BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004702
(735 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 166/288 (57%), Gaps = 12/288 (4%)
Query: 397 EIKTVTNNYAD--VIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
+++ TNN+ +IG G G VYKG L D VA+K+ + + ++ E + L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSF 91
Query: 455 NRR-NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG----NLSWERRLRITAETAGV 509
R ++V L+G C E +L+Y+++ NG L H++ ++SWE+RL I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL-VPIDAIQNCTVVQGTLGYL 568
L YLH+ IIHRDVKS NILLDEN PK++DFG SK +D VV+GTLGY+
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEI 628
DPEY +LT+KSDVYSFGVVL E+L + A++ P E +LA + S +L +I
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 629 LDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSL 676
+D + + + L++ A +C+++ E+RP+M +V +L+ L L
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 165/288 (57%), Gaps = 12/288 (4%)
Query: 397 EIKTVTNNYAD--VIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
+++ TNN+ +IG G G VYKG L D VA+K+ + + ++ E + L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSF 91
Query: 455 NRR-NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG----NLSWERRLRITAETAGV 509
R ++V L+G C E +L+Y+++ NG L H++ ++SWE+RL I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL-VPIDAIQNCTVVQGTLGYL 568
L YLH+ IIHRDVKS NILLDEN PK++DFG SK + VV+GTLGY+
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEI 628
DPEY +LT+KSDVYSFGVVL E+L + A++ P E +LA + S +L +I
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 629 LDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSL 676
+D + + + L++ A +C+++ E+RP+M +V +L+ L L
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 168/291 (57%), Gaps = 9/291 (3%)
Query: 391 KIFTEEEIKTVTNNYAD--VIGCGGSGNVYKGFLPDRTPVAVKKSKF-VDQAKIDEFINE 447
K F+ E++ ++N+++ ++G GG G VYKG L D T VAVK+ K Q +F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 448 LVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGT----LFEHIHKKGNLSWERRLRIT 503
+ ++ RN++RL G C+ LLVY ++ NG+ L E + L W +R RI
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+A L+YLH + IIHRDVK+ANILLDE V DFG +KL+ V+G
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 564 TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMAL-LSDKPEEERSLAMNFLSS-LK 621
T+G++ PEYL T K ++K+DV+ +GV+L+EL+TG+ A L+ ++ + ++++ LK
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 622 QNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQG 672
+ +L ++D + + ++++++ ++A C ERP M EV L+G
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 165/291 (56%), Gaps = 9/291 (3%)
Query: 391 KIFTEEEIKTVTNNYAD--VIGCGGSGNVYKGFLPDRTPVAVKKSKF-VDQAKIDEFINE 447
K F+ E++ ++N+ + ++G GG G VYKG L D VAVK+ K Q +F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 448 LVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGT----LFEHIHKKGNLSWERRLRIT 503
+ ++ RN++RL G C+ LLVY ++ NG+ L E + L W +R RI
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+A L+YLH + IIHRDVK+ANILLDE V DFG +KL+ V+G
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 564 TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMAL-LSDKPEEERSLAMNFLSS-LK 621
+G++ PEYL T K ++K+DV+ +GV+L+EL+TG+ A L+ ++ + ++++ LK
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 622 QNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQG 672
+ +L ++D + + ++++++ ++A C ERP M EV L+G
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 162/296 (54%), Gaps = 25/296 (8%)
Query: 393 FTEEEIKTVTNNY--------ADVIGCGGSGNVYKGFLPDRTPVAVKK-SKFVD---QAK 440
F+ E+K VTNN+ + +G GG G VYKG++ + T VAVKK + VD +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 441 IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH---KKGNLSWE 497
+F E+ V+ + N+V LLG + LVY ++ NG+L + + LSW
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP--IDAI 555
R +I A +++LH + IHRD+KSANILLDE T K+SDFG ++ +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
+V GT Y+ PE L+ ++T KSD+YSFGVVL+E++TG + + + E + L +
Sbjct: 191 MXSRIV-GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 247
Query: 616 FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
++ + + +D ++ ND + ++ + +A++C+ + +RP +K+V LQ
Sbjct: 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 162/296 (54%), Gaps = 25/296 (8%)
Query: 393 FTEEEIKTVTNNY--------ADVIGCGGSGNVYKGFLPDRTPVAVKK-SKFVD---QAK 440
F+ E+K VTNN+ + +G GG G VYKG++ + T VAVKK + VD +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 441 IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH---KKGNLSWE 497
+F E+ V+ + N+V LLG + LVY ++ NG+L + + LSW
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP--IDAI 555
R +I A +++LH + IHRD+KSANILLDE T K+SDFG ++ +
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
+V GT Y+ PE L+ ++T KSD+YSFGVVL+E++TG + + + E + L +
Sbjct: 185 MXXRIV-GTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 241
Query: 616 FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
++ + + +D ++ ND + ++ + +A++C+ + +RP +K+V LQ
Sbjct: 242 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 162/296 (54%), Gaps = 25/296 (8%)
Query: 393 FTEEEIKTVTNNY--------ADVIGCGGSGNVYKGFLPDRTPVAVKK-SKFVD---QAK 440
F+ E+K VTNN+ + +G GG G VYKG++ + T VAVKK + VD +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 441 IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH---KKGNLSWE 497
+F E+ V+ + N+V LLG + LVY ++ NG+L + + LSW
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP--IDAI 555
R +I A +++LH + IHRD+KSANILLDE T K+SDFG ++ +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
+V GT Y+ PE L+ ++T KSD+YSFGVVL+E++TG + + + E + L +
Sbjct: 191 MXXRIV-GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 247
Query: 616 FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
++ + + +D ++ ND + ++ + +A++C+ + +RP +K+V LQ
Sbjct: 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 156/296 (52%), Gaps = 25/296 (8%)
Query: 393 FTEEEIKTVTNNY--------ADVIGCGGSGNVYKGFLPDRTPVAVKK-SKFVD---QAK 440
F+ E+K VTNN+ + G GG G VYKG++ + T VAVKK + VD +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 441 IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH---KKGNLSWE 497
+F E+ V + N+V LLG + LVY + NG+L + + LSW
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP--IDAI 555
R +I A +++LH + IHRD+KSANILLDE T K+SDFG ++ +
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
+V GT Y PE L+ ++T KSD+YSFGVVL+E++TG + + + E + L +
Sbjct: 182 XXSRIV-GTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 238
Query: 616 FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
++ + + +D + ND + ++ +A++C+ + +RP +K+V LQ
Sbjct: 239 EEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVK--KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
N + IG G G V++ + VAVK + +++EF+ E+ ++ ++ N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKG---NLSWERRLRITAETAGVLSYLHSETN 518
+G + +V E++ G+L+ +HK G L RRL + + A ++YLH+ N
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
PI+HRD+KS N+L+D+ T KV DFG S+L GT ++ PE L+
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK-ASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 579 TDKSDVYSFGVVLVELLT 596
+KSDVYSFGV+L EL T
Sbjct: 217 NEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVK--KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
N + IG G G V++ + VAVK + +++EF+ E+ ++ ++ N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKG---NLSWERRLRITAETAGVLSYLHSETN 518
+G + +V E++ G+L+ +HK G L RRL + + A ++YLH+ N
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
PI+HR++KS N+L+D+ T KV DFG S+L + GT ++ PE L+
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK-ASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 579 TDKSDVYSFGVVLVELLT 596
+KSDVYSFGV+L EL T
Sbjct: 217 NEKSDVYSFGVILWELAT 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 26/225 (11%)
Query: 393 FTEEEIKTVTNN---YADVIGCGGSGNVYKG-FLPDRTPVAVKKSKFVDQA-------KI 441
F + + T+ +N Y IG GG G V+KG + D++ VA+K D K
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN-LSWERRL 500
EF E+ ++ +N N+V+L G L P +V EFV G L+ + K + + W +L
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 501 RITAETAGVLSYLHSETNVPIIHRDVKSANILL---DENCT--PKVSDFGASKLVPIDAI 555
R+ + A + Y+ ++ N PI+HRD++S NI L DEN KV+DFG S+ ++
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSV 180
Query: 556 QNCTVVQGTLGYLDPEYL--QTCKLTDKSDVYSFGVVLVELLTGK 598
+ + + G ++ PE + + T+K+D YSF ++L +LTG+
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 26/225 (11%)
Query: 393 FTEEEIKTVTNN---YADVIGCGGSGNVYKG-FLPDRTPVAVKKSKFVDQA-------KI 441
F + + T+ +N Y IG GG G V+KG + D++ VA+K D K
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN-LSWERRL 500
EF E+ ++ +N N+V+L G L P +V EFV G L+ + K + + W +L
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 501 RITAETAGVLSYLHSETNVPIIHRDVKSANILL---DENCT--PKVSDFGASKLVPIDAI 555
R+ + A + Y+ ++ N PI+HRD++S NI L DEN KV+DFG S+ ++
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSV 180
Query: 556 QNCTVVQGTLGYLDPEYL--QTCKLTDKSDVYSFGVVLVELLTGK 598
+ + + G ++ PE + + T+K+D YSF ++L +LTG+
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 26/225 (11%)
Query: 393 FTEEEIKTVTNN---YADVIGCGGSGNVYKG-FLPDRTPVAVKKSKFVDQA-------KI 441
F + + T+ +N Y IG GG G V+KG + D++ VA+K D K
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN-LSWERRL 500
EF E+ ++ +N N+V+L G L P +V EFV G L+ + K + + W +L
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 501 RITAETAGVLSYLHSETNVPIIHRDVKSANILL---DENCT--PKVSDFGASKLVPIDAI 555
R+ + A + Y+ ++ N PI+HRD++S NI L DEN KV+DF S+ ++
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSV 180
Query: 556 QNCTVVQGTLGYLDPEYL--QTCKLTDKSDVYSFGVVLVELLTGK 598
+ + + G ++ PE + + T+K+D YSF ++L +LTG+
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 14/199 (7%)
Query: 408 VIGCGGSGNVYKGFLPDRT-----PVAVK--KSKFVDQAKIDEFINELVVVLQINRRNVV 460
VIG G G VYKG L + PVA+K K+ + ++ ++D F+ E ++ Q + N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHNII 109
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKK-GNLSWERRLRITAETAGVLSYLHSETNV 519
RL G + + +++ E++ NG L + + +K G S L++ G+ + + N+
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFS---VLQLVGMLRGIAAGMKYLANM 166
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCK 577
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 578 LTDKSDVYSFGVVLVELLT 596
T SDV+SFG+V+ E++T
Sbjct: 227 FTSASDVWSFGIVMWEVMT 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 12/210 (5%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+ IG G G V+ G+ ++ VA+K K ++ D+FI E V+++++ +V+L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLY 88
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G CLE LV+EF+ +G L +++ ++G + E L + + ++YL +I
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N L+ EN KVSDFG ++ V D + T + + + PE + + KS
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 583 DVYSFGVVLVELLT-GKMALLSDKPEEERS 611
DV+SFGV++ E+ + GK+ P E RS
Sbjct: 206 DVWSFGVLMWEVFSEGKI------PYENRS 229
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 117/211 (55%), Gaps = 14/211 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+ IG G G V+ G+ ++ VA+K + ++ ++FI E V+++++ +V+L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 464 GCCLETQVPL-LVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
G CLE Q P+ LV+EF+ +G L +++ ++G + E L + + ++YL + +
Sbjct: 69 GVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---V 124
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
IHRD+ + N L+ EN KVSDFG ++ V D + T + + + PE + + K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 582 SDVYSFGVVLVELLT-GKMALLSDKPEEERS 611
SDV+SFGV++ E+ + GK+ P E RS
Sbjct: 185 SDVWSFGVLMWEVFSEGKI------PYENRS 209
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 149/302 (49%), Gaps = 29/302 (9%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + +L S+
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + D++ N T + + ++ E L
Sbjct: 154 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 574 QTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRI 633
QT K T KSDV+SFGV+L EL+T D + ++ + L+ RLL+
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-----LQGRRLLQ------ 259
Query: 634 VNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQYYLRDNVESNGV 693
+ L EV +C + E RP+ E+ + S G++Y+ N V
Sbjct: 260 -PEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIFSTFI-GEHYVHVNATYVNV 314
Query: 694 QE 695
+E
Sbjct: 315 KE 316
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 149/302 (49%), Gaps = 29/302 (9%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + +L S+
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + D++ N T + + ++ E L
Sbjct: 154 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 574 QTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRI 633
QT K T KSDV+SFGV+L EL+T D + ++ + L+ RLL+
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-----LQGRRLLQ------ 259
Query: 634 VNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQYYLRDNVESNGV 693
+ L EV +C + E RP+ E+ + S G++Y+ N V
Sbjct: 260 -PEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIFSTFI-GEHYVHVNATYVNV 314
Query: 694 QE 695
+E
Sbjct: 315 KE 316
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + +L S+
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + D++ N T + + ++ E L
Sbjct: 212 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 12/210 (5%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+ IG G G V+ G+ ++ VA+K + ++ D FI E V+++++ +V+L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLY 68
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G CLE LV+EF+ +G L +++ ++G + E L + + ++YL +I
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N L+ EN KVSDFG ++ V D + T + + + PE + + KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 583 DVYSFGVVLVELLT-GKMALLSDKPEEERS 611
DV+SFGV++ E+ + GK+ P E RS
Sbjct: 186 DVWSFGVLMWEVFSEGKI------PYENRS 209
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 12/210 (5%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+ IG G G V+ G+ ++ VA+K + ++ D FI E V+++++ +V+L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLY 71
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G CLE LV+EF+ +G L +++ ++G + E L + + ++YL +I
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N L+ EN KVSDFG ++ V D + T + + + PE + + KS
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 583 DVYSFGVVLVELLT-GKMALLSDKPEEERS 611
DV+SFGV++ E+ + GK+ P E RS
Sbjct: 189 DVWSFGVLMWEVFSEGKI------PYENRS 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 12/210 (5%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+ IG G G V+ G+ ++ VA+K + ++ D FI E V+++++ +V+L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLY 66
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G CLE LV+EF+ +G L +++ ++G + E L + + ++YL +I
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N L+ EN KVSDFG ++ V D + T + + + PE + + KS
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 583 DVYSFGVVLVELLT-GKMALLSDKPEEERS 611
DV+SFGV++ E+ + GK+ P E RS
Sbjct: 184 DVWSFGVLMWEVFSEGKI------PYENRS 207
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + +L S+
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + D++ N T + + ++ E L
Sbjct: 158 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + +L S+
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + D++ N T + + ++ E L
Sbjct: 153 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + +L S+
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + D++ N T + + ++ E L
Sbjct: 151 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + +L S+
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + D++ N T + + ++ E L
Sbjct: 153 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHRD+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 196 FGVLLWEIATYGMS 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHRD+
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 198 FGVLLWEIATYGMS 211
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 198 FGVLLWEIATYGMS 211
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHRD+
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 198 FGVLLWEIATYGMS 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHRD+
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 196 FGVLLWEIATYGMS 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 198 FGVLLWEIATYGMS 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHRD+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 203 FGVLLWEIATYGMS 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHRD+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 196 FGVLLWEIATYGMS 209
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 152 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 12/210 (5%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+ IG G G V+ G+ ++ VA+K + ++ D FI E V+++++ +V+L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLY 69
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G CLE LV EF+ +G L +++ ++G + E L + + ++YL +I
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N L+ EN KVSDFG ++ V D + T + + + PE + + KS
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 583 DVYSFGVVLVELLT-GKMALLSDKPEEERS 611
DV+SFGV++ E+ + GK+ P E RS
Sbjct: 187 DVWSFGVLMWEVFSEGKI------PYENRS 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 134/268 (50%), Gaps = 20/268 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 469 TQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + ++ + I +TA + YLH+++ IIHRD+K
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 147
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQ---TCKLTDKSD 583
S NI L E+ T K+ DFG A++ + G++ ++ PE ++ + + +SD
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 584 VYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLK 643
VY+FG+VL EL+TG++ S+ ++ + M SL + L ++ N K
Sbjct: 208 VYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPD-LSKVRSN---------CPK 256
Query: 644 EVAKLAARCISVRGEERPTMKEVSLELQ 671
+ +L A C+ + +ERP+ + E++
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 203 FGVLLWEIATYGMS 216
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 200 FGVLLWEIATYGMS 213
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 171 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 150
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 210
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 211 FGVLLWEIATYGMS 224
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 145 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 138
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 199 FGVLLWEIATYGMS 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 133/268 (49%), Gaps = 20/268 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 469 TQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + ++ + I +TA + YLH+++ IIHRD+K
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 147
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQ---TCKLTDKSD 583
S NI L E+ T K+ DFG A++ + G++ ++ PE ++ + + +SD
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 584 VYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLK 643
VY+FG+VL EL+TG++ S+ ++ + M SL + L ++ N K
Sbjct: 208 VYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPD-LSKVRSN---------CPK 256
Query: 644 EVAKLAARCISVRGEERPTMKEVSLELQ 671
+ +L A C+ + +ERP+ + E++
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 200 FGVLLWEIATYGMS 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 203 FGVLLWEIATYGMS 216
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 138
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 199 FGVLLWEIATYGMS 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 200 FGVLLWEIATYGMS 213
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 152 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 203 FGVLLWEIATYGMS 216
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 148 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 153 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 35/304 (11%)
Query: 389 KAKIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFVDQAKID- 442
+ +I E E+K V V+G G G VYKG ++P+ + PVA+K K +
Sbjct: 8 QLRILKETELKRVK-----VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 443 EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLR 501
EF++E +++ ++ ++VRLLG CL + LV + + +G L E++H+ K N+ + L
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLN 121
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQ-NCTV 560
+ A + YL ++HRD+ + N+L+ K++DFG ++L+ D + N
Sbjct: 122 WCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 178
Query: 561 VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSL 620
+ + ++ E + K T +SDV+S+GV + EL+T P E + L
Sbjct: 179 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL 238
Query: 621 KQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNG 680
Q + I +V + +C + + RP KE++ E + +
Sbjct: 239 PQPPICTI---------------DVYMVMVKCWMIDADSRPKFKELAAEFS---RMARDP 280
Query: 681 QYYL 684
Q YL
Sbjct: 281 QRYL 284
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 153 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 142
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 203 FGVLLWEIATYGMS 216
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 198 FGVLLWEIATYGMS 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 198 FGVLLWEIATYGMS 211
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 151 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 150 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 141
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 202 FGVLLWEIATYGMS 215
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 404 NYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRN 458
++ +VIG G G VY G L D + AVK ++ D ++ +F+ E +++ + N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 459 VVRLLGCCLETQ-VPLLVYEFVGNGTLFEHI-HKKGNLSWERRLRITAETAGVLSYLHSE 516
V+ LLG CL ++ PL+V ++ +G L I ++ N + + + + A + YL S+
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLV---PIDAIQNCTVVQGTLGYLDPEYL 573
+HRD+ + N +LDE T KV+DFG ++ + ++ N T + + ++ E L
Sbjct: 172 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 574 QTCKLTDKSDVYSFGVVLVELLT 596
QT K T KSDV+SFGV+L EL+T
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMT 251
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + +S L + + + + YL + IHR++
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNL 344
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 404
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 405 FGVLLWEIATYGMS 418
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 133/268 (49%), Gaps = 20/268 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 469 TQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + ++ + I +TA + YLH+++ IIHRD+K
Sbjct: 80 PQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 135
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQ---TCKLTDKSD 583
S NI L E+ T K+ DFG A+ + G++ ++ PE ++ + + +SD
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 584 VYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLK 643
VY+FG+VL EL+TG++ S+ ++ + M SL + L ++ N K
Sbjct: 196 VYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPD-LSKVRSN---------CPK 244
Query: 644 EVAKLAARCISVRGEERPTMKEVSLELQ 671
+ +L A C+ + +ERP+ + E++
Sbjct: 245 RMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 35/304 (11%)
Query: 389 KAKIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFVDQAKID- 442
+ +I E E+K V V+G G G VYKG ++P+ + PVA+K K +
Sbjct: 31 QLRILKETELKRVK-----VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 85
Query: 443 EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLR 501
EF++E +++ ++ ++VRLLG CL + LV + + +G L E++H+ K N+ + L
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLLLN 144
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQ-NCTV 560
+ A + YL ++HRD+ + N+L+ K++DFG ++L+ D + N
Sbjct: 145 WCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
Query: 561 VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSL 620
+ + ++ E + K T +SDV+S+GV + EL+T P E + L
Sbjct: 202 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL 261
Query: 621 KQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNG 680
Q + I +V + +C + + RP KE++ E + +
Sbjct: 262 PQPPICTI---------------DVYMVMVKCWMIDADSRPKFKELAAEFS---RMARDP 303
Query: 681 QYYL 684
Q YL
Sbjct: 304 QRYL 307
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 142/309 (45%), Gaps = 40/309 (12%)
Query: 377 QELSKLHGQSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFV 436
QE +K+ + + + E E V + IG G G VYKG VAVK K V
Sbjct: 14 QEKNKIRPRGQRDSSYYWEIEASEVM--LSTRIGSGSFGTVYKGKW--HGDVAVKILKVV 69
Query: 437 DQA--KIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH-KKGN 493
D + F NE+ V+ + N++ +G + + + V ++ +L++H+H ++
Sbjct: 70 DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETK 128
Query: 494 LSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFG-ASKLVPI 552
+ + I +TA + YLH++ IIHRD+KS NI L E T K+ DFG A+
Sbjct: 129 FQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185
Query: 553 DAIQNCTVVQGTLGYLDPEYLQTC---KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEE 609
Q G++ ++ PE ++ + +SDVYS+G+VL EL+TG++ ++
Sbjct: 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
Query: 610 ------RSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTM 663
R A LS L +N K + +L A C+ EERP
Sbjct: 246 IIFMVGRGYASPDLSKLYKN-----------------CPKAMKRLVADCVKKVKEERPLF 288
Query: 664 KEV--SLEL 670
++ S+EL
Sbjct: 289 PQILSSIEL 297
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 29/308 (9%)
Query: 380 SKLHGQSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQA 439
S + Q +K E E+ T + +G G G V+ G+ T VAVK K +
Sbjct: 2 SHMQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS 61
Query: 440 KIDEFINELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSW 496
D F+ E ++ Q+ + +VRL TQ P+ ++ E++ NG+L + + L+
Sbjct: 62 P-DAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTI 118
Query: 497 ERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQ 556
+ L + A+ A ++++ IHRD+++ANIL+ + + K++DFG ++L+ +
Sbjct: 119 NKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 175
Query: 557 NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAM 614
+ + + PE + T KSDV+SFG++L E++T G++ PE ++L
Sbjct: 176 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 615 NFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRL 674
+ R+V N + E+ +L C R E+RPT + L+
Sbjct: 236 GY---------------RMVRPDNCPE--ELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 278
Query: 675 SLMSNGQY 682
+ + GQY
Sbjct: 279 T-ATEGQY 285
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 25/293 (8%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHR++
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNL 383
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 443
Query: 587 FGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVA 646
FGV+L E+ T M+ + +++ E+L+ + + ++V
Sbjct: 444 FGVLLWEIAT---------------YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 488
Query: 647 KLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQYYLRDNVESNGVQETEYF 699
+L C +RP+ E+ + S + D VE +E YF
Sbjct: 489 ELMRACWQWNPSDRPSFAEIHQAFETMFQESS-----ISDEVEKELGKENLYF 536
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY+G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
++ EF+ G L +++ + + ++ L + + + + YL + IHR++
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNL 341
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L K + KSDV++
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 401
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 402 FGVLLWEIATYGMS 415
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A++ + G++ ++ PE ++ DK
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNPYSF 188
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 238
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 239 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 120/225 (53%), Gaps = 19/225 (8%)
Query: 382 LHGQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSK 434
+ G + +A +I E E++ V V+G G G VYKG ++PD + PVA+K +
Sbjct: 1 MSGAAPNQALLRILKETELRKVK-----VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLR 55
Query: 435 FVDQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KG 492
K + E ++E V+ + V RLLG CL + V L V + + G L +H+ + +G
Sbjct: 56 ENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRG 114
Query: 493 NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPI 552
L + L + A +SYL +V ++HRD+ + N+L+ K++DFG ++L+ I
Sbjct: 115 RLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
Query: 553 DAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
D + + + + ++ E + + T +SDV+S+GV + EL+T
Sbjct: 172 DETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 29/303 (9%)
Query: 385 QSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEF 444
Q +K E E+ T + +G G G V+ G+ T VAVK K + D F
Sbjct: 5 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAF 63
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLR 501
+ E ++ Q+ + +VRL TQ P+ ++ E++ NG+L + + L+ + L
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
+ A+ A ++++ IHRD+++ANIL+ + + K++DFG ++L+ +
Sbjct: 122 MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 562 QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSS 619
+ + + PE + T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 179 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--- 235
Query: 620 LKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSN 679
R+V N + E+ +L C R E+RPT + L+ + +
Sbjct: 236 ------------RMVRPDNCPE--ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT-ATE 280
Query: 680 GQY 682
GQY
Sbjct: 281 GQY 283
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 96 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 151
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A++ + G++ ++ PE + ++ DK
Sbjct: 152 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 208
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 258
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 259 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 292
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 159
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A++ + G++ ++ PE + ++ DK
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 216
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 266
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 267 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 29/303 (9%)
Query: 385 QSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEF 444
Q +K E E+ T + +G G G V+ G+ T VAVK K + D F
Sbjct: 3 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAF 61
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLR 501
+ E ++ Q+ + +VRL TQ P+ ++ E++ NG+L + + L+ + L
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
+ A+ A ++++ IHRD+++ANIL+ + + K++DFG ++L+ +
Sbjct: 120 MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 176
Query: 562 QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSS 619
+ + + PE + T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--- 233
Query: 620 LKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSN 679
R+V N + E+ +L C R E+RPT + L+ + +
Sbjct: 234 ------------RMVRPDNCPE--ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT-ATE 278
Query: 680 GQY 682
GQY
Sbjct: 279 GQY 281
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 397 EIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFI----NELVVVL 452
EI ++IG GG G VY+ F VAVK ++ I + I E +
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 453 QINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSY 512
+ N++ L G CL+ LV EF G L + K + + + + A ++Y
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNY 120
Query: 513 LHSETNVPIIHRDVKSANILLDE--------NCTPKVSDFGASKLVPIDAIQNCTVVQ-- 562
LH E VPIIHRD+KS+NIL+ + N K++DFG ++ T +
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAA 175
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
G ++ PE ++ + SDV+S+GV+L ELLTG++
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 78 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 133
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A+ + G++ ++ PE + ++ DK
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 190
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 240
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 241 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 274
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 385 QSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEF 444
Q +K E E+ T + +G G G V+ G+ T VAVK K + D F
Sbjct: 3 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAF 61
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLR 501
+ E ++ Q+ + +VRL TQ P+ ++ E++ NG+L + + L+ + L
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
+ A+ A ++++ IHRD+++ANIL+ + + K++DFG ++L+ +
Sbjct: 120 MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 176
Query: 562 QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSS 619
+ + + PE + T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--- 233
Query: 620 LKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPT 662
R+V N + E+ +L C R E+RPT
Sbjct: 234 ------------RMVRPDNCPE--ELYQLMRLCWKERPEDRPT 262
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 136
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A+ + G++ ++ PE + ++ DK
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 193
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 243
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 244 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 385 QSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEF 444
Q +K E E+ T + +G G G V+ G+ T VAVK K + D F
Sbjct: 2 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAF 60
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLR 501
+ E ++ Q+ + +VRL TQ P+ ++ E++ NG+L + + L+ + L
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
+ A+ A ++++ IHRD+++ANIL+ + + K++DFG ++L+ +
Sbjct: 119 MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 175
Query: 562 QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSS 619
+ + + PE + T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 176 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--- 232
Query: 620 LKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPT 662
R+V N + E+ +L C R E+RPT
Sbjct: 233 ------------RMVRPDNCPE--ELYQLMRLCWKERPEDRPT 261
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A+ + G++ ++ PE + ++ DK
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 188
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 238
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 239 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 136
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A+ + G++ ++ PE + ++ DK
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 193
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 243
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 244 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 103 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 158
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A+ + G++ ++ PE + ++ DK
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 215
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 265
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 266 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 299
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 29/293 (9%)
Query: 395 EEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
E E+ T + +G G G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 455 NRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLS 511
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++
Sbjct: 66 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
++ IHRD+++ANIL+ + + K++DFG ++L+ + + + + PE
Sbjct: 124 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEIL 629
+ T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------- 227
Query: 630 DNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQY 682
R+V N + E+ +L C R E+RPT + L+ + + GQY
Sbjct: 228 --RMVRPDNCPE--ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT-ATEGQY 275
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 159
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A+ + G++ ++ PE + ++ DK
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 216
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 266
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 267 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 32/277 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
IG G G VYKG V + ++ F NE+ V+ + N++ +G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
Q+ + V ++ +L+ H+H + + + I +TA + YLH+++ IIHRD+K
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 528 SANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK----- 581
S NI L E+ T K+ DFG A+ + G++ ++ PE + ++ DK
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNPYSF 188
Query: 582 -SDVYSFGVVLVELLTGKMAL--LSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
SDVY+FG+VL EL+TG++ ++++ + + +LS D V
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP----------DLSKVRSNC 238
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV--SLELQGR 673
+ +K +L A C+ + +ERP ++ S+EL R
Sbjct: 239 PKAMK---RLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 141/292 (48%), Gaps = 31/292 (10%)
Query: 397 EIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINR 456
E+ T + +G G +G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 67
Query: 457 RNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLSYL 513
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++++
Sbjct: 68 QRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 514 HSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL 573
IHRD+++ANIL+ + + K++DFG ++L+ + + + PE +
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAI 182
Query: 574 QTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEILDN 631
T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--------------- 227
Query: 632 RIVNDGN-KQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQY 682
R+V N ++L ++ +L C R E+RPT + L+ + + GQY
Sbjct: 228 RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFT-ATEGQY 275
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 395 EEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
E E+ T + +G G G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 74
Query: 455 NRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLS 511
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++
Sbjct: 75 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
++ IHRD+++ANIL+ + + K++DFG ++L+ + + + + PE
Sbjct: 133 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEIL 629
+ T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------- 236
Query: 630 DNRIVNDGNKQQLKEVAKLAARCISVRGEERPT 662
R+V N + E+ +L C R E+RPT
Sbjct: 237 --RMVRPDNCPE--ELYQLMRLCWKERPEDRPT 265
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 22/223 (9%)
Query: 471 VPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
+P +V E+V TL + +H +G ++ +R + + A+ L++ H IIHRDVK AN
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 531 ILLDENCTPKVSDFGASKLVPI--DAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
I++ KV DFG ++ + +++ V GT YL PE + + +SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFL------SSLKQNRLLEILDNRIV-----NDG 637
VL E+LTG+ D P+ S+A + S + L LD ++ N
Sbjct: 207 CVLYEVLTGEPPFTGDSPD---SVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 638 NKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNG 680
N+ Q A++ A + V E P +V + + R SL+S+
Sbjct: 264 NRYQT--AAEMRADLVRVHNGEPPEAPKVLTDAE-RTSLLSSA 303
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 115/222 (51%), Gaps = 16/222 (7%)
Query: 385 QSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFL--PDR--TPVAVK--KSKFVDQ 438
+ + FT E I+ + +IG G SG V G L P + PVA+K K+ + ++
Sbjct: 34 EPGRAGRSFTRE-IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER 92
Query: 439 AKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL--FEHIHKKGNLSW 496
+ D F++E ++ Q + N++RL G ++ ++V E++ NG+L F H G +
Sbjct: 93 QRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTI 150
Query: 497 ERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQ 556
+++ GV + + +++ +HRD+ + N+L+D N KVSDFG S+++ D
Sbjct: 151 ---MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 557 NCTVVQGTLG--YLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
T G + + PE + + SDV+SFGVV+ E+L
Sbjct: 208 AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 395 EEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
E E+ T + +G G G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 455 NRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLS 511
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++
Sbjct: 66 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
++ IHRD+++ANIL+ + + K++DFG ++L+ + + + + PE
Sbjct: 124 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEIL 629
+ T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------- 227
Query: 630 DNRIVNDGNKQQLKEVAKLAARCISVRGEERPT 662
R+V N + E+ +L C R E+RPT
Sbjct: 228 --RMVRPDNCPE--ELYQLMRLCWKERPEDRPT 256
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 395 EEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
E E+ T + +G G G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 67
Query: 455 NRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLS 511
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++
Sbjct: 68 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
++ IHRD+++ANIL+ + + K++DFG ++L+ + + + + PE
Sbjct: 126 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEIL 629
+ T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------- 229
Query: 630 DNRIVNDGNKQQLKEVAKLAARCISVRGEERPT 662
R+V N + E+ +L C R E+RPT
Sbjct: 230 --RMVRPDNCPE--ELYQLMRLCWKERPEDRPT 258
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 115/222 (51%), Gaps = 16/222 (7%)
Query: 385 QSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFL--PDR--TPVAVK--KSKFVDQ 438
+ + FT E I+ + +IG G SG V G L P + PVA+K K+ + ++
Sbjct: 34 EPGRAGRSFTRE-IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER 92
Query: 439 AKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL--FEHIHKKGNLSW 496
+ D F++E ++ Q + N++RL G ++ ++V E++ NG+L F H G +
Sbjct: 93 QRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTI 150
Query: 497 ERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQ 556
+++ GV + + +++ +HRD+ + N+L+D N KVSDFG S+++ D
Sbjct: 151 ---MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 557 NCTVVQGTLG--YLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
T G + + PE + + SDV+SFGVV+ E+L
Sbjct: 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G VY G + K+ D +++EF+ E V+ +I N+V+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 469 TQVPLLVYEFVGNGTLFEHIHK--KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+V E++ G L +++ + + ++ L + + + + YL + IHRD+
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRDL 156
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ EN KV+DFG S+L+ D + + + PE L + KSDV++
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWA 216
Query: 587 FGVVLVELLTGKMA 600
FGV+L E+ T M+
Sbjct: 217 FGVLLWEIATYGMS 230
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 395 EEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
E E+ T + +G G G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 455 NRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLS 511
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++
Sbjct: 66 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
++ IHRD+++ANIL+ + + K++DFG ++L+ + + + + PE
Sbjct: 124 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEIL 629
+ T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------- 227
Query: 630 DNRIVNDGNKQQLKEVAKLAARCISVRGEERPT 662
R+V N + E+ +L C R E+RPT
Sbjct: 228 --RMVRPDNCPE--ELYQLMRLCWKERPEDRPT 256
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 406 ADVIGCGGSGNVYKGFLPDRTPVAVK---KSKFVDQAKIDE----FINELVVVLQINRRN 458
D +G GG VY L + T + +K K+ F+ + +E F E+ Q++ +N
Sbjct: 16 VDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 459 VVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETN 518
+V ++ E LV E++ TL E+I G LS + + T + + + H +
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---D 129
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
+ I+HRD+K NIL+D N T K+ DFG +K + ++ V GT+ Y PE +
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 579 TDKSDVYSFGVVLVELLTGK 598
+ +D+YS G+VL E+L G+
Sbjct: 190 DECTDIYSIGIVLYEMLVGE 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 395 EEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
E E+ T + +G G G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 60
Query: 455 NRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLS 511
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++
Sbjct: 61 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
++ IHRD+++ANIL+ + + K++DFG ++L+ + + + + PE
Sbjct: 119 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEIL 629
+ T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------- 222
Query: 630 DNRIVNDGNKQQLKEVAKLAARCISVRGEERPT 662
R+V N + E+ +L C R E+RPT
Sbjct: 223 --RMVRPDNCPE--ELYQLMRLCWKERPEDRPT 251
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 9/205 (4%)
Query: 395 EEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
E E+ T + +G G G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 66
Query: 455 NRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLS 511
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++
Sbjct: 67 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
++ IHRD+++ANIL+ + + K++DFG ++L+ + + + + PE
Sbjct: 125 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLT 596
+ T KSDV+SFG++L E++T
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 471 VPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
+P +V E+V TL + +H +G ++ +R + + A+ L++ H IIHRDVK AN
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 531 ILLDENCTPKVSDFGASKLVPI--DAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
IL+ KV DFG ++ + +++ V GT YL PE + + +SDVYS G
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 589 VVLVELLTGKMALLSDKP 606
VL E+LTG+ D P
Sbjct: 207 CVLYEVLTGEPPFTGDSP 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 471 VPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
+P +V E+V TL + +H +G ++ +R + + A+ L++ H IIHRDVK AN
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 531 ILLDENCTPKVSDFGASKLVPI--DAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
I++ KV DFG ++ + +++ V GT YL PE + + +SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 589 VVLVELLTGKMALLSDKP 606
VL E+LTG+ D P
Sbjct: 207 CVLYEVLTGEPPFTGDSP 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 471 VPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
+P +V E+V TL + +H +G ++ +R + + A+ L++ H IIHRDVK AN
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 531 ILLDENCTPKVSDFGASKLVPI--DAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
I++ KV DFG ++ + +++ V GT YL PE + + +SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 589 VVLVELLTGKMALLSDKP 606
VL E+LTG+ D P
Sbjct: 207 CVLYEVLTGEPPFTGDSP 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V G + VA+K K ++ DEFI E V++ ++ +V+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
+ ++ E++ NG L ++ + + ++ L + + + YL S+ +HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 131
Query: 528 SANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+ N L+++ KVSDFG S+ V D + + + + PE L K + KSD+++F
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 191
Query: 588 GVVLVELLT-GKM 599
GV++ E+ + GKM
Sbjct: 192 GVLMWEIYSLGKM 204
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V G + VA+K K ++ DEFI E V++ ++ +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
+ ++ E++ NG L ++ + + ++ L + + + YL S+ +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 147
Query: 528 SANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+ N L+++ KVSDFG S+ V D + + + + PE L K + KSD+++F
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 588 GVVLVELLT-GKM 599
GV++ E+ + GKM
Sbjct: 208 GVLMWEIYSLGKM 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 471 VPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
+P +V E+V TL + +H +G ++ +R + + A+ L++ H IIHRDVK AN
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 531 ILLDENCTPKVSDFGASKLVPI--DAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
I++ KV DFG ++ + +++ V GT YL PE + + +SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 589 VVLVELLTGKMALLSDKP 606
VL E+LTG+ D P
Sbjct: 207 CVLYEVLTGEPPFTGDSP 224
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 471 VPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
+P +V E+V TL + +H +G ++ +R + + A+ L++ H IIHRDVK AN
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 163
Query: 531 ILLDENCTPKVSDFGASKLVPI--DAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
I++ KV DFG ++ + +++ V GT YL PE + + +SDVYS G
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 223
Query: 589 VVLVELLTGKMALLSDKP 606
VL E+LTG+ D P
Sbjct: 224 CVLYEVLTGEPPFTGDSP 241
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V G + VA+K K ++ DEFI E V++ ++ +V+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
+ ++ E++ NG L ++ + + ++ L + + + YL S+ +HRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 138
Query: 528 SANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+ N L+++ KVSDFG S+ V D + + + + PE L K + KSD+++F
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 198
Query: 588 GVVLVELLT-GKM 599
GV++ E+ + GKM
Sbjct: 199 GVLMWEIYSLGKM 211
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V G + VA+K K ++ DEFI E V++ ++ +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
+ ++ E++ NG L ++ + + ++ L + + + YL S+ +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 132
Query: 528 SANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+ N L+++ KVSDFG S+ V D + + + + PE L K + KSD+++F
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 588 GVVLVELLT-GKM 599
GV++ E+ + GKM
Sbjct: 193 GVLMWEIYSLGKM 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V G + VA+K K ++ DEFI E V++ ++ +V+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
+ ++ E++ NG L ++ + + ++ L + + + YL S+ +HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 127
Query: 528 SANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+ N L+++ KVSDFG S+ V D + + + + PE L K + KSD+++F
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 187
Query: 588 GVVLVELLT-GKM 599
GV++ E+ + GKM
Sbjct: 188 GVLMWEIYSLGKM 200
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V G + VA+K K ++ DEFI E V++ ++ +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
+ ++ E++ NG L ++ + + ++ L + + + YL S+ +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 132
Query: 528 SANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+ N L+++ KVSDFG S+ V D + + + + PE L K + KSD+++F
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 588 GVVLVELLT-GKM 599
GV++ E+ + GKM
Sbjct: 193 GVLMWEIYSLGKM 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 395 EEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
E E+ T + +G G G V+ G+ T VAVK K + D F+ E ++ Q+
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 61
Query: 455 NRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKG--NLSWERRLRITAETAGVLS 511
+ +VRL TQ P+ ++ E++ NG+L + + L+ + L + A+ A ++
Sbjct: 62 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
++ IHR++++ANIL+ + + K++DFG ++L+ + + + + PE
Sbjct: 120 FIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEIL 629
+ T KSDV+SFG++L E++T G++ PE ++L +
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------------- 223
Query: 630 DNRIVNDGNKQQLKEVAKLAARCISVRGEERPT 662
R+V N + E+ +L C R E+RPT
Sbjct: 224 --RMVRPDNCPE--ELYQLMRLCWKERPEDRPT 252
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 407 DVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
+V+G G G V K + VA+K+ + +++ FI EL + ++N N+V+L G C
Sbjct: 14 EVVGRGAFGVVCKAKWRAKD-VAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 467 LETQVPLLVYEFVGNGTLFEHIHKKGNLSW---ERRLRITAETAGVLSYLHSETNVPIIH 523
L LV E+ G+L+ +H L + + + + ++YLHS +IH
Sbjct: 71 LNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 524 RDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+K N+LL T K+ DFG + D + T +G+ ++ PE + ++K
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+S+G++L E++T + KP +E R++ + N K
Sbjct: 185 DVFSWGIILWEVITRR------KPFDE--------IGGPAFRIMWAVHNGTRPPLIKNLP 230
Query: 643 KEVAKLAARCISVRGEERPTMKEV 666
K + L RC S +RP+M+E+
Sbjct: 231 KPIESLMTRCWSKDPSQRPSMEEI 254
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 129/257 (50%), Gaps = 23/257 (8%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G+ + T VAVK K + F+ E ++ + +VRL +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 469 TQVPLLVYEFVGNGTLFEHIH--KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ ++ EF+ G+L + + + G + + + +A+ A ++Y+ + IHRD+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 135
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++AN+L+ E+ K++DFG ++++ + + + + PE + T KS+V+S
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 587 FGVVLVELLT-GKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEV 645
FG++L E++T GK+ P R+ A + +S+L Q + ++N +L ++
Sbjct: 196 FGILLYEIVTYGKI------PYPGRTNA-DVMSALSQGYRMPRMEN------CPDELYDI 242
Query: 646 AKLAARCISVRGEERPT 662
K+ C + EERPT
Sbjct: 243 MKM---CWKEKAEERPT 256
