Query 004695
Match_columns 736
No_of_seqs 323 out of 1984
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 02:53:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004695.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004695hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 2.5E-55 8.6E-60 526.2 50.5 506 19-711 65-581 (802)
2 2z86_A Chondroitin synthase; G 99.8 1.7E-18 5.8E-23 201.4 17.3 211 93-483 91-337 (625)
3 3bcv_A Putative glycosyltransf 99.8 1.1E-18 3.8E-23 176.9 12.4 109 93-311 3-111 (240)
4 1xhb_A Polypeptide N-acetylgal 99.8 4.9E-18 1.7E-22 191.1 16.7 114 91-310 25-140 (472)
5 1qg8_A Protein (spore coat pol 99.7 4.9E-18 1.7E-22 174.0 9.9 218 95-494 1-235 (255)
6 2d7i_A Polypeptide N-acetylgal 99.7 1.5E-16 5E-21 183.9 16.1 115 91-311 108-223 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.7 1E-16 3.5E-21 182.0 14.3 112 91-311 62-173 (501)
8 2z86_A Chondroitin synthase; G 99.7 1.7E-16 5.8E-21 184.6 12.0 221 93-499 373-598 (625)
9 3ckj_A Putative uncharacterize 99.6 1.4E-15 4.7E-20 163.7 13.1 122 92-324 45-169 (329)
10 4fix_A UDP-galactofuranosyl tr 99.5 5.1E-14 1.8E-18 165.0 13.2 124 93-322 178-303 (657)
11 3l7i_A Teichoic acid biosynthe 99.5 1.8E-15 6.2E-20 179.5 0.0 110 95-312 2-111 (729)
12 2fy7_A Beta-1,4-galactosyltran 99.4 5.2E-13 1.8E-17 141.4 10.4 62 438-499 189-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 99.4 2.5E-12 8.4E-17 141.7 14.9 120 94-323 93-216 (387)
14 2nxv_A ATP synthase subunits r 99.1 1.1E-09 3.9E-14 112.8 14.6 46 267-321 62-112 (249)
15 2bo4_A Mannosylglycerate synth 98.7 2.5E-07 8.6E-12 102.0 17.3 42 264-310 73-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 98.0 3.3E-05 1.1E-09 84.5 13.0 38 264-307 142-182 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 97.9 2E-05 6.7E-10 84.5 9.1 44 93-145 51-94 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 97.7 4.1E-05 1.4E-09 82.7 8.0 46 94-144 1-46 (343)
19 3lw6_A FI08434P, beta-4-galact 89.9 1.1 3.6E-05 46.7 9.3 53 447-499 185-250 (287)
20 3q80_A 2-C-methyl-D-erythritol 37.3 64 0.0022 32.0 7.1 45 267-311 83-127 (231)
21 3d5n_A Q97W15_sulso; NESG, SSR 33.5 77 0.0026 30.1 6.8 41 265-309 71-112 (197)
22 2j0a_A Beta-1,3-N-acetylglucos 25.4 77 0.0026 32.4 5.5 30 282-313 92-121 (280)
23 2xwl_A 2-C-methyl-D-erythritol 22.1 1.1E+02 0.0037 29.2 5.6 41 266-309 78-118 (223)
24 2y6p_A 3-deoxy-manno-octuloson 21.6 1E+02 0.0034 29.7 5.3 42 264-311 71-113 (234)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.5e-55 Score=526.21 Aligned_cols=506 Identities=20% Similarity=0.272 Sum_probs=378.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCCCcE
Q 004695 19 INRLHALLHCIAIGFLIYYRASYLLQET-RAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI 97 (736)
Q Consensus 19 ~~R~~~~~~~~~~~~yl~wR~~~~~~~~-~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V 97 (736)
+..+++++.+++.+.|++||++.+++.. .+.+.++|++++++|++..+.|++..+..++|..|...++. .+++.|+|
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~V 142 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPTV 142 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCCE
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCcE
Confidence 3344444445557779999999999853 35677889999999999999999999999999888755542 25678999
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004695 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (736)
Q Consensus 98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (736)
+|+||| |||+++++++|+.|+++++||.++++|+|+|||++|.|.+.
T Consensus 143 SViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------ 189 (802)
T 4hg6_A 143 DILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------ 189 (802)
T ss_dssp EEEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------------
T ss_pred EEEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc------------------------------
Confidence 999999 99998888999999999999999999999999999987531
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 004695 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (736)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv~Re 257 (736)
.+++.+++..+..+..+++..+ .++.|+.|+
T Consensus 190 --------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~~ 220 (802)
T 4hg6_A 190 --------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTRE 220 (802)
T ss_dssp --------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEECS
T ss_pred --------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEec
Confidence 1122323222111111221111 136788887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCCcC---
Q 004695 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKY--- 333 (736)
Q Consensus 258 krp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n~~~~--- 333 (736)
++ +++|+||+|.|++. ++||||+++|||++++ ||+|++++.+|. || ++++||+++.+.|.++.
T Consensus 221 ~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~ 287 (802)
T 4hg6_A 221 RN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRN 287 (802)
T ss_dssp SC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHH
T ss_pred CC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhh
Confidence 64 68999999999999 8999999999999998 999999999994 66 59999999999875311
Q ss_pred ----ChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCC
Q 004695 334 ----DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNAN 409 (736)
Q Consensus 334 ----d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~ 409 (736)
+.+.++...++...+.+.+.+++++++|+++++||++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~------------------------------------- 330 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD------------------------------------- 330 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH-------------------------------------
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH-------------------------------------
Confidence 122234567889999999999999999999999999995
Q ss_pred CCCchhhhHhhhcccccccccccccccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCCChHHHhhhhh
Q 004695 410 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 489 (736)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~tl~~~~~Qr~ 489 (736)
+.+||++++++||.+++++++++||++.|+++ +.+++.+|+|+.++++||.
