Query 004713
Match_columns 734
No_of_seqs 398 out of 2188
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 03:26:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004713.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004713hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fbw_A DNA repair protein RAD3 100.0 3.8E-81 1.3E-85 689.8 37.6 391 6-405 7-410 (417)
2 4fbk_A DNA repair and telomere 100.0 1.2E-80 4.2E-85 691.9 40.8 389 7-404 71-472 (472)
3 3t1i_A Double-strand break rep 100.0 9.6E-80 3.3E-84 681.1 38.6 393 5-406 25-424 (431)
4 1ii7_A MRE11 nuclease; RAD50, 100.0 2E-33 6.7E-38 299.4 28.2 293 13-385 1-319 (333)
5 3av0_A DNA double-strand break 100.0 2.3E-32 7.9E-37 297.5 34.0 278 8-371 16-301 (386)
6 2q8u_A Exonuclease, putative; 100.0 9E-31 3.1E-35 278.6 26.4 259 9-321 15-290 (336)
7 3tho_B Exonuclease, putative; 100.0 1.5E-30 5.1E-35 283.2 26.3 250 13-320 1-271 (379)
8 3d03_A Phosphohydrolase; glyce 99.8 1.7E-19 5.8E-24 183.0 13.3 242 13-316 1-264 (274)
9 3ib7_A ICC protein; metallopho 99.8 7.9E-19 2.7E-23 183.1 17.3 243 8-313 21-282 (330)
10 1uf3_A Hypothetical protein TT 99.8 4.3E-18 1.5E-22 167.7 14.9 203 11-309 4-227 (228)
11 2yvt_A Hypothetical protein AQ 99.7 2.4E-17 8.3E-22 166.7 14.8 44 11-66 4-47 (260)
12 1z2w_A Vacuolar protein sortin 99.7 2.2E-16 7.4E-21 155.4 13.4 73 244-322 116-189 (192)
13 2a22_A Vacuolar protein sortin 99.7 8.2E-16 2.8E-20 154.4 15.6 99 217-321 112-212 (215)
14 2xmo_A LMO2642 protein; phosph 99.7 2.2E-15 7.5E-20 165.2 18.9 248 8-310 35-333 (443)
15 2kkn_A Uncharacterized protein 99.6 4.6E-15 1.6E-19 145.5 11.8 52 244-309 127-178 (178)
16 1s3l_A Hypothetical protein MJ 99.6 1.8E-14 6.1E-19 142.6 12.5 163 11-304 24-187 (190)
17 2nxf_A Putative dimetal phosph 99.6 6.2E-14 2.1E-18 144.2 17.1 87 10-131 3-100 (322)
18 1ute_A Protein (II purple acid 99.5 4.4E-13 1.5E-17 137.5 17.3 254 9-319 3-299 (313)
19 1su1_A Hypothetical protein YF 99.4 2.1E-12 7.3E-17 129.1 17.5 178 10-319 23-204 (208)
20 3qfm_A SAPH, putative uncharac 99.4 2.3E-12 8E-17 134.0 16.0 214 1-309 1-229 (270)
21 3ck2_A Conserved uncharacteriz 99.4 1.2E-12 4.3E-17 126.7 11.5 89 219-316 78-168 (176)
22 1nnw_A Hypothetical protein; s 99.4 3.4E-12 1.2E-16 129.2 13.4 71 12-131 1-76 (252)
23 3rl5_A Metallophosphoesterase 99.3 1.7E-11 5.7E-16 130.0 14.0 187 8-278 55-276 (296)
24 3rqz_A Metallophosphoesterase; 99.2 1.8E-11 6E-16 124.7 10.9 54 11-82 2-55 (246)
25 3tgh_A Glideosome-associated p 99.2 7E-11 2.4E-15 127.4 13.3 262 11-321 2-305 (342)
26 1xm7_A Hypothetical protein AQ 99.2 3.1E-11 1.1E-15 118.5 8.0 81 12-131 1-84 (195)
27 1xzw_A Purple acid phosphatase 99.0 1.1E-08 3.7E-13 112.1 18.7 78 9-132 123-205 (426)
28 2qfp_A Purple acid phosphatase 99.0 6.2E-09 2.1E-13 113.9 15.8 78 9-132 116-198 (424)
29 1hp1_A 5'-nucleotidase; metall 98.8 2.5E-08 8.6E-13 112.3 15.1 205 9-259 5-233 (516)
30 3ive_A Nucleotidase; structura 98.8 1.5E-08 5.1E-13 114.2 12.4 217 11-276 5-254 (509)
31 2wdc_A SOXB, sulfur oxidation 98.8 3.5E-08 1.2E-12 112.9 13.7 186 38-276 105-307 (562)
32 2z1a_A 5'-nucleotidase; metal- 98.8 2.4E-08 8.3E-13 113.6 12.2 201 9-259 26-244 (552)
33 3qfk_A Uncharacterized protein 98.6 2.5E-07 8.4E-12 104.7 14.5 218 9-276 16-266 (527)
34 4h2g_A 5'-nucleotidase; dimer, 98.5 2E-07 6.9E-12 106.0 11.0 58 8-65 21-87 (546)
35 3ztv_A NAD nucleotidase, NADN; 98.5 2.3E-07 7.9E-12 106.3 9.2 57 9-65 9-75 (579)
36 3jyf_A 2',3'-cyclic nucleotide 98.5 4.5E-06 1.6E-10 89.8 18.5 55 11-65 7-66 (339)
37 3gve_A YFKN protein; alpha-bet 98.4 3.6E-06 1.2E-10 90.6 15.6 57 9-65 8-69 (341)
38 1g5b_A Serine/threonine protei 98.0 2E-06 6.8E-11 85.8 2.4 46 9-66 9-55 (221)
39 3c9f_A 5'-nucleotidase; 2',3'- 97.9 1.3E-05 4.4E-10 91.7 8.5 60 5-64 8-73 (557)
40 2qjc_A Diadenosine tetraphosph 97.8 1E-05 3.5E-10 83.5 4.9 43 13-67 19-62 (262)
41 1t71_A Phosphatase, conserved 97.8 0.00028 9.6E-09 74.2 14.2 191 11-273 3-203 (281)
42 2dfj_A Diadenosinetetraphospha 97.7 1.7E-05 5.9E-10 83.0 4.5 68 13-131 1-69 (280)
43 4h1s_A 5'-nucleotidase; hydrol 97.7 0.00012 4.1E-09 82.7 11.3 54 12-65 3-65 (530)
44 1t70_A Phosphatase; crystal, X 97.5 0.00055 1.9E-08 71.1 11.3 185 13-273 1-193 (255)
45 3e0j_A DNA polymerase subunit 97.4 0.00099 3.4E-08 74.7 13.6 53 10-65 198-258 (476)
46 2z72_A Protein-tyrosine-phosph 97.3 0.00018 6.2E-09 77.2 6.2 77 11-131 69-153 (342)
47 2z06_A Putative uncharacterize 97.2 0.0038 1.3E-07 64.7 13.9 182 13-273 1-190 (252)
48 2ie4_C PP2A-alpha;, serine/thr 97.0 0.00089 3E-08 71.2 7.4 73 13-132 50-122 (309)
49 1wao_1 Serine/threonine protei 97.0 0.0012 4.2E-08 73.1 8.1 74 11-131 211-285 (477)
50 1fjm_A Protein serine/threonin 96.8 0.0015 5.1E-08 70.2 7.3 72 13-131 57-128 (330)
51 3h63_A Serine/threonine-protei 96.7 0.0031 1.1E-07 67.4 8.5 50 10-71 57-107 (315)
52 3e7a_A PP-1A, serine/threonine 96.6 0.0027 9.1E-08 67.4 7.3 47 13-71 56-102 (299)
53 3icf_A PPT, serine/threonine-p 96.6 0.004 1.4E-07 67.0 8.6 50 11-72 62-112 (335)
54 1aui_A Calcineurin, serine/thr 96.4 0.0042 1.4E-07 70.2 7.3 72 13-131 83-154 (521)
55 3ll8_A Serine/threonine-protei 96.4 0.0046 1.6E-07 67.1 7.3 47 13-71 70-116 (357)
56 2yeq_A Apased, PHOD, alkaline 95.0 0.03 1E-06 63.4 7.0 44 10-66 114-157 (527)
57 3flo_A DNA polymerase alpha su 93.0 0.17 5.9E-06 56.5 7.9 51 10-67 145-196 (460)
58 1b34_A Protein (small nuclear 90.0 0.058 2E-06 49.7 0.0 14 585-598 102-115 (119)
59 1b34_A Protein (small nuclear 85.3 0.16 5.6E-06 46.6 0.0 16 584-599 97-112 (119)
60 3tnj_A Universal stress protei 46.7 34 0.0012 30.3 6.2 19 40-58 98-116 (150)
61 1g5b_A Serine/threonine protei 41.1 9.3 0.00032 37.3 1.6 31 244-278 177-207 (221)
62 3w01_A Heptaprenylglyceryl pho 40.8 46 0.0016 33.9 6.7 14 46-59 31-44 (235)
63 1mjh_A Protein (ATP-binding do 40.0 61 0.0021 29.1 6.9 12 117-128 150-161 (162)
64 1jmv_A USPA, universal stress 36.6 51 0.0018 28.8 5.7 21 40-60 91-111 (141)
65 3vzx_A Heptaprenylglyceryl pho 34.5 43 0.0015 33.9 5.3 15 45-59 25-39 (228)
66 3fdx_A Putative filament prote 32.9 61 0.0021 28.2 5.5 21 39-59 94-114 (143)
67 2dum_A Hypothetical protein PH 31.7 92 0.0031 28.2 6.7 16 116-131 146-161 (170)
68 2pjk_A 178AA long hypothetical 30.4 74 0.0025 30.6 6.0 28 34-61 63-91 (178)
69 3hdg_A Uncharacterized protein 25.6 1.8E+02 0.0062 24.6 7.2 54 10-63 5-63 (137)
70 3j21_Z 50S ribosomal protein L 25.0 84 0.0029 27.2 4.8 21 40-60 20-40 (99)
71 3cpq_A 50S ribosomal protein L 24.5 65 0.0022 28.5 4.1 22 40-61 26-47 (110)
72 3cqj_A L-ribulose-5-phosphate 24.5 2.6E+02 0.0089 27.7 9.1 71 12-83 79-153 (295)
73 3s3t_A Nucleotide-binding prot 24.1 1.1E+02 0.0038 26.6 5.7 9 117-125 138-146 (146)
74 3pzy_A MOG; ssgcid, seattle st 22.4 1.8E+02 0.0062 27.4 7.0 24 38-61 53-76 (164)
75 2xzm_U Ribosomal protein L7AE 22.2 1.5E+02 0.0052 27.0 6.2 23 41-63 30-52 (126)
76 1qv9_A F420-dependent methylen 22.0 4.6E+02 0.016 27.0 10.0 62 6-80 27-88 (283)
77 3hv2_A Response regulator/HD d 21.9 2.5E+02 0.0087 24.3 7.6 57 6-63 8-70 (153)
78 3cz5_A Two-component response 21.1 2.7E+02 0.0093 24.1 7.6 53 11-63 4-63 (153)
79 3men_A Acetylpolyamine aminohy 20.7 1.9E+02 0.0064 31.3 7.4 47 34-80 274-327 (362)
80 3ngf_A AP endonuclease, family 20.4 1.2E+02 0.0042 29.8 5.7 53 29-83 84-137 (269)
81 4e7p_A Response regulator; DNA 20.1 2.3E+02 0.0079 24.5 6.9 56 8-63 16-78 (150)
No 1
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=100.00 E-value=3.8e-81 Score=689.76 Aligned_cols=391 Identities=45% Similarity=0.817 Sum_probs=336.1
Q ss_pred CCCCCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccC
Q 004713 6 REDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLN 85 (734)
Q Consensus 6 ~~~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~g 85 (734)
...+.++|||||+||+|||+...+..++.+.+.+|+++++.|.+++||+||++|||||...|+..++..+++.|++||+|
T Consensus 7 ~~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g 86 (417)
T 4fbw_A 7 ELHNENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLG 86 (417)
T ss_dssp ---CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBS
T ss_pred CCCCCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhccc
Confidence 34567899999999999999988888899999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeechhhhhc-ccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccc
Q 004713 86 DRPVQFQVVSDQAVNF-QNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGE 164 (734)
Q Consensus 86 d~p~~~e~lSd~~~~F-~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~ 164 (734)
|+||+||+|||++.+| .+.|.+|||+|||++++||||+|+||||.+.+.+..+++++|..+|++++||... ..++
T Consensus 87 ~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~----~~~~ 162 (417)
T 4fbw_A 87 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVP----ENDN 162 (417)
T ss_dssp SCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC-------C
T ss_pred CCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcc----cCCc
Confidence 9999999999999999 5789999999999999999999999999998877678999999999999999853 3467
Q ss_pred eeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccccCCc
Q 004713 165 ITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR 244 (734)
Q Consensus 165 i~v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~ 244 (734)
+.+.|+++++|.++++|||+||++++++.+.+.+ ..+.++.|... ..+||||+|+||++.++++.+++++.+++.
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~~d~rl~r~~~~-~~v~~~~p~~~----~~~~~nIlvlH~~~~~~~~~~yip~~l~~~ 237 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNVRDERLYHSFRE-NKVKFLRPDLY----RDEWFNLLTVHQNHSAHTPTSYLPESFIQD 237 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCCCHHHHHHHHHT-TCEEEEEESTT----TTTSEEEEEEESCSSCSSSSSSCCGGGSCT
T ss_pred eeEEeEEEEecCceEEEEeccCCchhhhhhhhhh-hhhhhcCcccc----cCCceEEEEecCCccCCCCcccCchhHhhc
Confidence 8899999999999999999999999999888876 45777766421 368999999999999887788999999999
Q ss_pred CCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEecc
Q 004713 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILKD 324 (734)
Q Consensus 245 ~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~~~~~e~IpL~tvRpf~~~eI~L~~ 324 (734)
++|||||||+|.+++.+...+..+++++||||+++++++++|.++|+|+||+|+++.+++++|||.++|||++.+|+|++
T Consensus 238 ~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 238 FYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp TCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCEEEecCccccceeccccCCCCEEEEECCCCCcCCCccccCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEeec
Confidence 99999999999998875444555789999999999999987788999999999999999999999999999999999999
Q ss_pred CCCCCC--CCHhHHHHHHHHHHHHHHHHhhhcccc---------cccCCCCeEEEEEEeec-ccccChhhhhhHHhhccC
Q 004713 325 EADIDP--DDQNSILEHLDKVVRNLIERSSKKTVN---------RSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVA 392 (734)
Q Consensus 325 ~~~~~~--~~~~~i~~~l~~~Ve~li~~a~~~~~~---------~~~~~~PLiRLrVd~sg-~~~~n~~rfgq~f~gkVA 392 (734)
..++.+ .+.++|.++|.++|++||++|++++.. ..++++|||||||+||| |+++||+||||+|+||||
T Consensus 318 ~~~~~~~~~~~~~~~~~l~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~~f~~~~~~~va 397 (417)
T 4fbw_A 318 VSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVA 397 (417)
T ss_dssp CTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCTTSCCCCCCEEEEEEECTTTCCCCCHHHHHHTTTTTCS
T ss_pred ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCceeEEEEEecCCccccCHHHHHHhhccccc
Confidence 866654 368899999999999999999886532 34689999999999996 999999999999999999
Q ss_pred CccceEEEEEccc
Q 004713 393 NPQDILIFSKSSK 405 (734)
Q Consensus 393 Np~dil~f~k~~~ 405 (734)
||+|||+|||+|+
T Consensus 398 n~~d~~~~~~~~~ 410 (417)
T 4fbw_A 398 NATDVVQFYLKKV 410 (417)
T ss_dssp CTTCSEEEECC--
T ss_pred ChHHeeeeeeccC
Confidence 9999999997543
No 2
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=100.00 E-value=1.2e-80 Score=691.93 Aligned_cols=389 Identities=45% Similarity=0.825 Sum_probs=346.6
Q ss_pred CCCCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCC
Q 004713 7 EDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLND 86 (734)
Q Consensus 7 ~~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd 86 (734)
..+.++|||||+||+|||+...++.++.+.+.+|+++++.|.+++||+||++|||||...|+..++..+++.|++||+||
T Consensus 71 ~~~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~ 150 (472)
T 4fbk_A 71 AGSENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 150 (472)
T ss_dssp --CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 35678999999999999998888888999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeechhhhhc-ccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccce
Q 004713 87 RPVQFQVVSDQAVNF-QNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEI 165 (734)
Q Consensus 87 ~p~~~e~lSd~~~~F-~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i 165 (734)
+||+||+|+|+..+| .+.|.+|||+|||.+++||||+|+||||.+.+.+..+++++|..+|++++||... ..+++
T Consensus 151 ~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~----~~d~i 226 (472)
T 4fbk_A 151 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVP----ENDNI 226 (472)
T ss_dssp CCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCS----CSSSE
T ss_pred CcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcc----cCCce
Confidence 999999999999999 5789999999999999999999999999998877678999999999999999853 34678
Q ss_pred eEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccccCCcC
Q 004713 166 TVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRF 245 (734)
Q Consensus 166 ~v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~~ 245 (734)
.+.|+++++|.++++|||+||++++++.+++.+ ..+.++.|... ..+||||+|+|+++.++++.+++++.+++.+
T Consensus 227 ~~~pv~l~kg~~~valyGl~y~~d~rl~r~~~e-~~v~~~~p~~~----~~~~~nIlvlH~~~~~~~~~~yipe~ll~~g 301 (472)
T 4fbk_A 227 VVSPILLQKGFTKLALYGISNVRDERLYHSFRE-NKVKFLRPDLY----RDEWFNLLTVHQNHSAHTPTSYLPESFIQDF 301 (472)
T ss_dssp EECCEEEEETTEEEEEEECCCCCHHHHHHHHHT-TCEEEEEESTT----GGGEEEEEEEESCSCCSSTTSSCCGGGSCTT
T ss_pred eEEEEEEEeCCceEEEEecCCCchhhhhhhhhh-hhhhhhCcccc----cCCceEEEEecCCccCCCccccCChhhhhcC
Confidence 899999999999999999999999999888876 45777766421 2589999999999988877789999999999
Q ss_pred CCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEeccC
Q 004713 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILKDE 325 (734)
Q Consensus 246 ~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~~~~~e~IpL~tvRpf~~~eI~L~~~ 325 (734)
+|||||||+|.+++.+...+..+++++||||+++++++++|.++|+|+||+|+++.+++++|||.++|||++++|+|++.
