Query 004697
Match_columns 736
No_of_seqs 230 out of 1205
Neff 5.6
Searched_HMMs 46136
Date Thu Mar 28 11:23:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004697.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004697hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 6E-233 1E-237 1868.9 43.4 719 9-734 5-729 (843)
2 TIGR02093 P_ylase glycogen/sta 100.0 6E-223 1E-227 1899.8 59.6 690 36-735 1-694 (794)
3 cd04300 GT1_Glycogen_Phosphory 100.0 2E-221 4E-226 1894.2 62.1 692 33-734 1-696 (797)
4 PRK14985 maltodextrin phosphor 100.0 3E-221 7E-226 1882.6 59.8 692 27-735 5-696 (798)
5 PRK14986 glycogen phosphorylas 100.0 2E-219 5E-224 1874.2 63.7 698 26-735 11-710 (815)
6 PF00343 Phosphorylase: Carboh 100.0 3E-200 6E-205 1696.5 44.6 609 116-734 1-610 (713)
7 COG0058 GlgP Glucan phosphoryl 100.0 1E-180 3E-185 1535.9 41.8 640 28-733 5-644 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 5E-133 1E-137 1166.8 43.1 512 84-721 85-619 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 2E-131 4E-136 1134.8 38.7 507 87-719 1-528 (601)
10 COG0297 GlgA Glycogen synthase 100.0 1.3E-39 2.8E-44 365.7 19.1 334 259-721 83-428 (487)
11 PLN02939 transferase, transfer 100.0 5.4E-38 1.2E-42 369.6 25.8 448 51-719 449-915 (977)
12 PRK14098 glycogen synthase; Pr 100.0 2.7E-37 5.9E-42 350.0 20.9 404 133-719 16-435 (489)
13 PRK14099 glycogen synthase; Pr 100.0 9.5E-35 2.1E-39 329.1 20.0 340 246-720 70-429 (485)
14 TIGR02095 glgA glycogen/starch 100.0 3E-34 6.5E-39 322.4 21.0 401 134-723 12-426 (473)
15 cd03791 GT1_Glycogen_synthase_ 100.0 1.3E-33 2.7E-38 316.0 21.5 411 131-720 8-427 (476)
16 PRK00654 glgA glycogen synthas 100.0 8.3E-33 1.8E-37 311.0 21.2 390 134-719 12-412 (466)
17 PLN02316 synthase/transferase 100.0 1.3E-29 2.8E-34 303.3 24.0 367 138-720 603-983 (1036)
18 PF08323 Glyco_transf_5: Starc 99.8 1.4E-20 3E-25 196.0 4.3 221 136-476 13-242 (245)
19 cd03793 GT1_Glycogen_synthase_ 99.4 1.3E-11 2.8E-16 141.4 18.4 228 440-719 216-530 (590)
20 TIGR02470 sucr_synth sucrose s 99.1 7.9E-10 1.7E-14 131.5 16.4 144 555-719 541-693 (784)
21 PLN00142 sucrose synthase 99.1 1.6E-09 3.5E-14 129.0 15.9 144 555-719 564-716 (815)
22 TIGR02149 glgA_Coryne glycogen 99.0 3.1E-09 6.8E-14 115.1 14.2 192 445-720 139-331 (388)
23 TIGR02472 sucr_P_syn_N sucrose 98.9 2E-08 4.4E-13 112.7 14.4 139 561-719 245-390 (439)
24 TIGR02468 sucrsPsyn_pln sucros 98.8 2.1E-08 4.6E-13 122.0 12.8 138 561-719 476-621 (1050)
25 TIGR03449 mycothiol_MshA UDP-N 98.8 9.3E-08 2E-12 104.9 16.2 196 448-724 161-358 (405)
26 cd03813 GT1_like_3 This family 98.7 2.4E-07 5.2E-12 105.3 16.7 187 442-719 236-426 (475)
27 cd03805 GT1_ALG2_like This fam 98.6 5.1E-07 1.1E-11 98.0 15.9 147 561-724 208-354 (392)
28 cd03796 GT1_PIG-A_like This fa 98.6 4.3E-07 9.3E-12 100.2 14.1 133 561-723 190-322 (398)
29 cd03819 GT1_WavL_like This fam 98.6 9.8E-07 2.1E-11 93.7 15.3 137 554-719 177-314 (355)
30 cd03788 GT1_TPS Trehalose-6-Ph 98.5 7.1E-07 1.5E-11 101.5 13.5 143 562-719 262-411 (460)
31 cd04962 GT1_like_5 This family 98.5 2.8E-06 6.1E-11 91.1 14.9 128 560-719 193-320 (371)
32 cd03812 GT1_CapH_like This fam 98.4 4.2E-06 9.1E-11 89.0 14.3 133 560-724 188-321 (358)
33 cd03800 GT1_Sucrose_synthase T 98.4 4E-06 8.6E-11 90.5 13.9 140 561-724 217-358 (398)
34 PF05693 Glycogen_syn: Glycoge 98.3 8.8E-06 1.9E-10 94.0 16.1 289 302-700 120-503 (633)
35 cd03809 GT1_mtfB_like This fam 98.3 5.9E-06 1.3E-10 87.0 13.2 134 561-724 192-326 (365)
36 PRK15427 colanic acid biosynth 98.3 7E-06 1.5E-10 91.8 13.3 129 564-719 222-354 (406)
37 cd03822 GT1_ecORF704_like This 98.3 1.1E-05 2.4E-10 84.9 13.7 137 562-724 183-324 (366)
38 PLN02871 UDP-sulfoquinovose:DA 98.3 1.5E-05 3.3E-10 90.3 15.5 129 561-724 260-390 (465)
39 PRK10307 putative glycosyl tra 98.3 3E-05 6.4E-10 85.9 17.5 188 445-719 166-357 (412)
40 PRK15490 Vi polysaccharide bio 98.2 2.7E-05 5.8E-10 90.2 17.0 129 561-720 395-523 (578)
41 cd03792 GT1_Trehalose_phosphor 98.2 1.2E-05 2.6E-10 87.7 12.7 139 555-719 183-323 (372)
42 cd03807 GT1_WbnK_like This fam 98.2 3.4E-05 7.4E-10 80.3 15.2 133 560-724 189-322 (365)
43 cd05844 GT1_like_7 Glycosyltra 98.2 1.6E-05 3.6E-10 85.1 13.0 134 564-724 188-326 (367)
44 cd03821 GT1_Bme6_like This fam 98.2 1.1E-05 2.5E-10 84.2 11.1 136 561-724 200-335 (375)
45 PF00534 Glycos_transf_1: Glyc 98.1 1.4E-05 2.9E-10 77.2 9.8 133 560-720 11-143 (172)
46 cd04951 GT1_WbdM_like This fam 98.1 4.9E-05 1.1E-09 80.6 14.8 125 561-718 185-309 (360)
47 cd01635 Glycosyltransferase_GT 98.1 7.1E-06 1.5E-10 80.3 7.5 120 569-717 109-229 (229)
48 cd03818 GT1_ExpC_like This fam 98.1 1.2E-05 2.7E-10 88.6 10.2 143 560-724 207-356 (396)
49 TIGR02400 trehalose_OtsA alpha 98.0 7.5E-05 1.6E-09 85.2 14.3 142 563-719 258-406 (456)
50 PRK15484 lipopolysaccharide 1, 98.0 5.4E-05 1.2E-09 83.7 12.2 134 561-717 190-325 (380)
51 cd03825 GT1_wcfI_like This fam 98.0 0.00013 2.8E-09 77.5 14.4 125 561-720 188-315 (365)
52 cd03798 GT1_wlbH_like This fam 97.9 0.00025 5.5E-09 73.6 15.3 130 561-719 199-328 (377)
53 cd03795 GT1_like_4 This family 97.9 5.6E-05 1.2E-09 80.1 9.7 129 562-720 189-317 (357)
54 cd03808 GT1_cap1E_like This fa 97.9 5.3E-05 1.2E-09 78.5 9.2 130 561-720 185-314 (359)
55 cd03816 GT1_ALG1_like This fam 97.9 0.00053 1.1E-08 76.9 17.6 140 562-724 230-371 (415)
56 cd03817 GT1_UGDG_like This fam 97.8 0.0001 2.2E-09 77.2 10.4 132 561-721 199-330 (374)
57 TIGR03088 stp2 sugar transfera 97.8 0.00012 2.7E-09 79.4 10.4 136 562-724 192-328 (374)
58 PHA01633 putative glycosyl tra 97.7 0.00017 3.7E-09 79.3 9.8 113 562-705 146-261 (335)
59 PRK10125 putative glycosyl tra 97.7 0.00035 7.5E-09 78.4 12.3 115 562-720 239-356 (405)
60 cd03811 GT1_WabH_like This fam 97.7 0.00012 2.5E-09 75.6 7.8 134 560-724 185-318 (353)
61 cd03799 GT1_amsK_like This is 97.6 0.00023 4.9E-09 75.4 9.0 136 562-724 177-317 (355)
62 cd03801 GT1_YqgM_like This fam 97.6 0.00059 1.3E-08 70.4 11.3 135 561-724 196-331 (374)
63 cd03806 GT1_ALG11_like This fa 97.5 0.00049 1.1E-08 77.4 11.3 146 562-724 235-382 (419)
64 PRK15179 Vi polysaccharide bio 97.5 0.00063 1.4E-08 81.4 11.5 128 561-719 514-641 (694)
65 PLN02949 transferase, transfer 97.4 0.00054 1.2E-08 78.4 10.1 143 563-724 267-412 (463)
66 cd03823 GT1_ExpE7_like This fa 97.4 0.0008 1.7E-08 70.4 10.2 126 562-720 189-314 (359)
67 cd03804 GT1_wbaZ_like This fam 97.4 0.00032 7E-09 75.4 7.2 120 565-724 196-316 (351)
68 cd03802 GT1_AviGT4_like This f 97.4 0.0005 1.1E-08 72.5 7.9 128 564-724 171-298 (335)
69 PRK14501 putative bifunctional 97.4 0.0047 1E-07 74.5 17.1 134 563-705 264-404 (726)
70 PLN03063 alpha,alpha-trehalose 97.3 0.0033 7.1E-08 76.6 15.4 272 333-718 148-426 (797)
71 cd03794 GT1_wbuB_like This fam 97.3 0.0011 2.5E-08 69.3 10.1 133 561-724 217-355 (394)
72 TIGR02918 accessory Sec system 97.1 0.0019 4.2E-08 74.6 9.8 122 565-718 320-442 (500)
73 cd04949 GT1_gtfA_like This fam 97.1 0.0012 2.7E-08 71.4 7.6 125 564-719 204-329 (372)
74 cd04946 GT1_AmsK_like This fam 97.0 0.0042 9E-08 69.5 11.0 135 563-724 229-367 (407)
75 cd03820 GT1_amsD_like This fam 97.0 0.0024 5.2E-08 65.8 8.2 128 562-720 176-304 (348)
76 cd04955 GT1_like_6 This family 96.9 0.0028 6.1E-08 67.4 8.8 123 565-720 194-317 (363)
77 cd03814 GT1_like_2 This family 96.9 0.0029 6.4E-08 66.4 8.4 124 562-721 195-318 (364)
78 TIGR02398 gluc_glyc_Psyn gluco 96.8 0.018 3.8E-07 66.6 14.0 140 552-705 278-424 (487)
79 PRK09922 UDP-D-galactose:(gluc 96.6 0.0075 1.6E-07 65.8 9.4 129 564-724 180-314 (359)
80 PF11897 DUF3417: Protein of u 96.4 0.0016 3.6E-08 61.4 2.3 43 55-100 74-118 (118)
81 PLN02275 transferase, transfer 96.4 0.02 4.3E-07 63.2 10.8 141 565-724 214-363 (371)
82 PLN02501 digalactosyldiacylgly 96.4 0.0096 2.1E-07 70.9 8.4 129 555-719 539-667 (794)
83 PLN02846 digalactosyldiacylgly 96.3 0.015 3.3E-07 66.7 9.1 121 565-719 229-349 (462)
84 PHA01630 putative group 1 glyc 96.2 0.015 3.2E-07 63.9 8.5 116 564-717 142-257 (331)
85 PF13692 Glyco_trans_1_4: Glyc 95.6 0.034 7.3E-07 51.4 6.7 126 563-726 1-127 (135)
86 TIGR03087 stp1 sugar transfera 95.4 0.059 1.3E-06 59.7 9.2 131 562-725 222-353 (397)
87 KOG1111 N-acetylglucosaminyltr 95.3 0.036 7.7E-07 61.2 6.7 128 562-720 193-320 (426)
88 COG0438 RfaG Glycosyltransfera 93.8 0.48 1E-05 47.8 10.4 128 564-720 199-327 (381)
89 KOG3742 Glycogen synthase [Car 93.7 0.42 9.1E-06 54.2 10.3 110 440-595 242-355 (692)
90 PLN03064 alpha,alpha-trehalose 91.4 3.7 8E-05 51.3 15.4 130 564-705 363-502 (934)
91 cd04950 GT1_like_1 Glycosyltra 80.8 3.8 8.2E-05 45.2 6.9 125 563-725 204-331 (373)
92 PRK05749 3-deoxy-D-manno-octul 80.4 5.6 0.00012 44.5 8.1 137 562-718 231-371 (425)
93 PRK10117 trehalose-6-phosphate 79.2 81 0.0018 36.9 17.0 134 564-707 255-397 (474)
94 TIGR00236 wecB UDP-N-acetylglu 77.4 11 0.00025 41.1 9.3 69 647-725 256-325 (365)
95 KOG0853 Glycosyltransferase [C 72.9 22 0.00048 41.5 10.3 147 561-722 270-418 (495)
96 PF00982 Glyco_transf_20: Glyc 71.6 1.3E+02 0.0028 35.1 16.3 131 564-706 276-416 (474)
97 cd03786 GT1_UDP-GlcNAc_2-Epime 59.0 47 0.001 35.8 9.1 133 555-724 192-327 (363)
98 TIGR01133 murG undecaprenyldip 57.5 52 0.0011 35.2 9.1 51 660-719 245-303 (348)
99 PRK00025 lpxB lipid-A-disaccha 56.6 36 0.00078 37.2 7.8 107 555-698 179-287 (380)
100 PF13579 Glyco_trans_4_4: Glyc 54.8 5.2 0.00011 36.8 0.8 36 331-381 72-107 (160)
101 COG0380 OtsA Trehalose-6-phosp 48.3 22 0.00047 41.6 4.5 134 565-709 283-425 (486)
102 TIGR00215 lpxB lipid-A-disacch 46.7 75 0.0016 35.6 8.4 112 555-703 184-298 (385)
103 PLN02205 alpha,alpha-trehalose 46.2 1.9E+02 0.004 36.5 12.3 134 562-705 337-493 (854)
104 TIGR03713 acc_sec_asp1 accesso 43.8 1.1E+02 0.0023 36.2 9.3 137 562-720 319-475 (519)
105 PLN02605 monogalactosyldiacylg 39.9 1.4E+02 0.003 33.2 9.1 111 554-698 198-309 (382)
106 cd03785 GT1_MurG MurG is an N- 39.3 99 0.0021 33.1 7.7 64 647-720 236-307 (350)
107 PF13439 Glyco_transf_4: Glyco 37.4 35 0.00077 31.8 3.5 40 448-493 137-176 (177)
108 cd01635 Glycosyltransferase_GT 37.2 59 0.0013 31.4 5.1 46 331-390 50-95 (229)
109 TIGR02919 accessory Sec system 35.5 77 0.0017 36.6 6.3 49 647-697 329-377 (438)
110 PRK00726 murG undecaprenyldiph 33.4 1.4E+02 0.003 32.3 7.8 117 561-719 180-306 (357)
111 PRK13609 diacylglycerol glucos 30.6 1.7E+02 0.0037 32.1 7.9 44 647-698 257-300 (380)
112 KOG2387 CTP synthase (UTP-ammo 30.4 4.9E+02 0.011 30.5 11.2 136 544-709 258-413 (585)
113 PF14407 Frankia_peptide: Ribo 30.1 20 0.00043 30.3 0.4 41 92-132 2-42 (61)
114 PF13477 Glyco_trans_4_2: Glyc 28.9 67 0.0015 29.6 3.8 36 331-380 73-109 (139)
115 cd00127 DSPc Dual specificity 28.8 45 0.00097 31.0 2.6 37 331-371 81-120 (139)
116 PF00814 Peptidase_M22: Glycop 28.7 25 0.00055 37.6 1.0 54 108-163 32-88 (268)
117 PF00782 DSPc: Dual specificit 24.6 90 0.0019 28.9 3.8 36 332-371 74-112 (133)
118 smart00195 DSPc Dual specifici 23.0 82 0.0018 29.4 3.2 38 331-372 78-118 (138)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-233 Score=1868.94 Aligned_cols=719 Identities=54% Similarity=0.896 Sum_probs=699.9
Q ss_pred cchHhhhcccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEE
Q 004697 9 KNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTY 88 (736)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vy 88 (736)
-.++++|+||+|.......++.+++++|.+|+++++.+|+..|++++.|.|+|.+|||+|+.+|++|+++|.+.++||||
T Consensus 5 ~~~~~~r~qis~r~~~~~~~~~e~~~~f~~H~~ftl~k~~~~~~~~~~yfA~a~tvRD~Lv~~W~rTqqhy~~~dpKrvY 84 (843)
T KOG2099|consen 5 LIDSEKRKQISVRGIAGVEDVAEVKKSFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRVY 84 (843)
T ss_pred ccccchhhhcchhcccCCccHHHHHHHHHhheeeeeecCcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceee
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEchhccccchhHHhhcCCcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccc
Q 004697 89 YLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRY 168 (736)
Q Consensus 89 Y~SmEfl~Gr~L~nnl~nLg~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~ 168 (736)
||||||+|||+|.|.++||||.+.+.+||.+||+|+|+|+|+|+|||||||||||||+||||||||||+|++||||||+|
T Consensus 85 YLSlEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYey 164 (843)
T KOG2099|consen 85 YLSLEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEY 164 (843)
T ss_pred EeehHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEE
Q 004697 169 GLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (736)
Q Consensus 169 G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lr 248 (736)
|+|+|+|.+|||+|.||+||+.|||||+.||++++||+|||+|+...+| .+|++++.|.|+|||+|||||+|++||+||
T Consensus 165 GiF~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlR 243 (843)
T KOG2099|consen 165 GIFKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLR 243 (843)
T ss_pred hhHHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeee
Confidence 9999999999999999999999999999999999999999999988788 579999999999999999999999999999
Q ss_pred EEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHccc-----
Q 004697 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKS----- 323 (736)
Q Consensus 249 lw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g----- 323 (736)
||+|+ ++++|+|..||.|+|.+|+..++.+|+||.+|||+|+..+||+||||||||+|+|+||||||||+.+.+
T Consensus 244 LWsak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~ 322 (843)
T KOG2099|consen 244 LWSAK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREP 322 (843)
T ss_pred eeccC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCcccc
Confidence 99999 777999999999999999999999999999999999999999999999999999999999999996542
Q ss_pred -CcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHH
Q 004697 324 -GRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 402 (736)
Q Consensus 324 -~~~l~~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ 402 (736)
...|.+||++++||||||||+||||||||+|+|.+||+|++||+||.+||+|||||++|||+|+||++||+++||||+|
T Consensus 323 ~~~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHle 402 (843)
T KOG2099|consen 323 VRTNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLE 402 (843)
T ss_pred cccchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHH
Confidence 1238899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCc
Q 004697 403 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQ 482 (736)
Q Consensus 403 ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~ 482 (736)
|||+||.+|++.+.++||.|.+++++|||+|++++..++|||+|||++||.||||+++|++++|+++|+||+++||+||.
T Consensus 403 IIy~In~~~l~~i~~~fp~D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFq 482 (843)
T KOG2099|consen 403 IIYEINQRFLQTVAAKFPGDVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQ 482 (843)
T ss_pred HHHHHHHHHHHHHHHHCCCcHHHHhhhhhhhcCCccceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChHHhc
Confidence 99999999999999999999999999999998322229999999999999999999999999999999999999999999
Q ss_pred ccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCC
Q 004697 483 NKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDP 562 (736)
Q Consensus 483 ~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp 562 (736)
|+||||||||||..|||.|+++|++.+| ++|.+|+++|.+|.++++|++|++.|+++|++||.+|++||++++|+.+||
T Consensus 483 NkTNGITPRRWL~~cnP~LadlI~e~ig-e~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp 561 (843)
T KOG2099|consen 483 NKTNGITPRRWLLLCNPGLADLITEKIG-EEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINP 561 (843)
T ss_pred cccCCcCHHHHHHhcCchHHHHHHHHhh-hHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCc
Confidence 9999999999999999999999999999 699999999999999999999999999999999999999999999999999
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~ 642 (736)
+++||+||||+||||||+||+|+++.||.+||+ +|.. .++|++++|||||+|+|++||.|||+|+++|+++||||.|
T Consensus 562 ~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~k--~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~v 638 (843)
T KOG2099|consen 562 SSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPAK--AFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEV 638 (843)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhh--ccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhh
Confidence 999999999999999999999999999999998 7753 6889999999999999999999999999999999999999
Q ss_pred CCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccc
Q 004697 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAE 722 (736)
Q Consensus 643 ~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ 722 (736)
.++|||+|+|||+||+||+|+||||+|+||||||+||||||||||||||+|+|||+|||||||+|++|++|.|+||+++|
T Consensus 639 gd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e 718 (843)
T KOG2099|consen 639 GDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVE 718 (843)
T ss_pred hheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhccC
Q 004697 723 QVPKLRKEREDG 734 (736)
Q Consensus 723 ev~~~~~~~~y~ 734 (736)
+|++||++| |+
T Consensus 719 ~V~~L~k~g-y~ 729 (843)
T KOG2099|consen 719 DVEALRKKG-YN 729 (843)
T ss_pred HHHHHHhhc-cc
Confidence 999999886 54
No 2
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=5.9e-223 Score=1899.81 Aligned_cols=690 Identities=56% Similarity=0.923 Sum_probs=672.2
Q ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhhcCCcHHHHHH
Q 004697 36 ISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYAD 115 (736)
Q Consensus 36 i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~nLg~~~~~~e 115 (736)
|.+||++++|+++++||++++|.|||.+|||+++++|.+|++.+.+.++|+||||||||||||+|.|||+|||+++++++
T Consensus 1 ~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~nlgl~~~~~~ 80 (794)
T TIGR02093 1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80 (794)
T ss_pred CHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEehhhhcchHHHHHHHhCCCHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcc
Q 004697 116 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 195 (736)
Q Consensus 116 aL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe 195 (736)
||++||+|++||+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+|+..++|||
T Consensus 81 ~l~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe 160 (794)
T TIGR02093 81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160 (794)
T ss_pred HHHHhCCCHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEEECCEEEEcCCCcCCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEECCeEEEcCC-Cce--eeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhHH
Q 004697 196 VVRHDVVFPVRFFGSVMVNPN-GTR--KWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESA 272 (736)
Q Consensus 196 ~~~~~~~~~v~f~G~~~~~~~-g~~--~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a 272 (736)
++|++.+++|+|+|+++...+ |+. +|++++.|+|||||+|||||+++++|+||||+++ +...|++..|+.|+|.+|
T Consensus 161 ~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LRLW~a~-~~~~f~l~~fn~gdy~~a 239 (794)
T TIGR02093 161 IRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGDYYEA 239 (794)
T ss_pred eecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEEEeecceeecCCCCCceEEEEEEEec-CccccCHhhccCccHhhh
Confidence 999999999999999976544 643 3999999999999999999999999999999999 566899999999999999
Q ss_pred HhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHH
Q 004697 273 AQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMR 352 (736)
Q Consensus 273 ~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~HpalaipElmR 352 (736)
+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+ .+++.|++|++||||||||||+||||||
T Consensus 240 ~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~--~~l~~l~~~~~ihlNDtHpalai~ElmR 317 (794)
T TIGR02093 240 VEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETH--PDLSDFPKKVAIQLNDTHPALAIPELMR 317 (794)
T ss_pred hhChhhcCccccCCcCCCCccchHHHHHHHHHHhhhhHHHHHHHHHHHhC--CChhhCCcceEEEecCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 4799999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccccccccc
Q 004697 353 LLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCIL 432 (736)
Q Consensus 353 ~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii 432 (736)
+|+|++|++||+||++|+++|+||||||+|||+|+||++||+++||||++||++||++|++.++..+|.|++++.+|+||
T Consensus 318 ~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~d~~~~~~~sii 397 (794)
T TIGR02093 318 LLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSII 397 (794)
T ss_pred HHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCCcHHHHhheeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-cccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCc
Q 004697 433 DNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 511 (736)
Q Consensus 433 ~~~~~~~-~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~ 511 (736)
++ +++ +||||+||+++||+|||||+||++++|+.+|++|+.+||+||.|||||||+|||+.+|||+|++||++++|
T Consensus 398 ~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig- 474 (794)
T TIGR02093 398 EE--GQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIG- 474 (794)
T ss_pred ec--CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcC-
Confidence 97 334 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHH
Q 004697 512 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYK 591 (736)
Q Consensus 512 ~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~ 591 (736)
++|.+|++.|++|+++++|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+|++++||.
T Consensus 475 ~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~ 554 (794)
T TIGR02093 475 DDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYN 554 (794)
T ss_pred chhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhccccccccc
Q 004697 592 KLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQH 671 (736)
Q Consensus 592 ~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~ 671 (736)
+|++ +|+. +++|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||||++|++|+||||||||
T Consensus 555 ~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseq 631 (794)
T TIGR02093 555 RIKE-DPPK--DIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQ 631 (794)
T ss_pred HHHh-CCCc--CCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhh
Confidence 9998 7764 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhhhccCC
Q 004697 672 ISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL 735 (736)
Q Consensus 672 ~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~~~y~~ 735 (736)
|||||+||||||||||||||+|||||||||||||.++||++|+|+||++++||.++|++| |++
T Consensus 632 istag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-Y~~ 694 (794)
T TIGR02093 632 ISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKG-YNP 694 (794)
T ss_pred CCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHHHHHHHcC-CCc
Confidence 999999999999999999999999999999999999999999999999999999999888 874
No 3
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=1.9e-221 Score=1894.15 Aligned_cols=692 Identities=56% Similarity=0.907 Sum_probs=673.4
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhhcCCcHHH
Q 004697 33 ASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNA 112 (736)
Q Consensus 33 ~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~nLg~~~~ 112 (736)
+++|.+||.+++|+++++||++++|.|||.+|||+++++|.+|++.+...+.|+||||||||||||+|.|||+|||++++
T Consensus 1 ~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~L~nnl~nLgl~~~ 80 (797)
T cd04300 1 KKAIVDHLEYTLGKDPEEATDRDLYQALAYAVRDRLVERWNRTQQYYYDKDAKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80 (797)
T ss_pred ChHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEchhhhcchHHHHHHHhCCcHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCC
Q 004697 113 YADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFS 192 (736)
Q Consensus 113 ~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~ 192 (736)
+++||++||++++||+++|+||||||||||||||||||||||||+|++||||||+||||+|+|++|||+|.||+|+..++
T Consensus 81 ~~~~L~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F~Q~i~~G~Q~E~pd~Wl~~~~ 160 (797)
T cd04300 81 VREALAELGVDLEDLEEQEPDAGLGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGN 160 (797)
T ss_pred HHHHHHHhCCCHHHHHhcCCCCCCCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEecCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCeeEEEEECCeEEEcCC-Ccee--eeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchh
Q 004697 193 PWEVVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQY 269 (736)
Q Consensus 193 pwe~~~~~~~~~v~f~G~~~~~~~-g~~~--~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y 269 (736)
|||+++++.+++|+|+|+++...+ |+.+ |++++.|+|||||+|||||+++++|+||||+++ +...||++.|+.++|
T Consensus 161 pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~dl~~fn~gdy 239 (797)
T cd04300 161 PWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAE-ASEEFDLDAFNRGDY 239 (797)
T ss_pred CceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEEeeecceeecCCCCCceEEEEEEEee-CCCCcCHHHhcCCch
Confidence 999999999999999999986543 6543 999999999999999999999999999999999 566799999999999
Q ss_pred hHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHH
Q 004697 270 ESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPE 349 (736)
Q Consensus 270 ~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~HpalaipE 349 (736)
.+++++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.++ +++.|+++++||||||||||+|||
T Consensus 240 ~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~--~~~~l~~~~~ihlNDtHpalai~E 317 (797)
T cd04300 240 IRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKTHG--PLSEFPDKVAIQLNDTHPALAIPE 317 (797)
T ss_pred hhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhhhHHHHHHHHHHHhCC--ChhhCCCceEEEecCCcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999984 689999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCccccccc
Q 004697 350 LMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSM 429 (736)
Q Consensus 350 lmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~ 429 (736)
|||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|++.+++.+|.+++++.+|
T Consensus 318 lmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In~~~~~~~~~~~~~~~~~~~~l 397 (797)
T cd04300 318 LMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKYPGDEDRIRRM 397 (797)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCC-CcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHh
Q 004697 430 CILDNNPKK-PVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKW 508 (736)
Q Consensus 430 ~ii~~~~~~-~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~ 508 (736)
+||++ +. ++||||+||+++||+|||||+||++++|+++|++|+.+||+||+|||||||+|||+.+|||+|++||+++
T Consensus 398 ~ii~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ 475 (797)
T cd04300 398 SIIEE--GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITET 475 (797)
T ss_pred ccccc--CCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHh
Confidence 99987 33 3799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHH
Q 004697 509 LKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIY 588 (736)
Q Consensus 509 ~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~ 588 (736)
+|+ +|.+|+++|++|.++++|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+|++++
T Consensus 476 ig~-~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~ 554 (797)
T cd04300 476 IGD-DWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIH 554 (797)
T ss_pred cCc-hhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHH
Confidence 994 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccc
Q 004697 589 RYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSEL 668 (736)
Q Consensus 589 r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv 668 (736)
||.+|++ +|.. +++|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||||++|++|+|||||
T Consensus 555 ~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDv 631 (797)
T cd04300 555 LYNRIKE-NPNA--DIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADL 631 (797)
T ss_pred HHHHHHh-CCCc--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhh
Confidence 9999998 7753 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhhhccC
Q 004697 669 SQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG 734 (736)
Q Consensus 669 ~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~~~y~ 734 (736)
||||||||+||||||||||||||+|||||+|||||||.++||++|+|+||++++||.++|++| |+
T Consensus 632 seqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-y~ 696 (797)
T cd04300 632 SEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANG-YY 696 (797)
T ss_pred hhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CC
Confidence 999999999999999999999999999999999999999999999999999999999999988 54
No 4
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=3.4e-221 Score=1882.63 Aligned_cols=692 Identities=44% Similarity=0.758 Sum_probs=674.0
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhhc
Q 004697 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (736)
Q Consensus 27 ~~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~n 106 (736)
.++++|+++|.+||.+++|+++++||++++|.|||.+|||+|+++ ++.+.+.+.|+||||||||||||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~----~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~n 80 (798)
T PRK14985 5 FNKKQFQAALTRQWQRFGLNSAAEMTPRQWWQAVSAALAELLRAQ----PAAKPVANQRHVNYISMEFLIGRLTGNNLLN 80 (798)
T ss_pred CCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHH----HHHHhhcCCcEEEEechhhhccHHHHHHHHh
Confidence 367899999999999999999999999999999999999999998 5667777899999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeeccc
Q 004697 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (736)
Q Consensus 107 Lg~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~ 186 (736)
||++++++|||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+||||+|.||.
T Consensus 81 lgl~~~~~~al~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~ 160 (798)
T PRK14985 81 LGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (798)
T ss_pred cCCHHHHHHHHHHcCCCHHHHhccCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCc
Q 004697 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (736)
Q Consensus 187 Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~ 266 (736)
|+..++|||.++++..++|+|+|+++.. +|+.+|++++.|.|||||+|||||+++++|+||||++++ ..+|++..||.
