~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~R 574 (713)
T TIGR03030 509 PLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPR 574 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCccc
Confidence 78999999999999999999999874332 345679999999999999999998888888877554
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=5.9e-73 Score=667.59 Aligned_cols=488 Identities=24% Similarity=0.333 Sum_probs=396.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCC-CCCCCcEEE
Q 004695 21 RLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPAIDV 99 (736)
Q Consensus 21 R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~VdV 99 (736)
-+++++.+++.+.|++||++.|+|..+..+.+++++++++|+++.+..+++.+...+|..|++. .++. .+.+|+|||
T Consensus 187 ~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--~~~~~~~~~P~VsV 264 (852)
T PRK11498 187 LMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--PLPKDMSLWPTVDI 264 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCCcccCCCCcEEE
Confidence 3444555666888999999999997667778888999999999998888888888778777532 2332 467899999
Q ss_pred EEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccccC
Q 004695 100 FICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEA 179 (736)
Q Consensus 100 ~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~~ 179 (736)
+||| |||+.+++++|+.+++++|||+++++|||+|||++|.|. + +|+++
T Consensus 265 iIPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~-------~-------la~~~-------------- 313 (852)
T PRK11498 265 FVPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFR-------Q-------FAQEV-------------- 313 (852)
T ss_pred EEec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHH-------H-------HHHHC--------------
Confidence 9999 999988999999999999999999999999999999431 1 11111
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCC
Q 004695 180 DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKR 259 (736)
Q Consensus 180 ~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rekr 259 (736)
++.|++|+++
T Consensus 314 ----------------------------------------------------------------------~v~yI~R~~n 323 (852)
T PRK11498 314 ----------------------------------------------------------------------GVKYIARPTH 323 (852)
T ss_pred ----------------------------------------------------------------------CcEEEEeCCC
Confidence 3678888764
Q ss_pred CCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCcCC----
Q 004695 260 PEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYD---- 334 (736)
Q Consensus 260 p~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~Dp~~~~~vg~VQ~Pq~f~n~~~~d---- 334 (736)
.|+||||+|+|+++ ++||||+++|||+++. ||+|++++++| .|| ++|+||+||.|+|.++-.
T Consensus 324 ----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl~ 390 (852)
T PRK11498 324 ----EHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNLG 390 (852)
T ss_pred ----CcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCC----CeEEEEcceeccCCchHHHhhH
Confidence 68999999999999 8999999999999998 99999999876 566 699999999999853211
Q ss_pred ---hHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCC
Q 004695 335 ---IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGE 411 (736)
Q Consensus 335 ---~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~ 411 (736)
.+.++.+.||+.++.|.+.+++.++||+++++||++++
T Consensus 391 ~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe--------------------------------------- 431 (852)
T PRK11498 391 RFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD--------------------------------------- 431 (852)
T ss_pred HHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH---------------------------------------
Confidence 12245568999999999999999999999999999995
Q ss_pred CchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhh
Q 004695 412 NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRW 491 (736)
Q Consensus 412 ~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RW 491 (736)
+.+||++++++||+++++++|++||+++|+++ +.+.|++|+|+.++++||.||
T Consensus 432 -------------------------eVGGfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RW 484 (852)
T PRK11498 432 -------------------------EIGGIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRW 484 (852)
T ss_pred -------------------------HhcCCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHH
Confidence 25689999999999999999999999999985 899999999999999999999
Q ss_pred ccccccccccccCCcccCCCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCcccccccchhHHHHHHHHHHH
Q 004695 492 GSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISA 571 (736)
Q Consensus 492 a~G~~qi~~~~~~pl~~~~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~ 571 (736)
++|++|+++ ++||++. +++++.||++|+++++|+ +.++|.++|+++|++|+++|+.++.+ ++..++. .++|+
T Consensus 485 arG~lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a---~~~~i~~-y~lP~ 556 (852)
T PRK11498 485 ARGMVQIFR-LDNPLTG--KGLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYA---PALMIAL-FVLPH 556 (852)
T ss_pred HHHHHHHHH-HhChhcc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeC---ChHHHHH-HHHHH
Confidence 999999997 5789875 799999999999999999 99999999999999999999988753 2222232 34565
Q ss_pred HHHHHHHH-HHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccch
Q 004695 572 ICKHLQEV-ISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSM 650 (736)
Q Consensus 572 ~~~~ll~~-~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~s~ 650 (736)
++...+.. ...|.....||++ ++.++++ ++....++..++++++.+|+||||++..++ +.|+|+
T Consensus 557 ~~~~~l~~~~~~g~~r~~~wse----iye~v~a-~~l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~~~~~---- 621 (852)
T PRK11498 557 MIHASLTNSRIQGKYRHSFWSE----IYETVLA-WYIAPPTTVALFNPHKGKFNVTAKGGLVEE------EYVDWV---- 621 (852)
T ss_pred HHHHHHHHHHhcCcchHhHHHH----HHHHHHH-HHHHHHHHHHHcCccCCCcccCCCCccccc------cceehH----
Confidence 55443333 3345556678876 3444434 444455667789999999999999976544 677776
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCC--cchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 004695 651 FLVPMVSLMILNMAALLCGFIRIIAVGN--WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRIS 713 (736)
Q Consensus 651 l~~p~~~l~~l~l~a~~~g~~r~~~~~~--~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~~p 713 (736)
+..|+++++++|++|+++|++++..+.. ...+..+++|++++++.+...+.+.+.++..++-|
T Consensus 622 ~~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 622 ISRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVRRSH 686 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 4578999999999999999999875322 24567889999999888888888888776655544
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=6.2e-39 Score=374.74 Aligned_cols=361 Identities=17% Similarity=0.128 Sum_probs=250.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCc--hhHHH---HHHHHHHHHHHHHHHHHHHHhhhcccccCCCC---CC--C
Q 004695 19 INRLHALLHCIAIGFLIYYRASYLLQETRA--IPIIL---WLLVFASELLLSFIWLLGRAYLWRPVSRTVFP---ER--L 88 (736)
Q Consensus 19 ~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~--~~~~~---w~~l~~~E~~~~~~~~l~~~~~~~p~~r~~~~---~~--l 88 (736)
+.|++.++..++.+.|..|+...+++..+. ....+ -.+++..+.+.+...+++.+...+ .|.... +. -
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 678888888888999999999998876431 11111 122334444444444444433322 111111 00 0
Q ss_pred CCCCCCCcEEEEEecCCCCCCchHH----HHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhh
Q 004695 89 PEDDKLPAIDVFICTADPEKEPAIG----VMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRR 164 (736)
Q Consensus 89 ~~~~~~P~VdV~Vpt~~pynEp~~~----v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~ 164 (736)
+.....|+|+|+||+ |||+++. ++.+++|+.+++||. +++++|+||+++|.|-..
T Consensus 118 ~~~~~~~~VaVliP~---yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~----------------- 176 (691)
T PRK05454 118 PPPPPEARTAILMPI---YNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA----------------- 176 (691)
T ss_pred CCCCCCCceEEEEeC---CCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH-----------------
Confidence 113457999999999 9999864 556666777799984 799999999999854210
Q ss_pred cCcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhcc
Q 004695 165 YGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQAD 244 (736)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~ 244 (736)
|. +.+++++.+.
T Consensus 177 ----------------------------e~----~~~~~L~~~~------------------------------------ 188 (691)
T PRK05454 177 ----------------------------EE----AAWLELRAEL------------------------------------ 188 (691)
T ss_pred ----------------------------HH----HHHHHHHHhc------------------------------------
Confidence 11 1122222211
Q ss_pred ccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEcc
Q 004695 245 LVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQF 323 (736)
Q Consensus 245 ~~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~ 323 (736)
..-+++.|.+|++| .+.||||+|++++.++ .++|||+++|||++++ ||++++++.+|. || ++|.||+
T Consensus 189 -~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP----~vGlVQt 256 (691)
T PRK05454 189 -GGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANP----RAGLIQT 256 (691)
T ss_pred -CCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCc----CEEEEeC
Confidence 00135889888765 6789999999999866 6789999999999998 999999999886 77 6999999
Q ss_pred CcccccCCcCChHHHHH----HHHHHHHHHHhhhcCC--cccccccceeecccccccccccccchhhhhhhcCCchhhhh
Q 004695 324 PQKFHNINKYDIYDGRF----RSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLIN 397 (736)
Q Consensus 324 Pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~g--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (736)
++.+.|. +..++.-+ .++......|.+.+++ ..|+|+|+++||+++.+.
T Consensus 257 ~~~~~n~--~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~----------------------- 311 (691)
T PRK05454 257 LPVAVGA--DTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEH----------------------- 311 (691)
T ss_pred CccCcCC--CCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHh-----------------------
Confidence 9998885 23444322 2344456778777653 468999999999999630
Q ss_pred hhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeec
Q 004695 398 SLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTS 477 (736)
Q Consensus 398 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~a 477 (736)
|... .....+||..++++||+++|.+++++||+++|+++ .+.+++++
T Consensus 312 -----------------------------~glp---~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~ 358 (691)
T PRK05454 312 -----------------------------CGLP---PLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEEL 358 (691)
T ss_pred -----------------------------cCCc---cccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccC
Confidence 1000 00013578889999999999999999999999984 25689999
Q ss_pred CCChHHHhhhhhhhccccccccccccCCcccCCCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHH
Q 004695 478 TTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCL 546 (736)
Q Consensus 478 P~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~L 546 (736)
|+|+.++++||.||++|++|++.. +.. +++++.+|+.|+...+.++...++.+++++.|++.+
T Consensus 359 P~tl~~~~~qr~RW~~G~lQ~l~~----l~~--~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~~ 421 (691)
T PRK05454 359 PPNLLDELKRDRRWCQGNLQHLRL----LLA--KGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALAL 421 (691)
T ss_pred CCCHHHHHHHHHHHHhchHHHHHH----HHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998752 222 689999999988766555233444444444444443
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=2e-35 Score=333.37 Aligned_cols=230 Identities=19% Similarity=0.179 Sum_probs=186.1
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (736)
.+..|.|+|+||+ |||+ ..+++|+.|+++++||+ ++|+|+|||++|.|.+.+.|..+
T Consensus 71 ~~~~p~vsViIP~---yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~----------------- 127 (444)
T PRK14583 71 LKGHPLVSILVPC---FNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLA----------------- 127 (444)
T ss_pred cCCCCcEEEEEEe---CCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 3457999999999 9999 67899999999999995 99999999999987543322110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 004695 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
+.|+
T Consensus 128 ----------------------------------------------------------------------------~~~~ 131 (444)
T PRK14583 128 ----------------------------------------------------------------------------EDPR 131 (444)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0134
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCccccc
Q 004695 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n 329 (736)
+.++.+++ +++||+|+|.|++. +++|+++++|||++++ ||++++++..|. || ++|.||+.....|
T Consensus 132 v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~~-~d~L~~lv~~~~~~~----~~g~v~g~~~~~~ 197 (444)
T PRK14583 132 LRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALLD-KNAVPYLVAPLIANP----RTGAVTGNPRIRT 197 (444)
T ss_pred EEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCcC-HHHHHHHHHHHHhCC----CeEEEEccceecC
Confidence 55665544 46799999999999 8999999999999997 999999998775 44 6999999877665
Q ss_pred CCcCChHHH----HHHHHHHHHHHHhhhcCCcc-cccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhc
Q 004695 330 INKYDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYK 404 (736)
Q Consensus 330 ~~~~d~~~~----~~~~f~~~~~~g~d~~~g~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~ 404 (736)
. +..++. +...+++.+.++.+..+..+ .+|+++.+||+++.
T Consensus 198 ~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~-------------------------------- 243 (444)
T PRK14583 198 R--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALA-------------------------------- 243 (444)
T ss_pred C--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHH--------------------------------
Confidence 3 222322 33345555666666666654 46888999999994
Q ss_pred ccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHH
Q 004695 405 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDL 484 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~ 484 (736)
+.+||++++++||+++++|++.+||++.|+++ +.++++.|+|++++
T Consensus 244 --------------------------------~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~ 289 (444)
T PRK14583 244 --------------------------------DVGYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGL 289 (444)
T ss_pred --------------------------------HcCCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHH
Confidence 24579999999999999999999999999985 99999999999999
Q ss_pred hhhhhhhcccccccccc
Q 004695 485 LIQGTRWGSGLTDVGLS 501 (736)
Q Consensus 485 ~~Qr~RWa~G~~qi~~~ 501 (736)
++||.||++|.+|++++
T Consensus 290 ~~Qr~RW~~G~~~~~~~ 306 (444)
T PRK14583 290 WKQRLRWAQGGAEVFLK 306 (444)
T ss_pred HHHHHHHhCcHHHHHHH
Confidence 99999999999999975
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=5.4e-37 Score=321.55 Aligned_cols=241 Identities=16% Similarity=0.197 Sum_probs=184.9
Q ss_pred EEEEEecCCCCCCchHHHHHHHHHHHc----CCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004695 97 IDVFICTADPEKEPAIGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~~~----~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (736)
|+|+||+ |||+++++.+|+.+.+. ++|+. +++|+|+|||+++...
T Consensus 1 ~SIliP~---~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--------------------------- 49 (254)
T cd04191 1 TAIVMPV---YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--------------------------- 49 (254)
T ss_pred CEEEEeC---CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH---------------------------
Confidence 6899999 99999999999999875 56622 4999999999887210
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 004695 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
..|...+.++.+++ ...++++
T Consensus 50 ------------------~~~~~~~~~l~~~~-----------------------------------------~~~~~v~ 70 (254)
T cd04191 50 ------------------LAEEAAWLDLCEEL-----------------------------------------GAQGRIY 70 (254)
T ss_pred ------------------HHHHHHHHHHHHHh-----------------------------------------CCCCcEE
Confidence 01111111121111 0124699
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCC
Q 004695 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (736)
Q Consensus 253 yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n~~ 331 (736)
|++|+++ .|.||||||+++...+ +++|+|+++|||++++ |++|++++.+|. || ++|+||+|+.+.|.+
T Consensus 71 ~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~----~vg~vq~~~~~~n~~ 139 (254)
T cd04191 71 YRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANP----RAGIIQTAPKLIGAE 139 (254)
T ss_pred EEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCC----CEEEEeCCceeECCC
Confidence 9999886 6889999999998744 6789999999999998 999999999996 77 699999999999853
Q ss_pred cCChHHH----HHHHHHHHHHHHhhhcCC--cccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcc
Q 004695 332 KYDIYDG----RFRSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQ 405 (736)
Q Consensus 332 ~~d~~~~----~~~~f~~~~~~g~d~~~g--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~ 405 (736)
..+.. +...|...++.|++.+++ .+|+|+++++||++|+..
T Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~------------------------------- 186 (254)
T cd04191 140 --TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEH------------------------------- 186 (254)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHh-------------------------------
Confidence 22322 233455677788877644 578999999999999630
Q ss_pred cCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCe-eEeecCCChHHH
Q 004695 406 NNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ-FLGTSTTNLNDL 484 (736)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~-~~g~aP~tl~~~ 484 (736)
|.. ...|..+||.+++++||+++|++++++||+++|.++ +. +++++|+|++++
T Consensus 187 ---------------------~~~---~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~--~~~~~~~~p~~~~~~ 240 (254)
T cd04191 187 ---------------------CAL---PVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPD--LEGSYEECPPTLIDF 240 (254)
T ss_pred ---------------------cCC---ccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccC--CcceEeECCCCHHHH
Confidence 000 001123568889999999999999999999999985 54 689999999999
Q ss_pred hhhhhhhcccccc
Q 004695 485 LIQGTRWGSGLTD 497 (736)
Q Consensus 485 ~~Qr~RWa~G~~q 497 (736)
++||.||++|++|
T Consensus 241 ~~qr~RW~~G~~q 253 (254)
T cd04191 241 LKRDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHHHhhcCc
Confidence 9999999999998
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.8e-35 Score=331.08 Aligned_cols=233 Identities=26% Similarity=0.308 Sum_probs=182.5
Q ss_pred CCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcc
Q 004695 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (736)
.|.|||+||+ |||+++++++|+.|+.++|||. ++|+|+|||++|.|.+.+. +++.+
T Consensus 53 ~p~vsviiP~---ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~--------------~~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPA---YNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILE--------------ELGAE----- 108 (439)
T ss_pred CCceEEEEec---CCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHH--------------HHHhh-----
Confidence 5999999999 9999889999999999999998 9999999999996654222 22110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEE
Q 004695 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
+ + |.++.
T Consensus 109 ---------------------------~----------------------~------------------------~~~~~ 115 (439)
T COG1215 109 ---------------------------Y----------------------G------------------------PNFRV 115 (439)
T ss_pred ---------------------------c----------------------C------------------------cceEE
Confidence 0 0 11222
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcC
Q 004695 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 333 (736)
Q Consensus 254 v~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~ 333 (736)
+..++ .+++|++|+|.++.. +++|+|+++|||++++ ||+|++++.+|.|+. .++.+|.|+.+.+.+..
T Consensus 116 ~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~---~~~v~~~~~~~~~~~~~ 183 (439)
T COG1215 116 IYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSPFEDPP---VGAVVGTPRIRNRPDPS 183 (439)
T ss_pred Eeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhhhcCCC---eeEEeCCceeeecCChh
Confidence 21112 368999999999999 8899999999999998 999999999999874 34799999877764221
Q ss_pred ChHHHHHHHHHH-----HHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCC
Q 004695 334 DIYDGRFRSAYC-----VQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNA 408 (736)
Q Consensus 334 d~~~~~~~~f~~-----~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~ 408 (736)
...+..+.+.|. ....+.+.....+++|+++++||++|.
T Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~------------------------------------ 227 (439)
T COG1215 184 NLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALE------------------------------------ 227 (439)
T ss_pred hhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHH------------------------------------
Confidence 222222222222 222222322456789999999999995
Q ss_pred CCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhh
Q 004695 409 NGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQG 488 (736)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr 488 (736)
+.+||..+++|||.++++++|.+|||+.|+++ +.+++++|+|+.++++||
T Consensus 228 ----------------------------~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr 277 (439)
T COG1215 228 ----------------------------EVGGWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQR 277 (439)
T ss_pred ----------------------------HhCCCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHH
Confidence 24579999999999999999999999999985 899999999999999999
Q ss_pred hhhcccccccccc
Q 004695 489 TRWGSGLTDVGLS 501 (736)
Q Consensus 489 ~RWa~G~~qi~~~ 501 (736)
.||++|.+|++..
T Consensus 278 ~RW~~g~~~~~~~ 290 (439)
T COG1215 278 LRWARGGLQVLLL 290 (439)
T ss_pred HHHHcccceeeeh
Confidence 9999999999974
No 17
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=4.3e-34 Score=322.12 Aligned_cols=282 Identities=17% Similarity=0.169 Sum_probs=203.4
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (736)
.+..|+|+|+||+ |||+ +.+.+||.|+.+++||.++++|+|+|||++|.|.+.+.|+++
T Consensus 45 ~~~~P~vsVIIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------------- 103 (439)
T TIGR03111 45 IGKLPDITIIIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------------- 103 (439)
T ss_pred cCCCCCEEEEEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 3568999999999 9999 899999999999999999999999999999987653332210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 004695 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
..|+
T Consensus 104 ----------------------------------------------------------------------------~~~~ 107 (439)
T TIGR03111 104 ----------------------------------------------------------------------------EFPG 107 (439)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0112
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCccccc
Q 004695 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n 329 (736)
+....-++ ++|||+|+|.|++. +++|+|+++|||++++ ||++++++..|. || +++.|++.+.-..