T Consensus 302 ~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i~L~~~ 381 (472)
T 4fbk_A 302 YDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSEV 381 (472)
T ss_dssp CSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCGGGCSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred CCEEEecCcccceeeecccCCCCeEEEECCCccccccCccCCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEEecc
Confidence 99999999999988755455557899999999999999888889999999999999999999999999999999999998
Q ss_pred CCCCC--CCHhHHHHHHHHHHHHHHHHhhhccc---------ccccCCCCeEEEEEEeec-ccccChhhhhhHHhhccCC
Q 004713 326 ADIDP--DDQNSILEHLDKVVRNLIERSSKKTV---------NRSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVAN 393 (734)
Q Consensus 326 ~~~~~--~~~~~i~~~l~~~Ve~li~~a~~~~~---------~~~~~~~PLiRLrVd~sg-~~~~n~~rfgq~f~gkVAN 393 (734)
.++.+ ++.++|.++|.+.|++||++|++++. ...++++|||||||+||| |+++||+||||+|+|||||
T Consensus 382 ~~~~~~~~~~~~v~~~l~~~v~~~i~~a~~~~~~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~rf~~~f~~~van 461 (472)
T 4fbk_A 382 SSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVAN 461 (472)
T ss_dssp SSCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCTTSCCCCCCEEEEEEECTTTCCCCCHHHHHGGGTTTCSC
T ss_pred cccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcEEEEEEEecCCCcccCHhHHhhhhCCcccC
Confidence 76654 36889999999999999999987653 234689999999999997 9999999999999999999
Q ss_pred ccceEEEEEcc
Q 004713 394 PQDILIFSKSS 404 (734)
Q Consensus 394 p~dil~f~k~~ 404 (734)
|+|||+|||+|
T Consensus 462 p~d~~~f~~~~ 472 (472)
T 4fbk_A 462 ATDVVQFYLKK 472 (472)
T ss_dssp SSCSEEEECCC
T ss_pred hhheeEEEeCc
Confidence 99999999743
No 3
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=100.00 E-value=9.6e-80 Score=681.08 Aligned_cols=393 Identities=50% Similarity=0.860 Sum_probs=334.6
Q ss_pred CCCCCCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhcc
Q 004713 5 PREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCL 84 (734)
Q Consensus 5 ~~~~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~ 84 (734)
...+..++|||||+||+|||+...+..++.+.+.+|+++++.+.+++||+||++|||||...|+..++..++++|++||+
T Consensus 25 ~~~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 25 DALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCM 104 (431)
T ss_dssp --CCGGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHB
T ss_pred cCCCCCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhc
Confidence 34567789999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeechhhhhcc-cccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCcc
Q 004713 85 NDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVG 163 (734)
Q Consensus 85 gd~p~~~e~lSd~~~~F~-~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~ 163 (734)
||+||+||+|||++++|. +.|..+||+|||++++||||+|+||||++.+.+.++++++|+.+|+++|||+.. .++
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~~~~lL~~~glv~~fg~~~----~~e 180 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSM----SVE 180 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTTBCHHHHHHHHTSEEECCCCC----CSS
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccCHHHHhccCCcEEEECCcC----ccc
Confidence 999999999999999998 479999999999999999999999999999888889999999999999999752 356
Q ss_pred ceeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccccCC
Q 004713 164 EITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLP 243 (734)
Q Consensus 164 ~i~v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp 243 (734)
.+.+.|+++++|+++++|||+||.+++++.++|.. ..+.++.|... .++|+||+|+|+++...+...++++.+++
T Consensus 181 ~i~~~Pv~l~~g~~~valyGl~~~~~~~l~~~~~~-~~v~~~~p~~~----~~~~~~Ilv~H~~~~~~g~~~~ip~~l~~ 255 (431)
T 3t1i_A 181 KIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVN-KKVTMLRPKED----ENSWFNLFVIHQNRSKHGSTNFIPEQFLD 255 (431)
T ss_dssp CEEECCEEEEETTEEEEEEEECCCCHHHHHHHHHT-TCEEECCCSSC----GGGEEEEEEECSCCSCSSSSSSCCGGGSC
T ss_pred ceeeEEEEEecCCEeEEEEeCCCCCHHHHhhhhcc-ccceeeccccc----CCCceEEEEECCCccCCCccccCCHhHhh
Confidence 78889999999999999999999999999888765 35666666421 25899999999998776677889999999
Q ss_pred cCCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEec
Q 004713 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILK 323 (734)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~~~~~e~IpL~tvRpf~~~eI~L~ 323 (734)
.++|||+|||+|.+++.+...+..+++++||||++++|++++|.++|+|+||+|+++.+++++|||.++|||++.+|+|+
T Consensus 256 ~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s~~e~E~~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v~l~ 335 (431)
T 3t1i_A 256 DFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLA 335 (431)
T ss_dssp TTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGG
T ss_pred CCCCEEEecccccccccccccCCCCEEEEeCCCCcccCcCcccCCCCEEEEEEEECCEEEEEEEECCCcceEEEEEEEEe
Confidence 99999999999999876544444568999999999999998778999999999999999999999999999999999999
Q ss_pred cCCCC----CCCCHhHHHHHHHHHHHHHHHHhhhccc-ccccCCCCeEEEEEEeec-ccccChhhhhhHHhhccCCccce
Q 004713 324 DEADI----DPDDQNSILEHLDKVVRNLIERSSKKTV-NRSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDI 397 (734)
Q Consensus 324 ~~~~~----~~~~~~~i~~~l~~~Ve~li~~a~~~~~-~~~~~~~PLiRLrVd~sg-~~~~n~~rfgq~f~gkVANp~di 397 (734)
+..++ .+++.++|.++|.++|++||++|++++. ...++++|||||||+|+| |+++||+||||+|+|+||||+||
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~rf~~~~~~~van~~d~ 415 (431)
T 3t1i_A 336 NHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDI 415 (431)
T ss_dssp GCTTTCCSSCTTHHHHHHHHHHHHHHHHHHHHHHHTTTCSSSCSSCEEEEEEECTTTCCCCCSHHHHHHHTTTCSCSSSS
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEEEecCCCCccCHHHHHHhhCCcccChHHe
Confidence 87543 3456789999999999999999987643 345789999999999998 99999999999999999999999
Q ss_pred EEEEEcccc
Q 004713 398 LIFSKSSKK 406 (734)
Q Consensus 398 l~f~k~~~~ 406 (734)
|+|+|++++
T Consensus 416 ~~~~~~~~~ 424 (431)
T 3t1i_A 416 IHFFRHREQ 424 (431)
T ss_dssp EEEEC----
T ss_pred EEEEEecch
Confidence 999975543
No 4
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=100.00 E-value=2e-33 Score=299.44 Aligned_cols=293 Identities=26% Similarity=0.338 Sum_probs=200.2
Q ss_pred eEEEEEcCCCCCCCC-CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcce
Q 004713 13 VRILVATDCHLGYME-KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (734)
Q Consensus 13 mRILh~SD~HLG~~e-~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~~ 91 (734)
|||+|+||+|+|+.. ..+.+..+.+.+|+++++.|++++||+||++|||||...|+..++..+.+.|+++.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~-------- 72 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPK-------- 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHH--------
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHH--------
Confidence 899999999999864 34567788899999999999999999999999999999898888888888887752
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccceeE----
Q 004713 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITV---- 167 (734)
Q Consensus 92 e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~v---- 167 (734)
..++|||+|+||||.+.+. .+++++|...|+|++++...-.- ....+..
T Consensus 73 ------------------------~~~~~v~~v~GNHD~~~~~--~~~~~~l~~~g~v~vl~~~~~~~-~~~~~~~~~~~ 125 (333)
T 1ii7_A 73 ------------------------EHSIPVFAIEGNHDRTQRG--PSVLNLLEDFGLVYVIGMRKEKV-ENEYLTSERLG 125 (333)
T ss_dssp ------------------------TTTCCEEEECCTTTCCSSS--CCHHHHHHHTTSCEECEEESSCC-CSSSEEEEECT
T ss_pred ------------------------HCCCcEEEeCCcCCCccCC--cCHHHHHHHcCCcEEeccccccc-ccceeeecccC
Confidence 3479999999999997543 35678899999888887321000 0001111
Q ss_pred -EEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHh-hccchhhhhccCCCceEEEEEccCCCCCC---C--cCccccc
Q 004713 168 -YPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQ-WMRPEAQEECQVSDWFNILVLHQNRVKTN---P--KNAINEH 240 (734)
Q Consensus 168 -~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~-~l~p~~~~~~~~~~~fnILvlHqn~~~~~---~--~~~I~e~ 240 (734)
.|+++......++|||++|.....+.... ..+. .+. .+..||+++|+++.+.. . ...+...
T Consensus 126 ~~~~~~~~~~~~v~i~g~~~~~~~~~~~~~---~~l~~~~~---------~~~~~Ill~H~~~~~~~~~~~~~~~~~~~~ 193 (333)
T 1ii7_A 126 NGEYLVKGVYKDLEIHGMKYMSSAWFEANK---EILKRLFR---------PTDNAILMLHQGVREVSEARGEDYFEIGLG 193 (333)
T ss_dssp TSCEEEEEEETTEEEEEECCCCHHHHHSST---THHHHHCC---------CCSSEEEEEECCBHHHHHTTTCCCCSBCGG
T ss_pred CCceeeccCcCCEEEEecCCcCHHHHHHHH---HHHHHhhC---------CCCCeEEEEcCChhhcccccccccceecHH
Confidence 12222211146899999997655432210 0011 111 23359999999875321 1 1223344
Q ss_pred cCCcCCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccC--------------ccCCcEEEEEEEeCCceEEEE
Q 004713 241 FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEG--------------ESKPKHVLLLEIKENQYRPTK 306 (734)
Q Consensus 241 lLp~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~Eg--------------E~~~Kgv~LVeI~~~~~~~e~ 306 (734)
.++.++|||||||+|.++.. ...+.+++||||+.+++++|. +..+|||++|+ .+++++
T Consensus 194 ~l~~~~dyvalGH~H~~q~~----~~~~~~i~ypGS~~~~~~~E~~~~~~~~G~~~~p~~~~~kg~~lv~----~~~~~~ 265 (333)
T 1ii7_A 194 DLPEGYLYYALGHIHKRYET----SYSGSPVVYPGSLERWDFGDYEVRYEWDGIKFKERYGVNKGFYIVE----DFKPRF 265 (333)
T ss_dssp GSCTTCSEEEEESCSSCEEE----EETTEEEEECCCSSCCSGGGCSEEEEECSSSEEEEECCCCEEEEEE----TTEEEE
T ss_pred HCCccCCEEEccccccceec----CCCCceEEEcCCCeecccchhccccccccccccccccCCCeEEEEe----cCceeE
Confidence 55678999999999998753 212468999999999999874 23489999999 478999
Q ss_pred EECCCCCcEEEEEEEeccCCCCCCCCHhHHHHHHHHHHHHHHHHhhhcccccccCCCCeEEEEEEeecccccChhhhhh
Q 004713 307 IPLTSVRPFEYTEIILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNRSELKLPLVRIKVDYSGFMTINPQRFGQ 385 (734)
Q Consensus 307 IpL~tvRpf~~~eI~L~~~~~~~~~~~~~i~~~l~~~Ve~li~~a~~~~~~~~~~~~PLiRLrVd~sg~~~~n~~rfgq 385 (734)
+||.+ |||+..+|... .+++ .+.+++++.. ..+.+++||++.+.. .++...+-+
T Consensus 266 i~l~~-r~~~~~~i~~~---------~~~l----~~~~~~~~~~---------~~~~~~v~v~l~~~~--~~~~~~i~~ 319 (333)
T 1ii7_A 266 VEIKV-RPFIDVKIKGS---------EEEI----RKAIKRLIPL---------IPKNAYVRLNIGWRK--PFDLTEIKE 319 (333)
T ss_dssp EECCC-CCEEEEEEEEC---------HHHH----HHHHHHHGGG---------SCTTCEEEEEEEESS--CCCCHHHHH
T ss_pred EECCC-CceEEEEecCC---------HHHH----HHHHHHHhhc---------CCCCcEEEEEEEecC--ccCHHHHHH
Confidence 99997 99987666411 2223 3334433321 124689999998764 345444433
No 5
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=100.00 E-value=2.3e-32 Score=297.48 Aligned_cols=278 Identities=22% Similarity=0.318 Sum_probs=192.2
Q ss_pred CCCCceEEEEEcCCCCCCCCCc-hhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCC
Q 004713 8 DIANTVRILVATDCHLGYMEKD-EIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLND 86 (734)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d-~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd 86 (734)
....+|||+|+||+|+|....+ ..|..+.+.+|+++++.|++++||+||++|||||...|+..++..++++|+++.
T Consensus 16 ~~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~--- 92 (386)
T 3av0_A 16 PRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLH--- 92 (386)
T ss_dssp --CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHH---
T ss_pred cCCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH---
Confidence 4567899999999999976443 346677889999999999999999999999999999998888777888888763
Q ss_pred CCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCcccee
Q 004713 87 RPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEIT 166 (734)
Q Consensus 87 ~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~ 166 (734)
..++|||+|+||||.+.......++.+|... +++|+..
T Consensus 93 -----------------------------~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~--v~~l~~~----------- 130 (386)
T 3av0_A 93 -----------------------------ENNIKVYIVAGNHEMPRRLGEESPLALLKDY--VKILDGK----------- 130 (386)
T ss_dssp -----------------------------HTTCEEEECCCGGGSCSSTTSCCGGGGGTTT--CEECSEE-----------
T ss_pred -----------------------------hcCCcEEEEcCCCCCCccccccCHHHHHHHH--eEEcCCC-----------
Confidence 3478999999999998754433344555433 5666431
Q ss_pred EEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCCcC-ccccccCCcC
Q 004713 167 VYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKN-AINEHFLPRF 245 (734)
Q Consensus 167 v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~-~I~e~lLp~~ 245 (734)
++.+. ++..+.|+|++|........+. ..+.++.+.. ..+.++|+++|++..+..+.. .+....++.
T Consensus 131 --~v~~~-~~~~v~i~gl~~~~~~~~~~~~---~~l~~l~~~~-----~~~~~~Ill~H~~~~~~~~~~~~~~~~~l~~- 198 (386)
T 3av0_A 131 --DVINV-NGEEIFICGTYYHKKSKREEML---DKLKNFESEA-----KNYKKKILMLHQGINPYIPLDYELEHFDLPK- 198 (386)
T ss_dssp --EEEEE-TTEEEEEEEECCCCSTTHHHHH---HHHHHHHHHH-----HTCSSEEEEECCCCTTTSSSSCSSCGGGSCC-
T ss_pred --cEEEe-CCCCEEEEeCCCCCHHHHHHHH---HHHHHhhhhc-----ccCCCEEEEECcCccccCCCCcccCHHHhhh-
Confidence 23333 3467999999997643322221 1122222211 136799999999875432211 123334555
Q ss_pred CCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCcc---CCcEEEEEEEeC---CceEEEEEECCCCCcEEEEE
Q 004713 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGES---KPKHVLLLEIKE---NQYRPTKIPLTSVRPFEYTE 319 (734)
Q Consensus 246 ~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~---~~Kgv~LVeI~~---~~~~~e~IpL~tvRpf~~~e 319 (734)
+|||++||+|.++.. +..+..++||||+.++++.+.+. .+|+|++|++.+ +.++++++|+ ..||| .+
T Consensus 199 ~d~v~~GH~H~~~~~----~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~~~~~~~~v~~i~l-~~r~~--~~ 271 (386)
T 3av0_A 199 FSYYALGHIHKRILE----RFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDI-ECREF--VE 271 (386)
T ss_dssp CSEEEECSCCSCEEE----ECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCSSSCCGGGEEEEEC-CCCCE--EE
T ss_pred CCeEEccCCCCCccc----cCCCceEEECCcccccCcchhccccCCCCEEEEEEEecCcCCCceEEEEEC-Cccee--EE
Confidence 999999999997432 22246899999999999975321 579999999987 7789999999 58998 55
Q ss_pred EEeccCCCCCCCCHhHHHHHHHHHHHHHHHHhhhcccccccCCCCeEEEEEE
Q 004713 320 IILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNRSELKLPLVRIKVD 371 (734)
Q Consensus 320 I~L~~~~~~~~~~~~~i~~~l~~~Ve~li~~a~~~~~~~~~~~~PLiRLrVd 371 (734)
+.+.+ .+++.+ ++++... ..+.++|||+|.
T Consensus 272 ~~~~~--------~~~~~~--------~~~~~~~------~~~~~~v~l~l~ 301 (386)
T 3av0_A 272 VNIKD--------KKSFNE--------AVNKIER------CKNKPVVFGKIK 301 (386)
T ss_dssp EEECS--------HHHHHH--------HHHHHTS------SSSCCEEEEEEE
T ss_pred EeCCC--------hhhHHH--------HHHHHHh------CCCCcEEEEEEE
Confidence 65443 123322 2222211 236789999999
No 6
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.97 E-value=9e-31 Score=278.65 Aligned_cols=259 Identities=22% Similarity=0.262 Sum_probs=174.0
Q ss_pred CCCceEEEEEcCCCCC----CCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCC-CCCCCCCChhHHHHHHHHHHHhc
Q 004713 9 IANTVRILVATDCHLG----YMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGD-LFHENKPSRSTLVKAIEILRRHC 83 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG----~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGD-LFd~~kPs~~tl~~~~~lLr~l~ 83 (734)
...+|||||+|||||| ....+..|..+...+|+++++.|++++||+||++|| |||...|+..++..+.++|+++.
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 4578999999999999 444455677888899999999999999999999999 99999999887777788887752
Q ss_pred cCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCC-ceeeccceeecCCCc
Q 004713 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACN-LVNYFGKMVLGGSGV 162 (734)
Q Consensus 84 ~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~g-lVn~FGk~~l~~~~~ 162 (734)
.. +|||+|+||||.+. .. ....++...| ++++++...
T Consensus 95 --------------------------------~~-~pv~~i~GNHD~~~-~~--~~~~~l~~~g~nv~v~~~~~------ 132 (336)
T 2q8u_A 95 --------------------------------RT-APVVVLPGNHDWKG-LK--LFGNFVTSISSDITFVMSFE------ 132 (336)
T ss_dssp --------------------------------HH-SCEEECCC-------CH--HHHHHHHHHCSSEEECCSSS------
T ss_pred --------------------------------hc-CCEEEECCCCCccc-cc--cHHHHHHhcCCEEEEEeccc------
Confidence 23 89999999999876 32 2234555444 467776431
Q ss_pred cceeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcCh--hhHhhccchhhhhccCCCceEEEEEccCCCCCCC---c---
Q 004713 163 GEITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTP--HAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNP---K--- 234 (734)
Q Consensus 163 ~~i~v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~--~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~---~--- 234 (734)
.+ .|+.+. ...+.+||++|.....+...+... ..+.++...........+.++|+++|++..+... .
T Consensus 133 -~~--~~~~~~--~~~v~i~glp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~ 207 (336)
T 2q8u_A 133 -PV--DVEAKR--GQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQG 207 (336)
T ss_dssp -CE--EEECTT--SCEEEEEEECCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------
T ss_pred -cc--CceEEe--CCCEEEEECCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCccch
Confidence 11 133332 346999999998654332211100 0122221111100002467999999998764321 1
Q ss_pred --CccccccCCcCCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCC-ceEEEEEECCC
Q 004713 235 --NAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKEN-QYRPTKIPLTS 311 (734)
Q Consensus 235 --~~I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~-~~~~e~IpL~t 311 (734)
..++..+++.++|||++||+|.++.. .+ +..++||||+.++++++. ..+|+|++|+++++ .++++++|+..