T Consensus 331 ---------------------------~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~ 381 (802)
T 4hg6_A 331 ---------------------------EAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRG 381 (802)
T ss_dssp ---------------------------HHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHH
T ss_pred ---------------------------HcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHH
Confidence 24579999999999999999999999999985 9999999999999999999
Q ss_pred hhccccccccccccCCcccCCCCCChhhHHHHhhHhhhhHHhHHHHHHHHHHHHHHHHcCCcccccccchhHHHHHHHHH
Q 004695 490 RWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFI 569 (736)
Q Consensus 490 RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~ 569 (736)
||++|.+|+++. ++|++. +++++.||++|+....++ +.+++.++++++|++++++|..++......+. ..++
T Consensus 382 RW~~G~~q~l~~-~~pl~~--~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~----~~~l 453 (802)
T 4hg6_A 382 RWATGMMQMLLL-KNPLFR--RGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVL----AYMP 453 (802)
T ss_dssp HHHHHHHHHHHH-SCTTSC--SSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHH----HHHH
T ss_pred HHHccHHHHHHH-hCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHH----HHHH
Confidence 999999999984 578775 789999999999998888 88899999999999999999988764322222 2233
Q ss_pred HHHHHHHHHH-HHhCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeeccc
Q 004695 570 SAICKHLQEV-ISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTS 648 (736)
Q Consensus 570 ~~~~~~ll~~-~~~g~~~~~~w~~~~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~ 648 (736)
++++...+.. ...+.....||... ++ +...++.+...+..++++++.+|+||+|+.+.+. +. .
T Consensus 454 p~~l~~~~~~~~~~~~~r~~~~~~l-~~----~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~~-----~ 517 (802)
T 4hg6_A 454 GYLAVSFLVQNALFARQRWPLVSEV-YE----VAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE------NY-----I 517 (802)
T ss_dssp HHHHHHHHHHHHHHTTTSCTTHHHH-HH----HHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------CC-----B
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHH-HH----HHHHHHHHHHHHHHHhCCCCCcceECCCCccccc------cc-----h
Confidence 3333222211 12233333455432 22 2233445555566778889999999999986543 11 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 004695 649 SMFLVPMVSLMILNMAALLCGFIRIIAVGN-WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGR 711 (736)
Q Consensus 649 s~l~~p~~~l~~l~l~a~~~g~~r~~~~~~-~~~~~~~~~~~~w~~~~l~p~l~al~~rk~k~~ 711 (736)
+.+++|++++++++++++++|++++..... ......+++|++++++.+.+.+.+.+.|+.+++
T Consensus 518 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~ 581 (802)
T 4hg6_A 518 SPIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRA 581 (802)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 256789999999999999999999875432 122334444444444444444444443444443
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.78 E-value=1.7e-18 Score=201.43 Aligned_cols=211 Identities=17% Similarity=0.147 Sum_probs=145.7
Q ss_pred CCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004695 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+||.|+++++||. .++|+|+|||++|.|.+.+.+ +.
T Consensus 91 ~~p~vsviIp~---~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~--------------~~------ 145 (625)
T 2z86_A 91 IIDGLSIVIPT---YNRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE--------------FE------ 145 (625)
T ss_dssp CCCCEEEEEEE---SSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT--------------TT------
T ss_pred cCCcEEEEEec---CCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHH--------------hh------
Confidence 35899999999 9998 89999999999999885 699999999999976422110 00
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 004695 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
..+++.
T Consensus 146 --------------------------------------------------------------------------~~~~i~ 151 (625)
T 2z86_A 146 --------------------------------------------------------------------------SLLNIK 151 (625)
T ss_dssp --------------------------------------------------------------------------TTSCEE
T ss_pred --------------------------------------------------------------------------hcCCeE
Confidence 002477
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCC
Q 004695 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (736)
Q Consensus 253 yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n~~ 331 (736)
|+.++++ .++|++|+|.|++. ++||+|+++|+|.++. |++|.+++..|. +| .+++|+..+.+.+..
T Consensus 152 ~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~~~g~~~~~~~~~ 218 (625)
T 2z86_A 152 YVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAPN-PLWVQSYMELLAVDD----NVALIGPRKYIDTSK 218 (625)
T ss_dssp EEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEEC-TTHHHHHHHHHHHCT----TEEEECCEEEECCTT
T ss_pred EEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCCCC-HHHHHHHHHHHhcCC----ceEEEEeeeeccCcc
Confidence 7776532 46899999999999 8999999999999997 999999999886 44 588887665444321
Q ss_pred cCChHHHHH---------------HHHHH------------HHHHHhhh---cCC--cccccccceeecccccccccccc
Q 004695 332 KYDIYDGRF---------------RSAYC------------VQWQGMDG---LKG--PVLSGTGYYIKRESLYADFTHTV 379 (736)
Q Consensus 332 ~~d~~~~~~---------------~~f~~------------~~~~g~d~---~~g--~~~~Gtg~~~RR~aL~~~~~~~~ 379 (736)
..+.... ..+.. ......+. ... ..++|++.++||+++.
T Consensus 219 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~------- 289 (625)
T 2z86_A 219 --HTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLF------- 289 (625)
T ss_dssp --CCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHH-------
T ss_pred --cchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHH-------
Confidence 0010000 00000 00000011 111 2367888888888884
Q ss_pred cchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhhHhhhcccccccccccccccccccccCCCc---cchHHHHHHH
Q 004695 380 NDISELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV---SEDLFTGFIL 456 (736)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sl---tED~~t~~rl 456 (736)
+.+||++... .||.++++|+
T Consensus 290 ---------------------------------------------------------~iGgfde~~~~~g~ED~dl~~Rl 312 (625)
T 2z86_A 290 ---------------------------------------------------------RAGWFDEEFTHWGGEDNEFGYRL 312 (625)
T ss_dssp ---------------------------------------------------------HHCCCCTTCSSCCCHHHHHHHHH
T ss_pred ---------------------------------------------------------HhCCCccccccCCcchhhhhhhH
Confidence 2356877654 5999999999
Q ss_pred HHcCCeEEEeCCCCCeeEeecCCChHH
Q 004695 457 HCKGWTSTYLTPFRPQFLGTSTTNLND 483 (736)
Q Consensus 457 ~~~Gwrsvy~~~~~~~~~g~aP~tl~~ 483 (736)
+.+||++.|+++ +.++-..|.+-..