T Consensus 108 v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~----~v~~v~g~~~~~~ 173 (439)
T TIGR03111 108 LSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKLH-KDAIKNMVTRFENNP----DIHAMTGVILTDK 173 (439)
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCcC-hHHHHHHHHHHHhCC----CeEEEEeEEecCc
Confidence 22221122 47999999999999 8999999999999997 999999999886 55 4776655442211
Q ss_pred C--Cc-CC---hHHHHHHHHHHHH---H--HHhhh-cCCcc-cccccceeecccccccccccccchhhhhhhcCCchhhh
Q 004695 330 I--NK-YD---IYDGRFRSAYCVQ---W--QGMDG-LKGPV-LSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLI 396 (736)
Q Consensus 330 ~--~~-~d---~~~~~~~~f~~~~---~--~g~d~-~~g~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (736)
. .. .. .+..+.. +++.. . ++... .+..+ .+|+++++||+++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~------------------------ 228 (439)
T TIGR03111 174 ELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETIL------------------------ 228 (439)
T ss_pred hhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHH------------------------
Confidence 0 00 00 1111111 12221 1 11112 23332 46778889999995
Q ss_pred hhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHH-cCCeEEEeCCCCCeeEe
Q 004695 397 NSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHC-KGWTSTYLTPFRPQFLG 475 (736)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~-~Gwrsvy~~~~~~~~~g 475 (736)
+.+||+.++++||++++++++. .|+++.|+++ +.++.
T Consensus 229 ----------------------------------------~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~ 266 (439)
T TIGR03111 229 ----------------------------------------KTQLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYV 266 (439)
T ss_pred ----------------------------------------HhCCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEE
Confidence 2468999999999999999975 6999999985 99999
Q ss_pred ecCCChHHHhhhhhhhccccccccccccCCcccCCCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCccc
Q 004695 476 TSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLY 553 (736)
Q Consensus 476 ~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~ 553 (736)
++|+|++++++||.||++|.+|++....++... ++.++.++..+....... ...+|.+++.++++++.++|.++.
T Consensus 267 ~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 267 DPIDGLNKLYTQRQRWQRGELEVSHMFFESANK--SIKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred ECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh--chhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999999999999643333332 345666666554444444 557788888888988888886544
No 18
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.9e-33 Score=314.61 Aligned_cols=230 Identities=21% Similarity=0.239 Sum_probs=183.2
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (736)
....|+|+|+||+ |||+ +.+++|+.|+++++||. ++|+|+|||++|.|.+.+.|.+
T Consensus 50 ~~~~p~vsViIp~---yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~------------------ 105 (420)
T PRK11204 50 LKEYPGVSILVPC---YNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLA------------------ 105 (420)
T ss_pred cCCCCCEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHH------------------
Confidence 4567999999999 9998 88999999999999995 8999999999997753322110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 004695 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
...|+
T Consensus 106 ---------------------------------------------------------------------------~~~~~ 110 (420)
T PRK11204 106 ---------------------------------------------------------------------------AQIPR 110 (420)
T ss_pred ---------------------------------------------------------------------------HhCCc
Confidence 01235
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCccccc
Q 004695 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (736)
Q Consensus 251 l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n 329 (736)
+.++.+++ ++|||+|+|.|++. +++|+++++|||.+++ ||+|++++..|. || +++.||+.....|
T Consensus 111 v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~----~v~~v~g~~~~~~ 176 (420)
T PRK11204 111 LRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNP----RVGAVTGNPRIRN 176 (420)
T ss_pred EEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CeEEEECCceecc
Confidence 67776554 46799999999999 8999999999999998 999999999884 55 6999999877765
Q ss_pred CCcCChHHHHH----HHHHHHHHHHhhhcCCcc-cccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhc
Q 004695 330 INKYDIYDGRF----RSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYK 404 (736)
Q Consensus 330 ~~~~d~~~~~~----~~f~~~~~~g~d~~~g~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~ 404 (736)
. +...+..+ ...+.....+....+... .+|+++++||+++.
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~-------------------------------- 222 (420)
T PRK11204 177 R--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALH-------------------------------- 222 (420)
T ss_pred c--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHH--------------------------------
Confidence 3 22222221 222233333333344443 36888999999994
Q ss_pred ccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHH
Q 004695 405 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDL 484 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~ 484 (736)
+.+||+++.++||+++++|++++||++.|+++ +.++++.|+|++++
T Consensus 223 --------------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~ 268 (420)
T PRK11204 223 --------------------------------EVGYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGL 268 (420)
T ss_pred --------------------------------HhCCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHH
Confidence 24679999999999999999999999999985 99999999999999
Q ss_pred hhhhhhhcccccccccc
Q 004695 485 LIQGTRWGSGLTDVGLS 501 (736)
Q Consensus 485 ~~Qr~RWa~G~~qi~~~ 501 (736)
++||.||++|++|.++.
T Consensus 269 ~~Qr~RW~~G~~~~l~~ 285 (420)
T PRK11204 269 WKQRLRWAQGGAEVLLK 285 (420)
T ss_pred HHHHHHHhcCHHHHHHH
Confidence 99999999999999875
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=5.6e-31 Score=298.60 Aligned_cols=262 Identities=17% Similarity=0.134 Sum_probs=184.6
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHH-HcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCccc
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSA-MALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~-~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (736)
....|+|+|+||+ |||+ +++.+||.++ .++|||+ ++|+|+||+++|.|.+.+.|.++
T Consensus 62 ~~~~p~vaIlIPA---~NE~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~~v~~l~~---------------- 119 (504)
T PRK14716 62 SVPEKRIAIFVPA---WREA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLREVDRLAA---------------- 119 (504)
T ss_pred cCCCCceEEEEec---cCch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHHHHHHHHH----------------
Confidence 3458999999999 9999 8999999996 4789974 99999999999988654333210
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCC
Q 004695 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p 249 (736)
++|
T Consensus 120 -----------------------------------------------------------------------------~~p 122 (504)
T PRK14716 120 -----------------------------------------------------------------------------RYP 122 (504)
T ss_pred -----------------------------------------------------------------------------HCC
Confidence 113
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcC--CCCCC---CEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccC
Q 004695 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 324 (736)
Q Consensus 250 ~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~--~~s~g---~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~P 324 (736)
+++.+. .+++| ..+||+|||.+++..- ...+| |+|+++|||.+++ |++|+....++.| .++||.|
T Consensus 123 ~v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~------~~~VQ~p 192 (504)
T PRK14716 123 RVHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPR------HDFVQLP 192 (504)
T ss_pred CeEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCC------CCEEecc
Confidence 333222 12222 3689999999997621 00244 9999999999998 9999876655533 4689999
Q ss_pred cccccCCcCCh----HHHHHHHHHHHHHHHhhhcCCcc-cccccceeecccccccccccccchhhhhhhcCCchhhhhhh
Q 004695 325 QKFHNINKYDI----YDGRFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSL 399 (736)
Q Consensus 325 q~f~n~~~~d~----~~~~~~~f~~~~~~g~d~~~g~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~ 399 (736)
....+.+.+.. |..++...+...+..++.+++++ ++|+|+++||++|+.
T Consensus 193 v~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~-------------------------- 246 (504)
T PRK14716 193 VFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALER-------------------------- 246 (504)
T ss_pred eeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHH--------------------------
Confidence 87665332222 22222222333456678888774 689999999999952
Q ss_pred hhhhcccCCCCCCchhhhHhhhcccccccccccccccccc-cccCCCccchHHHHHHHHHcCCeEEEeCCCCC-------
Q 004695 400 HQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV-GILYQSVSEDLFTGFILHCKGWTSTYLTPFRP------- 471 (736)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~-G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~------- 471 (736)
+.++ ..+ +|+++++|||+++|++++.+|||++|++. +
T Consensus 247 -----------------l~~~----------------~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~--ai~~~~~~ 291 (504)
T PRK14716 247 -----------------LAAE----------------RGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRV--RADDTTDR 291 (504)
T ss_pred -----------------HHhh----------------cCCCCCCCCCcchHHHHHHHHHHCCCEEEEecc--cccccccc
Confidence 0000 012 39999999999999999999999999985 4
Q ss_pred --------eeEeecCCChHHHhhhhhhhcccc-ccccccc-c-CCcccCCCCCChhhHHHHhhH
Q 004695 472 --------QFLGTSTTNLNDLLIQGTRWGSGL-TDVGLSR-F-CPLLYGPSRMSLLQSMCYGEL 524 (736)
Q Consensus 472 --------~~~g~aP~tl~~~~~Qr~RWa~G~-~qi~~~~-~-~pl~~~~~~L~~~qrl~y~~~ 524 (736)
..++++|+|++++++||.||+.|. +|..... . .++. .+.+.+++|..-+..
T Consensus 292 ~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~ 353 (504)
T PRK14716 292 PDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTN 353 (504)
T ss_pred cccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHH
Confidence 345889999999999999999995 7876421 1 1111 234667888776654
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=1.7e-30 Score=266.83 Aligned_cols=227 Identities=24% Similarity=0.324 Sum_probs=176.3
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+ +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+..+
T Consensus 1 p~vSViIp~---yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPV---FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEec---CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 689999999 9998 899999999999999998999999998 88888754433210
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 004695 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
.+.+ .-++++++
T Consensus 55 -------------------------~~~~-------------------------------------------~~~~i~~~ 66 (232)
T cd06437 55 -------------------------EYAA-------------------------------------------QGVNIKHV 66 (232)
T ss_pred -------------------------HHhh-------------------------------------------cCCceEEE
Confidence 0100 01246777
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCC
Q 004695 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (736)
Q Consensus 255 ~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
.+.++ +++|++|+|.|++. ++||+|+++|||+++. |++|+++..++.|| ++++||++..+.|.+. .
T Consensus 67 ~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~-~ 132 (232)
T cd06437 67 RRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADP----KLGFVQTRWGHINANY-S 132 (232)
T ss_pred ECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCC----CeEEEecceeeEcCCC-c
Confidence 66554 46799999999999 8999999999999997 99999988888766 5999998776655321 1
Q ss_pred hHHH----HHHHHHHHHHHHhhhcCCc-ccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCC
Q 004695 335 IYDG----RFRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNAN 409 (736)
Q Consensus 335 ~~~~----~~~~f~~~~~~g~d~~~g~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~ 409 (736)
.+.. ....++.....+....+.. ..+|+++++||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------- 175 (232)
T cd06437 133 LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIE------------------------------------- 175 (232)
T ss_pred hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHH-------------------------------------
Confidence 1111 1112344444444443433 358999999999994
Q ss_pred CCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhh
Q 004695 410 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~ 489 (736)
+.+||+..+..||+++++|++.+||+++|+++ +.+++..|+|++++++||.
T Consensus 176 ---------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~ 226 (232)
T cd06437 176 ---------------------------DAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQH 226 (232)
T ss_pred ---------------------------HhCCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHH
Confidence 24579888899999999999999999999985 9999999999999999999
Q ss_pred hhcccc
Q 004695 490 RWGSGL 495 (736)
Q Consensus 490 RWa~G~ 495 (736)
||++|.
T Consensus 227 rW~~g~ 232 (232)
T cd06437 227 RWSKGP 232 (232)
T ss_pred HhccCC
Confidence 999984
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=3.1e-30 Score=263.15 Aligned_cols=230 Identities=35% Similarity=0.489 Sum_probs=186.5
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+
T Consensus 1 p~vsviip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------------ 53 (234)
T cd06421 1 PTVDVFIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAE------------------------ 53 (234)
T ss_pred CceEEEEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHH------------------------
Confidence 789999999 99987899999999999999998899999999999865432111
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 004695 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
+..+ ..+.++
T Consensus 54 -----------------------------~~~~-----------------------------------------~~~~~~ 63 (234)
T cd06421 54 -----------------------------LGVE-----------------------------------------YGYRYL 63 (234)
T ss_pred -----------------------------hhcc-----------------------------------------cCceEE
Confidence 0000 024555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCC
Q 004695 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (736)
Q Consensus 255 ~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
.++++ .++|+||+|.|++. +++|||+++|+|.+++ |++|.+++..+.+ +++++.|++++.+.+.+..+
T Consensus 64 ~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~~ 131 (234)
T cd06421 64 TRPDN----RHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLD---DPKVALVQTPQFFYNPDPFD 131 (234)
T ss_pred EeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhc---CCCeEEEecceEEecCCcch
Confidence 55543 57899999999999 8999999999999997 9999999999875 13699999999887654321
Q ss_pred ----hHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCC
Q 004695 335 ----IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANG 410 (736)
Q Consensus 335 ----~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~ 410 (736)
.+......++..+..+....+...++|+++++||+++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~-------------------------------------- 173 (234)
T cd06421 132 WLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALD-------------------------------------- 173 (234)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHH--------------------------------------
Confidence 22333445556666666666677789999999999994
Q ss_pred CCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhh
Q 004695 411 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
+.+||+...+.||++++++++.+||+++|+++ +.+.+..|+++.++++||.|
T Consensus 174 --------------------------~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~r 225 (234)
T cd06421 174 --------------------------EIGGFPTDSVTEDLATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRLR 225 (234)
T ss_pred --------------------------HhCCCCccceeccHHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHHHH
Confidence 24568888889999999999999999999986 88999999999999999999
Q ss_pred hcccccccc
Q 004695 491 WGSGLTDVG 499 (736)
Q Consensus 491 Wa~G~~qi~ 499 (736)
|..|++|++
T Consensus 226 w~~~~~~~~ 234 (234)
T cd06421 226 WARGMLQIL 234 (234)
T ss_pred HhcCCeeeC
Confidence 999999864
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=2.6e-28 Score=287.00 Aligned_cols=237 Identities=19% Similarity=0.200 Sum_probs=173.3
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCccc
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (736)
.++.|+|+|+||+ |||+ .++.+|+.+++ ++|||+ ++|+|+||++++.|.+++.+.+ ++
T Consensus 59 ~~~~~~vsIlVPa---~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~----------~~----- 117 (727)
T PRK11234 59 KPDEKPLAIMVPA---WNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC----------AR----- 117 (727)
T ss_pred cCCCCCEEEEEec---Ccch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH----------HH-----
Confidence 4567999999999 9999 89999999987 799997 9999999888776654332221 11
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCC
Q 004695 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p 249 (736)
+|
T Consensus 118 ------------------------------------------------------------------------------~p 119 (727)
T PRK11234 118 ------------------------------------------------------------------------------FP 119 (727)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 12
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCC-----CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccC
Q 004695 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 324 (736)
Q Consensus 250 ~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~-----s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~P 324 (736)
++..+.-+ ++| .++||+|||+++...-.. ...++++++|||.++. |++|+ .+.++.++ . ++||.|
T Consensus 120 ~~~~v~~~-~~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~-~~~~l~~~----~-~~VQ~p 189 (727)
T PRK11234 120 NVHKVVCA-RPG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELR-LFNYLVER----K-DLIQIP 189 (727)
T ss_pred CcEEEEeC-CCC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHH-HHHhhcCC----C-CeEeec
Confidence 33222211 233 468999999999873100 1346788899999998 99997 67777765 3 899999
Q ss_pred cccccCCcCChHH----HHHHHHHHHHHHHhhhcCCc-ccccccceeeccc---ccccccccccchhhhhhhcCCchhhh
Q 004695 325 QKFHNINKYDIYD----GRFRSAYCVQWQGMDGLKGP-VLSGTGYYIKRES---LYADFTHTVNDISELKDTFGKSNVLI 396 (736)
Q Consensus 325 q~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~g~-~~~Gtg~~~RR~a---L~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (736)
....+.+.+...+ .++...+...+++++.++++ .+.|+|++|.|++ |.
T Consensus 190 ~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~------------------------ 245 (727)
T PRK11234 190 VYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALL------------------------ 245 (727)
T ss_pred ccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHH------------------------
Confidence 7644322222222 33333444667888998777 4689999995554 42
Q ss_pred hhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccc---cccCCCccchHHHHHHHHHcCCeEEEeCC-----
Q 004695 397 NSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV---GILYQSVSEDLFTGFILHCKGWTSTYLTP----- 468 (736)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~---G~~~~sltED~~t~~rl~~~Gwrsvy~~~----- 468 (736)
+.+ ||+.+++|||+++|++|+.+||+++|++.
T Consensus 246 ----------------------------------------~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~ 285 (727)
T PRK11234 246 ----------------------------------------EDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDE 285 (727)
T ss_pred ----------------------------------------HhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccc
Confidence 122 59999999999999999999999999981
Q ss_pred ----------------CCCeeEeecCCChHHHhhhhhhhccc-cccccc
Q 004695 469 ----------------FRPQFLGTSTTNLNDLLIQGTRWGSG-LTDVGL 500 (736)
Q Consensus 469 ----------------~~~~~~g~aP~tl~~~~~Qr~RWa~G-~~qi~~ 500 (736)
+...+++..|+|+++.++||.||..| .+|.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 286 AKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 01347889999999999999999999 577653
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.97 E-value=2.1e-29 Score=260.83 Aligned_cols=232 Identities=23% Similarity=0.276 Sum_probs=179.4
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (736)
|.|+|+||+ |||+ +.+.+|+.|+++++||.++++|+|+|||++|.|.+.+.+..
T Consensus 1 p~vsIiIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~---------------------- 54 (241)
T cd06427 1 PVYTILVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR---------------------- 54 (241)
T ss_pred CeEEEEEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc----------------------
Confidence 789999999 9999 89999999999999998889999999999997754221110
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 004695 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
. + ...+++++
T Consensus 55 ----------------------------~--------------------~----------------------~~~~i~~~ 64 (241)
T cd06427 55 ----------------------------L--------------------P----------------------SIFRVVVV 64 (241)
T ss_pred ----------------------------c--------------------C----------------------CCeeEEEe
Confidence 0 0 00124444
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCC
Q 004695 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (736)
Q Consensus 255 ~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
...+ ..||++|+|.|++. ++||+|+++|+|.+++ |+++.+++.+|.+. ++++++||++..+.|...+-
T Consensus 65 ~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~ 132 (241)
T cd06427 65 PPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPLNYYNARENW 132 (241)
T ss_pred cCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCccH
Confidence 3222 46899999999999 8999999999999998 99999999988631 23799999988777642111
Q ss_pred ---hHHHHHHHHHHHHHHHhhhcCCcc-cccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCC
Q 004695 335 ---IYDGRFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANG 410 (736)
Q Consensus 335 ---~~~~~~~~f~~~~~~g~d~~~g~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~ 410 (736)
.+..+....++...++....+... ++|+++++||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~-------------------------------------- 174 (241)
T cd06427 133 LTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLR-------------------------------------- 174 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHH--------------------------------------
Confidence 111122233455556666555554 46888899999995
Q ss_pred CCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhh
Q 004695 411 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
+.+||+....+||++.++|++.+||++.+++ ....+..|+|++++++||.|
T Consensus 175 --------------------------~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~---~~~~~~~~~~~~~~~~q~~R 225 (241)
T cd06427 175 --------------------------ELGGWDPFNVTEDADLGLRLARAGYRTGVLN---STTLEEANNALGNWIRQRSR 225 (241)
T ss_pred --------------------------HcCCCCcccchhhHHHHHHHHHCCceEEEec---ccccccCcHhHHHHHHHHHH
Confidence 2457887788999999999999999999996 34678999999999999999
Q ss_pred hcccccccccc
Q 004695 491 WGSGLTDVGLS 501 (736)
Q Consensus 491 Wa~G~~qi~~~ 501 (736)
|+.|.+|++..
T Consensus 226 w~~g~~~~~~~ 236 (241)
T cd06427 226 WIKGYMQTWLV 236 (241)
T ss_pred HhccHHHHHHH
Confidence 99999999863
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=2.4e-28 Score=250.77 Aligned_cols=230 Identities=23% Similarity=0.307 Sum_probs=172.6
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004695 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||+ |||+++.+.+++.|+.+++||. .+|+|+|||++|.|.....+. +|++++
T Consensus 1 siiip~---~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~---------~~~~~~----------- 55 (236)
T cd06435 1 SIHVPC---YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEA---------HCAQLG----------- 55 (236)
T ss_pred CeeEee---CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHH---------HHHHhC-----------
Confidence 589999 9999889999999999999996 899999999999764211110 000000
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 004695 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Re 257 (736)
+++.++..+
T Consensus 56 -----------------------------------------------------------------------~~i~~i~~~ 64 (236)
T cd06435 56 -----------------------------------------------------------------------ERFRFFHVE 64 (236)
T ss_pred -----------------------------------------------------------------------CcEEEEEcC
Confidence 135566554
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHH
Q 004695 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (736)
Q Consensus 258 krp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (736)
++ .++|+||+|.|++.+. .++|+|+++|+|.+++ |++|.+++..|.++ +++.|++++.+.+. ...++.