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V G + VA+K K ++ DEFI E V++ ++ +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 469 TQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
+ ++ E++ NG L ++ + + ++ L + + + YL S+ +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 147
Query: 528 SANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+ N L+++ KVSDFG S+ V D + + + + PE L K + KSD+++F
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 588 GVVLVELLT-GKM 599
GV++ E+ + GKM
Sbjct: 208 GVLMWEIYSLGKM 220
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 407 DVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
+V+G G G V K + VA+K+ + +++ FI EL + ++N N+V+L G C
Sbjct: 15 EVVGRGAFGVVCKAKWRAKD-VAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 467 LETQVPLLVYEFVGNGTLFEHIHKKGNLSW---ERRLRITAETAGVLSYLHSETNVPIIH 523
L LV E+ G+L+ +H L + + + + ++YLHS +IH
Sbjct: 72 LNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 524 RDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+K N+LL T K+ DFG + D + T +G+ ++ PE + ++K
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+S+G++L E++T + KP +E R++ + N K
Sbjct: 186 DVFSWGIILWEVITRR------KPFDE--------IGGPAFRIMWAVHNGTRPPLIKNLP 231
Query: 643 KEVAKLAARCISVRGEERPTMKEV 666
K + L RC S +RP+M+E+
Sbjct: 232 KPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 27/262 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF---VDQAKID-EFINELVVVLQINRRNVVRLLG 464
+G G GNVY R + K F +++A ++ + E+ + + N++RL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
+ L+ E+ GT++ + K +R E A LSY HS+ +IHR
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHR 129
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+K N+LL K++DFG S P T + GTL YL PE ++ +K D+
Sbjct: 130 DIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGRMHDEKVDL 186
Query: 585 YSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKE 644
+S GV+ E L GK P E A + + K+ +E V +G +
Sbjct: 187 WSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTEGARD---- 232
Query: 645 VAKLAARCISVRGEERPTMKEV 666
L +R + +RP ++EV
Sbjct: 233 ---LISRLLKHNPSQRPMLREV 251
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 128/257 (49%), Gaps = 23/257 (8%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G+ + T VAVK K + F+ E ++ + +VRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 469 TQVPLLVYEFVGNGTLFEHIH--KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ ++ E++ G+L + + + G + + + +A+ A ++Y+ + IHRD+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 136
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++AN+L+ E+ K++DFG ++++ + + + + PE + T KSDV+S
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 587 FGVVLVELLT-GKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEV 645
FG++L E++T GK+ P R+ A + +++L Q + ++N +L ++
Sbjct: 197 FGILLYEIVTYGKI------PYPGRTNA-DVMTALSQGYRMPRVEN------CPDELYDI 243
Query: 646 AKLAARCISVRGEERPT 662
K+ C + EERPT
Sbjct: 244 MKM---CWKEKAEERPT 257
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 17 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 129 R---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSS---RRTTLSGTLDYLPPEMIEGR 182
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 232
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 233 GARD-------LISRLLKHNPSQRPMLREV 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 16 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 128 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 181
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 231
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 232 GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 21 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 133 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEXIEGR 186
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 236
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 237 GARD-------LISRLLKHNPSQRPXLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 19 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 131 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 184
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 234
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 235 GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 21 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 133 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 186
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 236
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 237 GARD-------LISRLLKHNPSQRPMLREV 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 15 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 127 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 180
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 230
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 231 GARD-------LISRLLKHNPSQRPMLREV 253
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 20 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 132 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 185
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 235
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 236 GARD-------LISRLLKHNPSQRPMLREV 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 42 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 154 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 207
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 257
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 258 GARD-------LISRLLKHNPSQRPMLREV 280
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 146/313 (46%), Gaps = 41/313 (13%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 2 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 56
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 57 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNI 115
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL + A
Sbjct: 116 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 170
Query: 555 IQNCTVVQG---TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERS 611
+ +G + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
Query: 612 LAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 231 SILEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS 275
Query: 672 GRLSLMSNGQYYL 684
+ + Q YL
Sbjct: 276 ---KMARDPQRYL 285
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 19 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 131 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 184
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 234
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 235 GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 33 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 144
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 145 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 198
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 248
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 249 GARD-------LISRLLKHNPSQRPMLREV 271
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 3 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 116
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 234 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 276
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 277 -KMARDPQRYL 286
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 5 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 59
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 60 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 118
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 119 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 235
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 236 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 278
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 279 -KMARDPQRYL 288
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 25/275 (9%)
Query: 407 DVIGCGGSGNVYKGF-LPDRTPVAVKKSKFVD-QAKIDEFINELVVVLQINRRNVVRLLG 464
+VIG G + V + P + VA+K+ Q +DE + E+ + Q + N+V
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 465 CCLETQVPLLVYEFVGNGTLFE---HI-----HKKGNLSWERRLRITAETAGVLSYLHSE 516
+ LV + + G++ + HI HK G L I E L YLH
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPI--DAIQNCT--VVQGTLGYLDPEY 572
IHRDVK+ NILL E+ + +++DFG S + D +N GT ++ PE
Sbjct: 141 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 197
Query: 573 LQTCKLTD-KSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDN 631
++ + D K+D++SFG+ +EL TG P M L QN +
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP-------MKVLMLTLQNDPPSLETG 250
Query: 632 RIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
+ K+ K K+ + C+ E+RPT E+
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
VIG G G V G L P + VAV K + ++ + D F+ E ++ Q + NVV
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD-FLCEASIMGQFDHPNVVH 108
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKK-GNLSWERRLRITAETAGVLSYLHSETNVP 520
L G + ++V EF+ NG L + K G + +++ G+ + + ++
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFT---VIQLVGMLRGIAAGMRYLADMG 165
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKLVPID--AIQNCTVVQGTLGYLDPEYLQTCKL 578
+HRD+ + NIL++ N KVSDFG S+++ D A+ T + + + PE +Q K
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 579 TDKSDVYSFGVVLVELLT 596
T SDV+S+G+V+ E+++
Sbjct: 226 TSASDVWSYGIVMWEVMS 243
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 32/292 (10%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQ 438
++ L G +++ +++ EE + D IG G G VYKG D V K +D
Sbjct: 2 MAHLRGFANQHSRVDPEELFTKL-----DRIGKGSFGEVYKGI--DNHTKEVVAIKIIDL 54
Query: 439 AKIDEFI----NELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNL 494
+ ++ I E+ V+ Q + + R G L++ ++ E++G G+ + + K G L
Sbjct: 55 EEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPL 113
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
I E L YLHSE IHRD+K+AN+LL E K++DFG + +
Sbjct: 114 EETYIATILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 170
Query: 555 IQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM 614
I+ V GT ++ PE ++ K+D++S G+ +EL G + P
Sbjct: 171 IKRNXFV-GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG------EPPN------- 216
Query: 615 NFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
S L R+L ++ Q K + C++ RPT KE+
Sbjct: 217 ---SDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 26 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 80
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 81 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 139
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 140 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 196
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 197 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 256
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 257 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 299
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 300 -KMARDPQRYL 309
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 27/276 (9%)
Query: 407 DVIGCGGSGNVYKGF-LPDRTPVAVKKSKFVD-QAKIDEFINELVVVLQINRRNVVRLLG 464
+VIG G + V + P + VA+K+ Q +DE + E+ + Q + N+V
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 465 CCLETQVPLLVYEFVGNGTLFE---HI-----HKKGNLSWERRLRITAETAGVLSYLHSE 516
+ LV + + G++ + HI HK G L I E L YLH
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPI--DAIQNCT--VVQGTLGYLDPEY 572
IHRDVK+ NILL E+ + +++DFG S + D +N GT ++ PE
Sbjct: 136 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 192
Query: 573 LQTCKLTD-KSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM-NFLSSLKQNRLLEILD 630
++ + D K+D++SFG+ +EL TG P + L + N SL+ + D
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG----VQD 248
Query: 631 NRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ K+ K K+ + C+ E+RPT E+
Sbjct: 249 KEML----KKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 16 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 128 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTELCGTLDYLPPEMIEGR 181
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 231
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 232 GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 21 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ G +++ + K +R E A LSY HS+
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 133 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 186
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 236
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 237 GARD-------LISRLLKHNPSQRPMLREV 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 16 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 128 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTXLCGTLDYLPPEMIEGR 181
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 231
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 232 GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 1 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNI 114
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 232 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 274
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 275 -KMARDPQRYL 284
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 1 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 114
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 232 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 274
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 275 -KMARDPQRYL 284
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 3 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 116
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 234 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 276
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 277 -KMARDPQRYL 286
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 391 KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFVDQAKID-EF 444
+I E E K + V+G G G VYKG ++P+ + PVA+K+ + K + E
Sbjct: 14 RILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 68
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRIT 503
++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+ + L
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWC 127
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A ++YL ++HRD+ + N+L+ K++DFG +KL + A + +G
Sbjct: 128 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEG 182
Query: 564 ---TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSL 620
+ ++ E + T +SDV+S+GV + EL+T P E S + L
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 242
Query: 621 KQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNG 680
Q + I +V + +C + + RP +E+ +E + +
Sbjct: 243 PQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS---KMARDP 284
Query: 681 QYYL 684
Q YL
Sbjct: 285 QRYL 288
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 2 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 56
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 57 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 115
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 116 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 232
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 233 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 275
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 276 -KMARDPQRYL 285
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 3 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 116
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 234 LEKGERLPQPPICTI---------------DVYMIMRKCWMIDADSRPKFRELIIEFS-- 276
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 277 -KMARDPQRYL 286
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 4 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 58
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 117
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 118 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 235 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 277
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 278 -KMARDPQRYL 287
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGF 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 3 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 116
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 234 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 276
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 277 -KMARDPQRYL 286
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 7 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 61
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 62 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 120
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 121 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 177
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 178 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 237
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 238 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 280
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 281 -KMARDPQRYL 290
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 21 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 133 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTDLCGTLDYLPPEMIEGR 186
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 236
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 237 GARD-------LISRLLKHNPSQRPMLREV 259
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 4 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 58
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 117
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 118 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 235 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 277
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 278 -KMARDPQRYL 287
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 1 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 114
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 171
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 232 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 274
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 275 -KMARDPQRYL 284
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 8 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 62
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 121
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 239 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 281
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 282 -KMARDPQRYL 291
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 15/209 (7%)
Query: 399 KTVTNNYADVIGCGGSGNVYKGFLPD----RTPVAVKK-SKFVDQAKIDEFINELVVVLQ 453
+ V + VIG G G VY G D R A+K S+ + +++ F+ E +++
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 454 INRRNVVRLLGCCLETQ-VPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLS 511
+N NV+ L+G L + +P ++ ++ +G L + I + N + + + + A +
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGME 138
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPID----AIQNCTVVQGTLGY 567
YL + +HRD+ + N +LDE+ T KV+DFG ++ + +D ++Q + + +
Sbjct: 139 YLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKW 194
Query: 568 LDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
E LQT + T KSDV+SFGV+L ELLT
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 17 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 129 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTDLCGTLDYLPPEMIEGR 182
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 232
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 233 GARD-------LISRLLKHNPSQRPMLREV 255
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 4 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 58
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 117
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 118 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 235 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 277
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 278 -KMARDPQRYL 287
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY ++SKF+ K+ + E+ + +
Sbjct: 20 LGKGKFGNVYLA--------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL N K++DFG S P T + GTL YL PE ++
Sbjct: 132 R---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 185
Query: 577 KLTDKSDVYSFGVVLVELLTG 597
+K D++S GV+ E L G
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 8 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 62
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 121
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 239 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 281
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 282 -KMARDPQRYL 291
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 21 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ G +++ + K +R E A LSY HS+
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 133 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRXXLXGTLDYLPPEMIEGR 186
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 236
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 237 GARD-------LISRLLKHNPSQRPMLREV 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 16 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 128 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTDLCGTLDYLPPEMIEGR 181
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 231
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 232 GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 1 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 114
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 232 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 274
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 275 -KMARDPQRYL 284
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 37/289 (12%)
Query: 382 LHGQSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI 441
L+ QS + ++FT+ E IG G G V+KG D V K +D +
Sbjct: 18 LYFQSMDPEELFTKLE----------KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEA 65
Query: 442 DEFI----NELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWE 497
++ I E+ V+ Q + V + G L+ ++ E++G G+ + + + G L
Sbjct: 66 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDET 124
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
+ I E L YLHSE IHRD+K+AN+LL E+ K++DFG + + I+
Sbjct: 125 QIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 181
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFL 617
T V GT ++ PE ++ K+D++S G+ +EL G +P M L
Sbjct: 182 NTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG-------EPPHSELHPMKVL 233
Query: 618 SSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
+ +N N +GN K + + C++ RPT KE+
Sbjct: 234 FLIPKN-------NPPTLEGNYS--KPLKEFVEACLNKEPSFRPTAKEL 273
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 3 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 116
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 234 LEKGERLPQPPICTI---------------DVYMIMRKCWMIDADSRPKFRELIIEFS-- 276
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 277 -KMARDPQRYL 286
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 140/302 (46%), Gaps = 35/302 (11%)
Query: 391 KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFVDQAKID-EF 444
+I E E K + V+G G G VYKG ++P+ + PVA+K+ + K + E
Sbjct: 4 RILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 58
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRIT 503
++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+ + L
Sbjct: 59 LDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWC 117
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQ-NCTVVQ 562
+ A ++YL ++HRD+ + N+L+ K++DFG +KL+ + + + +
Sbjct: 118 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ E + T +SDV+S+GV + EL+T P E S + L Q
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 234
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQY 682
+ I +V + +C + + RP +E+ +E + + Q
Sbjct: 235 PPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS---KMARDPQR 276
Query: 683 YL 684
YL
Sbjct: 277 YL 278
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 98
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 156
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 216
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 217 SASDVWSYGIVLWEVMS 233
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 16 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P T + GTL YL PE ++
Sbjct: 128 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTDLCGTLDYLPPEMIEGR 181
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 231
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 232 GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 108
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 166
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 226
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 227 SASDVWSYGIVLWEVMS 243
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 4 GEAPNQALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 58
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 117
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 118 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 235 LEKGERLPQPPICTI---------------DVYMIMRKCWMIDADSRPKFRELIIEFS-- 277
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 278 -KMARDPQRYL 287
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 19 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 131 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRAALCGTLDYLPPEMIEGR 184
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 234
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 235 GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 81
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 200 SASDVWSYGIVLWEVMS 216
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 19 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 131 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGR 184
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 234
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 235 GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 27/262 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF---VDQAKID-EFINELVVVLQINRRNVVRLLG 464
+G G GNVY + + K F +++A ++ + E+ + + N++RL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
++ L+ E+ GT++ + K +R E A LSY HS+ +IHR
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK---VIHR 132
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+K N+LL K++DFG S P + GTL YL PE ++ +K D+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSS---RRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 585 YSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKE 644
+S GV+ E L GK P E A + + K+ +E V +G +
Sbjct: 190 WSLGVLCYEFLVGK------PPFE----ANTYQDTYKRISRVEFTFPDFVTEGARD---- 235
Query: 645 VAKLAARCISVRGEERPTMKEV 666
L +R + +RP ++EV
Sbjct: 236 ---LISRLLKHNPSQRPMLREV 254
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 16 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 128 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRAALCGTLDYLPPEMIEGR 181
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 231
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 232 GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 18 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K+++FG S P T + GTL YL PE ++
Sbjct: 130 R---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 183
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 233
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 234 GARD-------LISRLLKHNPSQRPMLREV 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 42 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 154 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGR 207
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 257
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 258 GARD-------LISRLLKHNPSQRPMLREV 280
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 140/302 (46%), Gaps = 35/302 (11%)
Query: 391 KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFVDQAKID-EF 444
+I E E K + V+G G G VYKG ++P+ + PVA+K+ + K + E
Sbjct: 20 RILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 74
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRIT 503
++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+ + L
Sbjct: 75 LDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWC 133
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQ-NCTVVQ 562
+ A ++YL ++HRD+ + N+L+ K++DFG +KL+ + + + +
Sbjct: 134 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ E + T +SDV+S+GV + EL+T P E S + L Q
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 250
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQY 682
+ I +V + +C + + RP +E+ +E + + Q
Sbjct: 251 PPICTI---------------DVYMIMRKCWMIDADSRPKFRELIIEFS---KMARDPQR 292
Query: 683 YL 684
YL
Sbjct: 293 YL 294
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 140/302 (46%), Gaps = 35/302 (11%)
Query: 391 KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFVDQAKID-EF 444
+I E E K + V+G G G VYKG ++P+ + PVA+K+ + K + E
Sbjct: 7 RILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRIT 503
++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+ + L
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWC 120
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQ-NCTVVQ 562
+ A ++YL ++HRD+ + N+L+ K++DFG +KL+ + + + +
Sbjct: 121 VQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ E + T +SDV+S+GV + EL+T P E S + L Q
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 237
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQY 682
+ I +V + +C + + RP +E+ +E + + Q
Sbjct: 238 PPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS---KMARDPQR 279
Query: 683 YL 684
YL
Sbjct: 280 YL 281
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKKSKFVDQAKID-EFINELVVVLQINRRNVVRLLGCC 466
IG G G V+ G L D T VAVK + + +F+ E ++ Q + N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 467 LETQVPLLVYEFVGNGTLFEHIHKKG-NLSWERRLRITAETAGVLSYLHSETNVPIIHRD 525
+ Q +V E V G + +G L + L++ + A + YL S+ IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 526 VKSANILLDENCTPKVSDFGASKLVPIDAIQNCT--VVQGTLGYLDPEYLQTCKLTDKSD 583
+ + N L+ E K+SDFG S+ D + + + Q + + PE L + + +SD
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 584 VYSFGVVLVE 593
V+SFG++L E
Sbjct: 298 VWSFGILLWE 307
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+K+ +
Sbjct: 1 GEAPNQALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 114
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 232 LEKGERLPQPPICTI---------------DVYMIMRKCWMIDADSRPKFRELIIEFS-- 274
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 275 -KMARDPQRYL 284
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 19 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K+++FG S P T + GTL YL PE ++
Sbjct: 131 R---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGR 184
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 234
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 235 GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 17 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 129 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRDTLCGTLDYLPPEMIEGR 182
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 232
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 233 GARD-------LISRLLKHNPSQRPMLREV 255
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 429 AVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHI 488
+KK V +++ +E +++ + ++R+ G + Q ++ +++ G LF +
Sbjct: 38 VLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL 97
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
K AE L YLHS+ II+RD+K NILLD+N K++DFG +K
Sbjct: 98 RKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAK 154
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
VP C GT Y+ PE + T D +SFG+++ E+L G
Sbjct: 155 YVPDVTYXLC----GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 18 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 130 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRXXLCGTLDYLPPEMIEGR 183
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 233
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 234 GARD-------LISRLLKHNPSQRPMLREV 256
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG ++++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 116/217 (53%), Gaps = 21/217 (9%)
Query: 390 AKIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFVDQAKIDEF 444
A+IF E E++ + V+G G G V+KG ++P+ + PV +K + D++ F
Sbjct: 7 ARIFKETELRKLK-----VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKSGRQSF 59
Query: 445 ---INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRL 500
+ ++ + ++ ++VRLLG C + + L V +++ G+L +H+ + +G L + L
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLL 118
Query: 501 RITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNC-T 559
+ A + YL ++HR++ + N+LL +V+DFG + L+P D Q +
Sbjct: 119 NWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175
Query: 560 VVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ + ++ E + K T +SDV+S+GV + EL+T
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKKSKFVDQAKID-EFINELVVVLQINRRNVVRLLGCC 466
IG G G V+ G L D T VAVK + + +F+ E ++ Q + N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 467 LETQVPLLVYEFVGNGTLFEHIHKKG-NLSWERRLRITAETAGVLSYLHSETNVPIIHRD 525
+ Q +V E V G + +G L + L++ + A + YL S+ IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 526 VKSANILLDENCTPKVSDFGASKLVPIDAIQNCT--VVQGTLGYLDPEYLQTCKLTDKSD 583
+ + N L+ E K+SDFG S+ D + + + Q + + PE L + + +SD
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 584 VYSFGVVLVE 593
V+SFG++L E
Sbjct: 298 VWSFGILLWE 307
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 116/217 (53%), Gaps = 21/217 (9%)
Query: 390 AKIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFVDQAKIDEF 444
A+IF E E++ + V+G G G V+KG ++P+ + PV +K + D++ F
Sbjct: 25 ARIFKETELRKLK-----VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKSGRQSF 77
Query: 445 ---INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRL 500
+ ++ + ++ ++VRLLG C + + L V +++ G+L +H+ + +G L + L
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLL 136
Query: 501 RITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNC-T 559
+ A + YL ++HR++ + N+LL +V+DFG + L+P D Q +
Sbjct: 137 NWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 193
Query: 560 VVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ + ++ E + K T +SDV+S+GV + EL+T
Sbjct: 194 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 16 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 128 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRXXLCGTLDYLPPEMIEGR 181
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 231
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 232 GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY K+SKF+ K+ + E+ + +
Sbjct: 19 LGKGKFGNVYLA--------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P + GTL YL PE ++
Sbjct: 131 R---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRXXLCGTLDYLPPEMIEGR 184
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVND 636
+K D++S GV+ E L GK P E A + + K+ +E V +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK------PPFE----ANTYQETYKRISRVEFTFPDFVTE 234
Query: 637 GNKQQLKEVAKLAARCISVRGEERPTMKEV 666
G + L +R + +RP ++EV
Sbjct: 235 GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V G + VAVK K ++ DEF E +++++ +V+ G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN-LSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
+V E++ NG L ++ G L + L + + +++L S IHRD+
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLA 131
Query: 528 SANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+ N L+D + KVSDFG ++ V D + + + + PE K + KSDV++F
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191
Query: 588 GVVLVELLT-GKM 599
G+++ E+ + GKM
Sbjct: 192 GILMWEVFSLGKM 204
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 119/262 (45%), Gaps = 27/262 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFI----NELVVVLQINRRNVVRLLG 464
IG G G V+KG D V K +D + ++ I E+ V+ Q + V + G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
L+ ++ E++G G+ + + + G L + I E L YLHSE IHR
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKK---IHR 128
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+K+AN+LL E+ K++DFG + + I+ T V GT ++ PE ++ K+D+
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADI 187
Query: 585 YSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKE 644
+S G+ +EL G +P M L + +N N +GN K
Sbjct: 188 WSLGITAIELARG-------EPPHSELHPMKVLFLIPKN-------NPPTLEGNYS--KP 231
Query: 645 VAKLAARCISVRGEERPTMKEV 666
+ + C++ RPT KE+
Sbjct: 232 LKEFVEACLNKEPSFRPTAKEL 253
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+ G G VYKG ++P+ + PVA+K+ +
Sbjct: 8 GEAPNQALLRILKETEFKKIK-----VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 62
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L++ + + G L +++ + K N+
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 121
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 239 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 281
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 282 -KMARDPQRYL 291
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E++ NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG +++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 409 IGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCL 467
IG G SG VY + VA+++ Q K + INE++V+ + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 468 ETQVPLLVYEFVGNGTLFEHIHK----KGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+V E++ G+L + + + +G ++ + E L +LHS +IH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSNQ---VIH 139
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSD 583
RD+KS NILL + + K++DFG + + + T+V GT ++ PE + K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 584 VYSFGVVLVELLTGKMALLSDKP 606
++S G++ +E++ G+ L++ P
Sbjct: 199 IWSLGIMAIEMIEGEPPYLNENP 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E + NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGA 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 110
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E + NG+L + K + +++ G+ S + +++
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 408 VIGCGGSGNVYKGFL--PDRTPVAVK----KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
V+G G G V G L P + ++V K + ++ + D F+ E ++ Q + N++R
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIR 81
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L G +++ ++V E + NG+L + K + +++ G+ S + +++
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKLT 579
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K T
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+S+G+VL E+++
Sbjct: 200 SASDVWSYGIVLWEVMS 216
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 450 VVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
+++++N +V+L +T+ L L+ +F+ G LF + K+ + E AE A
Sbjct: 79 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
L +LHS + II+RD+K NILLDE K++DFG SK ID + GT+ Y+
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 193
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM-------NFLSSLK 621
PE + T +D +SFGV++ E+LTG + +E ++ + FLS
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA 253
Query: 622 QNRLLEILDNRIVNDGNK 639
Q+ LL +L R N N+
Sbjct: 254 QS-LLRMLFKR--NPANR 268
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 408 VIGCGGSGNVYKGFLPDRTP------VAVK--KSKFVDQAKIDEFINELVVVLQINRRNV 459
VIG G G V G L + P VA+K K+ + D+ + D F++E ++ Q + N+
Sbjct: 36 VIGVGEFGEVCSGRL--KVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 92
Query: 460 VRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK-GNLSWERRLRITAETAGVLSYLHSETN 518
+ L G + + +++ E++ NG+L + K G + +++ G+ S + ++
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT---VIQLVGMLRGIGSGMKYLSD 149
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTC 576
+ +HRD+ + NIL++ N KVSDFG S+++ D T G + + PE +
Sbjct: 150 MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 577 KLTDKSDVYSFGVVLVELLT 596
K T SDV+S+G+V+ E+++
Sbjct: 210 KFTSASDVWSYGIVMWEVMS 229
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY ++SKF+ K+ + E+ + +
Sbjct: 20 LGKGKFGNVYLA--------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL G + L+ E+ GT++ + K +R E A LSY HS+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL N K++DFG S P GTL YL PE ++
Sbjct: 132 R---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC---GTLDYLPPEMIEGR 185
Query: 577 KLTDKSDVYSFGVVLVELLTG 597
+K D++S GV+ E L G
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 14 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 66
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 67 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 126
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+DE +V+DFG +K V
Sbjct: 127 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW 183
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 184 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 144/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+ G G VYKG ++P+ + PVA+K+ +
Sbjct: 1 GEAPNQALLRILKETEFKKIK-----VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 114
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 232 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 274
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 275 -KMARDPQRYL 284
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 144/311 (46%), Gaps = 37/311 (11%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+ G G VYKG ++P+ + PVA+K+ +
Sbjct: 8 GEAPNQALLRILKETEFKKIK-----VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 62
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 121
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL+ +
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 555 IQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
+ + + + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 614 MNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGR 673
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 239 LEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS-- 281
Query: 674 LSLMSNGQYYL 684
+ + Q YL
Sbjct: 282 -KMARDPQRYL 291
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 408 VIGCGGSGNVYKGFLPDRTP------VAVK--KSKFVDQAKIDEFINELVVVLQINRRNV 459
VIG G G V G L + P VA+K K+ + D+ + D F++E ++ Q + N+
Sbjct: 21 VIGVGEFGEVCSGRL--KVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 77
Query: 460 VRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK-GNLSWERRLRITAETAGVLSYLHSETN 518
+ L G + + +++ E++ NG+L + K G + +++ G+ S + ++
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT---VIQLVGMLRGIGSGMKYLSD 134
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTC 576
+ +HRD+ + NIL++ N KVSDFG S+++ D T G + + PE +
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 577 KLTDKSDVYSFGVVLVELLT 596
K T SDV+S+G+V+ E+++
Sbjct: 195 KFTSASDVWSYGIVMWEVMS 214
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Query: 408 VIGCGGSGNVYKGFL--PDRT--PVAVK--KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
VIG G G V G L P + PVA+K K + ++ + D F+ E ++ Q + N++
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIH 87
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKK-GNLSWERRLRITAETAGVLSYLHSETNVP 520
L G +++ ++V E++ NG+L + K G + +++ G+ + + +++
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT---VIQLVGMLRGISAGMKYLSDMG 144
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTCKL 578
+HRD+ + NIL++ N KVSDFG S+++ D T G + + PE + K
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 579 TDKSDVYSFGVVLVELLT 596
T SDV+S+G+V+ E+++
Sbjct: 205 TSASDVWSYGIVMWEVVS 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 408 VIGCGGSGNVYKGFLPDRTP------VAVK--KSKFVDQAKIDEFINELVVVLQINRRNV 459
VIG G G V G L + P VA+K K+ + D+ + D F++E ++ Q + N+
Sbjct: 15 VIGVGEFGEVCSGRL--KVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 71
Query: 460 VRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK-GNLSWERRLRITAETAGVLSYLHSETN 518
+ L G + + +++ E++ NG+L + K G + +++ G+ S + ++
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT---VIQLVGMLRGIGSGMKYLSD 128
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG--YLDPEYLQTC 576
+ +HRD+ + NIL++ N KVSDFG S+++ D T G + + PE +
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 577 KLTDKSDVYSFGVVLVELLT 596
K T SDV+S+G+V+ E+++
Sbjct: 189 KFTSASDVWSYGIVMWEVMS 208
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ EF+ G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
E++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 105 EYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 161
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 222 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 278
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 279 RPSFRDLALRV 289
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 450 VVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
+++++N +V+L +T+ L L+ +F+ G LF + K+ + E AE A
Sbjct: 80 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 138
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
L +LHS + II+RD+K NILLDE K++DFG SK ID + GT+ Y+
Sbjct: 139 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 194
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM-------NFLSSLK 621
PE + T +D +SFGV++ E+LTG + +E ++ + FLS
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA 254
Query: 622 QNRLLEILDNRIVNDGNK 639
Q+ LL +L R N N+
Sbjct: 255 QS-LLRMLFKR--NPANR 269
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 450 VVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
+++++N +V+L +T+ L L+ +F+ G LF + K+ + E AE A
Sbjct: 79 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
L +LHS + II+RD+K NILLDE K++DFG SK ID + GT+ Y+
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 193
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM-------NFLSSLK 621
PE + T +D +SFGV++ E+LTG + +E ++ + FLS
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA 253
Query: 622 QNRLLEILDNRIVNDGNK 639
Q+ LL +L R N N+
Sbjct: 254 QS-LLRMLFKR--NPANR 268
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 397 EIKTVTNNYADV---------IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFI-- 445
++ + NN AD IG G G V+KG D V K +D + ++ I
Sbjct: 10 QVPGMQNNIADPEELFTKLERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIED 67
Query: 446 --NELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT 503
E+ V+ Q + V + G L+ ++ E++G G+ + + + G + +
Sbjct: 68 IQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATML 126
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
E L YLHSE IHRD+K+AN+LL E K++DFG + + I+ T V G
Sbjct: 127 KEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-G 182
Query: 564 TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
T ++ PE +Q K+D++S G+ +EL G+
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 409 IGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCL 467
IG G SG VY + VA+++ Q K + INE++V+ + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 468 ETQVPLLVYEFVGNGTLFEHIHK----KGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+V E++ G+L + + + +G ++ + E L +LHS +IH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSNQ---VIH 139
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+KS NILL + + K++DFG +++ P + ++ V GT ++ PE + K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV--GTPYWMAPEVVTRKAYGPKV 197
Query: 583 DVYSFGVVLVELLTGKMALLSDKP 606
D++S G++ +E++ G+ L++ P
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 35/218 (16%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
V+G G G V K D A+KK + ++ K+ ++E++++ +N + VVR
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 467 LETQ-------------VPLLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLS 511
LE + + E+ NGTL++ IH + NL+ +R R+ + LS
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALS 130
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV--PIDAIQ-----------NC 558
Y+HS+ IIHRD+K NI +DE+ K+ DFG +K V +D ++ N
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 559 TVVQGTLGYLDPEYLQ-TCKLTDKSDVYSFGVVLVELL 595
T GT Y+ E L T +K D+YS G++ E++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 27/262 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVD----QAKIDEFINELVVVLQINRRNVVRLLG 464
IG G G V+KG D V K +D + +I++ E+ V+ Q + V + G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
L+ ++ E++G G+ + + + G L + I E L YLHSE IHR
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKK---IHR 143
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+K+AN+LL E+ K++DFG + + I+ V GT ++ PE ++ K+D+
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADI 202
Query: 585 YSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKE 644
+S G+ +EL G +P M L + +N N +GN K
Sbjct: 203 WSLGITAIELARG-------EPPHSELHPMKVLFLIPKN-------NPPTLEGNYS--KP 246
Query: 645 VAKLAARCISVRGEERPTMKEV 666
+ + C++ RPT KE+
Sbjct: 247 LKEFVEACLNKEPSFRPTAKEL 268
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 409 IGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCL 467
IG G SG VY + VA+++ Q K + INE++V+ + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 468 ETQVPLLVYEFVGNGTLFEHIHK----KGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+V E++ G+L + + + +G ++ + E L +LHS +IH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSNQ---VIH 140
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+KS NILL + + K++DFG +++ P + ++ V GT ++ PE + K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV--GTPYWMAPEVVTRKAYGPKV 198
Query: 583 DVYSFGVVLVELLTGKMALLSDKP 606
D++S G++ +E++ G+ L++ P
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 41/313 (13%)
Query: 384 GQSSEKA--KIFTEEEIKTVTNNYADVIGCGGSGNVYKG-FLPD----RTPVAVKKSKFV 436
G++ +A +I E E K + V+G G G VYKG ++P+ + PVA+ + +
Sbjct: 35 GEAPNQALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREA 89
Query: 437 DQAKID-EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNL 494
K + E ++E V+ ++ +V RLLG CL + V L+ + + G L +++ + K N+
Sbjct: 90 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 148
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ L + A ++YL ++HRD+ + N+L+ K++DFG +KL + A
Sbjct: 149 GSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 203
Query: 555 IQNCTVVQG---TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERS 611
+ +G + ++ E + T +SDV+S+GV + EL+T P E S
Sbjct: 204 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
Query: 612 LAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
+ L Q + I +V + +C + + RP +E+ +E
Sbjct: 264 SILEKGERLPQPPICTI---------------DVYMIMVKCWMIDADSRPKFRELIIEFS 308
Query: 672 GRLSLMSNGQYYL 684
+ + Q YL
Sbjct: 309 ---KMARDPQRYL 318
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 408 VIGCGGSGNVYKGFL--PDRTP--VAVK--KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
VIG G G V G L P + VA+K KS + ++ + D F++E ++ Q + NV+
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNVIH 98
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKK-GNLSWERRLRITAETAGVLSYLHSETNVP 520
L G ++ +++ EF+ NG+L + + G + + + + A + YL ++
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 155
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG-----YLDPEYLQT 575
+HRD+ + NIL++ N KVSDFG S+ + D + T G + PE +Q
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 576 CKLTDKSDVYSFGVVLVELLT 596
K T SDV+S+G+V+ E+++
Sbjct: 215 RKFTSASDVWSYGIVMWEVMS 235
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 27 LKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ KV+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 32/244 (13%)
Query: 380 SKLHGQSSEKAKIFTEEEIKTVTNNYADVI-----GCGGSGNVY----KGFLP--DRTPV 428
S L G E + F++ + + D++ G G G V+ LP D+ V
Sbjct: 17 SGLQGHIIENPQYFSDACVHHIKRR--DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLV 74
Query: 429 AVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL--FE 486
AVK K ++ +F E ++ + +++VR G C E + L+V+E++ +G L F
Sbjct: 75 AVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
Query: 487 HIH-------------KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILL 533
H G L + L + ++ A + YL + +HRD+ + N L+
Sbjct: 135 RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLV 191
Query: 534 DENCTPKVSDFGASK-LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLV 592
+ K+ DFG S+ + D + + ++ PE + K T +SDV+SFGVVL
Sbjct: 192 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 251
Query: 593 ELLT 596
E+ T
Sbjct: 252 EIFT 255
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + + F+ E V+ ++ +V+L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 252 EPI-YIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG +L+ + + + + PE + T KSDV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 366 WSFGILLTELTT 377
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ +I +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 85 EPI-YIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 27/262 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFI----NELVVVLQINRRNVVRLLG 464
IG G G V+KG D V K +D + ++ I E+ V+ Q + V + G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
L+ ++ E++G G+ + + + G L + I E L YLHSE IHR
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKK---IHR 128
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+K+AN+LL E+ K++DFG + + I+ V GT ++ PE ++ K+D+
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADI 187
Query: 585 YSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKE 644
+S G+ +EL G +P M L + +N N +GN K