T Consensus 313 ~~~G~~i~~~p~--~~v~H~~~~~~~~ 337 (625)
T 2z86_A 313 YREGCYFRSVEG--AMAYHQEPPGKEN 337 (625)
T ss_dssp HHTTCEEEECGG--GCEEEECCC----
T ss_pred HhCCceEEEccc--chhhccCCccccc
Confidence 999999999985 7777777766543
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.77 E-value=1.1e-18 Score=176.94 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=90.2
Q ss_pred CCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004695 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||+ ||++ +.+.++|.|+++++||. ++|+|+|||++|.|.+.+.+.+
T Consensus 3 ~~p~vsViIp~---yn~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~-------------------- 56 (240)
T 3bcv_A 3 LIPKVSVIVPI---YNVE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYA-------------------- 56 (240)
T ss_dssp CCCSEEEEEEE---SSCT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHH--------------------
T ss_pred CCCcEEEEEec---CCCH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHH--------------------
Confidence 35899999999 9998 89999999999999985 9999999999998754322110
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 004695 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
+ ..|++.
T Consensus 57 -----------------------------~--------------------------------------------~~~~i~ 63 (240)
T 3bcv_A 57 -----------------------------A--------------------------------------------QYPNIK 63 (240)
T ss_dssp -----------------------------H--------------------------------------------HCSSEE
T ss_pred -----------------------------h--------------------------------------------hCCCEE
Confidence 0 113577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004695 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 253 yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
++.. + +.|+++|.|.|++. ++||||+++|+|.++. |++|++++..+.+
T Consensus 64 ~i~~-~-----n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~~-~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 64 VIHK-K-----NAGLGMACNSGLDV----ATGEYVAFCDSDDYVD-SDMYMTMYNVAQK 111 (240)
T ss_dssp EEEC-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCCCC-TTHHHHHHHHHHH
T ss_pred EEEC-C-----CCChHHHHHHHHHH----cCCCEEEEECCCCcCC-HHHHHHHHHHHHh
Confidence 7752 2 47899999999999 8999999999999997 9999999998875
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.76 E-value=4.9e-18 Score=191.11 Aligned_cols=114 Identities=18% Similarity=0.065 Sum_probs=94.2
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc-chhhHHHHHHhhhcchhhhhhcCccc
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI-TLHGMREACRFAKWWLPFCRRYGIKT 169 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~-T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (736)
+++.|.|+|+||+ |||+.+.+.+||.|+++++||...++|+|+|||++|. |.+.+.+..
T Consensus 25 ~~~~p~vSVIIp~---yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~----------------- 84 (472)
T 1xhb_A 25 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYV----------------- 84 (472)
T ss_dssp CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHH-----------------
T ss_pred CcCCCCeEEEEEe---CCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHH-----------------
Confidence 3568999999999 9999789999999999999997678999999999984 543222110
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCC
Q 004695 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p 249 (736)
..+|
T Consensus 85 ----------------------------------------------------------------------------~~~~ 88 (472)
T 1xhb_A 85 ----------------------------------------------------------------------------KKLK 88 (472)
T ss_dssp ----------------------------------------------------------------------------HSSS
T ss_pred ----------------------------------------------------------------------------HHCC
Confidence 0123
Q ss_pred -cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004695 250 -LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (736)
Q Consensus 250 -~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (736)
++.++..++ +.|+++|+|.|++. ++||+|+++|+|.+++ |++|.+++..+.
T Consensus 89 ~~v~vi~~~~-----n~G~~~a~N~g~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~ 140 (472)
T 1xhb_A 89 VPVHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIK 140 (472)
T ss_dssp SCEEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHH
T ss_pred CcEEEEECCC-----CCChHHHHHHHHHh----ccCCeEEEECCCeEeC-ccHHHHHHHHHH
Confidence 477887655 36799999999999 8999999999999988 999999999886
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.73 E-value=4.9e-18 Score=174.02 Aligned_cols=218 Identities=11% Similarity=0.016 Sum_probs=139.6
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (736)
|.|+|+||+ |||+ +.+.+||.|+++++||. ++|+|+|||++|.|.+.+.+.+
T Consensus 1 p~vSViIp~---yn~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~---------------------- 52 (255)
T 1qg8_A 1 PKVSVIMTS---YNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFL---------------------- 52 (255)
T ss_dssp CCEEEEEEE---SSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGG----------------------
T ss_pred CeEEEEEEc---CCCH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHh----------------------
Confidence 789999999 9998 89999999999999995 9999999999996643211100
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 004695 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
..|++.|+
T Consensus 53 ------------------------------------------------------------------------~~~~i~~i 60 (255)
T 1qg8_A 53 ------------------------------------------------------------------------NDNRVRFY 60 (255)
T ss_dssp ------------------------------------------------------------------------GSTTEEEE
T ss_pred ------------------------------------------------------------------------hcCCEEEE
Confidence 01357777
Q ss_pred eccCCCC----CCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccc-
Q 004695 255 SREKRPE----HLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFH- 328 (736)
Q Consensus 255 ~Rekrp~----~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~- 328 (736)
..+.. + ..+.|+++|+|.|++. ++||||+++|+|.++. |++|.+++..+. +| ++++|.+.....