T Consensus 65 ~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~~-~~~~~~ 132 (236)
T cd06435 65 PL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDP----RVGFVQAPQDYRDG-EESLFK 132 (236)
T ss_pred CC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCC----CeeEEecCccccCC-CccHHH
Confidence 43 4679999999999842 3589999999999998 99999999998765 69999988765542 122332
Q ss_pred HHH----HHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCc
Q 004695 338 GRF----RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENF 413 (736)
Q Consensus 338 ~~~----~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
... ..++..........+...+.|+++++||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------------- 171 (236)
T cd06435 133 RMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALD----------------------------------------- 171 (236)
T ss_pred HHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHH-----------------------------------------
Confidence 111 11122212222333344567888999999994
Q ss_pred hhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhcc
Q 004695 414 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 493 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~ 493 (736)
+.+||+.....||+++++|++.+||+..|+++ +..+...|+|+.++.+||.||+.
T Consensus 172 -----------------------~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~ 226 (236)
T cd06435 172 -----------------------DVGGWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAY 226 (236)
T ss_pred -----------------------HhCCCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhc
Confidence 24578888889999999999999999999985 78899999999999999999999
Q ss_pred cccccccc
Q 004695 494 GLTDVGLS 501 (736)
Q Consensus 494 G~~qi~~~ 501 (736)
|++|++..
T Consensus 227 g~~~~~~~ 234 (236)
T cd06435 227 GAVQILKK 234 (236)
T ss_pred chhhhhhc
Confidence 99999863
No 25
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=2.5e-26 Score=253.87 Aligned_cols=227 Identities=15% Similarity=0.168 Sum_probs=167.6
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (736)
...|+|+|+||+ |||+ +.+++|+.|++++|||. +||+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~---~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPL---HGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEEC---CCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 347999999999 9999 67999999999999997 9999999999997654222110
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 004695 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
+. ||. .++
T Consensus 93 ---------------------------~~----------------------~p~-----------------------~~i 100 (373)
T TIGR03472 93 ---------------------------AD----------------------FPD-----------------------ADI 100 (373)
T ss_pred ---------------------------Hh----------------------CCC-----------------------Cce
Confidence 00 111 125
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCC
Q 004695 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (736)
Q Consensus 252 ~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~ 331 (736)
.++..+++.| .++|++|+|++++. +++|+++++|||.+++ ||+|++++..|.|| +++.|+++....+
T Consensus 101 ~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~----~v~~V~~~~~~~~-- 167 (373)
T TIGR03472 101 DLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADP----DVGLVTCLYRGRP-- 167 (373)
T ss_pred EEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCC----CcceEeccccCCC--
Confidence 5664444433 45799999999998 8999999999999998 99999999999877 5899988643222
Q ss_pred cCChHHHHHH-H-----HHHHHHHHhhhcCC-cccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhc
Q 004695 332 KYDIYDGRFR-S-----AYCVQWQGMDGLKG-PVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYK 404 (736)
Q Consensus 332 ~~d~~~~~~~-~-----f~~~~~~g~d~~~g-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~ 404 (736)
.+. +.+... . |+...... +..+. .++.|++.++||++++
T Consensus 168 ~~~-~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~-------------------------------- 213 (373)
T TIGR03472 168 VPG-FWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLE-------------------------------- 213 (373)
T ss_pred CCC-HHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHH--------------------------------
Confidence 122 222211 1 11111111 12232 3467888999999995
Q ss_pred ccCCCCCCchhhhHhhhcccccccccccccccccccccC--CCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChH
Q 004695 405 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLN 482 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~ 482 (736)
+.+||+. ++++||++++.++.++||++.|++. +......|+|++
T Consensus 214 --------------------------------~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~ 259 (373)
T TIGR03472 214 --------------------------------AIGGLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFA 259 (373)
T ss_pred --------------------------------HcCChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHH
Confidence 2457774 5789999999999999999999874 777888899999
Q ss_pred HHhhhhhhhccccc
Q 004695 483 DLLIQGTRWGSGLT 496 (736)
Q Consensus 483 ~~~~Qr~RWa~G~~ 496 (736)
++++||.||++...
T Consensus 260 ~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 260 TLLAHELRWSRTIR 273 (373)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999986554
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=6.1e-29 Score=253.53 Aligned_cols=224 Identities=26% Similarity=0.304 Sum_probs=144.2
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+ +.+.++|.|+++++||. ++|+|+||++++.|.+.+.+.++ ++
T Consensus 1 P~v~Vvip~---~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~----------~~--------- 55 (228)
T PF13641_consen 1 PRVSVVIPA---YNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAA----------RY--------- 55 (228)
T ss_dssp --EEEE--B---SS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHH----------TT---------
T ss_pred CEEEEEEEe---cCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHH----------Hc---------
Confidence 789999999 9999 69999999999999965 99999999999876543322110 00
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 004695 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
|. -.+.++
T Consensus 56 -------------------------------------------------~~-----------------------~~v~vi 63 (228)
T PF13641_consen 56 -------------------------------------------------PR-----------------------VRVRVI 63 (228)
T ss_dssp -------------------------------------------------GG------------------------GEEEE
T ss_pred -------------------------------------------------CC-----------------------CceEEe
Confidence 00 025677
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCC
Q 004695 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (736)
Q Consensus 255 ~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
.+++++| .++|++|+|.+++. .++|+|+++|+|.+++ |++|++++.+|.+| ++++||++..+.+. ..
T Consensus 64 ~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~----~~~~v~~~~~~~~~--~~ 130 (228)
T PF13641_consen 64 RRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVLD-PDWLERLLAAFADP----GVGAVGGPVFPDND--RN 130 (228)
T ss_dssp E----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBS----S--EEEEEEEETTC--CC
T ss_pred ecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEEC-HHHHHHHHHHHHhC----CCCeEeeeEeecCC--CC
Confidence 6655432 24799999999999 8899999999999997 99999999999766 59999988866542 21
Q ss_pred hHHHHHHHHH----HHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCC
Q 004695 335 IYDGRFRSAY----CVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANG 410 (736)
Q Consensus 335 ~~~~~~~~f~----~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~ 410 (736)
.+......++ .....+....+...++|+++++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~-------------------------------------- 172 (228)
T PF13641_consen 131 WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE-------------------------------------- 172 (228)
T ss_dssp EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH--------------------------------------
T ss_pred HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH--------------------------------------
Confidence 1111111111 1112233444555678999999999994
Q ss_pred CCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhh
Q 004695 411 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
+.+||++....||.++++++.++||++.|++. +.++...|.|++++++||.|
T Consensus 173 --------------------------~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~R 224 (228)
T PF13641_consen 173 --------------------------EVGGFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFR 224 (228)
T ss_dssp --------------------------HH-S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHH
T ss_pred --------------------------HhCCCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhc
Confidence 24578888889999999999999999999985 88999999999999999999
Q ss_pred hccc
Q 004695 491 WGSG 494 (736)
Q Consensus 491 Wa~G 494 (736)
|+.|
T Consensus 225 W~~g 228 (228)
T PF13641_consen 225 WSRG 228 (228)
T ss_dssp HH--
T ss_pred cCcC
Confidence 9987
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.94 E-value=8.4e-27 Score=242.74 Aligned_cols=171 Identities=18% Similarity=0.055 Sum_probs=115.7
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCcCChHHHHHHHHH---H
Q 004695 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAY---C 345 (736)
Q Consensus 270 aLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~---~ 345 (736)
++|.++.. +++|||+++|||.+++ |++|++++.+| .|| ++|.|++.+...|.. ......-+..-| .
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDP----EIGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCC----CEEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 45666666 7999999999999998 99999999988 466 699999988776632 122222111111 1
Q ss_pred H-HHHHhhhcCCc-ccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhHhhhcc
Q 004695 346 V-QWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 423 (736)
Q Consensus 346 ~-~~~g~d~~~g~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (736)
. ...+....+.. ...|++++||+++|.+.+... . .
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~--------------~-----------------------------~ 170 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGK--------------G-----------------------------P 170 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCcccc--------------c-----------------------------c
Confidence 1 11223334443 457889999999996410000 0 0
Q ss_pred cccccccccccccccc-cccCCCccchHHHHHHHHHcCCeEEE--eCCCCCeeEeecCCChHHHhhhhhhhcccccc
Q 004695 424 LASCSYEHQTKWGEEV-GILYQSVSEDLFTGFILHCKGWTSTY--LTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTD 497 (736)
Q Consensus 424 v~~c~ye~~t~~g~~~-G~~~~sltED~~t~~rl~~~Gwrsvy--~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q 497 (736)
.+.+.|...+. +.+ +....+++||.+++++|..+||++.| +++ +.+++++|+|++++++||.||++|++.
T Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 171 LLDYAYLTNTV--DSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred chhhccccCcc--cchHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 00000111110 111 23445789999999999999999999 875 999999999999999999999999874
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.94 E-value=7.5e-24 Score=246.76 Aligned_cols=236 Identities=18% Similarity=0.187 Sum_probs=170.8
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEE---EcCCCCccchhhHHHHHHhhhcchhhhhhcC
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYL---SDDGGSPITLHGMREACRFAKWWLPFCRRYG 166 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~v~v---~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~ 166 (736)
..+.|.|+|+||+ |||+ +++.+||.+++ ++|||+ ++|+| .||+. |.+++.+.+
T Consensus 67 ~~~~~~vsIlVPa---~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~---T~~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPA---WKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAE---TITEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeC---CCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCcc---HHHHHHHHh--------------
Confidence 4567999999999 9999 99999999986 889996 89999 46663 433221110
Q ss_pred cccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhcccc
Q 004695 167 IKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLV 246 (736)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~ 246 (736)
.
T Consensus 124 -------------------------------------------------------------------------------~ 124 (703)
T PRK15489 124 -------------------------------------------------------------------------------R 124 (703)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CCCcEEEEeccCCCCCCCCChHHHHHHHHHhc---CCCCCCCE--EEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEE
Q 004695 247 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVS---GVISNSPY--ILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 321 (736)
Q Consensus 247 ~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s---~~~s~g~~--Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~V 321 (736)
.+|++..+..+. + ...+||.|||.++... .....++| |+++|||.+|+ |++|+.. .++.+. -.+|
T Consensus 125 ~~p~~~~v~~~~-~--gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~-P~~L~~~-~~~~~~-----~~~i 194 (703)
T PRK15489 125 RYKRLVRVEVPH-D--GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLH-PLELKYF-NYLLPR-----KDLV 194 (703)
T ss_pred cCCcEEEEEcCC-C--CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCC-hhHHHHH-HhhcCC-----ccee
Confidence 124455444332 1 2478999999999862 00113444 99999999998 9999764 666533 1469
Q ss_pred ccCcccccCCcC----ChHHHHHHHHHHHHHHHhhhcCCcc-cccccceeecccccccccccccchhhhhhhcCCchhhh
Q 004695 322 QFPQKFHNINKY----DIYDGRFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLI 396 (736)
Q Consensus 322 Q~Pq~f~n~~~~----d~~~~~~~~f~~~~~~g~d~~~g~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (736)
|.|-.-...+.. ..|..|....++..+.++...++++ ..|+|++|||++|..
T Consensus 195 Q~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~----------------------- 251 (703)
T PRK15489 195 QLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA----------------------- 251 (703)
T ss_pred eeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH-----------------------
Confidence 987432211122 2355666777888889999998886 589999999999841
Q ss_pred hhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccc---cccCCCccchHHHHHHHHHcCCeEEEeCC-----
Q 004695 397 NSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV---GILYQSVSEDLFTGFILHCKGWTSTYLTP----- 468 (736)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~---G~~~~sltED~~t~~rl~~~Gwrsvy~~~----- 468 (736)
+. +++ +|+.+|+|||+++|+||+++|||+.|+.-
T Consensus 252 --------------------l~------------------~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~ 293 (703)
T PRK15489 252 --------------------LM------------------KERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFR 293 (703)
T ss_pred --------------------HH------------------HhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEecccc
Confidence 00 133 58889999999999999999999999311
Q ss_pred ----------------CCCeeEeecCCChHHHhhhhhhhccccc-ccc
Q 004695 469 ----------------FRPQFLGTSTTNLNDLLIQGTRWGSGLT-DVG 499 (736)
Q Consensus 469 ----------------~~~~~~g~aP~tl~~~~~Qr~RWa~G~~-qi~ 499 (736)
.....++..|.|+++.++||.||-.|-. |-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 294 VRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred ccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1266778899999999999999999988 654
No 29
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.93 E-value=2.1e-25 Score=223.71 Aligned_cols=193 Identities=15% Similarity=0.176 Sum_probs=153.8
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (736)
|.|+|+||+ |||+ ..+.++|.|+++++||. ++|+|+|||++|.|.+.+.+..+ +
T Consensus 1 p~vsviip~---~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPL---CGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEec---CCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 789999999 9999 56899999999999997 99999999999977543322110 0
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 004695 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
||.+ .+.++
T Consensus 55 ------------------------------------------------~~~~-----------------------~~~~~ 63 (196)
T cd02520 55 ------------------------------------------------YPNV-----------------------DARLL 63 (196)
T ss_pred ------------------------------------------------CCCC-----------------------cEEEE
Confidence 0000 13344
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCC
Q 004695 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (736)
Q Consensus 255 ~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d 334 (736)
..+++.| ..+|++|+|.|++. ++||+++++|+|..++ |++|++++..+.+| ++++|++.
T Consensus 64 ~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~---------- 122 (196)
T cd02520 64 IGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDP----GVGLVTCL---------- 122 (196)
T ss_pred ecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCC----CCCeEEee----------
Confidence 4433322 34799999999999 8999999999999987 99999999988766 47777653
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCch
Q 004695 335 IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFS 414 (736)
Q Consensus 335 ~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~ 414 (736)
+..|+++++||+++.
T Consensus 123 -----------------------~~~g~~~~~r~~~~~------------------------------------------ 137 (196)
T cd02520 123 -----------------------CAFGKSMALRREVLD------------------------------------------ 137 (196)
T ss_pred -----------------------cccCceeeeEHHHHH------------------------------------------
Confidence 457889999999994
Q ss_pred hhhHhhhcccccccccccccccccccccC--CCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhc
Q 004695 415 NVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWG 492 (736)
Q Consensus 415 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa 492 (736)
+.+||+. ..+.||++.++++..+||++.|+++ +.++...|++++++++||.||+
T Consensus 138 ----------------------~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~ 193 (196)
T cd02520 138 ----------------------AIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWS 193 (196)
T ss_pred ----------------------hccChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHh
Confidence 1346654 3568999999999999999999985 8899999999999999999998
Q ss_pred cc
Q 004695 493 SG 494 (736)
Q Consensus 493 ~G 494 (736)
+.
T Consensus 194 ~~ 195 (196)
T cd02520 194 RT 195 (196)
T ss_pred cc
Confidence 64
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.93 E-value=1.6e-24 Score=219.69 Aligned_cols=221 Identities=21% Similarity=0.218 Sum_probs=163.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+++||.|++.++||.++++|+|+|||++|.|.+.+.+..
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~-------------------------- 50 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAA-------------------------- 50 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHH--------------------------
Confidence 68999 9998 89999999999999999899999999999997754221000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
....+++.++.++.
T Consensus 51 ------------------------------------------------------------------~~~~~~v~~~~~~~ 64 (229)
T cd04192 51 ------------------------------------------------------------------AKPNFQLKILNNSR 64 (229)
T ss_pred ------------------------------------------------------------------hCCCcceEEeeccC
Confidence 00112455665442
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHH
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (736)
+ ...+|+.++|.+++. +++|+|+++|+|.++. |++|++++..+.++ ..+.|+++..+.. .+.+..
T Consensus 65 -~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~---~~~~~~ 129 (229)
T cd04192 65 -V--SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKE----QIGLVAGPVIYFK---GKSLLA 129 (229)
T ss_pred -c--ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcC----CCcEEeeeeeecC---CccHHH
Confidence 1 257999999999999 8899999999999998 99999999977654 3667777776552 122211
Q ss_pred HHH---H-HHHHHHHHhhhcCCc-ccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCc
Q 004695 339 RFR---S-AYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENF 413 (736)
Q Consensus 339 ~~~---~-f~~~~~~g~d~~~g~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
... . +......+....+.+ .++|++.++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------------- 168 (229)
T cd04192 130 KFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFF----------------------------------------- 168 (229)
T ss_pred HHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHH-----------------------------------------
Confidence 111 1 111122223334444 457888899999995
Q ss_pred hhhhHhhhcccccccccccccccccccccC--CCccchHHHHHHHHHcCC-eEEEeCCCCCeeEeecCCChHHHhhhhhh
Q 004695 414 SNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGW-TSTYLTPFRPQFLGTSTTNLNDLLIQGTR 490 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~sltED~~t~~rl~~~Gw-rsvy~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
+.+||++ ...+||.+..+++.++|| ++.|++......+...|++++++++||+|
T Consensus 169 -----------------------~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~R 225 (229)
T cd04192 169 -----------------------EVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKR 225 (229)
T ss_pred -----------------------HhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHH
Confidence 2457874 467899999999999999 99988643578889999999999999999
Q ss_pred hccc
Q 004695 491 WGSG 494 (736)
Q Consensus 491 Wa~G 494 (736)
|++|
T Consensus 226 w~~g 229 (229)
T cd04192 226 WASK 229 (229)
T ss_pred hhcC
Confidence 9988
No 31
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.92 E-value=2.5e-24 Score=222.94 Aligned_cols=226 Identities=18% Similarity=0.202 Sum_probs=166.5
Q ss_pred CCCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCccc
Q 004695 90 EDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (736)
Q Consensus 90 ~~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (736)
..+..|+++|+||+ |||+ ..+.+++.++.+++||.++++|+|+|||++|.|.+.+.+
T Consensus 24 ~~~~~~~isVvip~---~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------- 80 (251)
T cd06439 24 DPAYLPTVTIIIPA---YNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE------------------- 80 (251)
T ss_pred CCCCCCEEEEEEec---CCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH-------------------
Confidence 35668999999999 9998 889999999999999988899999999999976432111
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCC
Q 004695 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p 249 (736)
+.+ .
T Consensus 81 -------------------------------~~~-------------------------------------------~-- 84 (251)
T cd06439 81 -------------------------------YAD-------------------------------------------K-- 84 (251)
T ss_pred -------------------------------Hhh-------------------------------------------C--
Confidence 100 0
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCccccc
Q 004695 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 329 (736)
Q Consensus 250 ~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n 329 (736)
++.++..++ +.+|++|+|.+++. +++|+|+++|+|.+++ |+++++++..+.++ ++++|++.....+
T Consensus 85 ~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~ 150 (251)
T cd06439 85 GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADP----SVGAVSGELVIVD 150 (251)
T ss_pred cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCC----CccEEEeEEEecC
Confidence 144554433 46899999999999 8899999999999998 99999999998765 5888887766554
Q ss_pred CCcCChHHHH-HHHHHHHHHHHhhhcCCc-ccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccC
Q 004695 330 INKYDIYDGR-FRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNN 407 (736)
Q Consensus 330 ~~~~d~~~~~-~~~f~~~~~~g~d~~~g~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~ 407 (736)
.+. ...... ...+...........+.. ...|++.++||+++.
T Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------- 194 (251)
T cd06439 151 GGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR----------------------------------- 194 (251)
T ss_pred Ccc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc-----------------------------------
Confidence 321 111111 111111111111122222 234444457787662
Q ss_pred CCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhh
Q 004695 408 ANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQ 487 (736)
Q Consensus 408 ~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Q 487 (736)
||+.....||.+++.++..+||++.|+++ +..+...|.+.+++++|
T Consensus 195 --------------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~ 240 (251)
T cd06439 195 --------------------------------PLPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEFRR 240 (251)
T ss_pred --------------------------------CCCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHHHH
Confidence 44555678999999999999999999985 88999999999999999
Q ss_pred hhhhccccccc
Q 004695 488 GTRWGSGLTDV 498 (736)
Q Consensus 488 r~RWa~G~~qi 498 (736)
+.||+.|++|.