Sbjct: 188 WSLGITAIELARG-------EPPHSELHPMKVLFLIPKN-------NPPTLEGNYS--KP 231
Query: 645 VAKLAARCISVRGEERPTMKEV 666
+ + C++ RPT KE+
Sbjct: 232 LKEFVEACLNKEPSFRPTAKEL 253
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 28 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 80
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 140
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 141 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 198 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 409 IGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCL 467
IG G SG VY + VA+++ Q K + INE++V+ + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 468 ETQVPLLVYEFVGNGTLFEHIHK----KGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+V E++ G+L + + + +G ++ + E L +LHS +IH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSNQ---VIH 139
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+KS NILL + + K++DFG +++ P + ++ V GT ++ PE + K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV--GTPYWMAPEVVTRKAYGPKV 197
Query: 583 DVYSFGVVLVELLTGKMALLSDKP 606
D++S G++ +E++ G+ L++ P
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 409 IGCGGSGNV----YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLG 464
IG G G+V Y+G VAVK K + A F+ E V+ Q+ N+V+LLG
Sbjct: 201 IGKGEFGDVMLGDYRG-----NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 465 CCLETQVPL-LVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPI 521
+E + L +V E++ G+L +++ +G L + L+ + + + YL
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 310
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
+HRD+ + N+L+ E+ KVSDFG +K +A + + + PE L+ K + K
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFG++L E+ +
Sbjct: 367 SDVWSFGILLWEIYS 381
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 409 IGCGGSGNV----YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLG 464
IG G G+V Y+G VAVK K + A F+ E V+ Q+ N+V+LLG
Sbjct: 29 IGKGEFGDVMLGDYRG-----NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 465 CCLETQVPL-LVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPI 521
+E + L +V E++ G+L +++ +G L + L+ + + + YL
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 138
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
+HRD+ + N+L+ E+ KVSDFG +K +A + + + PE L+ K + K
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFG++L E+ +
Sbjct: 195 SDVWSFGILLWEIYS 209
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 48 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 100
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 160
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 161 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW 217
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 218 TLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---- 192
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
+ GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 409 IGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCL 467
IG G SG VY + VA+++ Q K + INE++V+ + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 468 ETQVPLLVYEFVGNGTLFEHIHK----KGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+V E++ G+L + + + +G ++ + E L +LHS +IH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSNQ---VIH 140
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSD 583
R++KS NILL + + K++DFG + + + T+V GT ++ PE + K D
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 199
Query: 584 VYSFGVVLVELLTGKMALLSDKP 606
++S G++ +E++ G+ L++ P
Sbjct: 200 IWSLGIMAIEMIEGEPPYLNENP 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---- 192
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
+ GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 406 ADV-IGCGGSGNVYKGFLPDRTP---VAVKKSKF-VDQAKIDEFINELVVVLQINRRNVV 460
AD+ +GCG G+V +G R VA+K K ++A +E + E ++ Q++ +V
Sbjct: 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEH-IHKKGNLSWERRLRITAETAGVLSYLHSETNV 519
RL+G C + + +LV E G G L + + K+ + + + + + YL +
Sbjct: 74 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN-- 130
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCK 577
+HRD+ + N+LL K+SDFG SK + D G L + PE + K
Sbjct: 131 -FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 578 LTDKSDVYSFGVVLVELLT 596
+ +SDV+S+GV + E L+
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 21/193 (10%)
Query: 409 IGCGGSGNV----YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLG 464
IG G G+V Y+G VAVK K + A F+ E V+ Q+ N+V+LLG
Sbjct: 14 IGKGEFGDVMLGDYRG-----NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 465 CCLETQVPL-LVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPI 521
+E + L +V E++ G+L +++ +G L + L+ + + + YL
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 123
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
+HRD+ + N+L+ E+ KVSDFG +K +A + + + PE L+ K + K
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 582 SDVYSFGVVLVEL 594
SDV+SFG++L E+
Sbjct: 180 SDVWSFGILLWEI 192
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 85 EPI-YIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 85 EPI-YIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G +
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFA 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 85 EPI-YIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + F+ E V+ ++ +V+L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 76 EPI-YIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 190 WSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + F+ E V+ ++ +V+L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 74 EPI-YIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 188 WSFGILLTELTT 199
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ ++ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 409 IGCGGSGNVY----KGFLP--DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+ LP D+ VAVK K ++ +F E ++ + +++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 463 LGCCLETQVPLLVYEFVGNGTL--FEHIH-------------KKGNLSWERRLRITAETA 507
G C E + L+V+E++ +G L F H G L + L + ++ A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 508 GVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK-LVPIDAIQNCTVVQGTLG 566
+ YL + +HRD+ + N L+ + K+ DFG S+ + D + +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
++ PE + K T +SDV+SFGVVL E+ T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + F+ E V+ ++ +V+L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ +V E++ G+L + + + L + + + A+ A ++Y+ + +HRD+
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 389
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV+S
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 587 FGVVLVELLT 596
FG++L EL T
Sbjct: 450 FGILLTELTT 459
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 27 LKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E++ G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ KV+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 21/193 (10%)
Query: 409 IGCGGSGNV----YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLG 464
IG G G+V Y+G VAVK K + A F+ E V+ Q+ N+V+LLG
Sbjct: 20 IGKGEFGDVMLGDYRG-----NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 465 CCLETQVPL-LVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPI 521
+E + L +V E++ G+L +++ +G L + L+ + + + YL
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 129
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
+HRD+ + N+L+ E+ KVSDFG +K +A + + + PE L+ + K
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 582 SDVYSFGVVLVEL 594
SDV+SFG++L E+
Sbjct: 186 SDVWSFGILLWEI 198
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+++D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 27 LKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E++ G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ KV+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 109 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 165
Query: 545 GASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 166 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 225
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 226 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 282
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 283 RPSFRDLALRV 293
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+V G +F H+ +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + F+ E V+ ++ +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ +V E++ G+L + + + L + + + A+ A ++Y+ + +HRD+
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 587 FGVVLVELLT 596
FG++L EL T
Sbjct: 367 FGILLTELTT 376
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 409 IGCGGSGNVY----KGFLP--DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+ LP D+ VAVK K ++ +F E ++ + +++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 463 LGCCLETQVPLLVYEFVGNGTL--FEHIH-------------KKGNLSWERRLRITAETA 507
G C E + L+V+E++ +G L F H G L + L + ++ A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 508 GVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK-LVPIDAIQNCTVVQGTLG 566
+ YL + +HRD+ + N L+ + K+ DFG S+ + D + +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
++ PE + K T +SDV+SFGVVL E+ T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 189
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 190 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 250 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 306
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 307 RPSFRDLALRV 317
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 158
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 219 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 275
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 276 RPSFRDLALRV 286
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + F+ E V+ ++ +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ +V E++ G+L + + + L + + + A+ A ++Y+ + +HRD+
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 587 FGVVLVELLT 596
FG++L EL T
Sbjct: 367 FGILLTELTT 376
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 405 YADVIGCGGSGNVYKGFLPD---RTPVAVKKSK-FVDQAKIDEFINELVVVLQINRR-NV 459
+ DVIG G G V K + R A+K+ K + + +F EL V+ ++ N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 460 VRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS---YLHSE 516
+ LLG C L E+ +G L + + K L + I TA LS LH
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 517 TNVP----------IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+V IHRD+ + NIL+ EN K++DFG S+ + V+ T+G
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-------YVKKTMG 201
Query: 567 YLDPEYLQTCKL-----TDKSDVYSFGVVLVELLT 596
L ++ L T SDV+S+GV+L E+++
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 405 YADVIGCGGSGNVYKGFLPD---RTPVAVKKSK-FVDQAKIDEFINELVVVLQINRR-NV 459
+ DVIG G G V K + R A+K+ K + + +F EL V+ ++ N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 460 VRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS---YLHSE 516
+ LLG C L E+ +G L + + K L + I TA LS LH
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 517 TNVP----------IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+V IHRD+ + NIL+ EN K++DFG S+ + V+ T+G
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-------YVKKTMG 191
Query: 567 YLDPEYLQTCKL-----TDKSDVYSFGVVLVELLT 596
L ++ L T SDV+S+GV+L E+++
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 107 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 163
Query: 545 GASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 164 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 223
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 224 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 280
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 281 RPSFRDLALRV 291
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ +R + L +T L V E+ G LF H+ ++ S +R AE
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 122
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHSE NV ++RD+K N++LD++ K++DFG K + I++ ++ GT
Sbjct: 123 LDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTPE 176
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
YL PE L+ D + GVV+ E++ G++ + E+
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 105 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 161
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 222 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 278
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 279 RPSFRDLALRV 289
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V + +GN Y + D K K
Sbjct: 20 LKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD-------KQKV 72
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 73 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 132
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 133 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 189
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 190 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V + +GN Y + D K K
Sbjct: 28 LKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD-------KQKV 80
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 140
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 141 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 198 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V + +GN Y + D K K
Sbjct: 28 LKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD-------KQKV 80
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 140
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 141 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 198 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V + +GN Y + D K K
Sbjct: 28 LKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD-------KQKV 80
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 140
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 141 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 198 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 108 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 164
Query: 545 GASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 165 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 224
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 225 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 281
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 282 RPSFRDLALRV 292
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 134
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D G + + PE + K + K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 195 SDVWSFGVLMWEAFS 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ +R + L +T L V E+ G LF H+ ++ S +R AE
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 121
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHSE NV ++RD+K N++LD++ K++DFG K + I++ ++ GT
Sbjct: 122 LDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTPE 175
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
YL PE L+ D + GVV+ E++ G++ + E+
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 100 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 156
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 157 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 216
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 217 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 273
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 274 RPSFRDLALRV 284
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V + +GN Y + D K K
Sbjct: 48 LKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD-------KQKV 100
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 160
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 161 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 217
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 218 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 176
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 236
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 237 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 293
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 294 RPSFRDLALRV 304
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ +R + L +T L V E+ G LF H+ ++ S +R AE
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 120
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHSE NV ++RD+K N++LD++ K++DFG K + I++ ++ GT
Sbjct: 121 LDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTPE 174
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
YL PE L+ D + GVV+ E++ G++ + E+
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 216
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 147 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 199
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 234
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 85 EPI-YIVCEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 7/190 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ +V E++ G+L + + + L + + ++A+ A ++Y+ + +HRD+
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV+S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 587 FGVVLVELLT 596
FG++L EL T
Sbjct: 198 FGILLTELTT 207
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 158
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 219 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 275
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 276 RPSFRDLALRV 286
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 150
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D G + + PE + K + K
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 211 SDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 150
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D G + + PE + K + K
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 211 SDVWSFGVLMWEAFS 225
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 22 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 74
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 75 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 134
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 135 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 191
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 192 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 128
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D G + + PE + K + K
Sbjct: 129 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 188
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 189 SDVWSFGVLMWEAFS 203
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 158
Query: 545 GASKLVPIDA--IQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D + + + + PE L K + SDV+SFGVVL EL T
Sbjct: 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 219 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 275
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 276 RPSFRDLALRV 286
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 7/190 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ +V E++ G+L + + + L + + ++A+ A ++Y+ + +HRD+
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV+S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 587 FGVVLVELLT 596
FG++L EL T
Sbjct: 198 FGILLTELTT 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 148
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D G + + PE + K + K
Sbjct: 149 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 208
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 209 SDVWSFGVLMWEAFS 223
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 176
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 236
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 237 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 293
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 294 RPSFRDLALRV 304
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + F+ E V+ ++ +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ +V E++ G+L + + + L + + + A+ A ++Y+ + +HRD+
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 587 FGVVLVELLT 596
FG++L EL T
Sbjct: 367 FGILLTELTT 376
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 48 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 100
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 160
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 161 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 217
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 218 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 134
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D G + + PE + K + K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 195 SDVWSFGVLMWEAFS 209
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 101 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 157
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 158 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 217
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 218 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 274
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 275 RPSFRDLALRV 285
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 85 EPI-YIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ +V E++ G+L + + + L + + + A+ A ++Y+ + +HRD+
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 130
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV+S
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 587 FGVVLVELLT 596
FG++L EL T
Sbjct: 191 FGILLTELTT 200
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 106 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 162
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 163 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 222
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 223 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 279
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 280 RPSFRDLALRV 290
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 27 LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+V G +F H+ +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 27 LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+V G +F H+ +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + F+ E V+ ++ +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G+L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 85 EPI-YIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+ +ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ +R + L +T L V E+ G LF H+ ++ S +R AE
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 260
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHSE NV ++RD+K N++LD++ K++DFG K + I++ ++ GT
Sbjct: 261 LDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKTFCGTPE 314
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
YL PE L+ D + GVV+ E++ G++ + E+
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 356
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+V G +F H+ +
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 136
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 194 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 27 LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 492
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDA--IQNCTVVQGTLGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D + T + + + PE + K + K
Sbjct: 493 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 552
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 553 SDVWSFGVLMWEAFS 567
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 140
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D G + + PE + K + K
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 201 SDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 130
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D G + + PE + K + K
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 190
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 191 SDVWSFGVLMWEAFS 205
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 409 IGCGGSGNVYKGFLP-----DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+G G G V KG+ V + K++ D A DE + E V+ Q++ +VR++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G C E + +LV E G L +++ + ++ + + + + + + YL E+N +H
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--FVH 493
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDA--IQNCTVVQGTLGYLDPEYLQTCKLTDK 581
RD+ + N+LL K+SDFG SK + D + T + + + PE + K + K
Sbjct: 494 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 553
Query: 582 SDVYSFGVVLVELLT 596
SDV+SFGV++ E +
Sbjct: 554 SDVWSFGVLMWEAFS 568
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ +R + L +T L V E+ G LF H+ ++ S +R AE
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 263
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHSE NV ++RD+K N++LD++ K++DFG K + I++ ++ GT
Sbjct: 264 LDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKTFCGTPE 317
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
YL PE L+ D + GVV+ E++ G++ + E+
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 359
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 138 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 225
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+V G +F H+ +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 13 LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 65
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 66 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS 125
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 126 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 182
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 183 TLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL P + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 147 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 199
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+V G +F H+ +
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 136
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 194 GRTWTLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR----ITAETAGVLSYLHSETNVPIIHR 524
+ +V E++ G L + + KG + RL + A+ A ++Y+ + +HR
Sbjct: 85 EPI-YIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDV 584
D+++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 585 YSFGVVLVELLT 596
+SFG++L EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E V+ ++ +V+L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN--LSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
+ +V E++ G+L + + + L + + + A+ A ++Y+ + +HRD+
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 133
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
++ANIL+ EN KV+DFG ++L+ + + + + PE + T KSDV+S
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 587 FGVVLVELLT 596
FG++L EL T
Sbjct: 194 FGILLTELTT 203
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V + +GN Y + D K K
Sbjct: 28 LKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD-------KQKV 80
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+ G +F H+ + G S
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS 140
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+++D+ KV+DFG +K V
Sbjct: 141 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 198 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 144 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 196
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 231
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 146 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 198
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 233
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 140 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 192
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 227
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 153 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 205
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 240
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 143 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 195
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 230
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 146 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 198
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 175 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 227
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 262
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N ++ E+ T K+ DFG ++ D + +G G
Sbjct: 153 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 205
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 240
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 35/218 (16%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
V+G G G V K D A+KK + ++ K+ ++E++++ +N + VVR
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 467 LETQ-------------VPLLVYEFVGNGTLFEHIHKKGNLSWER--RLRITAETAGVLS 511
LE + + E+ N TL++ IH + NL+ +R R+ + LS
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQRDEYWRLFRQILEALS 130
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV--PIDAIQ-----------NC 558
Y+HS+ IIHRD+K NI +DE+ K+ DFG +K V +D ++ N
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 559 TVVQGTLGYLDPEYLQ-TCKLTDKSDVYSFGVVLVELL 595
T GT Y+ E L T +K D+YS G++ E++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 406 ADV-IGCGGSGNVYKGFLPDRTP---VAVKKSKF-VDQAKIDEFINELVVVLQINRRNVV 460
AD+ +GCG G+V +G R VA+K K ++A +E + E ++ Q++ +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEH-IHKKGNLSWERRLRITAETAGVLSYLHSETNV 519
RL+G C + + +LV E G G L + + K+ + + + + + YL +
Sbjct: 400 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN-- 456
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCK 577
+HR++ + N+LL K+SDFG SK + D G L + PE + K
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 578 LTDKSDVYSFGVVLVELLT 596
+ +SDV+S+GV + E L+
Sbjct: 516 FSSRSDVWSYGVTMWEALS 534
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+ G +F H+ +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+++D+ KV+DFG +K V
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 408 VIGCGGSGNVYKGFL--PDRTP--VAVK--KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
VIG G G V G L P + VA+K KS + ++ + D F++E ++ Q + NV+
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNVIH 72
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKK-GNLSWERRLRITAETAGVLSYLHSETNVP 520
L G ++ +++ EF+ NG+L + + G + + + + A + YL ++
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 129
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG-----YLDPEYLQT 575
+HR + + NIL++ N KVSDFG S+ + D + T G + PE +Q
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 576 CKLTDKSDVYSFGVVLVELLT 596
K T SDV+S+G+V+ E+++
Sbjct: 189 RKFTSASDVWSYGIVMWEVMS 209
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ T VAVK K ++ F+ E V+ + +V+L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 252
Query: 469 TQVPL-LVYEFVGNGTLFEHIH--KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRD 525
T+ P+ ++ EF+ G+L + + + + + +A+ A ++++ IHRD
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRD 309
Query: 526 VKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVY 585
+++ANIL+ + K++DFG ++++ + + + + PE + T KSDV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 586 SFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLK 643
SFG++L+E++T G++ PE R+L + +N +
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN-----------------CPE 412
Query: 644 EVAKLAARCISVRGEERPTMKEV 666
E+ + RC R EERPT + +
Sbjct: 413 ELYNIMMRCWKNRPEERPTFEYI 435
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+ G +F H+ +
Sbjct: 76 KQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+++D+ KV+DFG +K V
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 29/268 (10%)
Query: 409 IGCGGSGNVYKGF-LPDRTPVAVKKSKFVD----QAKIDEFINELVVVLQINRRNVVRLL 463
IG G VY+ L D PVA+KK + D +A+ D I E+ ++ Q+N NV++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKYY 98
Query: 464 GCCLETQVPLLVYEFVGNGTL---FEHIHKKGNLSWERRL-RITAETAGVLSYLHSETNV 519
+E +V E G L +H K+ L ER + + + L ++HS
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-- 156
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
++HRD+K AN+ + K+ D G + ++V GT Y+ PE +
Sbjct: 157 -VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYN 214
Query: 580 DKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILD-NRIVNDGN 638
KSD++S G +L E+ + DK MN S K+ +E D + +D
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYGDK--------MNLYSLCKK---IEQCDYPPLPSDHY 263
Query: 639 KQQLKEVAKLAARCISVRGEERPTMKEV 666
++L+++ + CI+ E+RP + V
Sbjct: 264 SEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 450 VVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
++ +N VV+L +T+ L L+ +F+ G LF + K+ + E AE A
Sbjct: 83 ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 141
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
L +LHS + II+RD+K NILLDE K++DFG SK ID + GT+ Y+
Sbjct: 142 GLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEA-IDHEKKAYSFCGTVEYM 197
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM-------NFLSSLK 621
PE + + +D +S+GV++ E+LTG + +E +L + FLS+
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEA 257
Query: 622 QNRLLEILDNRIVN 635
Q+ L + N
Sbjct: 258 QSLLRALFKRNPAN 271
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 405 YADVIGCGGSGNVYKGFLPD---RTPVAVKKSK-FVDQAKIDEFINELVVVLQINRR-NV 459
+ DVIG G G V K + R A+K+ K + + +F EL V+ ++ N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 460 VRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS---YLHSE 516
+ LLG C L E+ +G L + + K L + I TA LS LH
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 517 TNVP----------IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+V IHR++ + NIL+ EN K++DFG S+ + V+ T+G
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV-------YVKKTMG 198
Query: 567 YLDPEYLQTCKL-----TDKSDVYSFGVVLVELLT 596
L ++ L T SDV+S+GV+L E+++
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V + +GN Y + D K K
Sbjct: 20 LKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD-------KQKV 72
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 73 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX 132
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 133 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 189
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 190 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE + +N +V+L + +V E+ G +F H+ +
Sbjct: 77 KQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRI 136
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+L+D+ KV+DFG +K V
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 193
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 194 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKF 435
L K S A++ + IKT+ T ++ V + SGN Y + D K K
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G S
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT L PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L C + + + NG L ++I
Sbjct: 70 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIR 129
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 130 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 186
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 187 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 40/304 (13%)
Query: 408 VIGCGGSGNVYKGFLPDR----TPVAVK--KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
++G G G+V + L VAVK K+ + + I+EF+ E + + + +V +
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 462 LLGCCLETQ------VPLLVYEFVGNGTLFEHI------HKKGNLSWERRLRITAETAGV 509
L+G L ++ +P+++ F+ +G L + NL + +R + A
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS-KLVPIDAIQNCTVVQGTLGYL 568
+ YL S IHRD+ + N +L E+ T V+DFG S K+ D + + + +L
Sbjct: 150 MEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEI 628
E L T SDV++FGV + E++T + E + N+L + NRL +
Sbjct: 207 ALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI---ENAEIYNYL--IGGNRLKQ- 260
Query: 629 LDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ---GRLSLMSNGQYYLR 685
+ ++EV L +C S ++RP+ + +EL+ G LS++S Q L
Sbjct: 261 ---------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLY 311
Query: 686 DNVE 689
N+E
Sbjct: 312 INIE 315
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 27 LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 27 LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 79
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX 139
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 140 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 197 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 424 DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGT 483
D+ VAVK K +F E ++ + ++V+ G C+E ++V+E++ +G
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 484 LFEHIHKKG-------------NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L + + G L+ + L I + A + YL S+ +HRD+ + N
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRN 158
Query: 531 ILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGV 589
L+ EN K+ DFG S+ V D + + ++ PE + K T +SDV+S GV
Sbjct: 159 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGV 218
Query: 590 VLVELLT 596
VL E+ T
Sbjct: 219 VLWEIFT 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 486 EHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ K K + + L+ T++ + YL ++ IHR++ + NIL++ K+ DF
Sbjct: 103 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENRVKIGDF 159
Query: 545 GASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 160 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 219
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 220 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 276
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 277 RPSFRDLALRV 287
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKTV-TNNYADVIGCGG--SGNVYKGFLPDRTPVAVKKSKF 435
L K + A + E IKT+ T ++ V+ +GN Y + D K K
Sbjct: 28 LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-------KQKV 80
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
V +I+ +NE ++ +N +V+L + +V E+V G +F H+ + G
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX 140
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
A+ YLHS + +I+RD+K N+L+D+ +V+DFG +K V
Sbjct: 141 EPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 198 XLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 390 AKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPD---RTPVAVKKSKFVDQA---KIDE 443
A++F +++ + + ++ + IG G G VY F D VA+KK + + K +
Sbjct: 44 AELFFKDDPEKLFSDLRE-IGHGSFGAVY--FARDVRNSEVVAIKKMSYSGKQSNEKWQD 100
Query: 444 FINELVVVLQINRRNVVRLLGCCLETQVPLLVYEF-VGNGTLFEHIHKKGNLSWERRLRI 502
I E+ + ++ N ++ GC L LV E+ +G+ + +HKK + + I
Sbjct: 101 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEI 156
Query: 503 TAETAGVL---SYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCT 559
A T G L +YLHS +IHRDVK+ NILL E K+ DFG++ ++ A N
Sbjct: 157 AAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXF 210
Query: 560 VVQGTLGYLDPEYLQTC---KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
V GT ++ PE + + K DV+S G+ +EL K L + AM+
Sbjct: 211 V--GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSA 261
Query: 617 LSSLKQN 623
L + QN
Sbjct: 262 LYHIAQN 268
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ T VAVK K ++ F+ E V+ + +V+L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 79
Query: 469 TQVPL-LVYEFVGNGTLFEHIH--KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRD 525
T+ P+ ++ EF+ G+L + + + + + +A+ A ++++ IHRD
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRD 136
Query: 526 VKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVY 585
+++ANIL+ + K++DFG ++++ + + + + PE + T KSDV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 586 SFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLK 643
SFG++L+E++T G++ PE R+L + +N +
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN-----------------CPE 239
Query: 644 EVAKLAARCISVRGEERPTMKEV 666
E+ + RC R EERPT + +
Sbjct: 240 ELYNIMMRCWKNRPEERPTFEYI 262
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 409 IGCGGSGNVYK------GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+K G + R + ++ + A ++ I EL V+ + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + E + G+L + + K G + + +++ L+YL + I+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRDVK +NIL++ K+ DFG S + ID++ N V GT Y+ PE LQ + +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV--GTRSYMSPERLQGTHYSVQS 184
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
D++S G+ LVE+ G+ + P + + L + F
Sbjct: 185 DIWSMGLSLVEMAVGRYPI---PPPDAKELELMF 215
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVY----KGFLPDR--TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY KG + D T VA+K ++ + EF+NE V+ + N +VVR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L++ E + G L ++ S + +++ E A ++
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL++ +HRD+ + N + E+ T K+ DFG ++ D + +G G
Sbjct: 140 YLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 192
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SDV+SFGVVL E+ T L+++P
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQP 227
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+ G +F H+ +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+++D+ +V+DFG +K V
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 409 IGCGGSGNVYK------GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+K G + R + ++ + A ++ I EL V+ + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + E + G+L + + K G + + +++ L+YL + I+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRDVK +NIL++ K+ DFG S + ID++ N V GT Y+ PE LQ + +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV--GTRSYMSPERLQGTHYSVQS 184
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
D++S G+ LVE+ G+ + P + + L + F
Sbjct: 185 DIWSMGLSLVEMAVGRYPI---PPPDAKELELMF 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 31/245 (12%)
Query: 390 AKIFTEEEIKTVTNNYADVIGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQA---KIDEFI 445
A++F +++ + + ++ + IG G G VY + + VA+KK + + K + I
Sbjct: 5 AELFFKDDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII 63
Query: 446 NELVVVLQINRRNVVRLLGCCLETQVPLLVYEF-VGNGTLFEHIHKKGNLSWERRLRITA 504
E+ + ++ N ++ GC L LV E+ +G+ + +HKK + + I A
Sbjct: 64 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPL----QEVEIAA 119
Query: 505 ETAGVL---SYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
T G L +YLHS +IHRDVK+ NILL E K+ DFG++ ++ A N V
Sbjct: 120 VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXFV- 172
Query: 562 QGTLGYLDPEYLQTC---KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
GT ++ PE + + K DV+S G+ +EL K L + AM+ L
Sbjct: 173 -GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALY 224
Query: 619 SLKQN 623
+ QN
Sbjct: 225 HIAQN 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 37/298 (12%)
Query: 392 IFTEEEIKTVTNNYADVIGCGGSGNV---YKGFLPDRTP--VAVKKSKFVDQAKIDEFIN 446
IF E +K ++ +G G G+V L D T VAVK+ + + +F
Sbjct: 6 IFEERHLKYISQ-----LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 447 ELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRIT 503
E+ ++ ++ +V+ G Q LV E++ +G L + + + + L R L +
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV-- 561
++ + YL S +HRD+ + NIL++ K++DFG +KL+P+D ++ VV
Sbjct: 121 SQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLD--KDYYVVRE 175
Query: 562 --QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSS 619
Q + + PE L + +SDV+SFGVVL EL T DK S + FL
Sbjct: 176 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT-----YCDK---SCSPSAEFLRM 227
Query: 620 LKQNRLLEILDNRIVNDGNKQQL-------KEVAKLAARCISVRGEERPTMKEVSLEL 670
+ R + L + Q+L EV +L C + ++RP+ + +L
Sbjct: 228 MGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 285
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI----------DEFINELVVVLQINRRN 458
+G G G V+K V+ K S V K+ ++ I EL V+ + N
Sbjct: 76 LGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 459 VVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETN 518
+V G + E + G+L + + K G + + +++ L+YL +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
I+HRDVK +NIL++ K+ DFG S + ID++ N V GT Y+ PE LQ
Sbjct: 188 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV--GTRSYMSPERLQGTHY 242
Query: 579 TDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
+ +SD++S G+ LVE+ G+ + P + + L + F
Sbjct: 243 SVQSDIWSMGLSLVEMAVGRYPI---PPPDAKELELMF 277
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+ G +F H+ +
Sbjct: 76 KQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+++D+ +V+DFG +K V
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 409 IGCGGSGNVYK------GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+K G + R + ++ + A ++ I EL V+ + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + E + G+L + + K G + + +++ L+YL + I+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRDVK +NIL++ K+ DFG S + ID++ N V GT Y+ PE LQ + +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV--GTRSYMSPERLQGTHYSVQS 184
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
D++S G+ LVE+ G+ + P + + L + F
Sbjct: 185 DIWSMGLSLVEMAVGRYPI---PPPDAKELELMF 215
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 409 IGCGGSGNVYK------GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+K G + R + ++ + A ++ I EL V+ + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + E + G+L + + K G + + +++ L+YL + I+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRDVK +NIL++ K+ DFG S + ID++ N V GT Y+ PE LQ + +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV--GTRSYMSPERLQGTHYSVQS 184
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
D++S G+ LVE+ G+ + P + + L + F
Sbjct: 185 DIWSMGLSLVEMAVGRYPI---PPPDAKELELMF 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 14/224 (6%)
Query: 376 RQELSKLHGQSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKF 435
R++L KL S K EE+ V +G G G+VYK + + K
Sbjct: 12 RRQLKKLDEDSLTKQP----EEVFDVLEK----LGEGSYGSVYKAIHKETGQIVAIKQVP 63
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH-KKGNL 494
V+ + + E I E+ ++ Q + +VV+ G + +V E+ G G++ + I + L
Sbjct: 64 VE-SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL 122
Query: 495 SWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA 554
+ + I T L YLH IHRD+K+ NILL+ K++DFG + + D
Sbjct: 123 TEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL-TDX 178
Query: 555 IQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
+ V GT ++ PE +Q +D++S G+ +E+ GK
Sbjct: 179 MAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 409 IGCGGSGNVYK------GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+K G + R + ++ + A ++ I EL V+ + N +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGF 96
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + E + G+L + + K G + + +++ L+YL + I+
Sbjct: 97 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 154
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRDVK +NIL++ K+ DFG S + ID++ N V GT Y+ PE LQ + +S
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV--GTRSYMSPERLQGTHYSVQS 211
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
D++S G+ LVE+ G+ + P + + L + F
Sbjct: 212 DIWSMGLSLVEMAVGRYPI---PPPDAKELELMF 242
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N + +L + +V E+ G +F H+ +
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 136
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+++D+ KV+DFG +K V
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 194 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ G T VA+K K + + F+ E ++ ++ +V+L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 469 TQVPLLVYEFVGNGTLFEHIHKKGN---LSWERRLRITAETAGVLSYLHSETNVPIIHRD 525
+ +V E++ G+L + + K G L + + A+ A ++Y+ + IHRD
Sbjct: 76 EPI-YIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 130
Query: 526 VKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVY 585
++SANIL+ K++DFG ++L+ + + + + PE + T KSDV+
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 586 SFGVVLVELLT 596
SFG++L EL+T
Sbjct: 191 SFGILLTELVT 201
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N + +L + +V E+ G +F H+ +
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 136
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G S A+ YLHS + +I+RD+K N+++D+ KV+DFG +K V
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 194 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N +V+L + +V E+ G +F H+ +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G A+ YLHS + +I+RD+K N+++D+ KV+DFG +K V
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 193 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 424 DRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGT 483
D+ VAVK K A +F E ++ + ++V+ G C + ++V+E++ +G
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 484 L--FEHIH--------------KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVK 527
L F H KG L + L I ++ A + YL S+ +HRD+
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLA 160
Query: 528 SANILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYS 586
+ N L+ N K+ DFG S+ V D + + ++ PE + K T +SDV+S
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 220
Query: 587 FGVVLVELLT 596
FGV+L E+ T
Sbjct: 221 FGVILWEIFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 14/251 (5%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLF 485
VAVKK + + + +F E+ ++ + N+V+ G C + L+ E++ G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 486 EHIHKKG-NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+++ + + L+ T++ + YL ++ IHRD+ + NIL++ K+ DF
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 161
Query: 545 GASKLVPIDAIQNCTVVQGT--LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL 602
G +K++P D G + + PE L K + SDV+SFGVVL EL T
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDN--RIVN-DGNKQQLKEVAKLAARCISVRGEE 659
S E R + + + L+E+L N R+ DG E+ + C + +
Sbjct: 222 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD---EIYMIMTECWNNNVNQ 278
Query: 660 RPTMKEVSLEL 670
RP+ ++++L +
Sbjct: 279 RPSFRDLALRV 289
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTP------VAVK--KSKFVDQAKIDEFINE 447
+EI +VIG G G V +G L + P VA+K K + ++ + EF++E
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRL--KAPGKKESCVAIKTLKGGYTERQR-REFLSE 65
Query: 448 LVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAET 506
++ Q N++RL G + +++ EF+ NG L + G + +++
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT---VIQLVGML 122
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
G+ S + + +HRD+ + NIL++ N KVSDFG S+ ++ + +LG
Sbjct: 123 RGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF--LEENSSDPTYTSSLG 180
Query: 567 ------YLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ PE + K T SD +S+G+V+ E+++
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 409 IGCGGSGNVYK------GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+K G + R + ++ + A ++ I EL V+ + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + E + G+L + + K G + + +++ L+YL + I+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRDVK +NIL++ K+ DFG S + ID++ N V GT Y+ PE LQ + +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV--GTRSYMSPERLQGTHYSVQS 184
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSL 620
D++S G+ LVE+ G+ + +E+ M L
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELL 222
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
VAVK Q + + NE+V++ NVV + L + ++ EF+ G L +
Sbjct: 73 VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD- 131
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
I + L+ E+ + L+YLH++ +IHRD+KS +ILL + K+SDFG
Sbjct: 132 IVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFC 188
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
+ D + +V GT ++ PE + + D++S G++++E++ G+ SD P
Sbjct: 189 AQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP 246
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 392 IFTEEEIKTVTNNYADVIGCGGSGNV---YKGFLPDRTP--VAVKKSKFVDQAKIDEFIN 446
IF E +K ++ +G G G+V L D T VAVK+ + + +F
Sbjct: 3 IFEERHLKYISQ-----LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 57
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVP--LLVYEFVGNGTLFEHIHK-KGNLSWERRLRIT 503
E+ ++ ++ +V+ G P LV E++ +G L + + + + L R L +
Sbjct: 58 EIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 117
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV-- 561
++ + YL S +HRD+ + NIL++ K++DFG +KL+P+D ++ VV
Sbjct: 118 SQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLD--KDXXVVRE 172
Query: 562 --QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
Q + + PE L + +SDV+SFGVVL EL T
Sbjct: 173 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKID----EFINELVVVLQINRRNVVRLLG 464
+G G GNVY + K F Q + + + E+ + + N++R+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
+ + L+ EF G L++ + K G +R E A L Y H +IHR
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHR 139
Query: 525 DVKSANILLDENCTPKVSDFGASKLVP-IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSD 583
D+K N+L+ K++DFG S P + C GTL YL PE ++ +K D
Sbjct: 140 DIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVD 195
Query: 584 VYSFGVVLVELLTG 597
++ GV+ E L G
Sbjct: 196 LWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKID----EFINELVVVLQINRRNVVRLLG 464
+G G GNVY + K F Q + + + E+ + + N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
+ + L+ EF G L++ + K G +R E A L Y H +IHR
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVP-IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSD 583
D+K N+L+ K++DFG S P + C GTL YL PE ++ +K D
Sbjct: 139 DIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVD 194
Query: 584 VYSFGVVLVELLTG 597
++ GV+ E L G
Sbjct: 195 LWCAGVLCYEFLVG 208