T Consensus 161 Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~-~~~~~l~~fn~ 238 (798)
T PRK14985 161 WHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQATH-AHPFDLTKFND 238 (798)
T ss_pred cccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEeccccccCCCCCceEEEEEeEcCC-CCccCHHHcCC
Confidence 9999999999999999999999999754 788789999999999999999999999999999999995 45899999999
Q ss_pred chhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCccccc
Q 004697 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (736)
Q Consensus 267 ~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpala 346 (736)
|+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.| ++|+.|++|++||||||||||+
T Consensus 239 gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~vqdilr~~~~~~--~~l~~l~~~~~ihlNDtHpala 316 (798)
T PRK14985 239 GDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELPDYEVIQLNDTHPTIA 316 (798)
T ss_pred cchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChhhCCCCcEEEecCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999876 6899999999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccc
Q 004697 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (736)
Q Consensus 347 ipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~ 426 (736)
||||||+|+|++|++||+||++|+++|+||||||+|||+|+||++||+++||||++||++||++|+..+...+|.+.+++
T Consensus 317 i~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~d~~~~ 396 (798)
T PRK14985 317 IPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTRFKTLVEKTWPGDKKVW 396 (798)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCcHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHH
Q 004697 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (736)
Q Consensus 427 ~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~ 506 (736)
.+|+||++ ++||||+||+++||+|||||+||++++++.+|++|+++||++|.|||||||+|||+.+|||+|++||+
T Consensus 397 ~~~sii~~----~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~ 472 (798)
T PRK14985 397 AKLAVVHD----KQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLD 472 (798)
T ss_pred hhhhhccC----CeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHH
Confidence 99999987 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHH
Q 004697 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (736)
Q Consensus 507 ~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~ 586 (736)
+++|+ +|.+|++.|++|+++.+|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+|++
T Consensus 473 ~~ig~-~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~i 551 (798)
T PRK14985 473 KTLKK-EWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHI 551 (798)
T ss_pred HhcCc-chhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhh
Confidence 99994 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccc
Q 004697 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (736)
Q Consensus 587 i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~ga 666 (736)
++||.+|++ +|.. +++|+||||||||||+|.+||+|||+|+++|+++|+||+|+++|||||+|||||++|++|+|||
T Consensus 552 i~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaa 628 (798)
T PRK14985 552 LALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAA 628 (798)
T ss_pred HHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhh
Confidence 999999998 7754 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhhhccCC
Q 004697 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL 735 (736)
Q Consensus 667 Dv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~~~y~~ 735 (736)
||||||||||+||||||||||||||+|||||||||||||.++||++|+|+||++++||.++|++| |++
T Consensus 629 Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~~~~~~~-y~~ 696 (798)
T PRK14985 629 DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKALLAKG-YDP 696 (798)
T ss_pred hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CCh
Confidence 99999999999999999999999999999999999999999999999999999999999999888 874
No 5
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=2.1e-219 Score=1874.19 Aligned_cols=698 Identities=46% Similarity=0.795 Sum_probs=680.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhh
Q 004697 26 ANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIG 105 (736)
Q Consensus 26 ~~~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~ 105 (736)
.+++++|+++|.+||++++|+++++||++++|.|||.+|||+++++|.+|++.+.+.+.|+||||||||||||+|.|||+
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~ 90 (815)
T PRK14986 11 TLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALL 90 (815)
T ss_pred CCCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcEEEEEchhhhccHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecc
Q 004697 106 SLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAE 185 (736)
Q Consensus 106 nLg~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd 185 (736)
|||+++++++||++||+|++||+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||
T Consensus 91 nlg~~~~~~~al~~lg~~l~~l~~~E~Da~LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F~Q~I~dG~Q~E~pd 170 (815)
T PRK14986 91 SLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPD 170 (815)
T ss_pred hcCcHHHHHHHHHHcCCCHHHHHhcCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcccccCCeeEEEEECCeEEEcCCCce-eeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCccccccc
Q 004697 186 DWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTR-KWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQF 264 (736)
Q Consensus 186 ~Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~-~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~ 264 (736)
+|+..++|||++|++.+++|+|+|+++.. |.. +|+++++|+|||||+|||||+|+++|+||||+++ +.+.||+..|
T Consensus 171 ~w~~~~~pwe~~r~~~~~~V~f~g~~~~~--g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW~a~-~~~~fd~~~f 247 (815)
T PRK14986 171 YWLEYGNPWEFKRHNTRYKVRFGGRIQQE--GKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQ-ASSEINLGKF 247 (815)
T ss_pred CccCCCCceeEecCCcEEEEEeCCEEEec--CceeEeeCCeeEEEEeCCccccCCCCCceEEEEEEEee-cCcccCHhhc
Confidence 99999999999999999999999999753 643 3999999999999999999999999999999999 6678999999
Q ss_pred CcchhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCccc
Q 004697 265 NDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPT 344 (736)
Q Consensus 265 ~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpa 344 (736)
+.|+|..++++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+ ++|+.|+++++|||||||||
T Consensus 248 n~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~agv~di~r~~~~~~--~~l~~l~~~v~ihlNDtHpa 325 (815)
T PRK14986 248 NQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLH--KTYDNLADKIAIHLNDTHPV 325 (815)
T ss_pred ccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHHHHHHHHHHHHhC--CCHhhCCcccEEEecCCcHH
Confidence 9999999999999999999999999999999999999999999999999999999988 57999999999999999999
Q ss_pred ccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcc
Q 004697 345 LAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLES 424 (736)
Q Consensus 345 laipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~ 424 (736)
|++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|++.+++.+|.+.+
T Consensus 326 ~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~~~~~ 405 (815)
T PRK14986 326 LSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTD 405 (815)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHHHHHHHhCCCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCC-cccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHH
Q 004697 425 KIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSK 503 (736)
Q Consensus 425 ~~~~~~ii~~~~~~~-~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~ 503 (736)
++.+|+||++ +++ +||||+||+++||+|||||+||++++++.||++|+.+||+||.+||||||+|||+.+|||+|++
T Consensus 406 ~~~~~sii~~--~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~P~kf~niTNGV~~rrWl~~~np~L~~ 483 (815)
T PRK14986 406 LLGRASIIDE--SNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPSLSA 483 (815)
T ss_pred HHhhhhcccc--CCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCCChhhHhhhcCHHHHH
Confidence 9999999987 333 8999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchh
Q 004697 504 IITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNI 583 (736)
Q Consensus 504 li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lni 583 (736)
||++++|+ +|.+|++++++|+++.+|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+
T Consensus 484 Li~~~ig~-~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heYKRq~LNi 562 (815)
T PRK14986 484 VLDEHIGR-TWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNV 562 (815)
T ss_pred HHHHhcCc-hhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhhhhhhHHH
Confidence 99999995 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhc
Q 004697 584 LGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLI 663 (736)
Q Consensus 584 l~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv 663 (736)
|++++||.+|++ +|.. +++|+||||||||||+|++||+|||+|+++|++|||||+++++|||||+|||+|++|++|+
T Consensus 563 l~~i~ry~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~vslAe~li 639 (815)
T PRK14986 563 LHVITRYNRIKA-DPDA--KWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLII 639 (815)
T ss_pred hhhHHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCHHHHHHhh
Confidence 999999999998 7753 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhhhccCC
Q 004697 664 PGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL 735 (736)
Q Consensus 664 ~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~~~y~~ 735 (736)
|||||||||||||+||||||||||||||+|||||+|||||||.++||++|+|+||++++||.++|++| |++
T Consensus 640 pg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~~~~~~-Y~~ 710 (815)
T PRK14986 640 PAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRRQG-YKP 710 (815)
T ss_pred hhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHHHHHcC-CCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999888 874
No 6
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=3e-200 Score=1696.53 Aligned_cols=609 Identities=53% Similarity=0.904 Sum_probs=548.7
Q ss_pred HHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcc
Q 004697 116 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 195 (736)
Q Consensus 116 aL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe 195 (736)
||++||+++++|+++|+||||||||||||||||||||||||+|++||||||+||+|+|+|.||+|+|.||+|+..|+|||
T Consensus 1 Al~~lg~~~~~l~~~E~da~LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe 80 (713)
T PF00343_consen 1 ALKELGFDLEELEEQEPDAGLGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWE 80 (713)
T ss_dssp HHHHTT--HHHHHTTS--EEESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTS
T ss_pred ChhHhCCCHHHHHhhCcCccccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEECCeEEEcCCCcee-eeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhHHHh
Q 004697 196 VVRHDVVFPVRFFGSVMVNPNGTRK-WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQ 274 (736)
Q Consensus 196 ~~~~~~~~~v~f~G~~~~~~~g~~~-~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~ 274 (736)
++|++.+|+|+|+|+++ ..+|+.. |+++++|+|||||+|||||++++||+||||+|+ ++++||+..|+.|+|.+|++
T Consensus 81 ~~r~~~~~~V~f~G~v~-~~~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~ 158 (713)
T PF00343_consen 81 IRRPDESYEVKFGGRVE-DDGGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVE 158 (713)
T ss_dssp EEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHH
T ss_pred EecCCceEEEeccceEE-ecCCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHH
Confidence 99999999999999998 3445544 999999999999999999999999999999999 88899999999999999999
Q ss_pred hhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHH
Q 004697 275 LHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLL 354 (736)
Q Consensus 275 ~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~HpalaipElmR~l 354 (736)
+++.+|+||++|||+|++++||+|||||||||++||+|||||+|++.+ .++++||++++||||||||||+||||||+|
T Consensus 159 ~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~lqdiir~~~~~~--~~~~~~~~~~~ihlNdtHpa~ai~ElmR~L 236 (713)
T PF00343_consen 159 EKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKSH--GDLREFPDKVVIHLNDTHPAFAIPELMRIL 236 (713)
T ss_dssp HHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTTHHHHHHHHH
T ss_pred HHHHhhceeeecCCCCccccchhhhhhhHhhhhhhHHHHHHHHHHHhC--CChHHCCcceEEeecCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 589999999999999999999999999999
Q ss_pred HHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccC
Q 004697 355 MDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDN 434 (736)
Q Consensus 355 ~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~ 434 (736)
||++|++|++||++|+++|+||||||||||+|+||++||+++||||+|||++||++|+..+...+|.+.+.+.+|+++++
T Consensus 237 ~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~ 316 (713)
T PF00343_consen 237 MDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEE 316 (713)
T ss_dssp HHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEET
T ss_pred HHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCcccc
Q 004697 435 NPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQW 514 (736)
Q Consensus 435 ~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W 514 (736)
++...||||+||+++||+|||||+||++++|+++|++|+++||++|.|||||||+|||++.|||+|++||++++| ++|
T Consensus 317 -~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG-~~W 394 (713)
T PF00343_consen 317 -GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIG-DDW 394 (713)
T ss_dssp -SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHT-SGG
T ss_pred -cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhc-ccc
Confidence 122399999999999999999999999999999999999999999999999999999999999999999999999 599
Q ss_pred ccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHH
Q 004697 515 VTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLK 594 (736)
Q Consensus 515 ~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~ 594 (736)
.+|++.|++|.++++|+.|+++|+++|++||.+|+++|+++.|+.+||+++||+|||||||||||+||+|++++||.+|+
T Consensus 395 ~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik 474 (713)
T PF00343_consen 395 RTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIK 474 (713)
T ss_dssp GCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCC
Q 004697 595 EMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIST 674 (736)
Q Consensus 595 ~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~ 674 (736)
+ +|+. ..+||||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||||++|++|+|||||||||||
T Consensus 475 ~-~p~~--~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~ 551 (713)
T PF00343_consen 475 N-NPNK--KIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPT 551 (713)
T ss_dssp H-STTS--CCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---
T ss_pred h-cccC--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCC
Confidence 8 7753 578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhhhccC
Q 004697 675 AGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG 734 (736)
Q Consensus 675 ~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~~~y~ 734 (736)
||+||||||||||||||+|||||+|||||||.+++|++|+|+||.+++||.+++++| |+
T Consensus 552 ~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev~~~~~~g-Y~ 610 (713)
T PF00343_consen 552 RPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEVEELRKNG-YN 610 (713)
T ss_dssp TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT--H
T ss_pred CCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHHHHHHhcC-CC
Confidence 999999999999999999999999999999999999999999999999999999887 75
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-180 Score=1535.90 Aligned_cols=640 Identities=48% Similarity=0.766 Sum_probs=605.4
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhhcC
Q 004697 28 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSL 107 (736)
Q Consensus 28 ~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~nL 107 (736)
..++|+..|..++.+..|+++..||+++||.|++..||+.+...|.+|++.+.+.+.|+|||+|||||+||++.|||+|+
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~yy~s~efL~grl~~~~l~n~ 84 (750)
T COG0058 5 RLEQLAYNLWWSLDTTAGKLFRDADPEDWYEALHNPVRELLAADWLRLNQLARDEDFKQVYYLSMEFLIGRLLGNNLWNL 84 (750)
T ss_pred cHHHHHHHHHHHHHHHhccChhhCCHHHHHHHhhHHHHHHHhcCHHHHHHhhcchhHHHHHHHHHHHHHHHhhhcchhhh
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccc
Q 004697 108 DIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDW 187 (736)
Q Consensus 108 g~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~W 187 (736)
|+++.++++|+++|++++|+.+.|+||++| ||||||||||||||||||+|++||||||+||||+|++.||||+|.||.|
T Consensus 85 g~~~~~~~~l~~~~~~~~e~~~~e~~p~lg-GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w 163 (750)
T COG0058 85 GIYDDVQEALKELGYFLMEFGEHESDPGLG-GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEW 163 (750)
T ss_pred cchHHHHhhHHhhhccHHHHhhcccCcccc-ccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhh
Confidence 999999999999999999999999999999 9999999999999999999999999999999999998899999999999
Q ss_pred cccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcc
Q 004697 188 LEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG 267 (736)
Q Consensus 188 l~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~ 267 (736)
+..++|||++++ . + |+|||+||+||++ ++|++|||+++++..+|.|..+|.+
T Consensus 164 ~~~~~pwe~~r~---------------~---------~---a~~~d~~V~g~~~-~~~~lrlW~a~~~~~~~~l~~~n~~ 215 (750)
T COG0058 164 LKYGNPWEFLRD---------------A---------E---GVPYDVPVPGYDN-RVVTLRLWQAQVGRVPLYLLDFNVG 215 (750)
T ss_pred hccCCcceeecc---------------c---------C---CceeeeeEEeccC-cEEEEEEEEEecCccceEeecCCCc
Confidence 999999998763 0 1 5899999999999 9999999999977556666556655
Q ss_pred hhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccH
Q 004697 268 QYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAI 347 (736)
Q Consensus 268 ~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpalai 347 (736)
++...+|+||++|||+|+ ++|||+||||||+||+|+|++++...++ +++.+ +.|||||||||++
T Consensus 216 ------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agvq~I~~~~~~~~~--~~~~~----~~~lNdtHpa~~i 279 (750)
T COG0058 216 ------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGVQDILARGHLEHH--DLDVL----ADHLNDTHPALAI 279 (750)
T ss_pred ------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHHHHHHHHhhhccc--cccch----hhhhcCCChhHhH
Confidence 578899999999999998 8999999999999999999999554442 35544 5779999999999
Q ss_pred HHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCccccc
Q 004697 348 PELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIP 427 (736)
Q Consensus 348 pElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~ 427 (736)
||+||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||.+|+..++...+++ ++.
T Consensus 280 ~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l~~~~~~~~~~--~~~ 357 (750)
T COG0058 280 PELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFLPEVRLLYLGD--LIR 357 (750)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhhHHHHhhcccc--ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987 677
Q ss_pred ccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHH
Q 004697 428 SMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITK 507 (736)
Q Consensus 428 ~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~ 507 (736)
+++++++ ||||+||+++|++|||||+||+++++++.|++|++++|++|.|||||||+|||+..|||.|++++++
T Consensus 358 ~~~~i~~------v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~~~~ 431 (750)
T COG0058 358 RGSPIEE------VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPRRWLAPANPGLADLLDE 431 (750)
T ss_pred cCCcccc------eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCchhhhhhhHHHHHHHhh
Confidence 8887753 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHH
Q 004697 508 WLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAI 587 (736)
Q Consensus 508 ~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i 587 (736)
.+|. .|..+++.++++..+++|+.+++.|+.+|.+||++|+++++++.|+.+||++|||||||||||||||+||+++++
T Consensus 432 ~ig~-~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~ 510 (750)
T COG0058 432 KIGD-EWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLLNLLDIE 510 (750)
T ss_pred hhhh-hhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHHhHhhHH
Confidence 9994 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhccccc
Q 004697 588 YRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSE 667 (736)
Q Consensus 588 ~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaD 667 (736)
.+|..|++ |. .+|+|+||||||||+|+.||+|||+|+++|+++|+ ++||||+|||||++|++||||||
T Consensus 511 ~ly~~i~~-d~-----~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~------~lkVvFl~nYdvslA~~iipa~D 578 (750)
T COG0058 511 RLYRILKE-DW-----VPRVQIIFAGKAHPADYAAKEIIKLINDVADVINN------KLKVVFLPNYDVSLAELLIPAAD 578 (750)
T ss_pred HHHHHHhc-CC-----CCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcc------cceEEEeCCCChhHHHhhccccc
Confidence 99998874 21 23677799999999999999999999999999975 77999999999999999999999
Q ss_pred ccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhhhcc
Q 004697 668 LSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKERED 733 (736)
Q Consensus 668 v~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~~~y 733 (736)
||||||+||+||||||||||||||+|||||||||||||.+.+|++|||+||++++|+.++++++.|
T Consensus 579 vweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~ 644 (750)
T COG0058 579 VWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYD 644 (750)
T ss_pred ccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccc
Confidence 999999999999999999999999999999999999999999999999999999999999987744
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=5.1e-133 Score=1166.77 Aligned_cols=512 Identities=26% Similarity=0.419 Sum_probs=456.8
Q ss_pred CceEEEEEchhccccchhHHhhcCCcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEe
Q 004697 84 PKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYG 163 (736)
Q Consensus 84 ~k~vyY~SmEfl~Gr~L~nnl~nLg~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~G 163 (736)
.+.++||||||+++.+|+ +||||||||||||||||||||+|++|||
T Consensus 85 ~~~~aYFs~E~gl~~~lp----------------------------------iYsGGLG~LAgd~lksasdLg~P~vgvG 130 (778)
T cd04299 85 PLVAAYFSMEFGLHESLP----------------------------------IYSGGLGILAGDHLKAASDLGLPLVGVG 130 (778)
T ss_pred CCeeEEeccccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCEEEEE
Confidence 456669999999999999 9999999999999999999999999999
Q ss_pred ecccccceeEEee-CCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCC
Q 004697 164 LRYRYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTK 242 (736)
Q Consensus 164 l~Y~~G~F~Q~i~-dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~ 242 (736)
|+|+||||+|+|+ ||||+|.|+.|...+.||+.. .+.+|+ +.++ .+|++|+
T Consensus 131 llY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~---------------~~~~G~------~~~v----~v~l~g~--- 182 (778)
T cd04299 131 LLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV---------------RDADGE------PVRV----SVELPGR--- 182 (778)
T ss_pred eCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE---------------ecCCCC------eEEE----EEeeCCC---
Confidence 9999999999999 999999999999999998741 234564 2233 4778998
Q ss_pred ceEEEEEEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcc
Q 004697 243 NTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK 322 (736)
Q Consensus 243 ~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~ 322 (736)
++++|+|+++++ ++++|++|++.+. |...+|.||.+|||+| +++||+||+|||+||++.+ |++ |
T Consensus 183 -~v~~rvw~~~vg--~v~lylLDtd~~~----n~~~~R~iT~~LYg~D-----~~~Rl~Qe~~Lg~agl~~L-r~l---g 246 (778)
T cd04299 183 -TVYARVWKAQVG--RVPLYLLDTDIPE----NSPDDRGITDRLYGGD-----QETRIQQEILLGIGGVRAL-RAL---G 246 (778)
T ss_pred -ceEEEEEEEEcC--CCCEEEecCCccc----cchhhcccccCCCCCc-----HHHHHHHHHHHHHHHHHHH-HHh---C
Confidence 789999999976 6999999999874 5677999999999988 5789999999999999874 332 2
Q ss_pred cCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHH
Q 004697 323 SGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 402 (736)
Q Consensus 323 g~~~l~~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ 402 (736)
.+|+|||||||||||+++|+||++++++|++|++||++|+.+||||||||+|||+|+||.++++++||+|++
T Consensus 247 --------~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~ 318 (778)
T cd04299 247 --------IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYAR 318 (778)
T ss_pred --------CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHH
Confidence 369999999999999999999999998899999999999999999999999999999999999999997764
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCC--
Q 004697 403 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK-- 480 (736)
Q Consensus 403 ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k-- 480 (736)
.++.+++.+..+++......++.|||+++||++|++|||||+||++++++ ||++|+..+|.+
T Consensus 319 ---------------~lgl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~-mf~~~~~g~p~~~~ 382 (778)
T cd04299 319 ---------------ELGLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSRE-MFAGLWPGFPVEEV 382 (778)
T ss_pred ---------------HcCCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHH-HhhhhhccCCcccC
Confidence 36777888878887543001247999999999999999999999999995 899888888765
Q ss_pred -CcccccccCccccccccChhHHHHHHHhcCccccccCchhHh--hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 004697 481 -LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV--GLRQFADNTELQAEWESAKMASKKHLADYIWRVT- 556 (736)
Q Consensus 481 -~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~--~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~- 556 (736)
|.+||||||+++|+ ||+++++|++++|+ +|.++++... +....++|+++ | ++|++||++|+++|++++
T Consensus 383 ~i~~ITNGVh~~~W~---~P~~~~l~~~~~g~-~w~~~~~~~~~~~~~~~i~d~~l---w-~~K~~~K~~L~~~v~~~~~ 454 (778)
T cd04299 383 PIGHVTNGVHVPTWV---APEMRELYDRYLGG-DWRERPTDPELWEAVDDIPDEEL---W-EVRQQLRRRLIEFVRRRLR 454 (778)
T ss_pred ceeceeCCcchhhhc---CHHHHHHHHHhcCc-chhhccchHHHHhhhcCCCcHHH---H-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 79999999999994 8998886432 23334778777 7 799999999999999876
Q ss_pred ----------------CCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCH
Q 004697 557 ----------------GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT 620 (736)
Q Consensus 557 ----------------g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~ 620 (736)
+..+||++||||||||||+|||++| +|++++||.+|+. +|. .|+||||||||||+|+
T Consensus 455 ~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~L-il~dl~rl~~il~-~~~-----~pvQ~IfaGKAhP~d~ 527 (778)
T cd04299 455 RQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATL-LLRDPERLKRLLN-DPE-----RPVQFIFAGKAHPADE 527 (778)
T ss_pred hhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCccch
Confidence 5669999999999999999999999 9999999999986 443 4999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccc
Q 004697 621 NAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 700 (736)
Q Consensus 621 ~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDG 700 (736)
.||++||+|+++++ ||++++ ||||+|||||++||+|+||||||||||+||+||||||||||||||+|++||+||
T Consensus 528 ~gK~iIk~i~~~a~----~p~~~~--kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDG 601 (778)
T cd04299 528 PGKELIQEIVEFSR----RPEFRG--RIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDG 601 (778)
T ss_pred HHHHHHHHHHHHHh----CcCCCC--cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccC
Confidence 99999999999995 999999 999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhcCCccEEEecccc
Q 004697 701 ANVEIRQEIGEENFFLFGAVA 721 (736)
Q Consensus 701 a~vEi~e~~g~~n~f~FG~~~ 721 (736)
||.|..+ .+|||.||...
T Consensus 602 ww~E~~~---g~nGwaig~~~ 619 (778)
T cd04299 602 WWDEGYD---GENGWAIGDGD 619 (778)
T ss_pred ccccccC---CCCceEeCCCc
Confidence 9998773 58999999943
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=2e-131 Score=1134.84 Aligned_cols=507 Identities=25% Similarity=0.414 Sum_probs=455.8
Q ss_pred EEEEEchhccccchhHHhhcCCcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecc
Q 004697 87 TYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRY 166 (736)
Q Consensus 87 vyY~SmEfl~Gr~L~nnl~nLg~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y 166 (736)
|+||||||+++.+|+ +||||||||||||||||||||+|++||||+|
T Consensus 1 ~ayf~~E~g~~~~~p----------------------------------~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y 46 (601)
T TIGR02094 1 VAYFSMEYGLHESLP----------------------------------IYSGGLGVLAGDHLKSASDLGLPLVAVGLLY 46 (601)
T ss_pred CeEEeeccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 689999999999999 9999999999999999999999999999999
Q ss_pred cccceeEEee-CCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceE
Q 004697 167 RYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTI 245 (736)
Q Consensus 167 ~~G~F~Q~i~-dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~ 245 (736)
+||||+|+|+ ||||+|.|++|+..+.||+. | .+.+|+ . ++|++|++|. ++
T Consensus 47 ~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~--------~-------~~~~g~-------~---~~~~v~i~g~----~~ 97 (601)
T TIGR02094 47 KQGYFRQRLDEDGWQQEAYPNNDFESLPIEK--------V-------LDTDGK-------W---LKISVRIRGR----DV 97 (601)
T ss_pred CCCceeEEECCCCceeecCCccccCCCceEE--------E-------ecCCCC-------e---EEEEEecCCc----EE
Confidence 9999999999 99999999999999999975 1 234564 2 5899999995 99
Q ss_pred EEEEEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCc
Q 004697 246 SLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGR 325 (736)
Q Consensus 246 ~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~ 325 (736)
++|+|+++++ ++++|++|++. ++|...+|+||.+|||+| +++|++||+|||+|++|++ + +.+
T Consensus 98 ~~rlw~~~~~--~v~lylld~~~----~~n~~~~R~it~~LY~~D-----~~~R~~Qe~fl~~a~l~~l-~---~l~--- 159 (601)
T TIGR02094 98 YAKVWRVQVG--RVPLYLLDTNI----PENSEDDRWITGRLYGGD-----KEMRIAQEIVLGIGGVRAL-R---ALG--- 159 (601)
T ss_pred EEEEEEEEeC--CCCEEEecCCC----cccchhhcCccCCCCCCC-----HHHHHHHHHHHHHHHHHHH-H---HcC---
Confidence 9999999975 79999999987 456778999999999988 5789999999999999974 1 112
Q ss_pred ccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHH
Q 004697 326 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIE 405 (736)
Q Consensus 326 ~l~~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~ 405 (736)
.+|++||||||||||+++||||+++ +++++|++||++|+.+|+||||||+|||+|+||.+++.++||+ ++++.
T Consensus 160 -----~~pdviH~ND~Htal~~~el~r~l~-~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~-~~~~~ 232 (601)
T TIGR02094 160 -----IDPDVYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGD-YAANL 232 (601)
T ss_pred -----CCceEEEeCCchHHHHHHHHHHHHH-HcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhh-hhhHh
Confidence 4899999999999999999999999 7899999999999999999999999999999999999999998 56777
Q ss_pred HHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCC---Cc
Q 004697 406 EIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK---LQ 482 (736)
Q Consensus 406 ~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k---~~ 482 (736)
+|+.+++..+...++. .+++|||+++||++|++|||||++|+++++ .+|++|++++|.+ |.
T Consensus 233 gl~~~~~~~~~~~~~~---------------~~~~vnm~~lai~~S~~vngVS~lh~~v~~-~l~~~l~~~~~~~~~~i~ 296 (601)
T TIGR02094 233 GLPREQLLALGRENPD---------------DPEPFNMTVLALRLSRIANGVSKLHGEVSR-KMWQFLYPGYEEEEVPIG 296 (601)
T ss_pred CCCHHHHHhhhhhccC---------------ccCceeHHHHHHHhCCeeeeecHHHHHHHH-HHHHhhhhhcccccCCcc
Confidence 8887666554333221 124899999999999999999999999998 7899999999887 99
Q ss_pred ccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---
Q 004697 483 NKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVT--- 559 (736)
Q Consensus 483 ~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~--- 559 (736)
+||||||+++|. ||.+..|+++++++ +|.+++++++.|.++ + ....++++++|++||++|+++|++++|..
T Consensus 297 gItNGId~~~W~---~~~~~~l~~~y~~~-~w~~~~~~~~~~~~~-~-~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~ 370 (601)
T TIGR02094 297 YVTNGVHNPTWV---APELRDLYERYLGE-NWRELLADEELWEAI-D-DIPDEELWEVHLKLKARLIDYIRRRLRERWLR 370 (601)
T ss_pred ceeCCccccccC---CHHHHHHHHHhCCc-chhccchhhhhhhhc-c-cccHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999997 79999999999995 899999998888764 2 23334455899999999999999977765
Q ss_pred --------------CCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHH
Q 004697 560 --------------IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 625 (736)
Q Consensus 560 --------------ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~i 625 (736)
+||++||||||||||+|||++| ||++++||.+|+. ||. .|+||||+|||||+|++||++
T Consensus 371 ~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dL-il~~i~~l~~i~~-~~~-----~pvq~V~~Gka~p~d~~gk~~ 443 (601)
T TIGR02094 371 RGADAAILMATDRFLDPDVLTIGFARRFATYKRADL-IFRDLERLARILN-NPE-----RPVQIVFAGKAHPADGEGKEI 443 (601)
T ss_pred ccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCcccchHHHH
Confidence 9999999999999999999999 9999999999987 543 499999999999999999999
Q ss_pred HHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhh
Q 004697 626 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (736)
Q Consensus 626 Ik~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi 705 (736)
|++|+++++ ||++++ ||+|++|||+++||+|+||||||||||++|+|||||||||||+||+|++||+||||+|.
T Consensus 444 i~~i~~la~----~~~~~~--kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 444 IQRIVEFSK----RPEFRG--RIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEG 517 (601)
T ss_pred HHHHHHHHh----cccCCC--CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCccccc
Confidence 999999995 899999 99999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhcCCccEEEecc
Q 004697 706 RQEIGEENFFLFGA 719 (736)
Q Consensus 706 ~e~~g~~n~f~FG~ 719 (736)
.+ ++|||.||+
T Consensus 518 ~~---~~nGf~f~~ 528 (601)
T TIGR02094 518 YD---GDNGWAIGD 528 (601)
T ss_pred CC---CCcEEEECC
Confidence 63 479999995
No 10
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=365.73 Aligned_cols=334 Identities=19% Similarity=0.176 Sum_probs=273.9
Q ss_pred ccccccCcchhhHHHhhhhhhhcccccccCC-CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEe
Q 004697 259 FNLFQFNDGQYESAAQLHSRAQQICAVLYPG-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQ 337 (736)
Q Consensus 259 ~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~-D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viH 337 (736)
++++++|.+.+++. . -..+|+. |+.+ ++.||+.|+++.+ ..+ ... +.|++||
T Consensus 83 v~~~lid~~~~f~r--------~-~~~~~~~~d~~~--------Rf~~F~~a~~~~~-----~~~----~~~-~~pDIvH 135 (487)
T COG0297 83 VDLYLIDNPALFKR--------P-DSTLYGYYDNAE--------RFAFFSLAAAELA-----PLG----LIS-WLPDIVH 135 (487)
T ss_pred CcEEEecChhhcCc--------c-ccccCCCCcHHH--------HHHHHHHHHHHHh-----hhc----CCC-CCCCEEE
Confidence 67777887777751 0 2345553 6555 8999999998751 011 112 6899999
Q ss_pred eCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHH-hhchhHHHHHHHHHHHHHHHHH
Q 004697 338 LNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMW-KLLPRHMEIIEEIDKRFIAMVR 416 (736)
Q Consensus 338 lND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~-~~lpr~~~ii~~in~~~~~~~~ 416 (736)
+||||++|+ |.+|+.... . .....+|||+||+..+|+ |+...+. .-||...
T Consensus 136 ~hDWqt~L~-~~~lk~~~~--------~--~~~i~tVfTIHNl~~qG~--~~~~~~~~lgLp~~~--------------- 187 (487)
T COG0297 136 AHDWQTGLL-PAYLKQRYR--------S--GYIIPTVFTIHNLAYQGL--FRLQYLEELGLPFEA--------------- 187 (487)
T ss_pred eecHHHHHH-HHHHhhccc--------c--cccCCeEEEEeeceeecc--cchhhHHHhcCCHHH---------------
Confidence 999999999 888877530 1 157789999999999999 8855555 3366321
Q ss_pred HhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhc-CccccC---cCCCcccccccCccc
Q 004697 417 STRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSLW---PNKLQNKTNGITPRR 492 (736)
Q Consensus 417 ~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~-~~~~l~---p~k~~~iTNGV~~rr 492 (736)
+ .+-..+. .+.+++++.+|..|+.||+||++|++++.+..|+ ++.++. ..++++|.||||.-.
T Consensus 188 ---------~-~~~~l~~---~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~ 254 (487)
T COG0297 188 ---------Y-ASFGLEF---YGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDL 254 (487)
T ss_pred ---------h-hhceeee---cCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecc
Confidence 1 1111221 2478999999999999999999999999988887 555554 678999999999999
Q ss_pred cccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccc
Q 004697 493 WLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR 572 (736)
Q Consensus 493 Wl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR 572 (736)
| ||+.+.++...+. .++ | ..|.+||..|.+ ++|++.+.+.++.+++.|
T Consensus 255 w----np~~d~~~~~~y~-----------------~~~------~-~~k~~nk~~L~~----~~gL~~~~~~pl~~~vsR 302 (487)
T COG0297 255 W----NPETDPYIAANYS-----------------AEV------L-PAKAENKVALQE----RLGLDVDLPGPLFGFVSR 302 (487)
T ss_pred c----CcccccchhccCC-----------------ccc------h-hhhHHHHHHHHH----HhCCCCCCCCcEEEEeec
Confidence 9 9999999886665 333 5 369999999999 999999999999999999
Q ss_pred cccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEc
Q 004697 573 IHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVP 652 (736)
Q Consensus 573 ~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFle 652 (736)
+++||+.+| ++.+++.+.+ . ..|+|+.|++.|.++. .+..+++.+ ++ +|.+..
T Consensus 303 l~~QKG~dl-~~~~i~~~l~--~----------~~~~vilG~gd~~le~------~~~~la~~~------~~--~~~~~i 355 (487)
T COG0297 303 LTAQKGLDL-LLEAIDELLE--Q----------GWQLVLLGTGDPELEE------ALRALASRH------PG--RVLVVI 355 (487)
T ss_pred cccccchhH-HHHHHHHHHH--h----------CceEEEEecCcHHHHH------HHHHHHHhc------Cc--eEEEEe
Confidence 999999999 9999998865 3 3799999999999999 999999988 66 899999
Q ss_pred CCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccc----cchhhhhh--cCCccEEEecccc
Q 004697 653 NYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG----ANVEIRQE--IGEENFFLFGAVA 721 (736)
Q Consensus 653 nY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDG----a~vEi~e~--~g~~n~f~FG~~~ 721 (736)
.|++.+|++|++|||+|++||+ +||||.++|.+|++|+|+|++..| +++...+. -|.+|||+|-.+.
T Consensus 356 ~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 356 GYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred eecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 9999999999999999999999 999999999999999999999999 88877776 6789999998874
No 11
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.4e-38 Score=369.62 Aligned_cols=448 Identities=14% Similarity=0.171 Sum_probs=320.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhhcCCcHHHHHHHHHHcCCChHHHHhh
Q 004697 51 FEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQ 130 (736)
Q Consensus 51 a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~nLg~~~~~~eaL~~lg~~l~~l~~~ 130 (736)
....++|..+...--..+......... .....+.+|-++|.|..
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~mkILfVasE~a----------------------------------- 492 (977)
T PLN02939 449 GRIREAYLSCKGKNEREAVENFLKLTL-SGTSSGLHIVHIAAEMA----------------------------------- 492 (977)
T ss_pred hhHHHHHHHHhcCchHHHHHHHHHhcc-CCCCCCCEEEEEEcccc-----------------------------------
Confidence 344556666555544444444443332 11234578999999982
Q ss_pred hccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004697 131 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 210 (736)
Q Consensus 131 E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~ 210 (736)
|-.=.||||--++..=++++.+|.-+.-+-=.|. ++..+.+. + ....+
T Consensus 493 ---P~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~-~i~~~~~~---------------~---~~~~~---------- 540 (977)
T PLN02939 493 ---PVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYD-CMQYDQIR---------------N---LKVLD---------- 540 (977)
T ss_pred ---cccccccHHHHHHHHHHHHHHcCCeEEEEeCCCc-ccChhhhh---------------c---ccccc----------
Confidence 2244899999999999999999988777776665 22211000 0 00000
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcc---hhhHHHhhhhhhhccccccc
Q 004697 211 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG---QYESAAQLHSRAQQICAVLY 287 (736)
Q Consensus 211 ~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~---~y~~a~~~~~~~~~It~~LY 287 (736)
....+++.| .....++|...++ ++++|+++.. .||. +..+|
T Consensus 541 -------------------~~~~~~~~g----~~~~~~v~~~~~~--GV~vyfId~~~~~~fF~-----------R~~iY 584 (977)
T PLN02939 541 -------------------VVVESYFDG----NLFKNKIWTGTVE--GLPVYFIEPQHPSKFFW-----------RAQYY 584 (977)
T ss_pred -------------------eEEEEeecC----ceeEEEEEEEEEC--CeeEEEEecCCchhccC-----------CCCCC
Confidence 000111111 1223578887654 6888888742 3676 66789
Q ss_pred CC-CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHH
Q 004697 288 PG-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEA 365 (736)
Q Consensus 288 ~~-D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A 365 (736)
+. |+.+ ++.|||.|+++.+ ..+ ++|+||||||||+||+.|-+++... ..+
T Consensus 585 g~~Dn~~--------RF~~FsrAaLe~~-------------~~~~~~PDIIH~HDW~TaLV~pll~~~y~-~~~------ 636 (977)
T PLN02939 585 GEHDDFK--------RFSYFSRAALELL-------------YQSGKKPDIIHCHDWQTAFVAPLYWDLYA-PKG------ 636 (977)
T ss_pred CCccHHH--------HHHHHHHHHHHHH-------------HhcCCCCCEEEECCccHHHHHHHHHHHHh-hcc------
Confidence 64 7766 9999999999753 222 6899999999999998776665432 122
Q ss_pred HhhcCceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCccccc
Q 004697 366 WDITTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMA 444 (736)
Q Consensus 366 ~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~-lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa 444 (736)
+ ....+|||+||+.++|. ||.+.+... || ++.+.+...++++ ..+.+|+.
T Consensus 637 ~--~~~ktVfTIHNl~yQG~--f~~~~l~~lGL~------------------------~~~l~~~d~le~~-~~~~iN~L 687 (977)
T PLN02939 637 F--NSARICFTCHNFEYQGT--APASDLASCGLD------------------------VHQLDRPDRMQDN-AHGRINVV 687 (977)
T ss_pred C--CCCcEEEEeCCCcCCCc--CCHHHHHHcCCC------------------------HHHccChhhhhhc-cCCchHHH
Confidence 1 34579999999999998 887766522 33 1111111111110 12489999
Q ss_pred chhhhccchhHhHHHHhHHHHHhhhhc-CccccC---cCCCcccccccCccccccccChhHHHHHHHhcCccccccCchh
Q 004697 445 NLCVVSAHTVNGVAQLHSDILKADLFA-DYVSLW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDL 520 (736)
Q Consensus 445 ~lai~~S~~vNgVS~lH~~vlk~~~f~-~~~~l~---p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~ 520 (736)
+.||++|+.|++||+.|++++++ .++ ++..++ ++++.+|.||||+..| ||..+++|...++
T Consensus 688 K~GIv~AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~w----nPatD~~L~~~Ys---------- 752 (977)
T PLN02939 688 KGAIVYSNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTW----NPSTDRFLKVQYN---------- 752 (977)
T ss_pred HHHHHhCCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhc----CCccccccccccC----------
Confidence 99999999999999999999987 555 555544 6889999999999999 8999999888887
Q ss_pred HhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCC-CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcc
Q 004697 521 LVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTID-PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQ 599 (736)
Q Consensus 521 l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ld-p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~ 599 (736)
++| | +.|..||..|.+ ++|++.+ ++.+++++|.|++++|+.++ ++..+.++.+ .
