Query 004697
Match_columns 736
No_of_seqs 230 out of 1205
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 02:56:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004697.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004697hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 4E-221 1E-225 1894.1 53.1 699 27-731 39-773 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 1E-209 5E-214 1809.5 60.3 707 18-731 2-714 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 4E-208 1E-212 1792.2 53.7 688 27-734 5-692 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 2E-204 6E-209 1761.9 55.8 676 27-730 4-679 (796)
5 3vue_A GBSS-I, granule-bound s 100.0 1.7E-34 5.9E-39 328.7 16.4 371 245-719 75-451 (536)
6 3nb0_A Glycogen [starch] synth 99.8 3.5E-19 1.2E-23 205.8 17.3 309 302-718 162-574 (725)
7 1rzu_A Glycogen synthase 1; gl 99.5 1.7E-14 5.7E-19 158.9 5.5 290 331-724 129-430 (485)
8 2qzs_A Glycogen synthase; glyc 99.5 3.7E-14 1.3E-18 156.1 8.0 290 331-724 128-431 (485)
9 3fro_A GLGA glycogen synthase; 99.3 1.7E-11 5.9E-16 131.2 14.0 262 331-724 121-385 (439)
10 3s28_A Sucrose synthase 1; gly 98.9 8.5E-10 2.9E-14 131.4 5.6 144 555-719 563-714 (816)
11 1uqt_A Alpha, alpha-trehalose- 98.7 6.6E-08 2.2E-12 108.9 11.6 147 563-724 254-409 (482)
12 3okp_A GDP-mannose-dependent a 98.6 3.8E-07 1.3E-11 96.2 15.9 190 449-724 139-334 (394)
13 3c48_A Predicted glycosyltrans 98.6 9.4E-08 3.2E-12 103.1 11.2 200 447-724 181-381 (438)
14 2r60_A Glycosyl transferase, g 98.6 2.9E-07 1E-11 101.8 12.6 210 445-724 185-414 (499)
15 2jjm_A Glycosyl transferase, g 98.5 2E-07 6.9E-12 99.4 9.8 188 446-724 152-340 (394)
16 2bfw_A GLGA glycogen synthase; 98.3 1.7E-06 5.8E-11 83.3 10.1 137 554-724 29-170 (200)
17 2f9f_A First mannosyl transfer 98.3 2.1E-06 7.2E-11 82.3 8.9 137 557-724 16-152 (177)
18 2iw1_A Lipopolysaccharide core 98.2 5E-06 1.7E-10 87.1 10.3 190 450-724 136-327 (374)
19 2x6q_A Trehalose-synthase TRET 98.1 9E-06 3.1E-10 87.2 11.9 143 555-724 224-369 (416)
20 3oy2_A Glycosyltransferase B73 97.9 1.5E-05 5E-10 85.4 8.3 133 555-708 175-314 (413)
21 3t5t_A Putative glycosyltransf 97.7 0.00036 1.2E-08 78.9 15.3 143 563-724 280-428 (496)
22 2iuy_A Avigt4, glycosyltransfe 97.6 7.5E-05 2.6E-09 77.8 7.6 130 563-724 161-298 (342)
23 3qhp_A Type 1 capsular polysac 97.5 0.00027 9.1E-09 65.9 8.3 114 564-708 2-117 (166)
24 2gek_A Phosphatidylinositol ma 97.4 0.00017 6E-09 76.2 6.7 131 563-724 207-339 (406)
25 2x0d_A WSAF; GT4 family, trans 96.2 0.014 4.8E-07 63.8 9.9 128 563-724 240-369 (413)
26 3beo_A UDP-N-acetylglucosamine 95.6 0.024 8.1E-07 59.3 8.0 127 562-724 204-332 (375)
27 1vgv_A UDP-N-acetylglucosamine 95.4 0.039 1.3E-06 57.9 9.2 124 564-724 206-332 (384)
28 2hy7_A Glucuronosyltransferase 95.4 0.051 1.7E-06 58.8 10.1 111 565-724 223-342 (406)
29 2vsy_A XCC0866; transferase, g 95.1 0.042 1.4E-06 61.3 8.5 111 555-696 370-481 (568)
30 1v4v_A UDP-N-acetylglucosamine 90.1 0.9 3.1E-05 47.4 9.3 126 562-724 197-324 (376)
31 1f0k_A MURG, UDP-N-acetylgluco 88.2 0.66 2.3E-05 48.0 6.5 119 562-720 181-308 (364)
32 3dzc_A UDP-N-acetylglucosamine 61.2 24 0.00083 37.7 9.1 135 551-724 218-357 (396)
33 2xci_A KDO-transferase, 3-deox 57.9 27 0.00093 36.9 8.7 120 567-708 199-320 (374)
34 3ot5_A UDP-N-acetylglucosamine 53.6 32 0.0011 36.9 8.5 125 564-724 225-351 (403)
35 4hwg_A UDP-N-acetylglucosamine 50.8 26 0.00088 37.6 7.1 69 647-725 264-333 (385)
36 3q3e_A HMW1C-like glycosyltran 40.2 88 0.003 36.2 9.7 109 563-702 440-551 (631)
37 3u7q_B Nitrogenase molybdenum- 35.5 1.3E+02 0.0044 33.9 10.0 135 15-163 308-470 (523)
38 3ezz_A Dual specificity protei 25.9 60 0.0021 29.1 4.3 37 332-372 82-121 (144)
39 3s4e_A Dual specificity protei 23.7 45 0.0015 30.1 2.9 36 332-371 82-120 (144)
40 3emu_A Leucine rich repeat and 23.5 58 0.002 30.3 3.7 37 332-372 88-127 (161)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=4.3e-221 Score=1894.08 Aligned_cols=699 Identities=49% Similarity=0.842 Sum_probs=671.8
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhhc
Q 004697 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (736)
Q Consensus 27 ~~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~n 106 (736)
+++++|+++|.+||++++|+++++|+..++|.|||.+|||+|+++|.+|++.+.+.++|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEEchhhhhhhHHHHHHHh
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHH-------------HHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeE
Q 004697 107 LDIQNAY-------------ADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQ 173 (736)
Q Consensus 107 Lg~~~~~-------------~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q 173 (736)
||+++++ ++||++||++++||+++|+||||||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred cCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCceeeecccccccCCCcccccCCeeEEEEECCeEEE--cC-CCce--eeeCCeEEEEEEeeeccCCCCCCceEEEE
Q 004697 174 KITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV--NP-NGTR--KWVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (736)
Q Consensus 174 ~i~dG~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~--~~-~g~~--~~~~~~~v~av~yd~pi~g~~~~~~~~lr 248 (736)
+|.||||+|.||+|+.+|||||++|++.+++|+|+|+++. +. +|+. +|++++.|+|||||+|||||+++++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEE
Confidence 9999999999999999999999999999999999999983 34 6754 49999999999999999999999999999
Q ss_pred EEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccc
Q 004697 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 328 (736)
Q Consensus 249 lw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~ 328 (736)
||+|++++ .|+|..|+.|+|.+++++++.+|+||++|||+|++++||+||||||||||+||+|||||+|++.++ +|+
T Consensus 279 LW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~~--~l~ 355 (879)
T 1ygp_A 279 LWQARPTT-EFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKR--PWT 355 (879)
T ss_dssp EEEEEESC-SCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CGG
T ss_pred EEEeccCc-ccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHHHHHHHHHhCC--Chh
Confidence 99999654 899999999999999999999999999999999999999999999999999999999999998884 699
Q ss_pred cCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHH
Q 004697 329 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 408 (736)
Q Consensus 329 ~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in 408 (736)
.|+++++||||||||||+||||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||
T Consensus 356 ~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein 435 (879)
T 1ygp_A 356 EFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDIN 435 (879)
T ss_dssp GHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccccccccCCCCC--CcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcC-CCcccc
Q 004697 409 KRFIAMVRSTRSDLESKIPSMCILDNNPKK--PVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPN-KLQNKT 485 (736)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~--~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~-k~~~iT 485 (736)
.+|++.+++++|.+.+++.+|+++++ ++ .+||||+||+++||+|||||+||++++|+.+|++|+++||+ ||.|||
T Consensus 436 ~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~T 513 (879)
T 1ygp_A 436 WFFLEDVAKKFPKDVDLLSRISIIEE--NSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVT 513 (879)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHCSEEC--CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECC
T ss_pred HHHHHHHHHHcCCCHHHHHhcceecc--CCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcC
Confidence 99999999999999999999999987 32 38999999999999999999999999999999999999999 999999
Q ss_pred cccCccccccccChhHHHHHHHhcCc--cccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-CCcCC-
Q 004697 486 NGITPRRWLRFCNPELSKIITKWLKT--DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-GVTID- 561 (736)
Q Consensus 486 NGV~~rrWl~~~Np~l~~li~~~~g~--~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~-g~~ld- 561 (736)
||||+|||+.+|||+|++||++++|+ ++|.+++++|++|+++++|++|+++|+++|++||++|++||++++ |+.+|
T Consensus 514 NGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~ 593 (879)
T 1ygp_A 514 NGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIIN 593 (879)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSC
T ss_pred CCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecC
Confidence 99999999999999999999999993 499999999999999999999999999999999999999999999 99999
Q ss_pred ----CCceeeeeccccccchhccchhhHHHHHHHHHHhcC------ccc-ccCCCCeEEEEEecCCCCCHHHHHHHHHHH
Q 004697 562 ----PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMS------PQE-RKKTTPRTIMIGGKAFATYTNAKRIVKLVN 630 (736)
Q Consensus 562 ----p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~------~~~-~~~~~P~q~If~GKA~P~y~~aK~iIk~I~ 630 (736)
|++|||||||||||||||+||+|++++||.+|++ + |.. +..++|+||||||||||+|++||+|||+|+
T Consensus 594 ~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~ 672 (879)
T 1ygp_A 594 REYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLIN 672 (879)
T ss_dssp STTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh-CccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 5 541 112579999999999999999999999999
Q ss_pred HHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcC
Q 004697 631 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG 710 (736)
Q Consensus 631 ~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g 710 (736)
++|++|||||+|+++|||||+|||||++|++|+|||||||||||||+||||||||||||||+|||||+|||||||.++||
T Consensus 673 ~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG 752 (879)
T 1ygp_A 673 CVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIG 752 (879)
T ss_dssp HHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHC
T ss_pred HHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEeccccchhHHHHhhh
Q 004697 711 EENFFLFGAVAEQVPKLRKER 731 (736)
Q Consensus 711 ~~n~f~FG~~~~ev~~~~~~~ 731 (736)
++|+|+||++++||.++|++|
T Consensus 753 ~eN~fiFG~~~~ev~~~~~~~ 773 (879)
T 1ygp_A 753 EDNVFLFGNLSENVEELRYNH 773 (879)
T ss_dssp GGGSEEESCCHHHHHHHHHHH
T ss_pred cccEEEccCCHHHHHHHHHhC
Confidence 999999999999999999875
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=1.4e-209 Score=1809.49 Aligned_cols=707 Identities=49% Similarity=0.833 Sum_probs=665.7
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccc
Q 004697 18 IPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQG 97 (736)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~G 97 (736)
|++.......++++|+++|.+||++++|+++++||++++|.|||.+|||+++++|.+|++.+.+.++|+|||||||||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~g 81 (824)
T 2gj4_A 2 ISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMG 81 (824)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEEE
T ss_pred cccccccccccHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEchhhcch
Confidence 44544333336688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHhhcCCcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeC
Q 004697 98 RTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITK 177 (736)
Q Consensus 98 r~L~nnl~nLg~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~d 177 (736)
|+|+|||+|||+++++++||+++|++++||+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+|
T Consensus 82 r~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~d 161 (824)
T 2gj4_A 82 RTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICG 161 (824)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEET
T ss_pred hhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeecccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCC
Q 004697 178 QGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAE 257 (736)
Q Consensus 178 G~Q~E~pd~Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~ 257 (736)
|||+|.||+|++.|||||++|++.+++|+|+|+++.+.+|. +|++++.|+|||||+|||||++++||+||||+++ +.+
T Consensus 162 G~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~~ 239 (824)
T 2gj4_A 162 GWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-APN 239 (824)
T ss_dssp TEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CCC
T ss_pred CEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEeeccCCcCCCCCCceEEEEEEEee-cCc
Confidence 99999999999999999999999999999999998666783 7999999999999999999999999999999999 777
Q ss_pred cccccccCcchhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcc-cC-----cccccCC
Q 004697 258 DFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK-SG-----RQWSEFP 331 (736)
Q Consensus 258 ~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~-g~-----~~l~~l~ 331 (736)
.||+..||.|+|..++.+++.+++||++|||+|++++||+||||||||||+||+|||||+|++.+ |. .+|+.|+
T Consensus 240 ~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~~ 319 (824)
T 2gj4_A 240 DFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFP 319 (824)
T ss_dssp ----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGHH
T ss_pred ccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhcC
Confidence 89999999999999999999999999999999999999999999999999999999999998753 21 2588889
Q ss_pred CceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHH
Q 004697 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 411 (736)
Q Consensus 332 ~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~ 411 (736)
+|++||||||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+||+++++++||||++||++||.+|
T Consensus 320 ~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f 399 (824)
T 2gj4_A 320 DKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF 399 (824)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCcc
Q 004697 412 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPR 491 (736)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~r 491 (736)
++.++.++|.+.+.+.+|+++++ ...+.|||++|||++||+|||||++|++++|+.+|++|+.++|++|+|||||||+|
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~i~~-~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~r 478 (824)
T 2gj4_A 400 LNRVAAAFPGDVDRLRRMSLVEE-GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPR 478 (824)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEEC-SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTC
T ss_pred HHHHHHHcCCcHHHHHhhhhhhh-cCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChh
Confidence 99999999999888888999885 11348999999999999999999999999999999999999999999999999999
Q ss_pred ccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeecc
Q 004697 492 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 571 (736)
Q Consensus 492 rWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vk 571 (736)
||+.+|||+++++|++++| ++|.++++++++|.++.+|++|+++|+++|++||++|++||++++|+.+||++|||||||
T Consensus 479 rWl~~~NP~l~~lI~~~ig-~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vk 557 (824)
T 2gj4_A 479 RWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVK 557 (824)
T ss_dssp CCCCCTCHHHHHHHHHHHC-SGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEES
T ss_pred hhcccCCHhHHHHHHHhcC-chhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeee
Confidence 9999999999999999999 499999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEE
Q 004697 572 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFV 651 (736)
Q Consensus 572 R~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFl 651 (736)
||||||||+||+|++++||.+|++ +|.. +++|+||||||||||+|++||+|||+|+++|+++||||+|+++|||||+
T Consensus 558 Rl~eYKRq~L~~l~~i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl 634 (824)
T 2gj4_A 558 RIHEYKRQLLNCLHVITLYNRIKK-EPNK--FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL 634 (824)
T ss_dssp CCCGGGTHHHHHHHHHHHHHHHHH-CTTS--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEE
T ss_pred cchhhcchhhHHHHHHHHHHHHHh-CCCC--CCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEE
Confidence 999999999988999999999998 6653 5679999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhhh
Q 004697 652 PNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKER 731 (736)
Q Consensus 652 enY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~~ 731 (736)
|||||++||+|+||||||||||+||+||||||||||||||+|||||+|||||||.+++|++|||+||.+++|+..+++.+
T Consensus 635 ~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev~~l~~~~ 714 (824)
T 2gj4_A 635 ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRG 714 (824)
T ss_dssp TTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998886655
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=4.1e-208 Score=1792.22 Aligned_cols=688 Identities=44% Similarity=0.744 Sum_probs=667.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhhc
Q 004697 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (736)
Q Consensus 27 ~~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~n 106 (736)
+++++|+++|.+||++++|+++++||..++|.|||.+|||++.++|.+|++ .++|+||||||||||||+|+|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l~n 80 (796)
T 1l5w_A 5 FNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNLLN 80 (796)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHhCCHHHHHHHHHHHHHHHHHHHHHHhcc----cCCceEEEEehHHhHHHHHHHHHHh
Confidence 478899999999999999999999999999999999999999999999996 4689999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeeccc
Q 004697 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (736)
Q Consensus 107 Lg~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~ 186 (736)
||+++++++||+++|++++||+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 81 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~ 160 (796)
T 1l5w_A 81 LGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (796)
T ss_dssp HTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCc
Q 004697 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (736)
Q Consensus 187 Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~ 266 (736)
|+..|+|||++|++.+++|+|+|+++. + + +|+++++|+|||||+|||||+++++|+||||+|++++ .|+|..|+.