T Consensus 241 ~~r~~~g~~~~ 251 (251)
T cd06439 241 RVRIAAGNLQA 251 (251)
T ss_pred HHHHHhccccC
Confidence 99999999983
No 32
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.92 E-value=6.5e-24 Score=217.21 Aligned_cols=229 Identities=17% Similarity=0.121 Sum_probs=162.9
Q ss_pred cEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccc
Q 004695 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (736)
Q Consensus 96 ~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (736)
+|+|+||| |||+++.+.+|+.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~---~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPV---YDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEee---cCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 48999999 9999889999999999999 4 6899999999996543221100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEe
Q 004695 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS 255 (736)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~ 255 (736)
..+.+.++.
T Consensus 51 -----------------------------------------------------------------------~~~~~~v~~ 59 (235)
T cd06434 51 -----------------------------------------------------------------------KYGGIFVIT 59 (235)
T ss_pred -----------------------------------------------------------------------cCCcEEEEe
Confidence 001234443
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCCh
Q 004695 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 335 (736)
Q Consensus 256 Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (736)
++ +++|++|+|.|++. +++|+|+++|+|.++. |++|++++..|.|| +++.|++.+...+.+ ...
T Consensus 60 -~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~-~~~ 123 (235)
T cd06434 60 -VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDP----KVGGVGTNQRILRPR-DSK 123 (235)
T ss_pred -cC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCC----CEeEEcCceEeecCc-ccH
Confidence 22 57899999999999 8999999999999998 99999999998766 699999988777642 122
Q ss_pred HHHHHHHHHHH----HHHHhhhcCCc-ccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCC
Q 004695 336 YDGRFRSAYCV----QWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANG 410 (736)
Q Consensus 336 ~~~~~~~f~~~----~~~g~d~~~g~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~ 410 (736)
+......++.. ........++. .+.|...++||+++...... ..|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~---------------~~~--------------- 173 (235)
T cd06434 124 WSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFL---------------EEF--------------- 173 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhH---------------HHh---------------
Confidence 22111112221 11222233333 24567778999999531000 000
Q ss_pred CCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhh
Q 004695 411 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTR 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~R 490 (736)
.+ +.++.......||.+++.+++++||+..|++. +.++...|+++.++++||.|
T Consensus 174 -------~~-----------------~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~R 227 (235)
T cd06434 174 -------TN-----------------ETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKFLKQQLR 227 (235)
T ss_pred -------hh-----------------hhhcCCCCCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHHHHHhhh
Confidence 00 01221224678999999999999999999985 88888899999999999999
Q ss_pred hcccccc
Q 004695 491 WGSGLTD 497 (736)
Q Consensus 491 Wa~G~~q 497 (736)
|++|..+
T Consensus 228 w~~~~~~ 234 (235)
T cd06434 228 WSRSNWR 234 (235)
T ss_pred hhhcccC
Confidence 9999864
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.91 E-value=6.2e-22 Score=219.79 Aligned_cols=230 Identities=20% Similarity=0.136 Sum_probs=157.4
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (736)
++..|+|+|+||+ |||+ +.+.+++.|+++++||. +++|+|+|||++|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa---~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPA---RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEec---CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 4578999999999 9999 89999999999999995 499999999999987643322110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 004695 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
. +| .-++
T Consensus 94 -----------------------------~----------------------~~----------------------~~~~ 100 (384)
T TIGR03469 94 -----------------------------A----------------------YG----------------------RGDR 100 (384)
T ss_pred -----------------------------h----------------------cC----------------------CCCc
Confidence 0 00 0013
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC-----CCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCc
Q 004695 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 325 (736)
Q Consensus 251 l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~-----g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq 325 (736)
+.++..+.+|. ...+|+.|+|.+++. ++ +|+++++|||..++ |+.+++++..+.+++ ++.|....
T Consensus 101 i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~----~~~vs~~~ 170 (384)
T TIGR03469 101 LTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEG----LDLVSLMV 170 (384)
T ss_pred EEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CCEEEecc
Confidence 55554333221 247999999999998 56 99999999999998 999999999887652 44554333
Q ss_pred ccccCCcCChHHHH----HHHHHHHHH---HHhhhcC-CcccccccceeecccccccccccccchhhhhhhcCCchhhhh
Q 004695 326 KFHNINKYDIYDGR----FRSAYCVQW---QGMDGLK-GPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLIN 397 (736)
Q Consensus 326 ~f~n~~~~d~~~~~----~~~f~~~~~---~g~d~~~-g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (736)
++.. .+.+... ...++.... ...+... .....|.+.++||++++
T Consensus 171 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~------------------------- 222 (384)
T TIGR03469 171 RLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALE------------------------- 222 (384)
T ss_pred cccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHH-------------------------
Confidence 3221 1222111 111111110 0111111 12246888899999995
Q ss_pred hhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccC--CCccchHHHHHHHHHcCCeEEEeCCCCCeeEe
Q 004695 398 SLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLG 475 (736)
Q Consensus 398 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g 475 (736)
+.+||+. ..+.||++++.++.++|+++.+... ......
T Consensus 223 ---------------------------------------~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~-~~~~s~ 262 (384)
T TIGR03469 223 ---------------------------------------RIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLA-ARTRSL 262 (384)
T ss_pred ---------------------------------------HcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEec-CceEEE
Confidence 2456764 4689999999999999999999865 244444
Q ss_pred ecCCChHHHhhhhhhhcc
Q 004695 476 TSTTNLNDLLIQGTRWGS 493 (736)
Q Consensus 476 ~aP~tl~~~~~Qr~RWa~ 493 (736)
..-+++.+.++|+.||+.
T Consensus 263 r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 263 RPYDGLGEIWRMIARTAY 280 (384)
T ss_pred EecCCHHHHHHHHHHhHH
Confidence 456699999999999843
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=2.5e-19 Score=195.31 Aligned_cols=344 Identities=18% Similarity=0.148 Sum_probs=222.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHH--HHHHHHHHHH--HH-HHHhhhcccccC--CCC-CCCC
Q 004695 18 IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVF--ASELLLSFIW--LL-GRAYLWRPVSRT--VFP-ERLP 89 (736)
Q Consensus 18 ~~~R~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~--~~E~~~~~~~--~l-~~~~~~~p~~r~--~~~-~~l~ 89 (736)
.+.|++.+...++....-.|-....++..+..-.=..++.+ +.-+|.+..+ .| +.+....--+|. ..+ +++|
T Consensus 62 ~lRR~~L~~~tla~tv~at~~m~~vl~~gG~~~le~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~~p~p 141 (736)
T COG2943 62 TLRRYILLGLTLAQTVVATWYMKTVLPYGGPYMLEAGILVLFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPNEPLP 141 (736)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCCCCCC
Confidence 36788888888887777667666666653321111111111 1112211111 11 111111111111 111 1122
Q ss_pred CCCCCCcEEEEEecCCCCCCchHHHH----HHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhc
Q 004695 90 EDDKLPAIDVFICTADPEKEPAIGVM----NTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (736)
Q Consensus 90 ~~~~~P~VdV~Vpt~~pynEp~~~v~----~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~ 165 (736)
+.-+-.|++|+ |||++.-|- .|.+|+.+.. -.+.+.++|+.|..+++- ++.|. +.|..+|++.
T Consensus 142 ---~~hrTAilmPi---ynEd~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpdi--alAEq----~a~~~l~~e~ 208 (736)
T COG2943 142 ---DLHRTAILMPI---YNEDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPDI--ALAEQ----KAWAELCREL 208 (736)
T ss_pred ---cccceeEEeec---cccCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCchh--hhhHH----HHHHHHHHHh
Confidence 23458899999 999987654 4555555544 345799999999998842 23332 2244445443
Q ss_pred CcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccc
Q 004695 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADL 245 (736)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~ 245 (736)
+=
T Consensus 209 ~g------------------------------------------------------------------------------ 210 (736)
T COG2943 209 GG------------------------------------------------------------------------------ 210 (736)
T ss_pred CC------------------------------------------------------------------------------
Confidence 20
Q ss_pred cCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCc
Q 004695 246 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 325 (736)
Q Consensus 246 ~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq 325 (736)
.-++.|=.|.+ |.+.||||+.+-.+..| +.+++++++|||++.. +|.+-+++..+. .+++.|.+||-.
T Consensus 211 --~~~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME---~~P~aGlIQt~P 278 (736)
T COG2943 211 --EGNIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLME---ANPDAGLIQTSP 278 (736)
T ss_pred --CCceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHh---hCCCCceeecch
Confidence 01355533333 36789999999999988 8899999999999998 999999998885 234799999866
Q ss_pred ccccCCcCChHHHHHH----HHHHHHHHHhhhcCCc--ccccccceeecccccccccccccchhhhhhhcCCchhhhhhh
Q 004695 326 KFHNINKYDIYDGRFR----SAYCVQWQGMDGLKGP--VLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSL 399 (736)
Q Consensus 326 ~f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~g~--~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~ 399 (736)
.-.|. +..|+.-+. ++=.+.-.|...|++. -|-|-|+++|.+++.+
T Consensus 279 ~~~gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~-------------------------- 330 (736)
T COG2943 279 KASGG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE-------------------------- 330 (736)
T ss_pred hhcCc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH--------------------------
Confidence 55553 345554332 3334566788888775 5899999999999864
Q ss_pred hhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCC
Q 004695 400 HQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT 479 (736)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~ 479 (736)
+|.... +-..+.|-.+.++.|+.-+-.|.+.||.+--.++ -.-++++.|.
T Consensus 331 --------------------------hcgLp~---LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~d-L~GSyEE~Pp 380 (736)
T COG2943 331 --------------------------HCGLPP---LPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYD-LDGSYEELPP 380 (736)
T ss_pred --------------------------hcCCCC---CCCCCCCCccccchHHHHHHHHhhcCceEEEecc-CCCchhhCCc
Confidence 111110 0012347778899999999999999999765543 5789999999
Q ss_pred ChHHHhhhhhhhccccccccccccCCcccCCCCCChhhHHHHhhHhhhh
Q 004695 480 NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFP 528 (736)
Q Consensus 480 tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~y~~~~~~~ 528 (736)
|+.+++++-.||++||+|.+. ++. .+++++..|+.++.....+
T Consensus 381 nLlD~l~RDRRWC~GNLqh~r-----l~~-~~GlHwvsR~h~~tGVmsY 423 (736)
T COG2943 381 NLLDELKRDRRWCHGNLQHFR-----LFL-VKGLHWVSRAHFLTGVMSY 423 (736)
T ss_pred hHHHHHhhhhHhhhcchhhce-----eec-cCCccHHHHHHHHHHHHHH
Confidence 999999999999999999663 332 3799999998777655544
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.86 E-value=1e-20 Score=194.30 Aligned_cols=225 Identities=16% Similarity=0.097 Sum_probs=159.9
Q ss_pred cEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccc
Q 004695 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (736)
Q Consensus 96 ~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (736)
+++|+||+ |||+ +.+.+++.++.+++||..+.+|+|+|||++|.|.+.+.+..
T Consensus 1 ~~sIiip~---~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPV---RNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEc---CCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 48999999 9998 78999999999999997789999999999996643211100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEe
Q 004695 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS 255 (736)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~ 255 (736)
+ ..|.+.++.
T Consensus 54 --------------------------~--------------------------------------------~~~~v~~i~ 63 (249)
T cd02525 54 --------------------------A--------------------------------------------KDPRIRLID 63 (249)
T ss_pred --------------------------h--------------------------------------------cCCeEEEEe
Confidence 0 013456664
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCCh
Q 004695 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 335 (736)
Q Consensus 256 Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (736)
.+ ++++++|+|.|++. +++|+++++|+|.++. |++|.+++..+.+++ ...|+++....+ .+.
T Consensus 64 ~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~v~~~~~~~~---~~~ 125 (249)
T cd02525 64 NP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVYP-KDYILELVEALKRTG----ADNVGGPMETIG---ESK 125 (249)
T ss_pred CC------CCCchHHHHHHHHH----hCCCEEEEECCCccCC-HHHHHHHHHHHhcCC----CCEEecceecCC---CCh
Confidence 32 35689999999999 7999999999999987 999999998887653 445555432222 122
Q ss_pred HHHHHHHHHH-HHHHH---hhhcC---CcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCC
Q 004695 336 YDGRFRSAYC-VQWQG---MDGLK---GPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNA 408 (736)
Q Consensus 336 ~~~~~~~f~~-~~~~g---~d~~~---g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~ 408 (736)
+.......+. ....+ ..... .....|.+.++||+++..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 170 (249)
T cd02525 126 FQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEK----------------------------------- 170 (249)
T ss_pred HHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHH-----------------------------------
Confidence 2211111111 00000 01111 223466677788887741
Q ss_pred CCCCchhhhHhhhcccccccccccccccccccccCC-CccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhh
Q 004695 409 NGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQ 487 (736)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~-sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Q 487 (736)
.+||++. ...||.+.+++++++|+++.|+++ +......|.+++++.+|
T Consensus 171 -----------------------------~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~~ 219 (249)
T cd02525 171 -----------------------------VGGFDESLVRNEDAELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLARQ 219 (249)
T ss_pred -----------------------------hCCCCcccCccchhHHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHHH
Confidence 2345544 347999999999999999999985 88888899999999999
Q ss_pred hhhhcccccccccc
Q 004695 488 GTRWGSGLTDVGLS 501 (736)
Q Consensus 488 r~RWa~G~~qi~~~ 501 (736)
+.||+.|..|....
T Consensus 220 ~~r~~~~~~~~~~~ 233 (249)
T cd02525 220 YFRYGKWRARTLRK 233 (249)
T ss_pred HHHHhhhhHHHHHh
Confidence 99999999998863
No 36
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.81 E-value=9.9e-20 Score=180.49 Aligned_cols=162 Identities=20% Similarity=0.163 Sum_probs=115.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+||.++++++||.++++|+|+|||++|.|.+.+. +++
T Consensus 1 VvIp~---~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~--------------~~~------------ 50 (183)
T cd06438 1 ILIPA---HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVAR--------------AAG------------ 50 (183)
T ss_pred CEEec---cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHH--------------HcC------------
Confidence 68999 9999 89999999999999998889999999999997642110 000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
..++.+.+
T Consensus 51 ------------------------------------------------------------------------~~~~~~~~ 58 (183)
T cd06438 51 ------------------------------------------------------------------------ATVLERHD 58 (183)
T ss_pred ------------------------------------------------------------------------CeEEEeCC
Confidence 01112222
Q ss_pred CCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHH
Q 004695 259 RPEHLHHFKAGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~-~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (736)
. ++++|++|+|.+++.+. .-+++|+++++|+|++++ |+++.+++..|.+. ...||+.....+... ..+.
T Consensus 59 ~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~-~~~~ 128 (183)
T cd06438 59 P---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNPDD-SWIT 128 (183)
T ss_pred C---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCCcc-CHHH
Confidence 1 25789999999998731 014699999999999998 99999999988642 246777665554322 2222
Q ss_pred H----HHHHHHHHHHHHhhhcCCc-ccccccceeeccccc
Q 004695 338 G----RFRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLY 372 (736)
Q Consensus 338 ~----~~~~f~~~~~~g~d~~~g~-~~~Gtg~~~RR~aL~ 372 (736)
. ....++.....++..+++. .+.|+|+++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~ 168 (183)
T cd06438 129 RLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLR 168 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHH
Confidence 1 2223344455567777765 568999999999994
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.81 E-value=4.2e-19 Score=177.79 Aligned_cols=165 Identities=18% Similarity=0.117 Sum_probs=121.7
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+||.++++++ |. ++|+|+|||++|.|.+.+. .
T Consensus 1 ViIp~---~Ne~-~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~~~~-~--------------------------- 45 (191)
T cd06436 1 VLVPC---LNEE-AVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAGIVR-L--------------------------- 45 (191)
T ss_pred CEEec---cccH-HHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHHHHh-h---------------------------
Confidence 68999 9999 89999999999999 64 8999999999997753211 0
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
+ ...+++.++.++.
T Consensus 46 -----------------------~-------------------------------------------~~~~~v~~i~~~~ 59 (191)
T cd06436 46 -----------------------A-------------------------------------------ITDSRVHLLRRHL 59 (191)
T ss_pred -----------------------e-------------------------------------------ecCCcEEEEeccC
Confidence 0 0012466665532
Q ss_pred CCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCC
Q 004695 259 RPEHLHHFKAGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~-------~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~ 331 (736)
.. .+.+|++|+|.+++.+. .-.++|+|+++|+|..++ |++|+++..+|.|| +++.||++.++.|.+
T Consensus 60 ~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~ 132 (191)
T cd06436 60 PN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDP----RVAGTQSRVRMYNRH 132 (191)
T ss_pred Cc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCC----ceEEEeeeEEEecCC
Confidence 11 24689999999999731 001358999999999998 99999988888877 599999999888753
Q ss_pred cCChHH----HHHHHHHHHHHHHhhhcCCcccccccceeeccccc
Q 004695 332 KYDIYD----GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 372 (736)
Q Consensus 332 ~~d~~~----~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~ 372 (736)
.+ .+. .+...++..++.++...+...++|+|++|||++|.
T Consensus 133 ~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~ 176 (191)
T cd06436 133 KN-LLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALD 176 (191)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHH
Confidence 22 222 12333445677787777765679999999999995
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.75 E-value=5.7e-18 Score=168.97 Aligned_cols=137 Identities=27% Similarity=0.393 Sum_probs=110.9
Q ss_pred EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHHHHHHH----HHHHhhhcCCc-ccc
Q 004695 286 YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCV----QWQGMDGLKGP-VLS 360 (736)
Q Consensus 286 ~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~g~-~~~ 360 (736)
+|+++|||+.++ ||++++++.++.|| ++++||+|..+.| .++.+.+.+...+.. .....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~----~~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDP----KVDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCC----CceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999998 99999999999876 6999999999874 344444444444421 12222344443 568
Q ss_pred cccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhHhhhccccccccccccccccccc
Q 004695 361 GTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG 440 (736)
Q Consensus 361 Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G 440 (736)
|+|.++||+++. +.+|
T Consensus 74 G~~~~~r~~~l~----------------------------------------------------------------~vg~ 89 (193)
T PF13632_consen 74 GSGMLFRREALR----------------------------------------------------------------EVGG 89 (193)
T ss_pred CcceeeeHHHHH----------------------------------------------------------------HhCc
Confidence 999999999994 1347
Q ss_pred cc-CCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhcccc
Q 004695 441 IL-YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 495 (736)
Q Consensus 441 ~~-~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 495 (736)
|+ +.+++||+++++++.++||++.|+++ +.+++.+|+|+.++++||+||..|.
T Consensus 90 ~~~~~~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 90 FDDPFSIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred ccccccccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 98 88999999999999999999999985 6889999999999999999999998
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.74 E-value=3.3e-17 Score=163.49 Aligned_cols=193 Identities=15% Similarity=0.131 Sum_probs=133.5
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (736)
|+|+|+||+ |||+++.+++|+.|+++++||. .+|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsiii~~---~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPV---YNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEec---ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 689999999 9999778999999999999986 899999999998554322110
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 004695 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
|.+ ..+.+.++
T Consensus 53 --------------------------~~~-------------------------------------------~~~~~~~~ 63 (202)
T cd04184 53 --------------------------YAA-------------------------------------------QDPRIKVV 63 (202)
T ss_pred --------------------------HHh-------------------------------------------cCCCEEEE
Confidence 100 01235555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCcC
Q 004695 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKY 333 (736)
Q Consensus 255 ~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~Dp~~~~~vg~VQ~Pq~f~n~~~~ 333 (736)
..++ +.+++.|+|.|++. +++||++++|+|.++. |++|.+++..+ .+| ++++|.+.......+.