T Consensus 753 -------~~d------l-~GK~~nK~aLRk----elGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~Ll~--~---- 807 (977)
T PLN02939 753 -------AND------L-QGKAANKAALRK----QLGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKTAE--L---- 807 (977)
T ss_pred -------hhh------h-hhhhhhhHHHHH----HhCCCcccccceEEEEeecCCcccChHH-HHHHHHHHhh--c----
Confidence 555 7 699999999877 9998764 78899999999999999999 8888776543 1
Q ss_pred cccCCCCeEEEEEecC-CCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCcc
Q 004697 600 ERKKTTPRTIMIGGKA-FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGME 678 (736)
Q Consensus 600 ~~~~~~P~q~If~GKA-~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~E 678 (736)
+++||++|.+ .|.+.. .+..+++.+. ..+ +|.|+..|+-.+++.+++|||++++||+ +|
T Consensus 808 ------dvqLVIvGdGp~~~~e~------eL~~La~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmPSr--~E 867 (977)
T PLN02939 808 ------GGQFVLLGSSPVPHIQR------EFEGIADQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIPSM--FE 867 (977)
T ss_pred ------CCEEEEEeCCCcHHHHH------HHHHHHHHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEECCC--cc
Confidence 4689999988 454433 5666666552 245 7999999999999999999999999999 99
Q ss_pred CCCcchhhhhhcCceeEEeccccchhhhhhc-------CCccEEEecc
Q 004697 679 ASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLFGA 719 (736)
Q Consensus 679 ASGTs~MKa~lNGal~i~tlDGa~vEi~e~~-------g~~n~f~FG~ 719 (736)
+||.+.|.||.+|+++|+|-.|-..|...+. +.+|||+|..
T Consensus 868 PfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~ 915 (977)
T PLN02939 868 PCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLT 915 (977)
T ss_pred CCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecC
Confidence 9999999999999999999999665544332 2379999975
No 12
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=2.7e-37 Score=350.04 Aligned_cols=404 Identities=17% Similarity=0.235 Sum_probs=296.6
Q ss_pred cccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEE
Q 004697 133 DAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVM 212 (736)
Q Consensus 133 d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~ 212 (736)
.|=.=.||||--++..=++++.+|.-+.-+-=+|.. +.+ ..+|. .. ..
T Consensus 16 ~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~-~~~----~~~~~---------------~~--~~---------- 63 (489)
T PRK14098 16 SPFVRVSALADFMASFPQALEEEGFEARIMMPKYGT-IND----RKFRL---------------HD--VL---------- 63 (489)
T ss_pred hhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCc-hhh----hhhcc---------------cc--ce----------
Confidence 344568999999999999999999876655555542 110 00110 00 00
Q ss_pred EcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccCC---
Q 004697 213 VNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG--- 289 (736)
Q Consensus 213 ~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~--- 289 (736)
.+ ..+++++.++ +...+++.+..+..++++|+++++.|++ +..+|++
T Consensus 64 -------------~~--~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~f~-----------r~~~y~~~~~ 113 (489)
T PRK14098 64 -------------RL--SDIEVPLKEK----TDLLHVKVTALPSSKIQTYFLYNEKYFK-----------RNGLFTDMSL 113 (489)
T ss_pred -------------EE--EEEEEeecCe----eEEEEEEEecccCCCceEEEEeCHHHcC-----------CCCcCCCCcc
Confidence 00 1112222221 2333444443333358899999999997 6678964
Q ss_pred -----CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChH
Q 004697 290 -----DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWD 363 (736)
Q Consensus 290 -----D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~viHlND~HpalaipElmR~l~d~~gl~~d 363 (736)
|+.+ ++.||+.|+++. ++.+ ++|++||+||||+|++ |-+++..... .
T Consensus 114 g~~~~d~~~--------rf~~f~~a~l~~-------------~~~~~~~pDiiH~hdw~t~l~-~~~l~~~~~~-----~ 166 (489)
T PRK14098 114 GGDLKGSAE--------KVIFFNVGVLET-------------LQRLGWKPDIIHCHDWYAGLV-PLLLKTVYAD-----H 166 (489)
T ss_pred CCCCCcHHH--------HHHHHHHHHHHH-------------HHhcCCCCCEEEecCcHHHHH-HHHHHHHhhh-----c
Confidence 6666 999999999875 2223 5899999999999999 7788765532 1
Q ss_pred HHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccc
Q 004697 364 EAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRM 443 (736)
Q Consensus 364 ~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnM 443 (736)
..+ .+..+|||+||+.++|. ||...+..++|... +..+ +. ..+.+|+
T Consensus 167 ~~~--~~~~~V~TiHn~~~qg~--~~~~~~~~~~~~~~------------------------~~~~---~~--~~~~~n~ 213 (489)
T PRK14098 167 EFF--KDIKTVLTIHNVYRQGV--LPFKVFQKLLPEEV------------------------CSGL---HR--EGDEVNM 213 (489)
T ss_pred ccc--CCCCEEEEcCCCcccCC--CCHHHHHHhCCHHh------------------------hhhh---hh--cCCcccH
Confidence 222 46789999999999998 88887765555221 0011 00 0237899
Q ss_pred cchhhhccchhHhHHHHhHHHHHhh-hhc-CccccC---cCCCcccccccCccccccccChhHHHHHHHhcCccccccCc
Q 004697 444 ANLCVVSAHTVNGVAQLHSDILKAD-LFA-DYVSLW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNL 518 (736)
Q Consensus 444 a~lai~~S~~vNgVS~lH~~vlk~~-~f~-~~~~l~---p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~ 518 (736)
.+.|+..|+.|++||+.+++++++. .++ ++..++ +.++..|.||||...| ||..+..+.+.++
T Consensus 214 lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~----~p~~d~~~~~~~~-------- 281 (489)
T PRK14098 214 LYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQW----NPSTDKLIKKRYS-------- 281 (489)
T ss_pred HHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCcccccc----CCcccccccccCC--------
Confidence 9999999999999999999999863 333 343332 6789999999999999 7887766666665
Q ss_pred hhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCc
Q 004697 519 DLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSP 598 (736)
Q Consensus 519 ~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~ 598 (736)
+++ + +.|..||..|.+ ++|++.+++.++++++.|+.++|+.++ ++..+.++.+ .
T Consensus 282 ---------~~~------~-~~k~~~k~~l~~----~lgl~~~~~~~~i~~vgRl~~~KG~d~-li~a~~~l~~--~--- 335 (489)
T PRK14098 282 ---------IER------L-DGKLENKKALLE----EVGLPFDEETPLVGVIINFDDFQGAEL-LAESLEKLVE--L--- 335 (489)
T ss_pred ---------cch------h-hhHHHHHHHHHH----HhCCCCccCCCEEEEeccccccCcHHH-HHHHHHHHHh--c---
Confidence 333 5 688999998887 999999999999999999999999999 9888877643 1
Q ss_pred ccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCcc
Q 004697 599 QERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGME 678 (736)
Q Consensus 599 ~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~E 678 (736)
+++|++.|.+.+.++. .+.++++.+ ++ +|.|+..|+.++++.++++||+++++|+ .|
T Consensus 336 -------~~~lvivG~G~~~~~~------~l~~l~~~~------~~--~V~~~g~~~~~~~~~~~a~aDi~l~PS~--~E 392 (489)
T PRK14098 336 -------DIQLVICGSGDKEYEK------RFQDFAEEH------PE--QVSVQTEFTDAFFHLAIAGLDMLLMPGK--IE 392 (489)
T ss_pred -------CcEEEEEeCCCHHHHH------HHHHHHHHC------CC--CEEEEEecCHHHHHHHHHhCCEEEeCCC--CC
Confidence 5799999988655444 666666644 35 7999999999999999999999999999 99
Q ss_pred CCCcchhhhhhcCceeEEeccccchhhhhhcC--CccEEEecc
Q 004697 679 ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG--EENFFLFGA 719 (736)
Q Consensus 679 ASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g--~~n~f~FG~ 719 (736)
+||+++|.+|.+|+++|+|..|...|...+.. .+|||+|..
T Consensus 393 ~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~ 435 (489)
T PRK14098 393 SCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHD 435 (489)
T ss_pred CchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCC
Confidence 99999999999999999999997766554332 369999965
No 13
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=9.5e-35 Score=329.07 Aligned_cols=340 Identities=19% Similarity=0.191 Sum_probs=257.6
Q ss_pred EEEEEEeecCCCcccccccCcchhhHHHhhhhhhhccccc-ccCC-------CCcchhhhhhhhhhhHhhhhhHHHHHHH
Q 004697 246 SLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAV-LYPG-------DSTEEGKLLRLKQQFFLCSASLQDMILR 317 (736)
Q Consensus 246 ~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~-LY~~-------D~~~~Gk~lRLkQe~fl~~a~lqdi~r~ 317 (736)
..++|...++ .+++|+++++.|++ +.. +|++ |+.+ ++.|||.|+++.+ +.
T Consensus 70 ~~~~~~~~~~--~v~~~~~~~~~~f~-----------r~~~~y~~~~~~~~~d~~~--------rf~~f~~a~~~~~-~~ 127 (485)
T PRK14099 70 PARLLAARAG--GLDLFVLDAPHLYD-----------RPGNPYVGPDGKDWPDNAQ--------RFAALARAAAAIG-QG 127 (485)
T ss_pred eEEEEEEEeC--CceEEEEeChHhhC-----------CCCCCCCCccCCCCCcHHH--------HHHHHHHHHHHHH-hh
Confidence 3578887654 68899999999986 443 6742 6776 9999999998742 11
Q ss_pred HHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhh-
Q 004697 318 FKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKL- 396 (736)
Q Consensus 318 ~~~~~g~~~l~~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~- 396 (736)
+..-++|++||+||||++++ |-+++... ..+..+|||+||+..+|. ||..++..+
T Consensus 128 ---------~~~~~~pDIiH~Hdw~~~l~-~~~l~~~~------------~~~~~~V~TiHn~~~qg~--~~~~~~~~~~ 183 (485)
T PRK14099 128 ---------LVPGFVPDIVHAHDWQAGLA-PAYLHYSG------------RPAPGTVFTIHNLAFQGQ--FPRELLGALG 183 (485)
T ss_pred ---------hccCCCCCEEEECCcHHHHH-HHHHHhCC------------CCCCCEEEeCCCCCCCCc--CCHHHHHHcC
Confidence 11115899999999999998 76665310 124569999999999998 887766532
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhc-Cccc
Q 004697 397 LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVS 475 (736)
Q Consensus 397 lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~-~~~~ 475 (736)
+| ++.+ ....++. .+.+|+.+.++..|+.|++||+.+++.+++..++ ++..
T Consensus 184 ~~------------------------~~~~-~~~~~~~---~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~ 235 (485)
T PRK14099 184 LP------------------------PSAF-SLDGVEY---YGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDG 235 (485)
T ss_pred CC------------------------hHHc-Cchhhhh---CCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHH
Confidence 22 1111 1111111 2467999999999999999999999999865443 3433
Q ss_pred c---CcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHH
Q 004697 476 L---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYI 552 (736)
Q Consensus 476 l---~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i 552 (736)
+ -++++..|.|||++..| ||..++.+...++ +++ + +.|..||..|.+
T Consensus 236 ~l~~~~~ki~vI~NGID~~~f----~p~~~~~~~~~~~-----------------~~~------~-~~k~~~k~~l~~-- 285 (485)
T PRK14099 236 LLRQRADRLSGILNGIDTAVW----NPATDELIAATYD-----------------VET------L-AARAANKAALQA-- 285 (485)
T ss_pred HHHhhCCCeEEEecCCchhhc----cccccchhhhcCC-----------------hhH------H-HhHHHhHHHHHH--
Confidence 3 36789999999999999 8988877776665 333 5 688899988876
Q ss_pred HHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHH
Q 004697 553 WRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDV 632 (736)
Q Consensus 553 ~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~l 632 (736)
++|++.+++.+++++|.|+.++|+.++ ++..+.++.+ . +.++|+.|.+.+.++. .+.++
T Consensus 286 --~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~l~~--~----------~~~lvivG~G~~~~~~------~l~~l 344 (485)
T PRK14099 286 --RFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPTLLG--E----------GAQLALLGSGDAELEA------RFRAA 344 (485)
T ss_pred --HcCCCcccCCcEEEEEecCCccccHHH-HHHHHHHHHh--c----------CcEEEEEecCCHHHHH------HHHHH
Confidence 999988889999999999999999999 9888877643 2 4689999998654443 55666
Q ss_pred HHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhc---
Q 004697 633 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI--- 709 (736)
Q Consensus 633 a~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~--- 709 (736)
++.. ++ +++++.+|+..+++++.++||++++||+ +|+||.+.|.||..|+++|+|..|...|+..+.
T Consensus 345 ~~~~------~~--~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~ 414 (485)
T PRK14099 345 AQAY------PG--QIGVVIGYDEALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEM 414 (485)
T ss_pred HHHC------CC--CEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccc
Confidence 6543 34 6777788999999999999999999999 999999999999999999999988766544332
Q ss_pred ----CCccEEEeccc
Q 004697 710 ----GEENFFLFGAV 720 (736)
Q Consensus 710 ----g~~n~f~FG~~ 720 (736)
|.+|||+|...
T Consensus 415 ~~~~~~~~G~l~~~~ 429 (485)
T PRK14099 415 AIATGVATGVQFSPV 429 (485)
T ss_pred ccccCCCceEEeCCC
Confidence 33799999753
No 14
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=3e-34 Score=322.43 Aligned_cols=401 Identities=17% Similarity=0.212 Sum_probs=293.9
Q ss_pred ccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEE
Q 004697 134 AALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV 213 (736)
Q Consensus 134 ~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~ 213 (736)
|-.-.||||.-.++.-++++.+|.-+.-+.-+|.... + .|... . ++.
T Consensus 12 P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~------~--------~~~~~-----~-------~~~------- 58 (473)
T TIGR02095 12 PFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIE------D--------EVDDQ-----V-------KVV------- 58 (473)
T ss_pred cccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChh------h--------hhccC-----e-------EEE-------
Confidence 4456899999999999999999998888887777531 0 00000 0 000
Q ss_pred cCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhHHHhhhhhhhccc-ccccCC---
Q 004697 214 NPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQIC-AVLYPG--- 289 (736)
Q Consensus 214 ~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It-~~LY~~--- 289 (736)
....+++.|. ...+++|...++ ++++|+++++.|++ + ..+|++
T Consensus 59 ----------------~~~~~~~~~~----~~~~~~~~~~~~--~v~~~~i~~~~~~~-----------r~~~~y~~~~~ 105 (473)
T TIGR02095 59 ----------------ELVDLSVGPR----TLYVKVFEGVVE--GVPVYFIDNPSLFD-----------RPGGIYGDDYP 105 (473)
T ss_pred ----------------EEEEEeecCc----eeEEEEEEEEEC--CceEEEEECHHHcC-----------CCCCCCCCCCC
Confidence 1112222332 556788887754 68899999888775 4 359984
Q ss_pred CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhc
Q 004697 290 DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDIT 369 (736)
Q Consensus 290 D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~ 369 (736)
|+. .++.+|+.|+++.+. + .+ .+|++||+||||++++ +-+++..... .
T Consensus 106 d~~--------~r~~~f~~a~~~~~~-~---~~--------~~~DiiH~hdw~~~~~-~~~l~~~~~~-----------~ 153 (473)
T TIGR02095 106 DNA--------ERFAFFSRAAAELLS-G---LG--------WQPDVVHAHDWHTALV-PALLKAVYRP-----------N 153 (473)
T ss_pred CHH--------HHHHHHHHHHHHHHH-h---cC--------CCCCEEEECCcHHHHH-HHHHHhhccC-----------C
Confidence 443 378999999987531 1 11 5789999999999998 6666654320 1
Q ss_pred CceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhh
Q 004697 370 TRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCV 448 (736)
Q Consensus 370 ~~~~vfT~HT~~peg~E~~p~~l~~~~-lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai 448 (736)
+..+|||+|++.++|. ||...+..+ +| +..+ .....+. .+.+||.+.++
T Consensus 154 ~~~~v~TiH~~~~~g~--~~~~~~~~~~~~------------------------~~~~-~~~~~~~---~~~~~~~k~~~ 203 (473)
T TIGR02095 154 PIKTVFTIHNLAYQGV--FPADDFSELGLP------------------------PEYF-HMEGLEF---YGRVNFLKGGI 203 (473)
T ss_pred CCCEEEEcCCCccCCc--CCHHHHHHcCCC------------------------hHHc-Cchhhhc---CCchHHHHHHH
Confidence 4679999999999997 887765531 22 1111 1111111 23789999999
Q ss_pred hccchhHhHHHHhHHHHHhhhhc-Ccccc---CcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhh
Q 004697 449 VSAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (736)
Q Consensus 449 ~~S~~vNgVS~lH~~vlk~~~f~-~~~~l---~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l 524 (736)
..|+.|++||+.|++.+++..++ ++..+ -+.++..|.|||+..+| ||..+..+...+.
T Consensus 204 ~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~----~p~~~~~~~~~~~-------------- 265 (473)
T TIGR02095 204 VYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVW----NPATDPYLKANYS-------------- 265 (473)
T ss_pred HhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCcccc----CCCCCcccccCcC--------------
Confidence 99999999999999998765444 33322 36789999999999999 7887666654444
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCC
Q 004697 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (736)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~ 604 (736)
+++ | +.|..+|..|.+ ++|++.+++.++++++.|+.++|+.++ ++..+.++.+ .
T Consensus 266 ---~~~------~-~~k~~~k~~l~~----~~gl~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~--------- 319 (473)
T TIGR02095 266 ---ADD------L-AGKAENKEALQE----ELGLPVDDDVPLFGVISRLTQQKGVDL-LLAALPELLE--L--------- 319 (473)
T ss_pred ---ccc------h-hhhhhhHHHHHH----HcCCCccCCCCEEEEEecCccccChHH-HHHHHHHHHH--c---------
Confidence 223 5 577888888766 899988889999999999999999999 9888877643 2
Q ss_pred CCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcch
Q 004697 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 684 (736)
Q Consensus 605 ~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~ 684 (736)
++++++.|+++|.+.. .+.++++.. ++ +|+|+..|+.++++.++++||++++||+ +|+||++.
T Consensus 320 -~~~lvi~G~g~~~~~~------~l~~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~ 382 (473)
T TIGR02095 320 -GGQLVVLGTGDPELEE------ALRELAERY------PG--NVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQ 382 (473)
T ss_pred -CcEEEEECCCCHHHHH------HHHHHHHHC------CC--cEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHH
Confidence 4799999999865554 556666533 34 6999999999999999999999999999 99999999
Q ss_pred hhhhhcCceeEEeccccchhhhhhc----CCccEEEecc-ccch
Q 004697 685 MKFSLNGCLIIGTLDGANVEIRQEI----GEENFFLFGA-VAEQ 723 (736)
Q Consensus 685 MKa~lNGal~i~tlDGa~vEi~e~~----g~~n~f~FG~-~~~e 723 (736)
|.||.+|+++|+|-.|...|+.+.. ..+|||+|.. +.++
T Consensus 383 lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~ 426 (473)
T TIGR02095 383 LYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGA 426 (473)
T ss_pred HHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHH
Confidence 9999999999999999776655542 2379999975 3333
No 15
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1.3e-33 Score=315.97 Aligned_cols=411 Identities=18% Similarity=0.221 Sum_probs=292.8
Q ss_pred hccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcccccCCeeEEEEECCe
Q 004697 131 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 210 (736)
Q Consensus 131 E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~ 210 (736)
|..|-.-.||||...++.-++++.+|..+.=+.-+|.... +.|. ..++. .
T Consensus 8 E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~--------------~~~~-----~~~~~-----~------ 57 (476)
T cd03791 8 EVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRIL--------------DELR-----GQLLV-----L------ 57 (476)
T ss_pred cccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchh--------------hHhc-----cCeEE-----E------
Confidence 3344457999999999999999999999988888887542 0100 00000 0
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccCCC
Q 004697 211 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGD 290 (736)
Q Consensus 211 ~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D 290 (736)
..+.+++.+. ....++|...+. .+++|+++++.++. +..+|+.
T Consensus 58 -------------------~~~~~~~~~~----~~~~~~~~~~~~--gv~~~~l~~~~~~~-----------~~~~~~~- 100 (476)
T cd03791 58 -------------------RLFGVPVGGR----PEYVGVFELPVD--GVPVYFLDNPDYFD-----------RPGLYDD- 100 (476)
T ss_pred -------------------EEEeeccCCc----eeEEEEEEEEeC--CceEEEEcChHHcC-----------CCCCCCc-
Confidence 0001222222 556678877653 67888888877664 3333311
Q ss_pred CcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhc
Q 004697 291 STEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDIT 369 (736)
Q Consensus 291 ~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~ 369 (736)
...+-.-+..++.+|+.|+++.+ ..+ .+|++||+||||++++ +.+++..... .. ..
T Consensus 101 -~~~~~~~~~~~~~~f~~~~~~~l-------------~~~~~~pDviH~hd~~t~~~-~~~l~~~~~~------~~--~~ 157 (476)
T cd03791 101 -SGYDYEDNAERFALFSRAALELL-------------RRLGWKPDIIHCHDWHTGLV-PALLKEKYAD------PF--FK 157 (476)
T ss_pred -cCCCCccHHHHHHHHHHHHHHHH-------------HhcCCCCcEEEECchHHHHH-HHHHHHhhcc------cc--CC
Confidence 00111224558899999998752 222 5789999999999998 6666544321 11 25
Q ss_pred CceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhh
Q 004697 370 TRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVV 449 (736)
Q Consensus 370 ~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~ 449 (736)
+..+|||+|++.++|. |+...+..... .++....+...+. ...+||...++.
T Consensus 158 ~~~~v~tiH~~~~~g~--~~~~~~~~~~~-----------------------~~~~~~~~~~~~~---~~~~~~~~~~~~ 209 (476)
T cd03791 158 NIKTVFTIHNLAYQGV--FPLEALEDLGL-----------------------PWEELFHIDGLEF---YGQVNFLKAGIV 209 (476)
T ss_pred CCCEEEEeCCCCCCCC--CCHHHHHHcCC-----------------------Cccchhhhccccc---CCcccHHHHHHH
Confidence 7789999999999997 87776653211 0100001111111 237899999999
Q ss_pred ccchhHhHHHHhHHHHHhhhhc-CccccC---cCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhh
Q 004697 450 SAHTVNGVAQLHSDILKADLFA-DYVSLW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 525 (736)
Q Consensus 450 ~S~~vNgVS~lH~~vlk~~~f~-~~~~l~---p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~ 525 (736)
.|+.|++||+.|.+.+++..++ ++..++ +.++..|+|||+...| +|..++.+...+.
T Consensus 210 ~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~----~p~~~~~~~~~~~--------------- 270 (476)
T cd03791 210 YADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVW----NPATDPHLPANYS--------------- 270 (476)
T ss_pred hcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCccc----CccccchhhhcCC---------------
Confidence 9999999999999998865443 333333 5789999999999999 6877666554443
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCC
Q 004697 526 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 605 (736)
Q Consensus 526 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~ 605 (736)
.++ + +.|..+|..|.+ ++|++.+++.++++++.|+.++|+.++ ++.++.++.+ .
T Consensus 271 --~~~------~-~~~~~~k~~l~~----~~g~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~---------- 324 (476)
T cd03791 271 --ADD------L-EGKAENKAALQE----ELGLPVDPDAPLFGFVGRLTEQKGIDL-LLEALPELLE--L---------- 324 (476)
T ss_pred --ccc------c-ccHHHHHHHHHH----HcCCCcCCCCCEEEEEeeccccccHHH-HHHHHHHHHH--c----------
Confidence 111 4 588889988877 999988899999999999999999999 9888877643 2
Q ss_pred CeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchh
Q 004697 606 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 685 (736)
Q Consensus 606 P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~M 685 (736)
+++|++.|++.+.+.. .+.++++.. .+ +|+|+.+|+.++++.++++||++++||+ +|+||++.|
T Consensus 325 ~~~lvi~G~g~~~~~~------~~~~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~l 388 (476)
T cd03791 325 GGQLVILGSGDPEYEE------ALRELAARY------PG--RVAVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQM 388 (476)
T ss_pred CcEEEEEecCCHHHHH------HHHHHHHhC------CC--cEEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHHH
Confidence 4799999999664433 566666533 34 7999999999999999999999999999 999999999
Q ss_pred hhhhcCceeEEeccccchhhhhhc----CCccEEEeccc
Q 004697 686 KFSLNGCLIIGTLDGANVEIRQEI----GEENFFLFGAV 720 (736)
Q Consensus 686 Ka~lNGal~i~tlDGa~vEi~e~~----g~~n~f~FG~~ 720 (736)
.||.+|+++|+|..|...|+..+. +.+|||+|...
T Consensus 389 EAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 389 YAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred HHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 999999999999999776655442 22399999864
No 16
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=8.3e-33 Score=311.00 Aligned_cols=390 Identities=19% Similarity=0.222 Sum_probs=281.6
Q ss_pred ccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEE
Q 004697 134 AALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV 213 (736)
Q Consensus 134 ~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~ 213 (736)
|-.-.||||.-.+..-++++.+|.-+.-+.=+|..- .+. . ++ ..
T Consensus 12 P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~------~~~----~---------~~-~~---------------- 55 (466)
T PRK00654 12 PLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAI------REK----L---------RD-AQ---------------- 55 (466)
T ss_pred cCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcch------hhh----h---------cC-ce----------------
Confidence 445689999999999999999998887777665421 000 0 00 00
Q ss_pred cCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccC-CCCc
Q 004697 214 NPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYP-GDST 292 (736)
Q Consensus 214 ~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~-~D~~ 292 (736)
.+..+ + ..++|......+++++|+++++.|+. +..+|+ .|+.
T Consensus 56 ------------~~~~~--~------------~~~~~~~~~~~~gv~v~~v~~~~~~~-----------~~~~y~~~d~~ 98 (466)
T PRK00654 56 ------------VVGRL--D------------LFTVLFGHLEGDGVPVYLIDAPHLFD-----------RPSGYGYPDNG 98 (466)
T ss_pred ------------EEEEe--e------------eEEEEEEeEEcCCceEEEEeCHHHcC-----------CCCCCCCcChH
Confidence 00000 0 13455543223357788888877776 557887 4665
Q ss_pred chhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCc
Q 004697 293 EEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTR 371 (736)
Q Consensus 293 ~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~ 371 (736)
+ ++.||+.|+++.+ +.+ .+|++||+||||++++ +.+++..+ .. . ..+.
T Consensus 99 ~--------r~~~f~~~~~~~~-------------~~~~~~pDiiH~h~w~~~~~-~~~l~~~~-~~------~--~~~~ 147 (466)
T PRK00654 99 E--------RFAFFSWAAAEFA-------------EGLDPRPDIVHAHDWHTGLI-PALLKEKY-WR------G--YPDI 147 (466)
T ss_pred H--------HHHHHHHHHHHHH-------------HhcCCCCceEEECCcHHHHH-HHHHHHhh-hc------c--CCCC
Confidence 5 7779999998752 223 4899999999999998 66665432 11 1 1357
Q ss_pred eEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhc
Q 004697 372 TVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVS 450 (736)
Q Consensus 372 ~~vfT~HT~~peg~E~~p~~l~~~~-lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~ 450 (736)
.+|||+|++.++|. |+.+.+..+ +| ++.+ .....+. .+.+|+...++..
T Consensus 148 ~~v~TiH~~~~~g~--~~~~~~~~~~~~------------------------~~~~-~~~~~~~---~~~~~~~~~~~~~ 197 (466)
T PRK00654 148 KTVFTIHNLAYQGL--FPAEILGELGLP------------------------AEAF-HLEGLEF---YGQISFLKAGLYY 197 (466)
T ss_pred CEEEEcCCCcCCCc--CCHHHHHHcCCC------------------------hHHc-Cchhhhc---CCcccHHHHHHHh
Confidence 89999999999997 877766532 22 1111 1111111 1368999999999
Q ss_pred cchhHhHHHHhHHHHHhhhhc-Ccc---ccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhc
Q 004697 451 AHTVNGVAQLHSDILKADLFA-DYV---SLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (736)
Q Consensus 451 S~~vNgVS~lH~~vlk~~~f~-~~~---~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~ 526 (736)
|+.|++||+.+.+.+++..++ ++. ..-++|+..|.|||+...| ||..++.+...++
T Consensus 198 ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~----~p~~~~~~~~~~~---------------- 257 (466)
T PRK00654 198 ADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIW----NPETDPLLAANYS---------------- 257 (466)
T ss_pred cCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCcccc----CCccCcccccccC----------------
Confidence 999999999999998866554 333 2336789999999999999 7887766666655
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCC
Q 004697 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (736)
Q Consensus 527 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P 606 (736)
.++ + +.|..+|+.|.+ ++|++ +++.++++++.|+.++|+.++ ++..+.++.+ . +
T Consensus 258 -~~~------~-~~k~~~k~~l~~----~~gl~-~~~~~~i~~vGRl~~~KG~~~-li~a~~~l~~--~----------~ 311 (466)
T PRK00654 258 -ADD------L-EGKAENKRALQE----RFGLP-DDDAPLFAMVSRLTEQKGLDL-VLEALPELLE--Q----------G 311 (466)
T ss_pred -hhh------h-hchHHHHHHHHH----HhCCC-CCCCcEEEEeeccccccChHH-HHHHHHHHHh--c----------C
Confidence 222 5 578888888776 88986 557899999999999999999 8888877643 1 5
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhh
Q 004697 607 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (736)
Q Consensus 607 ~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MK 686 (736)
+++++.|.+.+.+.. .+.++++.+ ++ +|+|+.+|+.++++.++++||++++||+ +|+||++.|.
T Consensus 312 ~~lvivG~g~~~~~~------~l~~l~~~~------~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lE 375 (466)
T PRK00654 312 GQLVLLGTGDPELEE------AFRALAARY------PG--KVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLY 375 (466)
T ss_pred CEEEEEecCcHHHHH------HHHHHHHHC------CC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHH
Confidence 789999988765443 566666544 34 6888889999999999999999999999 9999999999
Q ss_pred hhhcCceeEEeccccchhhhhh----cCCccEEEecc
Q 004697 687 FSLNGCLIIGTLDGANVEIRQE----IGEENFFLFGA 719 (736)
Q Consensus 687 a~lNGal~i~tlDGa~vEi~e~----~g~~n~f~FG~ 719 (736)
||.+|+++|+|..|...|+... .+.+|||+|..
T Consensus 376 Ama~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~ 412 (466)
T PRK00654 376 ALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDD 412 (466)
T ss_pred HHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCC
Confidence 9999999999998866554432 23379999975
No 17
>PLN02316 synthase/transferase
Probab=99.97 E-value=1.3e-29 Score=303.27 Aligned_cols=367 Identities=18% Similarity=0.237 Sum_probs=262.2
Q ss_pred CCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCC
Q 004697 138 NGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNG 217 (736)
Q Consensus 138 nGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g 217 (736)
.||||.-.+..-++++.+|.-+.=+.-.|.. +....+.+ + .
T Consensus 603 vGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~-i~~~~~~~------------------~-----~--------------- 643 (1036)
T PLN02316 603 VGGLGDVVTSLSRAVQDLNHNVDIILPKYDC-LNLSHVKD------------------L-----H--------------- 643 (1036)
T ss_pred cCcHHHHHHHHHHHHHHcCCEEEEEecCCcc-cchhhccc------------------c-----e---------------
Confidence 7999999999999999999877777766652 10000000 0 0
Q ss_pred ceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcc-hhhHHHhhhhhhhcccccccC-CCCcchh
Q 004697 218 TRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG-QYESAAQLHSRAQQICAVLYP-GDSTEEG 295 (736)
Q Consensus 218 ~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~-~y~~a~~~~~~~~~It~~LY~-~D~~~~G 295 (736)
.+ ..|. ..| ..+++|...++ .+++|+++.. .++. +..+|+ .|+.+
T Consensus 644 --------~~--~~~~--~~~------~~~~v~~~~~~--GV~vyfl~~~~~~F~-----------r~~~Yg~~Dd~~-- 690 (1036)
T PLN02316 644 --------YQ--RSYS--WGG------TEIKVWFGKVE--GLSVYFLEPQNGMFW-----------AGCVYGCRNDGE-- 690 (1036)
T ss_pred --------EE--EEec--cCC------EEEEEEEEEEC--CcEEEEEeccccccC-----------CCCCCCchhHHH--
Confidence 00 0111 111 13456666543 5677777654 3554 445776 46666
Q ss_pred hhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEE
Q 004697 296 KLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAY 375 (736)
Q Consensus 296 k~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vf 375 (736)
++.|||.|+++.+. + .+ +.|++|||||||+|++ +-+++..+...+ . .+..+||
T Consensus 691 ------RF~~F~~Aale~l~-~---~~--------~~PDIIHaHDW~talv-a~llk~~~~~~~------~--~~~p~V~ 743 (1036)
T PLN02316 691 ------RFGFFCHAALEFLL-Q---SG--------FHPDIIHCHDWSSAPV-AWLFKDHYAHYG------L--SKARVVF 743 (1036)
T ss_pred ------HHHHHHHHHHHHHH-h---cC--------CCCCEEEECCChHHHH-HHHHHHhhhhhc------c--CCCCEEE
Confidence 89999999998632 1 11 5789999999999998 667766543221 1 4568999
Q ss_pred eecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhH
Q 004697 376 TNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVN 455 (736)
Q Consensus 376 T~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vN 455 (736)
|+|++..++ |+...++..|+.|+
T Consensus 744 TiHnl~~~~---------------------------------------------------------n~lk~~l~~AD~Vi 766 (1036)
T PLN02316 744 TIHNLEFGA---------------------------------------------------------NHIGKAMAYADKAT 766 (1036)
T ss_pred EeCCcccch---------------------------------------------------------hHHHHHHHHCCEEE
Confidence 999865321 11123567899999
Q ss_pred hHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHH
Q 004697 456 GVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQA 535 (736)
Q Consensus 456 gVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~ 535 (736)
+||+.+++.+.+. ..+ ...++|+..|.|||++.+| ||..+..++..++ ++|
T Consensus 767 TVS~tya~EI~~~--~~l-~~~~~Kl~vI~NGID~~~w----~P~tD~~lp~~y~-----------------~~~----- 817 (1036)
T PLN02316 767 TVSPTYSREVSGN--SAI-APHLYKFHGILNGIDPDIW----DPYNDNFIPVPYT-----------------SEN----- 817 (1036)
T ss_pred eCCHHHHHHHHhc--cCc-ccccCCEEEEECCcccccc----CCcccccccccCC-----------------chh-----
Confidence 9999999888753 001 1124789999999999999 8998888877665 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecC
Q 004697 536 EWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA 615 (736)
Q Consensus 536 ~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA 615 (736)
+.+.|..+|..|.+ ++|++ +++.+++++|.||+++|+.++ |+..+.++.+ . +.|||++|.+
T Consensus 818 -~~~gK~~~k~~Lr~----~lGL~-~~d~plVg~VGRL~~qKGvdl-Li~Al~~ll~--~----------~~qlVIvG~G 878 (1036)
T PLN02316 818 -VVEGKRAAKEALQQ----RLGLK-QADLPLVGIITRLTHQKGIHL-IKHAIWRTLE--R----------NGQVVLLGSA 878 (1036)
T ss_pred -hhhhhhhhHHHHHH----HhCCC-cccCeEEEEEeccccccCHHH-HHHHHHHHhh--c----------CcEEEEEeCC
Confidence 33678899999877 89987 468899999999999999999 9988877643 2 5789999987
Q ss_pred -CCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCcee
Q 004697 616 -FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLI 694 (736)
Q Consensus 616 -~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~ 694 (736)
.|.+.. .+.++++.+.. ..++ +|.|...|+..+++.+++|||++++||+ +|+||.++|.||.+|+++
T Consensus 879 pd~~~e~------~l~~La~~Lg~--~~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~Gtpp 946 (1036)
T PLN02316 879 PDPRIQN------DFVNLANQLHS--SHHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYGSIP 946 (1036)
T ss_pred CCHHHHH------HHHHHHHHhCc--cCCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcCCCe
Confidence 333332 45555543310 1246 8999889999999999999999999999 999999999999999999
Q ss_pred EEeccccchhhhhhc----------C-CccEEEeccc
Q 004697 695 IGTLDGANVEIRQEI----------G-EENFFLFGAV 720 (736)
Q Consensus 695 i~tlDGa~vEi~e~~----------g-~~n~f~FG~~ 720 (736)
|+|..|-..|..... | .+|||+|...