T Consensus 161 wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~fn~ 235 (796)
T 1l5w_A 161 WHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFND 235 (796)
T ss_dssp CCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS-CCCHHHHHT
T ss_pred cccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc-ccChhhcCC
Confidence 999999999999999999999999973 3 4 6999999999999999999999999999999999665 799999999
Q ss_pred chhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCccccc
Q 004697 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (736)
Q Consensus 267 ~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpala 346 (736)
|+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|+|+|+|++.++ +++.|++|++||||||||||+
T Consensus 236 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~~~~l~~p~viHlNDtHpal~ 313 (796)
T 1l5w_A 236 GDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR--KLHELADYEVIQLNDTHPTIA 313 (796)
T ss_dssp TCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CGGGHHHHEEEEEESSTTTTH
T ss_pred ccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC--ChhhcCCccEEEecCCccHhH
Confidence 999999999999999999999999999999999999999999999999999998884 688888999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccc
Q 004697 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (736)
Q Consensus 347 ipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~ 426 (736)
+|||||+++|++|++|++||++|+.+|+||||||+|||+|+||+++|+++||||++||++||.+|++++..++|.+.+.+
T Consensus 314 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~ 393 (796)
T 1l5w_A 314 IPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVW 393 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHH
Q 004697 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (736)
Q Consensus 427 ~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~ 506 (736)
.+++++++ +.|||+++||++||+|||||++|++++|+++|++|+.++|+||.|||||||+|||+.+|||+++++|+
T Consensus 394 ~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~ 469 (796)
T 1l5w_A 394 AKLAVVHD----KQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLD 469 (796)
T ss_dssp HHHCSEET----TEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHH
T ss_pred hhhhcccC----CcccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHH
Confidence 89998765 49999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHH
Q 004697 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (736)
Q Consensus 507 ~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~ 586 (736)
+++| ++|.+|++.|++|.++++|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+|++
T Consensus 470 ~~~g-~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~i 548 (796)
T 1l5w_A 470 KSLQ-KEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHI 548 (796)
T ss_dssp HHCS-SCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHH
T ss_pred HhcC-cccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHH
Confidence 9999 599999999999999999999999977899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccc
Q 004697 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (736)
Q Consensus 587 i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~ga 666 (736)
++||.+|++ +|.. +++|+||||||||||+|++||+|||+|+++|++|||||+++++|||||+|||||++||+|+|||
T Consensus 549 i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~ga 625 (796)
T 1l5w_A 549 LALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAA 625 (796)
T ss_dssp HHHHHHHHT-CTTC--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGC
T ss_pred HHHHHHHhc-CCCC--CCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhc
Confidence 999999998 7753 5679999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhhhccC
Q 004697 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG 734 (736)
Q Consensus 667 Dv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~~~y~ 734 (736)
|||||||+||+||||||||||||||+|||||||||||||.+++|++|||+||++++||.++++.+ |+
T Consensus 626 Dv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~-y~ 692 (796)
T 1l5w_A 626 DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKG-YD 692 (796)
T ss_dssp SEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CC
T ss_pred ceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcc-cC
Confidence 99999999999999999999999999999999999999999999999999999999999998876 54
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=1.7e-204 Score=1761.93 Aligned_cols=676 Identities=46% Similarity=0.755 Sum_probs=654.0
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchhccccchhHHhhc
Q 004697 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (736)
Q Consensus 27 ~~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~n 106 (736)
.++++|+++|.+||++++|+++++||..++|.|||.+|||++.++|.+|++.+... |+||||||||||||+|+|||+|
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~n 81 (796)
T 2c4m_A 4 EKQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTN 81 (796)
T ss_dssp --CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHHCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CeEEEEehhhcchhhhhhHHHh
Confidence 45678999999999999999999999999999999999999999999999977654 9999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCChHHHHhhhccccCCCCCcccchhhhHhhhhccCCCeeEEeecccccceeEEeeCCceeeeccc
Q 004697 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (736)
Q Consensus 107 Lg~~~~~~eaL~~lg~~l~~l~~~E~d~~lgnGGLGrLA~~~ldS~a~l~~P~~g~Gl~Y~~G~F~Q~i~dG~Q~E~pd~ 186 (736)
||+++++++||+++|++++||+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 82 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~ 161 (796)
T 2c4m_A 82 LGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDP 161 (796)
T ss_dssp TTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCcccccccCc
Q 004697 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (736)
Q Consensus 187 Wl~~~~pwe~~~~~~~~~v~f~G~~~~~~~g~~~~~~~~~v~av~yd~pi~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~ 266 (736)
|++.|+|||++|++.+++|+|+|+ +|+|||||+|||||+|+++|+||||+++++ ..|+|..|+.
T Consensus 162 wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~~~-~~f~l~~fn~ 225 (796)
T 2c4m_A 162 WREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAEPW-EEFDYDAFNA 225 (796)
T ss_dssp SSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEEES-SSSCHHHHHT
T ss_pred cccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEecccc-cccchhhccC
Confidence 999999999999999999999985 577899999999999999999999999954 4788888999
Q ss_pred chhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCccccc
Q 004697 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (736)
Q Consensus 267 ~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpala 346 (736)
|+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|+|+|+|++.++ +|+.|++|++||||||||||+
T Consensus 226 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~l~~l~~p~viHlNDtHpal~ 303 (796)
T 2c4m_A 226 QRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK--DLSNFAEFHSVQLNDTHPVLA 303 (796)
T ss_dssp TCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CSTTHHHHEEEEEESSTTTTH
T ss_pred cchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC--ChhhcCCCeEEEeCCChHHhH
Confidence 999999999999999999999999999999999999999999999999999998874 588888999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccc
Q 004697 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (736)
Q Consensus 347 ipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~ 426 (736)
+|||||+++|++|++|++||++++.+|+||||||+|||+|+||+++|+++||||++||++||.+|+.++..+ |.+++++
T Consensus 304 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~ 382 (796)
T 2c4m_A 304 IPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETI 382 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhc-CCcHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHH
Q 004697 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (736)
Q Consensus 427 ~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~ 506 (736)
.+++++++ ++|||++|||++||+|||||++|++++|+++|++|+.++|+||.|||||||+|||+.+|||+++++|+
T Consensus 383 ~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~ 458 (796)
T 2c4m_A 383 NRMAPIQH----GTVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLT 458 (796)
T ss_dssp HHHCSEET----TEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHH
T ss_pred hcccceeC----CcccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHH
Confidence 89998765 49999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHH
Q 004697 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (736)
Q Consensus 507 ~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~ 586 (736)
+++|+++|.+|+++|++|.++++|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+|++
T Consensus 459 ~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~i 538 (796)
T 2c4m_A 459 RLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYV 538 (796)
T ss_dssp HHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHH
T ss_pred HhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHH
Confidence 99994489999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccc
Q 004697 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (736)
Q Consensus 587 i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~ga 666 (736)
++||.+|++ +|.. +++|+||||||||||+|++||+|||+|+++|++|||||+++++|||||+|||||++||+|+|||
T Consensus 539 i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~ga 615 (796)
T 2c4m_A 539 LDLYFRIKE-DGLT--DIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPAS 615 (796)
T ss_dssp HHHHHHHHT-SCCC--SSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGC
T ss_pred HHHHHHHhh-CCCC--CCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhc
Confidence 999999998 6653 5679999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEeccccchhHHHHhh
Q 004697 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 730 (736)
Q Consensus 667 Dv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~~~~ev~~~~~~ 730 (736)
|||||||+||+||||||||||||||+|||||||||||||.+++|++|||+||++++||.++++.
T Consensus 616 Dv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~ 679 (796)
T 2c4m_A 616 DVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRES 679 (796)
T ss_dssp SEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHT
T ss_pred ceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999876
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=1.7e-34 Score=328.66 Aligned_cols=371 Identities=17% Similarity=0.185 Sum_probs=256.8
Q ss_pred EEEEEEEeecCCCcccccccCcchhhHHHhhhhhhhcccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccC
Q 004697 245 ISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG 324 (736)
Q Consensus 245 ~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRLkQe~fl~~a~lqdi~r~~~~~~g~ 324 (736)
..+++|..... .+++|+++++.|++... . .-...+|++++.. .-.=-..++.||+.|+++. .+... .+..
T Consensus 75 ~~~~~~~~~~~--gv~~y~id~~~~~~r~~----~-~~~~~~Y~~~~~~-~~~d~~~rf~~f~~a~l~~-~~~l~-~~~~ 144 (536)
T 3vue_A 75 ERVRFFHCYKR--GVDRVFIDHPSFLEKVW----G-KTGEKIYGPDTGV-DYKDNQMRFSLLCQAALEA-PRILN-LNNN 144 (536)
T ss_dssp EEEEEEECEET--TEEEEEEECTTTTCC------------------------CHHHHHHHHHHHHHHHH-HHHCC-CCCC
T ss_pred EEEEEEEEEEC--CceEEEecChhhhcccc----c-cCCCcccCCCccC-ccchHHHHHHHHHHHHHHH-HHHhc-cccc
Confidence 34566766533 57788888877764110 0 0024577642210 0000122788999999874 22211 1100
Q ss_pred ccccc-CCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhh-chhHHH
Q 004697 325 RQWSE-FPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHME 402 (736)
Q Consensus 325 ~~l~~-l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~-lpr~~~ 402 (736)
..+.. .+.++|+||||||+|++ |-+++...... ..+ ....+|||+||+.++|. |+.+.+... +|....
T Consensus 145 ~~~~~~~~~ddIiH~hDW~t~l~-~~~l~~~~~~~-----~~~--~~~~~V~TiHnl~~qg~--~~~~~~~~~~~~~~~~ 214 (536)
T 3vue_A 145 PYFKGTYGEDVVFVCNDWHTGPL-ASYLKNNYQPN-----GIY--RNAKVAFCIHNISYQGR--FAFEDYPELNLSERFR 214 (536)
T ss_dssp TTCCSCCCSCEEEEEESGGGSTH-HHHHHHHTTTT-----TSS--TTCEEEEEESCTTCCCE--EEGGGGGGGCCCGGGH
T ss_pred hhhhccCCCCEEEEECcchHHHH-HHHHHHhhhhh-----hhh--cccceeeeecCcccccc--cchhhhhhcCCchhhc
Confidence 01122 25678999999999999 77887764311 111 46789999999999998 877765532 221110
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhc-C--ccccC-c
Q 004697 403 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-D--YVSLW-P 478 (736)
Q Consensus 403 ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~-~--~~~l~-p 478 (736)
.. .+.+........ .+.+||.+.++..|+.|++||+.|++++.+. +. + +.... +
T Consensus 215 ----------~~--------~~~~~~~~~~~~---~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~ 272 (536)
T 3vue_A 215 ----------SS--------FDFIDGYDTPVE---GRKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRL 272 (536)
T ss_dssp ----------HH--------HEEEETTTSTTC---EEEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCC
T ss_pred ----------ch--------hhhhhccccccc---ccchhHHHHHHHhccEEEEcCHHHhhhhhcc-ccccccccccccc
Confidence 00 011111111111 2379999999999999999999999988754 32 2 22222 5
Q ss_pred CCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 004697 479 NKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGV 558 (736)
Q Consensus 479 ~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~ 558 (736)
.++..|.||||+..| ||..+..+...+. ..+ ..+.|..+|..|.+ ++|+
T Consensus 273 ~~i~~I~NGiD~~~~----~p~~d~~~~~~~~-----------------~~~------~~~~K~~~k~~l~~----~~gl 321 (536)
T 3vue_A 273 TGITGIVNGMDVSEW----DPSKDKYITAKYD-----------------ATT------AIEAKALNKEALQA----EAGL 321 (536)
T ss_dssp CSCEECCCCCCTTTS----CTTTCSSSSCCCC-----------------TTT------HHHHHHHHHHHHHH----HTTS
T ss_pred CCeEEEECCcchhhc----CCCCccccccccc-----------------hhh------hhhhhHHHHHHHHH----hcCC
Confidence 689999999999999 8988766654443 222 23799999999988 9999
Q ss_pred cCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcC
Q 004697 559 TIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNT 638 (736)
Q Consensus 559 ~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~ 638 (736)
..||+.+++++|.|+.++|+.++ ++..+.++.+ . ..++++.|.+.+.+.. .+...+..+
T Consensus 322 ~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~l~~--~----------~~~l~l~G~G~~~~~~------~~~~~~~~~-- 380 (536)
T 3vue_A 322 PVDRKIPLIAFIGRLEEQKGPDV-MAAAIPELMQ--E----------DVQIVLLGTGKKKFEK------LLKSMEEKY-- 380 (536)
T ss_dssp CCCTTSCEEEEECCBSGGGCHHH-HHHHHHHHTT--S----------SCEEEEECCBCHHHHH------HHHHHHHHS--
T ss_pred CCCCCCcEEEEEeeccccCChHH-HHHHHHHhHh--h----------CCeEEEEeccCchHHH------HHHHHHhhc--
Confidence 99999999999999999999999 9888877632 2 4589999998776665 555556544
Q ss_pred CcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEec
Q 004697 639 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (736)
Q Consensus 639 dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG 718 (736)
++ +|.|+..|+....+.++++||++++||+ +|+||++.|-||..|++.|+|-.|...|+.++ ..|||.|+
T Consensus 381 ----~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~d--g~~G~~~~ 450 (536)
T 3vue_A 381 ----PG--KVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIE--GKTGFHMG 450 (536)
T ss_dssp ----TT--TEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCB--TTTEEECC
T ss_pred ----CC--ceEEEEeccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeC--CCCccccc
Confidence 45 7999999999999999999999999999 89999999999999999999999999887765 47999886
Q ss_pred c
Q 004697 719 A 719 (736)
Q Consensus 719 ~ 719 (736)
.
T Consensus 451 ~ 451 (536)
T 3vue_A 451 R 451 (536)
T ss_dssp C
T ss_pred c
Confidence 5
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.80 E-value=3.5e-19 Score=205.77 Aligned_cols=309 Identities=15% Similarity=0.122 Sum_probs=207.3
Q ss_pred hhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCc
Q 004697 302 QQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVL 381 (736)
Q Consensus 302 Qe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~ 381 (736)
.+-||+.+.|+.+. . +.. ..|+++|+||||++++ |.++|... ....+|||+|+..