T Consensus 64 ~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~- 128 (202)
T cd04184 64 FREE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHP----DADLIYSDEDKIDEGG- 128 (202)
T ss_pred Eccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCC----CCCEEEccHHhccCCC-
Confidence 4433 47899999999999 8899999999999998 99999999888 555 4666766554332110
Q ss_pred ChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCc
Q 004695 334 DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENF 413 (736)
Q Consensus 334 d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~ 413 (736)
...... +.... ..+......+.|.++++||+++.
T Consensus 129 ~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~r~~~~----------------------------------------- 162 (202)
T cd04184 129 KRSEPF----FKPDW-SPDLLLSQNYIGHLLVYRRSLVR----------------------------------------- 162 (202)
T ss_pred CEeccc----cCCCC-CHHHhhhcCCccceEeEEHHHHH-----------------------------------------
Confidence 000000 00000 00011112345667789999884
Q ss_pred hhhhHhhhcccccccccccccccccccccCC-CccchHHHHHHHHHcCCeEEEeCC
Q 004695 414 SNVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 468 (736)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~-sltED~~t~~rl~~~Gwrsvy~~~ 468 (736)
+.+||+.+ ...||.+.++|+..+||+.+|+++
T Consensus 163 -----------------------~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 163 -----------------------QVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred -----------------------HhCCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 13467665 457999999999999999999985
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.71 E-value=1e-16 Score=159.99 Aligned_cols=190 Identities=16% Similarity=0.118 Sum_probs=131.9
Q ss_pred EEEEecCCCCCCc-hHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccc
Q 004695 98 DVFICTADPEKEP-AIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (736)
Q Consensus 98 dV~Vpt~~pynEp-~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (736)
+|+||| |||+ ++.+++|+.|+++++||. .+++|+|||+++.+...+.+
T Consensus 1 sviip~---~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~-------------------------- 49 (201)
T cd04195 1 SVLMSV---YIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE-------------------------- 49 (201)
T ss_pred CEEEEc---cccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH--------------------------
Confidence 489999 9886 478999999999999995 78999999995532211111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEec
Q 004695 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~R 256 (736)
.|.+ ..| +.++..
T Consensus 50 -----------------------~~~~-------------------------------------------~~~-i~~i~~ 62 (201)
T cd04195 50 -----------------------EFKR-------------------------------------------KLP-LKVVPL 62 (201)
T ss_pred -----------------------HHHh-------------------------------------------cCC-eEEEEc
Confidence 1110 012 566665
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChH
Q 004695 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 336 (736)
Q Consensus 257 ekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (736)
++ +.|+++|+|.|++. ++||+|+++|+|.++. |+++++++..|.+ .+++++|.+.....+.+.....
T Consensus 63 ~~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 129 (201)
T cd04195 63 EK-----NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEK---NPEIDIVGGGVLEFDSDGNDIG 129 (201)
T ss_pred Cc-----cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHh---CCCeEEEcccEEEECCCCCeec
Confidence 54 36899999999999 8999999999999998 9999999998852 2257888776654433211111
Q ss_pred HH----HHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCC
Q 004695 337 DG----RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGEN 412 (736)
Q Consensus 337 ~~----~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~ 412 (736)
.. ...-.+... .....++|.+.++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~rr~~~~---------------------------------------- 163 (201)
T cd04195 130 KRRLPTSHDDILKFA------RRRSPFNHPTVMFRKSKVL---------------------------------------- 163 (201)
T ss_pred cccCCCCHHHHHHHh------ccCCCCCChHHhhhHHHHH----------------------------------------
Confidence 00 000111111 1122235666788888874
Q ss_pred chhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCC
Q 004695 413 FSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTP 468 (736)
Q Consensus 413 ~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~ 468 (736)
+.+||+.....||.++.+++..+|+++.|+++
T Consensus 164 ------------------------~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 164 ------------------------AVGGYQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred ------------------------HcCCcCCCCCchHHHHHHHHHHcCCceecccH
Confidence 24567777889999999999999999999974
No 41
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.67 E-value=9.1e-16 Score=151.55 Aligned_cols=186 Identities=17% Similarity=0.103 Sum_probs=128.9
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004695 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||+ |||+ +.+++++.|+.+++||. ++|+|+|||++|.|.+.+.+
T Consensus 1 sivi~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~--------------------------- 47 (202)
T cd06433 1 SIITPT---YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKK--------------------------- 47 (202)
T ss_pred CEEEec---cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHH---------------------------
Confidence 489999 9998 89999999999999987 89999999999976432111
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 004695 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Re 257 (736)
+.+ .+.++..+
T Consensus 48 -----------------------~~~----------------------------------------------~~~~~~~~ 58 (202)
T cd06433 48 -----------------------YED----------------------------------------------KITYWISE 58 (202)
T ss_pred -----------------------hHh----------------------------------------------hcEEEEec
Confidence 000 01233333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCcCChH
Q 004695 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIY 336 (736)
Q Consensus 258 krp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (736)
+ ..++++|+|.|++. +++|+|+++|+|.++. |+.+.+++..+ .++ +.++|.+...+.+.+.....
T Consensus 59 ~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~----~~~~v~g~~~~~~~~~~~~~ 124 (202)
T cd06433 59 P-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHP----EVDVVYGDVLLVDENGRVIG 124 (202)
T ss_pred C-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCC----CccEEEeeeEEEcCCCCccc
Confidence 3 46899999999999 8999999999999998 89999988444 444 45666665544432221111
Q ss_pred HHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhh
Q 004695 337 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNV 416 (736)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~ 416 (736)
... ...............+|+++++||+++..
T Consensus 125 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 156 (202)
T cd06433 125 RRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEK------------------------------------------- 156 (202)
T ss_pred CCC-----CcchhhhHHhhcCcccCcceEEEHHHHHH-------------------------------------------
Confidence 000 00001112223345677888999998841
Q ss_pred hHhhhcccccccccccccccccccccCC-CccchHHHHHHHHHcCCeEEEeCC
Q 004695 417 LQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 468 (736)
Q Consensus 417 ~~~~~~~v~~c~ye~~t~~g~~~G~~~~-sltED~~t~~rl~~~Gwrsvy~~~ 468 (736)
.+||+.+ ...||.+..+++..+|++.+++++
T Consensus 157 ---------------------~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 157 ---------------------YGGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred ---------------------hCCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 2346544 567999999999999999998875
No 42
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.65 E-value=1.1e-15 Score=163.73 Aligned_cols=110 Identities=18% Similarity=0.070 Sum_probs=88.4
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004695 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||+ |||+++.+.+||.|+++++||....+|+|+||||+|.|.+.+.+.
T Consensus 1 SIIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~-------------------------- 51 (299)
T cd02510 1 SVIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEE-------------------------- 51 (299)
T ss_pred CEEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHH--------------------------
Confidence 589999 999888999999999999998656799999999999775432210
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 004695 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Re 257 (736)
+. ....|++.++..+
T Consensus 52 -----------------------~~------------------------------------------~~~~~~v~vi~~~ 66 (299)
T cd02510 52 -----------------------YY------------------------------------------KKYLPKVKVLRLK 66 (299)
T ss_pred -----------------------HH------------------------------------------hhcCCcEEEEEcC
Confidence 00 0012356777554
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004695 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 258 krp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
+ +.|+++|.|.|++. ++||+|+++|+|.++. |++|.+++..+..
T Consensus 67 ~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~ 110 (299)
T cd02510 67 K-----REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAE 110 (299)
T ss_pred C-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHh
Confidence 4 47899999999999 8999999999999997 9999999988764
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.64 E-value=1.1e-14 Score=151.19 Aligned_cols=123 Identities=13% Similarity=0.098 Sum_probs=89.0
Q ss_pred CCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004695 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||+ |||+ ..+..++.++.....+...++|+|+||||+|.|.+.+.+..
T Consensus 7 ~~~~vsVvIp~---yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~-------------------- 62 (243)
T PLN02726 7 GAMKYSIIVPT---YNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQ-------------------- 62 (243)
T ss_pred CCceEEEEEcc---CCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHH--------------------
Confidence 45899999999 9999 67788887776533222259999999999998864332211
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 004695 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
+.|. -+.+.
T Consensus 63 --------------------------~~~~---------------------------------------------~~~v~ 71 (243)
T PLN02726 63 --------------------------KVYG---------------------------------------------EDRIL 71 (243)
T ss_pred --------------------------HhcC---------------------------------------------CCcEE
Confidence 0000 01345
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccC
Q 004695 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 324 (736)
Q Consensus 253 yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~P 324 (736)
++.+++ +.||++|+|.|++. ++||+|+++|+|..++ |+.|.+++..+.++ +.++|.+.
T Consensus 72 ~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~ 129 (243)
T PLN02726 72 LRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSFIKKQRET----GADIVTGT 129 (243)
T ss_pred EEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHHHHHHHhc----CCcEEEEc
Confidence 554443 46899999999999 8999999999999987 99999999888654 24555544
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.63 E-value=4.4e-15 Score=148.93 Aligned_cols=162 Identities=18% Similarity=0.131 Sum_probs=107.6
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004695 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+ ..+.++|.|+++++|| +++|+|+|||++|.|.+.+.+.++
T Consensus 1 sIvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~------------------------ 50 (214)
T cd04196 1 AVLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID------------------------ 50 (214)
T ss_pred CEEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh------------------------
Confidence 589999 9999 8899999999999999 499999999999987643322110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 004695 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Re 257 (736)
.|| +.+.++..+
T Consensus 51 --------------------------------------------~~~------------------------~~~~~~~~~ 62 (214)
T cd04196 51 --------------------------------------------KDP------------------------FIIILIRNG 62 (214)
T ss_pred --------------------------------------------cCC------------------------ceEEEEeCC
Confidence 000 123444443
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCcCChH
Q 004695 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIY 336 (736)
Q Consensus 258 krp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (736)
+ ++|+++|+|.++.. ++||+|+++|+|.++. |+.|.+++..+ .++ ..+++.+.....+.+.. ..
T Consensus 63 ~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~ 127 (214)
T cd04196 63 K-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDD----KPLLVYSDLELVDENGN-PI 127 (214)
T ss_pred C-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCC----CceEEecCcEEECCCCC-Cc
Confidence 3 57999999999999 8999999999999988 99999999884 443 46677776544332111 11
Q ss_pred HHHHHHHHHH--HHHHhhhcCCcccccccceeeccccc
Q 004695 337 DGRFRSAYCV--QWQGMDGLKGPVLSGTGYYIKRESLY 372 (736)
Q Consensus 337 ~~~~~~f~~~--~~~g~d~~~g~~~~Gtg~~~RR~aL~ 372 (736)
.......... ..............|+++++||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 165 (214)
T cd04196 128 GESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLE 165 (214)
T ss_pred ccccccccccCCccCHHHHHHhCccCCceeeEEHHHHH
Confidence 1000000000 00011112233457888999999884
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.62 E-value=7.9e-15 Score=148.42 Aligned_cols=178 Identities=18% Similarity=0.100 Sum_probs=120.8
Q ss_pred EEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccc
Q 004695 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (736)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (736)
|+|+||+ |||+ +.+.+++.|++++.|+. .+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPT---LNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEc---cCcH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc--------------------------
Confidence 6899999 9998 58999999999999954 89999999999865321100
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEec
Q 004695 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~R 256 (736)
++++++.
T Consensus 49 ------------------------------------------------------------------------~~~~~~~- 55 (221)
T cd02522 49 ------------------------------------------------------------------------AGVVVIS- 55 (221)
T ss_pred ------------------------------------------------------------------------CCeEEEe-
Confidence 1244543
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChH
Q 004695 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 336 (736)
Q Consensus 257 ekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (736)
. ..+|++|+|.|++. +++|+|+++|+|.++. |+++++++..+.++. ...+.....+.+. +..
T Consensus 56 -~-----~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~~~~~~~~~~~---~~~ 117 (221)
T cd02522 56 -S-----PKGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRADG----AVAGAFRLRFDDP---GPR 117 (221)
T ss_pred -C-----CcCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcCC----cEEEEEEeeecCC---ccc
Confidence 1 24699999999999 7899999999999997 999999876665432 2222222223321 111
Q ss_pred HHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhh
Q 004695 337 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNV 416 (736)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~ 416 (736)
... .......+....+..+.+.|.++||+++.
T Consensus 118 ~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-------------------------------------------- 149 (221)
T cd02522 118 LRL----LELGANLRSRLFGLPYGDQGLFIRRELFE-------------------------------------------- 149 (221)
T ss_pred hhh----hhhcccceecccCCCcCCceEEEEHHHHH--------------------------------------------
Confidence 110 01000111111222334556777888774
Q ss_pred hHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEE
Q 004695 417 LQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY 465 (736)
Q Consensus 417 ~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy 465 (736)
+.+||++....||++.++|+..+|++..+
T Consensus 150 --------------------~~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 150 --------------------ELGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred --------------------HhCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 24578888889999999999999999876
No 46
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.61 E-value=9.8e-15 Score=139.81 Aligned_cols=157 Identities=17% Similarity=0.168 Sum_probs=121.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.|+.+++||. .+++|+|||+++.|.+.+.+..
T Consensus 1 vii~~---~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVN---YNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEe---cCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 58999 9996 89999999999999964 8999999999986543221100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
+++.++..++
T Consensus 49 ----------------------------------------------------------------------~~~~~~~~~~ 58 (166)
T cd04186 49 ----------------------------------------------------------------------PEVRLIRNGE 58 (166)
T ss_pred ----------------------------------------------------------------------CCeEEEecCC
Confidence 0244554433
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHH
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (736)
+.++++|+|.+++. +++++++++|+|.++. |+++.+++..+.+. ++++++++.
T Consensus 59 -----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~---~~~~~~~~~-------------- 111 (166)
T cd04186 59 -----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQD---PDVGIVGPK-------------- 111 (166)
T ss_pred -----CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhC---CCceEEEcc--------------
Confidence 47899999999999 7899999999999998 89999988765432 256776433
Q ss_pred HHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhH
Q 004695 339 RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 418 (736)
Q Consensus 339 ~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
++|++.++||+++..
T Consensus 112 --------------------~~~~~~~~~~~~~~~--------------------------------------------- 126 (166)
T cd04186 112 --------------------VSGAFLLVRREVFEE--------------------------------------------- 126 (166)
T ss_pred --------------------CceeeEeeeHHHHHH---------------------------------------------
Confidence 578888999998841
Q ss_pred hhhcccccccccccccccccccccCCC--ccchHHHHHHHHHcCCeEEEeCC
Q 004695 419 EETGVLASCSYEHQTKWGEEVGILYQS--VSEDLFTGFILHCKGWTSTYLTP 468 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~~g~~~G~~~~s--ltED~~t~~rl~~~Gwrsvy~~~ 468 (736)
.+||+... ..||.+.++++.++||++.++++
T Consensus 127 -------------------~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 127 -------------------VGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred -------------------cCCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 23455442 45999999999999999999975
No 47
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.61 E-value=1.7e-14 Score=141.47 Aligned_cols=104 Identities=18% Similarity=0.178 Sum_probs=79.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+++||.|+.+++|+. .+|+|+|||++|.|.+.+.+..
T Consensus 1 ivip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~-------------------------- 48 (182)
T cd06420 1 LIITT---YNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFK-------------------------- 48 (182)
T ss_pred CEEee---cCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHH--------------------------
Confidence 67999 9998 78999999999999986 7999999999996643221110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
+ + ... .++++.+++
T Consensus 49 ------------------------~---~--------------------------------------~~~-~~~~~~~~~ 62 (182)
T cd06420 49 ------------------------S---Q--------------------------------------FPI-PIKHVWQED 62 (182)
T ss_pred ------------------------h---h--------------------------------------cCC-ceEEEEcCC
Confidence 0 0 000 134443332
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
. ..+|++++|.+++. ++||+|+++|+|.++. |++|++++..+
T Consensus 63 ~----~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~ 104 (182)
T cd06420 63 E----GFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA 104 (182)
T ss_pred c----chhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh
Confidence 1 34799999999999 8999999999999997 99999999877
No 48
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.61 E-value=3.5e-14 Score=144.49 Aligned_cols=111 Identities=14% Similarity=0.109 Sum_probs=82.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.|+++++|| +..+|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~---------------------------- 47 (219)
T cd06913 1 IILPV---HNGE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEK---------------------------- 47 (219)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHH----------------------------
Confidence 68999 9998 8999999999999998 3599999999999987542221
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
|.+ +. ..+++.++..+.
T Consensus 48 ----------------------~~~---~~--------------------------------------~~~~~~~~~~~~ 64 (219)
T cd06913 48 ----------------------WRK---KL--------------------------------------EDSGVIVLVGSH 64 (219)
T ss_pred ----------------------HHH---hC--------------------------------------cccCeEEEEecc
Confidence 100 00 001244544332
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
+.+ .+.|.+.|+|.|++. ++||+++++|+|.++. |+.+.+.+..+.+
T Consensus 65 ~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~ 111 (219)
T cd06913 65 NSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQ 111 (219)
T ss_pred cCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHh
Confidence 211 246899999999999 8999999999999987 8999887766643
No 49
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.60 E-value=3.3e-14 Score=144.17 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=83.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ ..+.+++.++..+.|+ ...+|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPT---YNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEec---cchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 68999 9998 7899999999999982 3499999999999977532111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
|.+ ..|.+.++..++
T Consensus 48 ----------------------~~~-------------------------------------------~~~~i~~~~~~~ 62 (224)
T cd06442 48 ----------------------LAK-------------------------------------------EYPRVRLIVRPG 62 (224)
T ss_pred ----------------------HHH-------------------------------------------hCCceEEEecCC
Confidence 100 012344555544
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp 312 (736)
++||++|+|.|++. +.||+|+++|+|..+. |+.|..++..+.++
T Consensus 63 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~ 106 (224)
T cd06442 63 -----KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEG 106 (224)
T ss_pred -----CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcC
Confidence 57899999999999 8899999999999987 99999999987655
No 50
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.57 E-value=1.9e-14 Score=156.76 Aligned_cols=109 Identities=18% Similarity=0.214 Sum_probs=88.9
Q ss_pred CCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcc
Q 004695 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (736)
.|.|+|+||+ ||++ +.+.+|+.|+++++|+. ++|+|+|||++|.|.+.+.+
T Consensus 5 ~p~vSVIIP~---yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~----------------------- 55 (328)
T PRK10073 5 TPKLSIIIPL---YNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKH----------------------- 55 (328)
T ss_pred CCeEEEEEec---cCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHH-----------------------
Confidence 4889999999 9999 89999999999999986 99999999999977542211
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEE
Q 004695 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
|.+ ..|++.+
T Consensus 56 ---------------------------~~~-------------------------------------------~~~~i~v 65 (328)
T PRK10073 56 ---------------------------YAE-------------------------------------------NYPHVRL 65 (328)
T ss_pred ---------------------------HHh-------------------------------------------hCCCEEE
Confidence 110 1134666
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004695 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 254 v~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp 312 (736)
+.. + ++|.++|.|.|++. ++||||+++|+|..+. |+.+.+++..+.++
T Consensus 66 i~~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~ 113 (328)
T PRK10073 66 LHQ-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED 113 (328)
T ss_pred EEC-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC
Confidence 643 2 47899999999999 8999999999999988 99999999876543
No 51
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.55 E-value=4.4e-14 Score=140.47 Aligned_cols=153 Identities=18% Similarity=0.200 Sum_probs=116.9
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHH-H
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR-S 342 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~-~ 342 (736)
.+.|.+||..+++. . +++|+++++|+|..++ |++|++++..+.|| ++|.|.++....+. +.+..... .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p----~vglVt~~~~~~~~---~~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADP----GVGLVTGLPRGVPA---RGFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCC----CCcEEEecccccCC---cCHHHHHHHH
Confidence 57899999999996 3 7899999999999998 99999999999987 59999876665543 33433332 2
Q ss_pred HHHHHHHHhh-hcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhHhhh
Q 004695 343 AYCVQWQGMD-GLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEET 421 (736)
Q Consensus 343 f~~~~~~g~d-~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 421 (736)
++.....-.. .-+..++.|..+.+||++|+.