T Consensus 947 Vvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 947 VVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred EEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 999999766655442 1 3699999763
No 18
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.80 E-value=1.4e-20 Score=196.00 Aligned_cols=221 Identities=16% Similarity=0.199 Sum_probs=143.4
Q ss_pred CCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEEcC
Q 004697 136 LGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNP 215 (736)
Q Consensus 136 lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~ 215 (736)
.-.||||..++..-++++.+|..+.-+--+|.. +.... .|.+ ...++. ...
T Consensus 13 ~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~-~~~~~----~~~~--------------------~~~~~~----~~~ 63 (245)
T PF08323_consen 13 AKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGF-IDEEY----FQLE--------------------PVRRLS----VPF 63 (245)
T ss_dssp B-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THH-HHHHC----TTEE--------------------EEEEES-----ST
T ss_pred cccCcHhHHHHHHHHHHHhcCCeEEEEEccchh-hhhhh----hcce--------------------EEEEec----ccc
Confidence 668999999999999999999999888877732 21111 0000 000100 000
Q ss_pred CCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccCC------
Q 004697 216 NGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG------ 289 (736)
Q Consensus 216 ~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~------ 289 (736)
.+ . ++.++ . ..+++|+.... .+++|+++++.|++ +..+|++
T Consensus 64 ~~--------~---v~~~~-~--------~~~~v~~~~~~--~v~v~~i~~~~~f~-----------r~~iY~~~~~~~~ 110 (245)
T PF08323_consen 64 GG--------P---VPVGV-W--------YEVRVYRYPVD--GVPVYFIDNPEYFD-----------RPGIYGDNGGDYP 110 (245)
T ss_dssp TC--------E---EEEE-------------EEEEEEEET--TEEEEEEESHHHHG-----------SSSSSBSTSSBHT
T ss_pred cc--------c---ccccc-c--------eEEEEEEEEcC--CccEEEecChhhcc-----------ccceeccCCCcch
Confidence 00 0 12221 0 34678888754 79999999999886 7779974
Q ss_pred CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhh
Q 004697 290 DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDI 368 (736)
Q Consensus 290 D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i 368 (736)
|+.+ ++.||+.|+++. ++.+ ++|++|||||||+|++ |-++|.... .+..+
T Consensus 111 d~~~--------rf~~fs~a~le~-------------~~~l~~~pDIIH~hDW~tal~-p~~lk~~~~-----~~~~~-- 161 (245)
T PF08323_consen 111 DNAE--------RFAFFSRAALEL-------------LKKLGWKPDIIHCHDWHTALA-PLYLKERYQ-----QDPFF-- 161 (245)
T ss_dssp THHH--------HHHHHHHHHHHH-------------HCTCT-S-SEEEEECGGGTTH-HHHHHHCCS-----S------
T ss_pred hHHH--------HHHHHHHHHHHH-------------HHhhCCCCCEEEecCchHHHH-HHHhccccc-----ccccc--
Confidence 5555 888999999875 4555 6899999999999999 888887643 33444
Q ss_pred cCceEEEeecCCchhhhhhccHHHHHh-hchhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchh
Q 004697 369 TTRTVAYTNHTVLPEALEKWSQAVMWK-LLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLC 447 (736)
Q Consensus 369 ~~~~~vfT~HT~~peg~E~~p~~l~~~-~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~la 447 (736)
.+..++||+||+.++|. ||.+.+.. .|| ++.+..++..+. ++.+||.+.|
T Consensus 162 ~~~~~v~TIHN~~yqg~--~~~~~~~~~gl~------------------------~~~~~~~~~~~~---~~~in~lk~g 212 (245)
T PF08323_consen 162 ANIPTVFTIHNLEYQGI--FPPEDLKALGLP------------------------DEYFQNLDEYEF---YGQINFLKAG 212 (245)
T ss_dssp --SEEEEEESSTT---E--EEGGGGGCTT-G------------------------GGGS-STTTTEE---TTEEEHHHHH
T ss_pred ccceeEEEEcccccCCc--CCHHHHHHcCCC------------------------HHHhcccccccc---ccccCHHHHH
Confidence 57899999999999998 88665531 133 332223333333 3589999999
Q ss_pred hhccchhHhHHHHhHHHHHhhhhc-Ccccc
Q 004697 448 VVSAHTVNGVAQLHSDILKADLFA-DYVSL 476 (736)
Q Consensus 448 i~~S~~vNgVS~lH~~vlk~~~f~-~~~~l 476 (736)
|..|++||+||+.|++++++..|+ ++.++
T Consensus 213 i~~AD~v~TVS~~Ya~Ei~~~~~g~GL~~~ 242 (245)
T PF08323_consen 213 IVYADKVTTVSPTYAREIQTPEFGEGLEGL 242 (245)
T ss_dssp HHHSSEEEESSHHHHHHTTSHHHHTT-HHH
T ss_pred HHhcCEeeeCCHHHHHHHhCcccCCChHHH
Confidence 999999999999999999988876 66544
No 19
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.37 E-value=1.3e-11 Score=141.44 Aligned_cols=228 Identities=18% Similarity=0.212 Sum_probs=156.0
Q ss_pred cccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCch
Q 004697 440 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (736)
Q Consensus 440 ~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~ 519 (736)
...|=..+...|+.+.+||+.-+++++ . +++.-|++ =|-|||++..|- .
T Consensus 216 r~~iE~~aa~~Ad~fttVS~it~~E~~-~----Ll~~~pd~--ViPNGid~~~f~-----~------------------- 264 (590)
T cd03793 216 RYCIERAAAHCAHVFTTVSEITAYEAE-H----LLKRKPDV--VLPNGLNVKKFS-----A------------------- 264 (590)
T ss_pred HHHHHHHHHhhCCEEEECChHHHHHHH-H----HhCCCCCE--EeCCCcchhhcc-----c-------------------
Confidence 345666899999999999999888887 3 33455666 456999999882 1
Q ss_pred hHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CcCCCCceeeee-cccccc-chhccchhhHHHHHHHHHHh
Q 004697 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-G-VTIDPNSLFDIQ-VKRIHE-YKRQLLNILGAIYRYKKLKE 595 (736)
Q Consensus 520 ~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~-g-~~ldp~~l~d~~-vkR~~e-YKRq~Lnil~~i~r~~~i~~ 595 (736)
..+ ++..|...|+++.++++..+ | ..+||+..+..| +.|+.- .|+.++ ++..+.|+.+...
T Consensus 265 --------~~e------~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~ 329 (590)
T cd03793 265 --------LHE------FQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLK 329 (590)
T ss_pred --------chh------hhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHH
Confidence 111 45688999999999875432 2 247788888777 799987 899999 9999999986444
Q ss_pred cCcccccCCCCeE-EEEEecCC-------CCCHHHHHHHHHHHHHHHHhcCC----------------------------
Q 004697 596 MSPQERKKTTPRT-IMIGGKAF-------ATYTNAKRIVKLVNDVGEVVNTD---------------------------- 639 (736)
Q Consensus 596 ~~~~~~~~~~P~q-~If~GKA~-------P~y~~aK~iIk~I~~la~~in~d---------------------------- 639 (736)
.... +.+=+. +||-+|.. -+...-|++-.-+.++.+++...
T Consensus 330 ~~~~---~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~ 406 (590)
T cd03793 330 VEGS---DTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRR 406 (590)
T ss_pred hcCC---CCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHH
Confidence 1111 122122 34555533 23344444544455544433322
Q ss_pred ----------c----------------------CC---CCcceEEEEcCC--------ChhHHhhhcccccccccCCCCC
Q 004697 640 ----------P----------------------EV---NSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAG 676 (736)
Q Consensus 640 ----------p----------------------~~---~~~lkVvFlenY--------~vslA~~iv~gaDv~l~~s~~~ 676 (736)
| .+ .++.||+|.|.| +++. ..++.|||++..||.
T Consensus 407 ~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y-~E~~~g~dl~v~PS~-- 483 (590)
T cd03793 407 IFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDY-EEFVRGCHLGVFPSY-- 483 (590)
T ss_pred HHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcch-HHHhhhceEEEeccc--
Confidence 1 12 467999999988 5533 456899999999999
Q ss_pred ccCCCcchhhhhhcCceeEEeccc----cchhhhhhcCCccEEEecc
Q 004697 677 MEASGTSNMKFSLNGCLIIGTLDG----ANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 677 ~EASGTs~MKa~lNGal~i~tlDG----a~vEi~e~~g~~n~f~FG~ 719 (736)
+|+.|.--+-||.-|++.|+|-.+ |..|+....+...+|+...
T Consensus 484 yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r 530 (590)
T cd03793 484 YEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDR 530 (590)
T ss_pred cCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecC
Confidence 899999999999999999999775 4444433222346777743
No 20
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.12 E-value=7.9e-10 Score=131.51 Aligned_cols=144 Identities=16% Similarity=0.166 Sum_probs=106.6
Q ss_pred HhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEE-EecCC---CCCHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMI-GGKAF---ATYTNAKRIVKLVN 630 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If-~GKA~---P~y~~aK~iIk~I~ 630 (736)
.+|...+|+.++++++.|+.+.|+.+. ++..+.+..++.. ..++|+ ||... ..+...+..++.+.
T Consensus 541 ~~G~l~d~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~~----------~~~LVIVGGg~~~~~s~d~ee~~~i~~L~ 609 (784)
T TIGR02470 541 HYGYLKDPNKPIIFSMARLDRVKNLTG-LVECYGRSPKLRE----------LVNLVVVAGKLDAKESKDREEQAEIEKMH 609 (784)
T ss_pred HhCCCCCCCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhCC----------CeEEEEEeCCcccccccchhHHHHHHHHH
Confidence 678777899999999999999999998 8777766544321 345555 44433 23445556777777
Q ss_pred HHHHHhcCCcCCCCcceEEEEcCC-----ChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhh
Q 004697 631 DVGEVVNTDPEVNSYLKVVFVPNY-----NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (736)
Q Consensus 631 ~la~~in~dp~~~~~lkVvFlenY-----~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi 705 (736)
++++.+ .+.+ +|.|+--- .-++.+.+-.++||+.+||+ +|++|..-+-||..|.++|+|..|-..|+
T Consensus 610 ~la~~~----gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~Ei 681 (784)
T TIGR02470 610 NLIDQY----QLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLEI 681 (784)
T ss_pred HHHHHh----CCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 777655 3567 77775421 12344444457899999999 99999999999999999999999988887
Q ss_pred hhhcCCccEEEecc
Q 004697 706 RQEIGEENFFLFGA 719 (736)
Q Consensus 706 ~e~~g~~n~f~FG~ 719 (736)
..+ ..|||+|..
T Consensus 682 V~d--g~tGfLVdp 693 (784)
T TIGR02470 682 IQD--GVSGFHIDP 693 (784)
T ss_pred hcC--CCcEEEeCC
Confidence 764 479999975
No 21
>PLN00142 sucrose synthase
Probab=99.07 E-value=1.6e-09 Score=129.02 Aligned_cols=144 Identities=14% Similarity=0.094 Sum_probs=107.1
Q ss_pred HhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecC-CCC---CHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FAT---YTNAKRIVKLVN 630 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA-~P~---y~~aK~iIk~I~ 630 (736)
..|..-+++.++++++.|+.++|+.+. ++..+.++.++.. ...+++.|.+ .|. +...++.++.+.
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~~----------~~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLRE----------LVNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhCC----------CcEEEEEECCccccccccHHHHHHHHHHH
Confidence 567656788899999999999999998 8888776654311 3567776654 432 333344455666
Q ss_pred HHHHHhcCCcCCCCcceEEEEcC---C--ChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhh
Q 004697 631 DVGEVVNTDPEVNSYLKVVFVPN---Y--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (736)
Q Consensus 631 ~la~~in~dp~~~~~lkVvFlen---Y--~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi 705 (736)
++++.+ .+.+ +|.|+.. + +-++.+.+..++|++.++|+ +|++|..-+-||..|.+.|+|-.|-..|+
T Consensus 633 ~La~~l----gL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EI 704 (815)
T PLN00142 633 SLIEKY----NLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEI 704 (815)
T ss_pred HHHHHc----CCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 666544 4567 7877642 2 24566666668899999999 99999999999999999999999988887
Q ss_pred hhhcCCccEEEecc
Q 004697 706 RQEIGEENFFLFGA 719 (736)
Q Consensus 706 ~e~~g~~n~f~FG~ 719 (736)
.++ ..|||++..
T Consensus 705 V~d--G~tG~LV~P 716 (815)
T PLN00142 705 IVD--GVSGFHIDP 716 (815)
T ss_pred hcC--CCcEEEeCC
Confidence 765 479999974
No 22
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.02 E-value=3.1e-09 Score=115.11 Aligned_cols=192 Identities=18% Similarity=0.206 Sum_probs=131.3
Q ss_pred chhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhh
Q 004697 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (736)
Q Consensus 445 ~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l 524 (736)
..++..++.+.+||+-..+.++.. |+ .+-+.++.-|-|||+...|- |.
T Consensus 139 ~~~~~~ad~vi~~S~~~~~~~~~~-~~---~~~~~~i~vi~ng~~~~~~~----~~------------------------ 186 (388)
T TIGR02149 139 KTAIEAADRVIAVSGGMREDILKY-YP---DLDPEKVHVIYNGIDTKEYK----PD------------------------ 186 (388)
T ss_pred HHHHhhCCEEEEccHHHHHHHHHH-cC---CCCcceEEEecCCCChhhcC----CC------------------------
Confidence 345667888888988766655422 22 22356788889999888772 21
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCC
Q 004697 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (736)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~ 604 (736)
+. .. .+.++|+ +++.+.++++.|+..+|+.++ ++..+.++. .
T Consensus 187 ----~~---------------~~----~~~~~~~--~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l~---~--------- 228 (388)
T TIGR02149 187 ----DG---------------NV----VLDRYGI--DRSRPYILFVGRITRQKGVPH-LLDAVHYIP---K--------- 228 (388)
T ss_pred ----ch---------------HH----HHHHhCC--CCCceEEEEEcccccccCHHH-HHHHHHHHh---h---------
Confidence 00 00 1124453 567888999999999999998 887776642 1
Q ss_pred CCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcc
Q 004697 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTS 683 (736)
Q Consensus 605 ~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlen-Y~vslA~~iv~gaDv~l~~s~~~~EASGTs 683 (736)
+.++++.|.+.........+.+.+..+... .+ +|+|+.. ++.+-...++.+||+.+.+|. .|+.|++
T Consensus 229 -~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~-------~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~~ 296 (388)
T TIGR02149 229 -DVQVVLCAGAPDTPEVAEEVRQAVALLDRN-------RT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGIV 296 (388)
T ss_pred -cCcEEEEeCCCCcHHHHHHHHHHHHHhccc-------cC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCChH
Confidence 346777665544333333444444433310 12 4777765 566667888999999999999 8999999
Q ss_pred hhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 684 NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 684 ~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
.+-+|..|.+.|+|-.|...|+.+. ..||++|...
T Consensus 297 ~lEA~a~G~PvI~s~~~~~~e~i~~--~~~G~~~~~~ 331 (388)
T TIGR02149 297 NLEAMACGTPVVASATGGIPEVVVD--GETGFLVPPD 331 (388)
T ss_pred HHHHHHcCCCEEEeCCCCHHHHhhC--CCceEEcCCC
Confidence 9999999999999998888776654 4689998653
No 23
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.88 E-value=2e-08 Score=112.72 Aligned_cols=139 Identities=17% Similarity=0.130 Sum_probs=96.6
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCH---HHHHHHHHHHHHHHHhc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT---NAKRIVKLVNDVGEVVN 637 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~---~aK~iIk~I~~la~~in 637 (736)
+|+..+++++.|+.+.|++++ ++..+.++.+++. .|..++++|.+..... ..++..+.+..+++.+
T Consensus 245 ~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~---------~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~- 313 (439)
T TIGR02472 245 DPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE---------MANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRY- 313 (439)
T ss_pred ccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh---------hccEEEEeCCccccccccHHHHHHHHHHHHHHHHc-
Confidence 467788999999999999999 9888876544332 1323346676533222 2233344444444433
Q ss_pred CCcCCCCcceEEEEcCCChhHHhhhcccc----cccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCcc
Q 004697 638 TDPEVNSYLKVVFVPNYNVSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEEN 713 (736)
Q Consensus 638 ~dp~~~~~lkVvFlenY~vslA~~iv~ga----Dv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n 713 (736)
.+.+ +|.|+....-+-...++++| |++..+|+ .|+.|..-+-||.-|.+.|+|..|...|+.++ .+|
T Consensus 314 ---~l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~~~ 384 (439)
T TIGR02472 314 ---DLYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--CRN 384 (439)
T ss_pred ---CCCc--eEEecCCCCHHHHHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--CCc
Confidence 3566 78887654433334555544 99999999 89999999999999999999999988877653 379
Q ss_pred EEEecc
Q 004697 714 FFLFGA 719 (736)
Q Consensus 714 ~f~FG~ 719 (736)
||+|..
T Consensus 385 G~lv~~ 390 (439)
T TIGR02472 385 GLLVDV 390 (439)
T ss_pred EEEeCC
Confidence 999954
No 24
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.82 E-value=2.1e-08 Score=121.98 Aligned_cols=138 Identities=14% Similarity=0.163 Sum_probs=95.6
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHH---HHHHHHHHHHHHHHhc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN---AKRIVKLVNDVGEVVN 637 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~---aK~iIk~I~~la~~in 637 (736)
+|+.+++.++.|+.+.|+.+. ++..+.++.++.. . ...++| +|.+...+.+ .....+.+..+++.+
T Consensus 476 ~pdkpvIL~VGRL~p~KGi~~-LIeAf~~L~~l~~-~-------~nL~LI-iG~gdd~d~l~~~~~~~l~~L~~li~~l- 544 (1050)
T TIGR02468 476 NPRKPMILALARPDPKKNITT-LVKAFGECRPLRE-L-------ANLTLI-MGNRDDIDEMSSGSSSVLTSVLKLIDKY- 544 (1050)
T ss_pred cCCCcEEEEEcCCccccCHHH-HHHHHHHhHhhcc-C-------CCEEEE-EecCchhhhhhccchHHHHHHHHHHHHh-
Confidence 588999999999999999999 9888887765322 1 134444 4543222221 122233344444433
Q ss_pred CCcCCCCcceEEEEcCC-ChhHHhhhcccc----cccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCc
Q 004697 638 TDPEVNSYLKVVFVPNY-NVSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (736)
Q Consensus 638 ~dp~~~~~lkVvFlenY-~vslA~~iv~ga----Dv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~ 712 (736)
.+.+ +|.|+--- .-.++ .++..| ||+.++|+ +|+-|..-+-||..|.+.|+|-.|...|+.+. ..
T Consensus 545 ---gL~g--~V~FlG~v~~edvp-~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~--g~ 614 (1050)
T TIGR02468 545 ---DLYG--QVAYPKHHKQSDVP-DIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRV--LD 614 (1050)
T ss_pred ---CCCC--eEEecCCCCHHHHH-HHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhcc--CC
Confidence 3566 77776432 23444 444444 79999999 99999999999999999999999998887765 37
Q ss_pred cEEEecc
Q 004697 713 NFFLFGA 719 (736)
Q Consensus 713 n~f~FG~ 719 (736)
|||+|..
T Consensus 615 nGlLVdP 621 (1050)
T TIGR02468 615 NGLLVDP 621 (1050)
T ss_pred cEEEECC
Confidence 9999964
No 25
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.80 E-value=9.3e-08 Score=104.90 Aligned_cols=196 Identities=15% Similarity=0.169 Sum_probs=130.9
Q ss_pred hhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhcc
Q 004697 448 VVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQF 527 (736)
Q Consensus 448 i~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~ 527 (736)
+..++.+-.+|+-..+.+... + ..-++++.-|.|||+...|- |.
T Consensus 161 ~~~~d~vi~~s~~~~~~~~~~-~----~~~~~ki~vi~ngvd~~~~~----~~--------------------------- 204 (405)
T TIGR03449 161 VDNADRLIANTDEEARDLVRH-Y----DADPDRIDVVAPGADLERFR----PG--------------------------- 204 (405)
T ss_pred HHhcCeEEECCHHHHHHHHHH-c----CCChhhEEEECCCcCHHHcC----CC---------------------------
Confidence 445677777777655554321 1 23356788899999987772 11
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCe
Q 004697 528 ADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPR 607 (736)
Q Consensus 528 ~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~ 607 (736)
+. - .. +++.|+ +++...++++.|+..+|+.++ ++..+.++.+ . .|+ ...
T Consensus 205 -~~------~-~~------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~-li~a~~~l~~--~-~~~-----~~~ 253 (405)
T TIGR03449 205 -DR------A-TE------------RARLGL--PLDTKVVAFVGRIQPLKAPDV-LLRAVAELLD--R-DPD-----RNL 253 (405)
T ss_pred -cH------H-HH------------HHhcCC--CCCCcEEEEecCCCcccCHHH-HHHHHHHHHh--h-CCC-----cce
Confidence 00 0 00 113453 466788999999999999999 8888887754 3 221 147
Q ss_pred EEEEEecCCC-CCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhh
Q 004697 608 TIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (736)
Q Consensus 608 q~If~GKA~P-~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MK 686 (736)
++++.|.+.+ ++..-.++.+++... .+.+ +|.|+..-.-+-...++++||+...+|+ .|..|+.-+-
T Consensus 254 ~l~ivG~~~~~g~~~~~~l~~~~~~~--------~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~lE 321 (405)
T TIGR03449 254 RVIVVGGPSGSGLATPDALIELAAEL--------GIAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVAME 321 (405)
T ss_pred EEEEEeCCCCCcchHHHHHHHHHHHc--------CCCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHHHH
Confidence 8888886543 312222333333222 2344 6777765445555678999999999999 8999999999
Q ss_pred hhhcCceeEEeccccchhhhhhcCCccEEEecc-ccchh
Q 004697 687 FSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-VAEQV 724 (736)
Q Consensus 687 a~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~-~~~ev 724 (736)
+|..|.+.|+|-.|...|+.++ ..+||+|.. +.+++
T Consensus 322 Ama~G~Pvi~~~~~~~~e~i~~--~~~g~~~~~~d~~~l 358 (405)
T TIGR03449 322 AQACGTPVVAARVGGLPVAVAD--GETGLLVDGHDPADW 358 (405)
T ss_pred HHHcCCCEEEecCCCcHhhhcc--CCceEECCCCCHHHH
Confidence 9999999999999988776653 378999864 44443
No 26
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.72 E-value=2.4e-07 Score=105.34 Aligned_cols=187 Identities=16% Similarity=0.134 Sum_probs=132.3
Q ss_pred cccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhH
Q 004697 442 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 521 (736)
Q Consensus 442 nMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l 521 (736)
.+...++..|+.|..||+-..+..+.. ..-|+|+.-|.|||+..++- |.
T Consensus 236 ~l~~~~~~~ad~Ii~~s~~~~~~~~~~------g~~~~ki~vIpNgid~~~f~----~~--------------------- 284 (475)
T cd03813 236 SLGRLAYQAADRITTLYEGNRERQIED------GADPEKIRVIPNGIDPERFA----PA--------------------- 284 (475)
T ss_pred HHHHHHHHhCCEEEecCHHHHHHHHHc------CCCHHHeEEeCCCcCHHHcC----Cc---------------------
Confidence 345567778888888888766554321 23357788899999876662 10
Q ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccc
Q 004697 522 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 601 (736)
Q Consensus 522 ~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~ 601 (736)
.. . ..+++.+.++++.|+...|+.+. ++..+..+.+ . .
T Consensus 285 -------~~--------~-------------------~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~---- 322 (475)
T cd03813 285 -------RR--------A-------------------RPEKEPPVVGLIGRVVPIKDIKT-FIRAAAIVRK--K-I---- 322 (475)
T ss_pred -------cc--------c-------------------ccCCCCcEEEEEeccccccCHHH-HHHHHHHHHH--h-C----
Confidence 00 0 02356789999999999999999 8888777654 2 1
Q ss_pred cCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCC
Q 004697 602 KKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG 681 (736)
Q Consensus 602 ~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASG 681 (736)
.++++++.|.+.......+++-+++.++. +.+ +|.|+. ...+. .+++++|+...+|. .|+.|
T Consensus 323 ---p~~~l~IvG~g~~~~~~~~e~~~li~~l~--------l~~--~V~f~G--~~~v~-~~l~~aDv~vlpS~--~Eg~p 384 (475)
T cd03813 323 ---PDAEGWVIGPTDEDPEYAEECRELVESLG--------LED--NVKFTG--FQNVK-EYLPKLDVLVLTSI--SEGQP 384 (475)
T ss_pred ---CCeEEEEECCCCcChHHHHHHHHHHHHhC--------CCC--eEEEcC--CccHH-HHHHhCCEEEeCch--hhcCC
Confidence 25789999987543334444444443332 245 788877 34454 46689999999999 89999
Q ss_pred cchhhhhhcCceeEEeccccchhhhhhcC----CccEEEecc
Q 004697 682 TSNMKFSLNGCLIIGTLDGANVEIRQEIG----EENFFLFGA 719 (736)
Q Consensus 682 Ts~MKa~lNGal~i~tlDGa~vEi~e~~g----~~n~f~FG~ 719 (736)
+.-+-+|..|.+.|+|-.|...|+.++.+ +.+|++|..
T Consensus 385 ~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 385 LVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred hHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECC
Confidence 99999999999999999998888777632 248999864
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.65 E-value=5.1e-07 Score=98.03 Aligned_cols=147 Identities=17% Similarity=0.195 Sum_probs=110.2
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
.++.++++++.|+.+.|++++ ++..+.++.+ . .+ ...++++++.|.+.+.....-.....+.++++.. .
T Consensus 208 ~~~~~~i~~~grl~~~Kg~~~-ll~a~~~l~~--~-~~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~---~ 276 (392)
T cd03805 208 KSGKKTFLSINRFERKKNIAL-AIEAFAILKD--K-LA----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEEL---L 276 (392)
T ss_pred CCCceEEEEEeeecccCChHH-HHHHHHHHHh--h-cc----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHh---c
Confidence 367789999999999999999 9998888754 2 10 0025789999988776444333344555555430 2
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
.+.+ +|.|+....-.....++.+||+.+.+|. .|..|++-+-+|..|.+.|+|..|...|+... ..+||++..+
T Consensus 277 ~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~--~~~g~~~~~~ 350 (392)
T cd03805 277 LLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVD--GETGFLCEPT 350 (392)
T ss_pred CCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhcc--CCceEEeCCC
Confidence 3345 8999988777777788999999999998 89999999999999999999988877766543 3689988766
Q ss_pred cchh
Q 004697 721 AEQV 724 (736)
Q Consensus 721 ~~ev 724 (736)
.+++
T Consensus 351 ~~~~ 354 (392)
T cd03805 351 PEEF 354 (392)
T ss_pred HHHH
Confidence 5544
No 28
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.61 E-value=4.3e-07 Score=100.23 Aligned_cols=133 Identities=16% Similarity=0.149 Sum_probs=97.1
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
+++...++++.|+...|++++ ++..+..+.+ . + .+.+++++|.+. .... +-+++...
T Consensus 190 ~~~~~~i~~~grl~~~Kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~-~~~~---l~~~~~~~-------- 246 (398)
T cd03796 190 DNDKITIVVISRLVYRKGIDL-LVGIIPEICK--K-H-------PNVRFIIGGDGP-KRIL---LEEMREKY-------- 246 (398)
T ss_pred CCCceEEEEEeccchhcCHHH-HHHHHHHHHh--h-C-------CCEEEEEEeCCc-hHHH---HHHHHHHh--------
Confidence 356788999999999999999 8888776543 2 2 257999999763 2222 22222221
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
.+.+ +|.|+...+-+-...++++||+.+.+|. .|+.|.+-+-||..|.+.|+|..|..-|+.++ +++++...+
T Consensus 247 ~l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~---~~~~~~~~~ 319 (398)
T cd03796 247 NLQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPP---DMILLAEPD 319 (398)
T ss_pred CCCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhheeC---CceeecCCC
Confidence 2355 7888866666677778899999999998 89999999999999999999999988776653 334444444
Q ss_pred cch
Q 004697 721 AEQ 723 (736)
Q Consensus 721 ~~e 723 (736)
.++
T Consensus 320 ~~~ 322 (398)
T cd03796 320 VES 322 (398)
T ss_pred HHH
Confidence 444
No 29
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.58 E-value=9.8e-07 Score=93.69 Aligned_cols=137 Identities=19% Similarity=0.201 Sum_probs=101.2
Q ss_pred HHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 004697 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVG 633 (736)
Q Consensus 554 ~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la 633 (736)
++.+ .+++...++++.|+...|+++. ++..+..+.+. + .+.++++.|.+.+.....+.+.+.+.+..
T Consensus 177 ~~~~--~~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~l~~~---~-------~~~~l~ivG~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd03819 177 REWP--LPKGKPVILLPGRLTRWKGQEV-FIEALARLKKD---D-------PDVHLLIVGDAQGRRFYYAELLELIKRLG 243 (355)
T ss_pred HHcC--CCCCceEEEEeeccccccCHHH-HHHHHHHHHhc---C-------CCeEEEEEECCcccchHHHHHHHHHHHcC
Confidence 3444 3467788999999999999999 88877776441 1 26899999998776555455555444332
Q ss_pred HHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCC-CCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCc
Q 004697 634 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS-TAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (736)
Q Consensus 634 ~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s-~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~ 712 (736)
+.+ +|.|+.. .-.++ .++.+||+.+.+| . .|..|++-+-||..|.+.|+|-.|...|+..+. .
T Consensus 244 --------~~~--~v~~~g~-~~~~~-~~l~~ad~~i~ps~~--~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~--~ 307 (355)
T cd03819 244 --------LQD--RVTFVGH-CSDMP-AAYALADIVVSASTE--PEAFGRTAVEAQAMGRPVIASDHGGARETVRPG--E 307 (355)
T ss_pred --------Ccc--eEEEcCC-cccHH-HHHHhCCEEEecCCC--CCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCC--C
Confidence 233 5666655 33444 5678899999999 5 799999999999999999999888888776652 4
Q ss_pred cEEEecc
Q 004697 713 NFFLFGA 719 (736)
Q Consensus 713 n~f~FG~ 719 (736)
+|+++..
T Consensus 308 ~g~~~~~ 314 (355)
T cd03819 308 TGLLVPP 314 (355)
T ss_pred ceEEeCC
Confidence 8999853
No 30
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=98.54 E-value=7.1e-07 Score=101.53 Aligned_cols=143 Identities=13% Similarity=0.043 Sum_probs=96.8
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCCc
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y-~~aK~iIk~I~~la~~in~dp 640 (736)
++..+++++.|+...|+..+ ++..+.++.+ . .|..+ ..+++++.|.+.-++ ..-.++.+.+.+++..+|..-
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPE-RLLAFERLLE--R-YPEWR---GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHHHH--h-Chhhc---CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhcc
Confidence 56788999999999999999 9888888754 3 34321 136676666544232 233456667777777665311
Q ss_pred CCCCcceEEEEcCC-ChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCce-----eEEeccccchhhhhhcCCccE
Q 004697 641 EVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL-----IIGTLDGANVEIRQEIGEENF 714 (736)
Q Consensus 641 ~~~~~lkVvFlenY-~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal-----~i~tlDGa~vEi~e~~g~~n~ 714 (736)
...+.-.|+|+..+ +-+--..++++||+.+.+|+ .|+-|+.-+-||.-|.+ .+|+..|+-.+ ..+|
T Consensus 335 g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~--~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~------~~~g 406 (460)
T cd03788 335 GTLDWTPVRYLYRSLPREELAALYRAADVALVTPL--RDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE------LSGA 406 (460)
T ss_pred CCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCcc--ccccCcccceeEEEecCCCceEEEeccccchhh------cCCC
Confidence 11111247777653 55566678899999999999 89999999999999885 55555565432 2578
Q ss_pred EEecc
Q 004697 715 FLFGA 719 (736)
Q Consensus 715 f~FG~ 719 (736)
+++..
T Consensus 407 ~lv~p 411 (460)
T cd03788 407 LLVNP 411 (460)
T ss_pred EEECC
Confidence 88863
No 31
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.45 E-value=2.8e-06 Score=91.10 Aligned_cols=128 Identities=17% Similarity=0.207 Sum_probs=93.4
Q ss_pred CCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 560 ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (736)
+.++..+.+++.|+..+|+.+. ++..+.++.+ . .|.++++.|.+. .. +.+. +.++..
T Consensus 193 ~~~~~~~il~~g~l~~~K~~~~-li~a~~~l~~--~---------~~~~l~i~G~g~-~~---~~~~----~~~~~~--- 249 (371)
T cd04962 193 APEGEKVLIHISNFRPVKRIDD-VIRIFAKVRK--E---------VPARLLLVGDGP-ER---SPAE----RLAREL--- 249 (371)
T ss_pred CCCCCeEEEEecccccccCHHH-HHHHHHHHHh--c---------CCceEEEEcCCc-CH---HHHH----HHHHHc---
Confidence 3467788999999999999998 8877766532 1 267899999763 22 2222 222222
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
.+.+ +|.|+.. .-.+ ..++.+||+..++|+ .|+.|.+-+-+|..|.+.|+|-.|..-|+.++ ..+||+|..
T Consensus 250 -~~~~--~v~~~g~-~~~~-~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~--~~~G~~~~~ 320 (371)
T cd04962 250 -GLQD--DVLFLGK-QDHV-EELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKH--GETGFLVDV 320 (371)
T ss_pred -CCCc--eEEEecC-cccH-HHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcC--CCceEEcCC
Confidence 2345 6777763 3344 566899999999998 99999999999999999999988877665554 368999864
No 32
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.40 E-value=4.2e-06 Score=88.98 Aligned_cols=133 Identities=14% Similarity=0.042 Sum_probs=94.1
Q ss_pred CCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 560 ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (736)
..++.+.++++.|+..+|+.++ ++..+..+.+ . . .++++++.|.+... . .+...++..
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~-li~a~~~l~~--~-~-------~~~~l~ivG~g~~~-~-------~~~~~~~~~--- 245 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEF-LIEIFAELLK--K-N-------PNAKLLLVGDGELE-E-------EIKKKVKEL--- 245 (358)
T ss_pred CCCCCEEEEEEeccccccChHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCchH-H-------HHHHHHHhc---
Confidence 3467899999999999999999 8888887754 2 1 25799999976532 1 222223222
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEec-
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG- 718 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG- 718 (736)
...+ +|.|+.- .-. ...++..||+..++|+ .|.+|..-+-||..|.+.|+|-.|..-|+.++ +.+|+.-
T Consensus 246 -~~~~--~v~~~g~-~~~-~~~~~~~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~---~~~~~~~~ 315 (358)
T cd03812 246 -GLED--KVIFLGV-RND-VPELLQAMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD---LVKFLSLD 315 (358)
T ss_pred -CCCC--cEEEecc-cCC-HHHHHHhcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc---CccEEeCC
Confidence 2244 5666554 333 4457899999999999 79999999999999999999998887766554 3344443
Q ss_pred cccchh
Q 004697 719 AVAEQV 724 (736)
Q Consensus 719 ~~~~ev 724 (736)
.+.+++
T Consensus 316 ~~~~~~ 321 (358)
T cd03812 316 ESPEIW 321 (358)
T ss_pred CCHHHH
Confidence 333444
No 33
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.38 E-value=4e-06 Score=90.51 Aligned_cols=140 Identities=15% Similarity=0.135 Sum_probs=101.8
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHH-HHHHHHHHHHHHHhcCC
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNA-KRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~a-K~iIk~I~~la~~in~d 639 (736)
.++...++++.|+..+|+.++ ++..+.++.+. . .+.++++.|.....+... .. .+..+++..