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 125/280 (44%), Gaps = 38/280 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 117 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 278
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQY 682
E+ + C +RPT K++ +L ++L SN +Y
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEY 318
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKID----EFINELVVVLQINRRNVVRLLG 464
+G G GNVY + K F Q + + + E+ + + N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
+ + L+ EF G L++ + K G +R E A L Y H +IHR
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHR 138
Query: 525 DVKSANILLDENCTPKVSDFGASKLVP-IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSD 583
D+K N+L+ K++DFG S P + C GTL YL PE ++ +K D
Sbjct: 139 DIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVD 194
Query: 584 VYSFGVVLVELLTG 597
++ GV+ E L G
Sbjct: 195 LWCAGVLCYEFLVG 208
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTP------VAVK--KSKFVDQAKIDEFINE 447
+EI +VIG G G V +G L + P VA+K K + ++ + EF++E
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRL--KAPGKKESCVAIKTLKGGYTERQR-REFLSE 67
Query: 448 LVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAET 506
++ Q N++RL G + +++ EF+ NG L + G + +++
Sbjct: 68 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT---VIQLVGML 124
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
G+ S + + +HRD+ + NIL++ N KVSDFG S+ ++ + +LG
Sbjct: 125 RGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF--LEENSSDPTETSSLG 182
Query: 567 ------YLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ PE + K T SD +S+G+V+ E+++
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 408 VIGCGGSGNVYKGFLPDR----TPVAVKKSKF--VDQAKIDEFINELVVVLQINRRNVVR 461
++G G G+V +G L VAVK K Q +I+EF++E + + NV+R
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 462 LLGCCLETQV-----PLLVYEFVGNGTLFEHI------HKKGNLSWERRLRITAETAGVL 510
LLG C+E P+++ F+ G L ++ ++ + L+ + A +
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 511 SYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS-KLVPIDAIQNCTVVQGTLGYLD 569
YL +N +HRD+ + N +L ++ T V+DFG S K+ D + + + + ++
Sbjct: 161 EYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 570 PEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
E L T KSDV++FGV + E+ T M
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIATRGM 247
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 37/298 (12%)
Query: 392 IFTEEEIKTVTNNYADVIGCGGSGNV---YKGFLPDRTP--VAVKKSKFVDQAKIDEFIN 446
IF E +K ++ +G G G+V L D T VAVK+ + + +F
Sbjct: 19 IFEERHLKYISQ-----LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 73
Query: 447 ELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRIT 503
E+ ++ ++ +V+ G Q LV E++ +G L + + + + L R L +
Sbjct: 74 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 133
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV-- 561
++ + YL S +HRD+ + NIL++ K++DFG +KL+P+D ++ VV
Sbjct: 134 SQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLD--KDYYVVRE 188
Query: 562 --QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSS 619
Q + + PE L + +SDV+SFGVVL EL T DK S + FL
Sbjct: 189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT-----YCDK---SCSPSAEFLRM 240
Query: 620 LKQNRLLEILDNRIVNDGNKQQL-------KEVAKLAARCISVRGEERPTMKEVSLEL 670
+ R + L + Q+L EV +L C + ++RP+ + +L
Sbjct: 241 MGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ R + L +T L V E+ G LF H+ ++ + ER AE
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 122
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHS +++RD+K N++LD++ K++DFG K + I + ++ GT
Sbjct: 123 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPE 175
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLL 626
YL PE L+ D + GVV+ E++ G++ + + ER + + ++ R L
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRFPRTL 233
Query: 627 EILDNRIVNDGNKQQLKEVAKLAARCISVRGEER----PT-MKEVSLELQGRLSLMSNGQ 681
E L A + ++R P+ KEV ++ R L N Q
Sbjct: 234 S---------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEV---MEHRFFLSINWQ 275
Query: 682 YYLRDNV------ESNGVQETEYFTSTFYECRNGIGSHTTPTDGYDSVQQLEL 728
++ + + +T YF F I TP D YDS+ LEL
Sbjct: 276 DVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITI----TPPDRYDSLGLLEL 324
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ R + L +T L V E+ G LF H+ ++ + ER AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHS +++RD+K N++LD++ K++DFG K + I + ++ GT
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPE 170
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLL 626
YL PE L+ D + GVV+ E++ G++ + + ER + + ++ R L
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRFPRTL 228
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ R + L +T L V E+ G LF H+ ++ + ER AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHS +++RD+K N++LD++ K++DFG K + I + ++ GT
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPE 170
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLL 626
YL PE L+ D + GVV+ E++ G++ + + ER + + ++ R L
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRFPRTL 228
Query: 627 EILDNRIVNDGNKQQLKEVAKLAARCISVRGEER----PT-MKEVSLELQGRLSLMSNGQ 681
E L A + ++R P+ KEV ++ R L N Q
Sbjct: 229 S---------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEV---MEHRFFLSINWQ 270
Query: 682 YYLRDNV------ESNGVQETEYFTSTFYECRNGIGSHTTPTDGYDSVQQLEL 728
++ + + +T YF F I TP D YDS+ LEL
Sbjct: 271 DVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITI----TPPDRYDSLGLLEL 319
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
VAVKK Q + + NE+V++ + NVV + L +V EF+ G L +
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD- 131
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
I ++ E+ + LSYLH++ +IHRD+KS +ILL + K+SDFG
Sbjct: 132 IVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFC 188
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
V + + +V GT ++ PE + + D++S G++++E++ G+ ++ P
Sbjct: 189 AQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP 246
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ R + L +T L V E+ G LF H+ ++ + ER AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHS +++RD+K N++LD++ K++DFG K + I + ++ GT
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPE 170
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLL 626
YL PE L+ D + GVV+ E++ G++ + + ER + + ++ R L
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRFPRTL 228
Query: 627 EILDNRIVNDGNKQQLKEVAKLAARCISVRGEER----PT-MKEVSLELQGRLSLMSNGQ 681
E L A + ++R P+ KEV ++ R L N Q
Sbjct: 229 S---------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEV---MEHRFFLSINWQ 270
Query: 682 YYLRDNV------ESNGVQETEYFTSTFYECRNGIGSHTTPTDGYDSVQQLEL 728
++ + + +T YF F I TP D YDS+ LEL
Sbjct: 271 DVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITI----TPPDRYDSLGLLEL 319
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 115 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 409 IGCGGSGNVYK------GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+K G + R + ++ + A ++ I EL V+ + N +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGF 88
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + E + G+L + + K G + + +++ L+YL + I+
Sbjct: 89 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 146
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRDVK +NIL++ K+ DFG S + ID++ N V GT Y+ PE LQ + +S
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV--GTRSYMSPERLQGTHYSVQS 203
Query: 583 DVYSFGVVLVELLTGK 598
D++S G+ LVE+ G+
Sbjct: 204 DIWSMGLSLVEMAVGR 219
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ R + L +T L V E+ G LF H+ ++ + ER AE
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 120
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHS +++RD+K N++LD++ K++DFG K + I + ++ GT
Sbjct: 121 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPE 173
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLL 626
YL PE L+ D + GVV+ E++ G++ + + ER + + ++ R L
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRFPRTL 231
Query: 627 EILDNRIVNDGNKQQLKEVAKLAARCISVRGEER----PT-MKEVSLELQGRLSLMSNGQ 681
E L A + ++R P+ KEV ++ R L N Q
Sbjct: 232 S---------------PEAKSLLAGLLKKDPKQRLGGGPSDAKEV---MEHRFFLSINWQ 273
Query: 682 YYLRDNV------ESNGVQETEYFTSTFYECRNGIGSHTTPTDGYDSVQQLEL 728
++ + + +T YF F I TP D YDS+ LEL
Sbjct: 274 DVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITI----TPPDRYDSLGLLEL 322
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ R + L +T L V E+ G LF H+ ++ + ER AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHS +++RD+K N++LD++ K++DFG K + I + ++ GT
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPE 170
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLL 626
YL PE L+ D + GVV+ E++ G++ + + ER + + ++ R L
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRFPRTL 228
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 451 VLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV 509
VLQ R + L +T L V E+ G LF H+ ++ + ER AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLG 566
L YLHS +++RD+K N++LD++ K++DFG K + I + ++ GT
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPE 170
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLL 626
YL PE L+ D + GVV+ E++ G++ + + ER + + ++ R L
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRFPRTL 228
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVYKGFLPD------RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY+G D T VAVK ++ + EF+NE V+ +VVR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L+V E + +G L ++ + + + +++ AE A ++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL+++ +HRD+ + N ++ + T K+ DFG ++ D + +G G
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKGLLPVR 197
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SD++SFGVVL E+ + L+++P
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS-----LAEQP 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 432 KSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKK 491
K K V +I+ +NE ++ +N + +L + +V E+ G +F H+ +
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 136
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
G A+ YLHS + +I+RD+K N+++D+ KV+DFG +K V
Sbjct: 137 GRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
C GT YL PE + + D ++ GV++ E+ G +D+P
Sbjct: 194 GRTWXLC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 37/274 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSNGQY 682
C +RPT K++ +L L+L +N +Y
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEY 325
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 458 NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
N+V+L + LV E + G LFE I KK + S I + +S++H
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH--- 123
Query: 518 NVPIIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ 574
+V ++HRD+K N+L ++N K+ DFG ++L P D Q TL Y PE L
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPCFTLHYAAPELLN 182
Query: 575 TCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSL 612
+ D++S GV+L +L+G++ S +RSL
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQS----HDRSL 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 65 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR 124
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 125 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L + SD+++ G ++ +L+ G
Sbjct: 182 LSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID +N T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTP---VAVK-KSKFVDQAKIDEFINELVVV 451
E+I+ + + + DV+G G V D+ VA+K +K + K NE+ V+
Sbjct: 14 EDIRDIYD-FRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 452 LQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS 511
+I N+V L L+ + V G LF+ I +KG + R+ + +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 512 YLHSETNVPIIHRDVKSANIL---LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
YLH ++ I+HRD+K N+L LDE+ +SDFG SK+ D + GT GY+
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYV 185
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE L + D +S GV+ LL G
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 392 IFTEEEIKTVTNNYADVIGCGGSGNV---YKGFLPDRTP--VAVKKSKFVDQAKIDEFIN 446
IF E +K ++ +G G G+V L D T VAVK+ + + +F
Sbjct: 7 IFEERHLKYISQ-----LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 61
Query: 447 ELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRIT 503
E+ ++ ++ +V+ G Q LV E++ +G L + + + + L R L +
Sbjct: 62 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 121
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV-- 561
++ + YL S +HRD+ + NIL++ K++DFG +KL+P+D ++ VV
Sbjct: 122 SQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLD--KDYYVVRE 176
Query: 562 --QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
Q + + PE L + +SDV+SFGVVL EL T
Sbjct: 177 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 65 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 124
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 125 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 37/274 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 486 EHIHKKGNLSWERRLRI----------------TAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + E I T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSNGQY 682
C +RPT K++ +L L+L +N +Y
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEY 325
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 115 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 213
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 409 IGCGGSGNVYKGFLPD------RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY+G D T VAVK ++ + EF+NE V+ +VVR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L+V E + +G L ++ + + + +++ AE A ++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL+++ +HRD+ + N ++ + T K+ DFG ++ D + +G G
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 197
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVEL 594
++ PE L+ T SD++SFGVVL E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 409 IGCGGSGNVYKGFLPD------RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY+G D T VAVK ++ + EF+NE V+ +VVR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L+V E + +G L ++ + + + +++ AE A ++
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL+++ +HRD+ + N ++ + T K+ DFG ++ D + +G G
Sbjct: 142 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 194
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVEL 594
++ PE L+ T SD++SFGVVL E+
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 405 YADVIGCGGSGNVYKGFLPDRTPVAVKKSKF-VDQAKIDEFINELVVVLQINRRNVVRLL 463
+ +V+G G G K + V V K D+ F+ E+ V+ + NV++ +
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + + + E++ GTL I W +R+ + A ++YLHS II
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---II 130
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLV--------------PIDAIQNCTVVQGTLGYL 568
HRD+ S N L+ EN V+DFG ++L+ D + TVV G ++
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV-GNPYWM 189
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELL 595
PE + +K DV+SFG+VL E++
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTP---VAVK-KSKFVDQAKIDEFINELVVV 451
E+I+ + + + DV+G G V D+ VA+K +K + K NE+ V+
Sbjct: 14 EDIRDIYD-FRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 452 LQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS 511
+I N+V L L+ + V G LF+ I +KG + R+ + +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 512 YLHSETNVPIIHRDVKSANIL---LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
YLH ++ I+HRD+K N+L LDE+ +SDFG SK+ D + GT GY+
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYV 185
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE L + D +S GV+ LL G
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 63 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 122
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 123 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 179
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 180 LSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 409 IGCGGSGNVYKGFLPD------RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY+G D T VAVK ++ + EF+NE V+ +VVR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L+V E + +G L ++ + + + +++ AE A ++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL+++ +HRD+ + N ++ + T K+ DFG ++ D + +G G
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 197
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVEL 594
++ PE L+ T SD++SFGVVL E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTP---VAVK-KSKFVDQAKIDEFINELVVV 451
E+I+ + + + DV+G G V D+ VA+K +K + K NE+ V+
Sbjct: 14 EDIRDIYD-FRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 452 LQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS 511
+I N+V L L+ + V G LF+ I +KG + R+ + +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 512 YLHSETNVPIIHRDVKSANIL---LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
YLH ++ I+HRD+K N+L LDE+ +SDFG SK+ D + GT GY+
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYV 185
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE L + D +S GV+ LL G
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTP---VAVK-KSKFVDQAKIDEFINELVVV 451
E+I+ + + + DV+G G V D+ VA+K +K + K NE+ V+
Sbjct: 14 EDIRDIYD-FRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 452 LQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS 511
+I N+V L L+ + V G LF+ I +KG + R+ + +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 512 YLHSETNVPIIHRDVKSANIL---LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
YLH ++ I+HRD+K N+L LDE+ +SDFG SK+ D + GT GY+
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYV 185
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE L + D +S GV+ LL G
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 66 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 125
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 126 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 182
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 183 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 68 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 127
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 128 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 184
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 185 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 63 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 122
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 123 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 179
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 180 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 65 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 124
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 125 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 98 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 214
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 275 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 319
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
E+ + C +RPT K++ +L ++L SN +
Sbjct: 320 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 65 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 124
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 125 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 63 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 122
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 123 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 179
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 180 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 65 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 124
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 125 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 43 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 102
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 103 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 159
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 160 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 42 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 101
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 102 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 158
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 159 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 63 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 122
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 123 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 179
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 180 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 65 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 124
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 125 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 115 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 213
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 66 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 125
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 126 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 182
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 183 LSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 40 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 99
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 100 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 156
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 157 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 115 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 115 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 115 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 38/263 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLE 468
+G G G V+ T VAVK K ++ F+ E V+ + +V+L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 246
Query: 469 TQVPL-LVYEFVGNGTLFEHIH--KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRD 525
T+ P+ ++ EF+ G+L + + + + + +A+ A ++++ IHRD
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRD 303
Query: 526 VKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVY 585
+++ANIL+ + K++DFG +++ + + + PE + T KSDV+
Sbjct: 304 LRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 586 SFGVVLVELLT-GKMALLS-DKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLK 643
SFG++L+E++T G++ PE R+L + +N +
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN-----------------CPE 396
Query: 644 EVAKLAARCISVRGEERPTMKEV 666
E+ + RC R EERPT + +
Sbjct: 397 ELYNIMMRCWKNRPEERPTFEYI 419
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI----DEFINELVVVLQINRRNVVRLLG 464
+G G +G V +R K VD + + E+ + +N NVV+ G
Sbjct: 14 LGEGAAGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
E + L E+ G LF+ I + R + + YLH + I HR
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHR 128
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTLGYLDPEYLQTCKL-TDKS 582
D+K N+LLDE K+SDFG + + + + + GTL Y+ PE L+ + +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEE 608
DV+S G+VL +L G++ D+P +
Sbjct: 189 DVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 409 IGCGGSGNVYKGFLPD------RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY+G D T VAVK ++ + EF+NE V+ +VVR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L+V E + +G L ++ + + + +++ AE A ++
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL+++ +HRD+ + N ++ + T K+ DFG ++ D + +G G
Sbjct: 144 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 196
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVEL 594
++ PE L+ T SD++SFGVVL E+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 62 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 121
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 122 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 178
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 179 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 47 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 106
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 107 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 163
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 164 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 41 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 100
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 101 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 157
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 158 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 5/179 (2%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
VAVKK Q + + NE+V++ NVV + L +V EF+ G L +
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 237
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
I ++ E+ + LS LH++ +IHRD+KS +ILL + K+SDFG
Sbjct: 238 IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC 294
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
V + + +V GT ++ PE + + D++S G++++E++ G+ ++ P
Sbjct: 295 AQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 352
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
V+G G G V K D A+KK + ++ K+ ++E+ ++ +N + VVR
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 467 LETQ-------------VPLLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLS 511
LE + + E+ N TL++ IH + NL+ +R R+ + LS
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQRDEYWRLFRQILEALS 130
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV--PIDAIQ-----------NC 558
Y+HS+ IIHR++K NI +DE+ K+ DFG +K V +D ++ N
Sbjct: 131 YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 559 TVVQGTLGYLDPEYLQ-TCKLTDKSDVYSFGVVLVELL 595
T GT Y+ E L T +K D YS G++ E +
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 429 AVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLL-VYEFVGNGTLFEH 487
VKK D ID E V Q + + L C +T+ L V E+V G L H
Sbjct: 84 VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 143
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
+ ++ L E +AE + L+YLH II+RD+K N+LLD K++D+G
Sbjct: 144 MQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC 200
Query: 548 K--LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMAL---- 601
K L P D + GT Y+ PE L+ D ++ GV++ E++ G+
Sbjct: 201 KEGLRPGDT---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 257
Query: 602 LSDKPEE 608
SD P++
Sbjct: 258 SSDNPDQ 264
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 463 LGCCLETQVPLL-VYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPI 521
L CC +T L V EFV G L HI K R AE L +LH + I
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG---I 145
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
I+RD+K N+LLD K++DFG K + + T GT Y+ PE LQ
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC-GTPDYIAPEILQEMLYGPA 204
Query: 582 SDVYSFGVVLVELLTG 597
D ++ GV+L E+L G
Sbjct: 205 VDWWAMGVLLYEMLCG 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 409 IGCGGSGNVYKGFLPD------RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY+G D T VAVK ++ + EF+NE V+ +VVR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L+V E + +G L ++ + + + +++ AE A ++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL+++ +HRD+ + N ++ + T K+ DFG ++ D + +G G
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 197
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVEL 594
++ PE L+ T SD++SFGVVL E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 53 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 112
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 113 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 211
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 5/179 (2%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
VAVKK Q + + NE+V++ NVV + L +V EF+ G L +
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 160
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
I ++ E+ + LS LH++ +IHRD+KS +ILL + K+SDFG
Sbjct: 161 IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC 217
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
V + + +V GT ++ PE + + D++S G++++E++ G+ ++ P
Sbjct: 218 AQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 275
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 115 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 409 IGCGGSGNVYK------GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+G G G V+K G + R + ++ + A ++ I EL V+ + N +V
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGF 72
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G + E + G+L + + K G + + +++ L+YL + I+
Sbjct: 73 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 130
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRDVK +NIL++ K+ DFG S + ID + N V GT Y+ PE LQ + +S
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEMANEFV--GTRSYMSPERLQGTHYSVQS 187
Query: 583 DVYSFGVVLVELLTGK 598
D++S G+ LVE+ G+
Sbjct: 188 DIWSMGLSLVEMAVGR 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
++K + + K+ E V+ +++ V+L + + + NG L ++I
Sbjct: 62 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 121
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K G+ TAE L YLH + IIHRD+K NILL+E+ +++DFG +K+
Sbjct: 122 KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 178
Query: 550 VPIDAIQ-NCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
+ ++ Q GT Y+ PE L SD+++ G ++ +L+ G
Sbjct: 179 LSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 115 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 46 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 105
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 106 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 162
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 222
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 223 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 267
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
E+ + C +RPT K++ +L ++L SN +
Sbjct: 268 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 306
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ + +N NVV+ G E + L E+ G LF+ I + R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN-CTVVQGTL 565
+ YLH + I HRD+K N+LLDE K+SDFG + + + + + GTL
Sbjct: 114 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 566 GYLDPEYLQTCKL-TDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
Y+ PE L+ + + DV+S G+VL +L G++ D+P +
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSD 212
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 49 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 108
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 109 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 165
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 225
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 226 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 270
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
E+ + C +RPT K++ +L ++L SN +
Sbjct: 271 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 42 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 101
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 102 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 158
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 218
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 219 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 263
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
E+ + C +RPT K++ +L ++L SN +
Sbjct: 264 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 302
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 175
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 235
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 236 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 280
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 281 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 311
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKI------------DEFINELVVVLQINR 456
+G G GNVY KKS F+ K+ + E+ + ++
Sbjct: 31 LGKGKFGNVYLA--------REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
N++RL + + L+ E+ G L++ + K +R I E A L Y H +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
+IHRD+K N+LL K++DFG S P +++ T+ GTL YL PE ++
Sbjct: 143 K---VIHRDIKPENLLLGLKGELKIADFGWSVHAP--SLRRKTMC-GTLDYLPPEMIEGR 196
Query: 577 KLTDKSDVYSFGVVLVELLTG 597
+K D++ GV+ ELL G
Sbjct: 197 MHNEKVDLWCIGVLCYELLVG 217
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 5/179 (2%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
VAVKK Q + + NE+V++ NVV + L +V EF+ G L +
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 110
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
I ++ E+ + LS LH++ +IHRD+KS +ILL + K+SDFG
Sbjct: 111 IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC 167
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
V + + +V GT ++ PE + + D++S G++++E++ G+ ++ P
Sbjct: 168 AQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 225
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 5/179 (2%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
VAVKK Q + + NE+V++ NVV + L +V EF+ G L +
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 117
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
I ++ E+ + LS LH++ +IHRD+KS +ILL + K+SDFG
Sbjct: 118 IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC 174
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
V + + +V GT ++ PE + + D++S G++++E++ G+ ++ P
Sbjct: 175 AQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 232
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 117 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 278
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
E+ + C +RPT K++ +L ++L SN +
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 317
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 429 AVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLL-VYEFVGNGTLFEH 487
VKK D ID E V Q + + L C +T+ L V E+V G L H
Sbjct: 52 VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 111
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
+ ++ L E +AE + L+YLH II+RD+K N+LLD K++D+G
Sbjct: 112 MQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC 168
Query: 548 K--LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMAL---- 601
K L P D + GT Y+ PE L+ D ++ GV++ E++ G+
Sbjct: 169 KEGLRPGDT---TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 225
Query: 602 LSDKPEE 608
SD P++
Sbjct: 226 SSDNPDQ 232
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 117 SKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 278
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
E+ + C +RPT K++ +L ++L SN +
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 317
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 429 AVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLL-VYEFVGNGTLFEH 487
VKK D ID E V Q + + L C +T+ L V E+V G L H
Sbjct: 41 VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 100
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
+ ++ L E +AE + L+YLH II+RD+K N+LLD K++D+G
Sbjct: 101 MQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC 157
Query: 548 K--LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMAL---- 601
K L P D + GT Y+ PE L+ D ++ GV++ E++ G+
Sbjct: 158 KEGLRPGDT---TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 214
Query: 602 LSDKPEE 608
SD P++
Sbjct: 215 SSDNPDQ 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 5/179 (2%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
VAVKK Q + + NE+V++ NVV + L +V EF+ G L +
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 115
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
I ++ E+ + LS LH++ +IHRD+KS +ILL + K+SDFG
Sbjct: 116 IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC 172
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
V + + +V GT ++ PE + + D++S G++++E++ G+ ++ P
Sbjct: 173 AQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 230
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 430 VKKSKFVDQAKIDEFI-NELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEH 487
+KK+ V +AK E E V+ I + + L +T+ L L+ +++ G LF H
Sbjct: 90 LKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTH 149
Query: 488 IHKKGNLSWERRLRI-TAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGA 546
+ ++ + E ++I E L +LH + II+RD+K NILLD N ++DFG
Sbjct: 150 LSQRERFT-EHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 205
Query: 547 SKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL-TDKS-DVYSFGVVLVELLTG 597
SK D + GT+ Y+ P+ ++ DK+ D +S GV++ ELLTG
Sbjct: 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 50 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 109
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 110 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 166
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 226
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 227 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 271
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
E+ + C +RPT K++ +L ++L SN +
Sbjct: 272 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 310
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 458 NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
+++ L+ + LV++ + G LF+++ +K LS + I +S+LH+
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 518 NVPIIHRDVKSANILLDENCTPKVSDFGAS-KLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
I+HRD+K NILLD+N ++SDFG S L P + ++ GT GYL PE L+ C
Sbjct: 221 ---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC---GTPGYLAPEILK-C 273
Query: 577 KLTD-------KSDVYSFGVVLVELLTG 597
+ + + D+++ GV+L LL G
Sbjct: 274 SMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 37/273 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 486 EHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLTAR 173
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 233
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 234 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 278
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
C +RPT K++ +L L+L +N +
Sbjct: 279 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTNQE 311
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 178
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 238
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 239 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 283
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 284 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 314
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 429 AVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLL-VYEFVGNGTLFEH 487
VKK D ID E V Q + + L C +T+ L V E+V G L H
Sbjct: 37 VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 96
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
+ ++ L E +AE + L+YLH II+RD+K N+LLD K++D+G
Sbjct: 97 MQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC 153
Query: 548 K--LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMAL---- 601
K L P D + GT Y+ PE L+ D ++ GV++ E++ G+
Sbjct: 154 KEGLRPGDT---TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 210
Query: 602 LSDKPEE 608
SD P++
Sbjct: 211 SSDNPDQ 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 407 DVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI-NRRNVVRLLGC 465
+++G G G VYKG +A K V + +E E+ ++ + + RN+ G
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 466 CLETQVP------LLVYEFVGNGTLFEHI-HKKGN-LSWERRLRITAETAGVLSYLHSET 517
++ P LV EF G G++ + I + KGN L E I E LS+LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 518 NVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCK 577
+IHRD+K N+LL EN K+ DFG S + + T + GT ++ PE + +
Sbjct: 150 ---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDE 205
Query: 578 LTD-----KSDVYSFGVVLVELLTGKMALLSDKP 606
D KSD++S G+ +E+ G L P
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 239
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 423 PDR-TPVAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFV 479
P+R T VAVK K + + + I+E+ ++ I + +N++ LLG C + ++ E+
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 480 GNGTLFEHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIH 523
G L E++ + LS + + + A + YL S+ IH
Sbjct: 117 SKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+ + N+L+ E+ K++DFG A + ID + T + + ++ PE L T +S
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL 642
DV+SFGV+L E+ T + P EE L ++L D
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT 278
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMSNGQ 681
E+ + C +RPT K++ +L ++L SN +
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 317
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 5/179 (2%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
VAVKK Q + + NE+V++ NVV + L +V EF+ G L +
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 106
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
I ++ E+ + LS LH++ +IHRD+KS +ILL + K+SDFG
Sbjct: 107 IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC 163
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
V + + +V GT ++ PE + + D++S G++++E++ G+ ++ P
Sbjct: 164 AQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 221
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FV 133
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 95/200 (47%), Gaps = 25/200 (12%)
Query: 409 IGCGGSGNVY----KGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLG 464
+G G + VY KG + P A+K K KI E+ V+L+++ N+++L
Sbjct: 61 LGRGATSIVYRCKQKG---TQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHPNIIKL-K 114
Query: 465 CCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
ET + LV E V G LF+ I +KG S + ++YLH I+H
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG---IVH 171
Query: 524 RDVKSANILLDENCTP------KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCK 577
RD+K N+L TP K++DFG SK+V + V GT GY PE L+ C
Sbjct: 172 RDLKPENLLY---ATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYCAPEILRGCA 226
Query: 578 LTDKSDVYSFGVVLVELLTG 597
+ D++S G++ LL G
Sbjct: 227 YGPEVDMWSVGIITYILLCG 246
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 161
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 221
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 222 DVWMFGVCMWEIL 234
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 407 DVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINE--LVVVLQINRRNVVRLLG 464
++IG G G VYKG L +R PVAVK F ++ FINE + V + N+ R +
Sbjct: 19 ELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIV 74
Query: 465 CCLETQVP-----LLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET-- 517
LLV E+ NG+L +++ + W R+ L+YLH+E
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 518 ----NVPIIHRDVKSANILLDENCTPKVSDFGAS------KLVPIDAIQNCTVVQ-GTLG 566
I HRD+ S N+L+ + T +SDFG S +LV N + + GT+
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 567 YLDPEYLQ-TCKLTD------KSDVYSFGVVLVELL 595
Y+ PE L+ L D + D+Y+ G++ E+
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 136
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 196
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 197 DVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 130
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 191 DVWMFGVCMWEIL 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 135
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 195
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 196 DVWMFGVCMWEIL 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 138
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 198
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 199 DVWMFGVCMWEIL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 133
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVYKGFLPD------RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY+G D T VAVK ++ + EF+NE V+ +VVR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L+V E + +G L ++ + + + +++ AE A ++
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL+++ +HR++ + N ++ + T K+ DFG ++ D + +G G
Sbjct: 146 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 198
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SD++SFGVVL E+ + L+++P
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS-----LAEQP 233
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 133
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 486 EHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 232
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 293 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 337
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 338 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 409 IGCGGSGNVYKGFLPD------RTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR 461
+G G G VY+G D T VAVK ++ + EF+NE V+ +VVR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHK----------KGNLSWERRLRITAETAGVLS 511
LLG + Q L+V E + +G L ++ + + + +++ AE A ++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG----- 566
YL+++ +HR++ + N ++ + T K+ DFG ++ D + +G G
Sbjct: 145 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 197
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKP 606
++ PE L+ T SD++SFGVVL E+ + L+++P
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS-----LAEQP 232
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 39/226 (17%)
Query: 405 YADVIGCGGSGNVYKGFLPDRTP------VAVKKSKFVDQAKID---EFINELVVVLQIN 455
Y IG G G V++ P P VAVK K ++A D +F E ++ + +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK--EEASADMQADFQREAALMAEFD 108
Query: 456 RRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN---------------------- 493
N+V+LLG C + L++E++ G L E +
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 494 --LSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK-LV 550
LS +L I + A ++YL +HRD+ + N L+ EN K++DFG S+ +
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 551 PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
D + + ++ PE + + T +SDV+++GVVL E+ +
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVA-------VKKSKFVDQAKIDEFINEL 448
+ +K N+ V+G G G V L DR +KK + ++ + E
Sbjct: 14 DRVKLTDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEK 70
Query: 449 VVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETA 507
V+ +++ + L C +T L V E+V G L HI + G + + AE +
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 130
Query: 508 GVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGY 567
L +LH II+RD+K N++LD K++DFG K +D + GT Y
Sbjct: 131 IGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC-GTPDY 186
Query: 568 LDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
+ PE + D +++GV+L E+L G+
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 428 VAVK--KSKFVDQAK-IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
VAVK K + Q + +D+FI E+ + ++ RN++RL G L + + V E G+L
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 485 FEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
+ + K +G+ R + A + YL S+ IHRD+ + N+LL K+ D
Sbjct: 108 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGD 164
Query: 544 FGASKLVPIDAIQNCTVVQG----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
FG + +P + + V+Q + PE L+T + SD + FGV L E+ T
Sbjct: 165 FGLMRALPQN--DDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 407 DVIGCGGSGNV-YKGFLPDRTPVAVKKSKFVDQ-AKIDEFIN-ELVVVLQINRRNVVRLL 463
D + GSGN + D+ + K++++ A IDE + E++ + N+VR
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSW-ERRLRITAETAGVLSYLHSETNVPII 522
L ++ E+ G L+E I G S E R +GV SY HS + I
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV-SYCHS---MQIC 138
Query: 523 HRDVKSANILLDENCTP--KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
HRD+K N LLD + P K+ DFG SK + + TV GT Y+ PE L +
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLRQEYDG 196
Query: 581 K-SDVYSFGVVLVELLTGKMALLSDKPEEER 610
K +DV+S GV L +L G + PEE R
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPF--EDPEEPR 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FV 513
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ N K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 574 DVWMFGVCMWEIL 586
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN +++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 428 VAVK--KSKFVDQAK-IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
VAVK K + Q + +D+FI E+ + ++ RN++RL G L + + V E G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 485 FEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
+ + K +G+ R + A + YL S+ IHRD+ + N+LL K+ D
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGD 154
Query: 544 FGASKLVPIDAIQNCTVVQG----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
FG + +P + + V+Q + PE L+T + SD + FGV L E+ T
Sbjct: 155 FGLMRALPQN--DDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 428 VAVK--KSKFVDQAK-IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
VAVK K + Q + +D+FI E+ + ++ RN++RL G L + + V E G+L
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 485 FEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
+ + K +G+ R + A + YL S+ IHRD+ + N+LL K+ D
Sbjct: 108 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGD 164
Query: 544 FGASKLVPID----AIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
FG + +P + +Q V + PE L+T + SD + FGV L E+ T
Sbjct: 165 FGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQA-KIDEFIN-ELVVVLQINRRNVVRLLGCC 466
IG G G + D+ + K++++ KIDE + E++ + N+VR
Sbjct: 27 IGAGNFG--VARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 467 LETQVPLLVYEFVGNGTLFEHIHKKGNLSW-ERRLRITAETAGVLSYLHSETNVPIIHRD 525
L +V E+ G LFE I G S E R +GV SY H+ + + HRD
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYAHA---MQVAHRD 140
Query: 526 VKSANILLDENCTP--KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK-S 582
+K N LLD + P K++DFG SK + + V GT Y+ PE L + K +
Sbjct: 141 LKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV--GTPAYIAPEVLLKKEYDGKVA 198
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSL 612
DV+S GV L +L G A + PEE ++
Sbjct: 199 DVWSCGVTLYVMLVG--AYPFEDPEEPKNF 226
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 428 VAVK--KSKFVDQAK-IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
VAVK K + Q + +D+FI E+ + ++ RN++RL G L + + V E G+L
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 485 FEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
+ + K +G+ R + A + YL S+ IHRD+ + N+LL K+ D
Sbjct: 102 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGD 158
Query: 544 FGASKLVPID----AIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
FG + +P + +Q V + PE L+T + SD + FGV L E+ T
Sbjct: 159 FGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 428 VAVK--KSKFVDQAK-IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
VAVK K + Q + +D+FI E+ + ++ RN++RL G L + + V E G+L
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 485 FEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
+ + K +G+ R + A + YL S+ IHRD+ + N+LL K+ D
Sbjct: 102 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGD 158
Query: 544 FGASKLVPID----AIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
FG + +P + +Q V + PE L+T + SD + FGV L E+ T
Sbjct: 159 FGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
V+G G G VY G L ++ +A+K+ D E+ + + +N+V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 467 LETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
E + E V G+L + K + I T +L L + I+HRD+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 527 KSANILLDE-NCTPKVSDFGASKLVPIDAIQNCT-VVQGTLGYLDPEYLQTCK--LTDKS 582
K N+L++ + K+SDFG SK + I CT GTL Y+ PE + +
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 583 DVYSFGVVLVELLTGK 598
D++S G ++E+ TGK
Sbjct: 207 DIWSLGCTIIEMATGK 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 23/206 (11%)
Query: 409 IGCGGSGNVY----KGFLPDRTPVAVKKSKFV------DQAKIDEF----INELVVVLQI 454
+G G G V K ++ +KKS+F D I++F NE+ ++ +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 455 NRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLH 514
+ N+++L + + LV EF G LFE I + I + + YLH
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 515 SETNVPIIHRDVKSANILLDEN---CTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
I+HRD+K NILL+ K+ DFG S D + GT Y+ PE
Sbjct: 164 KHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL--GTAYYIAPE 218
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLTG 597
L+ K +K DV+S GV++ LL G
Sbjct: 219 VLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 428 VAVK--KSKFVDQAK-IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
VAVK K + Q + +D+FI E+ + ++ RN++RL G L + + V E G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 485 FEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
+ + K +G+ R + A + YL S+ IHRD+ + N+LL K+ D
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGD 154
Query: 544 FGASKLVPID----AIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
FG + +P + +Q V + PE L+T + SD + FGV L E+ T
Sbjct: 155 FGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 428 VAVK--KSKFVDQAK-IDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
VAVK K + Q + +D+FI E+ + ++ RN++RL G L + + V E G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 485 FEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
+ + K +G+ R + A + YL S+ IHRD+ + N+LL K+ D
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGD 154
Query: 544 FGASKLVPID----AIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
FG + +P + +Q V + PE L+T + SD + FGV L E+ T
Sbjct: 155 FGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWE--RRLR 501
+NE ++ ++N R VV L ET+ L LV + G L HI+ G + R +
Sbjct: 232 LNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
AE L LH E I++RD+K NILLD++ ++SD G + VP V
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV- 346
Query: 562 QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEER 610
GT+GY+ PE ++ + T D ++ G +L E++ G+ K + +R