T Consensus 61 ~~~~~-~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~~ 130 (255)
T 1qg8_A 61 QSDIS-GVKERTEKTRYAALINQAIEM----AEGEYITYATDDNIYM-PDRLLKMVRELDTHP----EKAVIYSASKTYH 130 (255)
T ss_dssp ECCCC-SHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTEEEC-TTHHHHHHHHHHHCT----TCCEEEEEEEEEE
T ss_pred ecccc-cccccccccCHHHHHHHHHHH----cCCCEEEEeCCCCccC-hHHHHHHHHHHHhCC----CceEEEeceEEEE
Confidence 66510 0 0146899999999999 8999999999999998 999999999886 44 467776665444
Q ss_pred -cCCcCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccC
Q 004695 329 -NINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNN 407 (736)
Q Consensus 329 -n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~ 407 (736)
+.+.. ..... +.. .............|++.++||+++..
T Consensus 131 ~~~~~~-~~~~~----~~~-~~~~~~~~~~~~~~~~~~~rr~~~~~---------------------------------- 170 (255)
T 1qg8_A 131 LNENRD-IVKET----VRP-AAQVTWNAPCAIDHCSVMHRYSVLEK---------------------------------- 170 (255)
T ss_dssp EC---C-EEEEE----EEC-CCSCBSCCTTTSCGGGEEEETHHHHH----------------------------------
T ss_pred eCCCCc-chhhc----cCc-hHHHHHhhcCCCccceEEEEHHHHHh----------------------------------
Confidence 22111 00000 000 00001122334578888999999852
Q ss_pred CCCCCchhhhHhhhcccccccccccccccccc-cc------c-CCCccchHHHHHHHHHcCCeEEEeCCCCCeeEeecCC
Q 004695 408 ANGENFSNVLQEETGVLASCSYEHQTKWGEEV-GI------L-YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT 479 (736)
Q Consensus 408 ~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~-G~------~-~~sltED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~ 479 (736)
.+ || + .....||.+..+|+..+| +.+|+++ ....+-..+.
T Consensus 171 ------------------------------~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~-~~~~~r~~~~ 218 (255)
T 1qg8_A 171 ------------------------------VKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDE-ELDLNYITDQ 218 (255)
T ss_dssp ------------------------------HHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEE-EEEEEEEC--
T ss_pred ------------------------------hcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecC-cEEEEEEcCC
Confidence 12 34 2 224679999999999987 7888875 2444555677
Q ss_pred ChHHHh--hhhhhhccc
Q 004695 480 NLNDLL--IQGTRWGSG 494 (736)
Q Consensus 480 tl~~~~--~Qr~RWa~G 494 (736)
+..... +|+.||.+.
T Consensus 219 s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 219 SIHFQLFELEKNEFVRN 235 (255)
T ss_dssp ------------CTGGG
T ss_pred ccchhHHHHHHHHHHHh
Confidence 766655 445555443
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.69 E-value=1.5e-16 Score=183.89 Aligned_cols=115 Identities=16% Similarity=0.043 Sum_probs=94.5
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc-hhhHHHHHHhhhcchhhhhhcCccc
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT-LHGMREACRFAKWWLPFCRRYGIKT 169 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T-~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (736)
++..|.|+|+||+ |||+.+.+.+||.|+++++||...++|+|+|||++|.| .+.+.+.+
T Consensus 108 ~~~~P~vSVIIp~---yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~----------------- 167 (570)
T 2d7i_A 108 LETLPNTSIIIPF---HNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM----------------- 167 (570)
T ss_dssp ESSCCCEEEEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH-----------------
T ss_pred CCCCCCeEEEEEE---CCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH-----------------
Confidence 3568999999999 99987899999999999999975569999999999987 32211110
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCC
Q 004695 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (736)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p 249 (736)
...|
T Consensus 168 ----------------------------------------------------------------------------~~~~ 171 (570)
T 2d7i_A 168 ----------------------------------------------------------------------------ALFP 171 (570)
T ss_dssp ----------------------------------------------------------------------------TTST
T ss_pred ----------------------------------------------------------------------------HhCC
Confidence 0124
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004695 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 250 ~l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
++.++..++ +.|+++|+|.|++. ++||+|+++|+|.+++ |++|.+++..+.+
T Consensus 172 ~v~vi~~~~-----n~G~~~A~N~G~~~----A~gd~i~fLD~D~~~~-p~~L~~ll~~l~~ 223 (570)
T 2d7i_A 172 SVRILRTKK-----REGLIRTRMLGASV----ATGDVITFLDSHCEAN-VNWLPPLLDRIAR 223 (570)
T ss_dssp TEEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCSHHHHHHHHH
T ss_pred eEEEEECCC-----CCCHHHHHHHHHHh----cCCCEEEEEcCCcccc-ccHHHHHHHHHHh
Confidence 577886655 46899999999999 8999999999999997 9999999998864
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.69 E-value=1e-16 Score=181.96 Aligned_cols=112 Identities=15% Similarity=0.082 Sum_probs=93.4
Q ss_pred CCCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004695 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (736)
++..|.|+|+||+ |||+...+.+||.|++++.||...++|+|+|||++|.|...+.
T Consensus 62 ~~~~p~vSVIIp~---yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~--------------------- 117 (501)
T 2ffu_A 62 RVDLPATSVVITF---HNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL--------------------- 117 (501)
T ss_dssp CSSCCCEEEEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG---------------------
T ss_pred CcCCCCEEEEEEe---CcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH---------------------
Confidence 4568999999999 9999449999999999999997567999999999997632100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 004695 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
...|+
T Consensus 118 ---------------------------------------------------------------------------~~~~~ 122 (501)
T 2ffu_A 118 ---------------------------------------------------------------------------GKIEK 122 (501)
T ss_dssp ---------------------------------------------------------------------------GGBTT
T ss_pred ---------------------------------------------------------------------------hcCCC
Confidence 01245
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004695 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 251 l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
+.++..++ +.|+++|+|.|++. ++||+|+++|+|.+++ |++|.+++..+.+
T Consensus 123 v~vi~~~~-----n~G~~~A~N~G~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 123 VRVLRNDR-----REGLMRSRVRGADA----AQAKVLTFLDSHCECN-EHWLEPLLERVAE 173 (501)
T ss_dssp EEEEECSS-----CCHHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCHHHHHHHHHH
T ss_pred EEEEECCC-----CcCHHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHh
Confidence 78887665 46799999999999 8999999999999998 9999999988864
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.66 E-value=1.7e-16 Score=184.60 Aligned_cols=221 Identities=18% Similarity=0.162 Sum_probs=153.1
Q ss_pred CCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004695 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (736)
..|.|+|+||| |||+ +.+.+||.|+++++||. ++|+|+|||++|.|.+.+.+..