T Consensus 162 ~F~y~~~avl~~l~----~------~~~-~~pdIiH~HDW~tg~~-~~~Lk~~~-------------~~i~tVfTiH~te 216 (725)
T 3nb0_A 162 LLGYTVAWFLGEVA----H------LDS-QHAIVAHFHEWLAGVA-LPLCRKRR-------------IDVVTIFTTHATL 216 (725)
T ss_dssp HHHHHHHHHHHHHH----H------HCC-SEEEEEEEESGGGCTH-HHHHHHTT-------------CSCEEEEEESSCH
T ss_pred HHHHHHHHHHHHHH----h------cCC-CCCcEEEeCchhhhHH-HHHHHHhC-------------CCCCEEEEEecch
Confidence 88899998887632 1 111 3589999999999999 77777531 4788999999985
Q ss_pred ---h---hhhhhccHH-HHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchh
Q 004697 382 ---P---EALEKWSQA-VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTV 454 (736)
Q Consensus 382 ---p---eg~E~~p~~-l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~v 454 (736)
. ||. ||.. .+.. ++.+.+.. .+.+ .+.++|.+.+++.|+.|
T Consensus 217 lGR~lagqg~--~~~y~~L~~-----------------------~~~d~ea~-~~~i------~~~~~~EKaga~~AD~I 264 (725)
T 3nb0_A 217 LGRYLCASGS--FDFYNCLES-----------------------VDVDHEAG-RFGI------YHRYCIERAAAHSADVF 264 (725)
T ss_dssp HHHHHTSSSC--SCHHHHGGG-----------------------CCHHHHHH-HTTC------HHHHHHHHHHHHHSSEE
T ss_pred hhhhhhhcCC--Cchhhhhhh-----------------------cCCChhhh-hhch------hHHHHHHHHHHHhCCEE
Confidence 2 454 4422 1111 11111100 1111 12689999999999999
Q ss_pred HhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHH
Q 004697 455 NGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQ 534 (736)
Q Consensus 455 NgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~ 534 (736)
++||+.+++++++ +++ .-|+++ |-|||++..| ||. .+
T Consensus 265 TTVS~~yA~Ei~~-Ll~----r~~d~i--IpNGID~~~f----~p~------------------------------~~-- 301 (725)
T 3nb0_A 265 TTVSQITAFEAEH-LLK----RKPDGI--LPNGLNVIKF----QAF------------------------------HE-- 301 (725)
T ss_dssp EESSHHHHHHHHH-HTS----SCCSEE--CCCCBCCCCC----SST------------------------------TH--
T ss_pred EECCHHHHHHHHH-Hhc----CCCCEE--EcCCcccccc----Ccc------------------------------hh--
Confidence 9999999999985 332 224445 9999999999 563 01
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC--CcCC-CCceeeeeccccc-cchhccchhhHHHHHHHHHHhcCcccccCCCCeEEE
Q 004697 535 AEWESAKMASKKHLADYIWRVTG--VTID-PNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIM 610 (736)
Q Consensus 535 ~~~~~~K~~nK~~L~~~i~~~~g--~~ld-p~~l~d~~vkR~~-eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~I 610 (736)
+.+.|.++|++|+++++.+++ ..++ ++.++++.+.|+. +.|+.+| ++..+.++.+....... +.+=+.||
T Consensus 302 --~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~~~~~---~~~vvafi 375 (725)
T 3nb0_A 302 --FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLKVSGS---KKTVVAFI 375 (725)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHHHTTC---CCEEEEEE
T ss_pred --hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHHHhhccC---CCcEEEEE
Confidence 337889999999999988775 5676 4567777799999 8999999 99999999864321111 12224555
Q ss_pred EEecCCCCCH-----------------------HHHHHHHHHH--------------------------------HHH--
Q 004697 611 IGGKAFATYT-----------------------NAKRIVKLVN--------------------------------DVG-- 633 (736)
Q Consensus 611 f~GKA~P~y~-----------------------~aK~iIk~I~--------------------------------~la-- 633 (736)
+..-+.-++. .||++..... ...
T Consensus 376 i~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~ 455 (725)
T 3nb0_A 376 VMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRP 455 (725)
T ss_dssp ECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCC
T ss_pred EeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccC
Confidence 5443333321 1222222111 000
Q ss_pred ------------------------HHhcCCcCCCCcceEEEEcCCChhH-------HhhhcccccccccCCCCCccCCCc
Q 004697 634 ------------------------EVVNTDPEVNSYLKVVFVPNYNVSV-------AELLIPGSELSQHISTAGMEASGT 682 (736)
Q Consensus 634 ------------------------~~in~dp~~~~~lkVvFlenY~vsl-------A~~iv~gaDv~l~~s~~~~EASGT 682 (736)
+.++-...-.++.||+|++.|--+. -..++++||++..||+ +|++|.
T Consensus 456 ~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl 533 (725)
T 3nb0_A 456 EGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGY 533 (725)
T ss_dssp TTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCH
T ss_pred CCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCH
Confidence 0011111224789999999987653 3567899999999999 999999
Q ss_pred chhhhhhcCceeEEeccccchhhhhhcC-----CccEEEec
Q 004697 683 SNMKFSLNGCLIIGTLDGANVEIRQEIG-----EENFFLFG 718 (736)
Q Consensus 683 s~MKa~lNGal~i~tlDGa~vEi~e~~g-----~~n~f~FG 718 (736)
..|-||..|++.|+|-.|-..|+..+.. .++||.|-
T Consensus 534 ~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~ 574 (725)
T 3nb0_A 534 TPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIV 574 (725)
T ss_dssp HHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEE
T ss_pred HHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEe
Confidence 9999999999999999885544444331 25888883
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.47 E-value=1.7e-14 Score=158.93 Aligned_cols=290 Identities=16% Similarity=0.163 Sum_probs=191.1
Q ss_pred CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHH
Q 004697 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (736)
Q Consensus 331 ~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~ 410 (736)
.+|++||+|+++++++ +.+++.+ ...+..+++|.|+..+++. ++...+...
T Consensus 129 ~~~DiIh~~~~~~~~~-~~~~~~~------------~~~~~p~v~t~H~~~~~~~--~~~~~~~~~-------------- 179 (485)
T 1rzu_A 129 WRPDMVHAHDWQAAMT-PVYMRYA------------ETPEIPSLLTIHNIAFQGQ--FGANIFSKL-------------- 179 (485)
T ss_dssp CCCSEEEEEHHHHTTH-HHHHHHS------------SSCCCCEEEEESCTTCCCE--ECGGGGGGS--------------
T ss_pred CCCCEEEecccchhHH-HHHHhhc------------ccCCCCEEEEecCccccCC--CCHHHHhhc--------------
Confidence 4789999999998776 4444332 0145678999999877654 433222110
Q ss_pred HHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhc-Cc---cccCcCCCccccc
Q 004697 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DY---VSLWPNKLQNKTN 486 (736)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~-~~---~~l~p~k~~~iTN 486 (736)
+.....+ ....... ....++...++..++.+.+||+-..+.+++..|+ ++ ....+.++.-|-|
T Consensus 180 ---------~~~~~~~-~~~~~~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~n 246 (485)
T 1rzu_A 180 ---------ALPAHAF-GMEGIEY---YNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVN 246 (485)
T ss_dssp ---------CCCGGGS-STTTTEE---TTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCC
T ss_pred ---------CCChhhc-ccccccc---cccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcC
Confidence 0001000 0000000 0123566778889999999999888776543122 11 1123678889999
Q ss_pred ccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcee
Q 004697 487 GITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLF 566 (736)
Q Consensus 487 GV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~ 566 (736)
||+...| +|..+..+...++ .++ + +.|..+|..+.+ ++|++-++ ..+
T Consensus 247 gvd~~~~----~~~~~~~~~~~~~-----------------~~~------~-~~~~~~~~~~r~----~~~~~~~~-~~~ 293 (485)
T 1rzu_A 247 GIDADVW----NPATDHLIHDNYS-----------------AAN------L-KNRALNKKAVAE----HFRIDDDG-SPL 293 (485)
T ss_dssp CBCTTTS----CTTTCTTSSSCCB-----------------TTB------C-TTHHHHHHHHHH----HHTCCCSS-SCE
T ss_pred CCccccc----CCccccccccccc-----------------ccc------h-hhHHHhHHHHHH----hcCCCCCC-CeE
Confidence 9999988 4443222211222 122 2 345556655544 78875332 458
Q ss_pred eeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcc
Q 004697 567 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 646 (736)
Q Consensus 567 d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~l 646 (736)
++++.|+.++|+.++ ++..+.++.+ . ++++++.|.+.+.+.. .+.++++.. ++
T Consensus 294 i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~~~l~ivG~g~~~~~~------~l~~~~~~~------~~-- 346 (485)
T 1rzu_A 294 FCVISRLTWQKGIDL-MAEAVDEIVS--L----------GGRLVVLGAGDVALEG------ALLAAASRH------HG-- 346 (485)
T ss_dssp EEEESCBSTTTTHHH-HHTTHHHHHH--T----------TCEEEEEECBCHHHHH------HHHHHHHHT------TT--
T ss_pred EEEEccCccccCHHH-HHHHHHHHHh--c----------CceEEEEeCCchHHHH------HHHHHHHhC------CC--
Confidence 999999999999999 8888877643 2 5789999987543333 455555433 24
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhc-------CCccEEEecc
Q 004697 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLFGA 719 (736)
Q Consensus 647 kVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~-------g~~n~f~FG~ 719 (736)
+|+|+.+|.-+....++++||+...+|+ .|++|..-+-||..|.+.|+|-.|...|+.++. +.++||+|..
T Consensus 347 ~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~ 424 (485)
T 1rzu_A 347 RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSP 424 (485)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESS
T ss_pred cEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCC
Confidence 6888888988887899999999999999 899999999999999999999999887766542 1269999974
Q ss_pred -ccchh
Q 004697 720 -VAEQV 724 (736)
Q Consensus 720 -~~~ev 724 (736)
+.+++
T Consensus 425 ~d~~~l 430 (485)
T 1rzu_A 425 VTLDGL 430 (485)
T ss_dssp CSHHHH
T ss_pred CCHHHH
Confidence 44443
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.47 E-value=3.7e-14 Score=156.14 Aligned_cols=290 Identities=17% Similarity=0.175 Sum_probs=190.5
Q ss_pred CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHH
Q 004697 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (736)
Q Consensus 331 ~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~ 410 (736)
.+|++||+|+++++++ +-+++. ...+..+|+|.|+..+++. ++...+...
T Consensus 128 ~~~Divh~~~~~~~~~-~~~~~~-------------~~~~~p~v~t~H~~~~~~~--~~~~~~~~~-------------- 177 (485)
T 2qzs_A 128 WRPDVVHAHDWHAGLA-PAYLAA-------------RGRPAKSVFTVHNLAYQGM--FYAHHMNDI-------------- 177 (485)
T ss_dssp CCCSEEEEETGGGTTH-HHHHHH-------------TTCSSEEEEEESCTTCCCE--EEGGGGGTT--------------
T ss_pred CCCCEEEeeccchhHH-HHHHhh-------------ccCCCCEEEEecCccccCC--CCHHHHHhc--------------
Confidence 4789999999998766 433321 1146688999999876654 332222110
Q ss_pred HHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhc-Ccccc---Cc--CCCccc
Q 004697 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WP--NKLQNK 484 (736)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~-~~~~l---~p--~k~~~i 484 (736)
+.....+ .....+. .....+...++..++.+..||+-..+.+++..|+ +...+ -+ .++.-|
T Consensus 178 ---------~~~~~~~-~~~~~~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 244 (485)
T 2qzs_A 178 ---------QLPWSFF-NIHGLEF---NGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGV 244 (485)
T ss_dssp ---------TCCGGGC-STTTTEE---TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEEC
T ss_pred ---------CCCchhc-ccccccc---cccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEE
Confidence 0001000 0000000 0123566778889999999999877776532122 11111 12 688889
Q ss_pred ccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCc
Q 004697 485 TNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNS 564 (736)
Q Consensus 485 TNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~ 564 (736)
-|||+...| +|..+..+...++ .++ + ..|..+|..+.+ ++|++-+++.
T Consensus 245 ~ngvd~~~~----~~~~~~~~~~~~~-----------------~~~------~-~~~~~~~~~~r~----~~~~~~~~~~ 292 (485)
T 2qzs_A 245 LNGVDEKIW----SPETDLLLASRYT-----------------RDT------L-EDKAENKRQLQI----AMGLKVDDKV 292 (485)
T ss_dssp CCCCCTTTS----CTTTCTTSSSCCC-----------------TTC------G-GGGHHHHHHHHH----HHTCCCCTTS
T ss_pred ecCCCcccc----Ccccccccccccc-----------------ccc------h-hHHHHhHHHHHH----HcCCCCCCCC
Confidence 999999998 4543222211222 223 3 345555555444 8887655588
Q ss_pred eeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 004697 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (736)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~ 644 (736)
++++++.|+..+|+.++ ++..+.++.+ . ++++++.|.+.+.+.. .+.++++.. ++
T Consensus 293 ~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~~~l~ivG~g~~~~~~------~l~~~~~~~------~~ 347 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDL-VLEALPGLLE--Q----------GGQLALLGAGDPVLQE------GFLAAAAEY------PG 347 (485)
T ss_dssp CEEEEEEEESGGGCHHH-HHHHHHHHHH--T----------TCEEEEEEEECHHHHH------HHHHHHHHS------TT
T ss_pred eEEEEeccCccccCHHH-HHHHHHHHhh--C----------CcEEEEEeCCchHHHH------HHHHHHHhC------CC
Confidence 99999999999999999 8888777643 1 5789999987543332 444455433 24
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhc-------CCccEEEe
Q 004697 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLF 717 (736)
Q Consensus 645 ~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~-------g~~n~f~F 717 (736)
+|+|+.+|.-+....++++||+...+|+ .|++|+.-+-||..|.+.|+|-.|...|+.++. +.++||+|
T Consensus 348 --~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~ 423 (485)
T 2qzs_A 348 --QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF 423 (485)
T ss_dssp --TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE
T ss_pred --cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE
Confidence 6888888887777889999999999999 899999999999999999999888887766542 11699999
Q ss_pred cc-ccchh
Q 004697 718 GA-VAEQV 724 (736)
Q Consensus 718 G~-~~~ev 724 (736)
.. +.+++
T Consensus 424 ~~~d~~~l 431 (485)
T 2qzs_A 424 EDSNAWSL 431 (485)
T ss_dssp CSSSHHHH
T ss_pred CCCCHHHH
Confidence 75 44443
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.29 E-value=1.7e-11 Score=131.19 Aligned_cols=262 Identities=18% Similarity=0.146 Sum_probs=181.8
Q ss_pred CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHH
Q 004697 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (736)
Q Consensus 331 ~~~~viHlND~HpalaipElmR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~peg~E~~p~~l~~~~lpr~~~ii~~in~~ 410 (736)
.+|++||+|+++++++ +.+++.. .+..+++|.|+..+.+. +...+...