T Consensus 208 ~~~~v~~~l~~~~~d~v~~GH~H~~~~~----~~-~~~i~y~GS~~~~s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~ 281 (336)
T 2q8u_A 208 REIIINRALIPSVVDYAALGHIHSFREI----QK-QPLTIYPGSLIRIDFGEE-ADEKGAVFVELKRGEPPRYERIDASP 281 (336)
T ss_dssp CCCEECGGGSCTTSSEEEEESCSSCEEE----EE-TTEEEECCCSSCCSGGGT-TCCCEEEEEEEETTSCCEEEEEECCC
T ss_pred hhcccCHHHccccCCEEEEccccCceEe----CC-CccEEECCCCcCCCcccc-CCCCEEEEEEEeCCCccEEEEEECCC
Confidence 12445667778999999999998654 22 247999999999999752 34899999999865 48999999998
Q ss_pred CCcEEEEEEE
Q 004713 312 VRPFEYTEII 321 (734)
Q Consensus 312 vRpf~~~eI~ 321 (734)
|||...++.
T Consensus 282 -r~~~~~~~~ 290 (336)
T 2q8u_A 282 -LPLKTLYYK 290 (336)
T ss_dssp -CCEEEEEEE
T ss_pred -EEEEEeecc
Confidence 999977763
No 7
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.97 E-value=1.5e-30 Score=283.16 Aligned_cols=250 Identities=23% Similarity=0.322 Sum_probs=174.5
Q ss_pred eEEEEEcCCCCCCC----CCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCCCChhHHHHHHHHHHHhccCCC
Q 004713 13 VRILVATDCHLGYM----EKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLF-HENKPSRSTLVKAIEILRRHCLNDR 87 (734)
Q Consensus 13 mRILh~SD~HLG~~----e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLF-d~~kPs~~tl~~~~~lLr~l~~gd~ 87 (734)
|||||+||||||.. ..+..+..+...+|+++++.+.+++||+||++|||| |...|+..++..+.+.|.++.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~---- 76 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM---- 76 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHH----
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHH----
Confidence 89999999999987 666667788889999999999999999999999999 788898887777777777652
Q ss_pred CcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhh--hCCceeeccceeecCCCccce
Q 004713 88 PVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILS--ACNLVNYFGKMVLGGSGVGEI 165 (734)
Q Consensus 88 p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~--~~glVn~FGk~~l~~~~~~~i 165 (734)
.. +|||+|+||||... +..+..+. .+..+.++..
T Consensus 77 ----------------------------~~-~~v~~i~GNHD~~~----~~~~~~~~~~~~~~~~~~~~----------- 112 (379)
T 3tho_B 77 ----------------------------RT-APVVVLPGNQDWKG----LKLFGNFVTSISSDITFVMS----------- 112 (379)
T ss_dssp ----------------------------HH-SCEEECCCTTSCTT----HHHHHHHHHTTCSSEEECCS-----------
T ss_pred ----------------------------hC-CCEEEEcCCCcccc----CccccccccccCCcceeecc-----------
Confidence 24 89999999999532 11112221 1233433322
Q ss_pred eEEEEEEee-CCeeEEEEecCCCChHHHHhhhcChhhHhhccchhh----hhccCCCceEEEEEccCCCCCCC----c--
Q 004713 166 TVYPILIRK-GSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQ----EECQVSDWFNILVLHQNRVKTNP----K-- 234 (734)
Q Consensus 166 ~v~Pill~k-G~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~----~~~~~~~~fnILvlHqn~~~~~~----~-- 234 (734)
..|+.+.. .+..+.|||++|.........+.. ....|+..... ... ..+.++|+++|+.+.+..+ .
T Consensus 113 -~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~-~~~~~~I~l~H~~v~g~~~~~~se~~ 189 (379)
T 3tho_B 113 -FEPVDVEAKRGQKVRILPFPYPDESEALRKNEG-DFRFFLESRLNKLYEEAL-KKEDFAIFMGHFTVEGLAGYAGIEQG 189 (379)
T ss_dssp -SCCEEEECTTCCEEEEEEECCCCCC----CHHH-HHHHHHHHHHHHHHHHHH-TCSSEEEEEEESCBSCCCC-------
T ss_pred -cceEEEEcCCCCEEEEEECCCCCHHHHhhhhcc-chHHHHHHHHHHHHHHhc-CCCCCeEEEEeccccCCccCCCCccc
Confidence 13455552 334799999999864332111110 01122211110 001 2578999999999876432 1
Q ss_pred --CccccccCCcCCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCCc-eEEEEEECCC
Q 004713 235 --NAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQ-YRPTKIPLTS 311 (734)
Q Consensus 235 --~~I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~~-~~~e~IpL~t 311 (734)
..++..+++.++||||+||+|.++ .+.+ +.+++||||+++++|+|. ..+|+|++|++++++ +++++|| ..
T Consensus 190 ~~~~v~~~~~~~~~dyvalGH~H~~q----~~~~-~~~i~y~GS~~~~~f~E~-~~~k~~~lv~~~~~~~~~v~~i~-~~ 262 (379)
T 3tho_B 190 REIIINRALIPSVVDYAALGHIHSFR----EIQK-QPLTIYPGSLIRIDFGEE-ADEKGAVFVELKRGEPPRYERID-AS 262 (379)
T ss_dssp CSCCBCGGGSCTTSSEEEEESCSSCE----EEEE-TTEEEECCCSSCCSGGGS-SSCCEEEEEECCSSSCCEEEEEE-CC
T ss_pred cccccCHHHcCcCCCEEEcccccCCe----EeCC-CCcEEecCCCCCCCcccc-cCCCEEEEEEEcCCCcceEEEeC-CC
Confidence 134566777899999999999974 3333 258999999999999862 457999999998654 7999999 77
Q ss_pred CCcEEEEEE
Q 004713 312 VRPFEYTEI 320 (734)
Q Consensus 312 vRpf~~~eI 320 (734)
.|||...++
T Consensus 263 ~r~~~~~~~ 271 (379)
T 3tho_B 263 PLPLKTLYY 271 (379)
T ss_dssp CCCEEEEEC
T ss_pred CeeeEEEEc
Confidence 899986665
No 8
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.80 E-value=1.7e-19 Score=182.96 Aligned_cols=242 Identities=17% Similarity=0.214 Sum_probs=139.8
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcc
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~--~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~ 90 (734)
|||+|+||+|++..........+...+|+++++.+.+. ++|+||++|||++...+ ..+..+.++|+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~---------- 68 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRP--EEYQVARQILG---------- 68 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCH--HHHHHHHHHHT----------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH--HHHHHHHHHHH----------
Confidence 79999999999964322222256678999999999876 68999999999987643 22333333332
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccceeEEEE
Q 004713 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI 170 (734)
Q Consensus 91 ~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~v~Pi 170 (734)
..++|+|+|+||||..... ...|... ++... .. ..... .
T Consensus 69 -------------------------~l~~p~~~v~GNHD~~~~~-----~~~~~~~----~~~~~---~~-~~~~~---~ 107 (274)
T 3d03_A 69 -------------------------SLNYPLYLIPGNHDDKALF-----LEYLQPL----CPQLG---SD-ANNMR---C 107 (274)
T ss_dssp -------------------------TCSSCEEEECCTTSCHHHH-----HHHHGGG----SGGGC---SC-GGGCC---E
T ss_pred -------------------------hcCCCEEEECCCCCCHHHH-----HHHhhhh----hcCcc---cC-CCceE---E
Confidence 2368999999999985311 1223221 11000 00 00000 1
Q ss_pred EEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCCc--C--ccc-----ccc
Q 004713 171 LIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK--N--AIN-----EHF 241 (734)
Q Consensus 171 ll~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~--~--~I~-----e~l 241 (734)
.+..+ .+.++|+...........+. ...+.|+...... ..+...|+++|++....... . .+. ..+
T Consensus 108 ~~~~~--~~~~i~ld~~~~~~~~~~~~-~~~~~wl~~~l~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~ 181 (274)
T 3d03_A 108 AVDDF--ATRLLFIDSSRAGTSKGWLT-DETISWLEAQLFE---GGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLAL 181 (274)
T ss_dssp EECSS--SSEEEECCCCCTTCSSBCCC-HHHHHHHHHHHHH---HTTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHH
T ss_pred EEEeC--CEEEEEEeCCCCCCCCCeeC-HHHHHHHHHHHHh---CCCCCEEEEECCCCcccCCcccCcccCcCHHHHHHH
Confidence 12222 46677776542110000011 1234455433211 13568999999986543210 0 000 123
Q ss_pred CC-c-CCCEEEeCcccccccCCeecCCCCceEecCCCCccccccc------CccCCcEEEEEEEeCCceEEEEEEC---C
Q 004713 242 LP-R-FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIE------GESKPKHVLLLEIKENQYRPTKIPL---T 310 (734)
Q Consensus 242 Lp-~-~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~E------gE~~~Kgv~LVeI~~~~~~~e~IpL---~ 310 (734)
+. . .+|+|++||+|..+.. ...+ ...+++||+.....+.. ....+++|.++++.++.+.++++++ .
T Consensus 182 l~~~~~v~~vl~GH~H~~~~~--~~~g-~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~~~~~~~~~~~~~~~~ 258 (274)
T 3d03_A 182 VERFPSLTRIFCGHNHSLTMT--QYRQ-ALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGEQWVSYQHSLAHYA 258 (274)
T ss_dssp HHHCTTEEEEEECSSSSCEEE--EETT-EEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEETTEEEEEEEECSCCS
T ss_pred HHhCCCceEEEeCCCCCchhh--eECC-EEEEEcCCcceeeccCCCccccccccCCCceEEEEEeCCcEEEEEEecCCCC
Confidence 32 2 5899999999998653 2222 25788999986544321 1235789999999998888888777 3
Q ss_pred CCCcEE
Q 004713 311 SVRPFE 316 (734)
Q Consensus 311 tvRpf~ 316 (734)
.++||.
T Consensus 259 ~~~~f~ 264 (274)
T 3d03_A 259 GPWLYD 264 (274)
T ss_dssp CCEECC
T ss_pred CCCCcc
Confidence 345554
No 9
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.80 E-value=7.9e-19 Score=183.08 Aligned_cols=243 Identities=16% Similarity=0.161 Sum_probs=141.5
Q ss_pred CCCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh--cCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccC
Q 004713 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ--KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLN 85 (734)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e--~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~g 85 (734)
.....|||+|+||+|++..........+....|+++++.+.+ .+||+||++|||++...+ ..+..+.++|+.+.
T Consensus 21 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~l~-- 96 (330)
T 3ib7_A 21 HPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP--AAYRKLRGLVEPFA-- 96 (330)
T ss_dssp SCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCH--HHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH--HHHHHHHHHHHHHH--
Confidence 445689999999999987654333344678899999999988 899999999999998754 34444555555431
Q ss_pred CCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccce
Q 004713 86 DRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEI 165 (734)
Q Consensus 86 d~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i 165 (734)
...++|||+|+||||.... ....+.... ..++..
T Consensus 97 -----------------------------~~~~~pv~~v~GNHD~~~~-----~~~~~~~~~--~~~~~~---------- 130 (330)
T 3ib7_A 97 -----------------------------AQLGAELVWVMGNHDDRAE-----LRKFLLDEA--PSMAPL---------- 130 (330)
T ss_dssp -----------------------------HHHTCEEEECCCTTSCHHH-----HHHHHHCCC--CCCSCC----------
T ss_pred -----------------------------hhcCCCEEEeCCCCCCHHH-----HHHHhcccc--cccCCc----------
Confidence 0236899999999997421 111221111 001100
Q ss_pred eEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCCc--Cc-------
Q 004713 166 TVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK--NA------- 236 (734)
Q Consensus 166 ~v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~--~~------- 236 (734)
...+..++ +.++++...........+ ....+.|+...... ......|+++|+........ ..
T Consensus 131 ---~~~~~~~~--~~~i~lds~~~~~~~~~~-~~~q~~wl~~~l~~---~~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~ 201 (330)
T 3ib7_A 131 ---DRVCMIDG--LRIIVLDTSVPGHHHGEI-RASQLGWLAEELAT---PAPDGTILALHHPPIPSVLDMAVTVELRDQA 201 (330)
T ss_dssp ---CEEEEETT--EEEEECCCCCTTCCSBCC-CHHHHHHHHHHTTS---CCTTCEEEECSSCSSCCSSGGGGGGSBSCHH
T ss_pred ---ceEEEeCC--EEEEEecCCCCCCCCCcc-CHHHHHHHHHHHHh---cccCCeEEEEECCCCCCCccccccccccCHH
Confidence 01122222 333444322100000000 01234444332211 12334899999876543210 00
Q ss_pred -cccccCCcCCCEEEeCcccccccCCeecCCCCceEecCCCCccccc-------ccCccCCcEEEEEEEeCCceEEEEEE
Q 004713 237 -INEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSL-------IEGESKPKHVLLLEIKENQYRPTKIP 308 (734)
Q Consensus 237 -I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl-------~EgE~~~Kgv~LVeI~~~~~~~e~Ip 308 (734)
+.+-+....+|+|++||+|..+.. ... +..+++|||+..... ..++..+++|.+|+|.++++.+++++
T Consensus 202 ~l~~~l~~~~v~~v~~GH~H~~~~~--~~~--g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~~~~~~~~v~ 277 (330)
T 3ib7_A 202 ALGRVLRGTDVRAILAGHLHYSTNA--TFV--GIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSVIP 277 (330)
T ss_dssp HHHHHHTTSSEEEEEECSSSSCEEE--EET--TEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHhccCceEEEECCCCCcccc--eEC--CEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEECCCeEEEEec
Confidence 111122347999999999998642 222 467888888863211 11124578999999999999999999
Q ss_pred CCCCC
Q 004713 309 LTSVR 313 (734)
Q Consensus 309 L~tvR 313 (734)
+....
T Consensus 278 ~~~~~ 282 (330)
T 3ib7_A 278 LGGGE 282 (330)
T ss_dssp CSCCC
T ss_pred cCCCC
Confidence 87543
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.76 E-value=4.3e-18 Score=167.69 Aligned_cols=203 Identities=16% Similarity=0.201 Sum_probs=115.7
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcc
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~ 90 (734)
.+|||+|+||+|+++ ..|+++++.+.++++|+||++|||++...+. ..+..+++.|+
T Consensus 4 ~~mri~~iSD~H~~~------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~-~~~~~~~~~l~---------- 60 (228)
T 1uf3_A 4 TVRYILATSNPMGDL------------EALEKFVKLAPDTGADAIALIGNLMPKAAKS-RDYAAFFRILS---------- 60 (228)
T ss_dssp CCCEEEEEECCTTCH------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCH-HHHHHHHHHHG----------
T ss_pred ceEEEEEEeeccCCH------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCH-HHHHHHHHHHH----------
Confidence 369999999999973 4678888888888999999999999876432 32333333332
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhh--------CCceeeccceeecCCCc
Q 004713 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSA--------CNLVNYFGKMVLGGSGV 162 (734)
Q Consensus 91 ~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~--------~glVn~FGk~~l~~~~~ 162 (734)
..++|||+|+||||.+.. +.+.. ++.....+.
T Consensus 61 -------------------------~~~~pv~~v~GNHD~~~~-------~~~~~~~~~~~~~~~~~~l~~~-------- 100 (228)
T 1uf3_A 61 -------------------------EAHLPTAYVPGPQDAPIW-------EYLREAANVELVHPEMRNVHET-------- 100 (228)
T ss_dssp -------------------------GGCSCEEEECCTTSCSHH-------HHHHHHHHHHHHCTTEEECBTS--------
T ss_pred -------------------------hcCCcEEEECCCCCchhH-------HHHHhhhhhhccCcceEEcccc--------
Confidence 236899999999998632 12221 122221111
Q ss_pred cceeEEEEEEeeCCeeEEEEecCCCC-------hHHHHhh--hcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCC
Q 004713 163 GEITVYPILIRKGSTAVALYGLGNIR-------DERLNRM--FQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNP 233 (734)
Q Consensus 163 ~~i~v~Pill~kG~t~vaLyGL~~i~-------derL~~~--f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~ 233 (734)
.+.+ + ..+.++|+++.. ++.+.+. +.......++.. .....+|++.|++......
T Consensus 101 ------~~~~--~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~il~~H~p~~~~~~ 164 (228)
T 1uf3_A 101 ------FTFW--R-GPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWE-------LKDYPKIFLFHTMPYHKGL 164 (228)
T ss_dssp ------EEEE--T-TTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGG-------SCSCCEEEEESSCBCBTTT
T ss_pred ------eEee--C-CCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHh-------CCCCCeEEEEccCcccCCc
Confidence 1111 1 135666665321 1111000 000000122221 1235899999998643211
Q ss_pred cCccc---cccC-CcCCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCCceEEEEEEC
Q 004713 234 KNAIN---EHFL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPL 309 (734)
Q Consensus 234 ~~~I~---e~lL-p~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~~~~~e~IpL 309 (734)
...-. ..++ ...+|||++||+|.. . ... + +..+++|||.. ..+++++++++ ++++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~GH~H~~-~--~~~-~-~~~~in~Gs~~----------~~~~~i~~~~~--~~~~~~~v 227 (228)
T 1uf3_A 165 NEQGSHEVAHLIKTHNPLLVLVAGKGQK-H--EML-G-ASWVVVPGDLS----------EGEYSLLDLRA--RKLETGNV 227 (228)
T ss_dssp BTTSBHHHHHHHHHHCCSEEEECCSSCE-E--EEE-T-TEEEEECCBGG----------GTEEEEEETTT--TEEEEEEC
T ss_pred cccCHHHHHHHHHHhCCCEEEEcccccC-c--ccc-C-CceEEEecccC----------CCceEEEEecc--eEeeeccc
Confidence 00000 1122 246899999999933 2 222 2 46789999873 45799999875 56666554
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.73 E-value=2.4e-17 Score=166.71 Aligned_cols=44 Identities=9% Similarity=0.288 Sum_probs=38.0
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK 66 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~k 66 (734)
.+|||+|+||+|+++. .|+++++.+.+.++|+||++|||++...
T Consensus 4 ~~mri~~iSDlH~~~~------------~~~~~l~~~~~~~~D~vi~~GDl~~~~~ 47 (260)
T 2yvt_A 4 MPRKVLAIKNFKERFD------------LLPKLKGVIAEKQPDILVVVGNILKNEA 47 (260)
T ss_dssp CCCEEEEEECCTTCGG------------GHHHHHHHHHHHCCSEEEEESCCCCCHH
T ss_pred ceEEEEEEeecCCChH------------HHHHHHHHHHhcCCCEEEECCCCCCccC
Confidence 4699999999999842 4788888888899999999999998763
No 12
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.68 E-value=2.2e-16 Score=155.43 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=52.0
Q ss_pred cCCCEEEeCcccccccCCeecCCCCceEecCCCCcc-cccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEe
Q 004713 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVA-TSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIIL 322 (734)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~-tSl~EgE~~~Kgv~LVeI~~~~~~~e~IpL~tvRpf~~~eI~L 322 (734)
..+|+|++||+|.+... .. .+..+++|||+.. +...+ ...+++|++|++.++.++++.+++..-+ +....++.