T Consensus 373 ~~~~vsiii~~---yn~~-~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~-------------------- 426 (625)
T 2z86_A 373 RVPLVSIYIPA---YNCS-KYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHY-------------------- 426 (625)
T ss_dssp SSCSEEEEEEE---SSCT-TTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHH--------------------
T ss_pred cCCeEEEEEeC---CCCH-HHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHH--------------------
Confidence 46899999999 9998 89999999999999986 9999999999998754322210
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 004695 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (736)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~ 252 (736)
...|++.
T Consensus 427 -------------------------------------------------------------------------~~~~~i~ 433 (625)
T 2z86_A 427 -------------------------------------------------------------------------ANHPRVR 433 (625)
T ss_dssp -------------------------------------------------------------------------TTCTTEE
T ss_pred -------------------------------------------------------------------------hhCCcEE
Confidence 0113567
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCC
Q 004695 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (736)
Q Consensus 253 yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~Pq~f~n~~ 331 (736)
++. ++ +.|+++|+|.|++. ++||||+++|+|.++. |+.|.+++..|. +| ++++|.+...+.+.+
T Consensus 434 ~~~-~~-----n~G~~~a~n~g~~~----a~g~~i~~ld~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~ 498 (625)
T 2z86_A 434 FIS-QK-----NKGIGSASNTAVRL----CRGFYIGQLDSDDFLE-PDAVELCLDEFRKDL----SLACVYTTNRNIDRE 498 (625)
T ss_dssp EEE-EC-----CCCHHHHHHHHHHH----CCSSEEEECCTTCEEC-TTHHHHHHHHHHHCT----TCSEEEEEEEEECTT
T ss_pred EEe-CC-----CCCHHHHHHHHHHh----cCCCEEEEECCCcccC-hhHHHHHHHHHHhCC----CeeEEEeeeEEECCC
Confidence 774 33 46899999999999 8999999999999997 999999998774 55 467776655444322
Q ss_pred cCChHHHHHHHHHHHHHHHhhhcCCcccccccceeecccccccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCC
Q 004695 332 KYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTVNDISELKDTFGKSNVLINSLHQSYKQNNANGE 411 (736)
Q Consensus 332 ~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~ 411 (736)
.. ...... .+. ....+......++|++.++||+++.
T Consensus 499 ~~-~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~r~~~~--------------------------------------- 534 (625)
T 2z86_A 499 GN-LISNGY--NWP--IYSREKLTSAMICHHFRMFTARAWN--------------------------------------- 534 (625)
T ss_dssp SC-EEEECC--CCS--SCCHHHHTTSCCCCSCEEEEHHHHT---------------------------------------
T ss_pred CC-EeccCc--ccc--cCCHHHHhhcccCCceEEEEHHHHH---------------------------------------
Confidence 11 000000 000 0001122344568888899999884
Q ss_pred CchhhhHhhhcccccccccccccccccccccCC-CccchHHHHHHHHHcCCeEEEeCCCCCeeE---eecCCChHHHhhh
Q 004695 412 NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTPFRPQFL---GTSTTNLNDLLIQ 487 (736)
Q Consensus 412 ~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~-sltED~~t~~rl~~~Gwrsvy~~~~~~~~~---g~aP~tl~~~~~Q 487 (736)
+.+||++. ...||.++.+|+..+| ++.|+++ +... .....+......|
T Consensus 535 -------------------------~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~--~~~~~r~h~~~~s~~~~~~~ 586 (625)
T 2z86_A 535 -------------------------LTEGFNESISNAVDYDMYLKLSEVG-PFKHINK--ICYNRVLHGENTSIKKLDIQ 586 (625)
T ss_dssp -------------------------TTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEE--EEEEEECC----CCSSHHHH
T ss_pred -------------------------HhCCCCCccCChHHHHHHHHHHHhC-CEEEeCC--cEEEEEECCCccchhhHHHH
Confidence 24567765 4679999999999999 8999975 5443 3344566666777
Q ss_pred hhhhcccccccc
Q 004695 488 GTRWGSGLTDVG 499 (736)
Q Consensus 488 r~RWa~G~~qi~ 499 (736)
+.+|.....+.+
T Consensus 587 ~~~~~~~~~~~l 598 (625)
T 2z86_A 587 KENHFKVVNESL 598 (625)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 777765544433
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.62 E-value=1.4e-15 Score=163.67 Aligned_cols=122 Identities=15% Similarity=0.008 Sum_probs=91.8
Q ss_pred CCCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004695 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 92 ~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (736)
..-|.|+|+||+ |||+ +.+.++|.|+++++||. ..+|+|+|||++|.|.+.+.+ ++.+
T Consensus 45 ~~~~~vSViIp~---yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~--------------~~~~--- 102 (329)
T 3ckj_A 45 KAGRTISVVLPA---LDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVA--------------AGAR--- 102 (329)
T ss_dssp TTTCCEEEEEEE---SSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHH--------------TTCE---
T ss_pred ccCCcEEEEEee---CCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHH--------------hhhh---
Confidence 345899999999 9998 88999999999999983 489999999999987543221 1100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 004695 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
+ .+.+
T Consensus 103 ---------------------------------------------------------~------------------~~~~ 107 (329)
T 3ckj_A 103 ---------------------------------------------------------V------------------VSRE 107 (329)
T ss_dssp ---------------------------------------------------------E------------------EEHH
T ss_pred ---------------------------------------------------------h------------------ccce
Confidence 0 0001
Q ss_pred EEEe-ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhh-cCCCCCCcEEEEccC
Q 004695 252 VYVS-REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFH-LDPKISSSLAFVQFP 324 (736)
Q Consensus 252 ~yv~-Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~-~~~p~~L~~~v~~f-~Dp~~~~~vg~VQ~P 324 (736)
.++. .++ +.||++|+|.|++. ++||||+++|+|.+ +. |++|.+++..+ .+| ++++|++.