T Consensus 121 ~~~Dii~~~~~~~~~~-~~~~~~~--------------~~~~~v~~~h~~~~~~~---~~~~~~~~-------------- 168 (439)
T 3fro_A 121 PLPDVVHFHDWHTVFA-GALIKKY--------------FKIPAVFTIHRLNKSKL---PAFYFHEA-------------- 168 (439)
T ss_dssp CCCSEEEEESGGGHHH-HHHHHHH--------------HCCCEEEEESCCCCCCE---EHHHHHHT--------------
T ss_pred CCCeEEEecchhhhhh-HHHHhhc--------------cCCCEEEEecccccccC---chHHhCcc--------------
Confidence 5789999999988776 4444422 45678999999986654 33322210
Q ss_pred HHHHHHHhCCCCcccccccccccCCCCCCcccccchhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCc
Q 004697 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 490 (736)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~ 490 (736)
.+..... .....+...++..++.+..||+-+.+... ++....+.++.-|-|||+.
T Consensus 169 --------------~~~~~~~------~~~~~~~~~~~~~ad~ii~~S~~~~~~~~-----~~~~~~~~~i~vi~ngvd~ 223 (439)
T 3fro_A 169 --------------GLSELAP------YPDIDPEHTGGYIADIVTTVSRGYLIDEW-----GFFRNFEGKITYVFNGIDC 223 (439)
T ss_dssp --------------TCGGGCC------SSEECHHHHHHHHCSEEEESCHHHHHHTH-----HHHGGGTTSEEECCCCCCT
T ss_pred --------------ccccccc------cceeeHhhhhhhhccEEEecCHHHHHHHh-----hhhhhcCCceeecCCCCCc
Confidence 0000000 12457778888899999999998766522 1334557889999999999
Q ss_pred cccccccChhHHHHHHHhcCccccccCchhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeec
Q 004697 491 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 570 (736)
Q Consensus 491 rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~v 570 (736)
..| +|.. +. . .+...|..+. +++|+ +++ ++++++
T Consensus 224 ~~~----~~~~-------~~------------------~----------~~~~~~~~~~----~~~~~--~~~-~~i~~~ 257 (439)
T 3fro_A 224 SFW----NESY-------LT------------------G----------SRDERKKSLL----SKFGM--DEG-VTFMFI 257 (439)
T ss_dssp TTS----CGGG-------SC------------------S----------CHHHHHHHHH----HHHTC--CSC-EEEEEE
T ss_pred hhc----Cccc-------cc------------------c----------hhhhhHHHHH----HHcCC--CCC-cEEEEE
Confidence 998 3431 11 0 1122233333 36675 466 999999
Q ss_pred cccc-cchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEE
Q 004697 571 KRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVV 649 (736)
Q Consensus 571 kR~~-eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVv 649 (736)
.|+. .+|+.++ ++..+.++.+ . .. ..++++++.|.+.+.|.. .+.++++.. ++ ++
T Consensus 258 G~~~~~~Kg~~~-li~a~~~l~~--~-~~-----~~~~~l~i~G~g~~~~~~------~l~~~~~~~------~~---~~ 313 (439)
T 3fro_A 258 GRFDRGQKGVDV-LLKAIEILSS--K-KE-----FQEMRFIIIGKGDPELEG------WARSLEEKH------GN---VK 313 (439)
T ss_dssp CCSSCTTBCHHH-HHHHHHHHHT--S-GG-----GGGEEEEEECCCCHHHHH------HHHHHHHHC------TT---EE
T ss_pred cccccccccHHH-HHHHHHHHHh--c-cc-----CCCeEEEEEcCCChhHHH------HHHHHHhhc------CC---EE
Confidence 9999 9999999 8888877654 1 10 026899999988755444 566666544 23 55
Q ss_pred EEcC-CChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc-ccchh
Q 004697 650 FVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-VAEQV 724 (736)
Q Consensus 650 Flen-Y~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~-~~~ev 724 (736)
++.+ .+-+-...++.+||+.+.+|+ .|++|++-+-+|..|.+.|+|-.|..-|+.+ +++|++|.. +.+++
T Consensus 314 ~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~---~~~g~~~~~~d~~~l 385 (439)
T 3fro_A 314 VITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDIIT---NETGILVKAGDPGEL 385 (439)
T ss_dssp EECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEESSTHHHHHCC---TTTCEEECTTCHHHH
T ss_pred EEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHHHHCCCCeEEcCCCCcceeEE---cCceEEeCCCCHHHH
Confidence 5555 777778889999999999999 7999999999999999999999988776665 359999984 44444
No 10
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.88 E-value=8.5e-10 Score=131.43 Aligned_cols=144 Identities=15% Similarity=0.098 Sum_probs=111.1
Q ss_pred HhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCC---CCHHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA---TYTNAKRIVKLVND 631 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P---~y~~aK~iIk~I~~ 631 (736)
..|+..+++.++++++.|+..+|+.++ ++..+.++.+.. | ++.+++.|.+.+ .+...+...+.+.+
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~---~-------~v~LvIvG~g~~~~~~~~e~~~~~~~L~~ 631 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR---E-------LANLVVVGGDRRKESKDNEEKAEMKKMYD 631 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH---H-------HCEEEEECCCTTSCCCCHHHHHHHHHHHH
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhC---C-------CeEEEEEeCCCcccccchhhHHHHHHHHH
Confidence 456655789999999999999999999 988888876532 1 468999998873 34444555556666
Q ss_pred HHHHhcCCcCCCCcceEEEEc---CC--ChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhh
Q 004697 632 VGEVVNTDPEVNSYLKVVFVP---NY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (736)
Q Consensus 632 la~~in~dp~~~~~lkVvFle---nY--~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~ 706 (736)
+++.+ .+.+ +|.|+. ++ .-++.+.+..+||++.++|+ +|++|+.-+-||..|.+.|+|-.|...|+.
T Consensus 632 li~~l----gL~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~EiV 703 (816)
T 3s28_A 632 LIEEY----KLNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEII 703 (816)
T ss_dssp HHHHT----TCBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHHC
T ss_pred HHHHc----CCCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHHHH
Confidence 66544 2345 788875 21 24567777779999999999 899999999999999999999999888776
Q ss_pred hhcCCccEEEecc
Q 004697 707 QEIGEENFFLFGA 719 (736)
Q Consensus 707 e~~g~~n~f~FG~ 719 (736)
++ .+|||+|..
T Consensus 704 ~d--g~~Gllv~p 714 (816)
T 3s28_A 704 VH--GKSGFHIDP 714 (816)
T ss_dssp CB--TTTBEEECT
T ss_pred cc--CCcEEEeCC
Confidence 54 379999976
No 11
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=98.67 E-value=6.6e-08 Score=108.88 Aligned_cols=147 Identities=10% Similarity=0.057 Sum_probs=98.0
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y-~~aK~iIk~I~~la~~in~dp~ 641 (736)
+..+++++.|+...|+... ++..+.++.+ . .|..+ ..+++|+.|....++ ..-.++-+.+.+++..+|..-.
T Consensus 254 ~~~vil~VgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g 326 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYG 326 (482)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHHH--H-CGGGT---TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCcccCCHHH-HHHHHHHHHH--h-Ccccc---CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcc
Confidence 4578889999999999999 9999998865 4 44421 257888877644333 2223455566666666642211
Q ss_pred CCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCc------eeEEeccccchhhhhhcCCccE
Q 004697 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC------LIIGTLDGANVEIRQEIGEENF 714 (736)
Q Consensus 642 ~~~~lkVvFlen-Y~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGa------l~i~tlDGa~vEi~e~~g~~n~ 714 (736)
..+.-.|+|+.. .+-+--..++.+|||++.+|+ .|.-|+.-+-||.-|. +.+|+..|+..++ +++
T Consensus 327 ~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l------~~g 398 (482)
T 1uqt_A 327 QLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL------TSA 398 (482)
T ss_dssp BTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC------TTS
T ss_pred cCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh------CCe
Confidence 112224787654 344444578999999999999 8999999999999884 4445556766444 278
Q ss_pred EEecc-ccchh
Q 004697 715 FLFGA-VAEQV 724 (736)
Q Consensus 715 f~FG~-~~~ev 724 (736)
+++.. +.+++
T Consensus 399 ~lv~p~d~~~l 409 (482)
T 1uqt_A 399 LIVNPYDRDEV 409 (482)
T ss_dssp EEECTTCHHHH
T ss_pred EEECCCCHHHH
Confidence 88864 44444
No 12
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.64 E-value=3.8e-07 Score=96.19 Aligned_cols=190 Identities=13% Similarity=0.173 Sum_probs=131.6
Q ss_pred hccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccC
Q 004697 449 VSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 528 (736)
Q Consensus 449 ~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~ 528 (736)
..++.+-.+|+-..+.+++. ++ .+.++.-|-|||+...+. |.
T Consensus 139 ~~~d~ii~~s~~~~~~~~~~-~~-----~~~~~~vi~ngv~~~~~~----~~---------------------------- 180 (394)
T 3okp_A 139 TEVDVLTYISQYTLRRFKSA-FG-----SHPTFEHLPSGVDVKRFT----PA---------------------------- 180 (394)
T ss_dssp HHCSEEEESCHHHHHHHHHH-HC-----SSSEEEECCCCBCTTTSC----CC----------------------------
T ss_pred HhCCEEEEcCHHHHHHHHHh-cC-----CCCCeEEecCCcCHHHcC----CC----------------------------
Confidence 45666777787777766643 21 245778888999988772 21
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeE
Q 004697 529 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 608 (736)
Q Consensus 529 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q 608 (736)
++ .. +.. +++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+ . .| ++.
T Consensus 181 -~~-------~~----~~~----~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~--~-~~-------~~~ 231 (394)
T 3okp_A 181 -TP-------ED----KSA----TRKKLGF--TDTTPVIACNSRLVPRKGQDS-LIKAMPQVIA--A-RP-------DAQ 231 (394)
T ss_dssp -CH-------HH----HHH----HHHHTTC--CTTCCEEEEESCSCGGGCHHH-HHHHHHHHHH--H-ST-------TCE
T ss_pred -Cc-------hh----hHH----HHHhcCC--CcCceEEEEEeccccccCHHH-HHHHHHHHHh--h-CC-------CeE
Confidence 10 01 111 1225564 567789999999999999999 9888887755 2 22 578
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCC-----ccCCCcc
Q 004697 609 IMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAG-----MEASGTS 683 (736)
Q Consensus 609 ~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~-----~EASGTs 683 (736)
+++.|.+. +.. .+..++..+ .+ +|.|+...+-+-...++..||+.+.+|+.+ .|+.|+.
T Consensus 232 l~i~G~g~--~~~------~l~~~~~~~------~~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~ 295 (394)
T 3okp_A 232 LLIVGSGR--YES------TLRRLATDV------SQ--NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIV 295 (394)
T ss_dssp EEEECCCT--THH------HHHHHTGGG------GG--GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHH
T ss_pred EEEEcCch--HHH------HHHHHHhcc------cC--eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcH
Confidence 99999752 222 222222212 33 688888876566677889999999999931 2999999
Q ss_pred hhhhhhcCceeEEeccccchhhhhhcCCccEEEecc-ccchh
Q 004697 684 NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-VAEQV 724 (736)
Q Consensus 684 ~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~-~~~ev 724 (736)
-+-+|..|.+.|+|-.|..-|+.+. ++|++|.. +.+++
T Consensus 296 ~~Ea~a~G~PvI~~~~~~~~e~i~~---~~g~~~~~~d~~~l 334 (394)
T 3okp_A 296 YLEAQACGVPVIAGTSGGAPETVTP---ATGLVVEGSDVDKL 334 (394)
T ss_dssp HHHHHHTTCCEEECSSTTGGGGCCT---TTEEECCTTCHHHH
T ss_pred HHHHHHcCCCEEEeCCCChHHHHhc---CCceEeCCCCHHHH
Confidence 9999999999999999988776653 49999985 45544
No 13
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.63 E-value=9.4e-08 Score=103.09 Aligned_cols=200 Identities=16% Similarity=0.149 Sum_probs=133.8
Q ss_pred hhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhc
Q 004697 447 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (736)
Q Consensus 447 ai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~ 526 (736)
.+..++.+-.||+-..+.+++. + .+-+.++.-|-|||+...+. |.-
T Consensus 181 ~~~~~d~ii~~s~~~~~~~~~~-~----g~~~~k~~vi~ngvd~~~~~----~~~------------------------- 226 (438)
T 3c48_A 181 LVDNADVLAVNTQEEMQDLMHH-Y----DADPDRISVVSPGADVELYS----PGN------------------------- 226 (438)
T ss_dssp HHHHCSEEEESSHHHHHHHHHH-H----CCCGGGEEECCCCCCTTTSC----CC--------------------------
T ss_pred HHhcCCEEEEcCHHHHHHHHHH-h----CCChhheEEecCCccccccC----Ccc-------------------------
Confidence 4456777788888766666532 2 23356788889999987772 210
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCC
Q 004697 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (736)
Q Consensus 527 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P 606 (736)
. .. +. .+++++|+ +++.++++++.|+..+|+.++ ++..+.++.+ . .|. .+
T Consensus 227 ---~--------~~----~~----~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~--~-~p~-----~~ 276 (438)
T 3c48_A 227 ---D--------RA----TE----RSRRELGI--PLHTKVVAFVGRLQPFKGPQV-LIKAVAALFD--R-DPD-----RN 276 (438)
T ss_dssp ------------------CH----HHHHHTTC--CSSSEEEEEESCBSGGGCHHH-HHHHHHHHHH--H-CTT-----CS
T ss_pred ---c--------ch----hh----hhHHhcCC--CCCCcEEEEEeeecccCCHHH-HHHHHHHHHh--h-CCC-----cc
Confidence 0 00 00 01224554 467889999999999999999 8888887754 2 221 15
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhh
Q 004697 607 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (736)
Q Consensus 607 ~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MK 686 (736)
+.+++.|...+.-...+.+ .++++.. .+.+ +|.|+...+-+-...++.+||+.+.+|+ .|+.|+.-+-
T Consensus 277 ~~l~i~G~~~~~g~~~~~l----~~~~~~~----~l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~E 344 (438)
T 3c48_A 277 LRVIICGGPSGPNATPDTY----RHMAEEL----GVEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAME 344 (438)
T ss_dssp EEEEEECCBC------CHH----HHHHHHT----TCTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHH
T ss_pred eEEEEEeCCCCCCcHHHHH----HHHHHHc----CCCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHH
Confidence 7899999743211111223 3333322 1244 6888877665666778899999999998 8999999999
Q ss_pred hhhcCceeEEeccccchhhhhhcCCccEEEecc-ccchh
Q 004697 687 FSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-VAEQV 724 (736)
Q Consensus 687 a~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~-~~~ev 724 (736)
+|..|.+.|+|-.|...|+.++ .++|++|.. +.+++
T Consensus 345 ama~G~PvI~~~~~~~~e~i~~--~~~g~~~~~~d~~~l 381 (438)
T 3c48_A 345 AQASGTPVIAARVGGLPIAVAE--GETGLLVDGHSPHAW 381 (438)
T ss_dssp HHHTTCCEEEESCTTHHHHSCB--TTTEEEESSCCHHHH
T ss_pred HHHcCCCEEecCCCChhHHhhC--CCcEEECCCCCHHHH
Confidence 9999999999998888776654 368999974 44444
No 14
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.55 E-value=2.9e-07 Score=101.76 Aligned_cols=210 Identities=15% Similarity=0.069 Sum_probs=135.0
Q ss_pred chhhhccchhHhHHHHhHHHHHhh-hhcCcccc----CcCCCcccccccCccccccccChhHHHHHHHhcCccccccCch
Q 004697 445 NLCVVSAHTVNGVAQLHSDILKAD-LFADYVSL----WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (736)
Q Consensus 445 ~lai~~S~~vNgVS~lH~~vlk~~-~f~~~~~l----~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~ 519 (736)
...+..++.|-.||+-..+.+++. .|+ .+ -+.++.-|-|||+...+. |.