T Consensus 116 ~~~d~vi~GHtH~~~~~--~~--~~~~~inpGS~~~~~~~~~-~~~~~~y~il~~~~~~~~~~~~~~~~~~-~~v~~~~~ 189 (192)
T 1z2w_A 116 FDVDILISGHTHKFEAF--EH--ENKFYINPGSATGAYNALE-TNIIPSFVLMDIQASTVVTYVYQLIGDD-VKVERIEY 189 (192)
T ss_dssp HSSSEEECCSSCCCEEE--EE--TTEEEEECCCTTCCCCSSC-SCCCCEEEEEEEETTEEEEEEEEEETTE-EEEEEEEE
T ss_pred cCCCEEEECCcCcCccE--eE--CCEEEEECCcccccCCCCC-cCCCCcEEEEEEECCEEEEEEEEccCCE-EEEEEEEE
Confidence 46899999999997642 22 2478999999853 22111 2346899999999989999999997654 54444443
No 13
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.66 E-value=8.2e-16 Score=154.39 Aligned_cols=99 Identities=19% Similarity=0.204 Sum_probs=62.8
Q ss_pred CceEEEEEccCCCCCC-CcCccccccCCcCCCEEEeCcccccccCCeecCCCCceEecCCCCcc-cccccCccCCcEEEE
Q 004713 217 DWFNILVLHQNRVKTN-PKNAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVA-TSLIEGESKPKHVLL 294 (734)
Q Consensus 217 ~~fnILvlHqn~~~~~-~~~~I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~-tSl~EgE~~~Kgv~L 294 (734)
+.++|+++|+...... ....+...+....+|+|++||+|.+... .. .+..+++|||... ....+ ...+++|++
T Consensus 112 ~~~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vl~GHtH~~~~~--~~--~~~~~inpGS~~~~~~~~~-~~~~~~y~i 186 (215)
T 2a22_A 112 GEFKIGLMHGNQVLPWDDPGSLEQWQRRLDCDILVTGHTHKLRVF--EK--NGKLFLNPGTATGAFSALT-PDAPPSFML 186 (215)
T ss_dssp TTEEEEEECSTTSSSTTCHHHHHHHHHHHTCSEEEECSSCCCEEE--EE--TTEEEEECCCSSCCCCTTS-TTCCCEEEE
T ss_pred CCeEEEEEcCCccCCCCCHHHHHHHHhhcCCCEEEECCcCCCccE--ee--CCEEEEECCcccccCCCCC-CCCCCcEEE
Confidence 3468899996542210 0001111111246899999999997642 22 2478999999853 22112 234689999
Q ss_pred EEEeCCceEEEEEECCCCCcEEEEEEE
Q 004713 295 LEIKENQYRPTKIPLTSVRPFEYTEII 321 (734)
Q Consensus 295 VeI~~~~~~~e~IpL~tvRpf~~~eI~ 321 (734)
|++.++.++++.+++..-+ +.+..++
T Consensus 187 l~i~~~~i~~~~~~~~~~~-~~v~~~~ 212 (215)
T 2a22_A 187 MALQGNKVVLYVYDLRDGK-TNVAMSE 212 (215)
T ss_dssp EEEETTEEEEEEEEEETTE-EEEEEEE
T ss_pred EEEeCCcEEEEEEEecCCe-EEEEEEE
Confidence 9999989999999997643 5555554
No 14
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.65 E-value=2.2e-15 Score=165.20 Aligned_cols=248 Identities=19% Similarity=0.173 Sum_probs=135.2
Q ss_pred CCCCceEEEEEcCCCCCCCCC---ch-----------hchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHH
Q 004713 8 DIANTVRILVATDCHLGYMEK---DE-----------IRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLV 73 (734)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~---d~-----------~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~ 73 (734)
....+|||+|+||+|++.... +. .........|+.+++.+.+.+||+||++|||++...+. ...
T Consensus 35 ~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~--~~~ 112 (443)
T 2xmo_A 35 EKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKT--SHE 112 (443)
T ss_dssp CSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHH--HHH
T ss_pred cCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHH--HHH
Confidence 345679999999999985421 00 00113577899999999999999999999999876532 233
Q ss_pred HHHHHHHHhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCc------------chH--
Q 004713 74 KAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDN------------LSA-- 139 (734)
Q Consensus 74 ~~~~lLr~l~~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~------------lsa-- 139 (734)
.+.+.|+.+. ..++||++|+||||....... +++
T Consensus 113 ~~~~~l~~l~--------------------------------~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~ 160 (443)
T 2xmo_A 113 ELAKKLTQVE--------------------------------KNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD 160 (443)
T ss_dssp HHHHHHHHHH--------------------------------HTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHH
T ss_pred HHHHHHHHHH--------------------------------hCCCeEEEECCcCCCCCccccccCCcccccccccCHHH
Confidence 4455555431 247899999999998653211 001
Q ss_pred -HHHhhhCCceeeccceeecCCCccceeEEEEEE-eeCCeeEEEEecCCCChH--HH------HhhhcChhhHhhccchh
Q 004713 140 -VDILSACNLVNYFGKMVLGGSGVGEITVYPILI-RKGSTAVALYGLGNIRDE--RL------NRMFQTPHAVQWMRPEA 209 (734)
Q Consensus 140 -ldiL~~~glVn~FGk~~l~~~~~~~i~v~Pill-~kG~t~vaLyGL~~i~de--rL------~~~f~~~~~v~~l~p~~ 209 (734)
..++...|+...+... .... +..+ ..+ .+.|+|++..... .. ...+. ...+.|+....
T Consensus 161 ~~~~~~~~~~~~~~~~~------~~~~---~y~~~~~~--~~~~i~Lds~~~~~~~~~~~~~~~g~~~-~~ql~wL~~~L 228 (443)
T 2xmo_A 161 FSKIYSDFGYEDAISSD------EFSL---SYLAAPSS--KVWLLMLDTAIYKTNMQQGNPTTEGGLT-AGTLDWIKESS 228 (443)
T ss_dssp HHHHTCCCCCTTCSEEC------SSSS---CEEECSBS--SEEEEECCCBCCTTHHHHTSCCCCBCCC-HHHHHHHHHHH
T ss_pred HHHHhhhcChhhhhccC------CCCc---eEEEecCC--CEEEEEeeCCCcCcccccCCCCcCCccC-HHHHHHHHHHH
Confidence 0111111111110000 0000 1111 122 3555555432100 00 00000 12344543322
Q ss_pred hhhccCCCceEEEEEccCCCCCCCc---Cc-cc-----cccC-CcCCCEEEeCcccccccCCee-cCCCCceEecCCCCc
Q 004713 210 QEECQVSDWFNILVLHQNRVKTNPK---NA-IN-----EHFL-PRFLDFVVWGHEHECLIDPQE-VPGMGFHLTQPGSSV 278 (734)
Q Consensus 210 ~~~~~~~~~fnILvlHqn~~~~~~~---~~-I~-----e~lL-p~~~DyVa~GH~H~~~i~Pq~-~~~~~~~I~yPGS~v 278 (734)
.. .+..+...|+++|++....... .+ +. ..++ ..++|+|++||+|........ ..+.+..++.+||..
T Consensus 229 ~~-~~~~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~ 307 (443)
T 2xmo_A 229 AL-AKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALS 307 (443)
T ss_dssp HH-HHHTTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTT
T ss_pred HH-HHHcCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCccc
Confidence 11 1123567899999987543210 01 10 1122 236999999999997653211 122346778889854
Q ss_pred ccccccCccCCcEEEEEEEeCCc--eEEEEEECC
Q 004713 279 ATSLIEGESKPKHVLLLEIKENQ--YRPTKIPLT 310 (734)
Q Consensus 279 ~tSl~EgE~~~Kgv~LVeI~~~~--~~~e~IpL~ 310 (734)
. .+.+|.++++.++. ++++.+.+.
T Consensus 308 ~--------~p~~y~il~i~~~~~~~~~~~~~l~ 333 (443)
T 2xmo_A 308 V--------FPHKYGNITYSAKNKNFTYQSQKLD 333 (443)
T ss_dssp S--------TTCEEEEEEEETTTTEEEEEEEECC
T ss_pred c--------CCCCeEEEEEeCCCceEEEEEEEEe
Confidence 2 36799999998876 566665554
No 15
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.59 E-value=4.6e-15 Score=145.46 Aligned_cols=52 Identities=23% Similarity=0.293 Sum_probs=42.4
Q ss_pred cCCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCCceEEEEEEC
Q 004713 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPL 309 (734)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~~~~~e~IpL 309 (734)
..+|++++||+|.+... .. .+..+++|||... .+|++++++++.+++++++|
T Consensus 127 ~~~d~vi~GHtH~~~~~--~~--~~~~~iNpGS~~~----------~sy~il~~~~~~~~~~~~~l 178 (178)
T 2kkn_A 127 EKPQVILFGHTHEPEDT--VK--AGVRFLNPGSLAE----------GSYAVLELDGGEVRFELKTL 178 (178)
T ss_dssp SCCSEEECCSCSSCCEE--EE--TTEEEECCCCTTT----------TEEEEEEEETTEEEEEEEEC
T ss_pred cCCCEEEECccCCCCeE--Ee--CCEEEEECCCCCC----------CeEEEEEECCCEEEEEEEeC
Confidence 46899999999998653 22 2578999999743 68999999998899998876
No 16
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.55 E-value=1.8e-14 Score=142.56 Aligned_cols=163 Identities=18% Similarity=0.288 Sum_probs=102.5
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcc
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~ 90 (734)
+||||+++||+|.. +.+|+++++.+.+.++|+|+++|||++ | .+++.|++
T Consensus 24 g~m~i~~iSD~Hg~------------~~~l~~~l~~~~~~~~D~ii~~GDl~~---~------~~~~~l~~--------- 73 (190)
T 1s3l_A 24 GHMKIGIMSDTHDH------------LPNIRKAIEIFNDENVETVIHCGDFVS---L------FVIKEFEN--------- 73 (190)
T ss_dssp --CEEEEECCCTTC------------HHHHHHHHHHHHHSCCSEEEECSCCCS---T------HHHHHGGG---------
T ss_pred CCeEEEEEeeCCCC------------HHHHHHHHHHHhhcCCCEEEECCCCCC---H------HHHHHHHh---------
Confidence 36999999999931 457889999988899999999999996 2 23333321
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccceeEEEE
Q 004713 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI 170 (734)
Q Consensus 91 ~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~v~Pi 170 (734)
.++||++|+||||.... .....+ ... +++.+
T Consensus 74 --------------------------l~~~~~~V~GNhD~~~~----~~~~~~---------~~~-----~~~~l----- 104 (190)
T 1s3l_A 74 --------------------------LNANIIATYGNNDGERC----KLKEWL---------KDI-----NEENI----- 104 (190)
T ss_dssp --------------------------CSSEEEEECCTTCCCHH----HHHHHH---------HHH-----CTTCE-----
T ss_pred --------------------------cCCCEEEEeCCCcchHH----HHHHHh---------ccc-----Chhhh-----
Confidence 25799999999997531 000111 100 00000
Q ss_pred EEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccccCCc-CCCEE
Q 004713 171 LIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR-FLDFV 249 (734)
Q Consensus 171 ll~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~-~~DyV 249 (734)
...+ ..+ ..+.++|+++|++... +.+.+... .+|++
T Consensus 105 -----------~~~~-----------------~~~---------~~~~~~ill~Hg~~~~------l~~~~~~~~~~d~v 141 (190)
T 1s3l_A 105 -----------IDDF-----------------ISV---------EIDDLKFFITHGHHQS------VLEMAIKSGLYDVV 141 (190)
T ss_dssp -----------EESE-----------------EEE---------EETTEEEEEEESCCHH------HHHHHHHHSCCSEE
T ss_pred -----------cccc-----------------eEE---------eeCCcEEEEECCChHH------HHHHHHhcCCCCEE
Confidence 0000 000 0135789999986321 22222233 69999
Q ss_pred EeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCCceEE
Q 004713 250 VWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRP 304 (734)
Q Consensus 250 a~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~~~~~ 304 (734)
++||+|.+++. .. .+..+++|||... . . ..+.+|+++++.++.+++
T Consensus 142 l~GHtH~~~~~--~~--~~~~~iNpGs~~~--r-~--~~~~~y~il~~~~~~v~~ 187 (190)
T 1s3l_A 142 IYGHTHERVFE--EV--DDVLVINPGECCG--Y-L--TGIPTIGILDTEKKEYRE 187 (190)
T ss_dssp EEECSSCCEEE--EE--TTEEEEECCCSSC--T-T--TSCCEEEEEETTTTEEEE
T ss_pred EECCCCCcceE--EE--CCEEEEECCcccc--c-C--CCCCEEEEEEcCCCcEEE
Confidence 99999998653 22 2478999999865 2 1 246899999998765443
No 17
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.55 E-value=6.2e-14 Score=144.17 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=62.3
Q ss_pred CCceEEEEEcCCCCCCCCCch-------hchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCC----hhHHHHHHHH
Q 004713 10 ANTVRILVATDCHLGYMEKDE-------IRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPS----RSTLVKAIEI 78 (734)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~-------~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs----~~tl~~~~~l 78 (734)
...|||+|+||+|++...... ....+....|+++++.+.+.++|+||++|||++...+. ...+..+++.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 357999999999999743211 12345678899999999889999999999999875311 2223333333
Q ss_pred HHHhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004713 79 LRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (734)
Q Consensus 79 Lr~l~~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p 131 (734)
|+ ..++|||+|+||||..
T Consensus 83 l~-----------------------------------~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 83 LD-----------------------------------ACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HH-----------------------------------TTCSEEEECCCHHHHH
T ss_pred HH-----------------------------------hcCCcEEEecCCCCcc
Confidence 33 2368999999999983
No 18
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.49 E-value=4.4e-13 Score=137.51 Aligned_cols=254 Identities=15% Similarity=0.182 Sum_probs=128.9
Q ss_pred CCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCC
Q 004713 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRP 88 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p 88 (734)
+.+.|||+|+||+|++....- .........+.+.+.+.+.+||+||++||++.........-....+.+..+
T Consensus 3 ~~~~~~~~~isD~h~~~~~~~--~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~------ 74 (313)
T 1ute_A 3 PTPILRFVAVGDWGGVPNAPF--HTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDV------ 74 (313)
T ss_dssp CCCCEEEEEECSCCCCSSTTS--SCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTT------
T ss_pred CCCceEEEEEcccCCCCCccc--cCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHH------
Confidence 346899999999999853210 001112233444445667899999999999765321110000122222211
Q ss_pred cceeeechhhhhcccccCccccCCCCCCC-CCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccceeE
Q 004713 89 VQFQVVSDQAVNFQNKFGHVNYEDPHFNV-GLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITV 167 (734)
Q Consensus 89 ~~~e~lSd~~~~F~~~f~~lNy~dpn~n~-~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~v 167 (734)
+.. ... ++|+|+|+||||...... ..+.......-. .+.. . +
T Consensus 75 ----------------~~~-------~~l~~~p~~~v~GNHD~~~~~~--~~~~~~~~~~~~-~~~~---------~--~ 117 (313)
T 1ute_A 75 ----------------FSD-------PSLRNVPWHVLAGNHDHLGNVS--AQIAYSKISKRW-NFPS---------P--Y 117 (313)
T ss_dssp ----------------SCS-------GGGTTCCEEECCCHHHHHSCHH--HHHHGGGTSTTE-ECCS---------S--S
T ss_pred ----------------cCc-------hhhcCCCEEEECCCCccCCCcc--ccccccccCCCc-cCcc---------c--c
Confidence 000 013 689999999999854211 111111100000 0110 0 0
Q ss_pred EEEEEe--eCCeeEEEEecCCCC-----------------hHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCC
Q 004713 168 YPILIR--KGSTAVALYGLGNIR-----------------DERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNR 228 (734)
Q Consensus 168 ~Pill~--kG~t~vaLyGL~~i~-----------------derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~ 228 (734)
....+. .++..+.+++|.... ...+. ...+.|+...... ....+.|+++|.+.
T Consensus 118 y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~-----~~q~~wL~~~L~~---~~~~~~iv~~H~p~ 189 (313)
T 1ute_A 118 YRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALA-----RTQLAWIKKQLAA---AKEDYVLVAGHYPV 189 (313)
T ss_dssp EEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHH-----HHHHHHHHHHHHH---CCCSEEEEECSSCS
T ss_pred eEEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccchH-----HHHHHHHHHHHHh---CCCCeEEEEECCCC
Confidence 001111 111356666664211 01111 1245666543321 23468999999987
Q ss_pred CCCCCcC---ccccc---cC-CcCCCEEEeCcccccccCCeecCCCCceEecCCCCccccc---------------ccCc
Q 004713 229 VKTNPKN---AINEH---FL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSL---------------IEGE 286 (734)
Q Consensus 229 ~~~~~~~---~I~e~---lL-p~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl---------------~EgE 286 (734)
....... .+... ++ ...+|+|++||+|..+.. . ...+...+.+||.-...- ..++
T Consensus 190 ~~~~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~--~-~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (313)
T 1ute_A 190 WSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL--Q-DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGA 266 (313)
T ss_dssp SCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEE--E-CTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECC
T ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhc--c-CCCCceEEEECCCcCcCccccccccCCCcccceeccC
Confidence 6432111 11111 22 246999999999975432 1 122456777877643211 0011
Q ss_pred -cCCcEEEEEEEeCCceEEEEEECCCCCcEEEEE
Q 004713 287 -SKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTE 319 (734)
Q Consensus 287 -~~~Kgv~LVeI~~~~~~~e~IpL~tvRpf~~~e 319 (734)
....+|.+|+|.++.+.++++.+. -+++...+
T Consensus 267 ~~~~~gy~~l~v~~~~~~~~~~~~~-g~~~~~~~ 299 (313)
T 1ute_A 267 ENSLGGFAYVEITPKEMSVTYIEAS-GKSLFKTK 299 (313)
T ss_dssp TTSCCEEEEEEECSSCEEEEEEETT-SCEEEEEE
T ss_pred cCCCCceEEEEEEcCEEEEEEEcCC-CcEEEEEE
Confidence 123699999999889999999985 45554333
No 19
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.44 E-value=2.1e-12 Score=129.12 Aligned_cols=178 Identities=17% Similarity=0.245 Sum_probs=108.3
Q ss_pred CCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCC--hh--HHHHHHHHHHHhccC
Q 004713 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPS--RS--TLVKAIEILRRHCLN 85 (734)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs--~~--tl~~~~~lLr~l~~g 85 (734)
..||||+++||+|++ +..|+++++.+.+.++|+|+++||+++..... .. ....++++|+++
T Consensus 23 ~~mmki~~iSD~H~~------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~--- 87 (208)
T 1su1_A 23 NAMMKLMFASDIHGS------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--- 87 (208)
T ss_dssp --CCEEEEECCCTTB------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT---
T ss_pred cccEEEEEEEcCCCC------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhc---
Confidence 457999999999975 35788999988888999999999999864321 00 123455555532
Q ss_pred CCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccce
Q 004713 86 DRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEI 165 (734)
Q Consensus 86 d~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i 165 (734)
++||++|.||||... ...+.. |... ..
T Consensus 88 --------------------------------~~~v~~V~GNHD~~~-------~~~~~~------~~~~-------~~- 114 (208)
T 1su1_A 88 --------------------------------AHKVIAVRGNCDSEV-------DQMLLH------FPIT-------AP- 114 (208)
T ss_dssp --------------------------------GGGEEECCCTTCCHH-------HHHHSS------SCCC-------CS-
T ss_pred --------------------------------CCceEEEECCCchHH-------HHhhhh------cccc-------Cc-
Confidence 369999999999632 011110 1000 00
Q ss_pred eEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccccCCcC
Q 004713 166 TVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRF 245 (734)
Q Consensus 166 ~v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~~ 245 (734)
.. ++. -+..+|+++|+..... ..++ . +. .