T Consensus 108 ~~~~~~~~-----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~~-p~~l~~l~~~l~~~~----~~~~v~g~ 169 (329)
T 3ckj_A 108 QALPEVPI-----RPGKGEALWRSLAA----SRGDIVVFVDSDLINPH-PMFVPWLVGPLLTGD----GVHLVKSF 169 (329)
T ss_dssp HHCTTSCC-----CCSHHHHHHHHHHH----CCCSEEEECCTTEESCC-TTHHHHHHHHHHSCS----SCCEEEEE
T ss_pred eeeccCCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCcC-hHHHHHHHHHHHhCC----CccEEEEE
Confidence 1111 122 57899999999999 89999999999998 77 99999999875 455 46677664
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.50 E-value=5.1e-14 Score=165.00 Aligned_cols=124 Identities=18% Similarity=0.115 Sum_probs=90.2
Q ss_pred CCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCce-EEEEEcCCCCccch-hhHHHHHHhhhcchhhhhhcCcccC
Q 004695 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKL-HVYLSDDGGSPITL-HGMREACRFAKWWLPFCRRYGIKTI 170 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl-~v~v~DDg~~~~T~-~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (736)
.-|+|+|+||| ||++ +.+.++|.|+.+++|+.++. +|+|+|||++|.+- ..+.|.
T Consensus 178 ~~pkVSVVIpt---YN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~------------------- 234 (657)
T 4fix_A 178 GTANIAVGIPT---FNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAA------------------- 234 (657)
T ss_dssp SCCCEEEECCB---SSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHH-------------------
T ss_pred CCCeEEEEEEe---cCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHH-------------------
Confidence 35899999999 9998 89999999999999965444 99999999987421 111111
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 004695 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (736)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~ 250 (736)
.++. .|+
T Consensus 235 ------------------------------~~~~-------------------------------------------~~~ 241 (657)
T 4fix_A 235 ------------------------------AARL-------------------------------------------GSR 241 (657)
T ss_dssp ------------------------------HHHH-------------------------------------------GGG
T ss_pred ------------------------------HHhc-------------------------------------------CCC
Confidence 0000 124
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEc
Q 004695 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQ 322 (736)
Q Consensus 251 l~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~~~~~vg~VQ 322 (736)
+.++..+ +.|.|+|.|.|++.+-...++|||+++|+|.++. |++|.+++.++.+.. +++.|+
T Consensus 242 I~vI~~~------N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~-pd~L~~ll~~l~~~~---~~~~vg 303 (657)
T 4fix_A 242 LSIHDQP------NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLE-PDSILRVLAMHRFAK---APMLVG 303 (657)
T ss_dssp EEEEECC------CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEEC-THHHHHHHHHHHHBS---SCCEEE
T ss_pred EEEEECC------CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccC-hhHHHHHHHHHHhCC---CcEEEE
Confidence 7787543 3689999999998831101679999999999998 999999999886321 345554
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.50 E-value=1.8e-15 Score=179.54 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=0.0
Q ss_pred CcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004695 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (736)
Q Consensus 95 P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (736)
|.|+|+||| ||++ +.+.+||.|+++++||. ++|+|+|||++|.|.+.+.+.++
T Consensus 2 p~vSVIIp~---yN~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~--------------------- 54 (729)
T 3l7i_A 2 NKLTIIVTY---YNAE-EYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIK--------------------- 54 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEc---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHH---------------------
Confidence 789999999 9998 89999999999999995 89999999999987643322110
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 004695 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (736)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l~yv 254 (736)
.|+ +++.++
T Consensus 55 -------------------------~~~----------------------------------------------~~i~~i 63 (729)
T 3l7i_A 55 -------------------------DYD----------------------------------------------KNIRFI 63 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------hCC----------------------------------------------CCEEEE
Confidence 000 135666
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004695 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (736)
Q Consensus 255 ~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp 312 (736)
..++ +.|+++|.|.|++. ++||||+++|+|.++. |++|.+++..+.++
T Consensus 64 ~~~~-----n~G~~~arN~gi~~----A~gdyI~flD~Dd~~~-p~~l~~l~~~l~~~ 111 (729)
T 3l7i_A 64 DLDE-----NSGHAHARNIALEE----VETPYFMFLDADDELA-SYAITFYLEKFNNT 111 (729)
T ss_dssp ----------------------------------------------------------
T ss_pred ECCC-----CCCHHHHHHHHHHh----ccCCEEEEECCCCCCC-hhHHHHHHHHhcCC
Confidence 5554 46899999999999 8999999999999997 99999999988743
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.40 E-value=5.2e-13 Score=141.39 Aligned_cols=62 Identities=10% Similarity=-0.138 Sum_probs=45.0
Q ss_pred cccccCCCc---cchHHHHHHHHHcCCeEEEeCCCCC----------eeEeecCCChHHHhhhhhhhcccccccc
Q 004695 438 EVGILYQSV---SEDLFTGFILHCKGWTSTYLTPFRP----------QFLGTSTTNLNDLLIQGTRWGSGLTDVG 499 (736)
Q Consensus 438 ~~G~~~~sl---tED~~t~~rl~~~Gwrsvy~~~~~~----------~~~g~aP~tl~~~~~Qr~RWa~G~~qi~ 499 (736)
.+||++... .||.+++.|++.+||++.+.++... ......|+.++.+.+||.||+.+.+..+
T Consensus 189 vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 189 INGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp TTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred cCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 456776543 5999999999999998874332001 1123578999999999999999999876
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.38 E-value=2.5e-12 Score=141.73 Aligned_cols=120 Identities=18% Similarity=0.102 Sum_probs=88.0
Q ss_pred CCcEEEEEecCCCCCCchHHHHHHHHHHHc--CCCCCCceEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004695 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMA--LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~--~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (736)
.|.|+|+||| |||+ +.+.++|.++.+ .+||.+ .+|+|+||||+|.|.+.+.+ ++.