T Consensus 185 ~~~~~~ad~vi~~S~~~~~~~~~~~~~g---~~~~~~~~~ki~vi~ngvd~~~~~----~~------------------- 238 (499)
T 2r60_A 185 RLTMSYADKIIVSTSQERFGQYSHDLYR---GAVNVEDDDKFSVIPPGVNTRVFD----GE------------------- 238 (499)
T ss_dssp HHHHHHCSEEEESSHHHHHHTTTSGGGT---TTCCTTCGGGEEECCCCBCTTTSS----SC-------------------
T ss_pred HHHHhcCCEEEECCHHHHHHHHhhhccc---ccccccCCCCeEEECCCcChhhcC----cc-------------------
Confidence 445667788888888665554321 021 03 356788889999987773 11
Q ss_pred hHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC---CcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhc
Q 004697 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG---VTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEM 596 (736)
Q Consensus 520 ~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g---~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~ 596 (736)
+.+ +.+...+. ++| ..++++.++++++.|+..+|+.++ ++..+.++.+-
T Consensus 239 ---------~~~-------~~~~~~r~--------~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~--- 290 (499)
T 2r60_A 239 ---------YGD-------KIKAKITK--------YLERDLGSERMELPAIIASSRLDQKKNHYG-LVEAYVQNKEL--- 290 (499)
T ss_dssp ---------CCH-------HHHHHHHH--------HHHHHSCGGGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHH---
T ss_pred ---------chh-------hhHHHHHH--------HhcccccccCCCCcEEEEeecCccccCHHH-HHHHHHHHHHh---
Confidence 110 11111111 223 113467788999999999999999 88888776542
Q ss_pred CcccccCCCCeEEEEEecC-CC--CCH----HHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccc---
Q 004697 597 SPQERKKTTPRTIMIGGKA-FA--TYT----NAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS--- 666 (736)
Q Consensus 597 ~~~~~~~~~P~q~If~GKA-~P--~y~----~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~ga--- 666 (736)
.|. ...++++|.. .| .|. .-++..+.+.++++.. .+.+ +|.|+...+-+-...++++|
T Consensus 291 ~~~------~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~----~l~~--~V~~~G~v~~~~~~~~~~~a~~~ 358 (499)
T 2r60_A 291 QDK------ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNN----DCRG--KVSMFPLNSQQELAGCYAYLASK 358 (499)
T ss_dssp HHH------CEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHT----TCBT--TEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCC------ceEEEEECCCCCcccccccccccchHHHHHHHHHHHhc----CCCc--eEEECCCCCHHHHHHHHHhcCcC
Confidence 111 4578888872 22 121 1111112333333322 1244 68888776656667788999
Q ss_pred -cccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc-ccchh
Q 004697 667 -ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-VAEQV 724 (736)
Q Consensus 667 -Dv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~-~~~ev 724 (736)
|+...+|+ .|..|+.-+-||..|.+.|+|-.|...|+.+. .++|++|.. +.+++
T Consensus 359 ~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~--~~~g~l~~~~d~~~l 414 (499)
T 2r60_A 359 GSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPAEILDG--GKYGVLVDPEDPEDI 414 (499)
T ss_dssp TCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHHHHTGG--GTSSEEECTTCHHHH
T ss_pred CCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHHHHhcC--CceEEEeCCCCHHHH
Confidence 99999999 89999999999999999999998888777664 258999964 44443
No 15
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.52 E-value=2e-07 Score=99.41 Aligned_cols=188 Identities=17% Similarity=0.161 Sum_probs=125.7
Q ss_pred hhhhccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhh
Q 004697 446 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 525 (736)
Q Consensus 446 lai~~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~ 525 (736)
.++..++.+-.+|+-..+.+++. ++ . +.++.-|-|||+...+. |.
T Consensus 152 ~~~~~ad~ii~~s~~~~~~~~~~-~~----~-~~~~~vi~ngv~~~~~~----~~------------------------- 196 (394)
T 2jjm_A 152 FGIEQSDVVTAVSHSLINETHEL-VK----P-NKDIQTVYNFIDERVYF----KR------------------------- 196 (394)
T ss_dssp HHHHHSSEEEESCHHHHHHHHHH-TC----C-SSCEEECCCCCCTTTCC----CC-------------------------
T ss_pred HHHhhCCEEEECCHHHHHHHHHh-hC----C-cccEEEecCCccHHhcC----Cc-------------------------
Confidence 34556777888888777766532 21 1 56788889999887772 21
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCC
Q 004697 526 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 605 (736)
Q Consensus 526 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~ 605 (736)
+.+ +. ++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+ . .
T Consensus 197 ---~~~-------~~------------~~~~~~--~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~--~---------~ 240 (394)
T 2jjm_A 197 ---DMT-------QL------------KKEYGI--SESEKILIHISNFRKVKRVQD-VVQAFAKIVT--E---------V 240 (394)
T ss_dssp ---CCH-------HH------------HHHTTC--C---CEEEEECCCCGGGTHHH-HHHHHHHHHH--S---------S
T ss_pred ---chH-------HH------------HHHcCC--CCCCeEEEEeeccccccCHHH-HHHHHHHHHh--h---------C
Confidence 111 11 113443 356788999999999999999 8887776643 1 2
Q ss_pred CeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchh
Q 004697 606 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 685 (736)
Q Consensus 606 P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~M 685 (736)
|..+++.|.+. +. .+ +.++++.. .+.+ +|.|+. +..+ ...++++||+...+|+ .|+.|++-+
T Consensus 241 ~~~l~i~G~g~--~~--~~----l~~~~~~~----~l~~--~v~~~g-~~~~-~~~~~~~adv~v~ps~--~e~~~~~~~ 302 (394)
T 2jjm_A 241 DAKLLLVGDGP--EF--CT----ILQLVKNL----HIED--RVLFLG-KQDN-VAELLAMSDLMLLLSE--KESFGLVLL 302 (394)
T ss_dssp CCEEEEECCCT--TH--HH----HHHHHHTT----TCGG--GBCCCB-SCSC-THHHHHTCSEEEECCS--CCSCCHHHH
T ss_pred CCEEEEECCch--HH--HH----HHHHHHHc----CCCC--eEEEeC-chhh-HHHHHHhCCEEEeccc--cCCCchHHH
Confidence 67899999653 21 22 33333222 1233 566665 4433 3467789999999999 899999999
Q ss_pred hhhhcCceeEEeccccchhhhhhcCCccEEEecc-ccchh
Q 004697 686 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-VAEQV 724 (736)
Q Consensus 686 Ka~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~-~~~ev 724 (736)
-+|..|.+.|+|-.|...|+.++ .++||+|.. +.+++
T Consensus 303 EAma~G~PvI~~~~~~~~e~v~~--~~~g~~~~~~d~~~l 340 (394)
T 2jjm_A 303 EAMACGVPCIGTRVGGIPEVIQH--GDTGYLCEVGDTTGV 340 (394)
T ss_dssp HHHHTTCCEEEECCTTSTTTCCB--TTTEEEECTTCHHHH
T ss_pred HHHhcCCCEEEecCCChHHHhhc--CCceEEeCCCCHHHH
Confidence 99999999999998888776654 368999974 44444
No 16
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.33 E-value=1.7e-06 Score=83.34 Aligned_cols=137 Identities=18% Similarity=0.106 Sum_probs=102.1
Q ss_pred HHhCCcCCCCceeeeeccccc-cchhccchhhHHHHHHH--HHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHH
Q 004697 554 RVTGVTIDPNSLFDIQVKRIH-EYKRQLLNILGAIYRYK--KLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 630 (736)
Q Consensus 554 ~~~g~~ldp~~l~d~~vkR~~-eYKRq~Lnil~~i~r~~--~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~ 630 (736)
+++|++ +..+++++.|+. .+|+.++ ++..+.++. + . . .++++++.|.+.|.+.. .+.
T Consensus 29 ~~~~~~---~~~~i~~~G~~~~~~K~~~~-li~a~~~l~~~~--~-~-------~~~~l~i~G~~~~~~~~------~l~ 88 (200)
T 2bfw_A 29 SKFGMD---EGVTFMFIGRFDRGQKGVDV-LLKAIEILSSKK--E-F-------QEMRFIIIGKGDPELEG------WAR 88 (200)
T ss_dssp HHTTCC---SCEEEEEESCBCSSSSCHHH-HHHHHHHHTTSG--G-G-------GGEEEEEECCBCHHHHH------HHH
T ss_pred HHcCCC---CCCEEEEeeccccccCCHHH-HHHHHHHHHhhc--c-C-------CCeEEEEECCCChHHHH------HHH
Confidence 366763 345888999999 9999999 888777663 2 2 1 25789999987653332 444
Q ss_pred HHHHHhcCCcCCCCcceEEE-EcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhc
Q 004697 631 DVGEVVNTDPEVNSYLKVVF-VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI 709 (736)
Q Consensus 631 ~la~~in~dp~~~~~lkVvF-lenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~ 709 (736)
++.+..+ +|.| +...+-+-...++..||+.+.+|+ .|++|++-+-+|..|.+.|+|-.|...|+.
T Consensus 89 ~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~--- 154 (200)
T 2bfw_A 89 SLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDII--- 154 (200)
T ss_dssp HHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHHHHHC---
T ss_pred HHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEEEeCCCChHHHc---
Confidence 4444331 5888 666665566788899999999999 799999999999999999999888777666
Q ss_pred CCccEEEecc-ccchh
Q 004697 710 GEENFFLFGA-VAEQV 724 (736)
Q Consensus 710 g~~n~f~FG~-~~~ev 724 (736)
..++||++.. +.+++
T Consensus 155 ~~~~g~~~~~~~~~~l 170 (200)
T 2bfw_A 155 TNETGILVKAGDPGEL 170 (200)
T ss_dssp CTTTCEEECTTCHHHH
T ss_pred CCCceEEecCCCHHHH
Confidence 3478999974 44444
No 17
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.26 E-value=2.1e-06 Score=82.27 Aligned_cols=137 Identities=16% Similarity=0.104 Sum_probs=102.7
Q ss_pred CCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 004697 557 GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVV 636 (736)
Q Consensus 557 g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~i 636 (736)
+..++++..+++++.|+..+|+.++ ++..+.++ . ++.+++.|.+.... .+.+++.++..-
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l----~----------~~~l~i~G~~~~~~----~l~~~~~~~~~~- 75 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKKL----Q----------DEKLYIVGWFSKGD----HAERYARKIMKI- 75 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHH-HHHHHHHC----T----------TSCEEEEBCCCTTS----THHHHHHHHHHH-
T ss_pred ccccCCCCCEEEEEeccccccCHHH-HHHHHHhC----C----------CcEEEEEecCccHH----HHHHHHHhhhcc-
Confidence 4567788899999999999999998 76655443 1 45788888765442 233334322211
Q ss_pred cCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEE
Q 004697 637 NTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFL 716 (736)
Q Consensus 637 n~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~ 716 (736)
+.+ +|.|+...+-+-...++..||+.+.+|+ .|..|++-+-+|..|.+.|+|-.|...|+.+. ..+|++
T Consensus 76 -----l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~--~~~g~~ 144 (177)
T 2f9f_A 76 -----APD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVIN--EKTGYL 144 (177)
T ss_dssp -----SCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB--TTTEEE
T ss_pred -----cCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcC--CCccEE
Confidence 244 6888888777777888999999999999 99999999999999999999998888776654 368999
Q ss_pred eccccchh
Q 004697 717 FGAVAEQV 724 (736)
Q Consensus 717 FG~~~~ev 724 (736)
|..+.+++
T Consensus 145 ~~~d~~~l 152 (177)
T 2f9f_A 145 VNADVNEI 152 (177)
T ss_dssp ECSCHHHH
T ss_pred eCCCHHHH
Confidence 84455544
No 18
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.17 E-value=5e-06 Score=87.09 Aligned_cols=190 Identities=16% Similarity=0.159 Sum_probs=128.6
Q ss_pred ccchhHhHHHHhHHHHHhhhhcCccccCcCCCcccccccCccccccccChhHHHHHHHhcCccccccCchhHhhhhccCC
Q 004697 450 SAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 529 (736)
Q Consensus 450 ~S~~vNgVS~lH~~vlk~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~W~~~~~~l~~l~~~~~ 529 (736)
.++.+-.||+-..+.+++. | .+-+.++.-|.|||+...+. |.- ..
T Consensus 136 ~~d~ii~~s~~~~~~~~~~-~----~~~~~~~~vi~ngv~~~~~~----~~~--------------------------~~ 180 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH-Y----QTEPERFQILPPGIYPDRKY----SEQ--------------------------IP 180 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH-H----CCCGGGEEECCCCCCGGGSG----GGS--------------------------CT
T ss_pred CCcEEEEcCHHHHHHHHHH-h----CCChhheEEecCCcCHHhcC----ccc--------------------------ch
Confidence 4666777777766665532 2 23356778888999988773 210 00
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEE
Q 004697 530 NTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI 609 (736)
Q Consensus 530 d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~ 609 (736)
. .+.. +++++|+ +++...++++.|+..+|+.++ ++..+.++.+-.. .++.+
T Consensus 181 ~---------~~~~--------~~~~~~~--~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l 231 (374)
T 2iw1_A 181 N---------SREI--------YRQKNGI--KEQQNLLLQVGSDFGRKGVDR-SIEALASLPESLR---------HNTLL 231 (374)
T ss_dssp T---------HHHH--------HHHHTTC--CTTCEEEEEECSCTTTTTHHH-HHHHHHTSCHHHH---------HTEEE
T ss_pred h---------HHHH--------HHHHhCC--CCCCeEEEEeccchhhcCHHH-HHHHHHHhHhccC---------CceEE
Confidence 0 0011 1224554 467789999999999999999 8777666533100 15789
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhh
Q 004697 610 MIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSL 689 (736)
Q Consensus 610 If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~l 689 (736)
++.|.+.+ +.+.+++.++. +.+ +|.|+.. . +-...++++||+...+|+ .|+.|+.-+-+|.