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~------------------------------------------------ 115 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALEE------------------------------------------------ 115 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHHH------------------------------------------------
Confidence 2221111111 124457889999999999952
Q ss_pred cccccccccccccccccccccC--CCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecC----CChHHHhhhhhhhcc
Q 004695 422 GVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTST----TNLNDLLIQGTRWGS 493 (736)
Q Consensus 422 ~~v~~c~ye~~t~~g~~~G~~~--~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP----~tl~~~~~Qr~RWa~ 493 (736)
.+||.. +.+.||+.+|-+++++|||++..+. +......| .+++++++++.||++
T Consensus 116 ----------------~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 116 ----------------IGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ----------------cccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 345554 6899999999999999999999874 66666666 489999999999985
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.54 E-value=1.2e-13 Score=138.35 Aligned_cols=118 Identities=15% Similarity=0.118 Sum_probs=87.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||| |||+ ..+.+++.|++++.||. .+|+|+|||++|.|.+.+.+. +
T Consensus 1 viI~~---~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~--------------~------------ 48 (202)
T cd04185 1 AVVVT---YNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSL--------------G------------ 48 (202)
T ss_pred CEEEe---eCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHh--------------c------------
Confidence 68999 9999 89999999999999995 689999999999764321110 0
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
... .+.++.-++
T Consensus 49 -------------------------------------------------------------------~~~-~i~~~~~~~ 60 (202)
T cd04185 49 -------------------------------------------------------------------DLD-NIVYLRLPE 60 (202)
T ss_pred -------------------------------------------------------------------CCC-ceEEEECcc
Confidence 001 145555444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccc
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~ 328 (736)
+.|++.++|.+++.+- .+++|+++++|+|.+++ |+++++++..+.++ +++.+ +|..+.
T Consensus 61 -----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~----~~~~~-~~~~~~ 118 (202)
T cd04185 61 -----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKD----NPQFL-APLVLD 118 (202)
T ss_pred -----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcC----CceEe-cceeEc
Confidence 3678899999988632 25799999999999998 99999999988755 46666 344433
No 53
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.54 E-value=4.9e-12 Score=143.82 Aligned_cols=168 Identities=15% Similarity=0.168 Sum_probs=105.5
Q ss_pred CCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCCcCChH--HHHHHHHH-HHHHHHhhhcCCcc
Q 004695 283 NSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIY--DGRFRSAY-CVQWQGMDGLKGPV 358 (736)
Q Consensus 283 ~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n~~~~d~~--~~~~~~f~-~~~~~g~d~~~g~~ 358 (736)
..|||+.+|||+.+. |+.+.+++.-+. || +++-|.+.-+..|...+ .. -+..+.+. ...+++..+.-|..
T Consensus 201 ~~~~il~~DaDt~~~-p~~~~~lv~~m~~d~----~i~gvCG~t~i~n~~~s-~~t~~Q~fEY~ish~l~Ka~Es~fG~V 274 (527)
T PF03142_consen 201 FYEYILMVDADTKFD-PDSVNRLVDAMERDP----KIGGVCGETRIDNKGQS-WWTMYQVFEYAISHHLQKAFESVFGSV 274 (527)
T ss_pred ceEEEEEecCCceEc-HHHHHHHHHHHcCCC----CeEEEeceeEEcCCCCC-HhhheeccchhHHHHHHHHHHHHhCce
Confidence 469999999999998 999999998774 55 68878776566654221 11 12222222 23445555554544
Q ss_pred c--ccccceeeccccccc-cccccc-chhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhHhhhccccccccccccc
Q 004695 359 L--SGTGYYIKRESLYAD-FTHTVN-DISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTK 434 (736)
Q Consensus 359 ~--~Gtg~~~RR~aL~~~-~~~~~~-~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~ 434 (736)
. .|.-+++|-+|+..+ ....+- ...+.-++|.. ...
T Consensus 275 tCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~---------------------------------------~~~- 314 (527)
T PF03142_consen 275 TCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSE---------------------------------------NPV- 314 (527)
T ss_pred eecCCcceeeeeehhccccccccccccchHHHHHHhh---------------------------------------ccc-
Confidence 3 466668999999751 000000 00000001100 000
Q ss_pred cccccc-ccCCCccchHHHHHHHHHc--CCeEEEeCCCCCeeEeecCCChHHHhhhhhhhccccccccc
Q 004695 435 WGEEVG-ILYQSVSEDLFTGFILHCK--GWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGL 500 (736)
Q Consensus 435 ~g~~~G-~~~~sltED~~t~~rl~~~--Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~ 500 (736)
+... ..-..+.||=.++-.|.++ |||..|++. +.++..+|+|+..+++||+||..|++-.++
T Consensus 315 --dtlh~~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 315 --DTLHQKNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred --hHHHHHhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 0000 0113578999888777776 899999985 999999999999999999999999986543
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.53 E-value=3e-14 Score=135.69 Aligned_cols=118 Identities=28% Similarity=0.360 Sum_probs=87.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.+++++.|+. .+|+|+|||+++.|.+.+.+..
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~-------------------------- 48 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELA-------------------------- 48 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHh--------------------------
Confidence 57999 9999 89999999999999965 8999999999997643221100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
.. ..+.+.++..++
T Consensus 49 -----------------------~~-------------------------------------------~~~~~~~~~~~~ 62 (180)
T cd06423 49 -----------------------AL-------------------------------------------YIRRVLVVRDKE 62 (180)
T ss_pred -----------------------cc-------------------------------------------ccceEEEEEecc
Confidence 00 001244554443
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHh-hcCCCCCCcEEEEccCcccc
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKISSSLAFVQFPQKFH 328 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~-f~Dp~~~~~vg~VQ~Pq~f~ 328 (736)
+.||+.|+|.+++. +++|+|+++|+|..+. |++|.+++.. +.++ +++.|.......
T Consensus 63 -----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~ 119 (180)
T cd06423 63 -----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADP----KVGAVQGRVRVR 119 (180)
T ss_pred -----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCC----CeeeEeeeEEEe
Confidence 47899999999999 7999999999999998 9999998544 4444 577776555443
No 55
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.51 E-value=4e-13 Score=135.92 Aligned_cols=107 Identities=20% Similarity=0.125 Sum_probs=81.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCC--CCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dY--P~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (736)
|+||+ |||+ ..+.+++.++.++.+ +....+|+|+|||++|.|.+.+.+.
T Consensus 1 iiip~---yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~------------------------- 51 (211)
T cd04188 1 VVIPA---YNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKL------------------------- 51 (211)
T ss_pred CEEcc---cChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHH-------------------------
Confidence 68999 9999 889999999998865 4345999999999999775322111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc-EEEEe
Q 004695 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL-LVYVS 255 (736)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~-l~yv~ 255 (736)
.+ ..|. +.++.
T Consensus 52 -------------------------~~-------------------------------------------~~~~~i~~i~ 63 (211)
T cd04188 52 -------------------------AR-------------------------------------------KNPALIRVLT 63 (211)
T ss_pred -------------------------HH-------------------------------------------hCCCcEEEEE
Confidence 00 0011 34554
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004695 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 256 Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp 312 (736)
.++ +.||++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.++
T Consensus 64 ~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~ 110 (211)
T cd04188 64 LPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTS 110 (211)
T ss_pred ccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc
Confidence 443 36899999999999 8999999999999987 99999999886543
No 56
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.51 E-value=6e-14 Score=143.74 Aligned_cols=146 Identities=17% Similarity=0.099 Sum_probs=89.1
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC---CCEEEEeCCCCCCCchHHHHHHH---HhhcCCCCCCcEEEEcc
Q 004695 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISN---SPYILGLDCDMYCNDPTSARQAM---CFHLDPKISSSLAFVQF 323 (736)
Q Consensus 250 ~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~---g~~Il~lDAD~~~~~p~~L~~~v---~~f~Dp~~~~~vg~VQ~ 323 (736)
++.++..++ +.|+++|+|.|++. +. +|+|+++|+|..++ |++|.+++ ..+. .+++++.+ +
T Consensus 48 ~i~~i~~~~-----n~G~~~a~N~g~~~----a~~~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~---~~~~~~~~-~ 113 (237)
T cd02526 48 KIELIHLGE-----NLGIAKALNIGIKA----ALENGADYVLLFDQDSVPP-PDMVEKLLAYKILSD---KNSNIGAV-G 113 (237)
T ss_pred cEEEEECCC-----ceehHHhhhHHHHH----HHhCCCCEEEEECCCCCcC-HhHHHHHHHHHHhhc---cCCCeEEE-e
Confidence 366666554 36799999999998 54 49999999999998 99999985 3222 12346655 5
Q ss_pred CcccccCCcCChHHHHHHH-HHHHHHHHhhh-cCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhh
Q 004695 324 PQKFHNINKYDIYDGRFRS-AYCVQWQGMDG-LKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQ 401 (736)
Q Consensus 324 Pq~f~n~~~~d~~~~~~~~-f~~~~~~g~d~-~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~ 401 (736)
|+................. .+......... .......|+|+++||+++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~---------------------------- 165 (237)
T cd02526 114 PRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEK---------------------------- 165 (237)
T ss_pred eeEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHH----------------------------
Confidence 5544322111100000000 00000000111 12234567888999998852
Q ss_pred hhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCc--cchHHHHHHHHHcCCeEEEeCCCCCeeEe
Q 004695 402 SYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV--SEDLFTGFILHCKGWTSTYLTPFRPQFLG 475 (736)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sl--tED~~t~~rl~~~Gwrsvy~~~~~~~~~g 475 (736)
.+||+.... .||++.++|+..+||+..|++. +...-
T Consensus 166 ------------------------------------~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~--~~v~h 203 (237)
T cd02526 166 ------------------------------------VGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD--AVLKH 203 (237)
T ss_pred ------------------------------------hCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC--eEEEe
Confidence 345665432 5899999999999999999985 44443
No 57
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.49 E-value=6.1e-13 Score=141.79 Aligned_cols=109 Identities=16% Similarity=0.262 Sum_probs=86.6
Q ss_pred CCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004695 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+||.|+++++||. .+|+|+|||+++ .+.+.+..
T Consensus 3 ~~p~VSVIip~---yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPT---WNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEe---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 35899999999 9999 67889999999999997 999999999984 21111100
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 004695 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
+++ ..|++.
T Consensus 55 -----------------------------~~~------------------------------------------~~~ri~ 63 (279)
T PRK10018 55 -----------------------------TAL------------------------------------------NDPRIT 63 (279)
T ss_pred -----------------------------HHc------------------------------------------CCCCEE
Confidence 000 013577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004695 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 253 yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
|+..++ +.|+++|+|.|++. ++||||+++|+|.+.. |+.|.+++.++.
T Consensus 64 ~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 64 YIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 876554 47899999999999 8999999999999998 999999888764
No 58
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.46 E-value=1.4e-12 Score=136.77 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=39.8
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCC-CCCCceEEEEEcCCCCccchh
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLH 146 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~d-YP~~kl~v~v~DDg~~~~T~~ 146 (736)
|.|+|+||| |||+ +.+.+|+.|+.++. .+...++|+|+||||+|.|.+
T Consensus 1 ~~vSVIi~~---yN~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVA---FRNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEe---CCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 679999999 9998 78999999998642 222349999999999998764
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.44 E-value=7.1e-14 Score=133.04 Aligned_cols=164 Identities=16% Similarity=0.064 Sum_probs=108.7
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004695 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+ +.+.+|+.|++.+.++. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPT---YNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEE---SS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEe---eCCH-HHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc------------------------
Confidence 689999 9996 89999999999996664 89999999999876432222110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 004695 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Re 257 (736)
..+++.|+.++
T Consensus 51 ---------------------------------------------------------------------~~~~i~~i~~~ 61 (169)
T PF00535_consen 51 ---------------------------------------------------------------------SDPNIRYIRNP 61 (169)
T ss_dssp ---------------------------------------------------------------------CSTTEEEEEHC
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 11358898887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHH
Q 004695 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (736)
Q Consensus 258 krp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (736)
++ .++++|+|.|++. ++++|++++|+|.++. |++|.+++..+.+.. ..+..........+........
T Consensus 62 ~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 129 (169)
T PF00535_consen 62 EN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRL 129 (169)
T ss_dssp CC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCC
T ss_pred cc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecCCcccccccc
Confidence 63 5899999999999 8999999999999998 899999999987632 2333332222222211110000
Q ss_pred H--HHHHHHHHHHHHhhhcCCcccccccceeeccccc
Q 004695 338 G--RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 372 (736)
Q Consensus 338 ~--~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~ 372 (736)
. .....+..............++|+++++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 166 (169)
T PF00535_consen 130 RFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFE 166 (169)
T ss_dssp TSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHH
T ss_pred chhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHH
Confidence 0 0011222333444555677889999999999985
No 60
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.40 E-value=2.4e-12 Score=126.43 Aligned_cols=120 Identities=16% Similarity=0.137 Sum_probs=90.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ |||+ +.+.+|+.++..+.|+....+|+|+|||++|.|.+.+.+.
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~--------------------------- 49 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIAREL--------------------------- 49 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHH---------------------------
Confidence 57999 9998 8999999999999986556999999999999764322111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
.+ ..|.+.++..++
T Consensus 50 -----------------------~~-------------------------------------------~~~~~~~~~~~~ 63 (185)
T cd04179 50 -----------------------AA-------------------------------------------RVPRVRVIRLSR 63 (185)
T ss_pred -----------------------HH-------------------------------------------hCCCeEEEEccC
Confidence 00 012345555444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCccccc
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 329 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n 329 (736)
..||++|+|.+++. +.||+++++|+|..+. |+.|.+++..+.++ +.++|+++....+
T Consensus 64 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~~~~~~ 120 (185)
T cd04179 64 -----NFGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEG----GADVVIGSRFVRG 120 (185)
T ss_pred -----CCCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc----CCcEEEEEeecCC
Confidence 36799999999999 8899999999999987 99999999875543 3556666655443
No 61
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.39 E-value=8.3e-11 Score=128.58 Aligned_cols=128 Identities=18% Similarity=0.129 Sum_probs=90.7
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcC------CCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhc
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~------dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~ 165 (736)
...|.|+|+||+ |||+ ..+.+++.++.++ ++|....+|+|+||||+|.|.+.+.+.++ ++
T Consensus 67 ~~~~~isVVIP~---yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~----------~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPA---YNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWR----------QN 132 (333)
T ss_pred CCCeEEEEEEee---CCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHH----------hc
Confidence 457899999999 9999 6789999888763 24555699999999999988653222110 00
Q ss_pred CcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccc
Q 004695 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADL 245 (736)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~ 245 (736)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (333)
T PTZ00260 133 I------------------------------------------------------------------------------- 133 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEcc
Q 004695 246 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQF 323 (736)
Q Consensus 246 ~~~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~ 323 (736)
..-+++.++..++ +.||++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.+-+ .+..+.|.+
T Consensus 134 ~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~~~~-~~~~dvV~G 200 (333)
T PTZ00260 134 NPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIMLKIE-QNGLGIVFG 200 (333)
T ss_pred CCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHHHhh-ccCCceEEe
Confidence 0001255555444 47899999999999 8999999999999987 999988887775310 113555554
No 62
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.30 E-value=2.3e-11 Score=129.04 Aligned_cols=145 Identities=14% Similarity=-0.048 Sum_probs=90.6
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccc
Q 004695 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (736)
Q Consensus 249 p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~ 328 (736)
|++.|+..++ +.|.|+|+|.|++.+-. .++|+|+++|.|.+++ |+.+.+++..+..+ +.+++.|+ |..+.
T Consensus 45 ~~i~~i~~~~-----N~G~a~a~N~Gi~~a~~-~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 45 QKIALIHLGD-----NQGIAGAQNQGLDASFR-RGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CCeEEEECCC-----CcchHHHHHHHHHHHHH-CCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 3577776554 47899999999988210 2689999999999998 89999999887532 22578774 54333
Q ss_pred cCCcCChHHH--HHHHHHHHH-HHHhhh-cCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhc
Q 004695 329 NINKYDIYDG--RFRSAYCVQ-WQGMDG-LKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYK 404 (736)
Q Consensus 329 n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~ 404 (736)
.. ....+.. ......... ...... .......++|+++||+++..
T Consensus 115 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~------------------------------- 162 (281)
T TIGR01556 115 RG-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQR------------------------------- 162 (281)
T ss_pred CC-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHH-------------------------------
Confidence 21 1111110 000000000 000011 11224467888999998841
Q ss_pred ccCCCCCCchhhhHhhhcccccccccccccccccccccCC--CccchHHHHHHHHHcCCeEEEeCC
Q 004695 405 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 468 (736)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~--sltED~~t~~rl~~~Gwrsvy~~~ 468 (736)
.+||+++ .=.||++.++|+..+||++.++++
T Consensus 163 ---------------------------------iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 163 ---------------------------------LGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred ---------------------------------hCCccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 2345543 124899999999999999999985
No 63
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.26 E-value=1e-10 Score=126.36 Aligned_cols=123 Identities=18% Similarity=0.102 Sum_probs=88.7
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (736)
..-|+|+|+||+ |||+ +.+.++|.++.++.++....+|+|+||||+|.|.+.+.+ ++.+
T Consensus 28 ~~~~~vSVVIPa---yNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~--------------~~~~--- 86 (306)
T PRK13915 28 KAGRTVSVVLPA---LNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAA--------------AGAR--- 86 (306)
T ss_pred cCCCCEEEEEec---CCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHH--------------hcch---
Confidence 356899999999 9999 789999999998765222469999999999987643221 1100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 004695 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
.+. ..
T Consensus 87 ----------------------------v~~-----------------------------------------------~~ 91 (306)
T PRK13915 87 ----------------------------VVS-----------------------------------------------RE 91 (306)
T ss_pred ----------------------------hhc-----------------------------------------------ch
Confidence 000 00
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhhc-CCCCCCcEEEEcc
Q 004695 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKISSSLAFVQF 323 (736)
Q Consensus 252 ~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~-~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~ 323 (736)
..+.+ .+ .++||++|+|.++.. ++||+|+++|||.. ++ |+++.+++..+. || ++++|.+
T Consensus 92 ~~~~~--~~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~-p~~l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 92 EILPE--LP--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFD-PMFVPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred hhhhc--cc--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCC-HHHHHHHHHHHHhCC----CceEEEE
Confidence 00001 01 147899999999998 89999999999997 55 999999998886 65 4666654
No 64
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.25 E-value=8.5e-11 Score=115.76 Aligned_cols=105 Identities=12% Similarity=0.110 Sum_probs=63.7
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCccccc
Q 004695 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 329 (736)
Q Consensus 250 ~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n 329 (736)
++.++..++ +.||++|+|.+++. +.+|+|+++|+|..+. |+.|.+++..+ +++ .++.+. .....+
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~-~~~--~~~v~g--~~~~~~ 120 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKW-EEG--YDVVYG--VRKNRK 120 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHH-hCC--CcEEEE--EecCCc
Confidence 466665444 46899999999999 8899999999999987 99999999874 332 233322 221111
Q ss_pred CCcCChHHHHH-HHHHHHHHHHhhhcCCcccccccceeecccccc
Q 004695 330 INKYDIYDGRF-RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA 373 (736)
Q Consensus 330 ~~~~d~~~~~~-~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~ 373 (736)
........ ..++.. .....+..-+...|+..++||+++..