T Consensus 115 -------------~~-----------------------~~~---------~~g~~i~l~Hg~~~~~---~~l~-~-~~-~ 143 (208)
T 1su1_A 115 -------------WQ-----------------------QVL---------LEKQRLFLTHGHLFGP---ENLP-A-LN-Q 143 (208)
T ss_dssp -------------EE-----------------------EEE---------CSSCEEEEECSSSSBT---TBCC-C-CC-T
T ss_pred -------------eE-----------------------EEE---------ECCcEEEEECCCCCCc---chhh-h-hc-C
Confidence 00 000 1346899999865321 1111 1 12 3
Q ss_pred CCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEE
Q 004713 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTE 319 (734)
Q Consensus 246 ~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~Kgv~LVeI~~~~~~~e~IpL~tvRpf~~~e 319 (734)
.|+|++||+|.+... .. .+..+++|||...-. ...+.+|++++. + .++.+.+.. .++....
T Consensus 144 ~d~vi~GHtH~~~~~--~~--~~~~~iNpGs~~~pr----~~~~~sy~il~~--~--~~~~~~~~~-~~~~~~~ 204 (208)
T 1su1_A 144 NDVLVYGHTHLPVAE--QR--GEIFHFNPGSVSIPK----GGNPASYGMLDN--D--VLSVIALND-QSIIAQV 204 (208)
T ss_dssp TCEEECCSSCCCEEE--EE--TTEEEEECCCSSCCC----TTCCCEEEEEET--T--EEEEEETTT-CCEEEEE
T ss_pred CCEEEECCcccCccE--Ee--CCEEEEECCCCcCCC----CCCCCEEEEEEC--C--eEEEEEeCC-CEEEEEe
Confidence 499999999997653 22 247899999985321 123578999984 3 466667753 3454433
No 20
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.41 E-value=2.3e-12 Score=134.01 Aligned_cols=214 Identities=18% Similarity=0.196 Sum_probs=112.9
Q ss_pred CCCCCCCCCCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHH
Q 004713 1 MGQQPREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILR 80 (734)
Q Consensus 1 ~~~~~~~~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr 80 (734)
||.++. ...+|+||+++||+|.. +.+|+++++.+...++|.|+++|||++....+. .++++|+
T Consensus 1 ~~~~~~-~~~~~~~i~~iSDiHg~------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~----~~~~~l~ 63 (270)
T 3qfm_A 1 MGHHHH-HHMDMTKIALLSDIHGN------------TTALEAVLADARQLGVDEYWLLGDILMPGTGRR----RILDLLD 63 (270)
T ss_dssp -----------CEEEEEECCCTTC------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSH----HHHHHHH
T ss_pred CCcccc-ccccccEEEEEecCCCC------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHH----HHHHHHH
Confidence 344333 45689999999999954 458999999999999999999999998764332 3556665
Q ss_pred HhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCC
Q 004713 81 RHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGS 160 (734)
Q Consensus 81 ~l~~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~ 160 (734)
++ .|+++|.||||.... ..+. +.. .|....
T Consensus 64 ~~------------------------------------~~~~~v~GNhD~~~~-------~~~~--~~~-~~~~~~---- 93 (270)
T 3qfm_A 64 QL------------------------------------PITARVLGNWEDSLW-------HGVR--KEL-DSTRPS---- 93 (270)
T ss_dssp TS------------------------------------CEEEECCCHHHHHHH-------HHHT--TCS-CTTSHH----
T ss_pred cc------------------------------------CCEEEEcCChHHHHH-------Hhhc--ccc-CCCcHH----
Confidence 31 279999999996421 1111 000 000000
Q ss_pred CccceeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhcc--chhhhhccCCCceEEEEEccCCCCCCCcCcc-
Q 004713 161 GVGEITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMR--PEAQEECQVSDWFNILVLHQNRVKTNPKNAI- 237 (734)
Q Consensus 161 ~~~~i~v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~--p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I- 237 (734)
... +. ...-|-.....++. +.|+. |.... . .-+.+.|+++|+...... ..++
T Consensus 94 ---~~~-----~~----~~~~~~~~~L~~~~----------~~~L~~LP~~~~-~-~~~g~~i~lvHg~p~~~~-~~~~~ 148 (270)
T 3qfm_A 94 ---QRY-----LL----RQCQYVLEEISLEE----------IEVLHNQPLQIH-R-QFGDLTVGISHHLPDKNW-GRELI 148 (270)
T ss_dssp ---HHH-----HH----HHHHHHHTTSCHHH----------HHHHHSCCSEEE-E-EETTEEEEEESSBTTBSS-SSTTS
T ss_pred ---HHH-----HH----HHHHHHHHHcCHHH----------HHHHHhCCCceE-E-EECCcEEEEEECCCCCCC-Cceec
Confidence 000 00 00000011111222 22321 11000 0 114578999997532110 0111
Q ss_pred c-------cccC-CcCCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccC---ccCCcEEEEEEEeCCc-eEEE
Q 004713 238 N-------EHFL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEG---ESKPKHVLLLEIKENQ-YRPT 305 (734)
Q Consensus 238 ~-------e~lL-p~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~Eg---E~~~Kgv~LVeI~~~~-~~~e 305 (734)
+ ..++ ...+|++++||+|.+... .. ..+..+++|||.-.-..... ......|+|+++.+++ ++++
T Consensus 149 ~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~--~~-~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~ 225 (270)
T 3qfm_A 149 HTGKQEEFDRLVTHPPCDIAVYGHIHQQLLR--YG-TGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMD 225 (270)
T ss_dssp TTCCHHHHHHTTTTTTCSEEECCSSCSEEEE--EC-TTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEE
T ss_pred CCCcHHHHHHHhcccCCCEEEECCcCchHhe--ec-cCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEE
Confidence 0 1122 347999999999986542 21 23578999999854221100 0125689999998765 5666
Q ss_pred EEEC
Q 004713 306 KIPL 309 (734)
Q Consensus 306 ~IpL 309 (734)
++.+
T Consensus 226 ~~rv 229 (270)
T 3qfm_A 226 FRRV 229 (270)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6544
No 21
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.39 E-value=1.2e-12 Score=126.69 Aligned_cols=89 Identities=12% Similarity=0.075 Sum_probs=56.4
Q ss_pred eEEEEEccCCCCCC-CcCccccccCCcCCCEEEeCcccccccCCeecCCCCceEecCCCCcccccccCccCC-cEEEEEE
Q 004713 219 FNILVLHQNRVKTN-PKNAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKP-KHVLLLE 296 (734)
Q Consensus 219 fnILvlHqn~~~~~-~~~~I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tSl~EgE~~~-Kgv~LVe 296 (734)
.+|+++|+...... ....+.+.+....+|++++||+|.+... .. .+..+++|||..... . ..+ .+|++++
T Consensus 78 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~--~~--~~~~~inpGs~~~~~--~--~~~~~~y~il~ 149 (176)
T 3ck2_A 78 TKIIQTHGHLFDINFNFQKLDYWAQEEEAAICLYGHLHVPSAW--LE--GKILFLNPGSISQPR--G--TIRECLYARVE 149 (176)
T ss_dssp EEEEEECSGGGTTTTCSHHHHHHHHHTTCSEEECCSSCCEEEE--EE--TTEEEEEECCSSSCC--T--TCCSCCEEEEE
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHhcCCCEEEECCcCCCCcE--EE--CCEEEEECCCCCcCC--C--CCCCCeEEEEE
Confidence 46777776543211 0111111122346899999999997652 22 246899999975321 1 233 7899999
Q ss_pred EeCCceEEEEEECCCCCcEE
Q 004713 297 IKENQYRPTKIPLTSVRPFE 316 (734)
Q Consensus 297 I~~~~~~~e~IpL~tvRpf~ 316 (734)
+.++.++++++++.. +++.
T Consensus 150 ~~~~~~~v~~~~~~~-~~~~ 168 (176)
T 3ck2_A 150 IDDSYFKVDFLTRDH-EVYP 168 (176)
T ss_dssp ECSSEEEEEEECTTS-CBCT
T ss_pred EcCCEEEEEEEEECC-EEcc
Confidence 998889999999863 4443
No 22
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.37 E-value=3.4e-12 Score=129.17 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=52.5
Q ss_pred ceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHH---hc--CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCC
Q 004713 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAE---QK--EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLND 86 (734)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~---e~--~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd 86 (734)
||||+++||+|.. +.+|+++++.+. .. ++|+||++|||++.. |... .+++.|+++.
T Consensus 1 mm~i~~isD~H~~------------~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g-~~~~---~~~~~l~~l~--- 61 (252)
T 1nnw_A 1 MVYVAVLANIAGN------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLF-PYPK---EVIEVIKDLT--- 61 (252)
T ss_dssp -CEEEEEECCTTC------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSS-SCHH---HHHHHHHHHH---
T ss_pred CcEEEEEeecCCC------------HHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCC-CCHH---HHHHHHHhhH---
Confidence 6999999999964 346778887776 76 899999999999875 3322 3555665542
Q ss_pred CCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004713 87 RPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (734)
Q Consensus 87 ~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p 131 (734)
...||++|+||||..
T Consensus 62 ------------------------------~~~~~~~v~GNhD~~ 76 (252)
T 1nnw_A 62 ------------------------------KKENVKIIRGKYDQI 76 (252)
T ss_dssp ------------------------------HHSCEEEECCHHHHH
T ss_pred ------------------------------hhcCeeEEecchHHH
Confidence 125799999999964
No 23
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.29 E-value=1.7e-11 Score=130.01 Aligned_cols=187 Identities=15% Similarity=0.041 Sum_probs=104.5
Q ss_pred CCCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCC
Q 004713 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDR 87 (734)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~ 87 (734)
...+.|||+++||+|..... | .-.++|+||++|||++... ...+..++++|+++
T Consensus 55 ~~~~~mri~~iSD~H~~~~~------------l-------~i~~~D~vi~aGDl~~~g~--~~e~~~~~~~L~~l----- 108 (296)
T 3rl5_A 55 KPAGHTRFVCISDTRSRTDG------------I-------QMPYGDILLHTGDFTELGL--PSEVKKFNDWLGNL----- 108 (296)
T ss_dssp CCTTEEEEEEEBCCTTCCTT------------C-------CCCSCSEEEECSCCSSSCC--HHHHHHHHHHHHTS-----
T ss_pred CCCCCeEEEEEeeCCCCcch------------h-------ccCCCCEEEECCcccCCCC--HHHHHHHHHHHHhC-----
Confidence 45678999999999998632 1 1147999999999999764 34456667777642
Q ss_pred CcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhh-----------------------
Q 004713 88 PVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILS----------------------- 144 (734)
Q Consensus 88 p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~----------------------- 144 (734)
...|+|+|+||||...... .+..+.
T Consensus 109 -----------------------------~~~~v~~V~GNHD~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (296)
T 3rl5_A 109 -----------------------------PYEYKIVIAGNHELTFDKE---FMADLVKQDYYRFPSVSKLKPEDFDNVQS 156 (296)
T ss_dssp -----------------------------CCSEEEECCCTTCGGGCHH---HHHHHTTSCGGGSHHHHTCCHHHHTTTGG
T ss_pred -----------------------------CCCeEEEEcCCcccccchh---hhhhhhcccccccccccccccchhhhHhh
Confidence 1257999999999853211 111110
Q ss_pred -hCCceeeccceeecCCCccceeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhhHhhccchhhhhccCCCceEEEE
Q 004713 145 -ACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILV 223 (734)
Q Consensus 145 -~~glVn~FGk~~l~~~~~~~i~v~Pill~kG~t~vaLyGL~~i~derL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILv 223 (734)
..|.+++-+ .-+.+ + .+.|||.++...-. ...|+.. ....+..... ..+....||+
T Consensus 157 l~~~~~~L~~--------------~~~~i--~--Gl~i~Gsp~tP~~~-~~~f~~~-~~~~~~~~~~---~ip~~~dILv 213 (296)
T 3rl5_A 157 LLTNSIYLQD--------------SEVTV--K--GFRIYGAPWTPWFN-GWGFNLP-RGQSLLDKWN---LIPEGTDILM 213 (296)
T ss_dssp GCTTSEECSS--------------EEEEE--T--TEEEEEECCBCC---CCTTBCC-TTHHHHHHHT---TSCTTCSEEE
T ss_pred hcCCeEEecC--------------CcEEE--C--CEEEEEecCCCCCC-CcCCCcc-hHHHHHHHHh---hCCCCCeEEE
Confidence 011111111 11222 2 37889987643211 0112110 0000000000 1235679999
Q ss_pred EccCCCCCCCc----------CccccccC-CcCCCEEEeCcccccccCCeecCCCCceEecCCCCc
Q 004713 224 LHQNRVKTNPK----------NAINEHFL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSV 278 (734)
Q Consensus 224 lHqn~~~~~~~----------~~I~e~lL-p~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v 278 (734)
.|++..+.... ..+-+.++ ....+|+++||+|..... .... +..+++|||.-
T Consensus 214 TH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~-~~~g--~t~vvNpGs~~ 276 (296)
T 3rl5_A 214 THGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGT-MTDG--YTTYINASTCT 276 (296)
T ss_dssp ESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEE-EECS--SCEEEECBCSC
T ss_pred ECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCce-EEEC--CEEEEECCcCC
Confidence 99987654211 01112221 356899999999997532 2222 46899999984
No 24
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.25 E-value=1.8e-11 Score=124.69 Aligned_cols=54 Identities=30% Similarity=0.388 Sum_probs=40.6
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHh
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRH 82 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l 82 (734)
++|||+++||+|.. +.+|+++++.+. ++|.|+++|||++... .. ..+++.|+.+
T Consensus 2 ~~mri~~isDiHg~------------~~~l~~~l~~~~--~~d~ii~~GDl~~~g~-~~---~~~~~~l~~~ 55 (246)
T 3rqz_A 2 NAMRILIISDVHAN------------LVALEAVLSDAG--RVDDIWSLGDIVGYGP-RP---RECVELVRVL 55 (246)
T ss_dssp CCCCEEEECCCTTC------------HHHHHHHHHHHC--SCSEEEECSCCSSSSS-CH---HHHHHHHHHH
T ss_pred CCcEEEEEeecCCC------------HHHHHHHHHhcc--CCCEEEECCCcCCCCC-CH---HHHHHHHHhc
Confidence 67999999999943 356778887765 9999999999998763 32 2455666653
No 25
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.20 E-value=7e-11 Score=127.41 Aligned_cols=262 Identities=12% Similarity=0.080 Sum_probs=132.5
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcc
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~ 90 (734)
..+||++++|||.|+.. .....+.+.+.+.+.++||||++||+|+....+... .+..+.+...
T Consensus 2 ~~l~f~~igD~g~g~~~--------q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d-~~~~~~f~~~-------- 64 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKG--------QILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLND-PAWKNLYEDV-------- 64 (342)
T ss_dssp CCEEEEECCSCBSCCHH--------HHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTC-THHHHHTTTT--------
T ss_pred ceEEEEEEecCCCCCch--------HHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCcc-HHHHHHHHHH--------
Confidence 36899999999998532 234556777888899999999999999874322110 0111222111
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhh---hCCc----------eeeccceee
Q 004713 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILS---ACNL----------VNYFGKMVL 157 (734)
Q Consensus 91 ~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~---~~gl----------Vn~FGk~~l 157 (734)
+. .++...++|+|+|.||||...... +-++.-. ..+- -....++.+
T Consensus 65 --------------~~-----~~~~~~~~P~~~vlGNHD~~~~~~--aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~ 123 (342)
T 3tgh_A 65 --------------YS-----EEKGDMYMPFFTVLGTRDWTGNYN--AQLLKGQGIYIEKNGETSIEKDADATNYPKWIM 123 (342)
T ss_dssp --------------SC-----CGGGTTCSEEEECCCHHHHTSCHH--HHHHHHHC---------------CCCSSCEEEC
T ss_pred --------------hh-----hhhhhhCCCEEEeCCCCccCCCch--HhhhhhhcccccccccccccccccccCCCCccC
Confidence 11 111135899999999999864321 1111110 0000 000111111
Q ss_pred cCCCcc---ceeE--EEEEEeeC--CeeEEEEecCCCCh-------HHHHhhhcChhhHhhccchhhhhccCCCceEEEE
Q 004713 158 GGSGVG---EITV--YPILIRKG--STAVALYGLGNIRD-------ERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILV 223 (734)
Q Consensus 158 ~~~~~~---~i~v--~Pill~kG--~t~vaLyGL~~i~d-------erL~~~f~~~~~v~~l~p~~~~~~~~~~~fnILv 223 (734)
++.-.. .+.+ .|.....| +..+.++.|....- ..-..... ..+.|+..... ...+.|++
T Consensus 124 P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~--~Ql~WLe~~L~-----~~~~~IV~ 196 (342)
T 3tgh_A 124 PNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWN--DLKSQLSVAKK-----IADFIIVV 196 (342)
T ss_dssp SSSSEEEEEEEEEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHH--HHHHHHHHHHH-----HCSEEEEE
T ss_pred CcceEEEEEEeeccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHH--HHHHHHHHhhc-----cCCcEEEE
Confidence 110000 0000 01111122 23567777764310 00011111 34677765431 23578999
Q ss_pred EccCCCCCCCc---Cccccc---cC-CcCCCEEEeCcccccccCCeecCCCCceEecCCCCcccc---cccC-----ccC
Q 004713 224 LHQNRVKTNPK---NAINEH---FL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATS---LIEG-----ESK 288 (734)
Q Consensus 224 lHqn~~~~~~~---~~I~e~---lL-p~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v~tS---l~Eg-----E~~ 288 (734)
.|++....+.. ..+... ++ ..++|+|++||.|..+.. ... +...+..|+.-... .... ...
T Consensus 197 ~HhP~~~~~~~~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~--~~~--g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~ 272 (342)
T 3tgh_A 197 GDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVI--EDN--DMAHITCGSGSMSQGKSGMKNSKSLFFSS 272 (342)
T ss_dssp CSSCSSCSSTTCCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEE--EET--TEEEEEECCSSCCCCCCSSCCTTEEEEEC
T ss_pred ECCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCcceeEE--eeC--CcEEEEeCccccccccCCCCCCcceeecC
Confidence 99987643321 111111 22 357999999999987543 122 23333334321110 0000 025
Q ss_pred CcEEEEEEEeCCceEEEEEECCCCCcEEEEEEE
Q 004713 289 PKHVLLLEIKENQYRPTKIPLTSVRPFEYTEII 321 (734)
Q Consensus 289 ~Kgv~LVeI~~~~~~~e~IpL~tvRpf~~~eI~ 321 (734)
+.||.++++.++.+.++++....-+.+...+|.