T Consensus 93 ~p~vSVVIP~---yNe~-~~l~~~l~sl~~~l~~~~~~-~EIIVVDDgStD~T~~i~~~--------------~~~---- 149 (387)
T 3f1y_A 93 GLTVSAVLPS---RNVA-DTVGGIIDEIHALNERAPLI-DQILVVDADSEDGTAGVAAS--------------HGA---- 149 (387)
T ss_dssp TCCEEEEEEE---SSCT-TTHHHHHHHHHHHHHHSCCC-SEEEEEECSCSSSHHHHHHH--------------TTC----
T ss_pred CCeEEEEEEc---CCCH-HHHHHHHHHHHHHHhcCCCC-eEEEEEcCcCCccHHHHHHH--------------hCc----
Confidence 5899999999 9998 889999999987 477643 79999999999988643221 110
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 004695 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (736)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~yee~~~~i~~~~~~~~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~p~l 251 (736)
+++. +.+
T Consensus 150 --------------------------------------------------------~v~~-----------------~~~ 156 (387)
T 3f1y_A 150 --------------------------------------------------------EVYS-----------------ENE 156 (387)
T ss_dssp --------------------------------------------------------EEEE-----------------GGG
T ss_pred --------------------------------------------------------hhcc-----------------cce
Confidence 0000 001
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhhc-CCCCCCcEEEEcc
Q 004695 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKISSSLAFVQF 323 (736)
Q Consensus 252 ~yv~Rekrp~~~~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~-~~~p~~L~~~v~~f~-Dp~~~~~vg~VQ~ 323 (736)
+++.+++ +.||++|+|.|++. ++||+|+++|||.. +. |++|.+++..+. +| ++++|.+
T Consensus 157 ~~i~~~~-----n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~~-p~~L~~l~~~l~~~p----~~d~v~G 216 (387)
T 3f1y_A 157 LMSGYGD-----AHGKGDAMWRALSV----TRGDLVLYIDADTRDFR-PQLAYGVLGPVLEVP----GVRFVKA 216 (387)
T ss_dssp TTGGGCS-----CCSHHHHHHHHTTT----CCSSEEEECCTTCSSCC-THHHHTTHHHHHHST----TCCEEEE
T ss_pred eEecCCc-----cCCHHHHHHHHHHh----cCCCEEEEEcCCCCcCC-HHHHHHHHHHHHHCC----CceEEEE
Confidence 1112222 57899999999999 89999999999999 77 999999998774 44 3555544
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.07 E-value=1.1e-09 Score=112.81 Aligned_cols=46 Identities=9% Similarity=-0.022 Sum_probs=40.0
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC-----CCCCCcEEEE
Q 004695 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-----PKISSSLAFV 321 (736)
Q Consensus 267 KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D-----p~~~~~vg~V 321 (736)
.|+|+|.|++. ++|||++++|+|.+++ |++|.+++.++.+ | ++|.|
T Consensus 62 ~a~a~N~Gi~~----A~g~yl~fln~D~~~~-~~~l~~l~~~~~~~~~~~~----~vg~v 112 (249)
T 2nxv_A 62 GFSWHKQMLPR----CKGRYVIFCHEDVELV-DRGYDDLVAAIEALEEADP----KWLVA 112 (249)
T ss_dssp TTTHHHHHGGG----CCSSEEEEEETTEECS-SCCHHHHHHHHHHHHHHCT----TEEEE
T ss_pred HHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhcccCCC----CeeEE
Confidence 46789999999 8999999999999997 8999999988863 5 57766
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.70 E-value=2.5e-07 Score=101.99 Aligned_cols=42 Identities=19% Similarity=0.044 Sum_probs=36.7
Q ss_pred CCChHHHHHHHH----HhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhhc
Q 004695 264 HHFKAGALNVLL----RVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL 310 (736)
Q Consensus 264 ~~~KAGaLN~aL----~~s~~~s~g~~Il~lDAD~~-~~~p~~L~~~v~~f~ 310 (736)
+.||++|+|.|+ +. ++||+|+++|||.. .+ |+.+.+++....
T Consensus 73 n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~~-P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEE----TQWERIHFYDADITSFG-PDWITKAEEAAD 119 (397)
T ss_dssp SSSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCC-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCC-HHHHHHHHHHHH
Confidence 479999999999 77 89999999999996 45 999999887664
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.01 E-value=3.3e-05 Score=84.49 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=32.0
Q ss_pred CCChHHHHHHHHHhcCCCC---CCCEEEEeCCCCCCCchHHHHHHHH
Q 004695 264 HHFKAGALNVLLRVSGVIS---NSPYILGLDCDMYCNDPTSARQAMC 307 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s---~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (736)
+.||..||-.++.+ + ++|+|+++|||-+ . |..+.+.+.