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 446 NELVVVLQINRRNVVRLLGCCLETQVP--LLVYEFVGNGTLFEHIHKKGNLSWERRLRIT 503
E+ ++ + ++++ GCC + LV E+V G+L +++ + ++ + L
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFA 140
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ- 562
+ ++YLH++ IHRD+ + N+LLD + K+ DFG +K VP + + V +
Sbjct: 141 QQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEXYRVRED 196
Query: 563 --GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ + PE L+ K SDV+SFGV L ELLT
Sbjct: 197 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
V+G G G VY G L ++ +A+K+ D E+ + + +N+V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 467 LETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
E + E V G+L + K + I T +L L + I+HRD+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 527 KSANILLDE-NCTPKVSDFGASKLVPIDAIQNCT-VVQGTLGYLDPEYLQTCK--LTDKS 582
K N+L++ + K+SDFG SK + I CT GTL Y+ PE + +
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 192
Query: 583 DVYSFGVVLVELLTGK 598
D++S G ++E+ TGK
Sbjct: 193 DIWSLGCTIIEMATGK 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 9/170 (5%)
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWE--RRLR 501
+NE ++ ++N R VV L ET+ L LV + G L HI+ G + R +
Sbjct: 232 LNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
AE L LH E I++RD+K NILLD++ ++SD G + VP V
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV- 346
Query: 562 QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERS 611
GT+GY+ PE ++ + T D ++ G +L E++ G+ K + +R
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 408 VIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDE-----FINELVVVLQINRRNVVRL 462
++G G G V K DR K +++A + E+ ++ +++ N+++L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
++ +V E G LF+ I K+ S RI + ++Y+H I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IV 143
Query: 523 HRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
HRD+K NILL +++C K+ DFG S + + GT Y+ PE L+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLRGT-YD 200
Query: 580 DKSDVYSFGVVLVELLTG 597
+K DV+S GV+L LL+G
Sbjct: 201 EKCDVWSAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 408 VIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDE-----FINELVVVLQINRRNVVRL 462
++G G G V K DR K +++A + E+ ++ +++ N+++L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
++ +V E G LF+ I K+ S RI + ++Y+H I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IV 143
Query: 523 HRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCK 577
HRD+K NILL +++C K+ DFG S QN + GT Y+ PE L+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ----QNTKMKDRIGTAYYIAPEVLRGT- 198
Query: 578 LTDKSDVYSFGVVLVELLTG 597
+K DV+S GV+L LL+G
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 413 GSGNV-YKGFLPDRTPVAVKKSKFVDQA-KIDEFIN-ELVVVLQINRRNVVRLLGCCLET 469
GSGN + D+ + K++++ KIDE + E++ + N+VR L
Sbjct: 27 GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 86
Query: 470 QVPLLVYEFVGNGTLFEHIHKKGNLSW-ERRLRITAETAGVLSYLHSETNVPIIHRDVKS 528
+V E+ G LFE I G S E R +GV SY H+ + + HRD+K
Sbjct: 87 THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYCHA---MQVCHRDLKL 142
Query: 529 ANILLDENCTP--KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK-SDVY 585
N LLD + P K+ DFG SK + + TV GT Y+ PE L + K +DV+
Sbjct: 143 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVW 200
Query: 586 SFGVVLVELLTGKMALLSDKPEEERSL 612
S GV L +L G A + PEE ++
Sbjct: 201 SCGVTLYVMLVG--AYPFEDPEEPKNF 225
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
++ I EL V+ + N +V G + E + G+L + + + + E +
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK 118
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
++ L+YL + I+HRDVK +NIL++ K+ DFG S + ID++ N V
Sbjct: 119 VSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV- 174
Query: 562 QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMAL 601
GT Y+ PE LQ + +SD++S G+ LVEL G+ +
Sbjct: 175 -GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 458 NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
N+++L LV++ + G LF+++ +K LS + +I V+ LH
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH--- 128
Query: 518 NVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCK 577
+ I+HRD+K NILLD++ K++DFG S +D + V GT YL PE ++ C
Sbjct: 129 KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCGTPSYLAPEIIE-CS 185
Query: 578 LTD-------KSDVYSFGVVLVELLTG 597
+ D + D++S GV++ LL G
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 408 VIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDE-----FINELVVVLQINRRNVVRL 462
++G G G V K DR K +++A + E+ ++ +++ N+++L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
++ +V E G LF+ I K+ S RI + ++Y+H I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IV 143
Query: 523 HRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLGYLDPEYLQTC 576
HRD+K NILL +++C K+ DFG S Q T ++ GT Y+ PE L+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLST-----CFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 577 KLTDKSDVYSFGVVLVELLTG 597
+K DV+S GV+L LL+G
Sbjct: 199 -YDEKCDVWSAGVILYILLSG 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 458 NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
N+++L LV++ + G LF+++ +K LS + +I V+ LH
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH--- 141
Query: 518 NVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCK 577
+ I+HRD+K NILLD++ K++DFG S +D + V GT YL PE ++ C
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLRSVCGTPSYLAPEIIE-CS 198
Query: 578 LTD-------KSDVYSFGVVLVELLTG 597
+ D + D++S GV++ LL G
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 465 CCLETQVPLL-VYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
C +T+ L V E++ G L HI R AE L +LHS+ I++
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVY 141
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPI-DAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+K NILLD++ K++DFG K + DA N GT Y+ PE L K
Sbjct: 142 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC--GTPDYIAPEILLGQKYNHSV 199
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEE 608
D +SFGV+L E+L G+ EE
Sbjct: 200 DWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 441 IDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHK-KGNLSWE 497
I + E+ ++ + N+V+ G C E L+ EF+ +G+L E++ K K ++ +
Sbjct: 67 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK 126
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
++L+ + + YL S V HRD+ + N+L++ K+ DFG +K + D +
Sbjct: 127 QQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDK-EX 182
Query: 558 CTVV---QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
TV + + PE L K SDV+SFGV L ELLT
Sbjct: 183 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 441 IDEFINELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHK-KGNLSWE 497
I + E+ ++ + N+V+ G C E L+ EF+ +G+L E++ K K ++ +
Sbjct: 55 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK 114
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
++L+ + + YL S V HRD+ + N+L++ K+ DFG +K + D +
Sbjct: 115 QQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDK-EX 170
Query: 558 CTVV---QGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
TV + + PE L K SDV+SFGV L ELLT
Sbjct: 171 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 44/266 (16%)
Query: 428 VAVKKSKFVDQAKIDE-FINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K A E ++EL ++ + + N+V LLG C L++ E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 486 EHIHKKGN-LSWERRLRITAETAGVLSYLHSETNVP----------IIHRDVKSANILLD 534
+ +K L + I TA LH + V IHRDV + N+LL
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 535 ENCTPKVSDFGASKLVPIDAIQNCTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVV 590
K+ DFG ++ + D+ +V+G + ++ PE + C T +SDV+S+G++
Sbjct: 199 NGHVAKIGDFGLARDIMNDS---NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 591 LVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL-----KEV 645
L E+ SL +N + N ++V DG + K +
Sbjct: 256 LWEIF---------------SLGLNPYPGILVNSKFY----KLVKDGYQMAQPAFAPKNI 296
Query: 646 AKLAARCISVRGEERPTMKEVSLELQ 671
+ C ++ RPT +++ LQ
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 121/271 (44%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ + G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 428 VAVKKSKFVDQAKIDE-FINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K A E ++EL ++ + + N+V LLG C L++ E+ G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 486 EHIHKKGNLSWERR----------LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDE 535
+ +K ++ L +++ A +++L S+ IHRDV + N+LL
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTN 187
Query: 536 NCTPKVSDFGASKLVPIDAIQNCTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVVL 591
K+ DFG ++ + D+ +V+G + ++ PE + C T +SDV+S+G++L
Sbjct: 188 GHVAKIGDFGLARDIMNDS---NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 592 VELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL-----KEVA 646
E+ SL +N + N ++V DG + K +
Sbjct: 245 WEIF---------------SLGLNPYPGILVNSKF----YKLVKDGYQMAQPAFAPKNIY 285
Query: 647 KLAARCISVRGEERPTMKEVSLELQ 671
+ C ++ RPT +++ LQ
Sbjct: 286 SIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 9/218 (4%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVY----KGFLPDRTPVAVKKSKFVDQAKIDEFINELVVV 451
+ +K N+ V+G G G V KG +KK + ++ + E V+
Sbjct: 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 452 LQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVL 510
+ + L C +T L V E+V G L HI + G + AE A L
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL 455
Query: 511 SYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDP 570
+L S+ II+RD+K N++LD K++DFG K D + GT Y+ P
Sbjct: 456 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-GTPDYIAP 511
Query: 571 EYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
E + D ++FGV+L E+L G+ + +E
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 458 NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
N+++L LV++ + G LF+++ +K LS + +I V+ LH
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH--- 141
Query: 518 NVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCK 577
+ I+HRD+K NILLD++ K++DFG S +D + V GT YL PE ++ C
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCGTPSYLAPEIIE-CS 198
Query: 578 LTD-------KSDVYSFGVVLVELLTG 597
+ D + D++S GV++ LL G
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 428 VAVKKSKFVDQAKIDE-FINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K A E ++EL ++ + + N+V LLG C L++ E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 486 EHIHKKGNLSWERR----------LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDE 535
+ +K ++ L +++ A +++L S+ IHRDV + N+LL
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTN 195
Query: 536 NCTPKVSDFGASKLVPIDAIQNCTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVVL 591
K+ DFG ++ + D+ +V+G + ++ PE + C T +SDV+S+G++L
Sbjct: 196 GHVAKIGDFGLARDIMNDS---NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 592 VELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL-----KEVA 646
E+ SL +N + N ++V DG + K +
Sbjct: 253 WEIF---------------SLGLNPYPGILVNSKF----YKLVKDGYQMAQPAFAPKNIY 293
Query: 647 KLAARCISVRGEERPTMKEVSLELQ 671
+ C ++ RPT +++ LQ
Sbjct: 294 SIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 446 NELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT 503
E+ ++ + ++V+ GCC + + LV E+V G+L +++ + + + L
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFA 117
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ- 562
+ ++YLH++ IHR + + N+LLD + K+ DFG +K VP + + V +
Sbjct: 118 QQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVRED 173
Query: 563 --GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ + PE L+ CK SDV+SFGV L ELLT
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 446 NELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT 503
E+ ++ + ++V+ GCC + + LV E+V G+L +++ + + + L
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFA 118
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ- 562
+ ++YLH++ IHR + + N+LLD + K+ DFG +K VP + + V +
Sbjct: 119 QQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVRED 174
Query: 563 --GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ + PE L+ CK SDV+SFGV L ELLT
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 446 NELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAE 505
NE+ V+ +I N+V L LV + V G LF+ I +KG + + + +
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ 128
Query: 506 TAGVLSYLHSETNVPIIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQ 562
+ YLH + I+HRD+K N+L DE +SDFG SK+ + +
Sbjct: 129 VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC-- 183
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
GT GY+ PE L + D +S GV+ LL G
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FV 133
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 121/271 (44%), Gaps = 37/271 (13%)
Query: 428 VAVKKSKF-VDQAKIDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K + + + ++E+ ++ I + +N++ LLG C + ++ + G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 486 EHIHKK----------------GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
E++ + ++++ + T + A + YL S+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAAR 186
Query: 530 NILLDENCTPKVSDFGASKLV-PIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFG 588
N+L+ EN K++DFG ++ + ID + T + + ++ PE L T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 589 VVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKL 648
V++ E+ T + P EE L ++L D E+ +
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEE---------------LFKLLKEGHRMDKPANCTNELYMM 291
Query: 649 AARCISVRGEERPTMKEVSLELQGRLSLMSN 679
C +RPT K++ +L L+L +N
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 446 NELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAE 505
NE+ V+ +I N+V L T LV + V G LF+ I ++G + + + +
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 506 TAGVLSYLHSETNVPIIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQN--CTV 560
+ YLH I+HRD+K N+L +EN ++DFG SK+ QN +
Sbjct: 115 VLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKME-----QNGIMST 166
Query: 561 VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
GT GY+ PE L + D +S GV+ LL G
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 465 CCLETQVPLL-VYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
C +T+ L V E++ G L HI R AE L +LHS+ I++
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVY 142
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPI-DAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
RD+K NILLD++ K++DFG K + DA N GT Y+ PE L K
Sbjct: 143 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC--GTPDYIAPEILLGQKYNHSV 200
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEE 608
D +SFGV+L E+L G+ EE
Sbjct: 201 DWWSFGVLLYEMLIGQSPFHGQDEEE 226
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 9/218 (4%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVY----KGFLPDRTPVAVKKSKFVDQAKIDEFINELVVV 451
+ +K N+ V+G G G V KG +KK + ++ + E V+
Sbjct: 15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 452 LQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVL 510
+ + L C +T L V E+V G L HI + G + AE A L
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL 134
Query: 511 SYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDP 570
+L S+ II+RD+K N++LD K++DFG K D + GT Y+ P
Sbjct: 135 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-GTPDYIAP 190
Query: 571 EYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
E + D ++FGV+L E+L G+ + +E
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 27/287 (9%)
Query: 434 KFVDQAKID-----EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHI 488
K +D+ +++ + E+ ++ +N N+V+L + L+ E+ G +F+++
Sbjct: 46 KIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 105
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
G + + + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 106 VAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN 162
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMALLSDKPE 607
+ G Y PE Q K + DV+S GV+L L++G + +
Sbjct: 163 EFTVGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
Query: 608 EERSLAMN-------FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEE- 659
E R + ++S+ +N L L ++N + L+++ K R I+ EE
Sbjct: 221 ELRERVLRGKYRIPFYMSTDCENLLKRFL---VLNPIKRGTLEQIMK--DRWINAGHEED 275
Query: 660 --RPTMK-EVSLELQGRLSLMSNGQYYLRDNVESNGVQETEYFTSTF 703
+P ++ E+ + Q R+ +M Y + ES + + T+T+
Sbjct: 276 ELKPFVEPELDISDQKRIDIMVGMGYSQEEIQESLSKMKYDEITATY 322
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 409 IGCGGSGNVYKGFLPDR-TPVAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRL---- 462
+G GG G V + D VA+K+ + K E + E+ ++ ++N NVV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 463 --LGCCLETQVPLLVYEFVGNGTLFEHIHKKGN---LSWERRLRITAETAGVLSYLHSET 517
L +PLL E+ G L +++++ N L + ++ + L YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 518 NVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ 574
IIHRD+K NI+L + K+ D G +K +D + CT GTL YL PE L+
Sbjct: 142 ---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYLAPELLE 196
Query: 575 TCKLTDKSDVYSFGVVLVELLTG 597
K T D +SFG + E +TG
Sbjct: 197 QKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 409 IGCGGSGNVYKGFLPDR-TPVAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRL---- 462
+G GG G V + D VA+K+ + K E + E+ ++ ++N NVV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 463 --LGCCLETQVPLLVYEFVGNGTLFEHIHKKGN---LSWERRLRITAETAGVLSYLHSET 517
L +PLL E+ G L +++++ N L + ++ + L YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 518 NVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ 574
IIHRD+K NI+L + K+ D G +K +D + CT GTL YL PE L+
Sbjct: 143 ---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYLAPELLE 197
Query: 575 TCKLTDKSDVYSFGVVLVELLTG 597
K T D +SFG + E +TG
Sbjct: 198 QKKYTVTVDYWSFGTLAFECITG 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 409 IGCGGSGNVYKG-FLPDRTP---VAVKKSKFVDQAKIDE-FINELVVVLQINRRNVVRLL 463
IG G G+V++G ++ P VA+K K + E F+ E + + Q + ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
G E V ++ E G L + +K +L + + + L+YL S+ +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FV 513
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS 582
HRD+ + N+L+ K+ DFG S+ + + + + ++ PE + + T S
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 583 DVYSFGVVLVELL 595
DV+ FGV + E+L
Sbjct: 574 DVWMFGVCMWEIL 586
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 404 NYADVIGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINR 456
N +G G G V + F D+T VAVK K ++ ++EL +++ I
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 457 R-NVVRLLGCCLETQVPLLVY-EFVGNGTLFEHIHKKGN------------LSWERRLRI 502
NVV LLG C + PL+V EF G L ++ K N L+ E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 503 TAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ 562
+ + A + +L S IHRD+ + NILL E K+ DFG ++ D ++ V+
Sbjct: 150 SFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKIXDFGLAR----DIYKDPDYVR 202
Query: 563 G-----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
L ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 129/287 (44%), Gaps = 27/287 (9%)
Query: 434 KFVDQAKID-----EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHI 488
K +D+ +++ + E+ ++ +N N+V+L + L+ E+ G +F+++
Sbjct: 43 KIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 102
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
G + + + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 103 VAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN 159
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTD-KSDVYSFGVVLVELLTGKMALLSDKPE 607
+ G+ Y PE Q K + DV+S GV+L L++G + +
Sbjct: 160 EFTVGG--KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 217
Query: 608 EERSLAMN-------FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEE- 659
E R + ++S+ +N L L ++N + L+++ K R I+ EE
Sbjct: 218 ELRERVLRGKYRIPFYMSTDCENLLKRFL---VLNPIKRGTLEQIMK--DRWINAGHEED 272
Query: 660 --RPTMK-EVSLELQGRLSLMSNGQYYLRDNVESNGVQETEYFTSTF 703
+P ++ E+ + Q R+ +M Y + ES + + T+T+
Sbjct: 273 ELKPFVEPELDISDQKRIDIMVGMGYSQEEIQESLSKMKYDEITATY 319
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 50/269 (18%)
Query: 428 VAVKKSKFVDQAKIDE-FINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K A E ++EL ++ + + N+V LLG C L++ E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 486 EHIHKKG--------------NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANI 531
+ +K LS L +++ A +++L S+ IHRDV + N+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNV 195
Query: 532 LLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT----LGYLDPEYLQTCKLTDKSDVYSF 587
LL K+ DFG ++ + D+ +V+G + ++ PE + C T +SDV+S+
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDS---NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 588 GVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL----- 642
G++L E+ SL +N + N ++V DG +
Sbjct: 253 GILLWEIF---------------SLGLNPYPGILVNSKFY----KLVKDGYQMAQPAFAP 293
Query: 643 KEVAKLAARCISVRGEERPTMKEVSLELQ 671
K + + C ++ RPT +++ LQ
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 446 NELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT 503
E+ ++ + ++++ GCC + + LV E+V G+L +++ + ++ + L
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFA 123
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ- 562
+ ++YLHS+ IHR++ + N+LLD + K+ DFG +K VP + + V +
Sbjct: 124 QQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVRED 179
Query: 563 --GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ + PE L+ K SDV+SFGV L ELLT
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 52/271 (19%)
Query: 428 VAVKKSKFVDQAKIDE-FINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K A E ++EL ++ + + N+V LLG C L++ E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 486 EHIHKKG----------------NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSA 529
+ +K LS L +++ A +++L S+ IHRDV +
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAAR 195
Query: 530 NILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT----LGYLDPEYLQTCKLTDKSDVY 585
N+LL K+ DFG ++ + D+ +V+G + ++ PE + C T +SDV+
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIMNDS---NYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 252
Query: 586 SFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQL--- 642
S+G++L E+ SL +N + N ++V DG +
Sbjct: 253 SYGILLWEIF---------------SLGLNPYPGILVNSKF----YKLVKDGYQMAQPAF 293
Query: 643 --KEVAKLAARCISVRGEERPTMKEVSLELQ 671
K + + C ++ RPT +++ LQ
Sbjct: 294 APKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 408 VIGCGGSGNVYKGFLP----DRTPVAVKKSK---FVDQAKIDEFINELVVVLQINRRNVV 460
++G G G VY+G ++ VAVK K +D ++F++E V++ ++ ++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 76
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNV 519
+L+G +E + ++ E G L ++ + K +L + + + ++YL S +
Sbjct: 77 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 132
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
+HRD+ NIL+ K+ DFG S+ + + +V + + ++ PE + + T
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+ F V + E+L+
Sbjct: 193 TASDVWMFAVCMWEILS 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 446 NELVVVLQINRRNVVRLLGCCLET--QVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT 503
E+ ++ + ++++ GCC + + LV E+V G+L +++ + ++ + L
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFA 123
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ- 562
+ ++YLH++ IHR++ + N+LLD + K+ DFG +K VP + + V +
Sbjct: 124 QQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVRED 179
Query: 563 --GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
+ + PE L+ K SDV+SFGV L ELLT
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 408 VIGCGGSGNVYKGFLP----DRTPVAVKKSK---FVDQAKIDEFINELVVVLQINRRNVV 460
++G G G VY+G ++ VAVK K +D ++F++E V++ ++ ++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 72
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNV 519
+L+G +E + ++ E G L ++ + K +L + + + ++YL S +
Sbjct: 73 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 128
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
+HRD+ NIL+ K+ DFG S+ + + +V + + ++ PE + + T
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+ F V + E+L+
Sbjct: 189 TASDVWMFAVCMWEILS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 408 VIGCGGSGNVYKGFLP----DRTPVAVKKSK---FVDQAKIDEFINELVVVLQINRRNVV 460
++G G G VY+G ++ VAVK K +D ++F++E V++ ++ ++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 88
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHK-KGNLSWERRLRITAETAGVLSYLHSETNV 519
+L+G +E + ++ E G L ++ + K +L + + + ++YL S +
Sbjct: 89 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 144
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
+HRD+ NIL+ K+ DFG S+ + + +V + + ++ PE + + T
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 580 DKSDVYSFGVVLVELLT 596
SDV+ F V + E+L+
Sbjct: 205 TASDVWMFAVCMWEILS 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERR- 499
+E E+ V+ + N+V+ E +V ++ G LF+ I+ +KG L E +
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI 127
Query: 500 LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV--PIDAIQN 557
L + L ++H I+HRD+KS NI L ++ T ++ DFG ++++ ++ +
Sbjct: 128 LDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMAL 601
C GT YL PE + +KSD+++ G VL EL T K A
Sbjct: 185 CI---GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF 225
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 16/220 (7%)
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
++ + + + E+ ++ +N N+V+L + LV E+ G +F+++ G +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
+ + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-- 166
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM 614
G+ Y PE Q K + DV+S GV+L L++G + +E R +
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 615 N-------FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAK 647
++S+ +N L + L I+N + L+++ K
Sbjct: 227 RGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMK 263
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 461 RLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN--------------LSWERRLRITAE 505
LLG C + PL+V EF G L ++ K N L+ E + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 506 TAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG-- 563
A + +L S IHRD+ + NILL E K+ DFG ++ + D V +G
Sbjct: 157 VAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIXKDP---DXVRKGDA 210
Query: 564 --TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
L ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 32/235 (13%)
Query: 434 KFVDQAKID-----EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHI 488
K +D+ +++ + E+ ++ +N N+V+L + LV E+ G +F+++
Sbjct: 46 KIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 105
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
G + + + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 106 VAHGRMKEKEARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSN 162
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMALLSDKPE 607
+ G+ Y PE Q K + DV+S GV+L L++G + +
Sbjct: 163 EFTVG--NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
Query: 608 EERSLAMN-------FLSS--------------LKQNRLLEILDNRIVNDGNKQQ 641
E R + ++S+ +K+ L +I+ +R +N G++++
Sbjct: 221 ELRERVLRGKYRIPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEE 275
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 413 GSGNV-YKGFLPDRTPVAVKKSKFVDQA-KIDEFIN-ELVVVLQINRRNVVRLLGCCLET 469
GSGN + D+ + K++++ KIDE + E++ + N+VR L
Sbjct: 28 GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 470 QVPLLVYEFVGNGTLFEHIHKKGNLSW-ERRLRITAETAGVLSYLHSETNVPIIHRDVKS 528
+V E+ G LFE I G S E R +GV SY H+ + + HRD+K
Sbjct: 88 THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYCHA---MQVCHRDLKL 143
Query: 529 ANILLDENCTP--KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK-SDVY 585
N LLD + P K+ FG SK + + TV GT Y+ PE L + K +DV+
Sbjct: 144 ENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVW 201
Query: 586 SFGVVLVELLTGKMALLSDKPEEERSL 612
S GV L +L G A + PEE ++
Sbjct: 202 SCGVTLYVMLVG--AYPFEDPEEPKNF 226
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 58/279 (20%)
Query: 426 TPVAVKKSKF-VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
T VAVK K +++ + ++E V+ Q+N +V++L G C + LL+ E+ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 485 -------------------------FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNV 519
+H ++ L+ + + + + YL +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA-LTMGDLISFAWQISQGMQYL---AEM 169
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
++HRD+ + NIL+ E K+SDFG S+ D + + V+ + G + +++ L
Sbjct: 170 SLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLF 225
Query: 580 D-----KSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILD--NR 632
D +SDV+SFGV+L E++T L N + RL +L +R
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIVT---------------LGGNPYPGIPPERLFNLLKTGHR 270
Query: 633 IVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
+ N + E+ +L +C ++RP ++S +L+
Sbjct: 271 MERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 16/220 (7%)
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
++ + + + E+ ++ +N N+V+L + LV E+ G +F+++ G +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
+ + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-- 166
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM 614
G+ Y PE Q K + DV+S GV+L L++G + +E R +
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 615 N-------FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAK 647
++S+ +N L + L I+N + L+++ K
Sbjct: 227 RGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMK 263
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 404 NYADVIGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINR 456
N +G G G V + F D+T VAVK K ++ ++EL +++ I
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 457 R-NVVRLLGCCLETQVPLLVY-EFVGNGTLFEHIHKKGN------------LSWERRLRI 502
NVV LLG C + PL+V EF G L ++ K N L+ E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 503 TAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ 562
+ + A + +L S IHRD+ + NILL E K+ DFG ++ D ++ V+
Sbjct: 150 SFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVR 202
Query: 563 G-----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
L ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 16/220 (7%)
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
++ + + + E+ ++ +N N+V+L + LV E+ G +F+++ G +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
+ + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-- 166
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM 614
G+ Y PE Q K + DV+S GV+L L++G + +E R +
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 615 N-------FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAK 647
++S+ +N L + L I+N + L+++ K
Sbjct: 227 RGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMK 263
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 58/279 (20%)
Query: 426 TPVAVKKSKF-VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
T VAVK K +++ + ++E V+ Q+N +V++L G C + LL+ E+ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 485 -------------------------FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNV 519
+H ++ L+ + + + + YL +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA-LTMGDLISFAWQISQGMQYL---AEM 169
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
++HRD+ + NIL+ E K+SDFG S+ D + + V+ + G + +++ L
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLF 225
Query: 580 D-----KSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILD--NR 632
D +SDV+SFGV+L E++T L N + RL +L +R
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIVT---------------LGGNPYPGIPPERLFNLLKTGHR 270
Query: 633 IVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
+ N + E+ +L +C ++RP ++S +L+
Sbjct: 271 MERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 24/224 (10%)
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
++ + + + E+ ++ +N N+V+L + LV E+ G +F+++ G +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV----P 551
+ + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMALLSDKPEEER 610
+DA C G Y PE Q K + DV+S GV+L L++G + +E R
Sbjct: 169 LDAF--C----GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 222
Query: 611 SLAMN-------FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAK 647
+ ++S+ +N L + L I+N + L+++ K
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMK 263
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 58/279 (20%)
Query: 426 TPVAVKKSKF-VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
T VAVK K +++ + ++E V+ Q+N +V++L G C + LL+ E+ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 485 -------------------------FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNV 519
+H ++ L+ + + + + YL +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA-LTMGDLISFAWQISQGMQYL---AEM 169
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
++HRD+ + NIL+ E K+SDFG S+ D + + V+ + G + +++ L
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSYVKRSQGRIPVKWMAIESLF 225
Query: 580 D-----KSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILD--NR 632
D +SDV+SFGV+L E++T L N + RL +L +R
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIVT---------------LGGNPYPGIPPERLFNLLKTGHR 270
Query: 633 IVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQ 671
+ N + E+ +L +C ++RP ++S +L+
Sbjct: 271 MERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
+ K K V++ ++ EL ++ + +V L + + +V + + G L H+
Sbjct: 48 MNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ 107
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
+ + E E L YL ++ IIHRD+K NILLDE+ ++DF + +
Sbjct: 108 QNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAM 164
Query: 550 VPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS---DVYSFGVVLVELLTGK 598
+P + T + GT Y+ PE + K S D +S GV ELL G+
Sbjct: 165 LPRET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 49/279 (17%)
Query: 407 DVIGCGGSGNVYKG-FLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGC 465
++IG GG G V+K D +K+ K+ ++ + E+ + +++ N+V GC
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVHYNGC 72
Query: 466 C----------------LETQVPLLVYEFVGNGTLFEHIHKKGNLSWER--RLRITAETA 507
+T+ + EF GTL + I K+ ++ L + +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 508 GVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGY 567
+ Y+HS+ +I+RD+K +NI L + K+ DFG + D + + +GTL Y
Sbjct: 133 KGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTLRY 187
Query: 568 LDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLE 627
+ PE + + + D+Y+ G++L ELL + D E F + L+ + +
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLH-----VCDTAFE----TSKFFTDLRDGIISD 238
Query: 628 ILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
I D K+ L + +S + E+RP E+
Sbjct: 239 IFD------------KKEKTLLQKLLSKKPEDRPNTSEI 265
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNVYKGFLPDRT---PVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y + IG G G V F D VAVKK F +Q ELV++
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAF--DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK 76
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + IH + L ER + +
Sbjct: 77 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME--LDHERMSYLLYQM 133
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + + VV T
Sbjct: 134 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVV--TRY 188
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ EL+ G +
Sbjct: 189 YRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILL 533
L+ E++ G LF + ++G + AE + L +LH + II+RD+K NI+L
Sbjct: 98 LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIML 154
Query: 534 DENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLGYLDPEYLQTCKLTDKSDVYSFGVV 590
+ K++DFG K ++I + TV GT+ Y+ PE L D +S G +
Sbjct: 155 NHQGHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGAL 210
Query: 591 LVELLTG 597
+ ++LTG
Sbjct: 211 MYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILL 533
L+ E++ G LF + ++G + AE + L +LH + II+RD+K NI+L
Sbjct: 98 LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIML 154
Query: 534 DENCTPKVSDFGASKLVPIDAIQNCTVVQ---GTLGYLDPEYLQTCKLTDKSDVYSFGVV 590
+ K++DFG K ++I + TV GT+ Y+ PE L D +S G +
Sbjct: 155 NHQGHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGAL 210
Query: 591 LVELLTG 597
+ ++LTG
Sbjct: 211 MYDMLTG 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
++ + + + E+ ++ +N N+V+L + LV E+ G +F+++ G
Sbjct: 45 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--- 101
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
W + A+ ++S + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 102 WMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-- 159
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM 614
G+ Y PE Q K + DV+S GV+L L++G + +E R +
Sbjct: 160 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 219
Query: 615 N-------FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAK 647
++S+ +N L + L I+N + L+++ K
Sbjct: 220 RGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMK 256
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ ++N +N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKLNHQNIV 111
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 521 ----------IIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 221
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 266
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 267 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 305
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVK--KSKFVDQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK + +Q ++D F+ E +++ + N +N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD-FLMEALIISKFNHQNIV 111
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 521 ----------IIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 221
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 266
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 267 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 305
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 413 GSGNV-YKGFLPDRTPVAVKKSKFVDQA-KIDEFIN-ELVVVLQINRRNVVRLLGCCLET 469
GSGN + D+ + K++++ KIDE + E++ + N+VR L
Sbjct: 28 GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 470 QVPLLVYEFVGNGTLFEHIHKKGNLSW-ERRLRITAETAGVLSYLHSETNVPIIHRDVKS 528
+V E+ G LFE I G S E R +GV SY H+ + + HRD+K
Sbjct: 88 THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYCHA---MQVCHRDLKL 143
Query: 529 ANILLDENCTP--KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK-SDVY 585
N LLD + P K+ FG SK + + TV GT Y+ PE L + K +DV+
Sbjct: 144 ENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPAYIAPEVLLKKEYDGKVADVW 201
Query: 586 SFGVVLVELLTGKMALLSDKPEEERSL 612
S GV L +L G A + PEE ++
Sbjct: 202 SCGVTLYVMLVG--AYPFEDPEEPKNF 226
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 385 QSSEKAKIFTEEEIKTVTNNYADV--IGCGGSGNVYKGF-LPDRTPVAVKKSK-FVDQAK 440
+SS K KI E+ + D+ IG G G+V K P +AVK+ + VD+ +
Sbjct: 4 ESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE 63
Query: 441 IDEFINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK------KGN 493
+ + +L VV++ + +V+ G + E + T F+ +K
Sbjct: 64 QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS--TSFDKFYKYVYSVLDDV 121
Query: 494 LSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPID 553
+ E +IT T L++L + N+ IIHRD+K +NILLD + K+ DFG S + +D
Sbjct: 122 IPEEILGKITLATVKALNHL--KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL-VD 178
Query: 554 AIQNCTVVQGTLGYLDPEYLQTCKLTD----KSDVYSFGVVLVELLTGK 598
+I T G Y+ PE + +SDV+S G+ L EL TG+
Sbjct: 179 SIAK-TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 401 VTNNYADV--IGCGGSGNVY----KGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
+++ Y V +G G G V K +R +KKS + ++E+ V+ Q+
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 455 NRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLH 514
+ N+++L + + LV E G LF+ I + S I + +YLH
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 515 SETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE 571
I+HRD+K N+LL+ + K+ DFG S + + GT Y+ PE
Sbjct: 139 KHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPE 193
Query: 572 YLQTCKLTDKSDVYSFGVVLVELLTG 597
L+ K +K DV+S GV+L LL G
Sbjct: 194 VLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 455 NRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWER--RLRITAETAGVLSY 512
N +N R CL Q+ EF GTL + I K+ ++ L + + + Y
Sbjct: 97 NSKNSSRSKTKCLFIQM-----EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDY 151
Query: 513 LHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEY 572
+HS+ +IHRD+K +NI L + K+ DFG + D + T +GTL Y+ PE
Sbjct: 152 IHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--TRSKGTLRYMSPEQ 206
Query: 573 LQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNR 632
+ + + D+Y+ G++L ELL + D E F + L+ + +I D
Sbjct: 207 ISSQDYGKEVDLYALGLILAELLH-----VCDTAFE----TSKFFTDLRDGIISDIFD-- 255
Query: 633 IVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
K+ L + +S + E+RP E+
Sbjct: 256 ----------KKEKTLLQKLLSKKPEDRPNTSEI 279
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 16/220 (7%)
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
++ + + + E+ ++ +N N+V+L + LV E+ G +F+++ G +
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI 555
+ + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-- 166
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAM 614
G+ Y PE Q K + DV+S GV+L L++G + +E R +
Sbjct: 167 NKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 615 N-------FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAK 647
++S+ +N L + L I+N + L+++ K
Sbjct: 227 RGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMK 263
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 54/280 (19%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ ++N +N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKLNHQNIV 97
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETA-GVLSYLHSETNV 519
R +G L++ ++ E + G L + E R R + ++ +L LH ++
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 150
Query: 520 P----------IIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG--- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCA 206
Query: 564 --TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLK 621
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKS 251
Query: 622 QNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 252 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 128/306 (41%), Gaps = 50/306 (16%)
Query: 404 NYADVIGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINR 456
N +G G G V + F D+T VAVK K ++ ++EL +++ I
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 457 R-NVVRLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN---------------LSWERR 499
NVV LLG C + PL+V EF G L ++ K N L+ E
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 500 LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCT 559
+ + + A + +L S IHRD+ + NILL E K+ DFG ++ + D
Sbjct: 151 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD---X 204
Query: 560 VVQG----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
V +G L ++ PE + T +SDV+SFGV+L E+ + L P +
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----LGASPYPGVKIDEE 259
Query: 616 FLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLS 675
F LK+ + D E+ + C +RPT E+ +E G L
Sbjct: 260 FCRRLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSEL-VEHLGNL- 308
Query: 676 LMSNGQ 681
L +N Q
Sbjct: 309 LQANAQ 314
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 111
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 521 ----------IIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 221
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 266
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 267 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 305
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 409 IGCGGSGNVY----KGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLG 464
+G G G V K +R +KKS + ++E+ V+ Q++ N+++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
+ + LV E G LF+ I + S I + +YLH I+HR
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHR 128
Query: 525 DVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
D+K N+LL+ + K+ DFG S + + GT Y+ PE L+ K +K
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLRK-KYDEK 185
Query: 582 SDVYSFGVVLVELLTG 597
DV+S GV+L LL G
Sbjct: 186 CDVWSCGVILYILLCG 201
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 404 NYADVIG-CGGSGNVYKGFLPDRTPVAVKKSKFVD---QAKIDEFINELVVVLQINRRNV 459
++ ++IG G G VYK ++ + +K +D + ++++++ E+ ++ + N+
Sbjct: 12 DFWEIIGELGDFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 460 VRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT-AETAGVLSYLHSETN 518
V+LL ++ EF G + + + E ++++ +T L+YLH
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK- 128
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
IIHRD+K+ NIL + K++DFG S IQ GT ++ PE +
Sbjct: 129 --IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 579 TD-----KSDVYSFGVVLVEL 594
D K+DV+S G+ L+E+
Sbjct: 187 KDRPYDYKADVWSLGITLIEM 207
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E + LF+ I ++G L E + + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 131
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 188
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 227
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 228 --RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 257
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSW-ERRLRITAE 505
E++ + N+VR L +V E+ G LFE I G S E R
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 506 TAGVLSYLHSETNVPIIHRDVKSANILLDENCTP--KVSDFGASKLVPIDAIQNCTVVQG 563
+GV SY H+ + + HRD+K N LLD + P K+ DFG SK + + TV G
Sbjct: 125 ISGV-SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--G 178
Query: 564 TLGYLDPEYLQTCKLTDK-SDVYSFGVVLVELLTGKMALLSDKPEEERSL 612
T Y+ PE L + K +DV+S GV L +L G A + PEE ++
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG--AYPFEDPEEPKNF 226
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 54/280 (19%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 103
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETA-GVLSYLHSETNV 519
R +G L++ ++ E + G L + E R R + ++ +L LH ++
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 156
Query: 520 P----------IIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG--- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 157 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCA 212
Query: 564 --TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLK 621
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 213 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKS 257
Query: 622 QNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 258 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 297
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 88
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 521 ----------IIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 143 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 198
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 199 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 243
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 244 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 282
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 97
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 521 ----------IIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 207
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 252
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 253 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 96
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 521 ----------IIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 206
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 251
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 252 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 290
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 96
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 521 ----------IIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 206
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 251
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 252 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 290
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTP------VAVKKSKFVDQAKI-DEFINEL 448
+EI + + +G G VYKG L P VA+K K + + +EF +E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 449 VVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHI-----HK-----------KG 492
++ ++ NVV LLG + Q +++ + +G L E + H K
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 493 NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV-P 551
L + + A+ A + YL S ++H+D+ + N+L+ + K+SD G + V
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
D + + ++ PE + K + SD++S+GVVL E+ +
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTP------VAVKKSKFVDQAKI-DEFINEL 448
+EI + + +G G VYKG L P VA+K K + + +EF +E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 449 VVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHI-----HK-----------KG 492
++ ++ NVV LLG + Q +++ + +G L E + H K
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 493 NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV-P 551
L + + A+ A + YL S ++H+D+ + N+L+ + K+SD G + V
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
D + + ++ PE + K + SD++S+GVVL E+ +
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 137
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 521 ----------IIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 192 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAM 247
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 292
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 293 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 331
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 44/275 (16%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 97
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 521 ----------IIHRDVKSANILLD---ENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLG 566
IHRD+ + N LL K+ DFG A + + +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLL 626
++ PE T K+D +SFGV+L E+ SL S +L
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSNQEVL 256
Query: 627 EILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
E + + D K V ++ +C + E+RP
Sbjct: 257 EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANIL 532
+V E+V G LF++I K G L + R+ + + Y H ++HRD+K N+L
Sbjct: 92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVL 148
Query: 533 LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ-TCKLTDKSDVYSFGVVL 591
LD + K++DFG S ++ + G+ Y PE + + D++S GV+L
Sbjct: 149 LDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAAPEVISGRLYAGPEVDIWSSGVIL 206
Query: 592 VELLTGKMALLSD 604
LL G + D
Sbjct: 207 YALLCGTLPFDDD 219
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 113
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 521 ----------IIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 168 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 223
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 224 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 268
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 269 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 307
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 177
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 177
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 132
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 189
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 228
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 229 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 123
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
R +G L++ ++ E + G L K L R + +L LH ++
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDL------KSFLRETRPRPSQPSSLAMLDLLHVARDIA 177
Query: 521 ----------IIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG---- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 178 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 233
Query: 564 -TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQ 622
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 234 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKSN 278
Query: 623 NRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 279 QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 317
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 54/280 (19%)
Query: 409 IGCGGSGNVYKGFL------PDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVV 460
+G G G VY+G + P VAVK V +Q ++D F+ E +++ + N +N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 114
Query: 461 RLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETA-GVLSYLHSETNV 519
R +G L++ ++ E + G L + E R R + ++ +L LH ++
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 167
Query: 520 P----------IIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQG--- 563
IHRD+ + N LL K+ DFG ++ D + +G
Sbjct: 168 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCA 223
Query: 564 --TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLK 621
+ ++ PE T K+D +SFGV+L E+ SL S
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMPYPSKS 268
Query: 622 QNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERP 661
+LE + + D K V ++ +C + E+RP
Sbjct: 269 NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 308