T Consensus 273 ~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~ 305 (342)
T 3tgh_A 273 DIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLN 305 (342)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTTEEEEEEEEE
T ss_pred CCcEEEEEEECCEEEEEEEECCCCcEEEEEEEE
Confidence 679999999999999999984445555444443
No 26
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.17 E-value=3.1e-11 Score=118.55 Aligned_cols=81 Identities=15% Similarity=0.049 Sum_probs=54.2
Q ss_pred ceEEEEEcCCCCCCCCCchhch-hcHHHHHHHHHHHHHh--cCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCC
Q 004713 12 TVRILVATDCHLGYMEKDEIRR-HDSFEAFEEICSIAEQ--KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRP 88 (734)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~~R~-~Ds~~aFeeIl~~A~e--~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p 88 (734)
.|||+++||+|+|+......+. .+....++.+++.+.+ .++|+|+++|||++.. +... .++++|+++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-~~~~---~~~~~l~~l------ 70 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-NDKN---EYLRIWKAL------ 70 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-CCTT---SHHHHHHHS------
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-hhHH---HHHHHHHHC------
Confidence 3899999999999753211111 1112245566677766 4899999999999875 3322 355566542
Q ss_pred cceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004713 89 VQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (734)
Q Consensus 89 ~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p 131 (734)
..|+++|+||||..
T Consensus 71 -----------------------------~~~~~~v~GNhD~~ 84 (195)
T 1xm7_A 71 -----------------------------PGRKILVMGNHDKD 84 (195)
T ss_dssp -----------------------------SSEEEEECCTTCCC
T ss_pred -----------------------------CCCEEEEeCCCCCc
Confidence 35899999999974
No 27
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=98.98 E-value=1.1e-08 Score=112.12 Aligned_cols=78 Identities=19% Similarity=-0.000 Sum_probs=51.2
Q ss_pred CCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCC---hhHHHHHHHHHHHhc
Q 004713 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPS---RSTLVKAIEILRRHC 83 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~--~VD~VLiaGDLFd~~kPs---~~tl~~~~~lLr~l~ 83 (734)
....+||++++|+|.++. ...+ ++.+.+. ++|+||++||++...... ......+.+.|+.+
T Consensus 123 ~~~~~~f~~~gD~~~~~~---------~~~~----l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l- 188 (426)
T 1xzw_A 123 PDVPYVFGLIGDIGQTHD---------SNTT----LTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS- 188 (426)
T ss_dssp TTCCEEEEEECSCTTBHH---------HHHH----HHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEEEeCCCCCc---------hHHH----HHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHH-
Confidence 457899999999998731 2223 3333444 899999999999754321 12222233444432
Q ss_pred cCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 004713 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (734)
Q Consensus 84 ~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~ 132 (734)
...+|+|++.||||...
T Consensus 189 --------------------------------~~~~P~~~v~GNHD~~~ 205 (426)
T 1xzw_A 189 --------------------------------VAYQPWIWTAGNHEIDY 205 (426)
T ss_dssp --------------------------------HTTSCEECCCCGGGCCC
T ss_pred --------------------------------HhcCCEEEecccccccc
Confidence 24789999999999864
No 28
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=98.96 E-value=6.2e-09 Score=113.89 Aligned_cols=78 Identities=18% Similarity=0.040 Sum_probs=51.0
Q ss_pred CCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCC---hhHHHHHHHHHHHhc
Q 004713 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPS---RSTLVKAIEILRRHC 83 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~--~VD~VLiaGDLFd~~kPs---~~tl~~~~~lLr~l~ 83 (734)
....|||++++|+|+++. .+. +++.+.+. ++|+||++||++...... ........+.|+.+
T Consensus 116 ~~~~~~f~~igD~~~~~~---------~~~----~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~- 181 (424)
T 2qfp_A 116 LDVPYTFGLIGDLGQSFD---------SNT----TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS- 181 (424)
T ss_dssp TTCCEEEEEECSCTTBHH---------HHH----HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEEEeCCCCCC---------hHH----HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHH-
Confidence 457899999999999742 122 34444444 899999999999865321 11122233333332
Q ss_pred cCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 004713 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (734)
Q Consensus 84 ~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~ 132 (734)
...+|+|++.||||...
T Consensus 182 --------------------------------~~~~P~~~v~GNHD~~~ 198 (424)
T 2qfp_A 182 --------------------------------VAYQPWIWTAGNHEIEF 198 (424)
T ss_dssp --------------------------------HTTSCEEECCCHHHHCC
T ss_pred --------------------------------HhcCCeEeecCCccccc
Confidence 23589999999999753
No 29
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.83 E-value=2.5e-08 Score=112.29 Aligned_cols=205 Identities=16% Similarity=0.185 Sum_probs=98.5
Q ss_pred CCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc----CC-CEEEEcCCCCCCCCCChhH---HHHHHHHHH
Q 004713 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK----EV-DFVLLGGDLFHENKPSRST---LVKAIEILR 80 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~----~V-D~VLiaGDLFd~~kPs~~t---l~~~~~lLr 80 (734)
....|+|||++|+|..+..... ..-.+..+..+++.++++ ++ ++||.+||+|+.. | ... ....+++|+
T Consensus 5 ~~~~l~Il~~~D~H~~~~~~~~--~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~-~-~~~~~~~~~~~~~ln 80 (516)
T 1hp1_A 5 KTYKITVLHTNDHHGHFWRNEY--GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-P-ESDLQDAEPDFRGMN 80 (516)
T ss_dssp CCEEEEEEEECCCTTCCSCCTT--SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSC-H-HHHTTTTHHHHHHHH
T ss_pred CceEEEEEEecccccCccCCCC--CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCc-c-hhhhcCCcHHHHHHh
Confidence 3456999999999987543211 111233444555544433 56 7999999999753 2 111 112344444
Q ss_pred HhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCC
Q 004713 81 RHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGS 160 (734)
Q Consensus 81 ~l~~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~ 160 (734)
.+ + +.+++.||||...+...+ ...+..+++ .+++......
T Consensus 81 ~l-----------------------------------g-~d~~~~GNHEfd~g~~~l--~~~~~~~~~-~~l~aNv~~~- 120 (516)
T 1hp1_A 81 LV-----------------------------------G-YDAMAIGNHEFDNPLTVL--RQQEKWAKF-PLLSANIYQK- 120 (516)
T ss_dssp HH-----------------------------------T-CCEEECCGGGGSSCHHHH--HHHHHHCSS-CEECSSEEET-
T ss_pred cc-----------------------------------C-CCEEeeccccccCCHHHH--HHHHhhCCC-CEEEeEEEEC-
Confidence 32 2 236789999986653211 133444432 1111100000
Q ss_pred CccceeEEE-EEEeeCCeeEEEEecCCCChHHHH-------hhhcCh-hhHhhccchhhhhccCCCceEEEEEccCCCCC
Q 004713 161 GVGEITVYP-ILIRKGSTAVALYGLGNIRDERLN-------RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVKT 231 (734)
Q Consensus 161 ~~~~i~v~P-ill~kG~t~vaLyGL~~i~derL~-------~~f~~~-~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~ 231 (734)
....-.+.| .++..++.+|+|.|+....-..+. -.|.++ ..++...++... .....+.|++.|......
T Consensus 121 ~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~~l~~--~~~~d~iI~l~H~g~~~~ 198 (516)
T 1hp1_A 121 STGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQ--TEKPDIIIAATHMGHYDN 198 (516)
T ss_dssp TTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHHHHHH--HTCCSEEEEEEESCCCGG
T ss_pred CCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcEEeCHHHHHHHHHHHHHh--cCCCCEEEEEecCCccCC
Confidence 000001123 345677899999998432100000 001110 001111111110 013568999999976321
Q ss_pred C--CcC-----ccccccCCcCCCEEEeCccccccc
Q 004713 232 N--PKN-----AINEHFLPRFLDFVVWGHEHECLI 259 (734)
Q Consensus 232 ~--~~~-----~I~e~lLp~~~DyVa~GH~H~~~i 259 (734)
. +.+ .+...+-...+|+|+.||.|..+.
T Consensus 199 ~~~~~~~~~~~~la~~~~~~~iDlilgGHtH~~~~ 233 (516)
T 1hp1_A 199 GEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVC 233 (516)
T ss_dssp GCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCC
T ss_pred CcccccCchHHHHHHhCCCCceeEEECCCCCcccc
Confidence 1 000 011112223599999999998654
No 30
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.81 E-value=1.5e-08 Score=114.24 Aligned_cols=217 Identities=18% Similarity=0.192 Sum_probs=110.0
Q ss_pred CceEEEEEcCCCCCCCCCch------hchhcHHHHHHHHHHHHHhcCCCEEEE-cCCCCCCCCCChhHH---HHHHHHHH
Q 004713 11 NTVRILVATDCHLGYMEKDE------IRRHDSFEAFEEICSIAEQKEVDFVLL-GGDLFHENKPSRSTL---VKAIEILR 80 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~------~R~~Ds~~aFeeIl~~A~e~~VD~VLi-aGDLFd~~kPs~~tl---~~~~~lLr 80 (734)
..++|||++|+|-.+...+. ....-.+..+..+++.+++++++.|++ +||+|+.+ ....+ ...+++|.
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~--~~~~~~~g~~~~~~ln 82 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP--YISSLTKGKAIIDIMN 82 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS--HHHHTTTTHHHHHHHT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc--hhhhhcCChHHHHHHH
Confidence 46999999999944332210 011113667888888889999998888 99999853 11111 11222221
Q ss_pred HhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceee-cC
Q 004713 81 RHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVL-GG 159 (734)
Q Consensus 81 ~l~~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l-~~ 159 (734)
..++. +++.||||...|...+ .+.+..+++ .+++.... ..
T Consensus 83 -----------------------------------~lg~D-~~tlGNHEfd~G~~~l--~~~l~~~~~-p~l~aNv~~~~ 123 (509)
T 3ive_A 83 -----------------------------------TMPFD-AVTIGNHEFDHGWDNT--LLQLSQAKF-PIVQGNIFYQN 123 (509)
T ss_dssp -----------------------------------TSCCS-EECCCGGGGTTCHHHH--HHHHTTCSS-CBCCCSEEETT
T ss_pred -----------------------------------hcCCc-EEeecccccccCHHHH--HHHHhhCCC-CEEEEEEEECC
Confidence 12333 5567999976553322 234444432 11111000 00
Q ss_pred CCccceeEEE-EEEeeCCeeEEEEecCCCC-------hHHH-HhhhcCh-hhHhhccchhhhhccCCCceEEEEEccCCC
Q 004713 160 SGVGEITVYP-ILIRKGSTAVALYGLGNIR-------DERL-NRMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRV 229 (734)
Q Consensus 160 ~~~~~i~v~P-ill~kG~t~vaLyGL~~i~-------derL-~~~f~~~-~~v~~l~p~~~~~~~~~~~fnILvlHqn~~ 229 (734)
.+ ..+-..| +++..++.+|+|+|+-... .... .-.|.++ ..++...++. .....+-|++.|....
T Consensus 124 ~~-~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~L----k~~~D~iIvl~H~G~~ 198 (509)
T 3ive_A 124 SS-KSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDEL----KGKVDLTVALIHEGVP 198 (509)
T ss_dssp SC-CBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHH----TTTCSEEEEEEECSSC
T ss_pred CC-CccCcCCeEEEEECCEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHH----HhcCCEEEEEeccCcC
Confidence 00 0000123 3456788999999983210 0000 0011111 0011111111 1124588999999754
Q ss_pred CCCCcC---c----cc-----cccCCcCCCEEEeCcccccccCCeecCCCCceEecCCC
Q 004713 230 KTNPKN---A----IN-----EHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGS 276 (734)
Q Consensus 230 ~~~~~~---~----I~-----e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS 276 (734)
...... . .. ...++ ++|+|+.||.|.....|..+. +..++|+|+
T Consensus 199 ~~~~~~~~~~~~~~~~~d~~la~~~~-giDlIlgGHtH~~~~~~~~~~--~~~ivqag~ 254 (509)
T 3ive_A 199 ARQSSMGGTDVRRALDKDIQTASQVK-GLDILITGHAHVGTPEPIKVG--NTLILSTDS 254 (509)
T ss_dssp CCCCCC---CCCCCCHHHHHHHHHCS-SCCEEEEESSCCCCSSCEEET--TEEEECCCS
T ss_pred CccccccccccccccchHHHHHhcCC-CCcEEEeCCcCccCCCCeeeC--CEEEEecCh
Confidence 321100 0 00 01223 699999999998766555443 467888875
No 31
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.77 E-value=3.5e-08 Score=112.86 Aligned_cols=186 Identities=17% Similarity=0.206 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHhc--C--CC-EEEEcCCCCCCCCCChhHH---HHHHHHHHHhccCCCCcceeeechhhhhcccccCccc
Q 004713 38 EAFEEICSIAEQK--E--VD-FVLLGGDLFHENKPSRSTL---VKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVN 109 (734)
Q Consensus 38 ~aFeeIl~~A~e~--~--VD-~VLiaGDLFd~~kPs~~tl---~~~~~lLr~l~~gd~p~~~e~lSd~~~~F~~~f~~lN 109 (734)
..+..+++.++++ + +| +||.+||+|+... .... ..++++|+.+
T Consensus 105 arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~--~~~~~~g~~~~~~ln~l--------------------------- 155 (562)
T 2wdc_A 105 GALTALIRDQKARVEAEGGKALVLDGGDTWTNSG--LSLLTRGEAVVRWQNLV--------------------------- 155 (562)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH--HHHHHTTHHHHHHHHHH---------------------------
T ss_pred HHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch--hhhhhCCHHHHHHHHhh---------------------------
Confidence 4555677777665 4 89 8999999998642 1111 2344455432
Q ss_pred cCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccceeecCCCccceeEEE-EEEeeCCeeEEEEecCCCC
Q 004713 110 YEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYP-ILIRKGSTAVALYGLGNIR 188 (734)
Q Consensus 110 y~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~v~P-ill~kG~t~vaLyGL~~i~ 188 (734)
+.+++ + ||||...+...+ ...+...++ .++...... ...+.-.+.| +++..++.+|+|+|+-...
T Consensus 156 --------g~d~~-~-GNHEfd~G~~~l--~~~l~~~~~-p~L~aNv~~-~~~~~~~~~py~i~e~~G~kIgiiG~~~~~ 221 (562)
T 2wdc_A 156 --------GVDHM-V-SHWEWTLGRERV--EELLGLFRG-EFLSYNIVD-DLFGDPLFPAYRIHRVGPYALAVVGASYPY 221 (562)
T ss_dssp --------TCCEE-C-CSGGGGGCHHHH--HHHHHHCCS-EECCSSCEE-TTTCCBSSCSEEEEEETTEEEEEEEECCTT
T ss_pred --------CCcEE-e-cchhcccCHHHH--HHHHHhCCC-CEEEEEEEe-cCCCCcccCCeEEEEECCeEEEEEeeccCc
Confidence 45664 6 999976543221 234444442 222210000 0000111234 2446778999999985432
Q ss_pred hHHHH-------hhhcCh-hhHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccccCCcCCCEEEeCcccccccC
Q 004713 189 DERLN-------RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFVVWGHEHECLID 260 (734)
Q Consensus 189 derL~-------~~f~~~-~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~~~DyVa~GH~H~~~i~ 260 (734)
-.... -.|.+. ..++...++... ....+.|++.|...... ..+... + .++|+|+.||.|.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~~d---~~la~~-~-~giDlIlgGHtH~~~~~ 293 (562)
T 2wdc_A 222 VKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQLD---AALAER-I-RGIDLILSGHTHDLTPR 293 (562)
T ss_dssp HHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHHHH---HHHHTT-S-SSCCEEEECSSCCCCSS
T ss_pred ccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCcch---HHHHhc-C-CCCcEEEeCCCCCCCcc
Confidence 11000 001110 011111111110 13568899999863210 011111 2 37999999999998765
Q ss_pred CeecCCCCceEecCCC
Q 004713 261 PQEVPGMGFHLTQPGS 276 (734)
Q Consensus 261 Pq~~~~~~~~I~yPGS 276 (734)
|..+ + +..|+++|+
T Consensus 294 ~~~~-~-~t~vvqag~ 307 (562)
T 2wdc_A 294 PWRV-G-KTWIVAGSA 307 (562)
T ss_dssp CEEE-T-TEEEEECCS
T ss_pred CEEE-C-CEEEEecCc
Confidence 5444 2 467888886
No 32
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.77 E-value=2.4e-08 Score=113.64 Aligned_cols=201 Identities=15% Similarity=0.152 Sum_probs=103.1
Q ss_pred CCCceEEEEEcCCCCCCCCCch-hc--h--hcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCCCCChhHH---HHHHHHH
Q 004713 9 IANTVRILVATDCHLGYMEKDE-IR--R--HDSFEAFEEICSIAEQKEVD-FVLLGGDLFHENKPSRSTL---VKAIEIL 79 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~-~R--~--~Ds~~aFeeIl~~A~e~~VD-~VLiaGDLFd~~kPs~~tl---~~~~~lL 79 (734)
....++|||++|+|........ .+ . .-.+..+..+++.++++++| +||.+||+|+.... ..+ ...+++|
T Consensus 26 ~~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~--~~~~~~~~~~~~l 103 (552)
T 2z1a_A 26 GGFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY--FNQYRGLADRYFM 103 (552)
T ss_dssp --CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH--HHHHTTHHHHHHH
T ss_pred CCeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH--HHHhCCcHHHHHH
Confidence 4457999999999965432200 00 0 11356778888888888898 88999999986421 111 1233333
Q ss_pred HHhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeeccc-eeec
Q 004713 80 RRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGK-MVLG 158 (734)
Q Consensus 80 r~l~~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk-~~l~ 158 (734)
+. .+. .+++.||||...+...+ ...+...++ .+++. ....
T Consensus 104 n~-----------------------------------lg~-d~~~lGNHEfd~g~~~l--~~~l~~~~~-~~L~aNv~~~ 144 (552)
T 2z1a_A 104 HR-----------------------------------LRY-RAMALGNHEFDLGPGPL--ADFLKGARF-KVVSANVDAS 144 (552)
T ss_dssp HH-----------------------------------TTC-CEEECCGGGGTTCHHHH--HHHHTTCCS-EEECTTEECT
T ss_pred Hh-----------------------------------cCC-CccccccccccCCHHHH--HHHHhhCCC-CEEEEEEecC
Confidence 32 122 36788999987653221 234554443 22221 1000
Q ss_pred CC-CccceeEEE-EEEeeCCeeEEEEecCCCChHHHHh-----hhcCh-hhHhhccchhhhhccCCCceEEEEEccCCCC
Q 004713 159 GS-GVGEITVYP-ILIRKGSTAVALYGLGNIRDERLNR-----MFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVK 230 (734)
Q Consensus 159 ~~-~~~~i~v~P-ill~kG~t~vaLyGL~~i~derL~~-----~f~~~-~~v~~l~p~~~~~~~~~~~fnILvlHqn~~~ 230 (734)
+. .... .+.| +++..++.+|+|+|+-...-..+.. .|.++ ..++...++... ....+.|++.|.....
T Consensus 145 ~~~~~~~-~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~ 220 (552)
T 2z1a_A 145 REPRLKG-LFAPYAVVVVGGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE 220 (552)
T ss_dssp TCGGGTT-SCBSEEEEEETTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH
T ss_pred CCccccc-ccCCeEEEEECCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcch
Confidence 00 0000 0223 2456678899999985432111000 01110 011111111110 1356889999986421
Q ss_pred CCCcCccccccCCcCCCEEEeCccccccc
Q 004713 231 TNPKNAINEHFLPRFLDFVVWGHEHECLI 259 (734)
Q Consensus 231 ~~~~~~I~e~lLp~~~DyVa~GH~H~~~i 259 (734)
. ..+... + .++|+|+.||.|..+.