T Consensus 217 ~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l~~~---~-------~~~~l~i~G~~~~~~~~~~~~---~~~~~~~~~--- 279 (398)
T cd03800 217 DPDKPRILAVGRLDPRKGIDT-LIRAYAELPEL---R-------ERANLVIVGGPRDDILAMDEE---ELRELAREL--- 279 (398)
T ss_pred CCCCcEEEEEcccccccCHHH-HHHHHHHHHHh---C-------CCeEEEEEECCCCcchhhhhH---HHHHHHHhc---
Confidence 456788899999999999998 88888776542 1 256788887665543321 11 233333322
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
.+.+ +|.|+.-.+.+-...+++.||+.+.+|. .|++|++-+-||..|.+.|++-.|..-|+.++ .++|++|..
T Consensus 280 -~~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~--~~~g~~~~~ 352 (398)
T cd03800 280 -GVID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTALEAMACGLPVVATAVGGPRDIVVD--GVTGLLVDP 352 (398)
T ss_pred -CCCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHHHHHHhcCCCEEECCCCCHHHHccC--CCCeEEeCC
Confidence 1234 6888887777777778899999999999 89999999999999999999988887776654 268999964
Q ss_pred -ccchh
Q 004697 720 -VAEQV 724 (736)
Q Consensus 720 -~~~ev 724 (736)
+.+++
T Consensus 353 ~~~~~l 358 (398)
T cd03800 353 RDPEAL 358 (398)
T ss_pred CCHHHH
Confidence 34443
No 34
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.34 E-value=8.8e-06 Score=93.99 Aligned_cols=289 Identities=17% Similarity=0.215 Sum_probs=162.3
Q ss_pred hhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCc
Q 004697 302 QQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVL 381 (736)
Q Consensus 302 Qe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~ 381 (736)
+-..||-++- ..|..|.+.. .. ..+++.|+|||-++++ +-++|... ..-.+|||||--+
T Consensus 120 ea~~Fgyava-~fi~~f~~~~----~~--~~~ViaHfHEWmaG~g-ll~lr~~~-------------~~VaTvFTTHAT~ 178 (633)
T PF05693_consen 120 EAVMFGYAVA-WFIEEFYKFY----EE--KPKVIAHFHEWMAGVG-LLYLRKRK-------------PDVATVFTTHATL 178 (633)
T ss_dssp HHHHHHHHHH-HHHHHHHHH-----S---SEEEEEEEESGGGTTH-HHHHHHTT--------------SCEEEEEESS-H
T ss_pred HHHHHHHHHH-HHHHHHHHhh----cC--CCcEEEEechHhHhHH-HHHHhccC-------------CCeeEEEEecccc
Confidence 3366776664 3455655433 11 4678999999999999 44555532 6788999999754
Q ss_pred h------------hhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhh
Q 004697 382 P------------EALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVV 449 (736)
Q Consensus 382 p------------eg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~ 449 (736)
. .-++.|+.+.+.. ..+| . .+..|-..|..
T Consensus 179 lGR~l~~~~~~~Y~~L~~~~~d~eA~--------------------------------~~~i-~-----~k~~iEraaA~ 220 (633)
T PF05693_consen 179 LGRYLAANNKDFYNNLDKFNGDQEAG--------------------------------ERNI-Y-----HKHSIERAAAH 220 (633)
T ss_dssp HHHHHTTTSS-TTTSGTTS-HHHHHH--------------------------------HTT--H-----HHHHHHHHHHH
T ss_pred hhhHhhcCCCcHHHHhhccCcccccc--------------------------------Cccc-h-----HHHHHHHHHHH
Confidence 3 1122222221110 1111 1 15678889999
Q ss_pred ccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCC
Q 004697 450 SAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 529 (736)
Q Consensus 450 ~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~ 529 (736)
.+|-.++||.+=+.+.+ .+++ --|+-+. -||++....- .
T Consensus 221 ~AdvFTTVSeITa~Ea~-~LL~----r~pDvV~--pNGl~v~~~~----------------------------------~ 259 (633)
T PF05693_consen 221 YADVFTTVSEITAKEAE-HLLK----RKPDVVT--PNGLNVDKFP----------------------------------A 259 (633)
T ss_dssp HSSEEEESSHHHHHHHH-HHHS----S--SEE------B-GGGTS----------------------------------S
T ss_pred hcCeeeehhhhHHHHHH-HHhC----CCCCEEc--CCCccccccc----------------------------------c
Confidence 99999999999888886 3333 1243232 3898776651 1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CcCCCC-ceeeeecccc-ccchhccchhhHHHHHHHHHHhcCcccccCCC
Q 004697 530 NTELQAEWESAKMASKKHLADYIWRVT-G-VTIDPN-SLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 605 (736)
Q Consensus 530 d~~~~~~~~~~K~~nK~~L~~~i~~~~-g-~~ldp~-~l~d~~vkR~-~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~ 605 (736)
..+ ++..|..+|+++.++++..+ | .++||+ .++..-+.|. =.-|+.|+ .+..+.||.+.+..... +.+
T Consensus 260 ~~e----fqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~-fieAL~rLn~~lk~~~~---~~t 331 (633)
T PF05693_consen 260 LHE----FQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDV-FIEALARLNHRLKQAGS---DKT 331 (633)
T ss_dssp TTH----HHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHH-HHHHHHHHHHHHHHTT----S-E
T ss_pred chH----HHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccH-HHHHHHHHHHHHhhcCC---CCe
Confidence 222 45788999999999999875 4 367775 5666667887 35699999 99999999864431111 111
Q ss_pred CeEEEEE-ecCCC-------CCHHHHHHHHHHHHHHHHh-----------------------------------------
Q 004697 606 PRTIMIG-GKAFA-------TYTNAKRIVKLVNDVGEVV----------------------------------------- 636 (736)
Q Consensus 606 P~q~If~-GKA~P-------~y~~aK~iIk~I~~la~~i----------------------------------------- 636 (736)
=+.||+- ++.+- +.-.-|++-.-+.++.+.+
T Consensus 332 VVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lP 411 (633)
T PF05693_consen 332 VVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLP 411 (633)
T ss_dssp EEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T---
T ss_pred EEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCC
Confidence 1223322 11110 1111111111111111111
Q ss_pred ----------cCCcC------------CCCcceEEEEcCCChhHH-------hhhcccccccccCCCCCccCCCcchhhh
Q 004697 637 ----------NTDPE------------VNSYLKVVFVPNYNVSVA-------ELLIPGSELSQHISTAGMEASGTSNMKF 687 (736)
Q Consensus 637 ----------n~dp~------------~~~~lkVvFlenY~vslA-------~~iv~gaDv~l~~s~~~~EASGTs~MKa 687 (736)
++||. -.++.||+|+|.|=-+-- .-++.|||+-.-||. +||-|---+-+
T Consensus 412 Pi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSY--YEPWGYTPlE~ 489 (633)
T PF05693_consen 412 PITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSY--YEPWGYTPLEC 489 (633)
T ss_dssp -SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--S--SBSS-HHHHHH
T ss_pred CeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccc--cccccCChHHH
Confidence 23432 246799999998833322 347899999999999 99999999999
Q ss_pred hhcCceeEEe-ccc
Q 004697 688 SLNGCLIIGT-LDG 700 (736)
Q Consensus 688 ~lNGal~i~t-lDG 700 (736)
...|.++|.| |.|
T Consensus 490 ~a~gVPsITTnLsG 503 (633)
T PF05693_consen 490 TAFGVPSITTNLSG 503 (633)
T ss_dssp HHTT--EEEETTBH
T ss_pred hhcCCceeeccchh
Confidence 9999999987 455
No 35
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.32 E-value=5.9e-06 Score=86.99 Aligned_cols=134 Identities=16% Similarity=0.098 Sum_probs=100.8
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
.++...++++.|+..+|+.++ ++..+..+.. . + .++++++.|...+.+......+ .. .
T Consensus 192 ~~~~~~i~~~G~~~~~K~~~~-~l~~~~~~~~--~-~-------~~~~l~i~G~~~~~~~~~~~~~---~~--------~ 249 (365)
T cd03809 192 LLPRPYFLYVGTIEPRKNLER-LLEAFARLPA--K-G-------PDPKLVIVGKRGWLNEELLARL---RE--------L 249 (365)
T ss_pred CCCCCeEEEeCCCccccCHHH-HHHHHHHHHH--h-c-------CCCCEEEecCCccccHHHHHHH---HH--------c
Confidence 356678899999999999998 8887777644 2 1 1578999998887777643333 11 1
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
...+ +|.|+...+-+-...++..||+.+.+|+ .|..|.+-+-+|..|.+.|+|-.|+..|+.. ++++.|...
T Consensus 250 ~~~~--~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~----~~~~~~~~~ 321 (365)
T cd03809 250 GLGD--RVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVAG----DAALYFDPL 321 (365)
T ss_pred CCCC--eEEECCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCccceec----CceeeeCCC
Confidence 2244 6888877777777888999999999998 8999999999999999999998888766542 466666543
Q ss_pred -cchh
Q 004697 721 -AEQV 724 (736)
Q Consensus 721 -~~ev 724 (736)
.+++
T Consensus 322 ~~~~~ 326 (365)
T cd03809 322 DPEAL 326 (365)
T ss_pred CHHHH
Confidence 4444
No 36
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.28 E-value=7e-06 Score=91.77 Aligned_cols=129 Identities=18% Similarity=0.159 Sum_probs=94.5
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~ 643 (736)
.+.++++.|+.++|+.+. ++..+.++.+ . + .++++++.|.+.. -.++.+++.++ .+.
T Consensus 222 ~~~il~vGrl~~~Kg~~~-ll~a~~~l~~--~-~-------~~~~l~ivG~G~~----~~~l~~~~~~~--------~l~ 278 (406)
T PRK15427 222 PLEIISVARLTEKKGLHV-AIEACRQLKE--Q-G-------VAFRYRILGIGPW----ERRLRTLIEQY--------QLE 278 (406)
T ss_pred CeEEEEEeCcchhcCHHH-HHHHHHHHHh--h-C-------CCEEEEEEECchh----HHHHHHHHHHc--------CCC
Confidence 456889999999999999 8888877643 2 1 2578999997632 12233333332 234
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCC----ccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 644 ~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~----~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
+ +|.|+.-.+-+-...++.+||++..+|..+ +|..|+.-|-+|.-|.+.|+|-.|...|+.++ +++||++..
T Consensus 279 ~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~--~~~G~lv~~ 354 (406)
T PRK15427 279 D--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA--DKSGWLVPE 354 (406)
T ss_pred C--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC--CCceEEeCC
Confidence 5 677765544444567889999999999853 58888999999999999999999988776654 369999964
No 37
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.26 E-value=1.1e-05 Score=84.93 Aligned_cols=137 Identities=12% Similarity=0.067 Sum_probs=97.5
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHH-HHHHHHHHHHhcCCc
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI-VKLVNDVGEVVNTDP 640 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~i-Ik~I~~la~~in~dp 640 (736)
++...++++.|++++|+.++ ++..+.++.+ . + .+.++++.|..++....-+.. .+++.++
T Consensus 183 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~~~~--~-~-------~~~~l~i~G~~~~~~~~~~~~~~~~i~~~-------- 243 (366)
T cd03822 183 DGRPVLLTFGLLRPYKGLEL-LLEALPLLVA--K-H-------PDVRLLVAGETHPDLERYRGEAYALAERL-------- 243 (366)
T ss_pred CCCeEEEEEeeccCCCCHHH-HHHHHHHHHh--h-C-------CCeEEEEeccCccchhhhhhhhHhHHHhc--------
Confidence 56788899999999999998 8888877654 2 2 267999999988766542211 0112222
Q ss_pred CCCCcceEEEEcC-CChhHHhhhcccccccccCCCCCcc--CCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEe
Q 004697 641 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGME--ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (736)
Q Consensus 641 ~~~~~lkVvFlen-Y~vslA~~iv~gaDv~l~~s~~~~E--ASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~F 717 (736)
.+.+ +|.|+.. ..-+-...+++.||+..++|+ .| ..|..-+-||..|.+.|+|-.|. .|... ..++|++|
T Consensus 244 ~~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~--~~~~g~~~ 316 (366)
T cd03822 244 GLAD--RVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVL--DGGTGLLV 316 (366)
T ss_pred CCCC--cEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheee--eCCCcEEE
Confidence 2345 7999988 555566778899999999999 88 55666677899999999998887 44332 24688988
Q ss_pred ccc-cchh
Q 004697 718 GAV-AEQV 724 (736)
Q Consensus 718 G~~-~~ev 724 (736)
... ++++
T Consensus 317 ~~~d~~~~ 324 (366)
T cd03822 317 PPGDPAAL 324 (366)
T ss_pred cCCCHHHH
Confidence 754 4444
No 38
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.26 E-value=1.5e-05 Score=90.28 Aligned_cols=129 Identities=13% Similarity=0.135 Sum_probs=89.2
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
.|+.++++++.|+..+|+.+. ++..+.++ | +..++|+|.+ |. . + .+.++++
T Consensus 260 ~~~~~~i~~vGrl~~~K~~~~-li~a~~~~-------~-------~~~l~ivG~G-~~-~---~---~l~~~~~------ 310 (465)
T PLN02871 260 EPEKPLIVYVGRLGAEKNLDF-LKRVMERL-------P-------GARLAFVGDG-PY-R---E---ELEKMFA------ 310 (465)
T ss_pred CCCCeEEEEeCCCchhhhHHH-HHHHHHhC-------C-------CcEEEEEeCC-hH-H---H---HHHHHhc------
Confidence 357788999999999999887 54433221 1 4689999964 21 1 1 2222222
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhh-cCCccEEEecc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE-IGEENFFLFGA 719 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~-~g~~n~f~FG~ 719 (736)
.. +|.|+.--.-+-...++++||+...+|. .|..|..-+-+|..|.+.|+|-.|...|+.+. ...++||+|..
T Consensus 311 --~~--~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~ 384 (465)
T PLN02871 311 --GT--PTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTP 384 (465)
T ss_pred --cC--CeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCC
Confidence 11 4666543222445568899999999998 89999999999999999999988887777654 12379999964
Q ss_pred -ccchh
Q 004697 720 -VAEQV 724 (736)
Q Consensus 720 -~~~ev 724 (736)
+.+++
T Consensus 385 ~d~~~l 390 (465)
T PLN02871 385 GDVDDC 390 (465)
T ss_pred CCHHHH
Confidence 34443
No 39
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.26 E-value=3e-05 Score=85.92 Aligned_cols=188 Identities=12% Similarity=0.080 Sum_probs=120.0
Q ss_pred chhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhh
Q 004697 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (736)
Q Consensus 445 ~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l 524 (736)
..++..++.+..||+--.+.+++. .+-+.++.-|.|||+..++. |.
T Consensus 166 ~~~~~~ad~ii~~S~~~~~~~~~~------~~~~~~i~vi~ngvd~~~~~----~~------------------------ 211 (412)
T PRK10307 166 RSLLRRFDNVSTISRSMMNKAREK------GVAAEKVIFFPNWSEVARFQ----PV------------------------ 211 (412)
T ss_pred HHHHhhCCEEEecCHHHHHHHHHc------CCCcccEEEECCCcCHhhcC----CC------------------------
Confidence 344556888888998777766532 23356788888999887772 11
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCC
Q 004697 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (736)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~ 604 (736)
.+. .. .. +++.+|+ +++.++++++.|+.++|+++. ++..+.++ +. .
T Consensus 212 ----~~~-------~~-~~--------~~~~~~~--~~~~~~i~~~G~l~~~kg~~~-li~a~~~l---~~-~------- 257 (412)
T PRK10307 212 ----ADA-------DV-DA--------LRAQLGL--PDGKKIVLYSGNIGEKQGLEL-VIDAARRL---RD-R------- 257 (412)
T ss_pred ----Ccc-------ch-HH--------HHHHcCC--CCCCEEEEEcCccccccCHHH-HHHHHHHh---cc-C-------
Confidence 000 00 00 1223443 467788999999999999998 88777654 22 1
Q ss_pred CCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcc-
Q 004697 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTS- 683 (736)
Q Consensus 605 ~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs- 683 (736)
.++++++.|.+. . . . .+.+.++..+ -+ +|.|+....-+-...++++||+.+.+|+ .|+.|..
T Consensus 258 ~~~~l~ivG~g~-~-~--~----~l~~~~~~~~-----l~--~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e~~~~~~ 320 (412)
T PRK10307 258 PDLIFVICGQGG-G-K--A----RLEKMAQCRG-----LP--NVHFLPLQPYDRLPALLKMADCHLLPQK--AGAADLVL 320 (412)
T ss_pred CCeEEEEECCCh-h-H--H----HHHHHHHHcC-----CC--ceEEeCCCCHHHHHHHHHhcCEeEEeec--cCcccccC
Confidence 147899999753 1 1 1 2333333221 12 5888865566677788999999999998 5776543
Q ss_pred ---hhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 684 ---NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 684 ---~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
-.-+|..|.+.|+|..|-. ++.+.+. ++|++|..
T Consensus 321 p~kl~eama~G~PVi~s~~~g~-~~~~~i~-~~G~~~~~ 357 (412)
T PRK10307 321 PSKLTNMLASGRNVVATAEPGT-ELGQLVE-GIGVCVEP 357 (412)
T ss_pred cHHHHHHHHcCCCEEEEeCCCc-hHHHHHh-CCcEEeCC
Confidence 2357899999999876532 1122222 69999964
No 40
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.24 E-value=2.7e-05 Score=90.24 Aligned_cols=129 Identities=15% Similarity=0.116 Sum_probs=95.1
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
.++.++++++-||+..|++.. ++..+.++.+ . . .++.+++.|.+.. . . .+.+.++..
T Consensus 395 ~~~~~vIg~VgRl~~~Kg~~~-LI~A~a~llk--~-~-------pdirLvIVGdG~~--~--e----eLk~la~el---- 451 (578)
T PRK15490 395 QDADTTIGGVFRFVGDKNPFA-WIDFAARYLQ--H-H-------PATRFVLVGDGDL--R--A----EAQKRAEQL---- 451 (578)
T ss_pred CCCCcEEEEEEEEehhcCHHH-HHHHHHHHHh--H-C-------CCeEEEEEeCchh--H--H----HHHHHHHHc----
Confidence 355678999999999999998 7777766543 2 1 2578999997631 1 1 223333222
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
.+.+ +|.|+. |.-.+. .+++++|++..+|+ +|+.|.+-+-+|..|.+.|+|-.|.+.|+.++ ..|||++...
T Consensus 452 gL~d--~V~FlG-~~~Dv~-~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d--G~nG~LVp~~ 523 (578)
T PRK15490 452 GILE--RILFVG-ASRDVG-YWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIE--GVSGFILDDA 523 (578)
T ss_pred CCCC--cEEECC-ChhhHH-HHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHccc--CCcEEEECCC
Confidence 2345 677775 443444 57899999999999 89999999999999999999999988887664 4899999754
No 41
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.20 E-value=1.2e-05 Score=87.66 Aligned_cols=139 Identities=17% Similarity=0.134 Sum_probs=102.0
Q ss_pred HhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~ 634 (736)
++| ++++..+++++.||+.+|++++ ++..+..+.+. . .+.+++++|.+.+.....+++.+.+.+..
T Consensus 183 ~~~--~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~---~-------~~~~l~i~G~g~~~~~~~~~~~~~~~~~~- 248 (372)
T cd03792 183 KYG--IDPERPYITQVSRFDPWKDPFG-VIDAYRKVKER---V-------PDPQLVLVGSGATDDPEGWIVYEEVLEYA- 248 (372)
T ss_pred HhC--CCCCCcEEEEEeccccccCcHH-HHHHHHHHHhh---C-------CCCEEEEEeCCCCCCchhHHHHHHHHHHh-
Confidence 345 4578899999999999999999 88888776542 1 14689999998665444344444433322
Q ss_pred HhcCCcCCCCcceEEEEcCC--ChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCc
Q 004697 635 VVNTDPEVNSYLKVVFVPNY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (736)
Q Consensus 635 ~in~dp~~~~~lkVvFlenY--~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~ 712 (736)
...+ +|.|+... +-+....++++||++.++|+ .|..|..-+-||..|.+.|+|-.|...|+.+ +..
T Consensus 249 ------~~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~--~~~ 316 (372)
T cd03792 249 ------EGDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIE--DGE 316 (372)
T ss_pred ------CCCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhhcc--cCC
Confidence 1234 57777665 55666778999999999999 9999999999999999999987776555443 247
Q ss_pred cEEEecc
Q 004697 713 NFFLFGA 719 (736)
Q Consensus 713 n~f~FG~ 719 (736)
+||++..
T Consensus 317 ~g~~~~~ 323 (372)
T cd03792 317 TGFLVDT 323 (372)
T ss_pred ceEEeCC
Confidence 8998864
No 42
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.19 E-value=3.4e-05 Score=80.29 Aligned_cols=133 Identities=16% Similarity=0.146 Sum_probs=95.5
Q ss_pred CCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 560 ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (736)
++++.++++++.|+..+|+.++ ++..+.++.+ . . .++++++.|.+...... +..++ . +
T Consensus 189 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~i~G~~~~~~~~-~~~~~------~----~ 246 (365)
T cd03807 189 LPEDTFLIGIVARLHPQKDHAT-LLRAAALLLK--K-F-------PNARLLLVGDGPDRANL-ELLAL------K----E 246 (365)
T ss_pred CCCCCeEEEEecccchhcCHHH-HHHHHHHHHH--h-C-------CCeEEEEecCCcchhHH-HHHHH------H----h
Confidence 3467788999999999999998 8888777654 2 1 25899999987654332 22221 1 1
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
-.+.+ +|.|+.. .-. ...++..||+.+.+|+ .|..|++-+-||..|.+.|++..|..-|+.++ +|++|..
T Consensus 247 ~~~~~--~v~~~g~-~~~-~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~~~ 316 (365)
T cd03807 247 LGLED--KVILLGE-RSD-VPALLNALDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLVPP 316 (365)
T ss_pred cCCCc--eEEEccc-ccc-HHHHHHhCCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEeCC
Confidence 12244 5666653 223 3468899999999999 69999999999999999999988888766653 7888864
Q ss_pred -ccchh
Q 004697 720 -VAEQV 724 (736)
Q Consensus 720 -~~~ev 724 (736)
+.+++
T Consensus 317 ~~~~~l 322 (365)
T cd03807 317 GDPEAL 322 (365)
T ss_pred CCHHHH
Confidence 34433
No 43
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.18 E-value=1.6e-05 Score=85.09 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=96.7
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~ 643 (736)
...++++.|+..+|+.+. ++..+..+.+ . + .+..+++.|.+. +. . .+..+++.. .+.
T Consensus 188 ~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~ivG~g~--~~--~----~~~~~~~~~----~~~ 244 (367)
T cd05844 188 PPRILFVGRFVEKKGPLL-LLEAFARLAR--R-V-------PEVRLVIIGDGP--LL--A----ALEALARAL----GLG 244 (367)
T ss_pred CcEEEEEEeeccccChHH-HHHHHHHHHH--h-C-------CCeEEEEEeCch--HH--H----HHHHHHHHc----CCC
Confidence 356889999999999998 8887777654 2 1 257899999642 11 1 233333321 124
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCC----ccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 644 ~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~----~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
+ +|.|+...+-+--..++.+||+...+|..+ .|++|++-+=+|.-|.+.|++-.|.+.|+..+ .++|++|..
T Consensus 245 ~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~--~~~g~~~~~ 320 (367)
T cd05844 245 G--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED--GETGLLVPE 320 (367)
T ss_pred C--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheec--CCeeEEECC
Confidence 4 688888776666667889999999998742 58999999999999999999988888776543 378999964
Q ss_pred -ccchh
Q 004697 720 -VAEQV 724 (736)
Q Consensus 720 -~~~ev 724 (736)
+.+++
T Consensus 321 ~d~~~l 326 (367)
T cd05844 321 GDVAAL 326 (367)
T ss_pred CCHHHH
Confidence 44444
No 44
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.16 E-value=1.1e-05 Score=84.18 Aligned_cols=136 Identities=13% Similarity=0.110 Sum_probs=104.3
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
.++.+.++++.|+.+.|+.++ ++..+.++.+ . . .+.++++.|++.+.+.. .+..+++..
T Consensus 200 ~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~i~G~~~~~~~~------~~~~~~~~~---- 258 (375)
T cd03821 200 LPDKRIILFLGRLHPKKGLDL-LIEAFAKLAE--R-F-------PDWHLVIAGPDEGGYRA------ELKQIAAAL---- 258 (375)
T ss_pred CCCCcEEEEEeCcchhcCHHH-HHHHHHHhhh--h-c-------CCeEEEEECCCCcchHH------HHHHHHHhc----
Confidence 467788999999999999998 8888877654 2 1 25799999998877766 233322222
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
...+ +|.|+...+-+--..++..||+..++|+ .|.+|++-+-+|..|.+.|+|-.|...|+... +++|+...+
T Consensus 259 ~~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~---~~~~~~~~~ 331 (375)
T cd03821 259 GLED--RVTFTGMLYGEDKAAALADADLFVLPSH--SENFGIVVAEALACGTPVVTTDKVPWQELIEY---GCGWVVDDD 331 (375)
T ss_pred Cccc--eEEEcCCCChHHHHHHHhhCCEEEeccc--cCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc---CceEEeCCC
Confidence 2345 6788776665555667888999999999 69999999999999999999988888776654 688888777
Q ss_pred cchh
Q 004697 721 AEQV 724 (736)
Q Consensus 721 ~~ev 724 (736)
.+++
T Consensus 332 ~~~~ 335 (375)
T cd03821 332 VDAL 335 (375)
T ss_pred hHHH
Confidence 5554
No 45
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.12 E-value=1.4e-05 Score=77.21 Aligned_cols=133 Identities=22% Similarity=0.227 Sum_probs=97.6
Q ss_pred CCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 560 ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (736)
.+.+..+++++.|+..+|+.++ ++..+.++.+-.. .+..+++.|..... + .+...++..
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l~i~G~~~~~----~----~~~~~~~~~--- 69 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKKN---------PNYKLVIVGDGEYK----K----ELKNLIEKL--- 69 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHHH---------TTEEEEEESHCCHH----H----HHHHHHHHT---
T ss_pred CCCCCeEEEEEecCccccCHHH-HHHHHHHHHhhcC---------CCeEEEEEcccccc----c----ccccccccc---
Confidence 4577899999999999999999 9999988864212 26799999922221 1 222222222
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
.+.. +|.|+....-.--..++..||+.+.+|+ .|..|++-+-+|..|.++|++..|..-|+.... .||++|-.
T Consensus 70 -~~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~--~~g~~~~~ 142 (172)
T PF00534_consen 70 -NLKE--NIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDG--VNGFLFDP 142 (172)
T ss_dssp -TCGT--TEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT--TSEEEEST
T ss_pred -cccc--cccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccc--cceEEeCC
Confidence 1234 6888877765666778888999999999 699999999999999999999999888877764 48999965
Q ss_pred c
Q 004697 720 V 720 (736)
Q Consensus 720 ~ 720 (736)
.
T Consensus 143 ~ 143 (172)
T PF00534_consen 143 N 143 (172)
T ss_dssp T
T ss_pred C
Confidence 5
No 46
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.11 E-value=4.9e-05 Score=80.59 Aligned_cols=125 Identities=14% Similarity=0.147 Sum_probs=89.6
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
+++.++.+++.|+...|+..+ ++..+.++.+ . . .+++|++.|.+.-. +.+.+.+..+.
T Consensus 185 ~~~~~~~l~~g~~~~~kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~~~----~~~~~~~~~~~------- 242 (360)
T cd04951 185 KNDTFVILAVGRLVEAKDYPN-LLKAFAKLLS--D-Y-------LDIKLLIAGDGPLR----ATLERLIKALG------- 242 (360)
T ss_pred CCCCEEEEEEeeCchhcCcHH-HHHHHHHHHh--h-C-------CCeEEEEEcCCCcH----HHHHHHHHhcC-------
Confidence 467789999999999999999 8887776644 2 1 25799999964311 23333332221
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEec
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG 718 (736)
..+ +|.|+.. - +-...++.+||+.+.+|+ .|..|..-+=+|..|.+.|++-.|...|+.+. +|+.|-
T Consensus 243 -~~~--~v~~~g~-~-~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----~g~~~~ 309 (360)
T cd04951 243 -LSN--RVKLLGL-R-DDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVVGD----SGLIVP 309 (360)
T ss_pred -CCC--cEEEecc-c-ccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEecC----CceEeC
Confidence 233 5777653 2 233467899999999999 79999999999999999999988877766543 677774
No 47
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.10 E-value=7.1e-06 Score=80.33 Aligned_cols=120 Identities=18% Similarity=0.121 Sum_probs=94.9
Q ss_pred eccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceE
Q 004697 569 QVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKV 648 (736)
Q Consensus 569 ~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkV 648 (736)
++.|+..+|+.++ ++..+.++.+ . . .+++++|.|+..+.+...+. +.. ....+ +|
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l~~--~-~-------~~~~~~i~G~~~~~~~~~~~----~~~--------~~~~~--~v 163 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALLKE--R-G-------PDLKLVIAGDGPEREYLEEL----LAA--------LLLLD--RV 163 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCCChHHHHHH----HHh--------cCCcc--cE
Confidence 8889999999999 8888777754 2 1 26899999999887766433 111 11234 68
Q ss_pred EEEcCC-ChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEe
Q 004697 649 VFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (736)
Q Consensus 649 vFlenY-~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~F 717 (736)
.|+..+ ..+..+.+..+||+.+.+|+ .|++|++-+-+|..|.+.|+|.+|+.-|+.++ .++||+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~--~~~g~~~ 229 (229)
T cd01635 164 IFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVED--GLTGLLV 229 (229)
T ss_pred EEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEEC--CCceEEC
Confidence 888887 66778888888999999999 78999999999999999999999999876443 4788876
No 48
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.10 E-value=1.2e-05 Score=88.56 Aligned_cols=143 Identities=17% Similarity=0.239 Sum_probs=102.3
Q ss_pred CCCCceeeeeccc-cccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHH----HH-HHHHHHHHHH
Q 004697 560 IDPNSLFDIQVKR-IHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN----AK-RIVKLVNDVG 633 (736)
Q Consensus 560 ldp~~l~d~~vkR-~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~----aK-~iIk~I~~la 633 (736)
+.++..+++++.| +..+|+.++ ++..+.++.+ . .| ++.+++.|...|.|.. +. ..-+++.+++
T Consensus 207 ~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~l~~--~-~~-------~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~ 275 (396)
T cd03818 207 LTPGDEVITFVARNLEPYRGFHV-FMRALPRLLR--A-RP-------DARVVIVGGDGVSYGAPPPDGESWKQHMLDELG 275 (396)
T ss_pred CCCCCeEEEEECCCcccccCHHH-HHHHHHHHHH--H-CC-------CcEEEEEcCCCcccCCCCCCcccHHHHHHHHhh
Confidence 4567788999998 999999999 8888877654 2 22 4788998876654421 11 1112333333
Q ss_pred HHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCcc
Q 004697 634 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEEN 713 (736)
Q Consensus 634 ~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n 713 (736)
...+ .+ +|.|+....-+-...++.+||+.+.+|. .|..|.+-+-+|.-|.+.|+|-.|..-|+.++ .+|
T Consensus 276 ~~~~-----~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~--~~~ 344 (396)
T cd03818 276 GRLD-----LS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITD--GEN 344 (396)
T ss_pred cccC-----cc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhccc--CCc
Confidence 2211 23 6888877655556678899999999998 78899999999999999999999988776654 368
Q ss_pred EEEecc-ccchh
Q 004697 714 FFLFGA-VAEQV 724 (736)
Q Consensus 714 ~f~FG~-~~~ev 724 (736)
|+++.. +.+++
T Consensus 345 G~lv~~~d~~~l 356 (396)
T cd03818 345 GLLVDFFDPDAL 356 (396)
T ss_pred eEEcCCCCHHHH
Confidence 999864 34444
No 49
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=98.00 E-value=7.5e-05 Score=85.22 Aligned_cols=142 Identities=13% Similarity=0.123 Sum_probs=93.9
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCC-CHHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFAT-YTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~-y~~aK~iIk~I~~la~~in~dp~ 641 (736)
+..+++.|.|++..|+... ++..++++.+ + +|..+ ..++++..|...-+ ...-.++.+.+.+++..+|..-.
T Consensus 258 ~~~vIl~VgRLd~~KGi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~ 330 (456)
T TIGR02400 258 GRKLIIGVDRLDYSKGLPE-RLLAFERFLE--E-HPEWR---GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFG 330 (456)
T ss_pred CCeEEEEccccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccC
Confidence 5678889999999999999 9999998865 3 44321 13556555432211 22234566777777777753211
Q ss_pred CCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCce-----eEEeccccchhhhhhcCCccEE
Q 004697 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL-----IIGTLDGANVEIRQEIGEENFF 715 (736)
Q Consensus 642 ~~~~lkVvFlen-Y~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal-----~i~tlDGa~vEi~e~~g~~n~f 715 (736)
..+...|+|+.. .+-+---.++.+|||.+.+|+ .|.-|..-+-||.-|.+ .+|...|+--++ + +++
T Consensus 331 ~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~--~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l----~--~gl 402 (456)
T TIGR02400 331 TLDWTPIRYLNRSYDREELMALYRAADVGLVTPL--RDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL----N--GAL 402 (456)
T ss_pred CCCCccEEEEcCCCCHHHHHHHHHhCcEEEECcc--ccccCccHHHHHHhcCCCCceEEEeCCCCChHHh----C--CcE
Confidence 111123666654 345555567899999999999 89999999999877775 666667765433 2 678
Q ss_pred Eecc
Q 004697 716 LFGA 719 (736)
Q Consensus 716 ~FG~ 719 (736)
++..
T Consensus 403 lVnP 406 (456)
T TIGR02400 403 LVNP 406 (456)
T ss_pred EECC
Confidence 8753
No 50
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.97 E-value=5.4e-05 Score=83.68 Aligned_cols=134 Identities=15% Similarity=0.143 Sum_probs=99.6
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCC
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y-~~aK~iIk~I~~la~~in~d 639 (736)
+++...++++.|+..+|+.+. ++..+.++.+ . .| ++.+++.|.+.... .......+.+.++++..
T Consensus 190 ~~~~~~il~~Grl~~~Kg~~~-Li~A~~~l~~--~-~p-------~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l--- 255 (380)
T PRK15484 190 SPDETVLLYAGRISPDKGILL-LMQAFEKLAT--A-HS-------NLKLVVVGDPTASSKGEKAAYQKKVLEAAKRI--- 255 (380)
T ss_pred CCCCeEEEEeccCccccCHHH-HHHHHHHHHH--h-CC-------CeEEEEEeCCccccccchhHHHHHHHHHHHhc---
Confidence 456678899999999999999 8888877654 2 22 47888888764321 11223444555555433
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCc-cCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEe
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~-EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~F 717 (736)
+. +|.|+..-.-+-...++++||+...+|+ + |+.|+.-+-||..|.+.|+|-.|...|+.++ ..|||++
T Consensus 256 ---~~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~--~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~--~~~G~~l 325 (380)
T PRK15484 256 ---GD--RCIMLGGQPPEKMHNYYPLADLVVVPSQ--VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE--GITGYHL 325 (380)
T ss_pred ---CC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--CccccccHHHHHHHcCCCEEEeCCCCcHhhccc--CCceEEE
Confidence 33 6788776555566778899999999997 5 9999999999999999999999988887764 3689965
No 51
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.96 E-value=0.00013 Score=77.51 Aligned_cols=125 Identities=10% Similarity=-0.007 Sum_probs=92.8
Q ss_pred CCCceeeeecccccc--chhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcC
Q 004697 561 DPNSLFDIQVKRIHE--YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNT 638 (736)
Q Consensus 561 dp~~l~d~~vkR~~e--YKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~ 638 (736)
+++..+..+..|... +|+.++ ++..+..+.+. . ..+.++++.|...+....