T Consensus 232 ~i~G~g~~-----~~~~~~~~~~~--------~~~--~v~~~g~-~-~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a 292 (374)
T 2iw1_A 232 FVVGQDKP-----RKFEALAEKLG--------VRS--NVHFFSG-R-NDVSELMAAADLLLHPAY--QEAAGIVLLEAIT 292 (374)
T ss_dssp EEESSSCC-----HHHHHHHHHHT--------CGG--GEEEESC-C-SCHHHHHHHCSEEEECCS--CCSSCHHHHHHHH
T ss_pred EEEcCCCH-----HHHHHHHHHcC--------CCC--cEEECCC-c-ccHHHHHHhcCEEEeccc--cCCcccHHHHHHH
Confidence 99998642 23333443332 133 5777764 3 334567899999999999 8999999999999
Q ss_pred cCceeEEeccccchhhhhhcCCccEEEecc--ccchh
Q 004697 690 NGCLIIGTLDGANVEIRQEIGEENFFLFGA--VAEQV 724 (736)
Q Consensus 690 NGal~i~tlDGa~vEi~e~~g~~n~f~FG~--~~~ev 724 (736)
.|.+.|+|-.|...|+.++. ++|+++.+ +.+++
T Consensus 293 ~G~Pvi~~~~~~~~e~i~~~--~~g~~~~~~~~~~~l 327 (374)
T 2iw1_A 293 AGLPVLTTAVCGYAHYIADA--NCGTVIAEPFSQEQL 327 (374)
T ss_dssp HTCCEEEETTSTTTHHHHHH--TCEEEECSSCCHHHH
T ss_pred CCCCEEEecCCCchhhhccC--CceEEeCCCCCHHHH
Confidence 99999999988888877653 68999973 55544
No 19
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.15 E-value=9e-06 Score=87.23 Aligned_cols=143 Identities=16% Similarity=0.137 Sum_probs=105.5
Q ss_pred HhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~ 634 (736)
++|+ +++.+.++++.|+..+|+.++ ++..+.++.+ . .| ++.+++.|.+...+...++ .+.++++
T Consensus 224 ~~~~--~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~~-------~~~l~i~G~g~~~~~~~~~---~l~~~~~ 287 (416)
T 2x6q_A 224 RFDV--DPEKPIITQVSRFDPWKGIFD-VIEIYRKVKE--K-IP-------GVQLLLVGVMAHDDPEGWI---YFEKTLR 287 (416)
T ss_dssp HTTC--CTTSCEEEEECCCCTTSCHHH-HHHHHHHHHH--H-CT-------TCEEEEEECCCTTCHHHHH---HHHHHHH
T ss_pred HhCC--CCCCcEEEEEeccccccCHHH-HHHHHHHHHH--h-CC-------CeEEEEEecCcccchhHHH---HHHHHHH
Confidence 5564 467889999999999999999 8888877754 2 22 5789999988754433222 2233333
Q ss_pred HhcCCcCCCCcceEEEEc---CCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCC
Q 004697 635 VVNTDPEVNSYLKVVFVP---NYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGE 711 (736)
Q Consensus 635 ~in~dp~~~~~lkVvFle---nY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~ 711 (736)
..+ ..+ +|.|+. +++-+-...++++||+...+|+ .|..|+.-+-+|..|.+.|+|-.|...|+.+. .
T Consensus 288 ~~~----~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~--~ 357 (416)
T 2x6q_A 288 KIG----EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD--G 357 (416)
T ss_dssp HHT----TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB--T
T ss_pred HhC----CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheec--C
Confidence 331 134 577764 5555566778899999999999 89999999999999999999988877776654 3
Q ss_pred ccEEEeccccchh
Q 004697 712 ENFFLFGAVAEQV 724 (736)
Q Consensus 712 ~n~f~FG~~~~ev 724 (736)
++||++. +.+++
T Consensus 358 ~~g~l~~-d~~~l 369 (416)
T 2x6q_A 358 ETGFLVR-DANEA 369 (416)
T ss_dssp TTEEEES-SHHHH
T ss_pred CCeEEEC-CHHHH
Confidence 6999998 55554
No 20
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.93 E-value=1.5e-05 Score=85.36 Aligned_cols=133 Identities=12% Similarity=0.105 Sum_probs=95.4
Q ss_pred HhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCH--HHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT--NAKRIVKLVNDV 632 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~--~aK~iIk~I~~l 632 (736)
+.|++-+.+.+.++++.|+..+|+.++ ++..+.++.+ . .| +.++++.|.+.+... .-+.+-+++.+.
T Consensus 175 ~~~~~~~~~~~~il~vGr~~~~Kg~~~-li~a~~~l~~--~-~~-------~~~l~ivG~g~~~~~~~l~~~~~~~~~~~ 243 (413)
T 3oy2_A 175 LVGLSEYNDDVLFLNMNRNTARKRLDI-YVLAAARFIS--K-YP-------DAKVRFLCNSHHESKFDLHSIALRELVAS 243 (413)
T ss_dssp HTTCGGGTTSEEEECCSCSSGGGTHHH-HHHHHHHHHH--H-CT-------TCCEEEEEECCTTCSCCHHHHHHHHHHHH
T ss_pred hcCCCcccCceEEEEcCCCchhcCcHH-HHHHHHHHHH--h-CC-------CcEEEEEeCCcccchhhHHHHHHHHHHHc
Confidence 445543337899999999999999999 9998888755 3 22 467888888865432 113333333332
Q ss_pred HHHhcCCcCCCCc----ceEEEEcCC-ChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhh
Q 004697 633 GEVVNTDPEVNSY----LKVVFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (736)
Q Consensus 633 a~~in~dp~~~~~----lkVvFlenY-~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e 707 (736)
. +.++ -+|+++.+| +-+-...++.+||+.+.+|+ .|..|+.-+-||..|.+.|+|-.|..-|+.+
T Consensus 244 ~--------l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~ 313 (413)
T 3oy2_A 244 G--------VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFS 313 (413)
T ss_dssp T--------CSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSC
T ss_pred C--------cccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHc
Confidence 2 2331 025666665 44455568899999999999 8999999999999999999999998777765
Q ss_pred h
Q 004697 708 E 708 (736)
Q Consensus 708 ~ 708 (736)
+
T Consensus 314 ~ 314 (413)
T 3oy2_A 314 G 314 (413)
T ss_dssp T
T ss_pred c
Confidence 4
No 21
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=97.71 E-value=0.00036 Score=78.89 Aligned_cols=143 Identities=13% Similarity=0.055 Sum_probs=98.4
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y-~~aK~iIk~I~~la~~in~dp~ 641 (736)
+..++.+|.|+...|+... ++... ++++ + .|.. . .+++|..|....++ ..-.++-+.+.+++..+|..-
T Consensus 280 ~~~lIl~VgRLd~~KGi~~-lL~Af-~ll~--~-~P~~---~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~- 349 (496)
T 3t5t_A 280 GHRLVVHSGRTDPIKNAER-AVRAF-VLAA--R-GGGL---E-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL- 349 (496)
T ss_dssp TSEEEEEEEESSGGGCHHH-HHHHH-HHHH--H-TSSC---T-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CceEEEEcccCccccCHHH-HHHHH-HHHH--h-Cccc---c-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc-
Confidence 3678889999999999999 88888 7755 4 4532 1 46777666544443 233456667777777775210
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhc----CceeEEeccccchhhhhhcCCccEEEe
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN----GCLIIGTLDGANVEIRQEIGEENFFLF 717 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lN----Gal~i~tlDGa~vEi~e~~g~~n~f~F 717 (736)
+..+|.|+..-+.+---.++.+|||.+.+|+ .|.-|+--+-+|.- |.+.+|...|+-.++ | ++++++
T Consensus 350 --g~~~V~f~g~v~~~el~aly~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l----~-~~allV 420 (496)
T 3t5t_A 350 --GSDTVRIDNDNDVNHTIACFRRADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCGAAEVL----G-EYCRSV 420 (496)
T ss_dssp --CTTSEEEEECCCHHHHHHHHHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH----G-GGSEEE
T ss_pred --CCcCEEEeCCCCHHHHHHHHHhccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh----C-CCEEEE
Confidence 1115888754444444578999999999999 89999999998875 678788788876544 2 467888
Q ss_pred cc-ccchh
Q 004697 718 GA-VAEQV 724 (736)
Q Consensus 718 G~-~~~ev 724 (736)
.. +.+++
T Consensus 421 nP~D~~~l 428 (496)
T 3t5t_A 421 NPFDLVEQ 428 (496)
T ss_dssp CTTBHHHH
T ss_pred CCCCHHHH
Confidence 64 34444
No 22
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.63 E-value=7.5e-05 Score=77.84 Aligned_cols=130 Identities=17% Similarity=0.155 Sum_probs=95.6
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~ 642 (736)
+..+++++.|+..+|+.++ ++..+.++ ++.+++.|.+. +.. .+.++++..
T Consensus 161 ~~~~i~~vG~~~~~Kg~~~-li~a~~~~---------------~~~l~i~G~g~--~~~------~l~~~~~~~------ 210 (342)
T 2iuy_A 161 KEDFLLFMGRVSPHKGALE-AAAFAHAC---------------GRRLVLAGPAW--EPE------YFDEITRRY------ 210 (342)
T ss_dssp CCSCEEEESCCCGGGTHHH-HHHHHHHH---------------TCCEEEESCCC--CHH------HHHHHHHHH------
T ss_pred CCCEEEEEeccccccCHHH-HHHHHHhc---------------CcEEEEEeCcc--cHH------HHHHHHHHh------
Confidence 4567899999999999998 77665543 24688889873 222 333344433
Q ss_pred CCcceEEEEcCCChhHHhhhcccccccccCCCC--------CccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccE
Q 004697 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTA--------GMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENF 714 (736)
Q Consensus 643 ~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~--------~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~ 714 (736)
++ +|.|+..-+-.-...++.+||+...+|+. -.|+.|+.-+-+|..|.+.|+|-.|..-|+.++.|.++|
T Consensus 211 ~~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g 288 (342)
T 2iuy_A 211 GS--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVG 288 (342)
T ss_dssp TT--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECC
T ss_pred CC--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCce
Confidence 23 68887766555557778999999999982 169999999999999999999999988888775333688
Q ss_pred EEeccccchh
Q 004697 715 FLFGAVAEQV 724 (736)
Q Consensus 715 f~FG~~~~ev 724 (736)
|+|..+.+++
T Consensus 289 ~~~~~d~~~l 298 (342)
T 2iuy_A 289 YGTDFAPDEA 298 (342)
T ss_dssp SSSCCCHHHH
T ss_pred EEcCCCHHHH
Confidence 9887644443
No 23
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.47 E-value=0.00027 Score=65.88 Aligned_cols=114 Identities=18% Similarity=0.158 Sum_probs=81.0
Q ss_pred ceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 004697 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (736)
Q Consensus 564 ~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~ 643 (736)
.+.++++.|+..+|+.++ ++..+.++ +. . .++.+++.|.+.. . ..+.++ ++.. +
T Consensus 2 ~~~i~~~G~~~~~Kg~~~-li~a~~~l---~~-~-------~~~~l~i~G~g~~--~--~~~~~~----~~~~------~ 55 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSV-LIKAVALS---KY-K-------QDIVLLLKGKGPD--E--KKIKLL----AQKL------G 55 (166)
T ss_dssp CEEEEEESCCSTTTTHHH-HHHHHHTC---TT-G-------GGEEEEEECCSTT--H--HHHHHH----HHHH------T
T ss_pred ceEEEEEeccchhcCHHH-HHHHHHHh---cc-C-------CCeEEEEEeCCcc--H--HHHHHH----HHHc------C
Confidence 367899999999999999 88877664 22 1 2578999997532 1 223333 3323 1
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCc-eeEEecc-ccchhhhhh
Q 004697 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC-LIIGTLD-GANVEIRQE 708 (736)
Q Consensus 644 ~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGa-l~i~tlD-Ga~vEi~e~ 708 (736)
- +|.| .-.+-+-...++..||+...+|+ .|..|++-+-+|..|. +.|+|-+ |..-|+.++
T Consensus 56 ~--~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~ 117 (166)
T 3qhp_A 56 V--KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFALD 117 (166)
T ss_dssp C--EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSS
T ss_pred C--eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhccC
Confidence 1 4555 44445566778999999999999 8999999999999997 8888554 455555443
No 24
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.39 E-value=0.00017 Score=76.18 Aligned_cols=131 Identities=12% Similarity=0.095 Sum_probs=96.3
Q ss_pred Cceeeeecccc-ccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~-~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
+...++++.|+ ..+|+.++ ++..+.++.+ . . .++++++.|.+.. ..+.+++.++
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~~~~-----~~l~~~~~~~--------- 261 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAALPKLVA--R-F-------PDVEILIVGRGDE-----DELREQAGDL--------- 261 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHHHHHHT--T-S-------TTCEEEEESCSCH-----HHHHHHTGGG---------
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHHHHHHH--H-C-------CCeEEEEEcCCcH-----HHHHHHHHhc---------
Confidence 45788999999 99999999 8887776643 2 1 2578999998653 2333333222
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEec-cc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG-AV 720 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG-~~ 720 (736)
.+ +|.|+...+-.-...++..||+.+.+|. ..|..|+.-+-+|..|.+.|+|-.|..-|+.++ .++|++|. .+
T Consensus 262 -~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~~~g~~~~~~d 335 (406)
T 2gek_A 262 -AG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD--GDAGRLVPVDD 335 (406)
T ss_dssp -GG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT--TTSSEECCTTC
T ss_pred -cC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcC--CCceEEeCCCC
Confidence 23 5888776655555778899999999973 279999999999999999999988888776654 36899995 34
Q ss_pred cchh
Q 004697 721 AEQV 724 (736)
Q Consensus 721 ~~ev 724 (736)
.+++
T Consensus 336 ~~~l 339 (406)
T 2gek_A 336 ADGM 339 (406)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 25
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.18 E-value=0.014 Score=63.78 Aligned_cols=128 Identities=10% Similarity=0.072 Sum_probs=89.2
Q ss_pred Cceeeeecccc-ccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~-~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
+..++.++.|+ .+.|+.++ ++..+.++.+ . .|.. .+..+++.|.+..... + .
T Consensus 240 ~~~~il~~gr~~~~~Kg~~~-li~A~~~l~~--~-~~~~----~~~~l~ivG~~~~~~~---------------l----~ 292 (413)
T 2x0d_A 240 KEKIILVYGRPSVKRNAFTL-IVEALKIFVQ--K-YDRS----NEWKIISVGEKHKDIA---------------L----G 292 (413)
T ss_dssp CCSEEEEEECTTCGGGCHHH-HHHHHHHHHH--H-CTTG----GGCEEEEEESCCCCEE---------------E----E
T ss_pred CCCEEEEEecCchhccCHHH-HHHHHHHHHH--h-CCCC----CceEEEEEcCCchhhh---------------c----C
Confidence 34556677886 68899998 8888887754 2 2210 1368899997654311 1 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccchhhhhhcCCccEEEecc-c
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-V 720 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~f~FG~-~ 720 (736)
..+ +|.|+..-+-+--..++++||++..+|. .|..|..-+-||.-|.+.|++-.| ..|+.++ ++||+++.. +
T Consensus 293 ~~~--~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~~g-~~e~v~~--~~~G~lv~~~d 365 (413)
T 2x0d_A 293 KGI--HLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNKYE-NKDLSNW--HSNIVSLEQLN 365 (413)
T ss_dssp TTE--EEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEECBT-TBCGGGT--BTTEEEESSCS
T ss_pred CcC--cEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeCCC-cchhhhc--CCCEEEeCCCC
Confidence 133 7888876555555678899999999999 888899999999999999986544 4466554 369999863 4
Q ss_pred cchh
Q 004697 721 AEQV 724 (736)
Q Consensus 721 ~~ev 724 (736)
.+++
T Consensus 366 ~~~l 369 (413)
T 2x0d_A 366 PENI 369 (413)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 26
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=95.56 E-value=0.024 Score=59.25 Aligned_cols=127 Identities=15% Similarity=0.092 Sum_probs=82.8
Q ss_pred CCceeeeeccccccc-hhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 562 PNSLFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 562 p~~l~d~~vkR~~eY-KRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
++..+.+++.|+.+. |+... ++..+.++.+ . .| .+++|++ .+|. .. +.+.+.++.. .