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 147
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 204
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 243
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 244 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 127
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 184
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIGGQVFF 223
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 224 --RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 253
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 174
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 231
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 270
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 271 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 146
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 203
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 242
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 243 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 461 RLLGCCLETQVPLLVY-EFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ + D V +G
Sbjct: 146 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD---XVRKG 199
Query: 564 ----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
L ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 43/290 (14%)
Query: 391 KIFTEEEIKTVTNNY--ADVIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID-- 442
K+ +E + + + Y ++G GG G+VY G + D PVA+K K + D ++
Sbjct: 31 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 90
Query: 443 -EFINELVVVLQINR--RNVVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWER 498
E+V++ +++ V+RLL +L+ E LF+ I ++G L E
Sbjct: 91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 150
Query: 499 RLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQN 557
+ + + H N ++HRD+K NIL+D N K+ DFG+ L+ D +
Sbjct: 151 ARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY- 205
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
T GT Y PE+++ + +S V+S G++L +++ G + D+
Sbjct: 206 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------- 253
Query: 617 LSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
EI+ ++ ++ E L C+++R +RPT +E+
Sbjct: 254 ----------EIIRGQVFF--RQRVSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 9/225 (4%)
Query: 404 NYADVIGCGGSGNVYKG-FLPDRTPVAVK---KSKFVDQAKIDEFINELVVVLQINRRNV 459
++ VIG G G V + AVK K + + + ++E V+L+ +
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 460 VRLLGCCLETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETN 518
+ L +T L V +++ G LF H+ ++ R AE A L YLHS
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS--- 157
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
+ I++RD+K NILLD ++DFG K I+ + GT YL PE L
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 579 TDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQN 623
D + G VL E+L G S E +N LK N
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN 261
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 461 RLLGCCLETQVPLLVY-EFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ D ++ V+
Sbjct: 146 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRK 198
Query: 564 -----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
L ++ PE + T +SDV+SFGV+L E+ + L P + F
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----LGASPYPGVKIDEEFCR 253
Query: 619 SLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMS 678
LK+ + D E+ + C +RPT E+ +E G L L +
Sbjct: 254 RLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSEL-VEHLGNL-LQA 302
Query: 679 NGQ 681
N Q
Sbjct: 303 NAQ 305
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 127
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 184
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 223
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 224 --RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 253
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 147
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 204
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 243
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 244 --RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 273
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 127
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 128 NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 184
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 223
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 224 --RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 253
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 115/278 (41%), Gaps = 59/278 (21%)
Query: 428 VAVKKSKFVDQAKIDE-FINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLF 485
VAVK K A E ++EL ++ + + N+V LLG C L++ E+ G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 486 EHIHKKGN-----------------------LSWERRLRITAETAGVLSYLHSETNVPII 522
+ +K L L +++ A +++L S+ I
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CI 180
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGT----LGYLDPEYLQTCKL 578
HRDV + N+LL K+ DFG ++ + D+ +V+G + ++ PE + C
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDS---NYIVKGNARLPVKWMAPESIFDCVY 237
Query: 579 TDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
T +SDV+S+G++L E+ SL +N + N ++V DG
Sbjct: 238 TVQSDVWSYGILLWEIF---------------SLGLNPYPGILVNSKF----YKLVKDGY 278
Query: 639 KQQL-----KEVAKLAARCISVRGEERPTMKEVSLELQ 671
+ K + + C ++ RPT +++ LQ
Sbjct: 279 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 160
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 217
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIGGQVFF 256
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 257 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 130
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 187
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 226
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 227 --RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 256
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 116
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 173
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 228
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 159
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 216
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIGGQVFF 255
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 256 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 461 RLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ + D V +G
Sbjct: 146 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD---XVRKG 199
Query: 564 ----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
L ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 146
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 203
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 242
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 243 --RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 272
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 132
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 189
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 228
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 229 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 400 TVTNNYADV--IGCGGSGNVYKGFLPDRT---PVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y + IG G G V F D VAVKK F +Q ELV++
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAF--DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + IH + L ER + +
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
Y PE + D++S G ++ EL+ G
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 444 FINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG-NLSWERRLRI 502
F E ++ N VV+L + + +V E++ G L + W R
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-- 173
Query: 503 TAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ 562
TAE L +HS + IHRDVK N+LLD++ K++DFG + + + C
Sbjct: 174 TAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 563 GTLGYLDPEYLQT----CKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
GT Y+ PE L++ + D +S GV L E+L G +D S MN +
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 290
Query: 619 SL 620
SL
Sbjct: 291 SL 292
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 131
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 188
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 227
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 228 --RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 257
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 159
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 216
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIGGQVFF 255
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 256 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 147
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 204
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 243
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 244 --RQRVSXECQHLIRWCLALRPXDRPTFEEIQ 273
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 160
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 217
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIGGQVFF 256
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 257 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 132
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 189
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 228
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 229 --RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 258
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 444 FINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG-NLSWERRLRI 502
F E ++ N VV+L + + +V E++ G L + W R
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-- 178
Query: 503 TAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ 562
TAE L +HS + IHRDVK N+LLD++ K++DFG + + + C
Sbjct: 179 TAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 563 GTLGYLDPEYLQT----CKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
GT Y+ PE L++ + D +S GV L E+L G +D S MN +
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 295
Query: 619 SL 620
SL
Sbjct: 296 SL 297
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 461 RLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ + D V +G
Sbjct: 155 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD---XVRKG 208
Query: 564 ----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
L ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 160
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 217
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIGGQVFF 256
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 257 --RQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 154
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 211
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 250
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 251 --RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 280
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 444 FINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG-NLSWERRLRI 502
F E ++ N VV+L + + +V E++ G L + W R
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-- 178
Query: 503 TAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ 562
TAE L +HS + IHRDVK N+LLD++ K++DFG + + + C
Sbjct: 179 TAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 563 GTLGYLDPEYLQT----CKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
GT Y+ PE L++ + D +S GV L E+L G +D S MN +
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 295
Query: 619 SL 620
SL
Sbjct: 296 SL 297
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 160
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 217
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIGGQVFF 256
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 257 --RQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 159
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 216
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIGGQVFF 255
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 256 --RQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 436 VDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLS 495
++ + + + E+ + +N N+V+L + LV E+ G +F+++ G
Sbjct: 52 LNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK 111
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV----P 551
+ + + Y H + I+HRD+K+ N+LLD + K++DFG S
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK 168
Query: 552 IDAIQNCTVVQGTLGYLDPEYLQTCKLT-DKSDVYSFGVVLVELLTGKMAL 601
+DA C G Y PE Q K + DV+S GV+L L++G +
Sbjct: 169 LDAF--C----GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 461 RLLGCCLETQVPLLVY-EFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ D ++ V+
Sbjct: 146 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRK 198
Query: 564 -----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
L ++ PE + T +SDV+SFGV+L E+ + L P + F
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----LGASPYPGVKIDEEFCR 253
Query: 619 SLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMS 678
LK+ + D E+ + C +RPT E+ +E G L L +
Sbjct: 254 RLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSEL-VEHLGNL-LQA 302
Query: 679 NGQ 681
N Q
Sbjct: 303 NAQ 305
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E+ ++ +I NV+ L +L+ E V G LF+ + +K +L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPK----VSDFGASKLVPIDAIQNCTVVQ 562
+ YLHS + I H D+K NI+L + PK + DFG + ID +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIF 178
Query: 563 GTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 159
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY--TDFDGTRVYSPPEWIRYH 216
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 255
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ E L C+++R +RPT +E+
Sbjct: 256 --RQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 461 RLLGCCLETQVPLLVY-EFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ D ++ V+
Sbjct: 157 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRK 209
Query: 564 -----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
L ++ PE + T +SDV+SFGV+L E+ + L P + F
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----LGASPYPGVKIDEEFCR 264
Query: 619 SLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMS 678
LK+ + D E+ + C +RPT E+ +E G L L +
Sbjct: 265 RLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSEL-VEHLGNL-LQA 313
Query: 679 NGQ 681
N Q
Sbjct: 314 NAQ 316
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 461 RLLGCCLETQVPLLVY-EFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ D ++ V+
Sbjct: 155 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRK 207
Query: 564 -----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
L ++ PE + T +SDV+SFGV+L E+ + L P + F
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----LGASPYPGVKIDEEFCR 262
Query: 619 SLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMS 678
LK+ + D E+ + C +RPT E+ +E G L L +
Sbjct: 263 RLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSEL-VEHLGNL-LQA 311
Query: 679 NGQ 681
N Q
Sbjct: 312 NAQ 314
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 409 IGCGGSGNVYK-GFLPDRTPVAVKKSKFV-DQAKIDEFINELVVVLQINR-RNVVRLLGC 465
+G G G V+K F +AVK+ + ++ + + +L VVL+ + +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 466 CLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRL--RITAETAGVLSYLHSETNVPIIH 523
+ + E +G T E + K+ R+ ++T L YL + V IH
Sbjct: 93 FITNTDVFIAMELMG--TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV--IH 148
Query: 524 RDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTD--- 580
RDVK +NILLDE K+ DFG S + D ++ + G Y+ PE + T
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTKPDY 206
Query: 581 --KSDVYSFGVVLVELLTGK 598
++DV+S G+ LVEL TG+
Sbjct: 207 DIRADVWSLGISLVELATGQ 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 116
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 173
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 228
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+E E+ ++ Q+ NV+ L +L+ E V G LF+ + +K +LS E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQN 557
+ ++YLH++ I H D+K NI+L + P K+ DFG + + D ++
Sbjct: 120 FIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF 175
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+ GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 176 KNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 461 RLLGCCLETQVPLLVY-EFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ D ++ V+
Sbjct: 155 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDXVRK 207
Query: 564 -----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLS 618
L ++ PE + T +SDV+SFGV+L E+ + L P + F
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----LGASPYPGVKIDEEFCR 262
Query: 619 SLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQGRLSLMS 678
LK+ + D E+ + C +RPT E+ +E G L L +
Sbjct: 263 RLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSEL-VEHLGNL-LQA 311
Query: 679 NGQ 681
N Q
Sbjct: 312 NAQ 314
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+E E+ ++ Q+ NV+ L +L+ E V G LF+ + +K +LS E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQN 557
+ ++YLH++ I H D+K NI+L + P K+ DFG + + D ++
Sbjct: 120 FIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF 175
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+ GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 176 KNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVD---QAKIDEFINELVVVLQINRRNVVRLLGC 465
+G G G VYK ++ + +K +D + ++++++ E+ ++ + N+V+LL
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 466 CLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT-AETAGVLSYLHSETNVPIIHR 524
++ EF G + + + E ++++ +T L+YLH IIHR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHR 159
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTD---- 580
D+K+ NIL + K++DFG S IQ GT ++ PE + D
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 581 -KSDVYSFGVVLVEL 594
K+DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E + ++ N+VRL E LV++ V G LFE I + S +
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 137
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
++Y HS I+HR++K N+LL + K++DFG + + ++ + G
Sbjct: 138 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAG 192
Query: 564 TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
T GYL PE L+ + D+++ GV+L LL G
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+E E+ ++ Q+ NV+ L +L+ E V G LF+ + +K +LS E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQN 557
+ ++YLH++ I H D+K NI+L + P K+ DFG + + D ++
Sbjct: 120 FIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF 175
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+ GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 176 KNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 461 RLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN----------------LSWERRLRIT 503
LLG C + PL+V EF G L ++ K N L+ E + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ A + +L S IHRD+ + NILL E K+ DFG ++ D ++ V+
Sbjct: 192 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRK 244
Query: 564 -----TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
L ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+E E+ ++ Q+ NV+ L +L+ E V G LF+ + +K +LS E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQN 557
+ ++YLH++ I H D+K NI+L + P K+ DFG + + D ++
Sbjct: 120 FIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF 175
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+ GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 176 KNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RN 458
++G GG G+VY G + D PVA+K K + D ++ E+V++ +++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 459 VVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
V+RLL +L+ E LF+ I ++G L E + + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 174
Query: 518 NVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
N ++HRD+K NIL+D N K+ DFG+ L+ D + T GT Y PE+++
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYH 231
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVN 635
+ +S V+S G++L +++ G + D+ EI+ ++
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------------------EIIRGQVFF 270
Query: 636 DGNKQQLKEVAKLAARCISVRGEERPTMKEVS 667
++ E L C+++R +RPT +E+
Sbjct: 271 --RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 300
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 34/245 (13%)
Query: 434 KFVDQAKIDEFINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG 492
K +D++K D E+ ++L+ + N++ L + + LV E + G L + I ++
Sbjct: 58 KVIDKSKRDPS-EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK 116
Query: 493 NLSWERRLRITAETAG-VLSYLHSETNVPIIHRDVKSANIL-LDENCTP---KVSDFGAS 547
S ER T G + YLHS+ ++HRD+K +NIL +DE+ P ++ DFG +
Sbjct: 117 FFS-EREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 548 KLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL--- 602
K + +N ++ T ++ PE L+ + D++S G++L +L G
Sbjct: 173 KQL---RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAK-LAARCISVRGEERP 661
SD PEE L+ + + ++ GN + E AK L ++ + V +R
Sbjct: 230 SDTPEE-------ILTRIGSGKF-------TLSGGNWNTVSETAKDLVSKMLHVDPHQRL 275
Query: 662 TMKEV 666
T K+V
Sbjct: 276 TAKQV 280
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 29/258 (11%)
Query: 403 NNYADV--IGCGGSGNVYKGFLPD-RTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNV 459
+ Y D+ +GCGG+G V+ D VA+KK D + + E+ ++ +++ N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 460 VRL--------------LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAE 505
V++ +G E +V E++ T ++ ++G L E +
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM--ETDLANVLEQGPLLEEHARLFMYQ 128
Query: 506 TAGVLSYLHSETNVPIIHRDVKSANILLD-ENCTPKVSDFGASKLVPIDAIQNCTVVQG- 563
L Y+HS ++HRD+K AN+ ++ E+ K+ DFG ++++ + +G
Sbjct: 129 LLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 564 -TLGYLDPEYLQTC-KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLK 621
T Y P L + T D+++ G + E+LTGK E+ L + + +
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245
Query: 622 Q---NRLLEILDNRIVND 636
+ LL ++ I ND
Sbjct: 246 EEDRQELLSVIPVYIRND 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 43/290 (14%)
Query: 391 KIFTEEEIKTVTNNY--ADVIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKID-- 442
K+ +E + + + Y ++G GG G+VY G + D PVA+K K + D ++
Sbjct: 44 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 103
Query: 443 -EFINELVVVLQINR--RNVVRLLGCCLETQVPLLVYEFVGN-GTLFEHIHKKGNLSWER 498
E+V++ +++ V+RLL +L+ E LF+ I ++G L E
Sbjct: 104 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 163
Query: 499 RLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP-KVSDFGASKLVPIDAIQN 557
+ + + H N ++HRD+K NIL+D N K+ DFG+ L+ D +
Sbjct: 164 ARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVY- 218
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNF 616
T GT Y PE+++ + +S V+S G++L +++ G + D+
Sbjct: 219 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------- 266
Query: 617 LSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
EI+ ++ ++ E L C+++R +RPT +E+
Sbjct: 267 ----------EIIRGQVFF--RQRVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVD---QAKIDEFINELVVVLQINRRNVVRLLGC 465
+G G G VYK ++ + +K +D + ++++++ E+ ++ + N+V+LL
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 466 CLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT-AETAGVLSYLHSETNVPIIHR 524
++ EF G + + + E ++++ +T L+YLH IIHR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHR 159
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTD---- 580
D+K+ NIL + K++DFG S IQ GT ++ PE + D
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 581 -KSDVYSFGVVLVEL 594
K+DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+E E+ ++ Q+ NV+ L +L+ E V G LF+ + +K +LS E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQN 557
+ ++YLH++ I H D+K NI+L + P K+ DFG + + D ++
Sbjct: 120 FIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF 175
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+ GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 176 KNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E + ++ N+VRL E LV++ V G LFE I + S +
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
++Y HS I+HR++K N+LL + K++DFG + + ++ + G
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAG 169
Query: 564 TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
T GYL PE L+ + D+++ GV+L LL G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 136
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 191
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVD---QAKIDEFINELVVVLQINRRNVVRLLGC 465
+G G G VYK ++ + +K +D + ++++++ E+ ++ + N+V+LL
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 466 CLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT-AETAGVLSYLHSETNVPIIHR 524
++ EF G + + + E ++++ +T L+YLH IIHR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHR 159
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTD---- 580
D+K+ NIL + K++DFG S IQ GT ++ PE + D
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 581 -KSDVYSFGVVLVEL 594
K+DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 129
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 184
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 77
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 134
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 135 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 189
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 136
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 191
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 129
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 184
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+ + E+ ++ Q++ N+++L + LV E G LF+ I + S R
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 136
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNC 558
I + ++Y+H I+HRD+K N+LL+ ++ ++ DFG S +A +
Sbjct: 137 IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKM 191
Query: 559 TVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
GT Y+ PE L +K DV+S GV+L LL+G
Sbjct: 192 KDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 229
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 71
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 128
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 129 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 183
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E + ++ N+VRL E LV++ V G LFE I + S +
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 113
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
++Y HS I+HR++K N+LL + K++DFG + + ++ + G
Sbjct: 114 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAG 168
Query: 564 TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
T GYL PE L+ + D+++ GV+L LL G
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 400 TVTNNYADV--IGCGGSGNVYKGF--LPDRTPVAVKK--SKFVDQAKIDEFINELVVVLQ 453
TV Y ++ IG G G V + + +R VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVVAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 454 INRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETA 507
+N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMSYLLYQML 136
Query: 508 GVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGY 567
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRYY 191
Query: 568 LDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE + + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
E + ++ N+VRL E LV++ V G LFE I + S +
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 114
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
++Y HS I+HR++K N+LL + K++DFG + + ++ + G
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAG 169
Query: 564 TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
T GYL PE L+ + D+++ GV+L LL G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
Query: 438 QAKIDEFINELVVVLQINRRNVVRLLGCCLE-TQVPL-LVYEFVGNGTLFEHIHK----K 491
+A+ ++E+ ++ ++ N+VR ++ T L +V E+ G L I K +
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 492 GNLSWERRLRITAETAGVLSYLH--SETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
L E LR+ + L H S+ ++HRD+K AN+ LD K+ DFG +++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 550 VPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVEL 594
+ D T V GT Y+ PE + +KSD++S G +L EL
Sbjct: 166 LNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 34/245 (13%)
Query: 434 KFVDQAKIDEFINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG 492
K +D++K D E+ ++L+ + N++ L + + LV E + G L + I ++
Sbjct: 58 KVIDKSKRDPS-EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK 116
Query: 493 NLSWERRLRITAETAG-VLSYLHSETNVPIIHRDVKSANIL-LDENCTP---KVSDFGAS 547
S ER T G + YLHS+ ++HRD+K +NIL +DE+ P ++ DFG +
Sbjct: 117 FFS-EREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 548 KLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALL--- 602
K + +N ++ T ++ PE L+ + D++S G++L +L G
Sbjct: 173 KQL---RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
Query: 603 SDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAK-LAARCISVRGEERP 661
SD PEE L+ + + ++ GN + E AK L ++ + V +R
Sbjct: 230 SDTPEE-------ILTRIGSGKF-------TLSGGNWNTVSETAKDLVSKMLHVDPHQRL 275
Query: 662 TMKEV 666
T K+V
Sbjct: 276 TAKQV 280
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
+ K + + + + E+ ++ Q++ N+++L + LV E G LF+ I
Sbjct: 83 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 142
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGA 546
+ S RI + ++Y+H I+HRD+K N+LL+ ++ ++ DFG
Sbjct: 143 SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL 199
Query: 547 SKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
S +A + GT Y+ PE L +K DV+S GV+L LL+G
Sbjct: 200 S--THFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
+ K + + + + E+ ++ Q++ N+++L + LV E G LF+ I
Sbjct: 82 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 141
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGA 546
+ S RI + ++Y+H I+HRD+K N+LL+ ++ ++ DFG
Sbjct: 142 SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL 198
Query: 547 SKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
S +A + GT Y+ PE L +K DV+S GV+L LL+G
Sbjct: 199 S--THFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 246
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+ + E+ ++ Q++ N+++L + LV E G LF+ I + S R
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNC 558
I + ++Y+H I+HRD+K N+LL+ ++ ++ DFG S +A +
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKM 185
Query: 559 TVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
GT Y+ PE L +K DV+S GV+L LL+G
Sbjct: 186 KDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 14/182 (7%)
Query: 425 RTPVAVKKSKFVDQAKI-----DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFV 479
+TP +K ++ K+ + E + + N+VRL E LV++ V
Sbjct: 53 KTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 112
Query: 480 GNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENC-- 537
G LFE I + S + ++++H I+HRD+K N+LL C
Sbjct: 113 TGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKG 169
Query: 538 -TPKVSDFGASKLVPIDAIQNCTV-VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELL 595
K++DFG + + + Q GT GYL PE L+ D+++ GV+L LL
Sbjct: 170 AAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILL 227
Query: 596 TG 597
G
Sbjct: 228 VG 229
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 404 NYADVIGCGGSGNVYK----GFLPDRTPVAVKKSKFVDQAKIDE---FINELVVVLQI-N 455
++ +G G G V + G + + V A + E ++EL V+ + N
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 456 RRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN------------------LSWE 497
N+V LLG C L++ E+ G L + +K + L E
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
L + + A +++L S+ IHRD+ + NILL K+ DFG ++ + D+
Sbjct: 169 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDS--- 222
Query: 558 CTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
VV+G + ++ PE + C T +SDV+S+G+ L EL + L P +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-----LGSSPYPGMPVD 277
Query: 614 MNFLSSLKQN-RLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQG 672
F +K+ R+L + E+ + C +RPT K++ ++
Sbjct: 278 SKFYKMIKEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
Query: 673 RLSLMSN 679
++S +N
Sbjct: 328 QISESTN 334
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L +R VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
Y PE + + D++S GV++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + ++ +VV G + +V E +L E H
Sbjct: 75 VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK 134
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + GV YLH N +IHRD+K N+ L+++ K+ DFG +
Sbjct: 135 RRKAVTEPEARYFMRQTIQGV-QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT 190
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
+ D + T+ GT Y+ PE L + + D++S G +L LL GK
Sbjct: 191 KIEFDGERKKTLC-GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 409 IGCGGSGNVYKGFLPDRTP---VAVKKSKF-VDQAKIDEFINELVVVLQINRRNVVRLLG 464
+G G VYKG ++T VA+K+ K ++ I E+ ++ ++ N+VRL
Sbjct: 13 LGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKK--GNLSWERRLRITA----ETAGVLSYLHSETN 518
LV+EF+ N L +++ + GN L + + L++ H
Sbjct: 71 VIHTENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK- 128
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTC 576
I+HRD+K N+L+++ K+ DFG ++ +P++ + V TL Y P+ L
Sbjct: 129 --ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV---TLWYRAPDVLMGS 183
Query: 577 KLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSS 619
+ S D++S G +L E++TGK EE+ L + + +
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGT 227
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 404 NYADVIGCGGSGNVYK----GFLPDRTPVAVKKSKFVDQAKIDE---FINELVVVLQI-N 455
++ +G G G V + G + + V A + E ++EL V+ + N
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 456 RRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN------------------LSWE 497
N+V LLG C L++ E+ G L + +K + L E
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
L + + A +++L S+ IHRD+ + NILL K+ DFG ++ + D+
Sbjct: 146 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS--- 199
Query: 558 CTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
VV+G + ++ PE + C T +SDV+S+G+ L EL + L P +
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-----LGSSPYPGMPVD 254
Query: 614 MNFLSSLKQN-RLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQG 672
F +K+ R+L + E+ + C +RPT K++ ++
Sbjct: 255 SKFYKMIKEGFRMLS----------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
Query: 673 RLSLMSN 679
++S +N
Sbjct: 305 QISESTN 311
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANIL 532
+V E+V G LF++I K G + R+ + + Y H ++HRD+K N+L
Sbjct: 87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVL 143
Query: 533 LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ-TCKLTDKSDVYSFGVVL 591
LD + K++DFG S ++ + G+ Y PE + + D++S GV+L
Sbjct: 144 LDAHMNAKIADFGLSNMMSDGEFLRTSC--GSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201
Query: 592 VELLTGKMAL 601
LL G +
Sbjct: 202 YALLCGTLPF 211
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 404 NYADVIGCGGSGNVYK----GFLPDRTPVAVKKSKFVDQAKIDE---FINELVVVLQI-N 455
++ +G G G V + G + + V A + E ++EL V+ + N
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 456 RRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN------------------LSWE 497
N+V LLG C L++ E+ G L + +K + L E
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
L + + A +++L S+ IHRD+ + NILL K+ DFG ++ + D+
Sbjct: 169 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS--- 222
Query: 558 CTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
VV+G + ++ PE + C T +SDV+S+G+ L EL + L P +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-----LGSSPYPGMPVD 277
Query: 614 MNFLSSLKQN-RLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQG 672
F +K+ R+L + E+ + C +RPT K++ ++
Sbjct: 278 SKFYKMIKEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
Query: 673 RLSLMSN 679
++S +N
Sbjct: 328 QISESTN 334
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 21/201 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVD----QAKIDEFINELVVVLQINRRNVVRLLG 464
+G G G+V+ + +R+ + K ++ Q +++ E+ V+ ++ N++++
Sbjct: 30 LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 465 CCLETQVPLLVYEFVGNGTLFEHI---HKKGN-LSWERRLRITAETAGVLSYLHSETNVP 520
+ +V E G L E I +G LS + + L+Y HS+
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--- 144
Query: 521 IIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC 576
++H+D+K NIL ++ +P K+ DFG ++L D ++ T GT Y+ PE +
Sbjct: 145 VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPEVFKR- 200
Query: 577 KLTDKSDVYSFGVVLVELLTG 597
+T K D++S GVV+ LLTG
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTG 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 438 QAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH-----IHKKG 492
++K D+F NEL ++ I + G ++YE++ N ++ + + K
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 493 NLSWERRLRITAETAGVL---SYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
+ I VL SY+H+E N I HRDVK +NIL+D+N K+SDFG S+
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 550 VPIDAIQNCTVVQGTLGYLDPEYL--QTCKLTDKSDVYSFGVVL 591
+ I+ +GT ++ PE+ ++ K D++S G+ L
Sbjct: 202 MVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+E E+ ++ Q+ N++ L +L+ E V G LF+ + +K +LS E
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQN 557
+ ++YLH++ I H D+K NI+L + P K+ DFG + + D ++
Sbjct: 120 FIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF 175
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+ GT ++ PE + L ++D++S GV+ LL+G L D +E
Sbjct: 176 KNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L +R VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
Y PE + + D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 404 NYADVIGCGGSGNVYK----GFLPDRTPVAVKKSKFVDQAKIDE---FINELVVVLQI-N 455
++ +G G G V + G + + V A + E ++EL V+ + N
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 456 RRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN------------------LSWE 497
N+V LLG C L++ E+ G L + +K + L E
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
L + + A +++L S+ IHRD+ + NILL K+ DFG ++ + D+
Sbjct: 164 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS--- 217
Query: 558 CTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
VV+G + ++ PE + C T +SDV+S+G+ L EL + L P +
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-----LGSSPYPGMPVD 272
Query: 614 MNFLSSLKQN-RLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQG 672
F +K+ R+L + E+ + C +RPT K++ ++
Sbjct: 273 SKFYKMIKEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
Query: 673 RLSLMSN 679
++S +N
Sbjct: 323 QISESTN 329
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 12/232 (5%)
Query: 397 EIKTVTNNYADVIGCGGSGNV----YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVL 452
++K + VIG G G V +K + K + + ++ F E ++
Sbjct: 71 QMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 453 QINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSY 512
N VV+L + + +V E++ G L ++ ++ + TAE L
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVLALDA 189
Query: 513 LHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEY 572
+HS + +IHRDVK N+LLD++ K++DFG + + +C GT Y+ PE
Sbjct: 190 IHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
Query: 573 LQT----CKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSL 620
L++ + D +S GV L E+L G +D S M+ +SL
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL 298
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L +R VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
Y PE + + D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 394 TEEEIKTVTNNYA--DVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVV 451
E I N+++ +IG GG G VY D + K +D+ +I E
Sbjct: 179 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC--LDKKRIKMKQGE---T 233
Query: 452 LQINRRNVVRLL--GCC---------LETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERR 499
L +N R ++ L+ G C T L + + + G L H+ + G S
Sbjct: 234 LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 293
Query: 500 LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGA----SKLVPIDAI 555
AE L ++H N +++RD+K ANILLDE+ ++SD G SK P ++
Sbjct: 294 RFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 350
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTG 597
GT GY+ PE LQ D S D +S G +L +LL G
Sbjct: 351 -------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 404 NYADVIGCGGSGNVYK----GFLPDRTPVAVKKSKFVDQAKIDE---FINELVVVLQI-N 455
++ +G G G V + G + + V A + E ++EL V+ + N
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 456 RRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN------------------LSWE 497
N+V LLG C L++ E+ G L + +K + L E
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
L + + A +++L S+ IHRD+ + NILL K+ DFG ++ + D+
Sbjct: 162 DLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS--- 215
Query: 558 CTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLA 613
VV+G + ++ PE + C T +SDV+S+G+ L EL + L P +
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-----LGSSPYPGMPVD 270
Query: 614 MNFLSSLKQN-RLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLELQG 672
F +K+ R+L + E+ + C +RPT K++ ++
Sbjct: 271 SKFYKMIKEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
Query: 673 RLSLMSN 679
++S +N
Sbjct: 321 QISESTN 327
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 394 TEEEIKTVTNNYA--DVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVV 451
E I N+++ +IG GG G VY D + K +D+ +I E
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC--LDKKRIKMKQGE---T 234
Query: 452 LQINRRNVVRLL--GCC---------LETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERR 499
L +N R ++ L+ G C T L + + + G L H+ + G S
Sbjct: 235 LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 294
Query: 500 LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGA----SKLVPIDAI 555
AE L ++H N +++RD+K ANILLDE+ ++SD G SK P ++
Sbjct: 295 RFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSL 612
GT GY+ PE LQ D S D +S G +L +LL G K +++ +
Sbjct: 352 -------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANIL 532
+V E+ G LF++I + LS E + + ++Y+HS+ HRD+K N+L
Sbjct: 84 FMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYA---HRDLKPENLL 140
Query: 533 LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ-TCKLTDKSDVYSFGVVL 591
DE K+ DFG + + G+L Y PE +Q L ++DV+S G++L
Sbjct: 141 FDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
Query: 592 VELLTGKMALLSD 604
L+ G + D
Sbjct: 201 YVLMCGFLPFDDD 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 454 INRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYL 513
+ N+VRL E LV++ V G LFE I + S + + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 514 HSETNVPIIHRDVKSANILLDENC---TPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDP 570
H + ++HRD+K N+LL C K++DFG + V D Q GT GYL P
Sbjct: 120 H---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSP 175
Query: 571 EYLQTCKLTDKSDVYSFGVVLVELLTG 597
E L+ D+++ GV+L LL G
Sbjct: 176 EVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
TV Y ++ IG G G V Y L + F +Q ELV++ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 455 NRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQMLC 138
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYR 193
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE + + D++S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 394 TEEEIKTVTNNYA--DVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVV 451
E I N+++ +IG GG G VY D + K +D+ +I E
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC--LDKKRIKMKQGE---T 234
Query: 452 LQINRRNVVRLL--GCC---------LETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERR 499
L +N R ++ L+ G C T L + + + G L H+ + G S
Sbjct: 235 LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 294
Query: 500 LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGA----SKLVPIDAI 555
AE L ++H N +++RD+K ANILLDE+ ++SD G SK P ++
Sbjct: 295 RFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSL 612
GT GY+ PE LQ D S D +S G +L +LL G K +++ +
Sbjct: 352 -------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 394 TEEEIKTVTNNYA--DVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVV 451
E I N+++ +IG GG G VY D + K +D+ +I E
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC--LDKKRIKMKQGE---T 234
Query: 452 LQINRRNVVRLL--GCC---------LETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERR 499
L +N R ++ L+ G C T L + + + G L H+ + G S
Sbjct: 235 LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 294
Query: 500 LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGA----SKLVPIDAI 555
AE L ++H N +++RD+K ANILLDE+ ++SD G SK P ++
Sbjct: 295 RFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 556 QNCTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTGKMALLSDKPEEERSL 612
GT GY+ PE LQ D S D +S G +L +LL G K +++ +
Sbjct: 352 -------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
TV Y ++ IG G G V Y L + F +Q ELV++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 455 NRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQMLC 137
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYR 192
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
TV Y ++ IG G G V Y L + F +Q ELV++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 455 NRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQMLC 137
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYR 192
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE + + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 413 GSGNVYKG-FLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQV 471
G+G Y F+ R + ++ V + +I+ +N ++ +I N++ L
Sbjct: 49 GTGKEYAAKFIKKRRLXSSRRG--VSREEIEREVN---ILREIRHPNIITLHDIFENKTD 103
Query: 472 PLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANI 531
+L+ E V G LF+ + +K +L+ + + + + YLHS+ I H D+K NI
Sbjct: 104 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENI 160
Query: 532 LLDENCTP----KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L + P K+ DFG + I+A + GT ++ PE + L ++D++S
Sbjct: 161 MLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 218
Query: 588 GVVLVELLTGKMALLSDKPEE 608
GV+ LL+G L + +E
Sbjct: 219 GVITYILLSGASPFLGETKQE 239
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANIL 532
+V E+V G LF++I K G + R+ + + Y H ++HRD+K N+L
Sbjct: 87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVL 143
Query: 533 LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ-TCKLTDKSDVYSFGVVL 591
LD + K++DFG S ++ + G+ Y PE + + D++S GV+L
Sbjct: 144 LDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201
Query: 592 VELLTGKMAL 601
LL G +
Sbjct: 202 YALLCGTLPF 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+E E+ ++ +I N++ L +L+ E V G LF+ + +K +L+ + +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQN 557
+ + YLHS+ I H D+K NI+L + P K+ DFG + I+A
Sbjct: 120 FLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNE 174
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+ GT ++ PE + L ++D++S GV+ LL+G L + +E
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 438 QAKIDEFINELVVVLQINRRNVVRLLGCCLE-TQVPL-LVYEFVGNGTLFEHIHK----K 491
+A+ ++E+ ++ ++ N+VR ++ T L +V E+ G L I K +
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 492 GNLSWERRLRITAETAGVLSYLH--SETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
L E LR+ + L H S+ ++HRD+K AN+ LD K+ DFG +++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 550 VPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVEL 594
+ D V GT Y+ PE + +KSD++S G +L EL
Sbjct: 166 LNHDTSFAKAFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+E E+ ++ +I N++ L +L+ E V G LF+ + +K +L+ + +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDAIQN 557
+ + YLHS+ I H D+K NI+L + P K+ DFG + I+A
Sbjct: 113 FLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNE 167
Query: 558 CTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+ GT ++ PE + L ++D++S GV+ LL+G L + +E
Sbjct: 168 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + + ++VV G + +V E +L E H
Sbjct: 74 VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK 133
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + G YLH +IHRD+K N+ L+E+ K+ DFG +
Sbjct: 134 RRKALTEPEARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT 189
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
V D + V+ GT Y+ PE L + + DV+S G ++ LL GK
Sbjct: 190 KVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + + ++VV G + +V E +L E H
Sbjct: 72 VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK 131
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + G YLH +IHRD+K N+ L+E+ K+ DFG +
Sbjct: 132 RRKALTEPEARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT 187
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
V D + V+ GT Y+ PE L + + DV+S G ++ LL GK
Sbjct: 188 KVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + + ++VV G + +V E +L E H
Sbjct: 48 VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK 107
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + G YLH +IHRD+K N+ L+E+ K+ DFG +
Sbjct: 108 RRKALTEPEARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT 163
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
V D + V+ GT Y+ PE L + + DV+S G ++ LL GK
Sbjct: 164 KVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNL-SWERRLRITAETAGVLSYLHS------- 515
G LE ++ L+ F G+L +++ KGN+ +W + + LSYLH
Sbjct: 81 GSNLEVEL-WLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 516 ETNVP-IIHRDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYL 573
E + P I HRD KS N+LL + T ++DFG A + P + GT Y+ PE L
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
Query: 574 QTCKLTDKS-----DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEI 628
+ + D+Y+ G+VL EL++ A +D P +E L F + Q+ LE
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVSRCKA--ADGPVDEYMLP--FEEEIGQHPSLEE 253
Query: 629 LDNRIVNDGNKQQLKE----VAKLAARCISV 655
L +V+ + +K+ LA C+++
Sbjct: 254 LQEVVVHKKMRPTIKDHWLKHPGLAQLCVTI 284
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 71
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME--LDHERMSYLLYQM 128
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 129 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRY 183
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + ++ +VV G + +V E +L E H
Sbjct: 75 VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK 134
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + GV YLH N +IHRD+K N+ L+++ K+ DFG +
Sbjct: 135 RRKAVTEPEARYFMRQTIQGV-QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT 190
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
+ D + + GT Y+ PE L + + D++S G +L LL GK
Sbjct: 191 KIEFDG-ERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + + ++VV G + +V E +L E H
Sbjct: 50 VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK 109
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + G YLH +IHRD+K N+ L+E+ K+ DFG +
Sbjct: 110 RRKALTEPEARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT 165
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
V D + T+ GT Y+ PE L + + DV+S G ++ LL GK
Sbjct: 166 KVEYDGERKKTLC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L DR VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-DRN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q LV E + + L + I + L ER + +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
Y PE + + D++S G ++ E++ K+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 408 VIGCGGSGNVYKGF-LPDRTPVAVK---KSKFVDQAKIDEFIN---ELVVVLQIN----R 456
++G GG G V+ G L DR VA+K +++ + + + + + E+ ++ ++
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 457 RNVVRLLGCCLETQ--VPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLH 514
V+RLL ETQ L++ + LF++I +KG L + + + H
Sbjct: 98 PGVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 515 SETNVPIIHRDVKSANILLD--ENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEY 572
S ++HRD+K NIL+D C K+ DFG+ L+ + T GT Y PE+
Sbjct: 157 SRG---VVHRDIKDENILIDLRRGCA-KLIDFGSGALL---HDEPYTDFDGTRVYSPPEW 209
Query: 573 LQTCKLTD-KSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDN 631
+ + + V+S G++L +++ G + D+ EIL+
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------------------EILEA 248
Query: 632 RIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSLE 669
+ + + L RC++ + RP+++E+ L+
Sbjct: 249 ELHFPAHVS--PDCCALIRRCLAPKPSSRPSLEEILLD 284
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + + ++VV G + +V E +L E H
Sbjct: 50 VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK 109
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + G YLH +IHRD+K N+ L+E+ K+ DFG +
Sbjct: 110 RRKALTEPEARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT 165
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
V D + T+ GT Y+ PE L + + DV+S G ++ LL GK
Sbjct: 166 KVEYDGERKKTLC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLPDR-TPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVR----L 462
IG G G V + R T VA+KK S F Q + E+ ++L+ NV+ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
LE + + + + L++ + K LS + + L Y+HS ++
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLL-KSQQLSNDHICYFLYQILRGLKYIHSAN---VL 166
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPI--DAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
HRD+K +N+L++ C K+ DFG +++ D T T Y PE + K
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYT 226
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + + ++VV G + +V E +L E H