T Consensus 188 ~~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~l~~~-~--------~~~~~~~i~G~~~~~~~~----------------- 240 (365)
T cd03825 188 PADKKIILFGAVGGTDPRKGFDE-LIEALKRLAER-W--------KDDIELVVFGASDPEIPP----------------- 240 (365)
T ss_pred CCCCeEEEEEecCCCccccCHHH-HHHHHHHhhhc-c--------CCCeEEEEeCCCchhhhc-----------------
Confidence 455556666767665 899998 88777665431 0 126799999987654331
Q ss_pred CcCCCCcceEEEEcCCC-hhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEe
Q 004697 639 DPEVNSYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (736)
Q Consensus 639 dp~~~~~lkVvFlenY~-vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~F 717 (736)
.... +|.|+...+ ...-..++..||+.+.+|+ .|+.|++-+-||..|.+.|++-.|...|+... .++||++
T Consensus 241 --~~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~--~~~g~~~ 312 (365)
T cd03825 241 --DLPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVDH--GVTGYLA 312 (365)
T ss_pred --cCCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChhheeC--CCceEEe
Confidence 1133 577777766 5556678899999999999 89999999999999999999999988876654 3688888
Q ss_pred ccc
Q 004697 718 GAV 720 (736)
Q Consensus 718 G~~ 720 (736)
...
T Consensus 313 ~~~ 315 (365)
T cd03825 313 KPG 315 (365)
T ss_pred CCC
Confidence 753
No 52
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.91 E-value=0.00025 Score=73.59 Aligned_cols=130 Identities=17% Similarity=0.114 Sum_probs=96.8
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
+.+.+.++++.|+...|+... ++..+.++.+ . + .+.++++.|.+.+.. .+.+.+. +.
T Consensus 199 ~~~~~~i~~~g~~~~~k~~~~-li~~~~~~~~--~-~-------~~~~l~i~g~~~~~~----~~~~~~~--------~~ 255 (377)
T cd03798 199 PEDKKVILFVGRLVPRKGIDY-LIEALARLLK--K-R-------PDVHLVIVGDGPLRE----ALEALAA--------EL 255 (377)
T ss_pred CCCceEEEEeccCccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEcCCcchH----HHHHHHH--------hc
Confidence 356788999999999999998 8887776643 1 1 268899999865432 2222222 12
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
...+ .|.|+...+-+-...++..||+.+.+|+ .|+.|++-+-+|..|.+.|++..|...|..+. ..+||+|..
T Consensus 256 ~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~--~~~g~~~~~ 328 (377)
T cd03798 256 GLED--RVTFLGAVPHEEVPAYYAAADVFVLPSL--REGFGLVLLEAMACGLPVVATDVGGIPEIITD--GENGLLVPP 328 (377)
T ss_pred CCcc--eEEEeCCCCHHHHHHHHHhcCeeecchh--hccCChHHHHHHhcCCCEEEecCCChHHHhcC--CcceeEECC
Confidence 2344 6777777666666788899999999999 69999999999999999999999988777654 255788764
No 53
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.87 E-value=5.6e-05 Score=80.06 Aligned_cols=129 Identities=16% Similarity=0.097 Sum_probs=97.1
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
.+...++++.|+.++|+.+. ++..+.++. ++.++++|.+... ..+.+.+... .
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~-li~a~~~l~--------------~~~l~i~G~g~~~----~~~~~~~~~~--------~ 241 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDV-LLEAAAALP--------------DAPLVIVGEGPLE----AELEALAAAL--------G 241 (357)
T ss_pred CCCcEEEEecccccccCHHH-HHHHHHhcc--------------CcEEEEEeCChhH----HHHHHHHHhc--------C
Confidence 45678899999999999998 766655431 4689999976422 2222333222 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
... +|.|+...+-+....++..||+..++|....|+.|++-+-+|..|.+.|+|-.|..-|..+. .++|||+|..+
T Consensus 242 ~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~-~~~~g~~~~~~ 317 (357)
T cd03795 242 LLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL-HGVTGLVVPPG 317 (357)
T ss_pred Ccc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh-CCCceEEeCCC
Confidence 244 79999888876677888999999999987789999999999999999999988877665554 35799998643
No 54
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.86 E-value=5.3e-05 Score=78.48 Aligned_cols=130 Identities=16% Similarity=0.052 Sum_probs=98.3
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
+++.+.++++.|+..+|+.++ ++..+.++.+ . + .+++|++.|.+.+.+...+. .+....
T Consensus 185 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~~~~~---~~~~~~------- 243 (359)
T cd03808 185 PEDDPVFLFVARLLKDKGIDE-LLEAARILKA--K-G-------PNVRLLLVGDGDEENPAAIL---EIEKLG------- 243 (359)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEcCCCcchhhHHH---HHHhcC-------
Confidence 356789999999999999998 8888776644 2 1 25899999999887766433 121111
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
... +|.|+.. .+-...++..||+.+.+|+ .|.+|++-+-+|..|.+.|+|-.|..-|+.++ .++|++|..+
T Consensus 244 -~~~--~v~~~g~--~~~~~~~~~~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~--~~~g~~~~~~ 314 (359)
T cd03808 244 -LEG--RVEFLGF--RDDVPELLAAADVFVLPSY--REGLPRVLLEAMAMGRPVIATDVPGCREAVID--GVNGFLVPPG 314 (359)
T ss_pred -Ccc--eEEEeec--cccHHHHHHhccEEEecCc--ccCcchHHHHHHHcCCCEEEecCCCchhhhhc--CcceEEECCC
Confidence 133 5677655 3445568899999999999 59999999999999999999988877776654 4789999754
No 55
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.85 E-value=0.00053 Score=76.85 Aligned_cols=140 Identities=14% Similarity=0.134 Sum_probs=93.8
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
++..+++.+.|+.+.|+.+. ++..+..+.+... ... ....+.+++.|.+. . -.++.+++.+..
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~---~~~~i~l~ivG~G~-~---~~~l~~~~~~~~-------- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGP---KLPKLLCIITGKGP-L---KEKYLERIKELK-------- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-ccc---cCCCEEEEEEecCc-c---HHHHHHHHHHcC--------
Confidence 34567778899999999998 9998888765211 000 01138999999863 2 123333333221
Q ss_pred CCCcceEEEEcCC-ChhHHhhhcccccccccCCCCC-ccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 642 VNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 642 ~~~~lkVvFlenY-~vslA~~iv~gaDv~l~~s~~~-~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
+. .++|+.+| .-+-...++.+||+...++... .|.-|+.-+-+|.-|.+.|+|..|..-|+.++ .+|||+|+
T Consensus 293 l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~--~~~G~lv~- 366 (415)
T cd03816 293 LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH--GENGLVFG- 366 (415)
T ss_pred CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC--CCCEEEEC-
Confidence 22 38888765 5556667999999997433211 25556667889999999999988877777765 37999996
Q ss_pred ccchh
Q 004697 720 VAEQV 724 (736)
Q Consensus 720 ~~~ev 724 (736)
+.+++
T Consensus 367 d~~~l 371 (415)
T cd03816 367 DSEEL 371 (415)
T ss_pred CHHHH
Confidence 55555
No 56
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.81 E-value=0.0001 Score=77.23 Aligned_cols=132 Identities=17% Similarity=0.164 Sum_probs=100.2
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
+++...++++.|+..+|+.+. ++..+.++.+ . . .+.++++.|.+.. .+.+.+++ +..
T Consensus 199 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~~~--~-~-------~~~~l~i~G~~~~----~~~~~~~~----~~~---- 255 (374)
T cd03817 199 PEDEPVLLYVGRLAKEKNIDF-LIRAFARLLK--E-E-------PDVKLVIVGDGPE----REELEELA----REL---- 255 (374)
T ss_pred CCCCeEEEEEeeeecccCHHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCch----HHHHHHHH----HHc----
Confidence 456788999999999999998 8877776543 1 1 2579999997642 12222232 222
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
...+ +|.|+...+-+-...++..||+.+++|+ .|..|++-+-+|..|.+.|+|-.|+.-|+.+. .++||+|...
T Consensus 256 ~~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~--~~~g~~~~~~ 329 (374)
T cd03817 256 GLAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVAD--GENGFLFPPG 329 (374)
T ss_pred CCCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheec--CceeEEeCCC
Confidence 1234 6888888777777888999999999998 89999999999999999999999988776654 3789999765
Q ss_pred c
Q 004697 721 A 721 (736)
Q Consensus 721 ~ 721 (736)
.
T Consensus 330 ~ 330 (374)
T cd03817 330 D 330 (374)
T ss_pred C
Confidence 4
No 57
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.76 E-value=0.00012 Score=79.39 Aligned_cols=136 Identities=19% Similarity=0.166 Sum_probs=96.2
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
++.+.++++.|+.++|++++ ++..+..+.+ . .|.. ..+.++++.|.+... +.+.+++.+. .
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~~~~---~~~~~l~i~G~g~~~----~~~~~~~~~~--------~ 252 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPT-LVRAFALLVR--Q-LPEG---AERLRLVIVGDGPAR----GACEQMVRAA--------G 252 (374)
T ss_pred CCCeEEEEEecCCcccCHHH-HHHHHHHHHH--h-Cccc---ccceEEEEecCCchH----HHHHHHHHHc--------C
Confidence 56789999999999999999 8888877754 2 2210 125799999965321 2233333222 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc-c
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-V 720 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~-~ 720 (736)
+.+ .+++.++.-. -..++++||+..++|. .|++|.+-+-||..|.+.|+|-.|...|+.++ ..+|++|.. +
T Consensus 253 ~~~---~v~~~g~~~~-~~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~--~~~g~~~~~~d 324 (374)
T TIGR03088 253 LAH---LVWLPGERDD-VPALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQH--GVTGALVPPGD 324 (374)
T ss_pred Ccc---eEEEcCCcCC-HHHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcC--CCceEEeCCCC
Confidence 233 3444444333 3566799999999999 89999999999999999999999988877764 368999964 3
Q ss_pred cchh
Q 004697 721 AEQV 724 (736)
Q Consensus 721 ~~ev 724 (736)
.+++
T Consensus 325 ~~~l 328 (374)
T TIGR03088 325 AVAL 328 (374)
T ss_pred HHHH
Confidence 4433
No 58
>PHA01633 putative glycosyl transferase group 1
Probab=97.67 E-value=0.00017 Score=79.26 Aligned_cols=113 Identities=16% Similarity=0.125 Sum_probs=81.9
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
|+.+.++++.|++.+|++++ ++..+.++.+ . .|.. ....++++.|.. .+.+ ..
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~-LI~A~~~L~~--~-~p~~---~~~i~l~ivG~~------------~~~~--------l~ 198 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDL-MLQVFNELNT--K-YPDI---AKKIHFFVISHK------------QFTQ--------LE 198 (335)
T ss_pred CCCeEEEEEeCCccccCHHH-HHHHHHHHHH--h-CCCc---cccEEEEEEcHH------------HHHH--------cC
Confidence 46788899999999999999 9999888754 2 2211 013567777721 1111 12
Q ss_pred CCCcceEEEEcCCC---hhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhh
Q 004697 642 VNSYLKVVFVPNYN---VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (736)
Q Consensus 642 ~~~~lkVvFlenY~---vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi 705 (736)
+.+ +|.|+-.++ -+-...++++||+++.+|+ .|++|..-+-||..|++.|++.-|...|+
T Consensus 199 l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei 261 (335)
T PHA01633 199 VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEF 261 (335)
T ss_pred CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceee
Confidence 355 688875432 3344578999999999999 89999999999999999999866655553
No 59
>PRK10125 putative glycosyl transferase; Provisional
Probab=97.66 E-value=0.00035 Score=78.43 Aligned_cols=115 Identities=12% Similarity=-0.052 Sum_probs=77.8
Q ss_pred CCceeeeeccccccchhc--cchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 562 PNSLFDIQVKRIHEYKRQ--LLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq--~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (736)
++...++++.|+..+||. +. ++..+.+ +. .+.++++.|++.|...
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~-li~A~~~---l~----------~~~~L~ivG~g~~~~~------------------- 285 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQ-LVREMMA---LG----------DKIELHTFGKFSPFTA------------------- 285 (405)
T ss_pred CCCCEEEEEEeccccCCccHHH-HHHHHHh---CC----------CCeEEEEEcCCCcccc-------------------
Confidence 455667777786556553 43 4333322 21 1468888888654321
Q ss_pred cCCCCcceEEEEc-CCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEec
Q 004697 640 PEVNSYLKVVFVP-NYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (736)
Q Consensus 640 p~~~~~lkVvFle-nY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG 718 (736)
. +|.++. -.+..--..++++||++..+|+ .|+-|+.-+-||.-|.+.|+|--|...|+.+ ++|||++.
T Consensus 286 ----~--~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~---~~~G~lv~ 354 (405)
T PRK10125 286 ----G--NVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQ---KSGGKTVS 354 (405)
T ss_pred ----c--ceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEe---CCcEEEEC
Confidence 1 233322 1133333457899999999999 9999999999999999999999998877654 35899996
Q ss_pred cc
Q 004697 719 AV 720 (736)
Q Consensus 719 ~~ 720 (736)
..
T Consensus 355 ~~ 356 (405)
T PRK10125 355 EE 356 (405)
T ss_pred CC
Confidence 53
No 60
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.65 E-value=0.00012 Score=75.55 Aligned_cols=134 Identities=19% Similarity=0.142 Sum_probs=96.4
Q ss_pred CCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 560 ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (736)
.+++...++++.|+.+.|+..+ ++..+..+.+ . + .++++++.|.+...... .+.+..+.
T Consensus 185 ~~~~~~~i~~~g~~~~~k~~~~-~i~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~~----~~~~~~~~------ 243 (353)
T cd03811 185 IPPDGPVILAVGRLSPQKGFDT-LIRAFALLRK--E-G-------PDARLVILGDGPLREEL----EALAKELG------ 243 (353)
T ss_pred CCCCceEEEEEecchhhcChHH-HHHHHHHhhh--c-C-------CCceEEEEcCCccHHHH----HHHHHhcC------
Confidence 3466788999999999999998 8877776643 1 1 26789999976543222 12222221
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
..+ +|.|+... +-...++..||+.+.+|+ .|..|++-+-+|..|.+.|+|-.|..-|+.++ ..+||++..
T Consensus 244 --~~~--~v~~~g~~--~~~~~~~~~~d~~i~ps~--~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~--~~~g~~~~~ 313 (353)
T cd03811 244 --LAD--RVHFLGFQ--SNPYPYLKAADLFVLSSR--YEGFPNVLLEAMALGTPVVATDCPGPREILED--GENGLLVPV 313 (353)
T ss_pred --CCc--cEEEeccc--CCHHHHHHhCCEEEeCcc--cCCCCcHHHHHHHhCCCEEEcCCCChHHHhcC--CCceEEECC
Confidence 233 56665543 234568999999999999 79999999999999999999999988776654 368999876
Q ss_pred ccchh
Q 004697 720 VAEQV 724 (736)
Q Consensus 720 ~~~ev 724 (736)
+..+.
T Consensus 314 ~~~~~ 318 (353)
T cd03811 314 GDEAA 318 (353)
T ss_pred CCHHH
Confidence 54433
No 61
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.59 E-value=0.00023 Score=75.38 Aligned_cols=136 Identities=18% Similarity=0.115 Sum_probs=100.1
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
++.+.++++.|+..+|+.++ ++..+.++.+ . + .+.+++|.|.+.+..+ +-+++..+ .
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~-l~~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~----~~~~~~~~--------~ 233 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDY-LLEALALLKD--R-G-------IDFRLDIVGDGPLRDE----LEALIAEL--------G 233 (355)
T ss_pred CCCeEEEEEeeeccccCHHH-HHHHHHHHhh--c-C-------CCeEEEEEECCccHHH----HHHHHHHc--------C
Confidence 45677889999999999999 8888877644 2 1 2578999998765422 22222222 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCC----ccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEe
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~----~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~F 717 (736)
..+ .|.|.....-.-...++..||+.+.+|+.+ .|+.|++-+-+|..|.+.|++-.|..-|+.+. ..+||+|
T Consensus 234 ~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~--~~~g~~~ 309 (355)
T cd03799 234 LED--RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVED--GETGLLV 309 (355)
T ss_pred CCC--eEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhC--CCceEEe
Confidence 234 578877776667778889999999999931 29999999999999999999988887766654 2589999
Q ss_pred cc-ccchh
Q 004697 718 GA-VAEQV 724 (736)
Q Consensus 718 G~-~~~ev 724 (736)
.. +++++
T Consensus 310 ~~~~~~~l 317 (355)
T cd03799 310 PPGDPEAL 317 (355)
T ss_pred CCCCHHHH
Confidence 75 55555
No 62
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.55 E-value=0.00059 Score=70.40 Aligned_cols=135 Identities=16% Similarity=0.149 Sum_probs=98.7
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
.++.+.++++.|+...|+... ++..+..+.+ . + ..+++++.|.+ .+. . .+....+ +.
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~-~i~~~~~~~~--~-~-------~~~~l~i~G~~--~~~--~----~~~~~~~----~~ 252 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDL-LLEALAKLRK--E-Y-------PDVRLVIVGDG--PLR--E----ELEALAA----EL 252 (374)
T ss_pred cCCCeEEEEecchhhhcCHHH-HHHHHHHHhh--h-c-------CCeEEEEEeCc--HHH--H----HHHHHHH----Hh
Confidence 456788999999999999888 7777666543 2 1 25789999922 111 1 2222222 11
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
...+ +|.|+...+-+-...++..||+.+++++ .|++|+.-+-+|..|.+.|+|-.|..-|+.+. ..+|++|...
T Consensus 253 ~~~~--~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~--~~~g~~~~~~ 326 (374)
T cd03801 253 GLGD--RVTFLGFVPDEDLPALYAAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGIPEVVED--GETGLLVPPG 326 (374)
T ss_pred CCCc--ceEEEeccChhhHHHHHHhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCChhHHhcC--CcceEEeCCC
Confidence 2344 6888887765667778889999999999 59999999999999999999988888777664 4789998777
Q ss_pred -cchh
Q 004697 721 -AEQV 724 (736)
Q Consensus 721 -~~ev 724 (736)
.+++
T Consensus 327 ~~~~l 331 (374)
T cd03801 327 DPEAL 331 (374)
T ss_pred CHHHH
Confidence 4444
No 63
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.54 E-value=0.00049 Score=77.41 Aligned_cols=146 Identities=17% Similarity=0.164 Sum_probs=102.4
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
++..+++++.||...|+..+ ++..+..+.+ . .|.. ...+++++++|.+...+.. ...+.+.++++.. .
T Consensus 235 ~~~~~il~vgr~~~~K~~~~-li~A~~~l~~--~-~~~~--~~~~~~lvivG~~~~~~~~--~~~~~L~~~~~~l----~ 302 (419)
T cd03806 235 TRENQILSIAQFRPEKNHPL-QLRAFAKLLK--R-LPEE--IKEKIKLVLIGSCRNEDDE--KRVEDLKLLAKEL----G 302 (419)
T ss_pred cCCcEEEEEEeecCCCCHHH-HHHHHHHHHH--h-Cccc--ccCceEEEEEcCCCCcccH--HHHHHHHHHHHHh----C
Confidence 34578899999999999999 9998888765 2 2210 0124788888876443321 1222344444322 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccc-cchhhhhhc-CCccEEEecc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEI-GEENFFLFGA 719 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDG-a~vEi~e~~-g~~n~f~FG~ 719 (736)
+.+ +|.|+.+-+-+--..++..||+.+.+|. .|.-|.+-.-+|..|.++|++-.| ...|+.+.. ++++||+|.
T Consensus 303 l~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~- 377 (419)
T cd03806 303 LED--KVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS- 377 (419)
T ss_pred CCC--eEEEecCCCHHHHHHHHHhCeEEEECCc--cCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-
Confidence 356 7999987666666788899999999999 799999999999999999999875 444554411 357999985
Q ss_pred ccchh
Q 004697 720 VAEQV 724 (736)
Q Consensus 720 ~~~ev 724 (736)
+.++.
T Consensus 378 d~~~l 382 (419)
T cd03806 378 TAEEY 382 (419)
T ss_pred CHHHH
Confidence 55554
No 64
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.47 E-value=0.00063 Score=81.43 Aligned_cols=128 Identities=17% Similarity=0.215 Sum_probs=94.8
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
..+.++++++.|+.++|++++ ++..+.++.+ . .| ...++|.|.+. +.. .+.++++..
T Consensus 514 ~~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~~--~-~p-------~~~LvIvG~G~--~~~------~L~~l~~~l---- 570 (694)
T PRK15179 514 SDARFTVGTVMRVDDNKRPFL-WVEAAQRFAA--S-HP-------KVRFIMVGGGP--LLE------SVREFAQRL---- 570 (694)
T ss_pred CCCCeEEEEEEeCCccCCHHH-HHHHHHHHHH--H-Cc-------CeEEEEEccCc--chH------HHHHHHHHc----
Confidence 345788999999999999999 8888877754 3 22 47899999763 222 233333322
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
.+.+ +|.| .+|.-.+. .++.+||++..+|+ +|..|..=+-+|..|.+.|+|..|..-|+.++ ..|||++..
T Consensus 571 gL~~--~V~f-lG~~~dv~-~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d--g~~GlLv~~ 641 (694)
T PRK15179 571 GMGE--RILF-TGLSRRVG-YWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE--GVTGLTLPA 641 (694)
T ss_pred CCCC--cEEE-cCCcchHH-HHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccC--CCCEEEeCC
Confidence 2345 4555 45654444 67899999999998 99999999999999999999988877776654 368999963
No 65
>PLN02949 transferase, transferring glycosyl groups
Probab=97.44 E-value=0.00054 Score=78.39 Aligned_cols=143 Identities=17% Similarity=0.170 Sum_probs=99.1
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCC-CCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~-P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
+..+++++.||...|+.++ ++..+.++.+-. +. ...+..++++|.+. +.+..- .+.+.++++ +..
T Consensus 267 ~~~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~---~~---~~~~~~LvIvG~~~~~~~~~~---~~eL~~la~----~l~ 332 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHAL-QLEAFALALEKL---DA---DVPRPKLQFVGSCRNKEDEER---LQKLKDRAK----ELG 332 (463)
T ss_pred CCCEEEEEEeeeccCCHHH-HHHHHHHHHHhc---cc---cCCCcEEEEEeCCCCcccHHH---HHHHHHHHH----HcC
Confidence 4467788999999999999 999988876411 10 01246777777653 334331 122333333 223
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecccc-chhhh-hhcCCccEEEecc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA-NVEIR-QEIGEENFFLFGA 719 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa-~vEi~-e~~g~~n~f~FG~ 719 (736)
+.+ +|.|+.+-.-+--..++..||+.+.+|. .|.-|..-+-+|..|.++|++-.|- ..|+. ++.++.+||++.
T Consensus 333 L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~- 407 (463)
T PLN02949 333 LDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT- 407 (463)
T ss_pred CCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC-
Confidence 466 7999988765666668899999999998 8999999999999999999998763 33553 334457899985
Q ss_pred ccchh
Q 004697 720 VAEQV 724 (736)
Q Consensus 720 ~~~ev 724 (736)
++++.
T Consensus 408 ~~~~l 412 (463)
T PLN02949 408 TVEEY 412 (463)
T ss_pred CHHHH
Confidence 54443
No 66
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.40 E-value=0.0008 Score=70.38 Aligned_cols=126 Identities=16% Similarity=0.078 Sum_probs=96.7
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
.+.+.++++.|+..+|+.++ ++..+..+.+ . .+++++.|.....+..-+.. .
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~--~----------~~~l~i~G~~~~~~~~~~~~-------~-------- 240 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDL-LLEAFKRLPR--G----------DIELVIVGNGLELEEESYEL-------E-------- 240 (359)
T ss_pred CCceEEEEEecCccccCHHH-HHHHHHHHHh--c----------CcEEEEEcCchhhhHHHHhh-------c--------
Confidence 45677889999999999998 8777766533 1 57899999887766552221 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
... +|.|+..++-+....++..||+...+|+ ..|.+|++-+-+|..|.+.|+|-.|..-|+.+. ..+||+|...
T Consensus 241 ~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~-~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~--~~~g~~~~~~ 314 (359)
T cd03823 241 GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVRD--GVNGLLFPPG 314 (359)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcCc-ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcC--CCcEEEECCC
Confidence 133 6888888877777889999999999986 248899999999999999999988877766554 2589999765
No 67
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.39 E-value=0.00032 Score=75.43 Aligned_cols=120 Identities=18% Similarity=0.204 Sum_probs=90.8
Q ss_pred eeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 004697 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (736)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~ 644 (736)
.+++++.|+..+|+++. ++..+.++ |+.+++.|.+... .. ++. ...+
T Consensus 196 ~~il~~G~~~~~K~~~~-li~a~~~~---------------~~~l~ivG~g~~~----~~-l~~------------~~~~ 242 (351)
T cd03804 196 DYYLSVGRLVPYKRIDL-AIEAFNKL---------------GKRLVVIGDGPEL----DR-LRA------------KAGP 242 (351)
T ss_pred CEEEEEEcCccccChHH-HHHHHHHC---------------CCcEEEEECChhH----HH-HHh------------hcCC
Confidence 35779999999999998 76654321 4578899976431 11 111 1134
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEec-cccch
Q 004697 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG-AVAEQ 723 (736)
Q Consensus 645 ~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG-~~~~e 723 (736)
+|.|+..-+-+-...++.+||+.+.+|+ |..|++-+-+|..|.+.|++..|...|+.++ .++|+++. .+.++
T Consensus 243 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~--~~~G~~~~~~~~~~ 315 (351)
T cd03804 243 --NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVID--GVTGILFEEQTVES 315 (351)
T ss_pred --CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeC--CCCEEEeCCCCHHH
Confidence 6999998887778889999999999987 8999999999999999999999888776553 36899995 34444
Q ss_pred h
Q 004697 724 V 724 (736)
Q Consensus 724 v 724 (736)
+
T Consensus 316 l 316 (351)
T cd03804 316 L 316 (351)
T ss_pred H
Confidence 3
No 68
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=97.35 E-value=0.0005 Score=72.46 Aligned_cols=128 Identities=13% Similarity=0.048 Sum_probs=90.7
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~ 643 (736)
...++++.|+.+.|++++ ++.... . ....+++.|.+.......+ .+..... +.
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~-li~~~~------~---------~~~~l~i~G~~~~~~~~~~----~~~~~~~-------~~ 223 (335)
T cd03802 171 GDYLLFLGRISPEKGPHL-AIRAAR------R---------AGIPLKLAGPVSDPDYFYR----EIAPELL-------DG 223 (335)
T ss_pred CCEEEEEEeeccccCHHH-HHHHHH------h---------cCCeEEEEeCCCCHHHHHH----HHHHhcc-------cC
Confidence 346789999999999998 655421 1 1467999998764433211 1111110 24
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccch
Q 004697 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQ 723 (736)
Q Consensus 644 ~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~e 723 (736)
+ +|.|+..-+-.-...+++++|+.+++|+ ..|.+|++-+-||..|.+.|+|-.|...|+.+. ..|||++.. .++
T Consensus 224 ~--~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~--~~~g~l~~~-~~~ 297 (335)
T cd03802 224 P--DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVED--GVTGFLVDS-VEE 297 (335)
T ss_pred C--cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeC--CCcEEEeCC-HHH
Confidence 4 6888876655555678899999999987 249999999999999999999988888766653 259999976 444
Q ss_pred h
Q 004697 724 V 724 (736)
Q Consensus 724 v 724 (736)
+
T Consensus 298 l 298 (335)
T cd03802 298 L 298 (335)
T ss_pred H
Confidence 4
No 69
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.35 E-value=0.0047 Score=74.52 Aligned_cols=134 Identities=11% Similarity=0.144 Sum_probs=89.4
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCC-CCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~-P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
+..+++.|.|+...|+... ++..++++.+ . .|..+ ..+++|+.|-+. .+-..-.++-+.+.+++..||..-.
T Consensus 264 ~~~~il~VgRl~~~Kgi~~-~l~A~~~ll~--~-~p~~~---~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~ 336 (726)
T PRK14501 264 GRKIILSIDRLDYTKGIPR-RLLAFERFLE--K-NPEWR---GKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFG 336 (726)
T ss_pred CCEEEEEecCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcC
Confidence 5668899999999999999 9999999865 4 44321 235666655321 1112223455667677766652211
Q ss_pred CCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcchhhhhhc-----CceeEEeccccchhh
Q 004697 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN-----GCLIIGTLDGANVEI 705 (736)
Q Consensus 642 ~~~~lkVvFlen-Y~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lN-----Gal~i~tlDGa~vEi 705 (736)
..+...|+++.. .+-+---.++++||+.+.+|. .|.=|..-+-+|.- |.+.+|+..|+-.|+
T Consensus 337 ~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l 404 (726)
T PRK14501 337 TVDWTPIHYFYRSLPFEELVALYRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL 404 (726)
T ss_pred CCCcceEEEEeCCCCHHHHHHHHHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchhHHh
Confidence 111223665554 444555568999999999999 78878877777777 779999988877654
No 70
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.32 E-value=0.0033 Score=76.63 Aligned_cols=272 Identities=15% Similarity=0.174 Sum_probs=152.2
Q ss_pred ceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHH
Q 004697 333 KVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFI 412 (736)
Q Consensus 333 ~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~ 412 (736)
-++|=+||-|=-++ |.++|... -+.++.|.-|+|-| ...+=+.||..-+|+..+-
T Consensus 148 ~d~vWvhDYhL~ll-p~~lR~~~-------------~~~~igfFlHiPFP-------s~e~fr~lp~r~~il~gll---- 202 (797)
T PLN03063 148 GDVVWCHDYHLMFL-PQYLKEYN-------------NKMKVGWFLHTPFP-------SSEIYKTLPSRSELLRAVL---- 202 (797)
T ss_pred CCEEEEecchhhhH-HHHHHHhC-------------CCCcEEEEecCCCC-------CHHHHhhCCCHHHHHHHHh----
Confidence 36788999998777 99999863 46789999999955 3334467887777766653
Q ss_pred HHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccc
Q 004697 413 AMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRR 492 (736)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rr 492 (736)
+ -.+|.. ...+.+.-=+..|..+=|++.....+. +.+ -..++.-+-|||++.+
T Consensus 203 -------~--------aDligF----~t~~y~r~Fl~~~~r~l~~~~~~~~i~----~~g----r~~~I~viP~GID~~~ 255 (797)
T PLN03063 203 -------T--------ADLIGF----HTYDFARHFLSACTRILGVEGTHEGVV----DQG----KVTRVAVFPIGIDPER 255 (797)
T ss_pred -------c--------CCEEEe----CCHHHHHHHHHHHHHHhCccccCCceE----ECC----eEEEEEEEecccCHHH
Confidence 1 111211 111222111222333333332211110 000 0224566778988776
Q ss_pred cccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccc
Q 004697 493 WLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR 572 (736)
Q Consensus 493 Wl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR 572 (736)
+. +. ...++. +.. +..+++..+ +..++..|.|
T Consensus 256 f~----~~---------------------------~~~~~~-------~~~-----~~~lr~~~~-----~~~lIl~VgR 287 (797)
T PLN03063 256 FI----NT---------------------------CELPEV-------KQH-----MKELKRFFA-----GRKVILGVDR 287 (797)
T ss_pred HH----HH---------------------------hcChhH-------HHH-----HHHHHHhcC-----CCeEEEEecc
Confidence 62 11 111111 111 011222322 3567889999
Q ss_pred cccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCCcCCCCcceEEEE
Q 004697 573 IHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFV 651 (736)
Q Consensus 573 ~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y-~~aK~iIk~I~~la~~in~dp~~~~~lkVvFl 651 (736)
++.-|+..+ +|...+++++ . .|..+ ..+++|..+-..-++ ..-.++-+.+.+++..+|..-...+..-|+++
T Consensus 288 Ld~~KGi~~-lL~Afe~lL~--~-~P~~~---~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l 360 (797)
T PLN03063 288 LDMIKGIPQ-KYLAFEKFLE--E-NPEWR---DKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHL 360 (797)
T ss_pred cccccCHHH-HHHHHHHHHH--h-Ccccc---CcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEe
Confidence 999999999 9999999865 4 45421 135555333222122 12234566666776666532111122336666
Q ss_pred cC-CChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCc-----eeEEeccccchhhhhhcCCccEEEec
Q 004697 652 PN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC-----LIIGTLDGANVEIRQEIGEENFFLFG 718 (736)
Q Consensus 652 en-Y~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGa-----l~i~tlDGa~vEi~e~~g~~n~f~FG 718 (736)
.. .+-+---.++.+||+++-+|. .|.=|+--+-+|.-|. +.+|...|+-.+ .| .+++++.
T Consensus 361 ~~~v~~~el~aly~~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~----l~-~~allVn 426 (797)
T PLN03063 361 DCSVDFNYLCALYAITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS----LG-AGALLVN 426 (797)
T ss_pred cCCCCHHHHHHHHHhCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcCchhh----hc-CCeEEEC
Confidence 54 233344468899999999999 7877777777777764 677777775532 22 3566664
No 71
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.31 E-value=0.0011 Score=69.34 Aligned_cols=133 Identities=12% Similarity=0.096 Sum_probs=95.1
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
+++.+.++++.|+..+|+..+ ++..+.++.+. .+.++++.|.+...... .+++.. .
T Consensus 217 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~l~~~-----------~~~~l~i~G~~~~~~~~----~~~~~~--------~ 272 (394)
T cd03794 217 LDDKFVVLYAGNIGRAQGLDT-LLEAAALLKDR-----------PDIRFLIVGDGPEKEEL----KELAKA--------L 272 (394)
T ss_pred CCCcEEEEEecCcccccCHHH-HHHHHHHHhhc-----------CCeEEEEeCCcccHHHH----HHHHHH--------c
Confidence 356789999999999999998 88777665431 26789999976543221 111111 1
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCC-Cc----chhhhhhcCceeEEeccccchhhhhhcCCccEE
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEAS-GT----SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFF 715 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EAS-GT----s~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f 715 (736)
..+ .|.|+...+-+-...++..||+...+|. .|.. |. .-+-+|..|.+.|+|-.|..-|+.... ++|+
T Consensus 273 ~~~---~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~--~~g~ 345 (394)
T cd03794 273 GLD---NVTFLGRVPKEELPELLAAADVGLVPLK--PGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEA--GAGL 345 (394)
T ss_pred CCC---cEEEeCCCChHHHHHHHHhhCeeEEecc--CcccccccCchHHHHHHHCCCcEEEecCCCchhhhccC--Ccce
Confidence 112 5889887666777788899999999999 5554 33 347899999999999999887766542 7889
Q ss_pred Eecc-ccchh
Q 004697 716 LFGA-VAEQV 724 (736)
Q Consensus 716 ~FG~-~~~ev 724 (736)
+|.. +.+++
T Consensus 346 ~~~~~~~~~l 355 (394)
T cd03794 346 VVPPGDPEAL 355 (394)
T ss_pred EeCCCCHHHH
Confidence 8875 44444
No 72
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.09 E-value=0.0019 Score=74.64 Aligned_cols=122 Identities=19% Similarity=0.136 Sum_probs=89.5
Q ss_pred eeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 004697 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (736)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~ 644 (736)
..++++.|+.+.|+.+. ++..+.++.+ . .| ++++++.|.+.. . . .+.++++.. .+.+
T Consensus 320 ~~il~vGrl~~~Kg~~~-li~A~~~l~~--~-~p-------~~~l~i~G~G~~---~-~----~l~~~i~~~----~l~~ 376 (500)
T TIGR02918 320 FSIITASRLAKEKHIDW-LVKAVVKAKK--S-VP-------ELTFDIYGEGGE---K-Q----KLQKIINEN----QAQD 376 (500)
T ss_pred eEEEEEeccccccCHHH-HHHHHHHHHh--h-CC-------CeEEEEEECchh---H-H----HHHHHHHHc----CCCC
Confidence 46789999999999999 8888877754 2 22 578888887642 1 1 233333221 1245
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccc-cchhhhhhcCCccEEEec
Q 004697 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFG 718 (736)
Q Consensus 645 ~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDG-a~vEi~e~~g~~n~f~FG 718 (736)
+|.|+. + +.++ .+++.||++..+|+ .|+.|.+-|-||..|.+.|+|-.| ...|+.++ +.|||++.