T Consensus 204 ~~~~vl~~~gr~~~~~K~~~~-li~a~~~l~~--~-~~-------~~~~i~~--~g~~-~~---~~~~~~~~~~---~-- 261 (375)
T 3beo_A 204 NNRLVLMTAHRRENLGEPMRN-MFRAIKRLVD--K-HE-------DVQVVYP--VHMN-PV---VRETANDILG---D-- 261 (375)
T ss_dssp TSEEEEEECCCGGGTTHHHHH-HHHHHHHHHH--H-CT-------TEEEEEE--CCSC-HH---HHHHHHHHHT---T--
T ss_pred CCCeEEEEecccccchhHHHH-HHHHHHHHHh--h-CC-------CeEEEEe--CCCC-HH---HHHHHHHHhh---c--
Confidence 344567789999876 99888 8887777643 2 11 3566664 3343 21 2223333321 0
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecc-ccchhhhhhcCCccEEEecc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlD-Ga~vEi~e~~g~~n~f~FG~ 719 (736)
.+ +|.|+...+-.-...++++||+...+| |+.-+-+|.-|.+.|+|.+ |...|+.+ .++|+++..
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~---~g~g~~v~~ 327 (375)
T 3beo_A 262 --YG--RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIE---AGTLKLAGT 327 (375)
T ss_dssp --CT--TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHH---TTSEEECCS
T ss_pred --cC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeec---CCceEEcCC
Confidence 13 588865544445567789999999877 4447789999999999966 76766644 349999976
Q ss_pred ccchh
Q 004697 720 VAEQV 724 (736)
Q Consensus 720 ~~~ev 724 (736)
+.+++
T Consensus 328 d~~~l 332 (375)
T 3beo_A 328 DEETI 332 (375)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 66555
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=95.43 E-value=0.039 Score=57.86 Aligned_cols=124 Identities=13% Similarity=0.043 Sum_probs=80.1
Q ss_pred ceeeeeccccccc-hhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEE-ecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 564 SLFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG-GKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 564 ~l~d~~vkR~~eY-KRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~-GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
..+.+++.|+... |+... ++..+.++.+ . .| ++++++. |.. | . ..+.+.++.. .
T Consensus 206 ~~vl~~~gr~~~~~kg~~~-li~a~~~l~~--~-~~-------~~~l~i~~g~~-~--~----~~~~l~~~~~---~--- 261 (384)
T 1vgv_A 206 KMILVTGHRRESFGRGFEE-ICHALADIAT--T-HQ-------DIQIVYPVHLN-P--N----VREPVNRILG---H--- 261 (384)
T ss_dssp EEEEEECCCBSSCCHHHHH-HHHHHHHHHH--H-CT-------TEEEEEECCBC-H--H----HHHHHHHHHT---T---
T ss_pred CEEEEEeCCccccchHHHH-HHHHHHHHHh--h-CC-------CeEEEEEcCCC-H--H----HHHHHHHHhh---c---
Confidence 3567799999887 98877 7777776644 2 11 4677774 421 2 1 1123333321 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecc-ccchhhhhhcCCccEEEeccc
Q 004697 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGAV 720 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlD-Ga~vEi~e~~g~~n~f~FG~~ 720 (736)
.+ +|.|+..-+-+-...++++||+...+| |+.-+-+|.-|.+.|+|-. |...|+.+. ++|+++..+
T Consensus 262 -~~--~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~---g~g~lv~~d 328 (384)
T 1vgv_A 262 -VK--NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTA---GTVRLVGTD 328 (384)
T ss_dssp -CT--TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHH---TSEEEECSS
T ss_pred -CC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhC---CceEEeCCC
Confidence 13 588864322234556789999999887 4447799999999999976 766666543 499999776
Q ss_pred cchh
Q 004697 721 AEQV 724 (736)
Q Consensus 721 ~~ev 724 (736)
.+++
T Consensus 329 ~~~l 332 (384)
T 1vgv_A 329 KQRI 332 (384)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
No 28
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=95.38 E-value=0.051 Score=58.85 Aligned_cols=111 Identities=14% Similarity=0.054 Sum_probs=79.8
Q ss_pred eeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 004697 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (736)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~ 644 (736)
..++++.|+.++|+. +..+.+ . . .++.+++.|.+. + .+..+.+
T Consensus 223 ~~i~~vGrl~~~Kg~-------~~~l~~--~-~-------~~~~l~ivG~g~----------------~----~~~~l~~ 265 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF-------FVVASK--A-F-------PQVTFHVIGSGM----------------G----RHPGYGD 265 (406)
T ss_dssp EEEEEECCTTBCHHH-------HHHHHH--H-C-------TTEEEEEESCSS----------------C----CCTTCCT
T ss_pred cEEEEEeccccccCH-------HHHHHH--h-C-------CCeEEEEEeCch----------------H----HhcCCCC
Confidence 788999999999998 233322 2 1 257899999764 1 1223455
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhh-------hcCceeEEeccccchhhhhhcCCccEEE-
Q 004697 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS-------LNGCLIIGTLDGANVEIRQEIGEENFFL- 716 (736)
Q Consensus 645 ~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~-------lNGal~i~tlDGa~vEi~e~~g~~n~f~- 716 (736)
+|.|+.--.-+-...++++||+...+|+ .|..|..-+-+| .-|.+.|+|-. | . ++++|++
T Consensus 266 --~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~~---v--~---~~~~G~l~ 333 (406)
T 2hy7_A 266 --NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPNA---V--V---GPYKSRFG 333 (406)
T ss_dssp --TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG---G--T---CSCSSEEE
T ss_pred --CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEehh---c--c---cCcceEEE
Confidence 6888876554555678899999999999 899999999999 99999999854 2 1 2467888
Q ss_pred ecc-ccchh
Q 004697 717 FGA-VAEQV 724 (736)
Q Consensus 717 FG~-~~~ev 724 (736)
|.. +.+++
T Consensus 334 v~~~d~~~l 342 (406)
T 2hy7_A 334 YTPGNADSV 342 (406)
T ss_dssp ECTTCHHHH
T ss_pred eCCCCHHHH
Confidence 754 33443
No 29
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.09 E-value=0.042 Score=61.32 Aligned_cols=111 Identities=13% Similarity=0.148 Sum_probs=75.7
Q ss_pred HhCCcCCCCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 004697 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (736)
Q Consensus 555 ~~g~~ldp~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~ 634 (736)
++|++ ++. ++.++.|+.. |+.+. ++..+.++.+ . .| +..+++.|...| .-..+.+++.+..
T Consensus 370 ~~~~~--~~~-~v~~~g~~~~-K~~~~-li~a~~~l~~--~-~~-------~~~l~i~G~~g~---~~~~l~~~~~~~~- 430 (568)
T 2vsy_A 370 QCGLP--EQG-VVLCCFNNSY-KLNPQ-SMARMLAVLR--E-VP-------DSVLWLLSGPGE---ADARLRAFAHAQG- 430 (568)
T ss_dssp GGTCC--TTS-CEEEECCCGG-GCCHH-HHHHHHHHHH--H-CT-------TCEEEEECCSTT---HHHHHHHHHHHTT-
T ss_pred ccCCC--CCC-EEEEeCCccc-cCCHH-HHHHHHHHHH--h-CC-------CcEEEEecCCHH---HHHHHHHHHHHcC-
Confidence 45653 333 4448899999 99999 8888877754 3 22 467888885222 1122333332221
Q ss_pred HhcCCcCCC-CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEE
Q 004697 635 VVNTDPEVN-SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIG 696 (736)
Q Consensus 635 ~in~dp~~~-~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~ 696 (736)
+. + +|.|+.--+-+--..++++||+++.+|+ + ..|+.-+-+|..|.+.|+
T Consensus 431 -------l~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~-~~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 431 -------VDAQ--RLVFMPKLPHPQYLARYRHADLFLDTHP--Y-NAHTTASDALWTGCPVLT 481 (568)
T ss_dssp -------CCGG--GEEEECCCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHHHHTTCCEEB
T ss_pred -------CChh--HEEeeCCCCHHHHHHHHhcCCEEeeCCC--C-CCcHHHHHHHhCCCCEEe
Confidence 23 4 6888876554445667899999999999 6 889999999999998888
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=90.06 E-value=0.9 Score=47.42 Aligned_cols=126 Identities=15% Similarity=0.064 Sum_probs=75.7
Q ss_pred CCceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEE-ecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 004697 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG-GKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (736)
Q Consensus 562 p~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~-GKA~P~y~~aK~iIk~I~~la~~in~dp 640 (736)
++..+.+++.|+...|+... ++..+.++.+ . .| +.++++. |.. | . .-+.+.+.+. .
T Consensus 197 ~~~~vl~~~gr~~~~k~~~~-ll~a~~~l~~--~-~~-------~~~lv~~~g~~-~--~----~~~~l~~~~~---~-- 253 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWPLLSD-LAQALKRVAE--A-FP-------HLTFVYPVHLN-P--V----VREAVFPVLK---G-- 253 (376)
T ss_dssp SSCEEEECCCCGGGGGGHHH-HHHHHHHHHH--H-CT-------TSEEEEECCSC-H--H----HHHHHHHHHT---T--
T ss_pred CCCEEEEEeCcccchHHHHH-HHHHHHHHHh--h-CC-------CeEEEEECCCC-H--H----HHHHHHHHhc---c--
Confidence 34456678999998996555 6666665533 2 11 3567764 543 1 1 1122323221 1
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecc-ccchhhhhhcCCccEEEecc
Q 004697 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGA 719 (736)
Q Consensus 641 ~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlD-Ga~vEi~e~~g~~n~f~FG~ 719 (736)
.+ +|.|+....-.--..++++||+...+| .|+ -+-+|..|.+.|++-+ |...|+.+ .++|+++..
T Consensus 254 --~~--~v~~~g~~g~~~~~~~~~~ad~~v~~S------~g~-~lEA~a~G~PvI~~~~~~~~~~~~~---~g~g~lv~~ 319 (376)
T 1v4v_A 254 --VR--NFVLLDPLEYGSMAALMRASLLLVTDS------GGL-QEEGAALGVPVVVLRNVTERPEGLK---AGILKLAGT 319 (376)
T ss_dssp --CT--TEEEECCCCHHHHHHHHHTEEEEEESC------HHH-HHHHHHTTCCEEECSSSCSCHHHHH---HTSEEECCS
T ss_pred --CC--CEEEECCCCHHHHHHHHHhCcEEEECC------cCH-HHHHHHcCCCEEeccCCCcchhhhc---CCceEECCC
Confidence 23 588885433333456789999998776 244 5589999999998743 55555433 258899965
Q ss_pred ccchh
Q 004697 720 VAEQV 724 (736)
Q Consensus 720 ~~~ev 724 (736)
+.+++
T Consensus 320 d~~~l 324 (376)
T 1v4v_A 320 DPEGV 324 (376)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 65554
No 31
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=88.18 E-value=0.66 Score=48.03 Aligned_cols=119 Identities=5% Similarity=-0.109 Sum_probs=74.5
Q ss_pred CCce-eeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeE-EEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 004697 562 PNSL-FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT-IMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (736)
Q Consensus 562 p~~l-~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q-~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (736)
++.. +.+...|+...|+.++ ++..+.++.+ +.. ++++|.+. . +++.+++.++.
T Consensus 181 ~~~~~il~~~g~~~~~k~~~~-li~a~~~l~~-------------~~~~l~i~G~~~---~--~~l~~~~~~~~------ 235 (364)
T 1f0k_A 181 EGPVRVLVVGGSQGARILNQT-MPQVAAKLGD-------------SVTIWHQSGKGS---Q--QSVEQAYAEAG------ 235 (364)
T ss_dssp CSSEEEEEECTTTCCHHHHHH-HHHHHHHHGG-------------GEEEEEECCTTC---H--HHHHHHHHHTT------
T ss_pred CCCcEEEEEcCchHhHHHHHH-HHHHHHHhcC-------------CcEEEEEcCCch---H--HHHHHHHhhcC------
Confidence 4444 5567789999999888 7666655421 345 56788775 1 23333332211
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccc-------hhhhhhcCCc
Q 004697 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGAN-------VEIRQEIGEE 712 (736)
Q Consensus 640 p~~~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~-------vEi~e~~g~~ 712 (736)
+ + +|.|+..- +-...++++||+...+|. |+.-+-+|..|.+.|+|-.|.. .+...+ .+
T Consensus 236 --~-~--~v~~~g~~--~~~~~~~~~ad~~v~~sg------~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~--~g 300 (364)
T 1f0k_A 236 --Q-P--QHKVTEFI--DDMAAAYAWADVVVCRSG------ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK--AG 300 (364)
T ss_dssp --C-T--TSEEESCC--SCHHHHHHHCSEEEECCC------HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH--TT
T ss_pred --C-C--ceEEecch--hhHHHHHHhCCEEEECCc------hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHh--CC
Confidence 1 2 46665543 334567899999999873 6777889999999999976632 111222 24
Q ss_pred cEEEeccc
Q 004697 713 NFFLFGAV 720 (736)
Q Consensus 713 n~f~FG~~ 720 (736)
.|+++...
T Consensus 301 ~g~~~~~~ 308 (364)
T 1f0k_A 301 AAKIIEQP 308 (364)
T ss_dssp SEEECCGG
T ss_pred cEEEeccc
Confidence 68998754
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=61.23 E-value=24 Score=37.72 Aligned_cols=135 Identities=15% Similarity=0.135 Sum_probs=76.0
Q ss_pred HHHHHhCCcCCCCc-eeeeeccccccc-hhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEE-ecCCCCCHHHHHHHH
Q 004697 551 YIWRVTGVTIDPNS-LFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG-GKAFATYTNAKRIVK 627 (736)
Q Consensus 551 ~i~~~~g~~ldp~~-l~d~~vkR~~eY-KRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~-GKA~P~y~~aK~iIk 627 (736)
.+++++|+ ++|+. .+.+...|..+. |+... ++..+.++.+ . .| .+++|+. |.. | .-++
T Consensus 218 ~~r~~lg~-l~~~~~~vlv~~hR~~~~~~~~~~-ll~A~~~l~~--~-~~-------~~~~v~~~g~~-~---~~~~--- 278 (396)
T 3dzc_A 218 TLESQFPM-LDASKKLILVTGHRRESFGGGFER-ICQALITTAE--Q-HP-------ECQILYPVHLN-P---NVRE--- 278 (396)
T ss_dssp HHHHTCTT-CCTTSEEEEEECSCBCCCTTHHHH-HHHHHHHHHH--H-CT-------TEEEEEECCBC-H---HHHH---
T ss_pred HHHHHhCc-cCCCCCEEEEEECCcccchhHHHH-HHHHHHHHHH--h-CC-------CceEEEEeCCC-h---HHHH---
Confidence 34456773 23333 344566665444 54333 5565555543 2 11 4678875 432 2 1122
Q ss_pred HHHHHHHHhcCCcCCCCcceEEEEcCCC-hhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEec-cccchhh
Q 004697 628 LVNDVGEVVNTDPEVNSYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL-DGANVEI 705 (736)
Q Consensus 628 ~I~~la~~in~dp~~~~~lkVvFlenY~-vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tl-DGa~vEi 705 (736)
.+.+. +.. .+ +|.|++..+ .++. .++++||+..-.| |+...-+|.-|.+.|.+. .|...|.