T Consensus 121 ---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~ 161 (181)
T cd04187 121 ---ESWLKRLTSKLFYRL-INKLSGVDIPDNGGDFRLMDRKVVDA 161 (181)
T ss_pred ---chHHHHHHHHHHHHH-HHHHcCCCCCCCCCCEEEEcHHHHHH
Confidence 11111111 112221 12222233334567777899999963
No 65
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.21 E-value=1.6e-09 Score=118.10 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=81.5
Q ss_pred CCcEEEEEecCCCCCCchHHHHHHHHHHHcC--CCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004695 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMAL--DYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~--dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (736)
.++++|+||+ |||+ +.+.+++.++.+. ..+ ...+|+|+|||++|.|.+.+.+.++ +
T Consensus 5 ~~~vSVVIP~---yNE~-~~i~~~l~~l~~~~~~~~-~~~EIIvVDDgS~D~T~~il~~~~~----------~------- 62 (325)
T PRK10714 5 IKKVSVVIPV---YNEQ-ESLPELIRRTTAACESLG-KEYEILLIDDGSSDNSAEMLVEAAQ----------A------- 62 (325)
T ss_pred CCeEEEEEcc---cCch-hhHHHHHHHHHHHHHhCC-CCEEEEEEeCCCCCcHHHHHHHHHh----------h-------
Confidence 4679999999 9999 7788887766431 122 2489999999999988654433210 0
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 004695 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
+ -+++
T Consensus 63 -----------------------------~----------------------------------------------~~~v 67 (325)
T PRK10714 63 -----------------------------P----------------------------------------------DSHI 67 (325)
T ss_pred -----------------------------c----------------------------------------------CCcE
Confidence 0 0124
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004695 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 252 ~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
+.+..++ +.||++|+|+|+++ ++||+++++|||...+ |+.+.+++..+.
T Consensus 68 ~~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 68 VAILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred EEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 4443333 47899999999999 8999999999999987 999999998774
No 66
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.20 E-value=3.2e-10 Score=105.18 Aligned_cols=113 Identities=28% Similarity=0.285 Sum_probs=82.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004695 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (736)
Q Consensus 99 V~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (736)
|+||+ +||+ ..+..|+.+++.++|+. .+++|+||++++.|.+.+.+..
T Consensus 1 iii~~---~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~-------------------------- 48 (156)
T cd00761 1 VIIPA---YNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYA-------------------------- 48 (156)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHH--------------------------
Confidence 57999 8897 78999999999999964 8899999999985543221110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 004695 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (736)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 258 (736)
+. .+...++.+++
T Consensus 49 -----------------------~~--------------------------------------------~~~~~~~~~~~ 61 (156)
T cd00761 49 -----------------------KK--------------------------------------------DPRVIRVINEE 61 (156)
T ss_pred -----------------------hc--------------------------------------------CCCeEEEEecC
Confidence 00 00133433333
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH-hhcCCCCCCcEEEEccC
Q 004695 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC-FHLDPKISSSLAFVQFP 324 (736)
Q Consensus 259 rp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~-~f~Dp~~~~~vg~VQ~P 324 (736)
+.+|++++|.+++. .++|+++++|+|.++. |+++..++. +..++ +.+.|+++
T Consensus 62 -----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~----~~~~v~~~ 114 (156)
T cd00761 62 -----NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADP----EADAVGGP 114 (156)
T ss_pred -----CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCC----CceEEecc
Confidence 57899999999999 7899999999999987 899988744 33443 46777654
No 67
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.16 E-value=7.4e-10 Score=118.20 Aligned_cols=134 Identities=17% Similarity=0.174 Sum_probs=83.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCcCChHHHHHH---
Q 004695 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR--- 341 (736)
Q Consensus 265 ~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~--- 341 (736)
-++|.|.|.|++. +++|+|+++|+|+++. |+++.+++.+..+-+.+ .-+++-.|..+.+.+....+.+...
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~-~~~~~~~p~~yl~~~~~~~~~~~~~~~~ 147 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKN-PNAFLVYPCLYLSEEGSEKFYSQFKNLW 147 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcC-CCceEEEeeeeccchhhHHHhhcchhcc
Confidence 4899999999999 8999999999999998 99999999832110001 2244445665554322222211110
Q ss_pred --HHHHHHHHH-hhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhH
Q 004695 342 --SAYCVQWQG-MDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 418 (736)
Q Consensus 342 --~f~~~~~~g-~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 418 (736)
.+.+....+ .+.++....+|+..+++|+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~---------------------------------------------- 181 (281)
T PF10111_consen 148 DHEFLESFISGKNSLWEFIAFASSCFLINREDFL---------------------------------------------- 181 (281)
T ss_pred hHHHHHHHhhccccccccccccceEEEEEHHHHH----------------------------------------------
Confidence 011111111 1222223345566677888774
Q ss_pred hhhcccccccccccccccccccccCCC---ccchHHHHHHHHHcCCeEEEeCC
Q 004695 419 EETGVLASCSYEHQTKWGEEVGILYQS---VSEDLFTGFILHCKGWTSTYLTP 468 (736)
Q Consensus 419 ~~~~~v~~c~ye~~t~~g~~~G~~~~s---ltED~~t~~rl~~~Gwrsvy~~~ 468 (736)
+.+||++.- =.||++.+.||...|.+..++++
T Consensus 182 ------------------~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 182 ------------------EIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred ------------------HhCCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 245676542 36999999999999999887764
No 68
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.16 E-value=3.5e-10 Score=132.97 Aligned_cols=166 Identities=19% Similarity=0.230 Sum_probs=113.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCCcCCh---HHHHH
Q 004695 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDI---YDGRF 340 (736)
Q Consensus 265 ~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n~~~~d~---~~~~~ 340 (736)
+.|-=.+|.+....+ .+-++|+.+|+|+.+. |+++.+++.-|. || +||-+.+ +..|. .+. +.+..
T Consensus 424 ~~~r~~~y~~~~~L~--~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp----~VggaCG--~I~~~--~~~w~v~~Q~F 492 (862)
T KOG2571|consen 424 NQHRWVMYTAFKALM--PSVDYILVVDADTRLD-PDALYHLVKVFDEDP----QVGGACG--RILNK--GGSWVVAYQNF 492 (862)
T ss_pred HHHHHHHHHHHHHhc--CcceEEEEecCCCccC-cHHHHHHHHHhccCc----ccceecc--ccccC--CCceEEeHHHH
Confidence 445556666666533 5667999999999998 999999999886 66 5777766 33332 221 22333
Q ss_pred HHH-HHHHHHHhhhcCCcccccccc--eeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhh
Q 004695 341 RSA-YCVQWQGMDGLKGPVLSGTGY--YIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 417 (736)
Q Consensus 341 ~~f-~~~~~~g~d~~~g~~~~Gtg~--~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~ 417 (736)
+.. -...++.-+..-|-+.|=.|| +||-+||.+.. .+.++|..
T Consensus 493 EY~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~---------~~~~y~~~------------------------- 538 (862)
T KOG2571|consen 493 EYAISHNLQKATESVFGCVSCLPGCFSLYRASALMDQF---------VEYFYGEK------------------------- 538 (862)
T ss_pred HHHHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcch---------HHhhhchh-------------------------
Confidence 322 223455666666666665565 69999997511 11122210
Q ss_pred HhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhhhhccc
Q 004695 418 QEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 494 (736)
Q Consensus 418 ~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 494 (736)
.-|..-|..+ +..||=.+..++..+||+.-|+.. +.+..++|+++.+++.||+||..|
T Consensus 539 ----------------~~~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 539 ----------------FSGPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ----------------hcCccccccc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 0000113333 389999999999999999999985 899999999999999999999999
No 69
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.11 E-value=2.1e-09 Score=115.99 Aligned_cols=121 Identities=17% Similarity=0.225 Sum_probs=90.7
Q ss_pred CCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcc
Q 004695 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (736)
-|.+.++|+| ||-. +.+.+++.++.+++||. ..++++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~---yn~~-~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVT---YNRG-EDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEe---cCCH-HHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHHHHhh----------------------
Confidence 3789999999 9988 88999999999999997 345589999999765322110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEE
Q 004695 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (736)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~y 253 (736)
..|++.+
T Consensus 54 -------------------------------------------------------------------------~~~~v~~ 60 (305)
T COG1216 54 -------------------------------------------------------------------------FFPNVRL 60 (305)
T ss_pred -------------------------------------------------------------------------cCCcEEE
Confidence 0246778
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcc
Q 004695 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQK 326 (736)
Q Consensus 254 v~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~-~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~ 326 (736)
+.-.+ +.|=||+.|.+++... ++++ ++++++-|.+++ |++|.+++..+.+. +..+.|+....
T Consensus 61 i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~---~~~~~~~~~i~ 123 (305)
T COG1216 61 IENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVVE-PDLLEELLKAAEED---PAAGVVGPLIR 123 (305)
T ss_pred EEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhC---CCCeEeeeeEe
Confidence 76544 4778999999998832 3434 899999998887 99999999888632 25666654443
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.86 E-value=1.9e-08 Score=96.02 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=43.6
Q ss_pred CCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchh
Q 004695 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~ 146 (736)
.|.++|+||| |||+ ..+.++|.|++++.|+. .+|+|+|||++|.|.+
T Consensus 2 ~~~~siiip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 4889999999 9999 89999999999999997 7899999999998764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.83 E-value=2.5e-08 Score=102.80 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=39.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp 312 (736)
..+++.+.|.|+.. +.+|+|+++|+|.++. |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 46899999999999 8899999999999998 99999988887654
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.43 E-value=7.4e-07 Score=95.64 Aligned_cols=227 Identities=17% Similarity=0.209 Sum_probs=146.1
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (736)
..+|.|+|+-|--| ..| -+.+-+++-...+|| |+|...+=+.+.| +|.+..+
T Consensus 82 ~~LPgVSiikPl~G-~d~---nl~~Nlesffts~Y~--~~ElLfcv~s~eD-------pAi~vv~--------------- 133 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKG-VDP---NLYHNLESFFTSQYH--KYELLFCVESSED-------PAIEVVE--------------- 133 (431)
T ss_pred CCCCCceEEeeccc-CCc---hhHHhHHHHHhhccC--ceEEEEEEccCCC-------cHHHHHH---------------
Confidence 36899999999966 443 467889999999999 5999988777766 2221100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 004695 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
++-++| |++ + .-
T Consensus 134 ------------------------~Ll~ky----------------------p~V-d---------------------Ak 145 (431)
T KOG2547|consen 134 ------------------------RLLKKY----------------------PNV-D---------------------AK 145 (431)
T ss_pred ------------------------HHHhhC----------------------CCc-c---------------------eE
Confidence 111122 211 0 11
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEE-ccCcccccC
Q 004695 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV-QFPQKFHNI 330 (736)
Q Consensus 252 ~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~V-Q~Pq~f~n~ 330 (736)
+++.-++- | -+-|-.|+--|.+. ++.|+|++.|.|-... ||.+.++..-++.++ ++|+| |+|-.++ .
T Consensus 146 lf~gG~~v-g--~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~d-r 213 (431)
T KOG2547|consen 146 LFFGGEKV-G--LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKD-R 213 (431)
T ss_pred EEEccccc-c--cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeec-c
Confidence 34444432 2 34588888888888 8999999999999998 999999888887664 79988 4444333 2
Q ss_pred CcCChHHHHHHHHHHHHHHH----hhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhccc
Q 004695 331 NKYDIYDGRFRSAYCVQWQG----MDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQN 406 (736)
Q Consensus 331 ~~~d~~~~~~~~f~~~~~~g----~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~ 406 (736)
.. +-..-++ ++|...++. -+-.+-....|-.|+.|+++|+.
T Consensus 214 ~G-f~atle~-~~fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~ld~--------------------------------- 258 (431)
T KOG2547|consen 214 QG-FDATLEQ-VYFGTSHPRIYLSGNVLGFNCSTGMSSMMRKEALDE--------------------------------- 258 (431)
T ss_pred cc-chhhhhh-eeeccCCceEEEccccccccccccHHHHHHHHHHHH---------------------------------
Confidence 11 1111111 334332221 11112223345556788888752
Q ss_pred CCCCCCchhhhHhhhccccccccccccccccccccc--CCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHH
Q 004695 407 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVGIL--YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDL 484 (736)
Q Consensus 407 ~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~--~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~ 484 (736)
++|+. .+.+.||...+=.+..+||++.+... ++-...+-.+...+
T Consensus 259 -------------------------------~ggi~~f~~yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf 305 (431)
T KOG2547|consen 259 -------------------------------CGGISAFGGYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSF 305 (431)
T ss_pred -------------------------------hccHHHHHHHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHH
Confidence 23322 34689999999999999999999873 55556666788888
Q ss_pred hhhhhhhccc
Q 004695 485 LIQGTRWGSG 494 (736)
Q Consensus 485 ~~Qr~RWa~G 494 (736)
..|-.||..=
T Consensus 306 ~~Ri~rwvkL 315 (431)
T KOG2547|consen 306 LDRIIRWVKL 315 (431)
T ss_pred HHHHHHhhhh
Confidence 8888888653
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.16 E-value=1.8e-05 Score=77.92 Aligned_cols=105 Identities=15% Similarity=0.118 Sum_probs=65.4
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccc
Q 004695 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (736)
Q Consensus 249 p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~Pq~f~ 328 (736)
+++....|.+ .-|=.-|--+++.+ +.|+|+++.|||---+ |.++-+.+....+- +..+|-+- +|.
T Consensus 63 d~i~l~pR~~-----klGLgtAy~hgl~~----a~g~fiviMDaDlsHh-Pk~ipe~i~lq~~~----~~div~GT-RYa 127 (238)
T KOG2978|consen 63 DNILLKPRTK-----KLGLGTAYIHGLKH----ATGDFIVIMDADLSHH-PKFIPEFIRLQKEG----NYDIVLGT-RYA 127 (238)
T ss_pred CcEEEEeccC-----cccchHHHHhhhhh----ccCCeEEEEeCccCCC-chhHHHHHHHhhcc----Ccceeeee-eEc
Confidence 3577777776 35677888999999 9999999999998865 99998887765432 45566433 222
Q ss_pred cCCcCChHHHHHHHHHHHHHHHhhh-------cCCcccccccceeeccccc
Q 004695 329 NINKYDIYDGRFRSAYCVQWQGMDG-------LKGPVLSGTGYYIKRESLY 372 (736)
Q Consensus 329 n~~~~d~~~~~~~~f~~~~~~g~d~-------~~g~~~~Gtg~~~RR~aL~ 372 (736)
.. ...++ ..+.-++|.+|.+- .+..-..|+--.+|++.|.
T Consensus 128 ~~--ggV~g--W~mkRk~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~ 174 (238)
T KOG2978|consen 128 GG--GGVYG--WDMKRKIISRGANFLARILLNPGVSDLTGSFRLYKKEVLE 174 (238)
T ss_pred CC--Cceec--chhhHHHHhhhhHHHHHHhccCCCccCcceeeeehHHHHH
Confidence 11 11111 11222333333222 2333457777788888884
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.05 E-value=2.5e-05 Score=81.60 Aligned_cols=108 Identities=21% Similarity=0.174 Sum_probs=75.4
Q ss_pred cEEEEEecCCCCCCch---HHHHHHHHHHHcCCCCC---CceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCccc
Q 004695 96 AIDVFICTADPEKEPA---IGVMNTVLSAMALDYPV---DKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (736)
Q Consensus 96 ~VdV~Vpt~~pynEp~---~~v~~Tv~s~~~~dYP~---~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (736)
-.+|+||+ |||+- .++.+|+..+. -.|-. =+.+|+|+|||+.|.|.+.. +.||+|+|.+
T Consensus 68 ~lsVIVpa---ynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~d- 132 (323)
T KOG2977|consen 68 YLSVIVPA---YNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGDD- 132 (323)
T ss_pred eeEEEEec---CCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCcc-
Confidence 68999999 99982 23444444432 24443 37899999999999886532 2466676631
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCC
Q 004695 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p 249 (736)
T Consensus 133 -------------------------------------------------------------------------------- 132 (323)
T KOG2977|consen 133 -------------------------------------------------------------------------------- 132 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCC--CCCchHHHHHHHH
Q 004695 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM--YCNDPTSARQAMC 307 (736)
Q Consensus 250 ~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~--~~~~p~~L~~~v~ 307 (736)
++..+.-.+ +.||.||..-++-+ +.|+++++.|||- ...|-+.|.+++.
T Consensus 133 ~irV~~l~~-----nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~ 183 (323)
T KOG2977|consen 133 NIRVIKLKK-----NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALN 183 (323)
T ss_pred eEEEeehhc-----cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHH
Confidence 244444433 47899999999998 8999999999994 3444566777665
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.80 E-value=0.00023 Score=77.77 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=36.8
Q ss_pred EEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004695 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (736)
Q Consensus 97 VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~ 143 (736)
+-|+|.| ||-| +.+++||.|++++.+-.+..+|+|++||+++.
T Consensus 2 ~PVlv~a---yNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~ 44 (334)
T cd02514 2 IPVLVIA---CNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE 44 (334)
T ss_pred cCEEEEe---cCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH
Confidence 3588999 9997 89999999999987445678999999999873
No 76
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=96.66 E-value=0.042 Score=65.91 Aligned_cols=192 Identities=20% Similarity=0.222 Sum_probs=116.0
Q ss_pred ccCCCCCC--CCChHHHHHHHHHhcCCCCCCCEEEEeCC--CCCCCchHHH--HHHHHhhcCCCC--------------C
Q 004695 256 REKRPEHL--HHFKAGALNVLLRVSGVISNSPYILGLDC--DMYCNDPTSA--RQAMCFHLDPKI--------------S 315 (736)
Q Consensus 256 Rekrp~~~--~~~KAGaLN~aL~~s~~~s~g~~Il~lDA--D~~~~~p~~L--~~~v~~f~Dp~~--------------~ 315 (736)
|-|=||.+ ..||.-|-|+|+=. ++||++=.+|+ |.+.+ +.| |.++.-|.+.+. .
T Consensus 263 ri~LpG~pilGeGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYle--E~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~ 336 (817)
T PF02364_consen 263 RIKLPGNPILGEGKPENQNHAIIF----TRGEYLQTIDMNQDNYLE--EALKMRNLLEEFEEMHGDSSSPYIPGIEEEGK 336 (817)
T ss_pred EEECCCCCcCCCCCccccceeEEE----EccccccccccchhhhHH--HHHHHHHHHHHHHhcCCCCCCCCCCCccccCC
Confidence 44556555 47899999999988 99999999999 56654 343 455555543211 2
Q ss_pred CcEEEEccCcccccCCcC---ChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCc
Q 004695 316 SSLAFVQFPQKFHNINKY---DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKS 392 (736)
Q Consensus 316 ~~vg~VQ~Pq~f~n~~~~---d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~ 392 (736)
..++.|-++-+....+-+ |-.+.+-..|--..++-+...++ +=+||++
T Consensus 337 ~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~-----------------------------rlHYGHP 387 (817)
T PF02364_consen 337 RPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPLV-----------------------------RLHYGHP 387 (817)
T ss_pred CCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcchh-----------------------------hccCCCc
Confidence 456777666655533211 22222222333333333222111 2256666
Q ss_pred hhhhhhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccc----cCCCccchHHHHHHHHHcCCeEEEeCC
Q 004695 393 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGI----LYQSVSEDLFTGFILHCKGWTSTYLTP 468 (736)
Q Consensus 393 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~----~~~sltED~~t~~rl~~~Gwrsvy~~~ 468 (736)
+.| +.+.-.-+ ||. ..-+++||+.-|+.-..+|-++.+|.
T Consensus 388 D~~-n~~f~~TR----------------------------------GGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~e- 431 (817)
T PF02364_consen 388 DVF-NRIFMTTR----------------------------------GGVSKASKGLHLSEDIFAGMNATLRGGRIKHCE- 431 (817)
T ss_pred hhh-hhhheecc----------------------------------CccchHhhcccccHHHHHHHHHHhcCCceeehh-
Confidence 532 22221111 121 23479999999999999999999986
Q ss_pred CCCeeEeecCC-ChHHHhhhhhhhccccccccccccCCcccCCCCCChhhHHHHh
Q 004695 469 FRPQFLGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYG 522 (736)
Q Consensus 469 ~~~~~~g~aP~-tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~y~ 522 (736)
-..+|-.-+ .+.+-..=-.+-+.|+-|..+||.--.+ | .+|.+..-+.+.