T Consensus 142 r~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~-i-P~~v~~~~k 182 (394)
T 2zu9_A 142 RSGKGEGMLVGLLL----AKAIGAEYVGFVDADNY-I-PGAVNEYVK 182 (394)
T ss_dssp CCSHHHHHHHHHHH----HHHTTCSEEEECCSCBS-C-HHHHHHHHH
T ss_pred cCChHHHHHHHHHH----HhhCCCCEEEEEeCCCC-C-HHHHHHHHH
Confidence 35999999999998 6 8999999999995 3 888866553
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=97.93 E-value=2e-05 Score=84.47 Aligned_cols=44 Identities=7% Similarity=-0.016 Sum_probs=37.1
Q ss_pred CCCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccch
Q 004695 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITL 145 (736)
Q Consensus 93 ~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~ 145 (736)
....++|+||+ |||+. +++.+++++.|.. .+|+|+|||+.|.|.
T Consensus 51 i~~klSIVVPv---YNEe~----~lLesVl~qi~~d--~eIIlVdDGS~D~s~ 94 (391)
T 2wvl_A 51 VLEQTAIVVPT---RNERL----KLLEGVLSGIPHE--ALILVASNSSPDRFQ 94 (391)
T ss_dssp HHTTEEEEEEE---SSCCH----HHHHHHHHTSCTT--SEEEEEECCCHHHHH
T ss_pred HHhceEEEEec---cCcHH----HHHHHHHhcCCCC--ceEEEEECCCCCChH
Confidence 35789999999 99994 4688899998764 999999999988663
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.74 E-value=4.1e-05 Score=82.67 Aligned_cols=46 Identities=15% Similarity=0.202 Sum_probs=40.0
Q ss_pred CCcEEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc
Q 004695 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (736)
Q Consensus 94 ~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T 144 (736)
++.+.|+|+| ||-| + +++++.|+++++.+.++..|+|+|||+.+.|
T Consensus 1 ~~~~pViI~~---yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~ 46 (343)
T 1fo8_A 1 LAVIPILVIA---CDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET 46 (343)
T ss_dssp CCCCCEEEEE---SSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH
T ss_pred CCcccEEEEE---CCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHH
Confidence 3567899999 9999 7 9999999999997777889999999997643
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=89.86 E-value=1.1 Score=46.67 Aligned_cols=53 Identities=15% Similarity=-0.096 Sum_probs=36.0
Q ss_pred cchHHHHHHHHHcCCeEEEeCC-C--C-CeeE---------eecCCChHHHhhhhhhhcccccccc
Q 004695 447 SEDLFTGFILHCKGWTSTYLTP-F--R-PQFL---------GTSTTNLNDLLIQGTRWGSGLTDVG 499 (736)
Q Consensus 447 tED~~t~~rl~~~Gwrsvy~~~-~--~-~~~~---------g~aP~tl~~~~~Qr~RWa~G~~qi~ 499 (736)
.||.+...|+..+|.++.-... . + ..+. ...|......-.+++||..+.+..+
T Consensus 185 gEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 185 LEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp SHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred ccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeee
Confidence 6999999999999998754321 0 0 0111 1234556666788999998888766
No 20
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=37.29 E-value=64 Score=31.95 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004695 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (736)
Q Consensus 267 KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (736)
....+-+||+......+.++|+++|||+=.-+++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 456777788763210125899999999755458999999887754
No 21
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=33.50 E-value=77 Score=30.09 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=32.1
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHhh
Q 004695 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFH 309 (736)
Q Consensus 265 ~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~-~~~~p~~L~~~v~~f 309 (736)
.|-++++..|++.. .+.+.+++++||+ .++ ++.+++++..+
T Consensus 71 ~G~~~si~~al~~~---~~~~~vlv~~~D~P~i~-~~~i~~l~~~~ 112 (197)
T 3d5n_A 71 EGISTSLKLGLRFF---KDYDAVLVALGDMPFVT-KEDVNKIINTF 112 (197)
T ss_dssp GCHHHHHHHHHHHT---TTSSEEEEEETTCCCSC-HHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhh---ccCCcEEEEeCCccccC-HHHHHHHHHHh
Confidence 35688899999872 2348999999999 455 89999988766
No 22
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=25.44 E-value=77 Score=32.45 Aligned_cols=30 Identities=23% Similarity=0.262 Sum_probs=24.9
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004695 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (736)
Q Consensus 282 s~g~~Il~lDAD~~~~~p~~L~~~v~~f~Dp~ 313 (736)
.+.++++..|.|++++ .+-|.+.+..+ ||.
T Consensus 92 ~~~~Wf~~~DDDtyv~-~~nL~~~L~~~-d~~ 121 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVN-PKALLQLLKTF-PQD 121 (280)
T ss_dssp HTCSEEEEEETTEEEC-HHHHHHHHTTS-CTT
T ss_pred CCCcEEEEeCCCcEEc-HHHHHHHHHhC-CCC
Confidence 4789999999999998 88888888655 554
No 23
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=22.09 E-value=1.1e+02 Score=29.19 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=32.0
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004695 266 FKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (736)
Q Consensus 266 ~KAGaLN~aL~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (736)
+.++++..|++.. .+.+.+++++||+-.-+++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 3688899999872 1678999999999433378899988877
No 24
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=21.57 E-value=1e+02 Score=29.70 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=32.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHhhcC
Q 004695 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (736)
Q Consensus 264 ~~~KAGaLN~aL~~s~~~s~g~~Il~lDAD~-~~~~p~~L~~~v~~f~D 311 (736)
..+.++.++ +++. .+.+.+++++||+ ..+ ++.+++++..+.+
T Consensus 71 ~~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~~-~~~i~~l~~~~~~ 113 (234)
T 2y6p_A 71 PSGSDRVLY-VVRD----LDVDLIINYQGDEPFVY-EEDIKLIFRELEK 113 (234)
T ss_dssp CSHHHHHHH-HHTT----CCCSEEEECCTTCCCCC-HHHHHHHHHHHHH
T ss_pred ccchHHHHH-HHHh----CCCCEEEEecCCcCcCC-HHHHHHHHHHHHh
Confidence 356777774 5665 4678999999999 766 8899998887753
Done!