T Consensus 279 ~l~~~---~~~----~~--~v~~~~~lg~~~~~-~l~~~ad~vv~~S-------Gg~~~EA~a~G~PvV~~~~~~~~~e~ 341 (396)
T 3dzc_A 279 PVNKL---LKG----VS--NIVLIEPQQYLPFV-YLMDRAHIILTDS-------GGIQEEAPSLGKPVLVMRETTERPEA 341 (396)
T ss_dssp HHHHH---TTT----CT--TEEEECCCCHHHHH-HHHHHCSEEEESC-------SGGGTTGGGGTCCEEECCSSCSCHHH
T ss_pred HHHHH---HcC----CC--CEEEeCCCCHHHHH-HHHHhcCEEEECC-------ccHHHHHHHcCCCEEEccCCCcchHH
Confidence 23222 111 23 577876655 3455 8899999987554 555578999999999874 3444555
Q ss_pred hhhcCCccEEEeccccchh
Q 004697 706 RQEIGEENFFLFGAVAEQV 724 (736)
Q Consensus 706 ~e~~g~~n~f~FG~~~~ev 724 (736)
.+. +.+++.+.+.+++
T Consensus 342 v~~---G~~~lv~~d~~~l 357 (396)
T 3dzc_A 342 VAA---GTVKLVGTNQQQI 357 (396)
T ss_dssp HHH---TSEEECTTCHHHH
T ss_pred HHc---CceEEcCCCHHHH
Confidence 443 3567888766555
No 33
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=57.93 E-value=27 Score=36.92 Aligned_cols=120 Identities=16% Similarity=0.041 Sum_probs=66.0
Q ss_pred eeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcc
Q 004697 567 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 646 (736)
Q Consensus 567 d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~~~~l 646 (736)
.+.+++ + .|+.++ ++..+.++.+ . . .+.+++++|. +|.. ..++-+++.+..-.. .....+.-
T Consensus 199 i~~~~~-~-~k~~~~-ll~A~~~l~~--~-~-------p~~~lvivG~-g~~~--~~~l~~~~~~~gl~~--~~~~~~~~ 260 (374)
T 2xci_A 199 IVAGSI-H-TGEVEI-ILKAFKEIKK--T-Y-------SSLKLILVPR-HIEN--AKIFEKKARDFGFKT--SFFENLEG 260 (374)
T ss_dssp EEEEEE-C-GGGHHH-HHHHHHHHHT--T-C-------TTCEEEEEES-SGGG--HHHHHHHHHHTTCCE--EETTCCCS
T ss_pred EEEEeC-C-CchHHH-HHHHHHHHHh--h-C-------CCcEEEEECC-CHHH--HHHHHHHHHHCCCce--EEecCCCC
Confidence 334444 3 477777 7666655532 2 1 1478889994 4543 223334443322000 00000000
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCc-cCCCcchhhhhhcCceeEEecc-ccchhhhhh
Q 004697 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLD-GANVEIRQE 708 (736)
Q Consensus 647 kVvFlenY~vslA~~iv~gaDv~l~~s~~~~-EASGTs~MKa~lNGal~i~tlD-Ga~vEi~e~ 708 (736)
+| ++.++--.+ ..++++||+...+|. + |.-|.+-+-+|..|.+.|++-+ |..-|+.+.
T Consensus 261 ~v-~~~~~~~dl-~~~y~~aDv~vl~ss--~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~ 320 (374)
T 2xci_A 261 DV-ILVDRFGIL-KELYPVGKIAIVGGT--FVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEF 320 (374)
T ss_dssp SE-EECCSSSCH-HHHGGGEEEEEECSS--SSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHH
T ss_pred cE-EEECCHHHH-HHHHHhCCEEEECCc--ccCCCCcCHHHHHHhCCCEEECCCccChHHHHHH
Confidence 24 445554444 578899999777765 4 4457778899999999996533 555555544
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=53.59 E-value=32 Score=36.94 Aligned_cols=125 Identities=10% Similarity=0.038 Sum_probs=73.7
Q ss_pred ceeeeeccccccc-hhccchhhHHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 004697 564 SLFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (736)
Q Consensus 564 ~l~d~~vkR~~eY-KRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If~GKA~P~y~~aK~iIk~I~~la~~in~dp~~ 642 (736)
..+.+...|..+. |.... ++..+.++.+ . .| .++||+.+ ||+- .-++ .+.+.. ..
T Consensus 225 ~~vlv~~~r~~~~~~~l~~-ll~a~~~l~~--~-~~-------~~~~v~~~--~~~~-~~~~---~l~~~~---~~---- 280 (403)
T 3ot5_A 225 RLILMTAHRRENLGEPMQG-MFEAVREIVE--S-RE-------DTELVYPM--HLNP-AVRE---KAMAIL---GG---- 280 (403)
T ss_dssp EEEEECCCCHHHHTTHHHH-HHHHHHHHHH--H-CT-------TEEEEEEC--CSCH-HHHH---HHHHHH---TT----
T ss_pred CEEEEEeCcccccCcHHHH-HHHHHHHHHH--h-CC-------CceEEEec--CCCH-HHHH---HHHHHh---CC----
Confidence 3555667776555 43222 5555555543 2 11 46888863 2331 1122 232221 11
Q ss_pred CCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecc-ccchhhhhhcCCccEEEecccc
Q 004697 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGAVA 721 (736)
Q Consensus 643 ~~~lkVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlD-Ga~vEi~e~~g~~n~f~FG~~~ 721 (736)
.+ +|.|++.-+-.--..++++||+.+-. ||+.++-+|.-|.+.|.+.+ |-..|..+ .+++++.+.+.
T Consensus 281 ~~--~v~l~~~l~~~~~~~l~~~ad~vv~~-------SGg~~~EA~a~g~PvV~~~~~~~~~e~v~---~g~~~lv~~d~ 348 (403)
T 3ot5_A 281 HE--RIHLIEPLDAIDFHNFLRKSYLVFTD-------SGGVQEEAPGMGVPVLVLRDTTERPEGIE---AGTLKLIGTNK 348 (403)
T ss_dssp CT--TEEEECCCCHHHHHHHHHHEEEEEEC-------CHHHHHHGGGTTCCEEECCSSCSCHHHHH---HTSEEECCSCH
T ss_pred CC--CEEEeCCCCHHHHHHHHHhcCEEEEC-------CccHHHHHHHhCCCEEEecCCCcchhhee---CCcEEEcCCCH
Confidence 12 58888765544455688999998744 36666899999999998844 55556543 35889988766
Q ss_pred chh
Q 004697 722 EQV 724 (736)
Q Consensus 722 ~ev 724 (736)
+++
T Consensus 349 ~~l 351 (403)
T 3ot5_A 349 ENL 351 (403)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 35
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=50.85 E-value=26 Score=37.63 Aligned_cols=69 Identities=20% Similarity=0.155 Sum_probs=50.1
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcchhhhhhcCceeEEecccc-chhhhhhcCCccEEEeccccchhH
Q 004697 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA-NVEIRQEIGEENFFLFGAVAEQVP 725 (736)
Q Consensus 647 kVvFlenY~vslA~~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa-~vEi~e~~g~~n~f~FG~~~~ev~ 725 (736)
+|.+++..+-.--..++++||+.. +. ||+.+.-++.-|.+.|.+.+.+ +.|..+ .+++.+.|.+.+++.
T Consensus 264 ~v~l~~~lg~~~~~~l~~~adlvv--t~-----SGgv~~EA~alG~Pvv~~~~~ter~e~v~---~G~~~lv~~d~~~i~ 333 (385)
T 4hwg_A 264 KIRFLPAFSFTDYVKLQMNAFCIL--SD-----SGTITEEASILNLPALNIREAHERPEGMD---AGTLIMSGFKAERVL 333 (385)
T ss_dssp GEEECCCCCHHHHHHHHHHCSEEE--EC-----CTTHHHHHHHTTCCEEECSSSCSCTHHHH---HTCCEECCSSHHHHH
T ss_pred CEEEEcCCCHHHHHHHHHhCcEEE--EC-----CccHHHHHHHcCCCEEEcCCCccchhhhh---cCceEEcCCCHHHHH
Confidence 588887766444467889999987 22 5888889999999999988876 455433 246677776666553
No 36
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=40.23 E-value=88 Score=36.25 Aligned_cols=109 Identities=8% Similarity=0.006 Sum_probs=65.4
Q ss_pred CceeeeeccccccchhccchhhHHHHHHHHHHhcCcccccCCCCeEEEE-EecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 004697 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMI-GGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (736)
Q Consensus 563 ~~l~d~~vkR~~eYKRq~Lnil~~i~r~~~i~~~~~~~~~~~~P~q~If-~GKA~P~y~~aK~iIk~I~~la~~in~dp~ 641 (736)
..++.+-.-|+ +|.-.- ++....++++ . -|. ++-++| .|.+ ++- ....++.+...+ +
T Consensus 440 G~v~Fg~fn~~--~Ki~p~-~l~~WarIL~--~-vP~------s~L~l~~~g~~-~g~--~~~~~~~~~~~G--I----- 497 (631)
T 3q3e_A 440 EVVNIGIASTT--MKLNPY-FLEALKAIRD--R-AKV------KVHFHFALGQS-NGI--THPYVERFIKSY--L----- 497 (631)
T ss_dssp SEEEEEEEECS--TTCCHH-HHHHHHHHHH--H-CSS------EEEEEEEESSC-CGG--GHHHHHHHHHHH--H-----
T ss_pred CeEEEEECCcc--ccCCHH-HHHHHHHHHH--h-CCC------cEEEEEecCCC-chh--hHHHHHHHHHcC--C-----
Confidence 36666666665 788776 6666555543 2 121 344444 4542 221 223334333222 3
Q ss_pred CCCcceEEEEcCCChhHHh--hhcccccccccCCCCCccCCCcchhhhhhcCceeEEeccccc
Q 004697 642 VNSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGAN 702 (736)
Q Consensus 642 ~~~~lkVvFlenY~vslA~--~iv~gaDv~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~ 702 (736)
.+ +|+|++.-. .++ ..+..|||+|.++. +. .||.-+-+|--|.+ +.|+.|..
T Consensus 498 -~~--Rv~F~g~~p--~~e~la~y~~aDIfLDpfp--y~-GgtTtlEALwmGVP-VVTl~G~~ 551 (631)
T 3q3e_A 498 -GD--SATAHPHSP--YHQYLRILHNCDMMVNPFP--FG-NTNGIIDMVTLGLV-GVCKTGAE 551 (631)
T ss_dssp -GG--GEEEECCCC--HHHHHHHHHTCSEEECCSS--SC-CSHHHHHHHHTTCC-EEEECCSS
T ss_pred -Cc--cEEEcCCCC--HHHHHHHHhcCcEEEeCCc--cc-CChHHHHHHHcCCC-EEeccCCc
Confidence 34 688887644 444 56799999999985 65 49999999998875 66888743
No 37
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=35.49 E-value=1.3e+02 Score=33.89 Aligned_cols=135 Identities=13% Similarity=0.039 Sum_probs=81.1
Q ss_pred hcccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEchh
Q 004697 15 LAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEF 94 (736)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEf 94 (736)
+-.+|......++..+.. +.+.+.|...+|++.. +.. ..-|.++.+.-.+++++. ..|+|..+. +=
T Consensus 308 ~~GiP~i~~~~PiG~~~T-~~~l~~la~~~g~~~~-----~~i----~~er~r~~~~l~d~~~~l---~GKrvaI~g-d~ 373 (523)
T 3u7q_B 308 TWKHEVPKLNIPMGLDWT-DEFLMKVSEISGQPIP-----ASL----TKERGRLVDMMTDSHTWL---HGKRFALWG-DP 373 (523)
T ss_dssp TSCCCCCCCCCSCHHHHH-HHHHHHHHHHHCCCCC-----HHH----HHHHHHHHHHHHHHHHHH---TTCEEEEEC-SH
T ss_pred HhCCCeeecCCcCCHHHH-HHHHHHHHHHHCCChh-----HHH----HHHHHHHHHHHHHHHHhc---CCCEEEEEC-Cc
Confidence 336777655555544433 3366677777787652 111 122334444444444443 458888774 32
Q ss_pred ccccchhHHhhcCCc--------------HHHHHHHHHHc----------CCChHHHHh----hhccccCCCCCcccchh
Q 004697 95 LQGRTLTNAIGSLDI--------------QNAYADALNNL----------GHVLEEIAE----QEKDAALGNGGLGRLAS 146 (736)
Q Consensus 95 l~Gr~L~nnl~nLg~--------------~~~~~eaL~~l----------g~~l~~l~~----~E~d~~lgnGGLGrLA~ 146 (736)
..-..|...|..||+ .+.+++.|+++ |-|+.++++ ..+|.-+|++---.+|-
T Consensus 374 ~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~~~pDLlig~s~~k~~a~ 453 (523)
T 3u7q_B 374 DFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSYGKFIQR 453 (523)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHTCCSEEEECTTHHHHHH
T ss_pred hHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHhcCCCEEEECccHHHHHH
Confidence 222344455556774 24456677652 447777765 47999999886556777
Q ss_pred hhHhhhhccCCCeeEEe
Q 004697 147 CFLDSMATLNLPAWGYG 163 (736)
Q Consensus 147 ~~ldS~a~l~~P~~g~G 163 (736)
..+-++..||+|++-+|
T Consensus 454 ~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 454 DTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHCGGGCCCEEECS
T ss_pred HhhcccccCCCceEEec
Confidence 77788999999998777
No 38
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=25.88 E-value=60 Score=29.12 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=27.1
Q ss_pred CceEEeeCCCc---ccccHHHHHHHHHHhcCCChHHHHhhcCce
Q 004697 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (736)
Q Consensus 332 ~~~viHlND~H---palaipElmR~l~d~~gl~~d~A~~i~~~~ 372 (736)
.++.|||.-|. +++++..+ |..+|++.++|++.++..
T Consensus 82 ~~VlVHC~~G~~RS~~~~~ayl----m~~~~~~~~~A~~~v~~~ 121 (144)
T 3ezz_A 82 GRVLVHSQAGISRSATICLAYL----MMKKRVRLEEAFEFVKQR 121 (144)
T ss_dssp CCEEEEESSSSSHHHHHHHHHH----HHHHTCCHHHHHHHHHTT
T ss_pred CeEEEECCCCCChhHHHHHHHH----HHHcCCCHHHHHHHHHHH
Confidence 57899999987 44554444 445789999999877653
No 39
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=23.70 E-value=45 Score=30.11 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=26.9
Q ss_pred CceEEeeCCCc---ccccHHHHHHHHHHhcCCChHHHHhhcCc
Q 004697 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTR 371 (736)
Q Consensus 332 ~~~viHlND~H---palaipElmR~l~d~~gl~~d~A~~i~~~ 371 (736)
.++.|||.-|. +++++..|| ..+|+++++|++.++.
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm----~~~~~~~~~A~~~v~~ 120 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLM----NSEQTSFTSAFSLVKN 120 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHH----HHHCCCHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHH----HHcCCCHHHHHHHHHH
Confidence 47899999998 566655554 4569999999976554
No 40
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=23.55 E-value=58 Score=30.29 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=28.1
Q ss_pred CceEEeeCCCc---ccccHHHHHHHHHHhcCCChHHHHhhcCce
Q 004697 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (736)
Q Consensus 332 ~~~viHlND~H---palaipElmR~l~d~~gl~~d~A~~i~~~~ 372 (736)
.++.|||.-|. +++++..|| ..+|+++++|++.++..
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm----~~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLM----YYQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHH----HHTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHH----HHhCCCHHHHHHHHHHH
Confidence 47899999998 566655555 45799999999877653
Done!