Sbjct: 54 VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK 113
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + G YLH +IHRD+K N+ L+E+ K+ DFG +
Sbjct: 114 RRKALTEPEARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT 169
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
V D + T+ GT Y+ PE L + + DV+S G ++ LL GK
Sbjct: 170 KVEYDGERKKTLC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 443 EFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRI 502
+ + E+ V+ ++ N+++L + + LV E G LF+ I + + I
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVI 141
Query: 503 TAETAGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCT 559
+ ++YLH I+HRD+K N+LL+ ++ K+ DFG S + +N
Sbjct: 142 IKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAV-----FENQK 193
Query: 560 VVQGTLG---YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
++ LG Y+ PE L+ K +K DV+S GV+L LL G
Sbjct: 194 KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 429 AVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-H 487
V KS + + ++ E+ + ++ +VV G + +V E +L E H
Sbjct: 58 VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH 117
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS 547
+K E R + GV YLH N +IHRD+K N+ L+++ K+ DFG +
Sbjct: 118 KRRKAVTEPEARYFMRQTIQGV-QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
Query: 548 KLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
+ D + + GT Y+ PE L + + D++S G +L LL GK
Sbjct: 174 TKIEFDGERKKDLC-GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANIL 532
++V E+ G G LF++I +K ++ + R + + Y H I+HRD+K N+L
Sbjct: 85 VMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLL 140
Query: 533 LDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ-TCKLTDKSDVYSFGVVL 591
LD+N K++DFG S ++ + G+ Y PE + + DV+S G+VL
Sbjct: 141 LDDNLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
Query: 592 VELLTGKMAL 601
+L G++
Sbjct: 199 YVMLVGRLPF 208
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L +R VA+KK F +Q ELV++
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERN-VAIKKLSRPFQNQTHAKRAYRELVLMK 80
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQM 137
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRY 192
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
Y PE + + D++S G ++ E++ G
Sbjct: 193 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
TV Y ++ IG G G V Y L + F +Q ELV++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 455 NRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQMLC 137
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYR 192
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
PE + + D++S G ++ E++ K+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKI 223
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 406 ADVIGCGGSGNVYKG-FLPDRTPVAVK---KSKFVDQAKIDEFINELVVVLQINRRNVVR 461
+++G G VY+ + VA+K K + NE+ + Q+ +++
Sbjct: 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILE 75
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR--ITAETAGVLSYLHSETNV 519
L ++ LV E NG + ++ + E R + G+L YLHS
Sbjct: 76 LYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML-YLHSHG-- 132
Query: 520 PIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
I+HRD+ +N+LL N K++DFG + + + ++ T+ GT Y+ PE
Sbjct: 133 -ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC-GTPNYISPEIATRSAHG 190
Query: 580 DKSDVYSFGVVLVELLTGK 598
+SDV+S G + LL G+
Sbjct: 191 LESDVWSLGCMFYTLLIGR 209
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFE-HI 488
V KS + + ++ E+ + ++ +VV G + +V E +L E H
Sbjct: 75 VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK 134
Query: 489 HKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASK 548
+K E R + GV YLH N +IHRD+K N+ L+++ K+ DFG +
Sbjct: 135 RRKAVTEPEARYFMRQTIQGV-QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT 190
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
+ D + + GT Y+ PE L + + D++S G +L LL GK
Sbjct: 191 KIEFDGERKKDLC-GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 438 QAKIDEFINELVVVLQINRRNVVRLLGCCLE-TQVPL-LVYEFVGNGTLFEHIHK----K 491
+A+ ++E+ ++ ++ N+VR ++ T L +V E+ G L I K +
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 492 GNLSWERRLRITAETAGVLSYLH--SETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
L E LR+ + L H S+ ++HRD+K AN+ LD K+ DFG +++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 550 VPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVEL 594
+ D V GT Y+ PE + +KSD++S G +L EL
Sbjct: 166 LNHDEDFAKEFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVD---QAKIDEFINELVVVLQINRRNVVRLLGC 465
+G G G VYK ++ A+ +K ++ + +++++I E+ ++ + +V+LLG
Sbjct: 27 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 466 CLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT-AETAGVLSYLHSETNVPIIHR 524
++ EF G + + + E ++++ + L++LHS+ IIHR
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHR 141
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTD---- 580
D+K+ N+L+ +++DFG S + +Q GT ++ PE + + D
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 581 -KSDVYSFGVVLVEL 594
K+D++S G+ L+E+
Sbjct: 201 YKADIWSLGITLIEM 215
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 19/191 (9%)
Query: 430 VKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH 489
+ K + + ++ F E V++ +RR + +L + LV E+ G L +
Sbjct: 94 MNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLS 153
Query: 490 KKGNLSWERRLRITAETAG-----VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
K G RI AE A ++ + S + +HRD+K NILLD +++DF
Sbjct: 154 KFGE-------RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADF 206
Query: 545 GASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS-------DVYSFGVVLVELLTG 597
G+ + D V GT YL PE LQ + D ++ GV E+ G
Sbjct: 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266
Query: 598 KMALLSDKPEE 608
+ +D E
Sbjct: 267 QTPFYADSTAE 277
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLR 501
+ + E+ ++ Q++ N+ +L + LV E G LF+ I + S R
Sbjct: 71 ESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNC 558
I + ++Y H I+HRD+K N+LL+ ++ ++ DFG S +A +
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKX 185
Query: 559 TVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
GT Y+ PE L +K DV+S GV+L LL+G
Sbjct: 186 KDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L +R VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
Y PE + + D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVD---QAKIDEFINELVVVLQINRRNVVRLLGC 465
+G G G VYK ++ A+ +K ++ + +++++I E+ ++ + +V+LLG
Sbjct: 19 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 466 CLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRIT-AETAGVLSYLHSETNVPIIHR 524
++ EF G + + + E ++++ + L++LHS+ IIHR
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHR 133
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTD---- 580
D+K+ N+L+ +++DFG S + +Q GT ++ PE + + D
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 581 -KSDVYSFGVVLVEL 594
K+D++S G+ L+E+
Sbjct: 193 YKADIWSLGITLIEM 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 43/228 (18%)
Query: 405 YADVIGCGGSGNVYKG--FLPDRTPVAVK------KSKFVDQAKIDEFINELVVVLQI-N 455
+ V+G G G V + +T V+++ K K D ++ + ++EL ++ Q+ +
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK-ADSSEREALMSELKMMTQLGS 107
Query: 456 RRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGN---------------------- 493
N+V LLG C + L++E+ G L ++ K
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 494 -LSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPI 552
L++E L + A + +L ++ +HRD+ + N+L+ K+ DFG ++ +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 553 DAIQNCTVVQGT----LGYLDPEYLQTCKLTDKSDVYSFGVVLVELLT 596
D+ VV+G + ++ PE L T KSDV+S+G++L E+ +
Sbjct: 225 DS---NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 41/242 (16%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG---NLSWER 498
+ F ++ +++ +++V G C+ +LV EFV G+L ++ K N+ W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 499 RLRITAETAGVLSYLHSETNVPIIHRDVKSANILL-----DENCTP---KVSDFGAS-KL 549
+L + + A + +L T +IH +V + NILL + P K+SD G S +
Sbjct: 115 KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 550 VPIDAIQNCTVVQGTLGYLDPEYLQTCK-LTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+P D ++Q + ++ PE ++ K L +D +SFG L E+ +G DKP
Sbjct: 172 LPKD------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG-----GDKP-- 218
Query: 609 ERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSL 668
LS+L R L+ ++R + + E+A L C+ + RP+ + +
Sbjct: 219 --------LSALDSQRKLQFYEDR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
Query: 669 EL 670
+L
Sbjct: 269 DL 270
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
TV Y ++ IG G G V Y L + F +Q ELV++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 455 NRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQMLC 137
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYR 192
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
PE + + D++S G ++ E++ K+
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKI 223
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L++ E + G LF I ++G+ ++ R I + + +LHS I HRDVK N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPEN 139
Query: 531 ILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L +++ K++DFG +K +A+Q T Y+ PE L K D++S
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDMWSL 196
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 197 GVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L++ E + G LF I ++G+ ++ R I + + +LHS I HRDVK N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPEN 158
Query: 531 ILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L +++ K++DFG +K +A+Q T Y+ PE L K D++S
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDMWSL 215
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 216 GVIMYILLCG 225
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L +R VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
Y PE + + D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 438 QAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLL--VYEFVGNGTLFEHIHKKGNLS 495
+ I++ E+ ++ +++ NVV+L+ + L V+E V G + E K
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSE 136
Query: 496 WERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGAS-KLVPIDA 554
+ R G+ YLH + IIHRD+K +N+L+ E+ K++DFG S + DA
Sbjct: 137 DQARFYFQDLIKGI-EYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 555 IQNCTVVQGTLGYLDPEYLQTCK--LTDKS-DVYSFGVVLVELLTGKMALLSDK 605
+ + TV GT ++ PE L + + K+ DV++ GV L + G+ + ++
Sbjct: 193 LLSNTV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
TV Y ++ IG G G V Y L + F +Q ELV++ +
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 85
Query: 455 NRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQMLC 142
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYR 197
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
PE + + D++S G ++ E++ K+
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKI 228
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 24/278 (8%)
Query: 408 VIGCGGSGNVYKGFLPDR-TPVAVKKSKFVDQAKIDEFI--NELVVVLQINRRNVVRLLG 464
++G G G V K D VA+KK D K+ + I E+ ++ Q+ N+V LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
C + + LV+EFV + L + L ++ + + + + HS IIHR
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHR 148
Query: 525 DVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYL-QTCKLTDKS 582
D+K NIL+ ++ K+ DFG A L + + V T Y PE L K
Sbjct: 149 DIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV--ATRWYRAPELLVGDVKYGKAV 206
Query: 583 DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQN--------------RLLEI 628
DV++ G ++ E+ G+ D ++ M L +L RL EI
Sbjct: 207 DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEI 266
Query: 629 LDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
+ + + + V LA +C+ + ++RP E+
Sbjct: 267 KEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 22/186 (11%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET------NVPII-HRDV 526
L+ F G+L + + K +SW I A L+YLH + + P I HRD+
Sbjct: 99 LITAFHEKGSLSDFL-KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDI 157
Query: 527 KSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG---YLDPEYLQTCKLTDKS- 582
KS N+LL N T ++DFG + + +A ++ G +G Y+ PE L+ +
Sbjct: 158 KSKNVLLKNNLTACIADFGLA--LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDA 215
Query: 583 ----DVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGN 638
D+Y+ G+VL EL + A +D P +E L F + Q+ LE + +V+
Sbjct: 216 FLRIDMYAMGLVLWELASRCTA--ADGPVDEYMLP--FEEEIGQHPSLEDMQEVVVHKKK 271
Query: 639 KQQLKE 644
+ L++
Sbjct: 272 RPVLRD 277
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQI 454
TV Y ++ IG G G V Y L + F +Q ELV++ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 455 NRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAG 508
N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMSYLLYQMLC 131
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
+ +LHS IIHRD+K +NI++ +CT K+ DFG ++ + VV T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYR 186
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVELLTGKM 599
PE + + D++S G ++ E++ K+
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKI 217
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 41/242 (16%)
Query: 442 DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG---NLSWER 498
+ F ++ +++ +++V G C +LV EFV G+L ++ K N+ W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 499 RLRITAETAGVLSYLHSETNVPIIHRDVKSANILL-----DENCTP---KVSDFGAS-KL 549
+L + + A + +L T +IH +V + NILL + P K+SD G S +
Sbjct: 115 KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 550 VPIDAIQNCTVVQGTLGYLDPEYLQTCK-LTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
+P D ++Q + ++ PE ++ K L +D +SFG L E+ +G DKP
Sbjct: 172 LPKD------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG-----GDKP-- 218
Query: 609 ERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEVSL 668
LS+L R L+ ++R + + E+A L C+ + RP+ + +
Sbjct: 219 --------LSALDSQRKLQFYEDR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
Query: 669 EL 670
+L
Sbjct: 269 DL 270
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 39/299 (13%)
Query: 385 QSSEKAKIFTEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEF 444
++S+ + E +I ++IG G G VY G + + + ++ ++ F
Sbjct: 17 KASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAF 76
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIH-KKGNLSWERRLRIT 503
E++ Q NVV +G C+ ++ TL+ + K L + +I
Sbjct: 77 KREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIA 136
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAI-------Q 556
E + YLH++ I+H+D+KS N+ D N ++DFG L I +
Sbjct: 137 QEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFG---LFSISGVLQAGRRED 189
Query: 557 NCTVVQGTLGYLDPEYLQTCK---------LTDKSDVYSFGVVLVELLTGKMALLSDKPE 607
+ G L +L PE ++ + SDV++ G + EL + K +
Sbjct: 190 KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF---KTQ 246
Query: 608 EERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
++ + +K N L +I KE++ + C + EERPT ++
Sbjct: 247 PAEAIIWQMGTGMKPN-LSQI-----------GMGKEISDILLFCWAFEQEERPTFTKL 293
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 21/265 (7%)
Query: 366 FFEQNGGSILRQELSKLHGQSSEKAKIFTEEEIKTVTNNYAD-----VIGCGGSGNVYKG 420
+++ S LR+E + L + E AK FT + +K + + D VIG G G V
Sbjct: 37 LYDECNNSPLRREKNIL--EYLEWAKPFTSK-VKQMRLHREDFEILKVIGRGAFGEVAVV 93
Query: 421 FLPDRTPV----AVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVY 476
L + V + K + + +A+ F E V++ + + + L + LV
Sbjct: 94 KLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153
Query: 477 EFVGNGTLFEHIHKKGNLSWERRLRI-TAETAGVLSYLHSETNVPIIHRDVKSANILLDE 535
++ G L + K + E R AE + +H + +HRD+K NIL+D
Sbjct: 154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDM 210
Query: 536 NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC-----KLTDKSDVYSFGVV 590
N +++DFG+ + D +V GT Y+ PE LQ + + D +S GV
Sbjct: 211 NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC 270
Query: 591 LVELLTGKMALLSDKPEEERSLAMN 615
+ E+L G+ ++ E MN
Sbjct: 271 MYEMLYGETPFYAESLVETYGKIMN 295
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILL 533
LV+E + G++ HIHK+ + + + + A L +LH N I HRD+K NIL
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILC 144
Query: 534 DE--NCTP-KVSDFGASKLVPIDAIQNCTVVQ--------GTLGYLDPEYLQT----CKL 578
+ +P K+ DFG + ++ +C+ + G+ Y+ PE ++ +
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNG--DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 579 TDKS-DVYSFGVVLVELLTG 597
DK D++S GV+L LL+G
Sbjct: 203 YDKRCDLWSLGVILYILLSG 222
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHK--KGNLSWE--RRLR 501
E ++ +++ R +V L ET+ L LV + G + HI+ + N ++ R +
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTV- 560
TA+ L +LH II+RD+K N+LLD++ ++SD G + V + A Q T
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 561 VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
GT G++ PE L + D ++ GV L E++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHK--KGNLSWE--RRLR 501
E ++ +++ R +V L ET+ L LV + G + HI+ + N ++ R +
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTV- 560
TA+ L +LH II+RD+K N+LLD++ ++SD G + V + A Q T
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 561 VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
GT G++ PE L + D ++ GV L E++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 25/159 (15%)
Query: 457 RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
+N++ L+ + LV+E + G++ HI K+ + + R+ + A L +LH++
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 517 TNVPIIHRDVKSANILLD--ENCTP-KVSDFGASKLVPIDAIQNCTVVQ--------GTL 565
I HRD+K NIL + E +P K+ DF + ++ +CT + G+
Sbjct: 131 G---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLN--NSCTPITTPELTTPCGSA 185
Query: 566 GYLDPEYLQTCKLTDKS-------DVYSFGVVLVELLTG 597
Y+ PE ++ TD++ D++S GVVL +L+G
Sbjct: 186 EYMAPEVVEV--FTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHK--KGNLSWE--RRLR 501
E ++ +++ R +V L ET+ L LV + G + HI+ + N ++ R +
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTV- 560
TA+ L +LH II+RD+K N+LLD++ ++SD G + V + A Q T
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 561 VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
GT G++ PE L + D ++ GV L E++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPL-LVYEFVGNGTLFEHIHK--KGNLSWE--RRLR 501
E ++ +++ R +V L ET+ L LV + G + HI+ + N ++ R +
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTV- 560
TA+ L +LH II+RD+K N+LLD++ ++SD G + V + A Q T
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 561 VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
GT G++ PE L + D ++ GV L E++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 400 TVTNNYADV--IGCGGSGNV---YKGFLPDRTPVAVKK--SKFVDQAKIDEFINELVVVL 452
TV Y ++ IG G G V Y L +R VA+KK F +Q ELV++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERN-VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 453 QINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAET 506
+N +N++ LL E Q +V E + + L + I + L ER + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMSYLLYQM 135
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
+ +LHS IIHRD+K +NI++ + T K+ DFG ++ + VV T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRY 190
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
Y PE + + D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 406 ADVIGCGGSGNVYKGFLPDRTPV-AVKKSKFVDQAK-IDEFINELVVVLQINRRNVVRLL 463
+D++G G + NV++G + A+K + + +D + E V+ ++N +N+V+L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 464 GCCLETQV--PLLVYEFVGNGTLFEHIHKKGN---LSWERRLRITAETAGVLSYLHSETN 518
ET +L+ EF G+L+ + + N L L + + G +++L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 519 VPIIHRDVKSANILL----DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ 574
I+HR++K NI+ D K++DFGA++ + D + + GT YL P+ +
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--EQFVXLYGTEEYLHPDMYE 188
Query: 575 TCKLTDKS--------DVYSFGVVLVELLTGKMAL 601
L D++S GV TG +
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 409 IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRR-NVVRLLG 464
+G G G V Y + + + K + ++ + I + L++ R ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
++V E+ GN LF++I ++ +S + R + + Y H I+HR
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHR 137
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT--DKS 582
D+K N+LLDE+ K++DFG S ++ + G+ Y PE + + KL +
Sbjct: 138 DLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVI-SGKLYAGPEV 194
Query: 583 DVYSFGVVLVELLTGKM 599
DV+S GV+L +L ++
Sbjct: 195 DVWSCGVILYVMLCRRL 211
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 409 IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRR-NVVRLLG 464
+G G G V Y + + + K + ++ + I + L++ R ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
++V E+ GN LF++I ++ +S + R + + Y H I+HR
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHR 136
Query: 525 DVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT--DKS 582
D+K N+LLDE+ K++DFG S ++ + G+ Y PE + + KL +
Sbjct: 137 DLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVI-SGKLYAGPEV 193
Query: 583 DVYSFGVVLVELLTGKM 599
DV+S GV+L +L ++
Sbjct: 194 DVWSCGVILYVMLCRRL 210
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 500 LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFG-----------ASK 548
L I + A + +LHS+ ++HRD+K +NI + KV DFG +
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELL 595
L P+ A T GT Y+ PE + + K D++S G++L ELL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 406 ADVIGCGGSGNVYKGFLPDRTPV-AVKKSKFVDQAK-IDEFINELVVVLQINRRNVVRLL 463
+D++G G + NV++G + A+K + + +D + E V+ ++N +N+V+L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 464 GCCLETQV--PLLVYEFVGNGTLFEHIHKKGN---LSWERRLRITAETAGVLSYLHSETN 518
ET +L+ EF G+L+ + + N L L + + G +++L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 519 VPIIHRDVKSANILL----DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ 574
I+HR++K NI+ D K++DFGA++ + D + + GT YL P+ +
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--EQFVSLYGTEEYLHPDMYE 188
Query: 575 TCKLTDKS--------DVYSFGVVLVELLTGKMAL 601
L D++S GV TG +
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
+G G G VYK VA+K+ + D+ I E+ ++ +++ N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 467 LETQVPLLVYEFVGNG---TLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+ LV+EF+ L E+ K G + ++ + GV ++ H I+H
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGV-AHCHQHR---ILH 142
Query: 524 RDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
RD+K N+L++ + K++DFG ++ +P+ + + V TL Y P+ L K
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV---TLWYRAPDVLMGSKKYST 199
Query: 582 S-DVYSFGVVLVELLTGK 598
S D++S G + E++TGK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVV--LQINRRNVVRLLG 464
IG GGS V++ + A+K D +D + NE+ + LQ + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLS-WERRLRITAETAGVLSYLHSETNVPIIH 523
+ Q +V E GN L + KK ++ WER+ + +L +H+ I+H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGIVH 178
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVP--IDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
D+K AN L+ + K+ DFG A+++ P +++ V GT+ Y+ PE ++ +
Sbjct: 179 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV--GTVNYMPPEAIKDMSSSR 235
Query: 581 KS-----------DVYSFGVVLVELLTGK 598
++ DV+S G +L + GK
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVVLQINRRNVVRLLGCC 466
+G G G VYK VA+K+ + D+ I E+ ++ +++ N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 467 LETQVPLLVYEFVGNG---TLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+ LV+EF+ L E+ K G + ++ + GV ++ H I+H
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGV-AHCHQHR---ILH 142
Query: 524 RDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
RD+K N+L++ + K++DFG ++ +P+ + + V TL Y P+ L K
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV---TLWYRAPDVLMGSKKYST 199
Query: 582 S-DVYSFGVVLVELLTGK 598
S D++S G + E++TGK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVV--LQINRRNVVRLLG 464
IG GGS V++ + A+K D +D + NE+ + LQ + ++RL
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLS-WERRLRITAETAGVLSYLHSETNVPIIH 523
+ Q +V E GN L + KK ++ WER+ + +L +H+ I+H
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGIVH 131
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVP--IDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
D+K AN L+ + K+ DFG A+++ P +++ V GT+ Y+ PE ++ +
Sbjct: 132 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV--GTVNYMPPEAIKDMSSSR 188
Query: 581 KS-----------DVYSFGVVLVELLTGK 598
++ DV+S G +L + GK
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 438 QAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWE 497
Q +I+ I+ L + + ++++L ++V E+ GN LF++I ++ +S +
Sbjct: 48 QGRIEREISYLRL---LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ 103
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
R + + Y H I+HRD+K N+LLDE+ K++DFG S ++
Sbjct: 104 EARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 160
Query: 558 CTVVQGTLGYLDPEYLQTCKLT--DKSDVYSFGVVLVELLTGKM 599
+ G+ Y PE + + KL + DV+S GV+L +L ++
Sbjct: 161 TSC--GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRL 201
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 438 QAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWE 497
Q +I+ I+ L + + ++++L ++V E+ GN LF++I ++ +S +
Sbjct: 52 QGRIEREISYLRL---LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ 107
Query: 498 RRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQN 557
R + + Y H I+HRD+K N+LLDE+ K++DFG S ++
Sbjct: 108 EARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 164
Query: 558 CTVVQGTLGYLDPEYLQTCKLT--DKSDVYSFGVVLVELLTGKM 599
+ G+ Y PE + + KL + DV+S GV+L +L ++
Sbjct: 165 TSC--GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRL 205
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 50/226 (22%)
Query: 409 IGCGGSGNVYKGFLPDRTP---VAVKK--SKFVDQAKIDEFINELVVVLQIN-RRNVVRL 462
+G G G V+K DR VAVKK F + E++++ +++ N+V L
Sbjct: 17 LGKGAYGIVWKSI--DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 463 LGCCL--ETQVPLLVYEF-------VGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYL 513
L + LV+++ V + E +HK+ + + V+ YL
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQ---------YVVYQLIKVIKYL 125
Query: 514 HSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL----------VPIDAIQN------ 557
HS ++HRD+K +NILL+ C KV+DFG S+ +P+ +N
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 558 ----CTVVQGTLGYLDPE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
T T Y PE L + K T D++S G +L E+L GK
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 144
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 205 KSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 148
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVV--LQINRRNVVRLLG 464
IG GGS V++ + A+K D +D + NE+ + LQ + ++RL
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLS-WERRLRITAETAGVLSYLHSETNVPIIH 523
+ Q +V E GN L + KK ++ WER+ + +L +H+ I+H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGIVH 150
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVP--IDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
D+K AN L+ + K+ DFG A+++ P +++ V GT+ Y+ PE ++ +
Sbjct: 151 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV--GTVNYMPPEAIKDMSSSR 207
Query: 581 KS-----------DVYSFGVVLVELLTGK 598
++ DV+S G +L + GK
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 144
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 205 KSIDIWSVGCILAEMLSNR 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 394 TEEEIKTVTNNYADVIGCGGSGNVYKGFLPDRT--PVAVKK--SKFVDQAKIDEFINELV 449
T E++ V + V G G G V + RT VA+KK F + EL
Sbjct: 19 TAWEVRAVYRDLQPV-GSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQSELFAKRAYRELR 76
Query: 450 VVLQINRRNVVRLLGCCLETQVP------LLVYEFVGN--GTLFEHIHKKGNLSWERRLR 501
++ + NV+ LL + LV F+G G L +H L +R
Sbjct: 77 LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH----EKLGEDRIQF 132
Query: 502 ITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVV 561
+ + L Y+H+ IIHRD+K N+ ++E+C K+ DFG ++ D+ VV
Sbjct: 133 LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQA--DSEMXGXVV 187
Query: 562 QGTLGYLDPEY-LQTCKLTDKSDVYSFGVVLVELLTGK 598
T Y PE L + T D++S G ++ E++TGK
Sbjct: 188 --TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 151
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 212 KSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 152
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 213 KSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 143
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 204 KSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVV--LQINRRNVVRLLG 464
IG GGS V++ + A+K D +D + NE+ + LQ + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLS-WERRLRITAETAGVLSYLHSETNVPIIH 523
+ Q +V E GN L + KK ++ WER+ + +L +H+ I+H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGIVH 178
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVP--IDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
D+K AN L+ + K+ DFG A+++ P +++ V GT+ Y+ PE ++ +
Sbjct: 179 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV--GTVNYMPPEAIKDMSSSR 235
Query: 581 KS-----------DVYSFGVVLVELLTGK 598
++ DV+S G +L + GK
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 166
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 154
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 215 KSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 87/212 (41%), Gaps = 21/212 (9%)
Query: 402 TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINR--- 456
T+ Y V IG G G VYK P KS V + I+ + V + R
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 457 ---RNVVRLLGCCLETQVP-----LLVYEFVGNG--TLFEHIHKKGNLSWERRLRITAET 506
NVVRL+ C ++ LV+E V T + G L E + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
L +LH+ I+HRD+K NIL+ T K++DFG +++ + VV TL
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TLW 176
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
Y PE L D++S G + E+ K
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVV--LQINRRNVVRLLG 464
IG GGS V++ + A+K D +D + NE+ + LQ + ++RL
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLS-WERRLRITAETAGVLSYLHSETNVPIIH 523
+ Q +V E GN L + KK ++ WER+ + +L +H+ I+H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGIVH 150
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVP--IDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
D+K AN L+ + K+ DFG A+++ P +++ V GT+ Y+ PE ++ +
Sbjct: 151 SDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQV--GTVNYMPPEAIKDMSSSR 207
Query: 581 KS-----------DVYSFGVVLVELLTGK 598
++ DV+S G +L + GK
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 458 NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET 517
N+VRL E LV++ V G LFE I + S + +++ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 518 NVPIIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ 574
I+HRD+K N+LL + K++DFG + V D Q GT GYL PE L+
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLR 179
Query: 575 TCKLTDKSDVYSFGVVLVELLTG 597
D+++ GV+L LL G
Sbjct: 180 KDPYGKPVDMWACGVILYILLVG 202
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 151
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 212 KSIDIWSVGCILAEMLSNR 230
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 454 INRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYL 513
+ N+VRL E LV++ V G LFE I + S + +++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 514 HSETNVPIIHRDVKSANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDP 570
H I+HRD+K N+LL + K++DFG + V D Q GT GYL P
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSP 175
Query: 571 EYLQTCKLTDKSDVYSFGVVLVELLTG 597
E L+ D+++ GV+L LL G
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVV--LQINRRNVVRLLG 464
IG GGS V++ + A+K D +D + NE+ + LQ + ++RL
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLS-WERRLRITAETAGVLSYLHSETNVPIIH 523
+ Q +V E GN L + KK ++ WER+ + +L +H+ I+H
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGIVH 134
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVP--IDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
D+K AN L+ + K+ DFG A+++ P +++ V GT+ Y+ PE ++ +
Sbjct: 135 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV--GTVNYMPPEAIKDMSSSR 191
Query: 581 KS-----------DVYSFGVVLVELLTGK 598
++ DV+S G +L + GK
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 378 ELSKLHGQSSEKAKIFTEEEIKTVTNNYADVI---------GCGGSGNVYKGFLPDRTPV 428
+L +L ++ + + E++K V Y + + G G G V++ +
Sbjct: 40 KLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRLGRGSFGEVHR--------M 91
Query: 429 AVKKSKF---VDQAKIDEF-INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
K++ F V + +++ F + ELV ++ +V L G E + E + G+L
Sbjct: 92 KDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 151
Query: 485 FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCT-PKVSD 543
+ I + G L +R L + L YLH+ I+H DVK+ N+LL + + + D
Sbjct: 152 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCD 208
Query: 544 FGASKLVPIDAIQNCTV----VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
FG + + D + + + GT ++ PE + K D++S +++ +L G
Sbjct: 209 FGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 148
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC----- 576
+HRD+K N+LLD N +++DFG+ + D +V GT Y+ PE LQ
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
K + D +S GV + E+L G+ ++ E MN
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 378 ELSKLHGQSSEKAKIFTEEEIKTVTNNYAD---------VIGCGGSGNVYKGFLPDRTPV 428
+L +L ++ + + E++K V Y + +G G G V++ +
Sbjct: 26 KLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHR--------M 77
Query: 429 AVKKSKF---VDQAKIDEF-INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
K++ F V + +++ F + ELV ++ +V L G E + E + G+L
Sbjct: 78 KDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137
Query: 485 FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCT-PKVSD 543
+ I + G L +R L + L YLH+ I+H DVK+ N+LL + + + D
Sbjct: 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCD 194
Query: 544 FGASKLVPIDAIQNCTV----VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
FG + + D + + + GT ++ PE + K D++S +++ +L G
Sbjct: 195 FGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVV--LQINRRNVVRLLG 464
IG GGS V++ + A+K D +D + NE+ + LQ + ++RL
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLS-WERRLRITAETAGVLSYLHSETNVPIIH 523
+ Q +V E GN L + KK ++ WER+ + +L +H+ I+H
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGIVH 130
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVP--IDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
D+K AN L+ + K+ DFG A+++ P +++ V GT+ Y+ PE ++ +
Sbjct: 131 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV--GTVNYMPPEAIKDMSSSR 187
Query: 581 KS-----------DVYSFGVVLVELLTGK 598
++ DV+S G +L + GK
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA++K S F Q + E+ ++L+ N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTC----- 576
+HRD+K N+LLD N +++DFG+ + D +V GT Y+ PE LQ
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 577 KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
K + D +S GV + E+L G+ ++ E MN
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 17/185 (9%)
Query: 434 KFVDQAKIDEFINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG 492
K +D++K D E+ ++L+ + N++ L + + +V E + G L + I ++
Sbjct: 53 KIIDKSKRDP-TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK 111
Query: 493 NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANIL-LDENCTP---KVSDFGASK 548
S + + YLH++ ++HRD+K +NIL +DE+ P ++ DFG +K
Sbjct: 112 FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 549 LVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLS--- 603
+ +N ++ T ++ PE L+ D++S GV+L +LTG +
Sbjct: 169 QL---RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD 225
Query: 604 DKPEE 608
D PEE
Sbjct: 226 DTPEE 230
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 86/212 (40%), Gaps = 21/212 (9%)
Query: 402 TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINR--- 456
T+ Y V IG G G VYK P KS V + I+ + V + R
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 457 ---RNVVRLLGCCLETQVP-----LLVYEFVGNG--TLFEHIHKKGNLSWERRLRITAET 506
NVVRL+ C ++ LV+E V T + G L E + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
L +LH+ I+HRD+K NIL+ T K++DFG +++ VV TL
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLW 176
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
Y PE L D++S G + E+ K
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 397 EIKTVTNNYA--DVIGCGGSGNVYKGFLPDRTP---VAVKKSKFVDQAKIDEFIN----- 446
++K+ Y D +G G VYK D+ VA+KK K +++ + IN
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 447 ELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITA-- 504
E+ ++ +++ N++ LL LV++F+ T E I K +L I A
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPS-HIKAYM 118
Query: 505 -ETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLV--PIDAIQNCTVV 561
T L YLH I+HRD+K N+LLDEN K++DFG +K P A + V
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV- 174
Query: 562 QGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELL 595
T Y PE L ++ D+++ G +L ELL
Sbjct: 175 --TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL-KCQHLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ C K+ DFG +++ D + + T Y PE + K
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 378 ELSKLHGQSSEKAKIFTEEEIKTVTNNYAD---------VIGCGGSGNVYKGFLPDRTPV 428
+L +L ++ + + E++K V Y + +G G G V++ +
Sbjct: 42 KLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHR--------M 93
Query: 429 AVKKSKF---VDQAKIDEF-INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTL 484
K++ F V + +++ F + ELV ++ +V L G E + E + G+L
Sbjct: 94 KDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 153
Query: 485 FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCT-PKVSD 543
+ I + G L +R L + L YLH+ I+H DVK+ N+LL + + + D
Sbjct: 154 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCD 210
Query: 544 FGASKLVPIDAIQNCTV----VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
FG + + D + + + GT ++ PE + K D++S +++ +L G
Sbjct: 211 FGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKF--VDQAKIDEFINELVVV--LQINRRNVVRLLG 464
IG GGS V++ + A+K D +D + NE+ + LQ + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLS-WERRLRITAETAGVLSYLHSETNVPIIH 523
+ Q +V E GN L + KK ++ WER+ + +L +H+ I+H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGIVH 178
Query: 524 RDVKSANILLDENCTPKVSDFG-ASKLVP--IDAIQNCTVVQGTLGYLDPEYLQTCKLTD 580
D+K AN L+ + K+ DFG A+++ P +++ V G + Y+ PE ++ +
Sbjct: 179 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV--GAVNYMPPEAIKDMSSSR 235
Query: 581 KS-----------DVYSFGVVLVELLTGK 598
++ DV+S G +L + GK
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 161
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 162 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 220 GVIMYILLCG 229
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 86/212 (40%), Gaps = 21/212 (9%)
Query: 402 TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINR--- 456
T+ Y V IG G G VYK P KS V + I+ + V + R
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 457 ---RNVVRLLGCCLETQVP-----LLVYEFVGNG--TLFEHIHKKGNLSWERRLRITAET 506
NVVRL+ C ++ LV+E V T + G L E + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 507 AGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLG 566
L +LH+ I+HRD+K NIL+ T K++DFG +++ VV TL
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLW 176
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
Y PE L D++S G + E+ K
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 21/140 (15%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILL 533
LV+E + G++ HIHK+ + + + + A L +LH N I HRD+K NIL
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILC 144
Query: 534 DE--NCTP-KVSDFGASKLVPIDAIQNCTVVQ--------GTLGYLDPEYLQT----CKL 578
+ +P K+ DF + ++ +C+ + G+ Y+ PE ++ +
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNG--DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 579 TDKS-DVYSFGVVLVELLTG 597
DK D++S GV+L LL+G
Sbjct: 203 YDKRCDLWSLGVILYILLSG 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 153
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 154 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 212 GVIMYILLCG 221
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 151
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 152 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 210 GVIMYILLCG 219
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 152
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 153 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 211 GVIMYILLCG 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 500 LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFG-----------ASK 548
L I + A + +LHS+ ++HRD+K +NI + KV DFG +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 549 LVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELL 595
L P+ A GT Y+ PE + + K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 146
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 147 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 205 GVIMYILLCG 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 147
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 145
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 24/235 (10%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKT---VTNNYADV--IGCGGSGNVYKGF-LPDRTPVAVKK 432
++ H S E+ + +E KT V Y ++ +G G G+V F VAVKK
Sbjct: 1 MAHHHHHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 60
Query: 433 SKFVDQAKID--EFINELVVVLQINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTL 484
Q+ I EL ++ + NV+ LL E LV +G
Sbjct: 61 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD-- 118
Query: 485 FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+I K L+ + + + L Y+HS IIHRD+K +N+ ++E+C K+ DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 175
Query: 545 GASKLVPIDAIQNCTVVQGTLGYLDPE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
G ++ T T Y PE L D++S G ++ ELLTG+
Sbjct: 176 GLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 191
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 250 GVIMYILLCG 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 147
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 197
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D++S
Sbjct: 198 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 256 GVIMYILLCG 265
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 24/235 (10%)
Query: 379 LSKLHGQSSEKAKIFTEEEIKT---VTNNYADV--IGCGGSGNVYKGF-LPDRTPVAVKK 432
++ H S E+ + +E KT V Y ++ +G G G+V F VAVKK
Sbjct: 1 MAHHHHHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 60
Query: 433 SKFVDQAKID--EFINELVVVLQINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTL 484
Q+ I EL ++ + NV+ LL E LV +G
Sbjct: 61 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD-- 118
Query: 485 FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDF 544
+I K L+ + + + L Y+HS IIHRD+K +N+ ++E+C K+ DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 175
Query: 545 GASKLVPIDAIQNCTVVQGTLGYLDPE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
G ++ T T Y PE L D++S G ++ ELLTG+
Sbjct: 176 GLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 404 NYADVIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLL 463
+Y D++ G+ Y A+K+ +Q +E E + N N++RL+
Sbjct: 43 SYVDLVEGLHDGHFY----------ALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 464 GCCLE----TQVPLLVYEFVGNGTLFEHIHK---KGN-LSWERRLRITAETAGVLSYLHS 515
CL L+ F GTL+ I + KGN L+ ++ L + L +H+
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDA--------IQNCTVVQGTLGY 567
+ HRD+K NILL + P + D G+ I +Q+ + T+ Y
Sbjct: 153 KGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 568 LDPEYLQT---CKLTDKSDVYSFGVVLVELLTGK 598
PE C + +++DV+S G VL ++ G+
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 85/215 (39%), Gaps = 24/215 (11%)
Query: 402 TNNYADV--IGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQIN--RR 457
T+ Y V IG G G VYK P KS V + V ++ RR
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 458 -------NVVRLLGCCLETQVP-----LLVYEFVGNG--TLFEHIHKKGNLSWERRLRIT 503
NVVRL+ C ++ LV+E V T + G L E +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLM 126
Query: 504 AETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ L +LH+ I+HRD+K NIL+ T K++DFG +++ VV
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV-- 181
Query: 564 TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
TL Y PE L D++S G + E+ K
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 21/223 (9%)
Query: 386 SSEKAKIFTEEEIKTVTNNY---ADVIGCGGSGNV----YKGFLPDRTPVAVKKSKFVDQ 438
SS + ++ + K N Y + IG G G V KG R + K FV+
Sbjct: 8 SSGRENLYFQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVED 66
Query: 439 AKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWER 498
+D F E+ ++ ++ N++RL + LV E G LFE + K
Sbjct: 67 --VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 124
Query: 499 RLRITAETAGVLSYLHSETNVPIIHRDVKSANILL--DENCTP-KVSDFG-ASKLVPIDA 554
RI + ++Y H + + HRD+K N L D +P K+ DFG A++ P
Sbjct: 125 AARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
Query: 555 IQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
++ GT Y+ P+ L+ + D +S GV++ LL G
Sbjct: 182 MRTKV---GTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCG 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C ++ DFG ++ A + T T Y
Sbjct: 136 LKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWYRA 188
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELL GK
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 454 INRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYL 513
+ N+VRL E L+++ V G LFE I + S + + +
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 514 HSETNVPIIHRDVKSANILLD---ENCTPKVSDFGASKLVPIDAIQNCTV-VQGTLGYLD 569
H + ++HRD+K N+LL + K++DFG + + ++ Q GT GYL
Sbjct: 138 H---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLS 192
Query: 570 PEYLQTCKLTDKSDVYSFGVVLVELLTG 597
PE L+ D+++ GV+L LL G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFV---DQAKIDEF-INELVVVLQINRRNVVRLLG 464
IG G G V+K D + K KF+ D I + + E+ ++ Q+ N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIK-KFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
+ LV+E+ + L E + + IT +T +++ H IHR
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHR 126
Query: 525 DVKSANILLDENCTPKVSDFGASKLV--PIDAIQNCTVVQGTLGYLDPEYL-QTCKLTDK 581
DVK NIL+ ++ K+ DFG ++L+ P D + T Y PE L +
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV---ATRWYRSPELLVGDTQYGPP 183
Query: 582 SDVYSFGVVLVELLTG 597
DV++ G V ELL+G
Sbjct: 184 VDVWAIGCVFAELLSG 199
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 145
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVY 585
+L N K++DFG +K + + ++ + T Y+ PE L K D++
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 586 SFGVVLVELLTG 597
S GV++ LL G
Sbjct: 202 SLGVIMYILLCG 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 409 IGCGGSGNVYKGFLPDRT--PVAVKKSKFVDQAKI--DEFINELVVVLQINRRNVVRLLG 464
+G G G+V + R+ VA+KK Q++I EL+++ + NV+ LL
Sbjct: 50 VGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKK---GNLSWERRLRITAETAGVLSYLHSETNVPI 521
Y+F + +K S E+ + + L Y+HS +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---V 165
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
+HRD+K N+ ++E+C K+ DFG ++ DA VV T Y PE + + ++
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHA--DAEMTGYVV--TRWYRAPEVILSWMHYNQ 221
Query: 582 S-DVYSFGVVLVELLTGK 598
+ D++S G ++ E+LTGK
Sbjct: 222 TVDIWSVGCIMAEMLTGK 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 407 DVIGCGGSGNVYK-GFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGC 465
+++G G G V+K +A K K +E NE+ V+ Q++ N+++L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 466 CLETQVPLLVYEFVGNGTLFEHIHKKG-NLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
+LV E+V G LF+ I + NL+ + + + ++H + I+H
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHL 211
Query: 525 DVKSANIL-LDENCTP-KVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
D+K NIL ++ + K+ DFG A + P + ++ V GT +L PE + ++
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK---VNFGTPEFLAPEVVNYDFVSFP 268
Query: 582 SDVYSFGVVLVELLTGKMALLSDKPEE 608
+D++S GV+ LL+G L D E
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAE 295
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 384 GQSSEKAKIFTEEEIKT---VTNNYADV--IGCGGSGNVYKGF-LPDRTPVAVKKSKFVD 437
G S E+ + +E KT V Y ++ +G G G+V F VAVKK
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 438 QAKID--EFINELVVVLQINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIH 489
Q+ I EL ++ + NV+ LL E LV +G +I
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIV 128
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K L+ + + + L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR- 184
Query: 550 VPIDAIQNCTVVQGTLGYLDPE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
T T Y PE L D++S G ++ ELLTG+
Sbjct: 185 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 39/216 (18%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 10 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYL-------- 513
LL + T+ L + +FEH+H+ + + SYL
Sbjct: 66 LLDV-IHTENKLYL--------VFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 514 --HSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLD 569
HS ++HRD+K N+L++ K++DFG ++ VP+ + V TL Y
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 170
Query: 570 PEYLQTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
PE L CK + D++S G + E++T + D
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 484 LFEHIHKKGNLSWERRL-RITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVS 542
++ + KG E L +I L +LHS+ +V IHRDVK +N+L++ K+
Sbjct: 139 FYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMC 196
Query: 543 DFGASKLVPIDAIQNCTVVQGTLGYLDPEY----LQTCKLTDKSDVYSFGVVLVEL 594
DFG S + +D++ T+ G Y+ PE L + KSD++S G+ ++EL
Sbjct: 197 DFGISGYL-VDSVAK-TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRA 197
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRA 197
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRA 197
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET-----NVPIIHRDVKS 528
LV ++ +G+LF+++++ ++ E +++ TA L++LH E I HRD+KS
Sbjct: 84 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 142
Query: 529 ANILLDENCTPKVSDFGA-----SKLVPIDAIQNCTVVQGTLGYLDPEYL------QTCK 577
NIL+ +N T ++D G S ID N V GT Y+ PE L + +
Sbjct: 143 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKRYMAPEVLDDSINMKHFE 200
Query: 578 LTDKSDVYSFGVVLVEL 594
++D+Y+ G+V E+
Sbjct: 201 SFKRADIYAMGLVFWEI 217
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET-----NVPIIHRDVKS 528
L+ ++ NG+L++++ K L + L++ + L +LH+E I HRD+KS
Sbjct: 112 LITDYHENGSLYDYL-KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170
Query: 529 ANILLDENCTPKVSDFG-ASKLVP----IDAIQNCTVVQGTLGYLDPEYLQTCKLTDK-- 581
NIL+ +N T ++D G A K + +D N V GT Y+ PE L +
Sbjct: 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV--GTKRYMPPEVLDESLNRNHFQ 228
Query: 582 ----SDVYSFGVVLVEL 594
+D+YSFG++L E+
Sbjct: 229 SYIMADMYSFGLILWEV 245
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + LS+ HS
Sbjct: 67 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 175
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET-----NVPIIHRDVKS 528
LV ++ +G+LF+++++ ++ E +++ TA L++LH E I HRD+KS
Sbjct: 81 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 139
Query: 529 ANILLDENCTPKVSDFGA-----SKLVPIDAIQNCTVVQGTLGYLDPEYL------QTCK 577
NIL+ +N T ++D G S ID N V GT Y+ PE L + +
Sbjct: 140 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKRYMAPEVLDDSINMKHFE 197
Query: 578 LTDKSDVYSFGVVLVEL 594
++D+Y+ G+V E+
Sbjct: 198 SFKRADIYAMGLVFWEI 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 484 LFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
L + IH L+ E + L Y+HS +IHRD+K +N+L++ENC K+ D
Sbjct: 146 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGD 202
Query: 544 FGASKLV---PIDAIQNCTVVQGTLGYLDPEYLQTC-KLTDKSDVYSFGVVLVELLTGK 598
FG ++ + P + T T Y PE + + + T D++S G + E+L +
Sbjct: 203 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET-----NVPIIHRDVKS 528
LV ++ +G+LF+++++ ++ E +++ TA L++LH E I HRD+KS
Sbjct: 117 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175
Query: 529 ANILLDENCTPKVSDFGA-----SKLVPIDAIQNCTVVQGTLGYLDPEYL------QTCK 577
NIL+ +N T ++D G S ID N V GT Y+ PE L + +
Sbjct: 176 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKRYMAPEVLDDSINMKHFE 233
Query: 578 LTDKSDVYSFGVVLVEL 594
++D+Y+ G+V E+
Sbjct: 234 SFKRADIYAMGLVFWEI 250
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET-----NVPIIHRDVKS 528
LV ++ +G+LF+++++ ++ E +++ TA L++LH E I HRD+KS
Sbjct: 79 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 137
Query: 529 ANILLDENCTPKVSDFGA-----SKLVPIDAIQNCTVVQGTLGYLDPEYL------QTCK 577
NIL+ +N T ++D G S ID N V GT Y+ PE L + +
Sbjct: 138 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKRYMAPEVLDDSINMKHFE 195
Query: 578 LTDKSDVYSFGVVLVEL 594
++D+Y+ G+V E+
Sbjct: 196 SFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET-----NVPIIHRDVKS 528
LV ++ +G+LF+++++ ++ E +++ TA L++LH E I HRD+KS
Sbjct: 104 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 162
Query: 529 ANILLDENCTPKVSDFGA-----SKLVPIDAIQNCTVVQGTLGYLDPEYL------QTCK 577
NIL+ +N T ++D G S ID N V GT Y+ PE L + +
Sbjct: 163 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKRYMAPEVLDDSINMKHFE 220
Query: 578 LTDKSDVYSFGVVLVEL 594
++D+Y+ G+V E+
Sbjct: 221 SFKRADIYAMGLVFWEI 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYL 568
L YLHS+ I+H+D+K N+LL T K+S G A L P A C QG+ +
Sbjct: 122 LEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 569 DPEYLQTCKLTD--KSDVYSFGVVLVELLTG 597