T Consensus 432 --y~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrL-g-~~ld~~R~LSfy 482 (817)
T PF02364_consen 432 --YIQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRL-G-TRLDFFRFLSFY 482 (817)
T ss_pred --hhhcccccccCchhhhhhHhHhcCCccchhhhHHHHHh-h-ccCCHHHHHHHH
Confidence 566666554 5666666667889999999998742222 2 577776666543
No 77
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.33 E-value=0.013 Score=63.94 Aligned_cols=49 Identities=24% Similarity=0.185 Sum_probs=41.1
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~ 142 (736)
++++|+++|+|.- +||.-..+++||.|++.-.=|.---+|+++||-++.
T Consensus 151 pe~Lpt~SVviVF---HNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVF---HNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEE---ecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 5789999999999 999999999999999876644435678888887764
No 78
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.83 E-value=0.02 Score=62.70 Aligned_cols=49 Identities=22% Similarity=0.179 Sum_probs=43.4
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~ 143 (736)
.++|+-+|+|+- +||....+.+||.|+++..=++=-.+|+++||++.|.
T Consensus 121 ~dlp~TsviITf---HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITF---HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEe---ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 568999999999 9999999999999999987444367999999999985
No 79
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.53 E-value=0.012 Score=68.26 Aligned_cols=112 Identities=21% Similarity=0.120 Sum_probs=82.8
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (736)
+.+|+++|+|+- +||...++.+||.|+....=|.--.+|+++||+++..-.
T Consensus 139 ~~Lp~~Svii~f---~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l-------------------------- 189 (578)
T KOG3736|consen 139 DKLPTTSVIIIF---HNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHL-------------------------- 189 (578)
T ss_pred cccCCCceEEEE---ecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhh--------------------------
Confidence 458999999999 999999999999998887744446789999999876210
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHH-HHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 004695 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEM-FEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee-~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
++.-|+ ++. ++.
T Consensus 190 --------------------------~~~Ld~y~k~-----------------------------------------~~~ 202 (578)
T KOG3736|consen 190 --------------------------KDKLEEYVKR-----------------------------------------FSK 202 (578)
T ss_pred --------------------------hhhhHHHHhh-----------------------------------------hcc
Confidence 011111 111 112
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004695 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 251 l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.++..++ +.|+-.|.+.|-+. +.||+++++||-+-++ ...|.-++.--
T Consensus 203 v~i~r~~~-----R~GLIrARl~GA~~----A~geVL~FLDsHcE~n-~gWLePLL~~I 251 (578)
T KOG3736|consen 203 VRILRTKK-----REGLIRARLLGASM----ATGEVLTFLDSHCEVN-VGWLEPLLARI 251 (578)
T ss_pred eeEEeecc-----hhhhHHHHhhhhhh----hhchheeeeecceeEe-cCcchHHHHHh
Confidence 45555555 46788899999888 8999999999999988 68888777644
No 80
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=94.94 E-value=0.075 Score=47.05 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=28.6
Q ss_pred CCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchh
Q 004695 107 EKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (736)
Q Consensus 107 ynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~ 146 (736)
+||+ ..+...|..-+++.+- ++||.|||++|.|.+
T Consensus 1 rne~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTRE 35 (97)
T ss_pred CChH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHH
Confidence 4787 6899999998888764 489999999997753
No 81
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=93.10 E-value=0.26 Score=50.92 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=38.7
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEE
Q 004695 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFV 321 (736)
Q Consensus 265 ~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~Dp~~~~~vg~V 321 (736)
..-|.+.|.|++. ++++|++.+.-|..+.+++++.+++..| .|| ++|.+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 4578899999999 8999999999999998899999999999 777 46555
No 82
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=92.06 E-value=1.6 Score=45.25 Aligned_cols=53 Identities=13% Similarity=-0.166 Sum_probs=36.0
Q ss_pred cchHHHHHHHHHcCCeEEEeCCCCC----------eeEeecCCChHHHhhhhhhhcccccccc
Q 004695 447 SEDLFTGFILHCKGWTSTYLTPFRP----------QFLGTSTTNLNDLLIQGTRWGSGLTDVG 499 (736)
Q Consensus 447 tED~~t~~rl~~~Gwrsvy~~~~~~----------~~~g~aP~tl~~~~~Qr~RWa~G~~qi~ 499 (736)
.||-+.+.||..+|.+......... .-....|.-+.....++.||+...+.-+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 5999999999999988765543100 0023345556667778888988877654
No 83
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=90.95 E-value=4.7 Score=51.02 Aligned_cols=85 Identities=21% Similarity=0.246 Sum_probs=53.2
Q ss_pred CCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCC-ChHHHhhhhhhhccccccccccccCCcccCCCCCChhhHHH-H
Q 004695 444 QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMC-Y 521 (736)
Q Consensus 444 ~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~-tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~-y 521 (736)
-.+.||+.-|+.-..+|-++.+|. -...|-.-+ .+.+-..=-..-+.|+-|..+||.- ...| .++.+..-|. |
T Consensus 1172 inlsEDIfAG~n~tlRgG~itH~E---YiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~-YrLG-~~ldffRmLSfy 1246 (1679)
T KOG0916|consen 1172 INLSEDIFAGFNATLRGGNITHHE---YIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDY-YRLG-TQLDFFRMLSFY 1246 (1679)
T ss_pred cccchHhhhhhhHHhhCCCcccce---eeecccccccCcchhhhhhhhhcCCCcchhhhHHH-HHhc-ccccHHHHHHHH
Confidence 478999999999999999998885 444443322 3333344445678999998888641 1223 4676655554 4
Q ss_pred hhHhhhhHHhHHH
Q 004695 522 GELSFFPLLYCLP 534 (736)
Q Consensus 522 ~~~~~~~~l~~~~ 534 (736)
..+.-++ ++.+.
T Consensus 1247 ftt~GF~-~n~m~ 1258 (1679)
T KOG0916|consen 1247 FTTVGFY-FNNMF 1258 (1679)
T ss_pred hccccHH-HHhHH
Confidence 3333333 55554
No 84
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=85.14 E-value=9.3 Score=42.21 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=31.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHH
Confidence 5789988887764421 1467999999999997 57777755444
No 85
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=84.65 E-value=3.3 Score=47.12 Aligned_cols=48 Identities=25% Similarity=0.378 Sum_probs=30.2
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCC-CCceEEEEEcCCCCccc
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYP-VDKLHVYLSDDGGSPIT 144 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP-~~kl~v~v~DDg~~~~T 144 (736)
...|.+-|+|-+ ||-| .-+.+||.++++.. | +++..|+|+.||+.+.|
T Consensus 90 ~~~~~~pVlV~A---cNRp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~ 138 (434)
T PF03071_consen 90 NKEPVIPVLVFA---CNRP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEV 138 (434)
T ss_dssp -------EEEEE---SS-T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHH
T ss_pred cCCCcceEEEEe---cCCc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHH
Confidence 446778888888 7788 88999999999987 6 46889999999998744
No 86
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=84.19 E-value=6.7 Score=41.88 Aligned_cols=53 Identities=11% Similarity=0.084 Sum_probs=38.2
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCC--ccchhhH
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGS--PITLHGM 148 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~--~~T~~~l 148 (736)
.+-|+|=|+.|-.| -. ..+.+=...+.+++||++++++-++-.-++ +.|.+.|
T Consensus 22 ~~~e~VLILtplrn---a~-~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l 76 (269)
T PF03452_consen 22 RNKESVLILTPLRN---AA-SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKIL 76 (269)
T ss_pred ccCCeEEEEEecCC---ch-HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHH
Confidence 45688999999844 22 468899999999999999999855444344 5454433
No 87
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=83.96 E-value=13 Score=39.44 Aligned_cols=80 Identities=20% Similarity=0.191 Sum_probs=40.9
Q ss_pred CCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcE-EEEccCcc
Q 004695 248 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSL-AFVQFPQK 326 (736)
Q Consensus 248 ~p~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~v-g~VQ~Pq~ 326 (736)
+|++.|+.-.. |. +--.-+-.-|+|...|-.-.++++|+++|+|++.. .|-..+.+..-.-.+...++ ++.--|..
T Consensus 61 ~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 35677775422 11 11112444566665522224689999999999987 45444444222100111123 44446777
Q ss_pred cccC
Q 004695 327 FHNI 330 (736)
Q Consensus 327 f~n~ 330 (736)
|-|-
T Consensus 138 ~LNk 141 (346)
T COG4092 138 HLNK 141 (346)
T ss_pred ecch
Confidence 7764
No 88
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=83.52 E-value=9.8 Score=41.82 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=31.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-++-.+. +...+||-++|||.+. |.++.+-+.-|
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~y 183 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIY 183 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHH
Confidence 5789988887765421 1467999999999997 57777655433
No 89
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=81.26 E-value=20 Score=39.62 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=27.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (736)
+.||+-.|=-|+-.+. +...+||-++|||.+. |.++.+-+.
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk 181 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVK 181 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHH
Confidence 5799999888775421 1567999999999996 788766443
No 90
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=77.53 E-value=19 Score=43.30 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=31.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~y 188 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHF 188 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHH
Confidence 5789988887775422 2577999999999997 57777655433
No 91
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=67.45 E-value=46 Score=32.98 Aligned_cols=52 Identities=12% Similarity=-0.000 Sum_probs=32.8
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHh
Q 004695 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 308 (736)
Q Consensus 251 l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~ 308 (736)
+.+.-.|+| .+|=..-.=....-+..-+.++++.+||-+.|. ++.|-++..-
T Consensus 111 ~ifclKe~N-----~kKinSHrWfFnaf~~~l~P~vcvllDvGT~P~-~~siy~Lwka 162 (163)
T PF01644_consen 111 IIFCLKEKN-----AKKINSHRWFFNAFCRQLQPNVCVLLDVGTKPG-KDSIYHLWKA 162 (163)
T ss_pred EEEEecccc-----ccccchhhHHHHHHHhhcCCcEEEEEecCCCcC-chHHHHHHhh
Confidence 455666664 445332222222222227899999999999998 8998776543
No 92
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=58.67 E-value=12 Score=40.89 Aligned_cols=46 Identities=26% Similarity=0.262 Sum_probs=32.8
Q ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEE
Q 004695 271 LNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 321 (736)
Q Consensus 271 LN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~V 321 (736)
-|.|+.. +..++|+++|+|++|. +++-+.+..+........+.++|
T Consensus 119 RNvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 119 RNVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 3777777 8899999999999998 67766655544322233456776
No 93
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=50.05 E-value=1.9e+02 Score=33.85 Aligned_cols=49 Identities=14% Similarity=0.139 Sum_probs=37.3
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHH
Q 004695 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 306 (736)
Q Consensus 250 ~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v 306 (736)
++.++..... .-.++.+|+.|++.. .+.+++.++|.|+..+ +++|.++-
T Consensus 315 ~i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rcR 363 (499)
T PF05679_consen 315 RIKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRCR 363 (499)
T ss_pred ceEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHHH
Confidence 3556655411 467999999999863 4667999999999998 89998743
No 94
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=49.83 E-value=40 Score=37.92 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=30.3
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004695 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 267 KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
....+-+|++. .+.|++++.|||+=.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 46778888887 44599999999964444899988877554
No 95
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=47.04 E-value=1.7e+02 Score=30.22 Aligned_cols=60 Identities=7% Similarity=-0.031 Sum_probs=40.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEcc
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQF 323 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ~ 323 (736)
.-+...++.+++.......+.++|++++||+=.-+++.+++++..|.+.+.+.-+..+..
T Consensus 75 ~~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 75 FTGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 345667777777652111246899999999987779999999988865323334555543
No 96
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=44.33 E-value=17 Score=31.37 Aligned_cols=30 Identities=17% Similarity=-0.142 Sum_probs=18.2
Q ss_pred ccccCCCc---cchHHHHHHHHHcCCeEEEeCC
Q 004695 439 VGILYQSV---SEDLFTGFILHCKGWTSTYLTP 468 (736)
Q Consensus 439 ~G~~~~sl---tED~~t~~rl~~~Gwrsvy~~~ 468 (736)
.||++.-. -||.+.+.|+..+|.+....+.
T Consensus 35 nGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 35 NGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp TSS-SS-TSCSSHHHHHHHHHHHTT---B-SST
T ss_pred CCCCccccccCccHHHHHHHHHHcCCeEEecCC
Confidence 35554433 3999999999999998776553
No 97
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=39.38 E-value=3e+02 Score=28.89 Aligned_cols=43 Identities=9% Similarity=-0.038 Sum_probs=28.6
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEe--CCCCCCCchHHHHHHHHhhc
Q 004695 266 FKAGALNVLLRVSGVISNSPYILGL--DCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 266 ~KAGaLN~aL~~s~~~s~g~~Il~l--DAD~~~~~p~~L~~~v~~f~ 310 (736)
....++..+++.... ..+++++.+ |.|--+. .|+++++-.+..
T Consensus 96 ~~~~~~~~~~~~~~~-~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 96 PHRDAMRRAINAARR-DGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred hHHHHHHHHHhhhcc-CCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 355777777743211 345655554 9988877 899998887764
No 98
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=35.39 E-value=1.3e+02 Score=33.73 Aligned_cols=67 Identities=12% Similarity=0.167 Sum_probs=43.9
Q ss_pred CCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004695 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (736)
.-|+|+.+-|+ .|+++.+-.+-++++. +.-|+ +++.++|.+.++.--.... +|++-++|.|
T Consensus 342 s~~~V~L~Y~~---~n~e~~~y~~eLr~~~-qkl~~--~~lHiiDSs~~g~l~~e~l-------------er~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCS---RNWEEALYAEELRALA-QKLPN--VVLHIIDSSKDGYLDQEDL-------------ERYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEe---cCCchhHHHHHHHHHH-hcCCC--eEEEEecCCCCCccCHHHh-------------hccccccCcc
Confidence 56899999999 8888677777777654 44465 6777766665553222111 2456667777
Q ss_pred cccccc
Q 004695 173 QAYFSE 178 (736)
Q Consensus 173 ~~yf~~ 178 (736)
..||=.
T Consensus 403 sv~fCG 408 (438)
T COG4097 403 SVFFCG 408 (438)
T ss_pred eEEEEc
Confidence 878744
No 99
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=29.74 E-value=1.5e+02 Score=31.24 Aligned_cols=29 Identities=28% Similarity=0.354 Sum_probs=22.6
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004695 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 282 s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp 312 (736)
++.+.++.+|-|++++ ++-|++.+.-| ||
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~-~~ 113 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY-DP 113 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS--T
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC-CC
Confidence 4679999999999998 89998888766 55
No 100
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=28.92 E-value=1.5e+02 Score=28.49 Aligned_cols=44 Identities=14% Similarity=0.035 Sum_probs=34.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHhhc
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~-~~~~p~~L~~~v~~f~ 310 (736)
..+-++++..|++... .+.|.+++++||+ .++ ++.+++++..+.
T Consensus 73 ~~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 117 (186)
T cd04182 73 EEGMSSSLAAGLEALP--ADADAVLILLADQPLVT-AETLRALIDAFR 117 (186)
T ss_pred hhCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCC-HHHHHHHHHHHH
Confidence 3577888999998832 1378999999999 445 889988887665
No 101
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=28.85 E-value=2e+02 Score=28.99 Aligned_cols=45 Identities=16% Similarity=0.085 Sum_probs=33.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHhhcC
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~-~~~~p~~L~~~v~~f~D 311 (736)
..+.++++-+|+.... .+.+.+++++||+ ... ++.+.+++..+.+
T Consensus 72 ~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 72 QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 3578999999998732 1268899999999 344 7888888877653
No 102
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=27.55 E-value=2.2e+02 Score=32.41 Aligned_cols=36 Identities=28% Similarity=0.091 Sum_probs=28.3
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004695 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 267 KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (736)
|--|+|.|=.- -++||++.|+|.++.++|.|.-.+.
T Consensus 98 Keea~~~~r~~-----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 98 KEEALNWARSG-----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHhh-----hcceeEEeehhheeeCCchHhHHHh
Confidence 56677776553 4699999999999998999876554
No 103
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=26.31 E-value=1.2e+02 Score=33.90 Aligned_cols=35 Identities=34% Similarity=0.461 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 004695 269 GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (736)
Q Consensus 269 GaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~ 305 (736)
.+|+..++..+ +..+|+|++-|.|.+|+ |+.|+.+
T Consensus 165 ~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~L 199 (356)
T PF04724_consen 165 NALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKFL 199 (356)
T ss_pred HHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHHH
Confidence 45555555444 36899999999999997 8887554
No 104
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=26.26 E-value=1.3e+02 Score=29.41 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=34.2
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHhhc
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~-~~~~p~~L~~~v~~f~ 310 (736)
..+-.+++-.|++. .+.+.+++++||+ .++ ++.+++++..+.
T Consensus 72 ~~g~~~si~~al~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 114 (186)
T TIGR02665 72 FPGPLAGILAGLRW----AGTDWVLTVPCDTPFLP-EDLVARLAAALE 114 (186)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEecCCCcCC-HHHHHHHHHHhh
Confidence 35778888889987 4678999999999 555 899999887764
No 105
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=25.40 E-value=3.1e+02 Score=31.97 Aligned_cols=41 Identities=17% Similarity=0.330 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHHHHhhh
Q 004695 693 LIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSI 733 (736)
Q Consensus 693 ~~~l~p~l~al~~rk~k~~~p~~~~~~~~~~~~~~~~~~~~ 733 (736)
+++|..=.-|++.|+.+..+|.+-+..+.+++++|.+..++
T Consensus 141 LliLlig~WAlf~R~~~a~lPRif~fRa~ll~Lvfl~~~sy 181 (505)
T PF06638_consen 141 LLILLIGTWALFFRRPRADLPRIFVFRALLLVLVFLFLFSY 181 (505)
T ss_pred HHHHHHHHHHHhcCcccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 33444444567789999999999999999999998876554
No 106
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=24.93 E-value=2.5e+02 Score=27.18 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=34.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
..+-.+.+..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 45778999999998 5689999999999543489998888766
No 107
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=20.61 E-value=3.5e+02 Score=27.17 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=33.5
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004695 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 265 ~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
.|-.+++-.|++. .+.+.+++++||+-.-+++.+++++....
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4566788888887 56799999999997666899988887654
No 108
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=20.29 E-value=2.5e+02 Score=27.19 Aligned_cols=43 Identities=14% Similarity=-0.039 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004695 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 265 ~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
.+-++++-.|++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 4567788888872 146789999999994333899999887664
No 109
>COG3548 Predicted integral membrane protein [Function unknown]
Probab=20.10 E-value=9.6e+02 Score=24.64 Aligned_cols=69 Identities=7% Similarity=0.091 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC------Cc--chHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHH
Q 004695 652 LVPMVSLMILNMAALLCGFIRIIAVG------NW--DKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVF 723 (736)
Q Consensus 652 ~~p~~~l~~l~l~a~~~g~~r~~~~~------~~--~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~~p~~~~~~~~~~ 723 (736)
+.|.+...+++.+ +++.+....+. .. .-...|.+|.++ +.+.||.-+..++.--...|....+...++
T Consensus 49 l~~~l~~Y~lSF~--~v~~~W~n~h~~f~~ikki~~~i~~~N~i~L~~--vsLlPfsT~~~~~~~~~~~~~~~~~~~l~l 124 (197)
T COG3548 49 LLSSLIIYALSFL--VVAIFWFNHHRIFGRIKKITGRIIWINFIWLLL--VSLLPFSTAWIGEIHTDFLPALLYLVLLLL 124 (197)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcccchhhHHHHHHHH--HHHHHHHHHHHhcccCCcccHHHHHHHHHH
Confidence 4566666666655 23333333211 11 123566666655 789999999998766677777776665444
Q ss_pred H
Q 004695 724 F 724 (736)
Q Consensus 724 ~ 724 (736)
.
T Consensus 125 ~ 125 (197)
T COG3548 125 I 125 (197)
T ss_pred H
Confidence 3
Done!