T Consensus 221 d---~~la~~-~-~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 221 D---LKLARR-L-VGVQVIVGGHSHTLLG 244 (552)
T ss_dssp H---HHHHTT-C-SSCCEEEECSSCCCBS
T ss_pred H---HHHHHh-C-CCccEEEeCCcCcccc
Confidence 0 001111 2 4699999999999764
No 33
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.62 E-value=2.5e-07 Score=104.73 Aligned_cols=218 Identities=18% Similarity=0.263 Sum_probs=110.2
Q ss_pred CCCceEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCCCCChhHH-------HHHH
Q 004713 9 IANTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHENKPSRSTL-------VKAI 76 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~----R~~Ds~~aFeeIl~~A~e~~VD-~VLiaGDLFd~~kPs~~tl-------~~~~ 76 (734)
....++|||++|+|-.+...+-. ...-.+..+..+++.++++.++ ++|.+||+|+.. |-...+ ...+
T Consensus 16 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs-~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 16 QGSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGS-PFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp --CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSS-HHHHHHHHTTCSSHHHH
T ss_pred CCCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCc-HHHHHHhhcccCcchHH
Confidence 34679999999999655332210 1112356778888888888887 667799999854 221111 2334
Q ss_pred HHHHHhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCceeecccee
Q 004713 77 EILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMV 156 (734)
Q Consensus 77 ~lLr~l~~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~ 156 (734)
++|+. .++. +++.||||...+...+ .+.+...++- +++...
T Consensus 95 ~~ln~-----------------------------------lg~D-~~t~GNHefd~G~~~l--~~~~~~~~~p-~l~aNv 135 (527)
T 3qfk_A 95 DFYNR-----------------------------------MAFD-FGTLGNHEFNYGLPYL--KDTLRRLNYP-VLCANI 135 (527)
T ss_dssp HHHHH-----------------------------------TCCC-EECCCGGGGTTCHHHH--HHHHHHCSSC-BCCSSE
T ss_pred HHHHh-----------------------------------cCCc-EEeccccccccCHHHH--HHHHHhCCCC-EEEeEe
Confidence 44433 2444 4568999976554322 2344443321 111100
Q ss_pred ecCCCccceeEEE-EEEeeCCeeEEEEecCCCC------hHHHHh-hhcCh-hhHhhccchhhhhccCCCceEEEEEccC
Q 004713 157 LGGSGVGEITVYP-ILIRKGSTAVALYGLGNIR------DERLNR-MFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQN 227 (734)
Q Consensus 157 l~~~~~~~i~v~P-ill~kG~t~vaLyGL~~i~------derL~~-~f~~~-~~v~~l~p~~~~~~~~~~~fnILvlHqn 227 (734)
... + ..+-..| .++..++.+|+|.|+-... ...... .|.++ ..++...++... ...+-|++.|..
T Consensus 136 ~~~-g-~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~~----~~D~iIvl~H~G 209 (527)
T 3qfk_A 136 YEN-D-STLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKR----HADIIVVCYHGG 209 (527)
T ss_dssp EET-T-EESSSCSEEEEEETTEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHHH----HCSEEEEEEECC
T ss_pred eeC-C-CCccCCCEEEEEECCEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHHh----CCCEEEEEeCcC
Confidence 000 0 0000012 3456788999999985421 110000 11111 011111111111 245789999986
Q ss_pred CCCCC--C--cCccc-c----ccC---CcCCCEEEeCcccccccCCeecCCCCceEecCCC
Q 004713 228 RVKTN--P--KNAIN-E----HFL---PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGS 276 (734)
Q Consensus 228 ~~~~~--~--~~~I~-e----~lL---p~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS 276 (734)
..... + ...+. + .+. ..++|+|+.||.|..+. ..+. +..|++||+
T Consensus 210 ~~~d~~~~~~~~~~~~e~~~~~la~~~~~giDlIlgGHtH~~~~--~~v~--~~~ivqag~ 266 (527)
T 3qfk_A 210 FEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIA--ERFK--QTAVIQPGT 266 (527)
T ss_dssp CSBCTTTCCBSSCCSSSCCHHHHHHHHGGGCSEEECCSSCCEEE--EEET--TEEEEEECS
T ss_pred cccccccCccccccccchHHHHHHHhcCCCCcEEEECCCCcccc--eEEC--CEEEeccCh
Confidence 54211 0 00000 0 122 25799999999999764 3333 468888886
No 34
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.54 E-value=2e-07 Score=105.98 Aligned_cols=58 Identities=16% Similarity=0.109 Sum_probs=39.8
Q ss_pred CCCCceEEEEEcCCCCCCCCCchhc--------hhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCC
Q 004713 8 DIANTVRILVATDCHLGYMEKDEIR--------RHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHEN 65 (734)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d~~R--------~~Ds~~aFeeIl~~A~e~~V-D~VLiaGDLFd~~ 65 (734)
...-.++|||++|+|..+...+... ..-.+..+..+++.++++.+ ++||.+||+|+..
T Consensus 21 ~~~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~ 87 (546)
T 4h2g_A 21 PDPWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGT 87 (546)
T ss_dssp --CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS
T ss_pred CCceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCc
Confidence 3445799999999996554322110 11135677788888888777 5999999999865
No 35
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.47 E-value=2.3e-07 Score=106.34 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=39.2
Q ss_pred CCCceEEEEEcCCCCCCCCCch---hc------hhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 004713 9 IANTVRILVATDCHLGYMEKDE---IR------RHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~---~R------~~Ds~~aFeeIl~~A~e~~VD-~VLiaGDLFd~~ 65 (734)
..-.++|||++|+|-.+...+. .. ..-.+..+..+++.++++.++ ++|.+||+|+..
T Consensus 9 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs 75 (579)
T 3ztv_A 9 KAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGT 75 (579)
T ss_dssp CCEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSS
T ss_pred CceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCc
Confidence 3456999999999954433210 00 011266777888888888777 889999999865
No 36
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.46 E-value=4.5e-06 Score=89.83 Aligned_cols=55 Identities=18% Similarity=0.224 Sum_probs=37.8
Q ss_pred CceEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 004713 11 NTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~----R~~Ds~~aFeeIl~~A~e~~VD-~VLiaGDLFd~~ 65 (734)
-.++|||++|+|-.+...+.. ...-.+..+..+++.++++.++ ++|.+||+|..+
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs 66 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGS 66 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCc
Confidence 468999999999765443211 1112356677778888888776 668899999743
No 37
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.39 E-value=3.6e-06 Score=90.62 Aligned_cols=57 Identities=19% Similarity=0.265 Sum_probs=37.6
Q ss_pred CCCceEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 004713 9 IANTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~----R~~Ds~~aFeeIl~~A~e~~VD-~VLiaGDLFd~~ 65 (734)
..-.++|||++|+|-.+...+.. ...-.+..+..+++.++++.++ ++|.+||+|...
T Consensus 8 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs 69 (341)
T 3gve_A 8 PQVHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGN 69 (341)
T ss_dssp CEEEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS
T ss_pred CceEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCc
Confidence 34469999999999665433210 0111355667777778777776 556799999754
No 38
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=97.97 E-value=2e-06 Score=85.81 Aligned_cols=46 Identities=17% Similarity=0.162 Sum_probs=36.7
Q ss_pred CCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCC
Q 004713 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENK 66 (734)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~-~VD~VLiaGDLFd~~k 66 (734)
...+|||+++||+|-. +.+|+++++.+... ++|.|+++||+++...
T Consensus 9 ~~~~~~i~visDiHg~------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~ 55 (221)
T 1g5b_A 9 GSKYRNIWVVGDLHGC------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGA 55 (221)
T ss_dssp GGGCSCEEEECCCTTC------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSS
T ss_pred CCCCceEEEEEcCCCC------------HHHHHHHHHHccCCCCCCEEEEeCCccCCCC
Confidence 3457999999999932 45788888877653 7999999999998763
No 39
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.94 E-value=1.3e-05 Score=91.65 Aligned_cols=60 Identities=18% Similarity=0.223 Sum_probs=36.5
Q ss_pred CCCCCCCceEEEEEcCCCCCCCCCch--h-ch-hcHHHHHHHHHHHH-HhcCCCE-EEEcCCCCCC
Q 004713 5 PREDIANTVRILVATDCHLGYMEKDE--I-RR-HDSFEAFEEICSIA-EQKEVDF-VLLGGDLFHE 64 (734)
Q Consensus 5 ~~~~~~~~mRILh~SD~HLG~~e~d~--~-R~-~Ds~~aFeeIl~~A-~e~~VD~-VLiaGDLFd~ 64 (734)
-+......++|||++|+|-....... . .. .-.+..|-..++.. .++++|. +|.+||+|+.
T Consensus 8 ~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~G 73 (557)
T 3c9f_A 8 HRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDG 73 (557)
T ss_dssp BCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSS
T ss_pred CCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCC
Confidence 34455678999999999987543210 0 00 01134444444432 3577884 7999999975
No 40
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.83 E-value=1e-05 Score=83.54 Aligned_cols=43 Identities=23% Similarity=0.374 Sum_probs=34.8
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCC
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENKP 67 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~V-D~VLiaGDLFd~~kP 67 (734)
+||+++||+| |. +..|+++++.+....+ |.||++||+++....
T Consensus 19 ~~i~visDiH-g~-----------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~ 62 (262)
T 2qjc_A 19 GRVIIVGDIH-GC-----------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPD 62 (262)
T ss_dssp SCEEEECCCT-TC-----------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSSC
T ss_pred CeEEEEeCCC-CC-----------HHHHHHHHHHHhccCCCCEEEEecCCCCCCCC
Confidence 4999999999 42 4578888888876664 999999999997643
No 41
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.75 E-value=0.00028 Score=74.24 Aligned_cols=191 Identities=14% Similarity=0.134 Sum_probs=99.6
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCc
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~-~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~ 89 (734)
..||||+++|+| |++ -+..+...+...+++ ++|++++.||-+-...+-.. ...+.|..
T Consensus 3 ~~m~ilf~GDv~-G~~---------G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~---~~~~~ln~-------- 61 (281)
T 1t71_A 3 NSIKFIFLGDVY-GKA---------GRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSL---KHYEFLKE-------- 61 (281)
T ss_dssp CCCEEEEECEEB-HHH---------HHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCH---HHHHHHHH--------
T ss_pred ceEEEEEECCcC-ChH---------HHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCH---HHHHHHHh--------
Confidence 459999999999 542 234455556665554 68999998887655444322 34444443
Q ss_pred ceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCce---eeccceeecCCCcccee
Q 004713 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLV---NYFGKMVLGGSGVGEIT 166 (734)
Q Consensus 90 ~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glV---n~FGk~~l~~~~~~~i~ 166 (734)
.++-++++ |||+.-.+.+ .++.|.....+ ||- . ..... . .
T Consensus 62 ---------------------------~G~Da~Tl-GNHefD~g~~---~~~~l~~~~~v~~aN~p-~---~~~~~-~-~ 104 (281)
T 1t71_A 62 ---------------------------AGVNYITM-GNHTWFQKLD---LAVVINKKDLVRPLNLD-T---SFAFH-N-L 104 (281)
T ss_dssp ---------------------------HTCCEEEC-CTTTTCCGGG---HHHHTTCTTEECBSCBC-T---TSTTT-T-S
T ss_pred ---------------------------cCCCEEEE-ccCcccCCcc---HHHHhhhcCEEeeccCC-c---ccccc-c-C
Confidence 24555555 9999877621 12233321111 110 0 00000 0 0
Q ss_pred EEE-EEEeeCCeeEEEEecC----CCChHHHHhhhcChh-hHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccc
Q 004713 167 VYP-ILIRKGSTAVALYGLG----NIRDERLNRMFQTPH-AVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEH 240 (734)
Q Consensus 167 v~P-ill~kG~t~vaLyGL~----~i~derL~~~f~~~~-~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~ 240 (734)
..| .++..++.+|+|.|+- ++. -.|.++. .++.+..+ ..-.+-|++.|.... .....-..
T Consensus 105 g~g~~I~e~~G~kIgVIgl~g~~~f~~-----~~~~~pf~~a~~~v~~------~~~diIIv~~H~g~t---~Ek~~la~ 170 (281)
T 1t71_A 105 GQGSLVFEFNKAKIRITNLLGTSVPLP-----FKTTNPFKVLKELILK------RDCDLHIVDFHAETT---SEKNAFCM 170 (281)
T ss_dssp SBSEEEEECSSCEEEEEEEECTTSCCS-----SCBCCHHHHHHHHHTT------CCCSEEEEEEECSCH---HHHHHHHH
T ss_pred CCCeEEEEECCEEEEEEEeeccccccC-----ccccCHHHHHHHHHhh------cCCCEEEEEeCCCch---HHHHHHHH
Confidence 012 3456778899998863 221 0112110 11111111 134578999996421 00000112
Q ss_pred cCCcCCCEEEeCcccccccCCeecCCCCceEec
Q 004713 241 FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQ 273 (734)
Q Consensus 241 lLp~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~y 273 (734)
.++..+|+|+-||.|.....|+.+++...++..
T Consensus 171 ~~dg~VD~VvGgHTHv~t~d~~il~~gt~~i~d 203 (281)
T 1t71_A 171 AFDGYVTTIFGTHTHVPSADLRITPKGSAYITD 203 (281)
T ss_dssp HHTTTSSEEEEESSSSCCTTCEECTTSCEEESC
T ss_pred hCCCCeEEEEeCCCCcCCCceEEecCCcEEEec
Confidence 355679999999999988776665443334443
No 42
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.72 E-value=1.7e-05 Score=83.04 Aligned_cols=68 Identities=22% Similarity=0.258 Sum_probs=50.5
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcce
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ-KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e-~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~~ 91 (734)
|||++++|+|-. +..|+++++.+.. .++|.|+++||++|....+. .++++|..+
T Consensus 1 M~i~vigDiHG~------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~----~~l~~l~~l--------- 55 (280)
T 2dfj_A 1 MATYLIGDVHGC------------YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL----DVLRYVKSL--------- 55 (280)
T ss_dssp -CEEEECCCCSC------------HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH----HHHHHHHHT---------
T ss_pred CeEEEEecCCCC------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH----HHHHHHHhC---------
Confidence 789999999954 3467888877665 57899999999999774443 355555542
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004713 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (734)
Q Consensus 92 e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p 131 (734)
..+|++|.||||..
T Consensus 56 --------------------------~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 56 --------------------------GDSVRLVLGNHDLH 69 (280)
T ss_dssp --------------------------GGGEEECCCHHHHH
T ss_pred --------------------------CCceEEEECCCcHH
Confidence 13799999999964
No 43
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.70 E-value=0.00012 Score=82.68 Aligned_cols=54 Identities=19% Similarity=0.239 Sum_probs=35.4
Q ss_pred ceEEEEEcCCCCCCCCCch--------hchhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 004713 12 TVRILVATDCHLGYMEKDE--------IRRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (734)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~--------~R~~Ds~~aFeeIl~~A~e~~VD-~VLiaGDLFd~~ 65 (734)
.++|||++|+|--+...+. ....-.+..+-.+++.+++++++ ++|.+||+|..+
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs 65 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGT 65 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccch
Confidence 3799999999954432211 01111356677777888887777 455699999865
No 44
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.47 E-value=0.00055 Score=71.07 Aligned_cols=185 Identities=15% Similarity=0.108 Sum_probs=97.3
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCC-CCCCCCCChhHHHHHHHHHHHhccCCCCcce
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGD-LFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGD-LFd~~kPs~~tl~~~~~lLr~l~~gd~p~~~ 91 (734)
||||++.|+= |.. -+.++...+...+++. |+||+.|+ .++.. +-.. ...+.|..
T Consensus 1 m~ilf~GDv~-g~~---------G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~-g~~~---~~~~~l~~---------- 55 (255)
T 1t70_A 1 MRVLFIGDVF-GQP---------GRRVLQNHLPTIRPQF-DFVIVNMENSAGGF-GMHR---DAARGALE---------- 55 (255)
T ss_dssp CEEEEECCBB-HHH---------HHHHHHHHHHHHGGGC-SEEEEECTBTTTTS-SCCH---HHHHHHHH----------
T ss_pred CEEEEEeccC-ChH---------HHHHHHHHHHHHHhhC-CEEEECCCCccCCc-CCCH---HHHHHHHh----------
Confidence 8999999985 321 1446677788777777 98887666 44543 3222 23334433
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCC--c---eeeccceeecCCCcccee
Q 004713 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACN--L---VNYFGKMVLGGSGVGEIT 166 (734)
Q Consensus 92 e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~g--l---Vn~FGk~~l~~~~~~~i~ 166 (734)
.++-++++ |||+.-.+ + -++.|.... + .||--.. .. .
T Consensus 56 -------------------------~G~Da~Tl-GNHefD~~-~---l~~~l~~~~~~~~~~aN~~~~~---~p--g--- 97 (255)
T 1t70_A 56 -------------------------AGAGCLTL-GNHAWHHK-D---IYPMLSEDTYPIVRPLNYADPG---TP--G--- 97 (255)
T ss_dssp -------------------------HTCSEEEC-CTTTTSST-T---HHHHHHTTCSCEECCSCCCCTT---CS--S---
T ss_pred -------------------------CCCCEEEe-ccccccCc-h---HHHHHhhCCCcEEEEeccCCCC---CC--C---
Confidence 35566655 99998754 2 123444333 1 1221000 00 0
Q ss_pred EEE-EEEeeCCeeEEEEecCCCChHHHHhhhcChh-hHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccccCCc
Q 004713 167 VYP-ILIRKGSTAVALYGLGNIRDERLNRMFQTPH-AVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR 244 (734)
Q Consensus 167 v~P-ill~kG~t~vaLyGL~~i~derL~~~f~~~~-~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~ 244 (734)
.| .++..++.+|+|.|+--.. -+ ..|.++. .++.+.++ . .-.+-|++.|.... .....-...++.
T Consensus 98 -~g~~I~~~~G~kIgVigl~g~~--~~-~~~~~p~~~~~~~v~~----l--~~d~IIv~~H~e~t---~Ek~~la~~~dg 164 (255)
T 1t70_A 98 -VGWRTFDVNGEKLTVVNLLGRV--FM-EAVDNPFRTMDALLER----D--DLGTVFVDFHAEAT---SEKEAMGWHLAG 164 (255)
T ss_dssp -CSEEEEECSSSEEEEEEEECCT--TS-CCCSCHHHHHHHHTTC----S--SCCEEEEEEECSCH---HHHHHHHHHHTT
T ss_pred -CCeEEEEECCEEEEEEEeecCc--Cc-ccccCHHHHHHHHHHH----h--CCCEEEEEeCCCCh---HHHHHHHHhCCC
Confidence 12 3456778899998863110 00 0122221 11212111 1 23578999996321 000001124556
Q ss_pred CCCEEEeCcccccccCCeecCCCCceEec
Q 004713 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQ 273 (734)
Q Consensus 245 ~~DyVa~GH~H~~~i~Pq~~~~~~~~I~y 273 (734)
.+|+|+-||.|.....++.+++...++.+
T Consensus 165 ~vd~VvGgHTHv~~~d~~il~~gt~~i~d 193 (255)
T 1t70_A 165 RVAAVIGTHTHVPTADTRILKGGTAYQTD 193 (255)
T ss_dssp SSSEEEEESSCSCBSCCEEETTTEEEESC
T ss_pred CeEEEEeCCCCcCCCceEEcCCCeEEEEc
Confidence 79999999999988776655443233443
No 45
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=97.43 E-value=0.00099 Score=74.72 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=35.4
Q ss_pred CCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHH--------HHHhcCCCEEEEcCCCCCCC
Q 004713 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICS--------IAEQKEVDFVLLGGDLFHEN 65 (734)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~--------~A~e~~VD~VLiaGDLFd~~ 65 (734)
...-+|+++||+|+|..... ....++.|-+.|. .....++..||+|||+++..