T Consensus 377 --~V~f~G-~-~~~~-~~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~--g~nG~lv~ 442 (500)
T TIGR02918 377 --YIHLKG-H-RNLS-EVYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED--NKNGYLIP 442 (500)
T ss_pred --eEEEcC-C-CCHH-HHHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccC--CCCEEEEe
Confidence 566665 5 3555 46799999999999 999999999999999999998754 66666654 47999996
No 73
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.07 E-value=0.0012 Score=71.40 Aligned_cols=125 Identities=22% Similarity=0.170 Sum_probs=89.0
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~ 643 (736)
...++++.|+...|+.+. ++.++.++.. . .| .+.+++.|.+...... -+++ + +..+.
T Consensus 204 ~~~i~~vgrl~~~K~~~~-li~a~~~l~~--~-~~-------~~~l~i~G~g~~~~~~----~~~~----~----~~~~~ 260 (372)
T cd04949 204 PHKIITVARLAPEKQLDQ-LIKAFAKVVK--Q-VP-------DATLDIYGYGDEEEKL----KELI----E----ELGLE 260 (372)
T ss_pred CCeEEEEEccCcccCHHH-HHHHHHHHHH--h-CC-------CcEEEEEEeCchHHHH----HHHH----H----HcCCc
Confidence 356789999999999999 8888888754 2 22 4688899987653222 1122 1 12234
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccc-cchhhhhhcCCccEEEecc
Q 004697 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 644 ~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDG-a~vEi~e~~g~~n~f~FG~ 719 (736)
+ .|.|. +|.-. ...++..||+.+.+|+ .|+.|.+-+-||..|.+.|++-.| ...|+.+. .+||+++..
T Consensus 261 ~--~v~~~-g~~~~-~~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~--~~~G~lv~~ 329 (372)
T cd04949 261 D--YVFLK-GYTRD-LDEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED--GENGYLVPK 329 (372)
T ss_pred c--eEEEc-CCCCC-HHHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc--CCCceEeCC
Confidence 4 45554 45444 4567888999999999 899999999999999999998755 34454432 479999974
No 74
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=96.99 E-value=0.0042 Score=69.51 Aligned_cols=135 Identities=20% Similarity=0.158 Sum_probs=92.7
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~ 642 (736)
+.+.++++.|+...||.++ ++..+.++.+ . .|+ ..+.+++.|.+... .. +.++++.. ..
T Consensus 229 ~~~~il~~Grl~~~Kg~~~-li~a~~~l~~--~-~p~-----~~l~~~iiG~g~~~----~~----l~~~~~~~----~~ 287 (407)
T cd04946 229 DTLRIVSCSYLVPVKRVDL-IIKALAALAK--A-RPS-----IKIKWTHIGGGPLE----DT----LKELAESK----PE 287 (407)
T ss_pred CCEEEEEeeccccccCHHH-HHHHHHHHHH--h-CCC-----ceEEEEEEeCchHH----HH----HHHHHHhc----CC
Confidence 3567899999999999998 8888887755 2 222 24667777765421 12 22222211 11
Q ss_pred CCcceEEEEcCCC-hhHHhhhc-ccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc-
Q 004697 643 NSYLKVVFVPNYN-VSVAELLI-PGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA- 719 (736)
Q Consensus 643 ~~~lkVvFlenY~-vslA~~iv-~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~- 719 (736)
.+ +|.|+--.+ -++.+.+- ..+|+..++|. .|+-|.+-|-||..|.+.|+|-.|...|+.++ .+||+++..
T Consensus 288 ~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~--~~~G~l~~~~ 361 (407)
T cd04946 288 NI--SVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGLPVSIMEAMSFGIPVIATNVGGTPEIVDN--GGNGLLLSKD 361 (407)
T ss_pred Cc--eEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccccHHHHHHHHcCCCEEeCCCCCcHHHhcC--CCcEEEeCCC
Confidence 34 677765443 34555544 35899999998 99999999999999999999999988776654 359999964
Q ss_pred -ccchh
Q 004697 720 -VAEQV 724 (736)
Q Consensus 720 -~~~ev 724 (736)
+.+++
T Consensus 362 ~~~~~l 367 (407)
T cd04946 362 PTPNEL 367 (407)
T ss_pred CCHHHH
Confidence 44444
No 75
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=96.96 E-value=0.0024 Score=65.84 Aligned_cols=128 Identities=15% Similarity=0.040 Sum_probs=88.6
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
.+....+++.|+...|+.+. ++..+..+.+ . . .+.++++.|.+..... +....... .
T Consensus 176 ~~~~~i~~~g~~~~~K~~~~-l~~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~--------~~~~~~~~----~ 232 (348)
T cd03820 176 LKSKRILAVGRLVPQKGFDL-LIEAWAKIAK--K-H-------PDWKLRIVGDGPEREA--------LEALIKEL----G 232 (348)
T ss_pred CCCcEEEEEEeeccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEeCCCCHHH--------HHHHHHHc----C
Confidence 34567889999999999998 8887777654 2 1 2578999997654322 22222222 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccch-hhhhhcCCccEEEeccc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANV-EIRQEIGEENFFLFGAV 720 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~v-Ei~e~~g~~n~f~FG~~ 720 (736)
+.. +|.|... .+-...++..||+.+.+|+ .|..|++-+-+|..|.+.|++-.|... |+.+. ..+||+|...
T Consensus 233 ~~~--~v~~~g~--~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~--~~~g~~~~~~ 304 (348)
T cd03820 233 LED--RVILLGF--TKNIEEYYAKASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPTGPSEIIED--GVNGLLVPNG 304 (348)
T ss_pred CCC--eEEEcCC--cchHHHHHHhCCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCCchHhhhcc--CcceEEeCCC
Confidence 233 4555554 4455678889999999999 799999999999999999998655443 32222 2599999653
No 76
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.95 E-value=0.0028 Score=67.43 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=86.2
Q ss_pred eeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 004697 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (736)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~ 644 (736)
.+++++.|+.++|+.++ ++..+..+. . ..++++.|.+.......+.+.+ . . ...+
T Consensus 194 ~~i~~~G~~~~~Kg~~~-li~a~~~l~---~----------~~~l~ivG~~~~~~~~~~~~~~----~---~----~~~~ 248 (363)
T cd04955 194 RYYLLVGRIVPENNIDD-LIEAFSKSN---S----------GKKLVIVGNADHNTPYGKLLKE----K---A----AADP 248 (363)
T ss_pred cEEEEEecccccCCHHH-HHHHHHhhc---c----------CceEEEEcCCCCcchHHHHHHH----H---h----CCCC
Confidence 35679999999999998 776654331 1 4689999988554433332222 1 1 1234
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCc-cCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 645 ~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~-EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
+|.|+....-+-....+..||+...+|. . |..|.+-+-+|..|.+.|+|-.|...|+.+ ++++.|...
T Consensus 249 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~----~~g~~~~~~ 317 (363)
T cd04955 249 --RIIFVGPIYDQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFNREVLG----DKAIYFKVG 317 (363)
T ss_pred --cEEEccccChHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCccceeec----CCeeEecCc
Confidence 6777765444444466677899999988 6 999999999999999999999998776554 377777543
No 77
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.91 E-value=0.0029 Score=66.43 Aligned_cols=124 Identities=17% Similarity=0.156 Sum_probs=94.1
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
++...++++.|+...|+... ++..+.++..- .++.+++.|.+.-. . -++ .
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~-~i~~~~~l~~~-----------~~~~l~i~G~~~~~-~----~~~-----~-------- 244 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEA-LLDADLPLRRR-----------PPVRLVIVGDGPAR-A----RLE-----A-------- 244 (364)
T ss_pred CCCeEEEEEeccccccCHHH-HHHHHHHhhhc-----------CCceEEEEeCCchH-H----HHh-----c--------
Confidence 45678899999999999988 77776665331 25789999964321 1 111 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecccc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~ 721 (736)
..+ +|.|+.-.+.+-...++.+||+.+.+|. .|..|+.-+=+|.-|.+.|++-.|...|+.++ .++|++|....
T Consensus 245 ~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~--~~~g~~~~~~~ 318 (364)
T cd03814 245 RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTD--GENGLLVEPGD 318 (364)
T ss_pred cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcC--CcceEEcCCCC
Confidence 133 5888876677777789999999999998 79999999999999999999998888776654 37899986543
No 78
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=96.78 E-value=0.018 Score=66.60 Aligned_cols=140 Identities=14% Similarity=0.115 Sum_probs=95.4
Q ss_pred HHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHH
Q 004697 552 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVN 630 (736)
Q Consensus 552 i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y-~~aK~iIk~I~ 630 (736)
+++++| +..++..|-|+..-|+... .|...+++++ + +|..+ ..+++|..|.+.-.. ..-+++.+.|.
T Consensus 278 lr~~~~-----~~kiIl~VDRLDy~KGI~~-kl~Afe~~L~--~-~Pe~~---gkv~Lvqi~~psr~~v~~y~~l~~~v~ 345 (487)
T TIGR02398 278 IRSELA-----GVKLILSAERVDYTKGILE-KLNAYERLLE--R-RPELL---GKVTLVTACVPAASGMTIYDELQGQIE 345 (487)
T ss_pred HHHHcC-----CceEEEEecccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEeCCCcccchHHHHHHHHHH
Confidence 455666 3567789999999999999 9999999865 5 56542 246777666554222 33356778888
Q ss_pred HHHHHhcCCcCCCCcceEEEEcCC-ChhHHhhhcccccccccCCCCCccCCCcchhhhh-----hcCceeEEeccccchh
Q 004697 631 DVGEVVNTDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFS-----LNGCLIIGTLDGANVE 704 (736)
Q Consensus 631 ~la~~in~dp~~~~~lkVvFlenY-~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~-----lNGal~i~tlDGa~vE 704 (736)
+++..||..=...+.--|+++..+ .-+.--.++.+|||.+-+|. .|.=++--.-++ ..|.|.+|-..|+-.+
T Consensus 346 ~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~ 423 (487)
T TIGR02398 346 QAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVE 423 (487)
T ss_pred HHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCCCCCEEEeccccchhh
Confidence 888888754322233346666554 55566678999999999999 554444333332 3689999999997644
Q ss_pred h
Q 004697 705 I 705 (736)
Q Consensus 705 i 705 (736)
.
T Consensus 424 l 424 (487)
T TIGR02398 424 L 424 (487)
T ss_pred c
Confidence 3
No 79
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=96.64 E-value=0.0075 Score=65.78 Aligned_cols=129 Identities=11% Similarity=0.053 Sum_probs=84.5
Q ss_pred ceeeeeccccccc--hhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 564 SLFDIQVKRIHEY--KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 564 ~l~d~~vkR~~eY--KRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
...++++.|+..+ |+... ++..+. +++. +..+++.|.+. ..+. +.+.++.. .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~-l~~a~~---~~~~----------~~~l~ivG~g~-~~~~-------l~~~~~~~----~ 233 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKE-LFDGLS---QTTG----------EWQLHIIGDGS-DFEK-------CKAYSREL----G 233 (359)
T ss_pred CcEEEEEEEEecccCcCHHH-HHHHHH---hhCC----------CeEEEEEeCCc-cHHH-------HHHHHHHc----C
Confidence 4567888898755 65554 444333 2221 57899999873 2222 22333222 2
Q ss_pred CCCcceEEEEcCCCh--hHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEec-cccchhhhhhcCCccEEEec
Q 004697 642 VNSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL-DGANVEIRQEIGEENFFLFG 718 (736)
Q Consensus 642 ~~~~lkVvFlenY~v--slA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tl-DGa~vEi~e~~g~~n~f~FG 718 (736)
+++ +|.|+.--+. +.....+..||+...+|+ .|+.|.+-.=||..|.+.|+|- .|...|+.+. ..||+++.
T Consensus 234 l~~--~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~--~~~G~lv~ 307 (359)
T PRK09922 234 IEQ--RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP--GLNGELYT 307 (359)
T ss_pred CCC--eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccC--CCceEEEC
Confidence 345 6777754332 344556778999999998 8999999999999999999987 5666666554 36899995
Q ss_pred c-ccchh
Q 004697 719 A-VAEQV 724 (736)
Q Consensus 719 ~-~~~ev 724 (736)
. +.+++
T Consensus 308 ~~d~~~l 314 (359)
T PRK09922 308 PGNIDEF 314 (359)
T ss_pred CCCHHHH
Confidence 3 33443
No 80
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family.
Probab=96.45 E-value=0.0016 Score=61.37 Aligned_cols=43 Identities=19% Similarity=0.249 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHhhhcccCCCceEEEEEchhccccch
Q 004697 55 QAFFATAESVRDRLIQ--QWNETYHHFNKVDPKQTYYLSMEFLQGRTL 100 (736)
Q Consensus 55 ~~y~Ala~~vrd~~~~--~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L 100 (736)
..|.++....++++.. .|..+ ......+.|+||||||+++.+|
T Consensus 74 ~~~~~v~~~f~~Ym~~~~~W~~~---~~~~~~~~IAYFSmEfGlhesL 118 (118)
T PF11897_consen 74 ARYDRVYARFEEYMSQKPTWFQE---PGDTPNPPIAYFSMEFGLHESL 118 (118)
T ss_pred HHHHHHHHHHHHHHcCCCccccC---CCCCCCCCEEEEcccccccccC
Confidence 3445555555555543 35555 2233468999999999999876
No 81
>PLN02275 transferase, transferring glycosyl groups
Probab=96.40 E-value=0.02 Score=63.19 Aligned_cols=141 Identities=13% Similarity=0.103 Sum_probs=90.9
Q ss_pred eeeeeccccccchhccchhhHHHHHHHHHHhcCccc-------ccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 004697 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE-------RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 637 (736)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~-------~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in 637 (736)
.+++.+.|+...|+.+. ++..+..+.......... ......+.|++.|.+.- -+ ++-+++.+..
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~-~~---~l~~~~~~~~---- 284 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQ-KA---MYEEKISRLN---- 284 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCC-HH---HHHHHHHHcC----
Confidence 45668899999999998 888777664211000000 00012489999998842 22 2222222221
Q ss_pred CCcCCCCcceEEEEcCC-ChhHHhhhcccccccccCCCCC-ccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEE
Q 004697 638 TDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFF 715 (736)
Q Consensus 638 ~dp~~~~~lkVvFlenY-~vslA~~iv~gaDv~l~~s~~~-~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f 715 (736)
+. .|+|+..| .-+--..++++||++..++... .|..|+.-+-+|.-|.+.|+|..|..-|+.++ ++|||
T Consensus 285 ----l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~--g~~G~ 355 (371)
T PLN02275 285 ----LR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD--GKNGL 355 (371)
T ss_pred ----CC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC--CCCeE
Confidence 23 38887764 4455567899999998643211 26677788899999999999999988777665 47999
Q ss_pred Eeccccchh
Q 004697 716 LFGAVAEQV 724 (736)
Q Consensus 716 ~FG~~~~ev 724 (736)
+|. +.+++
T Consensus 356 lv~-~~~~l 363 (371)
T PLN02275 356 LFS-SSSEL 363 (371)
T ss_pred EEC-CHHHH
Confidence 997 34444
No 82
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.36 E-value=0.0096 Score=70.85 Aligned_cols=129 Identities=12% Similarity=0.042 Sum_probs=89.2
Q ss_pred HhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~ 634 (736)
+.|+..+|.. ..++.|++..|+.+. ++..+..+.. . . ..+.+++.|.+. .-. .+...+.
T Consensus 539 ~lgi~~~~kg--iLfVGRLa~EKGld~-LLeAla~L~~--~-~-------pnvrLvIVGDGP-~re-------eLe~la~ 597 (794)
T PLN02501 539 ELGQQAFSKG--AYFLGKMVWAKGYRE-LIDLLAKHKN--E-L-------DGFNLDVFGNGE-DAH-------EVQRAAK 597 (794)
T ss_pred hcCCccccCc--eEEEEcccccCCHHH-HHHHHHHHHh--h-C-------CCeEEEEEcCCc-cHH-------HHHHHHH
Confidence 3455433332 457789999999998 8877766532 2 1 147899999874 211 2233332
Q ss_pred HhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccE
Q 004697 635 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENF 714 (736)
Q Consensus 635 ~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~ 714 (736)
.. -+.|.|+.. ...+..+++++||+.++|+ .|.-|+.-+-||..|.+.|+|-.|.+..+. +..|+
T Consensus 598 eL--------gL~V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~e~V~---~g~nG 662 (794)
T PLN02501 598 RL--------DLNLNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSNEFFR---SFPNC 662 (794)
T ss_pred Hc--------CCEEEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCCceEe---ecCCe
Confidence 11 125777643 4555678999999999999 999999999999999999999888653322 23788
Q ss_pred EEecc
Q 004697 715 FLFGA 719 (736)
Q Consensus 715 f~FG~ 719 (736)
+++++
T Consensus 663 ll~~D 667 (794)
T PLN02501 663 LTYKT 667 (794)
T ss_pred EecCC
Confidence 88854
No 83
>PLN02846 digalactosyldiacylglycerol synthase
Probab=96.26 E-value=0.015 Score=66.72 Aligned_cols=121 Identities=16% Similarity=0.097 Sum_probs=88.8
Q ss_pred eeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 004697 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (736)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~ 644 (736)
+..+++.|++..|+... ++..+.++.+ . . ....+++.|.+. .-.. +.+.+...+
T Consensus 229 ~~~l~vGRL~~eK~~~~-Li~a~~~l~~--~-~-------~~~~l~ivGdGp-~~~~-------L~~~a~~l~------- 282 (462)
T PLN02846 229 KGAYYIGKMVWSKGYKE-LLKLLHKHQK--E-L-------SGLEVDLYGSGE-DSDE-------VKAAAEKLE------- 282 (462)
T ss_pred eEEEEEecCcccCCHHH-HHHHHHHHHh--h-C-------CCeEEEEECCCc-cHHH-------HHHHHHhcC-------
Confidence 45779999999999999 8877766543 2 1 146799999983 3222 333443221
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 645 ~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
+.+.|+.++. ..+.+++++||+.++|+ .|.-|+.-+-||..|.+-|++-.|.+ |+..+ ..|++.+.+
T Consensus 283 -l~~~vf~G~~--~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~~~ 349 (462)
T PLN02846 283 -LDVRVYPGRD--HADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTYDD 349 (462)
T ss_pred -CcEEEECCCC--CHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEecCC
Confidence 2344566663 34569999999999999 99999999999999999999988875 65554 489999953
No 84
>PHA01630 putative group 1 glycosyl transferase
Probab=96.22 E-value=0.015 Score=63.85 Aligned_cols=116 Identities=12% Similarity=-0.000 Sum_probs=81.3
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~ 643 (736)
.++.++++|++++|+.++ ++..+.++.+ . . .+..+++.|.. +... + +. .+.
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~l~~--~-~-------~~~~llivG~~-~~~~---~---l~-----------~~~ 192 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHELQN--E-G-------YDFYFLIKSSN-MLDP---R---LF-----------GLN 192 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHHHHh--h-C-------CCEEEEEEeCc-ccch---h---hc-----------ccc
Confidence 457789999999999999 8888877643 2 1 15778888832 1111 1 10 012
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEe
Q 004697 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (736)
Q Consensus 644 ~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~F 717 (736)
+ ...++ .-+--..++++||++..+|+ .|+-|..-+-||..|.+.|+|-.|.+-|+.++ ++|||++
T Consensus 193 ~--~~~~v---~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv 257 (331)
T PHA01630 193 G--VKTPL---PDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWI 257 (331)
T ss_pred c--eeccC---CHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEe
Confidence 2 11112 22344567899999999999 79999999999999999999999987776553 3677776
No 85
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=95.57 E-value=0.034 Score=51.44 Aligned_cols=126 Identities=17% Similarity=0.139 Sum_probs=74.2
Q ss_pred CceeeeeccccccchhccchhhH-HHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILG-AIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~-~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
|.++++.+.+++.+|+... ++. ++.++.+ . . .+++++|.|...+ + ++.. .
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~l~~--~-~-------p~~~l~i~G~~~~------~-l~~~---~-------- 51 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALERLKE--K-H-------PDIELIIIGNGPD------E-LKRL---R-------- 51 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHHHHH--H-S-------TTEEEEEECESS-------H-HCCH---H--------
T ss_pred Ccccccccccccccccccc-hhhhHHHHHHH--H-C-------cCEEEEEEeCCHH------H-HHHh---c--------
Confidence 4688999999999999998 887 7777654 2 2 2589999999544 1 2222 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecccc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~ 721 (736)
.. +|.|.... -++ ..++++||+.+.++.. -|.+++.-+-+|..|.+.|++-.| .-++.+. .+.++.+..+.
T Consensus 52 -~~--~v~~~g~~-~e~-~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~~-~~~~~~~--~~~~~~~~~~~ 122 (135)
T PF13692_consen 52 -RP--NVRFHGFV-EEL-PEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDNG-AEGIVEE--DGCGVLVANDP 122 (135)
T ss_dssp -HC--TEEEE-S--HHH-HHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHHH-CHCHS-----SEEEE-TT-H
T ss_pred -CC--CEEEcCCH-HHH-HHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCcc-hhhheee--cCCeEEECCCH
Confidence 12 58888887 344 5557889999988752 346677888899999999998774 2223332 35666667777
Q ss_pred chhHH
Q 004697 722 EQVPK 726 (736)
Q Consensus 722 ~ev~~ 726 (736)
+++.+
T Consensus 123 ~~l~~ 127 (135)
T PF13692_consen 123 EELAE 127 (135)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77643
No 86
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.43 E-value=0.059 Score=59.69 Aligned_cols=131 Identities=8% Similarity=0.009 Sum_probs=82.8
Q ss_pred CCceeeeeccccccchhccchhhHHHHHH-HHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRY-KKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~-~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
++..+++++.|+..+|+.+. ++..+... ..++... .+.++++.|.+.. . .+.+++.
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~~~-------p~~~l~ivG~g~~---~------~~~~l~~------ 278 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRARR-------PAAEFYIVGAKPS---P------AVRALAA------ 278 (397)
T ss_pred CCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHHHC-------CCcEEEEECCCCh---H------HHHHhcc------
Confidence 45678899999999999987 66444332 2333211 2478999998642 1 1222321
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
.. +|.|...-+ .+ ..++++||+...+|+. .|..|+.-+-+|.-|.+.|+|-.|... + . .+.++|+++..+
T Consensus 279 --~~--~V~~~G~v~-~~-~~~~~~adv~v~Ps~~-~eG~~~~~lEAma~G~PVV~t~~~~~~-i-~-~~~~~g~lv~~~ 348 (397)
T TIGR03087 279 --LP--GVTVTGSVA-DV-RPYLAHAAVAVAPLRI-ARGIQNKVLEAMAMAKPVVASPEAAEG-I-D-ALPGAELLVAAD 348 (397)
T ss_pred --CC--CeEEeeecC-CH-HHHHHhCCEEEecccc-cCCcccHHHHHHHcCCCEEecCccccc-c-c-ccCCcceEeCCC
Confidence 12 365654332 34 4578999999999862 255555678899999999999765321 1 1 123578888767
Q ss_pred cchhH
Q 004697 721 AEQVP 725 (736)
Q Consensus 721 ~~ev~ 725 (736)
.+++.
T Consensus 349 ~~~la 353 (397)
T TIGR03087 349 PADFA 353 (397)
T ss_pred HHHHH
Confidence 66653
No 87
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=95.31 E-value=0.036 Score=61.17 Aligned_cols=128 Identities=16% Similarity=0.130 Sum_probs=99.9
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
-+.++++.+.|+---|+.|| ++.+|.+..+ . .| .+.|||+|-+--.+.. ++++ +++ .
T Consensus 193 ~~i~~ivv~sRLvyrKGiDl-l~~iIp~vc~--~-~p-------~vrfii~GDGPk~i~l-ee~l-------Ek~----~ 249 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDL-LLEIIPSVCD--K-HP-------EVRFIIIGDGPKRIDL-EEML-------EKL----F 249 (426)
T ss_pred CCeeEEEEEeeeeeccchHH-HHHHHHHHHh--c-CC-------CeeEEEecCCcccchH-HHHH-------HHh----h
Confidence 34589999999999999999 9999998876 2 22 4789999998665543 2222 222 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
..+ ||+++-.-.=+--+.++.--||++|+|. .||=|+.=.-||--|-..+||.-|-..|+-. ++.-.++++
T Consensus 250 l~~--rV~~lG~v~h~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVsTrVGGIpeVLP----~d~i~~~~~ 320 (426)
T KOG1111|consen 250 LQD--RVVMLGTVPHDRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVSTRVGGIPEVLP----EDMITLGEP 320 (426)
T ss_pred ccC--ceEEecccchHHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEEeecCCccccCC----ccceeccCC
Confidence 345 8999888777777778888899999999 9999999999999999999999998877665 333335555
No 88
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=93.76 E-value=0.48 Score=47.83 Aligned_cols=128 Identities=18% Similarity=0.165 Sum_probs=87.4
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~ 643 (736)
..+..++.|+.+.|+..+ ++..+..+.+.. ....+++.|.+... +. .+..+...... .
T Consensus 199 ~~~i~~~g~~~~~k~~~~-~i~~~~~~~~~~----------~~~~~~~~g~~~~~----~~---~~~~~~~~~~~----~ 256 (381)
T COG0438 199 KFVVLYVGRLDPEKGLDL-LIEAAAKLKKRG----------PDIKLVIVGDGPER----RE---ELEKLAKKLGL----E 256 (381)
T ss_pred ceEEEEeeccChhcCHHH-HHHHHHHhhhhc----------CCeEEEEEcCCCcc----HH---HHHHHHHHhCC----C
Confidence 478889999999999999 777766664411 12788899988876 11 22223322211 2
Q ss_pred CcceEEEEcCCC-hhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccc
Q 004697 644 SYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 644 ~~lkVvFlenY~-vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~ 720 (736)
+ .|.|+-.-. ..+.. ++..||+...+|. .|+-|..-+-+|..|.+.|++.-|...|+.... ++|+++...
T Consensus 257 ~--~v~~~g~~~~~~~~~-~~~~~~~~v~ps~--~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~--~~g~~~~~~ 327 (381)
T COG0438 257 D--NVKFLGYVPDEELAE-LLASADVFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDG--ETGLLVPPG 327 (381)
T ss_pred C--cEEEecccCHHHHHH-HHHhCCEEEeccc--cccchHHHHHHHhcCCcEEECCCCChHHHhcCC--CceEecCCC
Confidence 3 566643333 34555 7888899999999 599999989999999888888888776666543 257766554
No 89
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=93.66 E-value=0.42 Score=54.16 Aligned_cols=110 Identities=15% Similarity=0.254 Sum_probs=77.0
Q ss_pred cccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCch
Q 004697 440 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (736)
Q Consensus 440 ~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~ 519 (736)
+..|-..|...+|..++||++-+-+.. .++ +--|+-+.- ||...-.+.+ +
T Consensus 242 rYC~ERaa~h~AhVFTTVSeITa~EAe-HlL----kRKPD~itP--NGLNV~KFsA-----~------------------ 291 (692)
T KOG3742|consen 242 RYCLERAAAHTAHVFTTVSEITALEAE-HLL----KRKPDVITP--NGLNVKKFSA-----V------------------ 291 (692)
T ss_pred HHHHHHHhhhhhhhhhhHHHHHHHHHH-HHH----hcCCCeeCC--CCcceeehhH-----H------------------
Confidence 679999999999999999998766554 222 122443332 8876665521 1
Q ss_pred hHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcCCC-Cceeeeecccc-ccchhccchhhHHHHHHHHHHh
Q 004697 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG--VTIDP-NSLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKE 595 (736)
Q Consensus 520 ~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g--~~ldp-~~l~d~~vkR~-~eYKRq~Lnil~~i~r~~~i~~ 595 (736)
-+++..|..+|.+..+|||-++- +++|- +.++.-.+.|. -.-|++++ .+..+.||+-++.
T Consensus 292 ---------------HEFQNLHA~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDm-FiEsLaRLN~~Lk 355 (692)
T KOG3742|consen 292 ---------------HEFQNLHAQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADM-FIESLARLNYLLK 355 (692)
T ss_pred ---------------HHHHHHHHHHHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHH-HHHHHHHhHHHHe
Confidence 11567889999999999999873 23332 45666667776 34589999 9999999985544
No 90
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=91.42 E-value=3.7 Score=51.33 Aligned_cols=130 Identities=14% Similarity=0.183 Sum_probs=83.6
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecC----CCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA----FATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA----~P~y~~aK~iIk~I~~la~~in~d 639 (736)
.-+++-|-|+..-|+... .|...+++++ . +|..+ ..+++|=-.-. -|.| +++-+.|.+++..||..
T Consensus 363 ~kiIlgVDRLD~~KGI~~-kL~AfE~fL~--~-~Pe~r---~kVVLvQIa~psr~~v~eY---~~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 363 RKVMLGVDRLDMIKGIPQ-KILAFEKFLE--E-NPEWR---DKVVLLQIAVPTRTDVPEY---QKLTSQVHEIVGRINGR 432 (934)
T ss_pred ceEEEEeeccccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEcCCCCCCcHHH---HHHHHHHHHHHHHHhhh
Confidence 458889999999999988 8889998865 4 56542 12444422211 1333 34556677777778632
Q ss_pred cCCCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcchhhhhh-----cCceeEEeccccchhh
Q 004697 640 PEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSL-----NGCLIIGTLDGANVEI 705 (736)
Q Consensus 640 p~~~~~lkVvFlen-Y~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~l-----NGal~i~tlDGa~vEi 705 (736)
=-..+..=|.++.. +..+----++.+|||.+-+|. .|--++--+-+|. .|+|.+|-..|+--+.
T Consensus 433 fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L 502 (934)
T PLN03064 433 FGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL 502 (934)
T ss_pred ccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh
Confidence 22222233666544 333333457899999999999 6665665555554 4999999999977544
No 91
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=80.84 E-value=3.8 Score=45.25 Aligned_cols=125 Identities=13% Similarity=0.050 Sum_probs=74.2
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~ 642 (736)
+.+.++++.++.+. .++.++ ..+.+ . .| ...|+|.|.+.+..... .+. .
T Consensus 204 ~~~~i~y~G~l~~~--~d~~ll---~~la~--~-~p-------~~~~vliG~~~~~~~~~--------~~~-------~- 252 (373)
T cd04950 204 PRPVIGYYGAIAEW--LDLELL---EALAK--A-RP-------DWSFVLIGPVDVSIDPS--------ALL-------R- 252 (373)
T ss_pred CCCEEEEEeccccc--cCHHHH---HHHHH--H-CC-------CCEEEEECCCcCccChh--------Hhc-------c-
Confidence 45788999999883 333222 22222 2 22 46899999873332220 111 1
Q ss_pred CCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhh---hhhcCceeEEeccccchhhhhhcCCccEEEecc
Q 004697 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK---FSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 643 ~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MK---a~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~ 719 (736)
.. +|.|+.--.-+-....+.++|+.+.+++..--..+++.+| +|.-|.+.|+|--+..+ +.. +.+++-..
T Consensus 253 ~~--nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~--~~~~~~~~ 325 (373)
T cd04950 253 LP--NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYE--DEVVLIAD 325 (373)
T ss_pred CC--CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhc--CcEEEeCC
Confidence 12 4888875555566678899999999987542223455555 78889999988544333 322 24556666
Q ss_pred ccchhH
Q 004697 720 VAEQVP 725 (736)
Q Consensus 720 ~~~ev~ 725 (736)
+.+++.
T Consensus 326 d~~~~~ 331 (373)
T cd04950 326 DPEEFV 331 (373)
T ss_pred CHHHHH
Confidence 666653
No 92
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=80.38 E-value=5.6 Score=44.55 Aligned_cols=137 Identities=16% Similarity=0.078 Sum_probs=76.0
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHH--hcCC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEV--VNTD 639 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~--in~d 639 (736)
++..+++++++. -|...+ ++..+.++.+ . .| .+.+|++|. +|. ..+++.+++.+..-. .-..
T Consensus 231 ~~~~vil~~~~~--~~~~~~-ll~A~~~l~~--~-~~-------~~~liivG~-g~~--r~~~l~~~~~~~gl~~~~~~~ 294 (425)
T PRK05749 231 PNRPVWIAASTH--EGEEEL-VLDAHRALLK--Q-FP-------NLLLILVPR-HPE--RFKEVEELLKKAGLSYVRRSQ 294 (425)
T ss_pred CCCcEEEEeCCC--chHHHH-HHHHHHHHHH--h-CC-------CcEEEEcCC-Chh--hHHHHHHHHHhCCCcEEEccC
Confidence 345566778764 366666 6666665533 2 12 467888886 342 234455555443210 0000
Q ss_pred cCCCCcceEEEEcCCChhHHhhhccccccccc-CCCCCccCCCcchhhhhhcCceeEEecc-ccchhhhhhcCCccEEEe
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQH-ISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLF 717 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~-~s~~~~EASGTs~MKa~lNGal~i~tlD-Ga~vEi~e~~g~~n~f~F 717 (736)
...+..-..|++-+.. .--..++++||+... .|. .|..|.+-+-+|.-|.+.|++-. |-.-|+.+.+. ++|+++
T Consensus 295 ~~~~~~~~~v~l~~~~-~el~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~-~~g~~~ 370 (425)
T PRK05749 295 GEPPSADTDVLLGDTM-GELGLLYAIADIAFVGGSL--VKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLL-QAGAAI 370 (425)
T ss_pred CCCCCCCCcEEEEecH-HHHHHHHHhCCEEEECCCc--CCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHH-HCCCeE
Confidence 0000000134444433 334588899999554 565 57889999999999999998754 33445544432 345555
Q ss_pred c
Q 004697 718 G 718 (736)
Q Consensus 718 G 718 (736)
.
T Consensus 371 ~ 371 (425)
T PRK05749 371 Q 371 (425)
T ss_pred E
Confidence 4
No 93
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=79.24 E-value=81 Score=36.89 Aligned_cols=134 Identities=11% Similarity=0.022 Sum_probs=84.6
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCCcCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPEV 642 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y-~~aK~iIk~I~~la~~in~dp~~ 642 (736)
.-+++=|-|+.--|+... =|...+++++ . .|..+ ..+++|=-+-..-.+ ..=+++-+.|.+++..||..=--
T Consensus 255 ~~lilgVDRLDytKGi~~-rl~Afe~fL~--~-~Pe~~---gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~ 327 (474)
T PRK10117 255 VQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQ 327 (474)
T ss_pred CeEEEEecccccccCHHH-HHHHHHHHHH--h-Chhhc---CCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCC
Confidence 335567889999999888 7888888876 4 67654 234554332221111 22245677888888888755444
Q ss_pred CCcceEEEEcCCChhHHh--hhcccccccccCCCCC------ccCCCcchhhhhhcCceeEEeccccchhhhh
Q 004697 643 NSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAG------MEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (736)
Q Consensus 643 ~~~lkVvFlenY~vslA~--~iv~gaDv~l~~s~~~------~EASGTs~MKa~lNGal~i~tlDGa~vEi~e 707 (736)
.+..=|.++.. +++..+ -++.+|||-+=+|.+- +|-.-... ---.|+|.+|-..|+-.|..+
T Consensus 328 ~~w~Pv~y~~~-~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~--~~~~GvLILSefAGaA~~L~~ 397 (474)
T PRK10117 328 LGWTPLYYLNQ-HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD--PANPGVLVLSQFAGAANELTS 397 (474)
T ss_pred CCceeEEEecC-CCCHHHHHHHHHhccEEEecccccccccccchheeeec--CCCCccEEEecccchHHHhCC
Confidence 44444666654 445554 6799999999999851 22211110 013599999999998766543
No 94
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=77.45 E-value=11 Score=41.10 Aligned_cols=69 Identities=17% Similarity=0.057 Sum_probs=47.9
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecc-ccchhhhhhcCCccEEEeccccchhH
Q 004697 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGAVAEQVP 725 (736)
Q Consensus 647 kVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlD-Ga~vEi~e~~g~~n~f~FG~~~~ev~ 725 (736)
+|.|+......---.++..||+..-+ ||+..+-+|.-|.+.|.+.+ |...|+.+ .+++++.+.+.+++.