PE K D++S GV L + TG
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 409 IGCGGSGNVYKGFLPDRT--PVAVKKSKFVDQAKI--DEFINELVVVLQINRRNVVRLLG 464
+G G G+V + R+ VA+KK Q++I EL+++ + NV+ LL
Sbjct: 32 VGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKK---GNLSWERRLRITAETAGVLSYLHSETNVPI 521
Y+F + +K S E+ + + L Y+HS +
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---V 147
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
+HRD+K N+ ++E+C K+ DFG ++ DA VV T Y PE + + ++
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARHA--DAEMTGYVV--TRWYRAPEVILSWMHYNQ 203
Query: 582 S-DVYSFGVVLVELLTGK 598
+ D++S G ++ E+LTGK
Sbjct: 204 TVDIWSVGCIMAEMLTGK 221
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSET-----NVPIIHRDVKS 528
LV ++ +G+LF+++++ ++ E +++ TA L++LH E I HRD+KS
Sbjct: 78 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136
Query: 529 ANILLDENCTPKVSDFGA-----SKLVPIDAIQNCTVVQGTLGYLDPEYL------QTCK 577
NIL+ +N T ++D G S ID N V GT Y+ PE L + +
Sbjct: 137 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKRYMAPEVLDDSINMKHFE 194
Query: 578 LTDKSDVYSFGVVLVEL 594
++D+Y+ G+V E+
Sbjct: 195 SFKRADIYAMGLVFWEI 211
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 484 LFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
L + IH L+ E + L Y+HS +IHRD+K +N+L++ENC K+ D
Sbjct: 145 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGD 201
Query: 544 FGASKLV---PIDAIQNCTVVQGTLGYLDPEYLQTC-KLTDKSDVYSFGVVLVELLTGK 598
FG ++ + P + T T Y PE + + + T D++S G + E+L +
Sbjct: 202 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTP---VAVKKSKFVD--QAKIDEFINELVVVLQINRRNVVRLL 463
IG G G V+K +R VA+K+ + D + + E+ ++ ++ +N+VRL
Sbjct: 10 IGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+ LV+EF G+L E + L + HS ++H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLH 124
Query: 524 RDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
RD+K N+L++ N K++DFG ++ +P+ V TL Y P+ L KL
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV---TLWYRPPDVLFGAKLYST 181
Query: 582 S-DVYSFGVVLVELLTGKMALL 602
S D++S G + EL L
Sbjct: 182 SIDMWSAGCIFAELANAARPLF 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ K+ DFG +++ D + + T Y PE + K
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 434 KFVDQAKIDEFINELVVVLQINRR-NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG 492
K +D++K D E+ ++L+ + N++ L + + +V E G L + I ++
Sbjct: 53 KIIDKSKRDP-TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK 111
Query: 493 NLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANIL-LDENCTP---KVSDFGASK 548
S + + YLH++ ++HRD+K +NIL +DE+ P ++ DFG +K
Sbjct: 112 FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 549 LVPIDAIQNCTVVQG--TLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLS--- 603
+ +N + T ++ PE L+ D++S GV+L LTG +
Sbjct: 169 QL---RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD 225
Query: 604 DKPEE 608
D PEE
Sbjct: 226 DTPEE 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 210
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 67 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 175
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 157 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 209
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 13 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 69 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 177
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 12 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 68 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 176
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 202
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 202
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 14 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 70 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 178
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 13 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 69 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 177
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 202
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 24/228 (10%)
Query: 386 SSEKAKIFTEEEIKT---VTNNYADV--IGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQA 439
S E+ + +E KT V Y ++ +G G G+V F VAVKK Q+
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 440 KID--EFINELVVVLQINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKK 491
I EL ++ + NV+ LL E LV +G +I K
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKX 119
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
L+ + + + L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 552 IDAIQNCTVVQGTLGYLDPE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
T T Y PE L D++S G ++ ELLTG+
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 157 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 209
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 148 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 200
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 210
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 195
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 14 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 70 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 178
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 196
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 136 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 188
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 137 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 189
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 407 DVIGCGGSGNV----YKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRL 462
+ IG G G V KG R + K FV+ +D F E+ ++ ++ N++RL
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVED--VDRFKQEIEIMKSLDHPNIIRL 71
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+ LV E G LFE + K RI + ++Y H + +
Sbjct: 72 YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVA 128
Query: 523 HRDVKSANILL--DENCTP-KVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
HRD+K N L D +P K+ DFG A++ P ++ GT Y+ P+ L+
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---GTPYYVSPQVLEGL-Y 184
Query: 579 TDKSDVYSFGVVLVELLTG 597
+ D +S GV++ LL G
Sbjct: 185 GPECDEWSAGVMMYVLLCG 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 13 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 69 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 177
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 12 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 68 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 176
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ K+ DFG +++ D + + T Y PE + K
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 186
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 192
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 14 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 462 LLGCCLETQVPLLVYEFVGNG-TLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
LL LV+EF+ F + + L++ HS
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L CK
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEILLGCKY 183
Query: 579 TDKS-DVYSFGVVLVELLTGKMALLSD 604
+ D++S G + E++T + D
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 186
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 67 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 175
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 192
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 18 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 74 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 182
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 67 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 175
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 12 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 68 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 176
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 186
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 67 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 175
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFLP-DRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ K+ DFG +++ D + + T Y PE + K
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 192
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 161 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 213
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 15 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 71 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 179
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 15 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 71 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 179
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ K+ DFG +++ D + + T Y PE + K
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 135 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 187
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 197
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 10 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 66 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 174
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 135 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 187
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 195
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 12 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 68 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 176
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 67 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 175
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + L++ + K +LS + + L Y+HS ++
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 166
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ K+ DFG +++ D + + T Y PE + K
Sbjct: 167 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 10 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 66 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL 174
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKF---VDQAKIDEF-INELVVV 451
EE+ T+ +G G G V++ + K++ F V + +++ F EL+
Sbjct: 90 EEVHWATHQLR--LGRGSFGEVHR--------MEDKQTGFQCAVKKVRLEVFRAEELMAC 139
Query: 452 LQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS 511
+ +V L G E + E + G+L + + ++G L +R L + L
Sbjct: 140 AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLE 199
Query: 512 YLHSETNVPIIHRDVKSANILLDENCT-PKVSDFGASKLVPIDAIQNCTV----VQGTLG 566
YLHS I+H DVK+ N+LL + + + DFG + + D + + + GT
Sbjct: 200 YLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET 256
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
++ PE + K DV+S +++ +L G
Sbjct: 257 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 14 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 462 LLGCCLETQVPLLVYEFVG-NGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
LL LV+EF+ + F + + L++ HS
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L CK
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEILLGCKY 183
Query: 579 TDKS-DVYSFGVVLVELLTGKMALLSD 604
+ D++S G + E++T + D
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 10 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 66 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 174
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILL 533
+V E + G LF+ + L + + YLH IIHRD+K N+LL
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLL 286
Query: 534 ---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL---QTCKLTDKSDVYSF 587
+E+C K++DFG SK++ ++ + GT YL PE L T D +S
Sbjct: 287 SSQEEDCLIKITDFGHSKILGETSLMR--TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 344
Query: 588 GVVLVELLTG 597
GV+L L+G
Sbjct: 345 GVILFICLSG 354
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 148
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ K+ DFG +++ D + + T Y PE + K
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 67 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 175
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILL 533
+V E + G LF+ + L + + YLH IIHRD+K N+LL
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLL 272
Query: 534 ---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL---QTCKLTDKSDVYSF 587
+E+C K++DFG SK++ ++ + GT YL PE L T D +S
Sbjct: 273 SSQEEDCLIKITDFGHSKILGETSLMR--TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330
Query: 588 GVVLVELLTG 597
GV+L L+G
Sbjct: 331 GVILFICLSG 340
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 10 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 66 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 174
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
CK + D++S G + E++T + D
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPEN 191
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K + + T T Y+ PE L K D +S
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 588 GVVLVELLTG 597
GV+ LL G
Sbjct: 250 GVIXYILLCG 259
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 12 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 462 LLGCCLETQVPLLVYEFVG-NGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
LL LV+EF+ + F + + L++ HS
Sbjct: 68 LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L CK
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEILLGCKY 181
Query: 579 TDKS-DVYSFGVVLVELLTGKMALLSD 604
+ D++S G + E++T + D
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 409 IGCGGSGNVYKGFL-PDRTPVAVKK-SKFVDQAKIDEFINELVVVLQINRRNVVRL---- 462
IG G G V + ++ VA+KK S F Q + E+ ++L+ N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 463 LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPII 522
+E + + + + L++ + K +LS + + L Y+HS ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 523 HRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQ--GTLGYLDPEYLQTCKLTD 580
HRD+K +N+LL+ K+ DFG +++ D + + T Y PE + K
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 581 KS-DVYSFGVVLVELLTGK 598
KS D++S G +L E+L+ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITA------ETAGVLSYLHSETNVPIIHRDVK 527
+V E + G LF+ + GN +RL+ + + YLH IIHRD+K
Sbjct: 97 IVLELMEGGELFDKV--VGN----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLK 147
Query: 528 SANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL---QTCKLTDK 581
N+LL +E+C K++DFG SK++ ++ + GT YL PE L T
Sbjct: 148 PENVLLSSQEEDCLIKITDFGHSKILGETSLMR--TLCGTPTYLAPEVLVSVGTAGYNRA 205
Query: 582 SDVYSFGVVLVELLTG 597
D +S GV+L L+G
Sbjct: 206 VDCWSLGVILFICLSG 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 428 VAVKKSKFVDQAKIDEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEH 487
+ KK D K++ E + + N+VRL E L+++ V G LFE
Sbjct: 44 INTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFED 100
Query: 488 IHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLD---ENCTPKVSDF 544
I + S + + + H + ++HR++K N+LL + K++DF
Sbjct: 101 IVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADF 157
Query: 545 GASKLVPIDAIQNCTV-VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
G + + ++ Q GT GYL PE L+ D+++ GV+L LL G
Sbjct: 158 GLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITA 504
I E+ ++ ++N N+V+LL LV+EF L + + K + S + +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPL 104
Query: 505 ETAGV------LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQ 556
+ + L++ HS ++HRD+K N+L++ K++DFG ++ VP+
Sbjct: 105 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161
Query: 557 NCTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
+ V TL Y PE L CK + D++S G + E++T + D
Sbjct: 162 HEVV---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 445 INELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITA 504
I E+ ++ ++N N+V+LL LV+EF L + + K + S + +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPL 103
Query: 505 ETAGV------LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQ 556
+ + L++ HS ++HRD+K N+L++ K++DFG ++ VP+
Sbjct: 104 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160
Query: 557 NCTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
+ V TL Y PE L CK + D++S G + E++T + D
Sbjct: 161 HEVV---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILL 533
+V E + G LF+ + L + + YLH IIHRD+K N+LL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLL 147
Query: 534 ---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL---QTCKLTDKSDVYSF 587
+E+C K++DFG SK++ ++ + GT YL PE L T D +S
Sbjct: 148 SSQEEDCLIKITDFGHSKILGETSLMR--TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
Query: 588 GVVLVELLTG 597
GV+L L+G
Sbjct: 206 GVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITA------ETAGVLSYLHSETNVPIIHRDVK 527
+V E + G LF+ + GN +RL+ + + YLH IIHRD+K
Sbjct: 90 IVLELMEGGELFDKV--VGN----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLK 140
Query: 528 SANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL---QTCKLTDK 581
N+LL +E+C K++DFG SK++ ++ + GT YL PE L T
Sbjct: 141 PENVLLSSQEEDCLIKITDFGHSKILGETSLMR--TLCGTPTYLAPEVLVSVGTAGYNRA 198
Query: 582 SDVYSFGVVLVELLTG 597
D +S GV+L L+G
Sbjct: 199 VDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITA------ETAGVLSYLHSETNVPIIHRDVK 527
+V E + G LF+ + GN +RL+ + + YLH IIHRD+K
Sbjct: 91 IVLELMEGGELFDKV--VGN----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLK 141
Query: 528 SANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL---QTCKLTDK 581
N+LL +E+C K++DFG SK++ ++ + GT YL PE L T
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMR--TLCGTPTYLAPEVLVSVGTAGYNRA 199
Query: 582 SDVYSFGVVLVELLTG 597
D +S GV+L L+G
Sbjct: 200 VDCWSLGVILFICLSG 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 25/203 (12%)
Query: 409 IGCGGSGNV---YKGFLPDRTPVAVKKSKFVDQAKID--EFINELVVVLQINRRNVVRLL 463
+G G G+V Y L R VAVKK Q+ I EL ++ + NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 464 -----GCCLE--TQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSE 516
+E ++V LV +G +I K LS E + + L Y+HS
Sbjct: 94 DVFTPATSIEDFSEV-YLVTTLMGAD--LNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 517 TNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPE-YLQT 575
IIHRD+K +N+ ++E+ ++ DFG ++ A + T T Y PE L
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNW 203
Query: 576 CKLTDKSDVYSFGVVLVELLTGK 598
D++S G ++ ELL GK
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 474 LVYEFVGNGTLFEHIHKKGNLSWERRLRITA------ETAGVLSYLHSETNVPIIHRDVK 527
+V E + G LF+ + GN +RL+ + + YLH IIHRD+K
Sbjct: 91 IVLELMEGGELFDKV--VGN----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLK 141
Query: 528 SANILL---DENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL---QTCKLTDK 581
N+LL +E+C K++DFG SK++ ++ + GT YL PE L T
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMR--TLCGTPTYLAPEVLVSVGTAGYNRA 199
Query: 582 SDVYSFGVVLVELLTG 597
D +S GV+L L+G
Sbjct: 200 VDCWSLGVILFICLSG 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTL-FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
LL LV+EF+ F + + L++ HS
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L CK
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEILLGCKY 180
Query: 579 TDKS-DVYSFGVVLVELLTGKMALLSD 604
+ D++S G + E++T + D
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 13 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 462 LLGCCLETQVPLLVYEFVGNGTL-FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
LL LV+EF+ F + + L++ HS
Sbjct: 69 LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L CK
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEILLGCKY 182
Query: 579 TDKS-DVYSFGVVLVELLTGKMALLSD 604
+ D++S G + E++T + D
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T T Y
Sbjct: 167 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRA 219
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 14 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 462 LLGCCLETQVPLLVYEFVGNGTL-FEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
LL LV+EF+ F + + L++ HS
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L CK
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEILLGCKY 183
Query: 579 TDKS-DVYSFGVVLVELLTGKMALLSD 604
+ D++S G + E++T + D
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 484 LFEHIHKKGNLSWERRL-RITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVS 542
++ + KG E L +I L +LHS+ +V IHRDVK +N+L++ K+
Sbjct: 95 FYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMC 152
Query: 543 DFGASKLVPIDAIQNCTVVQGTLGYLDPEY----LQTCKLTDKSDVYSFGVVLVEL 594
DFG S + D ++ G Y+ PE L + KSD++S G+ ++EL
Sbjct: 153 DFGISGYLVDDVAKDIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 407 DVIGCGGSGN-VYKGFLPDRTPVAVKKSKFVDQAKIDEFINELVVVLQIN--RRNVVRLL 463
DV+G G G VY+G +R VAVK+ + F + V +L+ + NV+R
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRD-VAVKRI----LPECFSFADREVQLLRESDEHPNVIRYF 84
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKK--GNLSWERRLRITAETAGVLSYLHSETNVPI 521
+ Q + E TL E++ +K +L E + T+G L++LHS + I
Sbjct: 85 CTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSG-LAHLHS---LNI 139
Query: 522 IHRDVKSANILLD-ENCTPK----VSDFGASKLVPI--DAIQNCTVVQGTLGYLDPEYL- 573
+HRD+K NIL+ N K +SDFG K + + + + V GT G++ PE L
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199
Query: 574 QTCK--LTDKSDVYSFGVVLVELLT 596
+ CK T D++S G V +++
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNC---------TVVQGTLGYLDPE 571
+IHRD+K +N+L++ NC KV DFG ++++ A N T T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 572 -YLQTCKLTDKSDVYSFGVVLVELL 595
L + K + DV+S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ D + T Y
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMXGXV---ATRWYRA 210
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 399 KTVTNNYADV--IGCGGSGNVYKGFLPDRTPVAVKK-SKFVDQAKIDEFINELVVVLQIN 455
+TV A V +G G G V++G + VAVK S +Q+ E E+ + +
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLWHGES-VAVKIFSSRDEQSWFRE--TEIYNTVLLR 60
Query: 456 RRNVVRLLGCCL-----ETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVL 510
N++ + + TQ+ L+ + + +G+L++ + ++ L LR+ A L
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITH-YHEHGSLYDFLQRQ-TLEPHLALRLAVSAACGL 118
Query: 511 SYLHSET-----NVPIIHRDVKSANILLDENCTPKVSDFGASKLVP-----IDAIQNCTV 560
++LH E I HRD KS N+L+ N ++D G + + +D N V
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 561 VQGTLGYLDPEYLQTCKLTD------KSDVYSFGVVLVEL 594
GT Y+ PE L TD +D+++FG+VL E+
Sbjct: 179 --GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNC---------TVVQGTLGYLDPE 571
+IHRD+K +N+L++ NC KV DFG ++++ A N T T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 572 -YLQTCKLTDKSDVYSFGVVLVELL 595
L + K + DV+S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ D+G ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ T Y
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWYRA 186
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG-----TLGYLDPEYLQTC 576
IHRD+ + NILL EN K+ DFG ++ D +N V+ L ++ PE +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLAR----DIYKNPDYVRKGDTRLPLKWMAPESIFDK 276
Query: 577 KLTDKSDVYSFGVVLVELLT 596
+ KSDV+S+GV+L E+ +
Sbjct: 277 IYSTKSDVWSYGVLLWEIFS 296
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DFG ++ D + T Y
Sbjct: 161 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMXGYV---ATRWYRA 213
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 458 NVVRLLGCCL------ETQVPLLVYEFVGNG--TLFEHIHKKGNLSWERRLRITAETAGV 509
NVVRL C ET++ LV+E V T + + + G + E + +
Sbjct: 75 NVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRG 132
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L +LHS ++HRD+K NIL+ + K++DFG +++ VV TL Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRA 187
Query: 570 PEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G + E+ K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 396 EEIKTVTNNYADVIGCGGSGNVYKGFLPDRTPVAVKKSKF---VDQAKIDEF-INELVVV 451
EE+ T+ +G G G V++ + K++ F V + +++ F EL+
Sbjct: 71 EEVHWATHQLR--LGRGSFGEVHR--------MEDKQTGFQCAVKKVRLEVFRAEELMAC 120
Query: 452 LQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS 511
+ +V L G E + E + G+L + + ++G L +R L + L
Sbjct: 121 AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLE 180
Query: 512 YLHSETNVPIIHRDVKSANILLDENCT-PKVSDFGASKLVPIDAIQNCTV----VQGTLG 566
YLHS I+H DVK+ N+LL + + + DFG + + D + + + GT
Sbjct: 181 YLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET 237
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTG 597
++ PE + K DV+S +++ +L G
Sbjct: 238 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+ ++ DFG ++ A + T T Y
Sbjct: 144 LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRA 196
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELL GK
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 409 IGCGGSGNVYKGFLPDRTP---VAVKKSKFVD--QAKIDEFINELVVVLQINRRNVVRLL 463
IG G G V+K +R VA+K+ + D + + E+ ++ ++ +N+VRL
Sbjct: 10 IGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIH 523
+ LV+EF G+L E + L + HS ++H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLH 124
Query: 524 RDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDK 581
RD+K N+L++ N K+++FG ++ +P+ V TL Y P+ L KL
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV---TLWYRPPDVLFGAKLYST 181
Query: 582 S-DVYSFGVVLVELLTGKMALL 602
S D++S G + EL L
Sbjct: 182 SIDMWSAGCIFAELANAGRPLF 203
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 40/255 (15%)
Query: 424 DRTPVAVK---KSKFVDQAKID---EFINELVVVLQINR--RNVVRLLGCCLETQVPLLV 475
D PVA+K K + D ++ E+V++ +++ V+RLL +L+
Sbjct: 75 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 134
Query: 476 YEFVGN-GTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLD 534
E LF+ I ++G L E + + + H N ++HRD+K NIL+D
Sbjct: 135 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILID 191
Query: 535 ENCTP-KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKS-DVYSFGVVLV 592
N K+ DFG+ L+ D + T GT Y PE+++ + +S V+S G++L
Sbjct: 192 LNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 248
Query: 593 ELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARC 652
+++ G + D+ EI+ ++ ++ E L C
Sbjct: 249 DMVCGDIPFEHDE---------------------EIIRGQVFF--RQRVSSECQHLIRWC 285
Query: 653 ISVRGEERPTMKEVS 667
+++R +RPT +E+
Sbjct: 286 LALRPSDRPTFEEIQ 300
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 458 NVVRLLGCCL------ETQVPLLVYEFVGNG--TLFEHIHKKGNLSWERRLRITAETAGV 509
NVVRL C ET++ LV+E V T + + + G + E + +
Sbjct: 75 NVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRG 132
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L +LHS ++HRD+K NIL+ + K++DFG +++ VV TL Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRA 187
Query: 570 PEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G + E+ K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 458 NVVRLLGCCL------ETQVPLLVYEFVGNG--TLFEHIHKKGNLSWERRLRITAETAGV 509
NVVRL C ET++ LV+E V T + + + G + E + +
Sbjct: 75 NVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRG 132
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L +LHS ++HRD+K NIL+ + K++DFG +++ VV TL Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRA 187
Query: 570 PEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G + E+ K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 14 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 462 LLGCCLETQVPLLVYEFVGNG-TLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVP 520
LL LV+E V F + + L++ HS
Sbjct: 70 LLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L CK
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEILLGCKY 183
Query: 579 TDKS-DVYSFGVVLVELLTGKMALLSD 604
+ D++S G + E++T + D
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 509 VLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
L++LHS+ ++H DVK ANI L K+ DFG LV + V +G Y+
Sbjct: 169 ALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYM 223
Query: 569 DPEYLQTCKLTDKSDVYSFGVVLVEL 594
PE LQ T +DV+S G+ ++E+
Sbjct: 224 APELLQGSYGT-AADVFSLGLTILEV 248
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 15/232 (6%)
Query: 407 DVIGCGGSGNVYKGF--LPDRTPVAVKKSKFVDQAKID-EFINELVVVLQINRRNVVRLL 463
D +G G VYKG L D VA+K+ + + I E+ ++ + N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRI-TAETAGVLSYLHSETNVPII 522
+ LV+E++ + L +++ GN+ +++ + L+Y H + ++
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VL 122
Query: 523 HRDVKSANILLDENCTPKVSDFGA--SKLVPIDAIQNCTVVQGTLGYLDPE-YLQTCKLT 579
HRD+K N+L++E K++DFG +K +P N V TL Y P+ L + +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV---TLWYRPPDILLGSTDYS 179
Query: 580 DKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLEILDN 631
+ D++ G + E+ TG+ EE+ L + + IL N
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 521 IIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCT-------VVQ--GTLGYLDPE 571
+IHRD+K +N+L++ NC KV DFG ++++ A N +V+ T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 572 -YLQTCKLTDKSDVYSFGVVLVELLTGK 598
L + K + DV+S G +L EL +
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 404 NYADVI---GCGGSGNVYKGFLPDRTPVAVKKSKFVDQA-KIDEFI--NELVVVLQINRR 457
+Y D++ G G G V++ ++ V +KF++ +D++ NE+ ++ Q++
Sbjct: 51 DYYDILEELGSGAFGVVHRCV--EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHP 108
Query: 458 NVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKG-NLSWERRLRITAETAGVLSYLHSE 516
++ L + +L+ EF+ G LF+ I + +S + + L ++H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 517 TNVPIIHRDVKSANILLD--ENCTPKVSDFG-ASKLVPIDAIQNCTVVQGTLGYLDPEYL 573
+ I+H D+K NI+ + + + K+ DFG A+KL P + ++ V T + PE +
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK---VTTATAEFAAPEIV 222
Query: 574 QTCKLTDKSDVYSFGVVLVELLTG 597
+ +D+++ GV+ LL+G
Sbjct: 223 DREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFVD----QAKIDEFINELVVVLQINRRNVVRLLG 464
IG G VYKG L T V V + D +++ F E + + N+VR
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 465 CCLET----QVPLLVYEFVGNGTLFEHIHK------KGNLSWERRLRITAETAGVLSYLH 514
T + +LV E +GTL ++ + K SW R++ L +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH 146
Query: 515 SETNVPIIHRDVKSANILLD-ENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL 573
+ T PIIHRD+K NI + + K+ D G L + V GT + PE
Sbjct: 147 TRTP-PIIHRDLKCDNIFITGPTGSVKIGDLG---LATLKRASFAKAVIGTPEFXAPEXY 202
Query: 574 QTCKLTDKSDVYSFGVVLVELLTGK 598
+ K + DVY+FG +E T +
Sbjct: 203 EE-KYDESVDVYAFGXCXLEXATSE 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 434 KFVDQAKI--------DEFINELVVVLQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLF 485
K VD AK ++ E + + ++V LL + +V+EF+ L
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 114
Query: 486 EHIHKKGNLSWERRLRITA----ETAGVLSYLHSETNVPIIHRDVKSANILL--DENCTP 539
I K+ + + + + + L Y H IIHRDVK N+LL EN P
Sbjct: 115 FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAP 171
Query: 540 -KVSDFGASKLVPIDAIQNCTVVQGTLG---YLDPEYLQTCKLTDKSDVYSFGVVLVELL 595
K+ DFG V I ++ V G +G ++ PE ++ DV+ GV+L LL
Sbjct: 172 VKLGDFG----VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227
Query: 596 TG 597
+G
Sbjct: 228 SG 229
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 384 GQSSEKAKIFTEEEIKT---VTNNYADV--IGCGGSGNVYKGF-LPDRTPVAVKKSKFVD 437
G S E+ + +E KT V Y ++ +G G G+V F VAVKK
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 438 QAKID--EFINELVVVLQINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIH 489
Q+ I EL ++ + NV+ LL E LV +G +I
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIV 128
Query: 490 KKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKL 549
K L+ + + + L Y+HS IIHRD+K +N+ ++E+ K+ DFG ++
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR- 184
Query: 550 VPIDAIQNCTVVQGTLGYLDPE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
T T Y PE L D++S G ++ ELLTG+
Sbjct: 185 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ FG ++ T T Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+ K+ DFG ++ T T Y
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRA 192
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+ K+ DFG ++ T T Y
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRA 196
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ DF ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ D G ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ D G ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 510 LSYLHSETNVPIIHRDVKSANILL----DENCTPKVSDFGASKLV--PIDAIQNCTVVQG 563
+ YLH+ ++HRD+K ANIL+ E K++D G ++L P+ + + V
Sbjct: 141 IHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 197
Query: 564 TLGYLDPEYLQTCKLTDKS-DVYSFGVVLVELLTGK 598
T Y PE L + K+ D+++ G + ELLT +
Sbjct: 198 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+ K+ DFG ++ T T Y
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRA 195
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+ K+ DFG ++ T T Y
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRA 195
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+ K+ DFG ++ T T Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 433 SKFVDQAKIDE-FINELVVVLQINR-RNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHK 490
+KFV D+ + + + +L I R RN++ L + ++++EF+ +FE I+
Sbjct: 35 AKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT 94
Query: 491 KGNLSWERRL-RITAETAGVLSYLHSETNVPIIHRDVKSANILLD--ENCTPKVSDFG-A 546
ER + + L +LHS I H D++ NI+ + T K+ +FG A
Sbjct: 95 SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQA 151
Query: 547 SKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSD 604
+L P D N ++ Y PE Q ++ +D++S G ++ LL+G L++
Sbjct: 152 RQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 18 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 74 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 182
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
K + D++S G + E++T + D
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 409 IGCGGSGNVYKGFLPDRTP-----VAVKKSKFVDQAK--IDEFINELVVVLQINRRNVVR 461
IG G G VYK R VA+KK + + + I E+ ++ ++N N+V+
Sbjct: 11 IGEGTYGVVYKA----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 462 LLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGV------LSYLHS 515
LL LV+EF L + + K + S + + + + L++ HS
Sbjct: 67 LLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 516 ETNVPIIHRDVKSANILLDENCTPKVSDFGASKL--VPIDAIQNCTVVQGTLGYLDPEYL 573
++HRD+K N+L++ K++DFG ++ VP+ + V TL Y PE L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL 175
Query: 574 QTCKLTDKS-DVYSFGVVLVELLTGKMALLSD 604
K + D++S G + E++T + D
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 473 LLVYEFVGNGTLFEHIHKKGN-LSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANI 531
+++YEF+ G LFE + + N +S + + + L ++H E N +H D+K NI
Sbjct: 230 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-ENNY--VHLDLKPENI 286
Query: 532 LLDENCTP--KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGV 589
+ + K+ DFG + +D Q+ V GT + PE + + +D++S GV
Sbjct: 287 MFTTKRSNELKLIDFGLT--AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 344
Query: 590 VLVELLTG 597
+ LL+G
Sbjct: 345 LSYILLSG 352
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLD 569
L Y+HS IIHRD+K +N+ ++E+C K+ D G ++ T T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGYVATRWYRA 190
Query: 570 PE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
PE L D++S G ++ ELLTG+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 473 LLVYEFVGNGTLFEHIHKKGN-LSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANI 531
+++YEF+ G LFE + + N +S + + + L ++H E N +H D+K NI
Sbjct: 124 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-ENN--YVHLDLKPENI 180
Query: 532 LLDENCTP--KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGV 589
+ + K+ DFG + +D Q+ V GT + PE + + +D++S GV
Sbjct: 181 MFTTKRSNELKLIDFGLT--AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 238
Query: 590 VLVELLTG 597
+ LL+G
Sbjct: 239 LSYILLSG 246
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAV----KKSK-----FVDQAKIDEFINELVVVLQINRRNV 459
+G G G V+ ++ V KK K +++ K+ + E+ ++ ++ N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 460 VRLLGCCLETQVPLLVYEFVGNGT-LFEHIHKKGNLSWERRLRITAETAGVLSYLHSETN 518
+++L LV E G+G LF I + L I + + YL +
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD- 150
Query: 519 VPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKL 578
IIHRD+K NI++ E+ T K+ DFG++ ++ + GT+ Y PE L
Sbjct: 151 --IIHRDIKDENIVIAEDFTIKLIDFGSAAY--LERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 579 TDKS-DVYSFGVVLVELL 595
+++S GV L L+
Sbjct: 207 RGPELEMWSLGVTLYTLV 224
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 484 LFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSD 543
L + ++G L+ R + I + + S L + HRDVK NIL+ + + D
Sbjct: 121 LAAXLRRQGPLAPPRAVAIVRQ---IGSALDAAHAAGATHRDVKPENILVSADDFAYLVD 177
Query: 544 FGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLS 603
FG + + + GTL Y PE T ++D+Y+ VL E LTG
Sbjct: 178 FGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237
Query: 604 DK 605
D+
Sbjct: 238 DQ 239
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 408 VIGCGGSGNV-YKGFLPDRTPVAVKKS--KFVDQAKIDEFINELVVVLQINRR-NVVRLL 463
++G G SG V ++G R PVAVK+ F D A + E+ ++ + + NV+R
Sbjct: 40 ILGYGSSGTVVFQGSFQGR-PVAVKRMLIDFCDIA-----LMEIKLLTESDDHPNVIRYY 93
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKG----NLSWERR---LRITAETAGVLSYLHSE 516
C T L + + N L + + K NL ++ + + + A +++LHS
Sbjct: 94 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 151
Query: 517 TNVPIIHRDVKSANILLD-------------ENCTPKVSDFGASKLVPIDAIQ-----NC 558
+ IIHRD+K NIL+ EN +SDFG K +D+ Q N
Sbjct: 152 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNL 207
Query: 559 TVVQGTLGYLDPEYLQTC---KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
GT G+ PE L+ +LT D++S G V +L+ DK E ++
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 267
Query: 616 FLS 618
S
Sbjct: 268 IFS 270
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 408 VIGCGGSGNV-YKGFLPDRTPVAVKKS--KFVDQAKIDEFINELVVVLQINRR-NVVRLL 463
++G G SG V ++G R PVAVK+ F D A + E+ ++ + + NV+R
Sbjct: 40 ILGYGSSGTVVFQGSFQGR-PVAVKRMLIDFCDIA-----LMEIKLLTESDDHPNVIRYY 93
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKG----NLSWERR---LRITAETAGVLSYLHSE 516
C T L + + N L + + K NL ++ + + + A +++LHS
Sbjct: 94 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 151
Query: 517 TNVPIIHRDVKSANILLD-------------ENCTPKVSDFGASKLVPIDAIQ-----NC 558
+ IIHRD+K NIL+ EN +SDFG K +D+ Q N
Sbjct: 152 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNL 207
Query: 559 TVVQGTLGYLDPEYLQTC---KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMN 615
GT G+ PE L+ +LT D++S G V +L+ DK E ++
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 267
Query: 616 FLS 618
S
Sbjct: 268 IFS 270
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG-----TLGYLDPEYLQTC 576
IHRD+ + NILL E K+ DFG ++ D ++ V+ L ++ PE +
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDR 268
Query: 577 KLTDKSDVYSFGVVLVELLT 596
T +SDV+SFGV+L E+ +
Sbjct: 269 VYTIQSDVWSFGVLLWEIFS 288
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 461 RLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN 493
LLG C + PL+V EF G L ++ K N
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 121
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG-----TLGYLDPEYLQTC 576
IHRD+ + NILL E K+ DFG ++ D ++ V+ L ++ PE +
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDR 270
Query: 577 KLTDKSDVYSFGVVLVELLT 596
T +SDV+SFGV+L E+ +
Sbjct: 271 VYTIQSDVWSFGVLLWEIFS 290
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 461 RLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN 493
LLG C + PL+V EF G L ++ K N
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 123
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 24/228 (10%)
Query: 386 SSEKAKIFTEEEIKT---VTNNYADV--IGCGGSGNVYKGF-LPDRTPVAVKKSKFVDQA 439
S E+ + +E KT V Y ++ +G G G+V F VAVKK Q+
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 440 KID--EFINELVVVLQINRRNVVRLLGCCL------ETQVPLLVYEFVGNGTLFEHIHKK 491
I EL ++ + NV+ LL E LV +G +I K
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKS 119
Query: 492 GNLSWERRLRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVSDFGASKLVP 551
L+ + + + L Y+HS IIHRD+K +N+ ++E+ K+ DFG +
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR--- 173
Query: 552 IDAIQNCTVVQGTLGYLDPE-YLQTCKLTDKSDVYSFGVVLVELLTGK 598
T T Y PE L D++S G ++ ELLTG+
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 500 LRITAETAGVLSYLHSET-----NVPIIHRDVKSANILLDENCTPKVSDFGASKLVP--- 551
LRI A L++LH E I HRD+KS NIL+ +N ++D G + +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 552 --IDAIQNCTVVQGTLGYLDPEYLQTCKLTD------KSDVYSFGVVLVEL 594
+D N V GT Y+ PE L D + D+++FG+VL E+
Sbjct: 168 NQLDVGNNPRV--GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG-----TLGYLDPEYLQTC 576
IHRD+ + NILL E K+ DFG ++ D ++ V+ L ++ PE +
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDR 275
Query: 577 KLTDKSDVYSFGVVLVELLT 596
T +SDV+SFGV+L E+ +
Sbjct: 276 VYTIQSDVWSFGVLLWEIFS 295
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 461 RLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN 493
LLG C + PL+V EF G L ++ K N
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 128
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 470 QVPLLVYEFVGNGTLFEHIHK---KGNLSWERRLRITAETAGVLSYLHSETNVPIIHRDV 526
Q L+ + G L E + K +G LS + L+I +T + ++H + PIIHRD+
Sbjct: 106 QAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDL 164
Query: 527 KSANILLDENCTPKVSDFGAS----------------KLVPIDAIQNCTVVQGTLGYLDP 570
K N+LL T K+ DFG++ LV + +N T + T +D
Sbjct: 165 KVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID- 223
Query: 571 EYLQTCKLTDKSDVYSFGVVL 591
+ +K D+++ G +L
Sbjct: 224 -LYSNFPIGEKQDIWALGCIL 243
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 522 IHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQG-----TLGYLDPEYLQTC 576
IHRD+ + NILL E K+ DFG ++ D ++ V+ L ++ PE +
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDR 277
Query: 577 KLTDKSDVYSFGVVLVELLT 596
T +SDV+SFGV+L E+ +
Sbjct: 278 VYTIQSDVWSFGVLLWEIFS 297
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 409 IGCGGSGNVYKG--FLPDRTP----VAVKKSK-FVDQAKIDEFINELVVVLQINRR-NVV 460
+G G G V + F D+T VAVK K ++ ++EL +++ I NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 461 RLLGCCLETQVPLLV-YEFVGNGTLFEHIHKKGN 493
LLG C + PL+V EF G L ++ K N
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 130
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 500 LRITAETAGVLSYLHSET-----NVPIIHRDVKSANILLDENCTPKVSDFGASKLVP--- 551
LRI A L++LH E I HRD+KS NIL+ +N ++D G + +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 552 --IDAIQNCTVVQGTLGYLDPEYLQTCKLTD------KSDVYSFGVVLVEL 594
+D N V GT Y+ PE L D + D+++FG+VL E+
Sbjct: 168 NQLDVGNNPRV--GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 484 LFEHIHKKGNLSWERRL-RITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTPKVS 542
++ + KG E L +I L +LHS+ +V IHRDVK +N+L++ K
Sbjct: 122 FYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKXC 179
Query: 543 DFGASKLVPIDAIQNCTVVQGTLGYLDPEY----LQTCKLTDKSDVYSFGVVLVEL 594
DFG S + D ++ G Y PE L + KSD++S G+ +EL
Sbjct: 180 DFGISGYLVDDVAKDIDA--GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVVRLLGCC 466
IG G G VYK A+KK + D+ I E+ ++ ++ N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 467 LETQVPLLVYEFVGNGTLFEHIHK---------KGNLSWERRLRITAETAGVLSYLHSET 517
+ +LV FEH+ + +G L + ++Y H
Sbjct: 70 HTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 518 NVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ-TC 576
++HRD+K N+L++ K++DFG ++ I ++ T TL Y P+ L +
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 577 KLTDKSDVYSFGVVLVELLTG 597
K + D++S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVVRLLGCC 466
IG G G VYK A+KK + D+ I E+ ++ ++ N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 467 LETQVPLLVYEFVGNGTLFEHIHK---------KGNLSWERRLRITAETAGVLSYLHSET 517
+ +LV FEH+ + +G L + ++Y H
Sbjct: 70 HTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 518 NVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ-TC 576
++HRD+K N+L++ K++DFG ++ I ++ T TL Y P+ L +
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 577 KLTDKSDVYSFGVVLVELLTG 597
K + D++S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 500 LRITAETAGVLSYLHSET-----NVPIIHRDVKSANILLDENCTPKVSDFGASKLVP--- 551
LRI A L++LH E I HRD+KS NIL+ +N ++D G + +
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 552 --IDAIQNCTVVQGTLGYLDPEYLQTCKLTD------KSDVYSFGVVLVEL 594
+D N V GT Y+ PE L D + D+++FG+VL E+
Sbjct: 197 NQLDVGNNPRV--GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 409 IGCGGSGNVYKGF--LPDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVVRLLG 464
+G G G VYK + + T VA+K+ + ++ I E+ ++ ++ RN++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNET-VAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 465 CCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLSYLHSETNVPIIHR 524
L++E+ N L +++ K ++S + +++ HS +HR
Sbjct: 101 VIHHNHRLHLIFEYAEND-LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHR 156
Query: 525 DVKSANILL---DENCTP--KVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLT 579
D+K N+LL D + TP K+ DFG ++ I I+ T TL Y PE L +
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PIRQFTHEIITLWYRPPEILLGSRHY 215
Query: 580 DKS-DVYSFGVVLVELL 595
S D++S + E+L
Sbjct: 216 STSVDIWSIACIWAEML 232
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 409 IGCGGSGNVYKGFLPDRTPVAVKKSKFV--DQAKIDEFINELVVVLQINRRNVVRLLGCC 466
IG G G VYK A+KK + D+ I E+ ++ ++ N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 467 LETQVPLLVYEFVGNGTLFEHIHK---------KGNLSWERRLRITAETAGVLSYLHSET 517
+ +LV FEH+ + +G L + ++Y H
Sbjct: 70 HTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 518 NVPIIHRDVKSANILLDENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQ-TC 576
++HRD+K N+L++ K++DFG ++ I ++ T TL Y P+ L +
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 577 KLTDKSDVYSFGVVLVELLTG 597
K + D++S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 59/295 (20%)
Query: 408 VIGCGGSGNV-YKGFLPDRTPVAVKKS--KFVDQAKIDEFINELVVVLQINRR-NVVRLL 463
++G G SG V ++G R PVAVK+ F D A + E+ ++ + + NV+R
Sbjct: 22 ILGYGSSGTVVFQGSFQGR-PVAVKRMLIDFCDIA-----LMEIKLLTESDDHPNVIRYY 75
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKG----NLSWERR---LRITAETAGVLSYLHSE 516
C T L + + N L + + K NL ++ + + + A +++LHS
Sbjct: 76 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 133
Query: 517 TNVPIIHRDVKSANILLD-------------ENCTPKVSDFGASKLVPIDAIQ-----NC 558
+ IIHRD+K NIL+ EN +SDFG K +D+ Q N
Sbjct: 134 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQSSFRTNL 189
Query: 559 TVVQGTLGYLDPEYLQTC-------KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERS 611
GT G+ PE L+ +LT D++S G V +L+ DK E +
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 249
Query: 612 LAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
+ SL + + L ++ + E L ++ I +RPT +V
Sbjct: 250 IIRGIF-SLDEMKCLH----------DRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 59/295 (20%)
Query: 408 VIGCGGSGNV-YKGFLPDRTPVAVKKS--KFVDQAKIDEFINELVVVLQINRR-NVVRLL 463
++G G SG V ++G R PVAVK+ F D A + E+ ++ + + NV+R
Sbjct: 22 ILGYGSSGTVVFQGSFQGR-PVAVKRMLIDFCDIA-----LMEIKLLTESDDHPNVIRYY 75
Query: 464 GCCLETQVPLLVYEFVGNGTLFEHIHKKG----NLSWERR---LRITAETAGVLSYLHSE 516
C T L + + N L + + K NL ++ + + + A +++LHS
Sbjct: 76 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 133
Query: 517 TNVPIIHRDVKSANILLD-------------ENCTPKVSDFGASKLVPIDAIQ-----NC 558
+ IIHRD+K NIL+ EN +SDFG K +D+ Q N
Sbjct: 134 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNL 189
Query: 559 TVVQGTLGYLDPEYLQTC-------KLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERS 611
GT G+ PE L+ +LT D++S G V +L+ DK E +
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 249
Query: 612 LAMNFLSSLKQNRLLEILDNRIVNDGNKQQLKEVAKLAARCISVRGEERPTMKEV 666
+ SL + + L ++ + E L ++ I +RPT +V
Sbjct: 250 IIRGIF-SLDEMKCLH----------DRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 18/192 (9%)
Query: 371 GGSILRQELSKLHGQSSEKAKIFTEEEIKTVTNNYA--DVIGCGGSGNVYKGF--LPDRT 426
GS + K H S A + + + Y +IG G G+V + + L R
Sbjct: 21 SGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRV 80
Query: 427 PVAVKKSKFVDQAKID--EFINELVVVLQINRRNVVRLLGCCLETQVP-----LLVYEFV 479
VA+KK V + ID + E+ ++ ++N +VV++L + V +V E
Sbjct: 81 -VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA 139
Query: 480 GNGTLFEHIHKKGNLSWERRLRITAETAGV-LSYLHSETNVPIIHRDVKSANILLDENCT 538
+ F+ + + E ++ V + Y+HS I+HRD+K AN L++++C+
Sbjct: 140 DSD--FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCS 194
Query: 539 PKVSDFGASKLV 550
KV DFG ++ V
Sbjct: 195 VKVCDFGLARTV 206
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 443 EFINELVVVLQINRR--NVVRLLGCCLETQVPLLVYEFVGNGTLFEH-IHKKGNLSWERR 499
E ++E + VL++ + V+ L T +L+ E+ G +F + + + E
Sbjct: 74 EILHE-IAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEND 132
Query: 500 -LRITAETAGVLSYLHSETNVPIIHRDVKSANILLDENCTP----KVSDFGASKLVPIDA 554
+R+ + + YLH I+H D+K NILL + P K+ DFG S+ +
Sbjct: 133 VIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSRKIG--- 185
Query: 555 IQNCTV--VQGTLGYLDPEYLQTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEE 608
C + + GT YL PE L +T +D+++ G++ LLT + + +E
Sbjct: 186 -HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 31/130 (23%)
Query: 473 LLVYEFVGNGTLFEHIHKKGNLSWERR--LRITAETAGVLSYLHSETNVPIIHRDVKSAN 530
L+V E + G LF I +G+ ++ R I + YLHS + I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 147
Query: 531 ILLDE---NCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYLQTCKLTDKSDVYSF 587
+L N K++DFG +K T G +Y ++C D++S
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK--------------ETTG---EKYDKSC------DMWSL 184
Query: 588 GVVLVELLTG 597
GV++ LL G
Sbjct: 185 GVIMYILLCG 194
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 96/222 (43%), Gaps = 37/222 (16%)
Query: 404 NYAD--VIGCGGSGNVYKGFLPDRTP-VAVKKSKFVDQAKIDEFIN-ELVVVLQINRRNV 459
+Y D VIG G G VY+ L D VA+KK V Q K F N EL ++ +++ N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGK--AFKNRELQIMRKLDHCNI 75
Query: 460 VRL---------------LGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITA 504
VRL L L+ VP VY + + K L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLD-YVPATVYRVARH-----YSRAKQTLPVIYVKLYMY 129
Query: 505 ETAGVLSYLHSETNVPIIHRDVKSANILLD-ENCTPKVSDFGASKLVPIDAIQNCTVVQG 563
+ L+Y+HS I HRD+K N+LLD + K+ DFG++K + + N + +
Sbjct: 130 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 564 TLGYLDPEYL-QTCKLTDKSDVYSFGVVLVELLTGKMALLSD 604
Y PE + T DV+S G VL ELL G+ D
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 38/212 (17%)
Query: 408 VIGCGGSGNVYKGFLPDRTP---VAVK----KSKFVDQAKIDEFINELV---------VV 451
+IG G G V K + DR VA+K K F++QA+I+ + EL+ +
Sbjct: 61 LIGKGSFGQVVKAY--DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYI 118
Query: 452 LQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS 511
+ + R + R C + + +Y+ + N T F + +L+ R+ TA L
Sbjct: 119 VHLKRHFMFRNHLCLVFEMLSYNLYDLLRN-TNFRGV----SLNLTRKFAQQMCTA--LL 171
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPKVS-----DFGASKLVPIDAIQNCTVVQGTLG 566
+L + + IIH D+K NILL C PK S DFG+S + Q +Q
Sbjct: 172 FL-ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQX---IQSRF- 223
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
Y PE L D++S G +LVE+ TG+
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 510 LSYLHSETNVPIIHRDVKSANILLD-ENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYL 568
L+Y+HS I HRD+K N+LLD + K+ DFG++K + + N + + Y
Sbjct: 214 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSRY-YR 268
Query: 569 DPEYL-QTCKLTDKSDVYSFGVVLVELLTGKMALLSDKPEEERSLAMNFLSSLKQNRLLE 627
PE + T DV+S G VL ELL G+ D ++ + L + + ++ E
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 328
Query: 628 ILDN 631
+ N
Sbjct: 329 MNPN 332
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 38/212 (17%)
Query: 408 VIGCGGSGNVYKGFLPDRTP---VAVK----KSKFVDQAKIDEFINELV---------VV 451
+IG G G V K + DR VA+K K F++QA+I+ + EL+ +
Sbjct: 61 LIGKGSFGQVVKAY--DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYI 118
Query: 452 LQINRRNVVRLLGCCLETQVPLLVYEFVGNGTLFEHIHKKGNLSWERRLRITAETAGVLS 511
+ + R + R C + + +Y+ + N T F + +L+ R+ TA L
Sbjct: 119 VHLKRHFMFRNHLCLVFEMLSYNLYDLLRN-TNFRGV----SLNLTRKFAQQMCTA--LL 171
Query: 512 YLHSETNVPIIHRDVKSANILLDENCTPK-----VSDFGASKLVPIDAIQNCTVVQGTLG 566
+L + + IIH D+K NILL C PK + DFG+S + Q +Q
Sbjct: 172 FL-ATPELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQRIYQX---IQSRF- 223
Query: 567 YLDPEYLQTCKLTDKSDVYSFGVVLVELLTGK 598
Y PE L D++S G +LVE+ TG+
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 408 VIGCGGSGNVYKGFLPDRTPVAVKKSKFVDQAKIDEFIN-ELVVVLQINRRNVVRLLGCC 466
VIG G G V++ L + VA+KK V Q K F N EL ++ + NVV L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKK---VLQDK--RFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 467 L-----ETQVPL-LVYEFVGNGTLFEHIHKKGNLSWERRLRITA----ETAGVLSYLHSE 516
+ +V L LV E+V T++ L + + + L+Y+HS
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS- 159
Query: 517 TNVPIIHRDVKSANILLD-ENCTPKVSDFGASKLVPIDAIQNCTVVQGTLGYLDPEYL-Q 574
+ I HRD+K N+LLD + K+ DFG++K++ I N + + Y PE +
Sbjct: 160 --IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSXICSRY-YRAPELIFG 215
Query: 575 TCKLTDKSDVYSFGVVLVELLTGK 598
T D++S G V+ EL+ G+
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQ 239
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,606,319
Number of Sequences: 62578
Number of extensions: 908474
Number of successful extensions: 4712
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 2263
Number of HSP's gapped (non-prelim): 1229
length of query: 735
length of database: 14,973,337
effective HSP length: 106
effective length of query: 629
effective length of database: 8,340,069
effective search space: 5245903401
effective search space used: 5245903401
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)