T Consensus 256 ~v~~~~~~~~~~~~~~l~~ad~vv~~-------Sg~~~~EA~a~g~PvI~~~~~~~~~e~~~---~g~~~lv~~d~~~i~ 325 (365)
T TIGR00236 256 RVHLIEPLEYLDFLNLAANSHLILTD-------SGGVQEEAPSLGKPVLVLRDTTERPETVE---AGTNKLVGTDKENIT 325 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEC-------ChhHHHHHHHcCCCEEECCCCCCChHHHh---cCceEEeCCCHHHHH
Confidence 58888755544444678999998643 47778889999999999755 55556554 245566776776663
No 95
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=72.90 E-value=22 Score=41.54 Aligned_cols=147 Identities=16% Similarity=0.110 Sum_probs=103.4
Q ss_pred CCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEec--CCCCCHHHHHHHHHHHHHHHHhcC
Q 004697 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK--AFATYTNAKRIVKLVNDVGEVVNT 638 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GK--A~P~y~~aK~iIk~I~~la~~in~ 638 (736)
.-.-.|+.-+-||..-|+++| +|.+..++..... +|+ +.-...+|+|+ -.+..-.=.+-++.+.++.+.++.
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~~----~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EPS----ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred cccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CCC----CCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 344678888899999999999 9998887764322 222 23456677773 345555566777777888876632
Q ss_pred CcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEec
Q 004697 639 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (736)
Q Consensus 639 dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG 718 (736)
..+ .|.|+.--+= ++...-++|.--..++|..|+=|.=-.-||..|-++|+|-.|-=+||..+ ..|||+..
T Consensus 344 ---~g~--~v~~~~s~~~--~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~--~~tG~l~d 414 (495)
T KOG0853|consen 344 ---LGQ--FVWFLPSTTR--VAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVH--GVTGLLID 414 (495)
T ss_pred ---cCc--eEEEecCCch--HHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEc--CCcceeeC
Confidence 123 4555555333 23344555665566666689999999999999999999999988888876 48999998
Q ss_pred cccc
Q 004697 719 AVAE 722 (736)
Q Consensus 719 ~~~~ 722 (736)
.+.+
T Consensus 415 p~~e 418 (495)
T KOG0853|consen 415 PGQE 418 (495)
T ss_pred CchH
Confidence 8544
No 96
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=71.58 E-value=1.3e+02 Score=35.12 Aligned_cols=131 Identities=15% Similarity=0.213 Sum_probs=73.0
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEec-CCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK-AFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GK-A~P~y~~aK~iIk~I~~la~~in~dp~~ 642 (736)
.-+++=+-|+..-|+..+ =|..++++++ + +|..+ ..+++|=-+- +-..-..-.++-+.|.+++..||..=-.
T Consensus 276 ~~ii~gvDrld~~kGi~~-kl~Afe~fL~--~-~P~~~---~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~ 348 (474)
T PF00982_consen 276 RKIIVGVDRLDYTKGIPE-KLRAFERFLE--R-YPEYR---GKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGT 348 (474)
T ss_dssp SEEEEEE--B-GGG-HHH-HHHHHHHHHH--H--GGGT---TTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-B
T ss_pred cEEEEEeccchhhcCHHH-HHHHHHHHHH--h-CcCcc---CcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhccc
Confidence 467788899999999998 8889999976 5 67754 2455553332 2223333456777888888888753222
Q ss_pred CCcceEEEEcCCChhHHh--hhcccccccccCCCCCccCCCcchh--hh-----hhcCceeEEeccccchhhh
Q 004697 643 NSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAGMEASGTSNM--KF-----SLNGCLIIGTLDGANVEIR 706 (736)
Q Consensus 643 ~~~lkVvFlenY~vslA~--~iv~gaDv~l~~s~~~~EASGTs~M--Ka-----~lNGal~i~tlDGa~vEi~ 706 (736)
.+.--|.++.. +++.++ -++..||+.+-+|.+ .|.+=+ -+ --.|+|.+|...|+-.+..
T Consensus 349 ~~~~PI~~~~~-~~~~~~~~aly~~aDv~lvTslr----DGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~ 416 (474)
T PF00982_consen 349 PDWTPIIYIYR-SLSFEELLALYRAADVALVTSLR----DGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLS 416 (474)
T ss_dssp TTB-SEEEE-S----HHHHHHHHHH-SEEEE--SS----BS--HHHHHHHHHS-TS--EEEEETTBGGGGT-T
T ss_pred CCceeEEEEec-CCCHHHHHHHHHhhhhEEecchh----hccCCcceEEEEEecCCCCceEeeccCCHHHHcC
Confidence 23334788776 455554 478999999999994 232211 00 0469999999999875544
No 97
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=58.95 E-value=47 Score=35.83 Aligned_cols=133 Identities=17% Similarity=0.186 Sum_probs=67.8
Q ss_pred HhCCcCCCCceeeeecccccc---chhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHE---YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 631 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~e---YKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~ 631 (736)
..|+ +++..+.++..|... .|+... ++..+.++ .. ..+++|+.| +|.... .+.+.+.+
T Consensus 192 ~~~~--~~~~~vlv~~~r~~~~~~~k~~~~-l~~al~~l---~~---------~~~~vi~~~--~~~~~~--~l~~~~~~ 252 (363)
T cd03786 192 LLGL--LPKKYILVTLHRVENVDDGEQLEE-ILEALAEL---AE---------EDVPVVFPN--HPRTRP--RIREAGLE 252 (363)
T ss_pred hccc--CCCCEEEEEeCCccccCChHHHHH-HHHHHHHH---Hh---------cCCEEEEEC--CCChHH--HHHHHHHh
Confidence 4454 345566777777664 577666 66665543 22 025666654 333322 22223322
Q ss_pred HHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCC
Q 004697 632 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGE 711 (736)
Q Consensus 632 la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~ 711 (736)
+. . -.+ +|.|+.--...--..++.+||+..-+|- |+ ..-+|..|.+.|.+-+.. |..+.+..
T Consensus 253 ~~----~---~~~--~v~~~~~~~~~~~~~l~~~ad~~v~~Sg------gi-~~Ea~~~g~PvI~~~~~~--~~~~~~~~ 314 (363)
T cd03786 253 FL----G---HHP--NVLLISPLGYLYFLLLLKNADLVLTDSG------GI-QEEASFLGVPVLNLRDRT--ERPETVES 314 (363)
T ss_pred hc----c---CCC--CEEEECCcCHHHHHHHHHcCcEEEEcCc------cH-HhhhhhcCCCEEeeCCCC--ccchhhhe
Confidence 22 0 023 4666531112234456899999997762 33 556777788887775432 22233322
Q ss_pred ccEEEeccccchh
Q 004697 712 ENFFLFGAVAEQV 724 (736)
Q Consensus 712 ~n~f~FG~~~~ev 724 (736)
+.++..+.+.+++
T Consensus 315 g~~~~~~~~~~~i 327 (363)
T cd03786 315 GTNVLVGTDPEAI 327 (363)
T ss_pred eeEEecCCCHHHH
Confidence 3444455444544
No 98
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=57.51 E-value=52 Score=35.20 Aligned_cols=51 Identities=10% Similarity=0.042 Sum_probs=35.9
Q ss_pred hhhcccccccccCCCCCccCCCc-chhhhhhcCceeEEecccc-------chhhhhhcCCccEEEecc
Q 004697 660 ELLIPGSELSQHISTAGMEASGT-SNMKFSLNGCLIIGTLDGA-------NVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 660 ~~iv~gaDv~l~~s~~~~EASGT-s~MKa~lNGal~i~tlDGa-------~vEi~e~~g~~n~f~FG~ 719 (736)
..++++||+.... ||+ .-+-+|..|.+.|+|..+. +.|+..+ .++|+++..
T Consensus 245 ~~~l~~ad~~v~~-------~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~--~~~G~~~~~ 303 (348)
T TIGR01133 245 AAAYAAADLVISR-------AGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED--LGAGLVIRQ 303 (348)
T ss_pred HHHHHhCCEEEEC-------CChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH--CCCEEEEec
Confidence 5789999998852 454 4558999999999986532 3344443 468888754
No 99
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=56.61 E-value=36 Score=37.20 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=60.8
Q ss_pred HhCCcCCCCcee--eeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLF--DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDV 632 (736)
Q Consensus 555 ~~g~~ldp~~l~--d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~l 632 (736)
++|++ ++.++ ..--.|..+.|+..--++..+..+.+ . .| ..++|+.|- +|.+.. ++.+++...
T Consensus 179 ~l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~--~-~~-------~~~~ii~~~-~~~~~~--~~~~~~~~~ 243 (380)
T PRK00025 179 RLGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQ--R-YP-------DLRFVLPLV-NPKRRE--QIEEALAEY 243 (380)
T ss_pred HcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH--h-CC-------CeEEEEecC-ChhhHH--HHHHHHhhc
Confidence 55653 44433 22346888877643225555555433 2 11 367888763 343332 222222111
Q ss_pred HHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEec
Q 004697 633 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 698 (736)
Q Consensus 633 a~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tl 698 (736)
. .+.|.++.+ . ...++++||+..-. |||+.+-+|..|.+.|.+.
T Consensus 244 ~-----------~~~v~~~~~---~-~~~~~~~aDl~v~~-------sG~~~lEa~a~G~PvI~~~ 287 (380)
T PRK00025 244 A-----------GLEVTLLDG---Q-KREAMAAADAALAA-------SGTVTLELALLKVPMVVGY 287 (380)
T ss_pred C-----------CCCeEEEcc---c-HHHHHHhCCEEEEC-------ccHHHHHHHHhCCCEEEEE
Confidence 0 123444443 2 35678999999874 5999999999999998873
No 100
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=54.84 E-value=5.2 Score=36.79 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=20.5
Q ss_pred CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCc
Q 004697 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVL 381 (736)
Q Consensus 331 ~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~ 381 (736)
.+|++||+|.++++++ ..++|.. .+..+++|.|+..
T Consensus 72 ~~~Dvv~~~~~~~~~~-~~~~~~~--------------~~~p~v~~~h~~~ 107 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLV-AALARRR--------------RGIPLVVTVHGTL 107 (160)
T ss_dssp ---SEEEEEHHHHHHH-HHHHHHH--------------HT--EEEE-SS-T
T ss_pred cCCeEEEecccchhHH-HHHHHHc--------------cCCcEEEEECCCc
Confidence 4788999999775555 4555422 4678899999744
No 101
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=48.28 E-value=22 Score=41.58 Aligned_cols=134 Identities=16% Similarity=0.140 Sum_probs=83.2
Q ss_pred eeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEe-cCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 004697 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGG-KAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (736)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~G-KA~P~y~~aK~iIk~I~~la~~in~dp~~~ 643 (736)
-+++=+-|+..-|+-.- =|...+|+++ + +|..+. .+++|=-+ ...+.-..=+.+-+.|..++..||..=-.-
T Consensus 283 kiivgvDRlDy~kGi~~-rl~Afe~lL~--~-~Pe~~~---kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~ 355 (486)
T COG0380 283 KLIVGVDRLDYSKGIPQ-RLLAFERLLE--E-YPEWRG---KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSL 355 (486)
T ss_pred eEEEEehhcccccCcHH-HHHHHHHHHH--h-ChhhhC---ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 34455678877777665 6677788765 5 676642 34444333 333333333678888888888887533333
Q ss_pred CcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcchhh----h---hhcCceeEEeccccchhhhhhc
Q 004697 644 SYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMK----F---SLNGCLIIGTLDGANVEIRQEI 709 (736)
Q Consensus 644 ~~lkVvFlen-Y~vslA~~iv~gaDv~l~~s~~~~EASGTs~MK----a---~lNGal~i~tlDGa~vEi~e~~ 709 (736)
+..=|.|+.- .+-..---++..||+.+=+|.+. |.+-+. + .-+|+|.+|-..|+--|..+++
T Consensus 356 ~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrD----GMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~Al 425 (486)
T COG0380 356 SWTPVHYLHRDLDRNELLALYRAADVMLVTPLRD----GMNLVAKEYVAAQRDKPGVLILSEFAGAASELRDAL 425 (486)
T ss_pred CcceeEEEeccCCHHHHHHHHhhhceeeeccccc----cccHHHHHHHHhhcCCCCcEEEeccccchhhhccCE
Confidence 3333555532 33334444789999999999953 333221 1 2379999999999887776654
No 102
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=46.67 E-value=75 Score=35.62 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=64.2
Q ss_pred HhCCcCCCCceeeee--ccccccc-hhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQ--VKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 631 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~--vkR~~eY-KRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~ 631 (736)
++|+ +++.+++.. .+|.++- |.... ++..+.++.+ . .| ..++++.+-..++... +.+
T Consensus 184 ~lgl--~~~~~~Ilvl~GSR~aei~k~~~~-ll~a~~~l~~--~-~p-------~~~~vi~~~~~~~~~~-------~~~ 243 (385)
T TIGR00215 184 KLGI--DHNGETLALLPGSRGSEVEKLFPL-FLKAAQLLEQ--Q-EP-------DLRRVLPVVNFKRRLQ-------FEQ 243 (385)
T ss_pred HcCC--CCCCCEEEEECCCCHHHHHHhHHH-HHHHHHHHHH--h-CC-------CeEEEEEeCCchhHHH-------HHH
Confidence 5564 455555543 3799984 33334 5555555533 2 11 3566665433222221 222
Q ss_pred HHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccch
Q 004697 632 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANV 703 (736)
Q Consensus 632 la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~v 703 (736)
+.+.+.. .. +|.++.+ ++ ..++++||+..-.| ||+-+-+|..|.+.|.+..-.+.
T Consensus 244 ~~~~~~~----~~--~v~~~~~-~~---~~~l~aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~pl 298 (385)
T TIGR00215 244 IKAEYGP----DL--QLHLIDG-DA---RKAMFAADAALLAS-------GTAALEAALIKTPMVVGYRMKPL 298 (385)
T ss_pred HHHHhCC----CC--cEEEECc-hH---HHHHHhCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCHH
Confidence 2222211 22 5666654 33 35889999998666 99999999999999998655333
No 103
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=46.20 E-value=1.9e+02 Score=36.47 Aligned_cols=134 Identities=13% Similarity=0.118 Sum_probs=84.5
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC---HHHHHHHHHHHHHHHHhcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY---TNAKRIVKLVNDVGEVVNT 638 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y---~~aK~iIk~I~~la~~in~ 638 (736)
++.-+++=|-|+.--|+-.+ =|...+++++ + +|..+ ..+++|=- |.|.- ..=+++-+.|.+++..||.
T Consensus 337 ~~~~~ilgVDrlD~~KGi~~-kl~A~e~~L~--~-~P~~~---gkvvlvQi--a~psr~~~~~y~~~~~ev~~~v~rIN~ 407 (854)
T PLN02205 337 QDRIMLLGVDDMDIFKGISL-KLLAMEQLLM--Q-HPEWQ---GKVVLVQI--ANPARGKGKDVKEVQAETHSTVKRINE 407 (854)
T ss_pred CCCEEEEEccCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEE--ecCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 45667788999999999999 7778888866 5 67654 23444433 33332 2223456677788888875
Q ss_pred CcCCCCcceEEEEcCCChhHHh--hhcccccccccCCCCC------cc--CCCcc--hhh-------h-hhcCceeEEec
Q 004697 639 DPEVNSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAG------ME--ASGTS--NMK-------F-SLNGCLIIGTL 698 (736)
Q Consensus 639 dp~~~~~lkVvFlenY~vslA~--~iv~gaDv~l~~s~~~------~E--ASGTs--~MK-------a-~lNGal~i~tl 698 (736)
.=-..+.--|+|+.. .++..+ -++.+||+.+=+|.+- +| ||-.+ .|. . -..|+|.+|-.
T Consensus 408 ~fg~~~~~Pv~~~~~-~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEf 486 (854)
T PLN02205 408 TFGKPGYDPIVLIDA-PLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEF 486 (854)
T ss_pred hcCCCCCceEEEEec-CCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeec
Confidence 443344445777754 444444 4799999999999862 23 23221 111 0 14699999999
Q ss_pred cccchhh
Q 004697 699 DGANVEI 705 (736)
Q Consensus 699 DGa~vEi 705 (736)
.|+--+.
T Consensus 487 aGaa~~L 493 (854)
T PLN02205 487 IGCSPSL 493 (854)
T ss_pred cchhHHh
Confidence 9965544
No 104
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=43.79 E-value=1.1e+02 Score=36.23 Aligned_cols=137 Identities=9% Similarity=0.069 Sum_probs=87.9
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
|.+++=+.|-|+ +-|+.+- ++..+.++.. . +| ..++.|-|.+.+. ...+.+-+.|.++...++.+..
T Consensus 319 ~~~~I~v~idrL-~ek~~~~-~I~av~~~~~--~-~p-------~~~L~~~gy~~~~-~~~~~l~~~i~~~~~~~~~~~~ 385 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQ-ILQQLLQYIL--K-NP-------DYELKILTYNNDN-DITQLLEDILEQINEEYNQDKN 385 (519)
T ss_pred cceEEEEEcCCC-ChHHHHH-HHHHHHHHHh--h-CC-------CeEEEEEEecCch-hHHHHHHHHHHHHHhhhchhhh
Confidence 455555566699 9999998 8888888765 3 33 4688889998652 2244444555555433211111
Q ss_pred C------------------CCcceEEEEcCCCh--hHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecccc
Q 004697 642 V------------------NSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 701 (736)
Q Consensus 642 ~------------------~~~lkVvFlenY~v--slA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa 701 (736)
. ......|.+.+|-- .+. ..+.-+.+.+.+|+ .|.=| ++|-|+--|.+.| .=|.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~-~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI--nyg~ 459 (519)
T TIGR03713 386 FFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLI-SALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI--NKVE 459 (519)
T ss_pred ccccchhhhhhhcccchhhcccccEEEEEecCCHHHHH-HHHhhheEEEECCC--CCChH-HHHHHHHcCCCee--ecCC
Confidence 1 00014688888887 676 77788889888888 88888 8888888888877 2232
Q ss_pred chhhhhhcCCccEEEeccc
Q 004697 702 NVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 702 ~vEi~e~~g~~n~f~FG~~ 720 (736)
. |+.+ ...|||+.|+.
T Consensus 460 ~-~~V~--d~~NG~li~d~ 475 (519)
T TIGR03713 460 T-DYVE--HNKNGYIIDDI 475 (519)
T ss_pred c-eeeE--cCCCcEEeCCH
Confidence 1 1122 24799999443
No 105
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=39.89 E-value=1.4e+02 Score=33.16 Aligned_cols=111 Identities=10% Similarity=-0.058 Sum_probs=63.7
Q ss_pred HHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCe-EEEEEecCCCCCHHHHHHHHHHHHH
Q 004697 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPR-TIMIGGKAFATYTNAKRIVKLVNDV 632 (736)
Q Consensus 554 ~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~-q~If~GKA~P~y~~aK~iIk~I~~l 632 (736)
+++|+ +|+.+++.++.|....|+..- ++..+........ . ...+. .++++|+..+.+ +.+.+.
T Consensus 198 ~~~gl--~~~~~~il~~Gg~~g~~~~~~-li~~l~~~~~~~~-~-----~~~~~~~~vi~G~~~~~~-------~~L~~~ 261 (382)
T PLN02605 198 RELGM--DEDLPAVLLMGGGEGMGPLEE-TARALGDSLYDKN-L-----GKPIGQVVVICGRNKKLQ-------SKLESR 261 (382)
T ss_pred HHcCC--CCCCcEEEEECCCcccccHHH-HHHHHHHhhcccc-c-----cCCCceEEEEECCCHHHH-------HHHHhh
Confidence 35664 578899999999999888665 5444433211000 0 01134 467888752111 122222
Q ss_pred HHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEec
Q 004697 633 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 698 (736)
Q Consensus 633 a~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tl 698 (736)
+. .. +|.| .+|--.+. .++++||+....| .|..-+-+|.-|.+.|+|-
T Consensus 262 ~~--------~~--~v~~-~G~~~~~~-~l~~aaDv~V~~~------g~~ti~EAma~g~PvI~~~ 309 (382)
T PLN02605 262 DW--------KI--PVKV-RGFVTNME-EWMGACDCIITKA------GPGTIAEALIRGLPIILNG 309 (382)
T ss_pred cc--------cC--CeEE-EeccccHH-HHHHhCCEEEECC------CcchHHHHHHcCCCEEEec
Confidence 11 22 3333 33433444 5679999999533 3555688999999999986
No 106
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=39.30 E-value=99 Score=33.07 Aligned_cols=64 Identities=11% Similarity=0.019 Sum_probs=40.5
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecccc--------chhhhhhcCCccEEEec
Q 004697 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA--------NVEIRQEIGEENFFLFG 718 (736)
Q Consensus 647 kVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa--------~vEi~e~~g~~n~f~FG 718 (736)
+|.|+. |- +-...++++||+....| | |+.-+-+|..|.+.|++-.+. +.|...+ .++|+++.
T Consensus 236 ~v~~~g-~~-~~~~~~l~~ad~~v~~s--g----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~--~g~g~~v~ 305 (350)
T cd03785 236 NYEVFP-FI-DDMAAAYAAADLVISRA--G----ASTVAELAALGLPAILIPLPYAADDHQTANARALVK--AGAAVLIP 305 (350)
T ss_pred CeEEee-hh-hhHHHHHHhcCEEEECC--C----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh--CCCEEEEe
Confidence 455544 33 33446778999998533 1 344579999999999876543 2333333 36899998
Q ss_pred cc
Q 004697 719 AV 720 (736)
Q Consensus 719 ~~ 720 (736)
..
T Consensus 306 ~~ 307 (350)
T cd03785 306 QE 307 (350)
T ss_pred cC
Confidence 53
No 107
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=37.38 E-value=35 Score=31.78 Aligned_cols=40 Identities=28% Similarity=0.379 Sum_probs=23.2
Q ss_pred hhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCcccc
Q 004697 448 VVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRW 493 (736)
Q Consensus 448 i~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrW 493 (736)
...++.+-.||.--.+.+++ + .+-|+++.=|-|||+..++
T Consensus 137 ~~~~~~ii~vS~~~~~~l~~--~----~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 137 YKKADRIIAVSESTKDELIK--F----GIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HCCSSEEEESSHHHHHHHHH--H----T--SS-EEE----B-CCCH
T ss_pred HhcCCEEEEECHHHHHHHHH--h----CCcccCCEEEECCccHHHc
Confidence 45677788888887777764 3 2446889999999998654
No 108
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=37.18 E-value=59 Score=31.37 Aligned_cols=46 Identities=17% Similarity=0.043 Sum_probs=34.8
Q ss_pred CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccH
Q 004697 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 390 (736)
Q Consensus 331 ~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~ 390 (736)
.+|++||+|++.++...+ ++ .. ......+++|.|++.+.-...+..
T Consensus 50 ~~~D~i~~~~~~~~~~~~-~~-~~------------~~~~~~~i~~~h~~~~~~~~~~~~ 95 (229)
T cd01635 50 FKPDVVHAHGYYPAPLAL-LL-AA------------RLLGIPLVLTVHGVNRSLLEGVPL 95 (229)
T ss_pred cCCCEEEEcCCCcHHHHH-HH-HH------------hhCCCCEEEEEcCccHhhcccCcH
Confidence 478999999999998855 11 11 126788999999999988766654
No 109
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=35.46 E-value=77 Score=36.61 Aligned_cols=49 Identities=16% Similarity=0.116 Sum_probs=44.6
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEe
Q 004697 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 697 (736)
Q Consensus 647 kVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~t 697 (736)
.|+..++|.....+.++.-||+.+.||. .|.=|.+-|.|+-+|-+.+|-
T Consensus 329 nvvly~~~~~~~l~~ly~~~dlyLdin~--~e~~~~al~eA~~~G~pI~af 377 (438)
T TIGR02919 329 NVKLYPNITTQKIQELYQTCDIYLDINH--GNEILNAVRRAFEYNLLILGF 377 (438)
T ss_pred CcEEECCcChHHHHHHHHhccEEEEccc--cccHHHHHHHHHHcCCcEEEE
Confidence 4999999999777899999999999999 999999999999999976654
No 110
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=33.41 E-value=1.4e+02 Score=32.32 Aligned_cols=117 Identities=12% Similarity=0.009 Sum_probs=67.3
Q ss_pred CCCceeeeeccccccchhcc-chhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 561 DPNSLFDIQVKRIHEYKRQL-LNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 561 dp~~l~d~~vkR~~eYKRq~-Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (736)
+++..++.++.|+...|... + +...+..+ .. .|..+++.|.+.. +. +.+.+ + .
T Consensus 180 ~~~~~~i~~~gg~~~~~~~~~~-l~~a~~~~---~~---------~~~~~~~~G~g~~--~~---~~~~~----~-~--- 233 (357)
T PRK00726 180 REGKPTLLVVGGSQGARVLNEA-VPEALALL---PE---------ALQVIHQTGKGDL--EE---VRAAY----A-A--- 233 (357)
T ss_pred CCCCeEEEEECCcHhHHHHHHH-HHHHHHHh---hh---------CcEEEEEcCCCcH--HH---HHHHh----h-c---
Confidence 45667777888877666543 3 32444333 11 1556677787752 11 11111 1 1
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCC-cchhhhhhcCceeEEeccc--------cchhhhhhcC
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG-TSNMKFSLNGCLIIGTLDG--------ANVEIRQEIG 710 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASG-Ts~MKa~lNGal~i~tlDG--------a~vEi~e~~g 710 (736)
+ ++ |.+.+|- +--..++++||+.... || ..-+-+|.-|.+.|++..| ++.|...+
T Consensus 234 ---~--~~-v~~~g~~-~~~~~~~~~~d~~i~~-------~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-- 297 (357)
T PRK00726 234 ---G--IN-AEVVPFI-DDMAAAYAAADLVICR-------AGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-- 297 (357)
T ss_pred ---C--Cc-EEEeehH-hhHHHHHHhCCEEEEC-------CCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH--
Confidence 1 13 4455663 3445888999999853 34 4456899999999998754 12343433
Q ss_pred CccEEEecc
Q 004697 711 EENFFLFGA 719 (736)
Q Consensus 711 ~~n~f~FG~ 719 (736)
.++|++...
T Consensus 298 ~~~g~~~~~ 306 (357)
T PRK00726 298 AGAALLIPQ 306 (357)
T ss_pred CCCEEEEEc
Confidence 357888754
No 111
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=30.57 E-value=1.7e+02 Score=32.06 Aligned_cols=44 Identities=11% Similarity=0.085 Sum_probs=30.6
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEec
Q 004697 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 698 (736)
Q Consensus 647 kVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tl 698 (736)
+|.|+ +|--.+ ..++++||+.. + ++.|.+-+-+|..|.+.|++-
T Consensus 257 ~v~~~-g~~~~~-~~l~~~aD~~v--~----~~gg~t~~EA~a~g~PvI~~~ 300 (380)
T PRK13609 257 ALKVF-GYVENI-DELFRVTSCMI--T----KPGGITLSEAAALGVPVILYK 300 (380)
T ss_pred cEEEE-echhhH-HHHHHhccEEE--e----CCCchHHHHHHHhCCCEEECC
Confidence 46666 443333 46779999975 2 445666678999999988864
No 112
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]
Probab=30.40 E-value=4.9e+02 Score=30.50 Aligned_cols=136 Identities=16% Similarity=0.233 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHH
Q 004697 544 SKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAK 623 (736)
Q Consensus 544 nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK 623 (736)
.++.+++|+.+++++..... .|+.|+....+.+... + -..|+.+-.-||=.+--..=-
T Consensus 258 ~~q~~~e~l~~~L~L~~~~~-------------~~~~l~~W~~~~~~~d--~-------~~~~V~IalVGKYt~l~DsY~ 315 (585)
T KOG2387|consen 258 EEQGIVEYLNRRLGLSIISS-------------ERPMLDKWSNMAERYD--D-------LQVPVRIALVGKYTKLSDSYL 315 (585)
T ss_pred hhhhHHHHHHHHhCCCcccc-------------chhhHHHHHHHHHhhh--c-------ccCcEEEEEEeccccchHHHH
Confidence 35567888888988754322 2255655555444332 1 235899999999888766666
Q ss_pred HHHHHHHHHHHHhcCCcCCCCcceEEEEcCCCh------------hHHhhhcccccccccCCCCCccCCCcchhhhhh--
Q 004697 624 RIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNV------------SVAELLIPGSELSQHISTAGMEASGTSNMKFSL-- 689 (736)
Q Consensus 624 ~iIk~I~~la~~in~dp~~~~~lkVvFlenY~v------------slA~~iv~gaDv~l~~s~~~~EASGTs~MKa~l-- 689 (736)
.++|.+.+-|-.+ +.||.|.+++.=+. .-|=.++.+||=-+-|-- +-.-|++||..+.
T Consensus 316 Sv~KAL~Ha~~~~------~~kl~i~wi~s~dLE~~t~~e~~~~~~~aW~~l~~adGilvPGG--FG~RGveG~i~Aak~ 387 (585)
T KOG2387|consen 316 SVVKALEHAALAI------NRKLEIVWIDSSDLEPETEQEDPRKYHAAWQKLKSADGILVPGG--FGDRGVEGKILAAKW 387 (585)
T ss_pred HHHHHHHHHHHHh------cccceEEEEehhcccccccccChhHHHHHHHHhccCCeEEeCCc--ccccchhHHHHHHHH
Confidence 7888887777656 67889999876443 235566777887776654 8889999997664
Q ss_pred ---cCceeEEeccc---cchhhhhhc
Q 004697 690 ---NGCLIIGTLDG---ANVEIRQEI 709 (736)
Q Consensus 690 ---NGal~i~tlDG---a~vEi~e~~ 709 (736)
|+.+-+|..=| |+||.+..+
T Consensus 388 ARen~iP~LGiCLGmQ~AvIEfaRnv 413 (585)
T KOG2387|consen 388 ARENKIPFLGICLGMQLAVIEFARNV 413 (585)
T ss_pred HHhcCCCeEeeehhhhHHHHHHHHHh
Confidence 89999999999 999998776
No 113
>PF14407 Frankia_peptide: Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Probab=30.12 E-value=20 Score=30.32 Aligned_cols=41 Identities=22% Similarity=0.236 Sum_probs=34.7
Q ss_pred chhccccchhHHhhcCCcHHHHHHHHHHcCCChHHHHhhhc
Q 004697 92 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEK 132 (736)
Q Consensus 92 mEfl~Gr~L~nnl~nLg~~~~~~eaL~~lg~~l~~l~~~E~ 132 (736)
||.+|||.....=.-..+...-.+|.++.+++-|+|...|.
T Consensus 2 ~e~lIgrAv~D~~FRqqllad~~~A~~~Y~Lt~eeL~al~~ 42 (61)
T PF14407_consen 2 VERLIGRAVTDEAFRQQLLADPEEACKEYDLTPEELQALER 42 (61)
T ss_pred HHHHHHHHHcCHHHHHHHhcCHHHHHhhCCCCHHHHHHHHH
Confidence 78899999887766666677778899999999999999986
No 114
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=28.92 E-value=67 Score=29.56 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=24.7
Q ss_pred CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcC-ceEEEeecCC
Q 004697 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT-RTVAYTNHTV 380 (736)
Q Consensus 331 ~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~-~~~vfT~HT~ 380 (736)
.+|++||+|...|...+.-++..+ .+ ..+++|.|..
T Consensus 73 ~~~DvIh~h~~~~~~~~~~l~~~~--------------~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 73 EKPDVIHCHTPSPYGLFAMLAKKL--------------LKNKKVIYTVHGS 109 (139)
T ss_pred CCCCEEEEecCChHHHHHHHHHHH--------------cCCCCEEEEecCC
Confidence 358999999999853334444332 34 6889999954
No 115
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=28.83 E-value=45 Score=30.97 Aligned_cols=37 Identities=32% Similarity=0.353 Sum_probs=26.2
Q ss_pred CCceEEeeCCCc---ccccHHHHHHHHHHhcCCChHHHHhhcCc
Q 004697 331 PSKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTR 371 (736)
Q Consensus 331 ~~~~viHlND~H---palaipElmR~l~d~~gl~~d~A~~i~~~ 371 (736)
.+|+.|||..|+ +++++..+ +...+++.++|++.++.
T Consensus 81 ~~~vlVHC~~G~~Rs~~~~~~~l----~~~~~~~~~~a~~~vr~ 120 (139)
T cd00127 81 GGKVLVHCLAGVSRSATLVIAYL----MKTLGLSLREAYEFVKS 120 (139)
T ss_pred CCcEEEECCCCCchhHHHHHHHH----HHHcCCCHHHHHHHHHH
Confidence 468999999998 23443333 44558899999977665
No 116
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=28.71 E-value=25 Score=37.61 Aligned_cols=54 Identities=24% Similarity=0.372 Sum_probs=39.3
Q ss_pred CcHHHHHHHHHHcCCChHHHHhhhc--cccCCCCCcccchhhhHhhhh-ccCCCeeEEe
Q 004697 108 DIQNAYADALNNLGHVLEEIAEQEK--DAALGNGGLGRLASCFLDSMA-TLNLPAWGYG 163 (736)
Q Consensus 108 g~~~~~~eaL~~lg~~l~~l~~~E~--d~~lgnGGLGrLA~~~ldS~a-~l~~P~~g~G 163 (736)
.|...++++|++.|++++||-..=. =||++ +|| |.+..+.|.+| .+++|++|+.
T Consensus 32 ~L~~~i~~~l~~~~~~~~did~iavt~GPGsf-tgL-rvG~~~Ak~La~~~~~Pli~v~ 88 (268)
T PF00814_consen 32 NLPPLIEELLKEAGISLSDIDAIAVTRGPGSF-TGL-RVGLSFAKGLALALNIPLIGVS 88 (268)
T ss_dssp HHHHHHHHHHHHHTS-GGGESEEEEEEESS-H-HHH-HHHHHHHHHHHHHTT--EEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCcc-ccc-HHHHHHHHHHHHHhCCCeEeec
Confidence 3567899999999999998766533 34444 477 88889999988 4999999997
No 117
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=24.65 E-value=90 Score=28.86 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=27.1
Q ss_pred CceEEeeCCCc---ccccHHHHHHHHHHhcCCChHHHHhhcCc
Q 004697 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTR 371 (736)
Q Consensus 332 ~~~viHlND~H---palaipElmR~l~d~~gl~~d~A~~i~~~ 371 (736)
.++.|||.-|. |++++.. ||..++++.++|++.++.
T Consensus 74 ~~VlVHC~~G~~RS~~v~~ay----Lm~~~~~~~~~A~~~v~~ 112 (133)
T PF00782_consen 74 GKVLVHCKAGLSRSGAVAAAY----LMKKNGMSLEEAIEYVRS 112 (133)
T ss_dssp SEEEEEESSSSSHHHHHHHHH----HHHHHTSSHHHHHHHHHH
T ss_pred ceeEEEeCCCcccchHHHHHH----HHHHcCCCHHHHHHHHHH
Confidence 57899999998 5666444 455678999999977654
No 118
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=22.98 E-value=82 Score=29.45 Aligned_cols=38 Identities=29% Similarity=0.364 Sum_probs=26.9
Q ss_pred CCceEEeeCCCc---ccccHHHHHHHHHHhcCCChHHHHhhcCce
Q 004697 331 PSKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (736)
Q Consensus 331 ~~~~viHlND~H---palaipElmR~l~d~~gl~~d~A~~i~~~~ 372 (736)
.+++.|||+.|. +++++ -.+|...|++.++|++.++..
T Consensus 78 ~~~VlVHC~~G~~RS~~v~~----~yl~~~~~~~~~~A~~~v~~~ 118 (138)
T smart00195 78 GGKVLVHCQAGVSRSATLII----AYLMKYRNLSLNDAYDFVKDR 118 (138)
T ss_pred CCeEEEECCCCCchHHHHHH----HHHHHHhCCCHHHHHHHHHHH
Confidence 468999999986 23332 334556799999999877643
Done!