T Consensus 198 ~~~~~ialVSGL~igs~~~~---~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~ 258 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGE---SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHS 258 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHH---HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-
T ss_pred CCCCEEEEECCcccCCCccc---chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccc
Confidence 45579999999999975311 1233444433332 33456899999999999885
No 46
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=97.34 E-value=0.00018 Score=77.16 Aligned_cols=77 Identities=16% Similarity=0.252 Sum_probs=51.9
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh--------cCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHh
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ--------KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRH 82 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e--------~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l 82 (734)
..+||++++|+|-. +..|.++++.+.. .++|.+|+.||++|...-+.. ++.+|..+
T Consensus 69 ~~~~i~vigDiHG~------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e----vl~~l~~l 132 (342)
T 2z72_A 69 GIKKVVALSDVHGQ------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE----VLWFMYQL 132 (342)
T ss_dssp CCCEEEEECCCTTC------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH----HHHHHHHH
T ss_pred CCCCEEEEECCCCC------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH----HHHHHHHH
Confidence 46899999999944 3467777776542 158999999999998755544 44455443
Q ss_pred ccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004713 83 CLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (734)
Q Consensus 83 ~~gd~p~~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p 131 (734)
.. ++ ...+.+|++|.||||..
T Consensus 133 ~~------------~~----------------~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 133 DQ------------QA----------------RDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HH------------HH----------------HHTTCEEEECCCHHHHH
T ss_pred HH------------HH----------------hhCCCeEEEEecCCcHH
Confidence 10 00 01245799999999963
No 47
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.20 E-value=0.0038 Score=64.69 Aligned_cols=182 Identities=18% Similarity=0.234 Sum_probs=98.6
Q ss_pred eEEEEEcCC--CCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEE-cCCCCCCCCCChhHHHHHHHHHHHhccCCCCc
Q 004713 13 VRILVATDC--HLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLL-GGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (734)
Q Consensus 13 mRILh~SD~--HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLi-aGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~ 89 (734)
||||++.|+ |-| +..+...+...+++. |+||+ +||.|+..-.+. ...+.|.+
T Consensus 1 m~ilfiGDi~g~~G------------~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~~----~~~~~l~~-------- 55 (252)
T 2z06_A 1 MRVLFIGDVMAEPG------------LRAVGLHLPDIRDRY-DLVIANGENAARGKGLDR----RSYRLLRE-------- 55 (252)
T ss_dssp CEEEEECCBCHHHH------------HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCCH----HHHHHHHH--------
T ss_pred CEEEEEEecCCccc------------HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcCH----HHHHHHHh--------
Confidence 799999998 444 456778888888777 98776 556666653332 23333433
Q ss_pred ceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHHhhhCCce---eeccceeecCCCcccee
Q 004713 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLV---NYFGKMVLGGSGVGEIT 166 (734)
Q Consensus 90 ~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glV---n~FGk~~l~~~~~~~i~ 166 (734)
.++-++ ..|||..-.+ + -++.|....++ ||-.. .. .
T Consensus 56 ---------------------------~G~D~~-T~GNHefD~~-~---l~~~l~~~~~vrpaN~~~~----~p--g--- 94 (252)
T 2z06_A 56 ---------------------------AGVDLV-SLGNHAWDHK-E---VYALLESEPVVRPLNYPPG----TP--G--- 94 (252)
T ss_dssp ---------------------------HTCCEE-ECCTTTTSCT-T---HHHHHHHSSEECCTTSCSS----CS--S---
T ss_pred ---------------------------CCCCEE-EeccEeeECc-h---HHHHhccCCceEeecCCCC----CC--C---
Confidence 356665 4599998765 2 22344322211 21100 00 0
Q ss_pred EEE-EEEeeCCeeEEEEecCCCChHHHHhhhcChh-hHhhccchhhhhccCCCceEEEEEccCCCCCCCcCccccccCCc
Q 004713 167 VYP-ILIRKGSTAVALYGLGNIRDERLNRMFQTPH-AVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR 244 (734)
Q Consensus 167 v~P-ill~kG~t~vaLyGL~~i~derL~~~f~~~~-~v~~l~p~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~ 244 (734)
.| .++.+++.+|+|.|+-... -+ ..|.++. .++.+.. .+. -.+-|+++|..... ....-..+++.
T Consensus 95 -~~~~i~~~~G~kIgVi~l~g~~--~~-~~~~~pf~~~~~~v~----~lk--~d~IIv~~H~g~ts---ek~~la~~~dg 161 (252)
T 2z06_A 95 -KGFWRLEVGGESLLFVQVMGRI--FM-DPLDDPFRALDRLLE----EEK--ADYVLVEVHAEATS---EKMALAHYLDG 161 (252)
T ss_dssp -CSEEEEEETTEEEEEEEEECCT--TS-CCCCCHHHHHHHHHH----HCC--CSEEEEEEECSCHH---HHHHHHHHHBT
T ss_pred -CCeEEEEECCEEEEEEEccccc--Cc-cccCCHHHHHHHHHH----HhC--CCEEEEEeCCCcHH---HHHHHHHhCCC
Confidence 12 3456788899988762110 00 0122221 1111111 111 45788999974311 00011123556
Q ss_pred CCCEEEeCcccccccCCeecCCCCceEec
Q 004713 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQ 273 (734)
Q Consensus 245 ~~DyVa~GH~H~~~i~Pq~~~~~~~~I~y 273 (734)
.+|+|+-||.|....+|+.+++...++.+
T Consensus 162 ~Vd~VvGgHTHv~t~d~~il~~gt~~itd 190 (252)
T 2z06_A 162 RASAVLGTHTHVPTLDATRLPKGTLYQTD 190 (252)
T ss_dssp TBSEEEEESSCSCBSCCEECTTSCEEESC
T ss_pred CeEEEEcCCCCcCCCccEEcCCCcEeecC
Confidence 79999999999988877766543344554
No 48
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=97.03 E-value=0.00089 Score=71.23 Aligned_cols=73 Identities=21% Similarity=0.237 Sum_probs=52.9
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCccee
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~~e 92 (734)
++|.+++|+|-- +..|.++++.+.....+.+|+.||++|...-+.. ++.+|..+.
T Consensus 50 ~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e----vl~lL~~lk--------- 104 (309)
T 2ie4_C 50 CPVTVCGDVHGQ------------FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE----TVTLLVALK--------- 104 (309)
T ss_dssp SSEEEECCCTTC------------HHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH----HHHHHHHHH---------
T ss_pred CCEEEEecCCCC------------HHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH----HHHHHHHHH---------
Confidence 689999999943 4467888887766677889999999998865544 455555432
Q ss_pred eechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 004713 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (734)
Q Consensus 93 ~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p~ 132 (734)
+ ...-.|+++.||||...
T Consensus 105 ---------------~-------~~p~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 105 ---------------V-------RYRERITILRGNHESRQ 122 (309)
T ss_dssp ---------------H-------HCTTTEEECCCTTSSTT
T ss_pred ---------------h-------hCCCcEEEEeCCCCHHH
Confidence 0 11335999999999864
No 49
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.96 E-value=0.0012 Score=73.09 Aligned_cols=74 Identities=20% Similarity=0.199 Sum_probs=51.9
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcC-CCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCc
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKE-VDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~-VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~ 89 (734)
..|||++++|+|-- +..|.++++.+.... .|.+|+.||++|...-+.. ++.+|..+.
T Consensus 211 ~~~~~~vigDiHG~------------~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e----~~~~l~~l~------ 268 (477)
T 1wao_1 211 ETEKITVCGDTHGQ------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE----VILTLFGFK------ 268 (477)
T ss_dssp SSCEEEEECBCTTC------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHH----HHHHHHHHH------
T ss_pred CCcceEEEeCCCCC------------HHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHH----HHHHHHHHH------
Confidence 46899999999944 456777777765443 4669999999998865655 444444331
Q ss_pred ceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004713 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (734)
Q Consensus 90 ~~e~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p 131 (734)
+ ..+-+|++|.||||..
T Consensus 269 ------------------~-------~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 269 ------------------L-------LYPDHFHLLRGNHETD 285 (477)
T ss_dssp ------------------H-------HSTTTEEEECCTTSSH
T ss_pred ------------------h-------hCCCceEeecCCccHH
Confidence 0 1245799999999964
No 50
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=96.85 E-value=0.0015 Score=70.18 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=52.8
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCccee
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~~e 92 (734)
++|.+++|+|-- +..|.++++.+.....|-+|+.||+.|...-+.. ++.+|..+.
T Consensus 57 ~~i~viGDIHG~------------~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e----vl~lL~~lk--------- 111 (330)
T 1fjm_A 57 APLKICGDIHGQ------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE----TICLLLAYK--------- 111 (330)
T ss_dssp SSEEEECBCTTC------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH----HHHHHHHHH---------
T ss_pred CceEEecCCCCC------------HHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH----HHHHHHHhh---------
Confidence 579999999954 4568888887766677889999999998865554 455554431
Q ss_pred eechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004713 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (734)
Q Consensus 93 ~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p 131 (734)
+ ...-.|++|.||||..
T Consensus 112 ---------------~-------~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 112 ---------------I-------KYPENFFLLRGNHECA 128 (330)
T ss_dssp ---------------H-------HSTTTEEECCCTTSSH
T ss_pred ---------------h-------hcCCceEEecCCchHh
Confidence 0 1134699999999975
No 51
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=96.72 E-value=0.0031 Score=67.35 Aligned_cols=50 Identities=20% Similarity=0.223 Sum_probs=37.1
Q ss_pred CCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCCChhH
Q 004713 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENKPSRST 71 (734)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~V-D~VLiaGDLFd~~kPs~~t 71 (734)
+..+||.+++|+|-- +..|.++++.+..... +.+|+.||++|...-+..+
T Consensus 57 p~~~ri~viGDIHG~------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~ev 107 (315)
T 3h63_A 57 KETEKITVCGDTHGQ------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEV 107 (315)
T ss_dssp CTTCEEEEECCCTTC------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHH
T ss_pred CCCceEEEEecCCCC------------HHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHH
Confidence 346899999999965 4567778776654433 4599999999998666554
No 52
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=96.64 E-value=0.0027 Score=67.37 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=38.4
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhH
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRST 71 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~t 71 (734)
++|.+++|+|-- +..|.++++.+.....+.+|+.||++|...-+..+
T Consensus 56 ~~i~viGDIHG~------------~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~ev 102 (299)
T 3e7a_A 56 APLKICGDIHGQ------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLET 102 (299)
T ss_dssp SSEEEECBCTTC------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHH
T ss_pred CCEEEEecCCCC------------HHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHH
Confidence 479999999976 45788888887767788899999999998666553
No 53
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.004 Score=67.03 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=37.9
Q ss_pred CceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCCChhHH
Q 004713 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENKPSRSTL 72 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~V-D~VLiaGDLFd~~kPs~~tl 72 (734)
..+||.+++|+|-- +..|.++++.+..... +.+|+.||++|...-+..++
T Consensus 62 ~~~ri~viGDIHG~------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl 112 (335)
T 3icf_A 62 PDVKISVCGDTHGQ------------FYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVA 112 (335)
T ss_dssp TTCEEEEECCCTTC------------HHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHH
T ss_pred cCceEEEEecCCCC------------HHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHH
Confidence 67899999999987 4567778777654433 46999999999986665543
No 54
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=96.40 E-value=0.0042 Score=70.24 Aligned_cols=72 Identities=18% Similarity=0.169 Sum_probs=52.1
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCccee
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr~l~~gd~p~~~e 92 (734)
++|.+++|+|-- +..|.++++.+.....|.+|+.||++|...-+.. ++.+|..+.
T Consensus 83 ~pI~VIGDIHGq------------~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~E----vl~lL~aLk--------- 137 (521)
T 1aui_A 83 APVTVCGDIHGQ------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE----CVLYLWALK--------- 137 (521)
T ss_dssp SSEEEECCCTTC------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHH----HHHHHHHHH---------
T ss_pred cceeeccCCCCC------------HHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHH----HHHHHHHHh---------
Confidence 679999999954 4567788876555567999999999999866655 444454432
Q ss_pred eechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004713 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (734)
Q Consensus 93 ~lSd~~~~F~~~f~~lNy~dpn~n~~IPVf~I~GNHD~p 131 (734)
+ ...-.|++|.||||..
T Consensus 138 ---------------~-------~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 138 ---------------I-------LYPKTLFLLRGNHECR 154 (521)
T ss_dssp ---------------H-------HSTTTEEECCCTTSSH
T ss_pred ---------------h-------hCCCeEEEecCCccHH
Confidence 0 1123599999999975
No 55
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=96.39 E-value=0.0046 Score=67.07 Aligned_cols=47 Identities=17% Similarity=0.129 Sum_probs=38.2
Q ss_pred eEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhH
Q 004713 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRST 71 (734)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~t 71 (734)
++|.+++|+|-- +..|.++++.+.....|.+|+.||++|...-+.++
T Consensus 70 ~pi~ViGDIHG~------------~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~Ev 116 (357)
T 3ll8_A 70 APVTVCGDIHGQ------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIEC 116 (357)
T ss_dssp SSEEEECCCTTC------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHHH
T ss_pred ccceeeccCCCC------------HHHHHHHHHhcCCCCCcEEEECCCccCCCcChHHH
Confidence 579999999986 44677888877677789999999999998666553
No 56
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=94.98 E-value=0.03 Score=63.43 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=30.8
Q ss_pred CCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC
Q 004713 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK 66 (734)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~k 66 (734)
...+||+++||.|..... +.++..|. +.++||||+.||++-...
T Consensus 114 ~~~~rfa~~sc~~~~~g~---------~~~~~~ia----~~~~D~vlhlGD~iY~d~ 157 (527)
T 2yeq_A 114 VPQMTFAFASCQQYEHGY---------YTAYKHMA----KEKLDLVFHLGDYIYEYG 157 (527)
T ss_dssp CCCEEEEEECCCCGGGCC---------CHHHHHHT----TSCCSEEEECSCSSCCCC
T ss_pred CCCeEEEEEecCCCCCCc---------cHHHHHHH----hcCCCEEEecCCcccCCC
Confidence 367999999999863111 23444443 479999999999985543
No 57
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=93.01 E-value=0.17 Score=56.53 Aligned_cols=51 Identities=12% Similarity=0.258 Sum_probs=41.4
Q ss_pred CCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCCC
Q 004713 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENKP 67 (734)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~-~VD~VLiaGDLFd~~kP 67 (734)
...++|+++|.-+-....- .|+-|.++++.+.++ +||++|+.|.+.|...|
T Consensus 145 ~~~l~ivvAsGPyT~sdnl-------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp 196 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNF-------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHP 196 (460)
T ss_dssp SSCEEEEEEESCCSCSSCC-------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCH
T ss_pred CCCcEEEEEeCCccCCCcc-------ChHHHHHHHHHHHhccCCCEEEEecCcccccCc
Confidence 3679999999988775322 256799999998875 89999999999988765
No 58
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=89.99 E-value=0.058 Score=49.70 Aligned_cols=14 Identities=100% Similarity=1.880 Sum_probs=0.0
Q ss_pred CCCCCCCCCcCCCC
Q 004713 585 RGRGRGRGRGRGRG 598 (734)
Q Consensus 585 ~~~~~~~~~~~~~~ 598 (734)
||||||||||||||
T Consensus 102 ~grgrgrg~gr~~~ 115 (119)
T 1b34_A 102 RGRGRGRGRGRGRG 115 (119)
T ss_dssp --------------
T ss_pred CcCCCCCCCCCCCC
Confidence 33344444444443
No 59
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=85.33 E-value=0.16 Score=46.65 Aligned_cols=16 Identities=88% Similarity=1.610 Sum_probs=0.0
Q ss_pred cCCCCCCCCCcCCCCC
Q 004713 584 TRGRGRGRGRGRGRGA 599 (734)
Q Consensus 584 ~~~~~~~~~~~~~~~~ 599 (734)
+||+|||||||||||+
T Consensus 97 ~~~~g~grgrgrg~gr 112 (119)
T 1b34_A 97 GRGRGRGRGRGRGRGR 112 (119)
T ss_dssp ----------------
T ss_pred CCCCCCcCCCCCCCCC
Confidence 4555555555566553
No 60
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=46.70 E-value=34 Score=30.33 Aligned_cols=19 Identities=53% Similarity=0.788 Sum_probs=13.3
Q ss_pred HHHHHHHHHhcCCCEEEEc
Q 004713 40 FEEICSIAEQKEVDFVLLG 58 (734)
Q Consensus 40 FeeIl~~A~e~~VD~VLia 58 (734)
.++|++.|.++++|+|+++
T Consensus 98 ~~~I~~~a~~~~~dliV~G 116 (150)
T 3tnj_A 98 REEIIRIAEQENVDLIVVG 116 (150)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 3567777777777777776
No 61
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=41.10 E-value=9.3 Score=37.25 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=23.1
Q ss_pred cCCCEEEeCcccccccCCeecCCCCceEecCCCCc
Q 004713 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSV 278 (734)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~~~~I~yPGS~v 278 (734)
.+.|+|+.||+|.... .... +..++.|||..
T Consensus 177 ~~~~~vv~GHth~~~~--~~~~--~~~~in~Gs~~ 207 (221)
T 1g5b_A 177 KGADTFIFGHTPAVKP--LKFA--NQMYIDTGAVF 207 (221)
T ss_dssp BTSSEEEECSSCCSSC--EEET--TEEECCCCHHH
T ss_pred cCCCEEEECCCCCccc--eeeC--CEEEEECCCCc
Confidence 4579999999998753 3333 46889999863
No 62
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=40.83 E-value=46 Score=33.87 Aligned_cols=14 Identities=21% Similarity=0.489 Sum_probs=12.0
Q ss_pred HHHhcCCCEEEEcC
Q 004713 46 IAEQKEVDFVLLGG 59 (734)
Q Consensus 46 ~A~e~~VD~VLiaG 59 (734)
.+.+...|+|+++|
T Consensus 31 ~~~~~GtDaI~vGg 44 (235)
T 3w01_A 31 AICMSQTDAIMIGG 44 (235)
T ss_dssp HHHTSSCSEEEECC
T ss_pred HHHHcCCCEEEECC
Confidence 34688999999999
No 63
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=39.97 E-value=61 Score=29.07 Aligned_cols=12 Identities=17% Similarity=0.390 Sum_probs=10.0
Q ss_pred CCCcEEEEcCCC
Q 004713 117 VGLPVFSIHGNH 128 (734)
Q Consensus 117 ~~IPVf~I~GNH 128 (734)
..+||++|+..|
T Consensus 150 ~~~pVlvv~~~~ 161 (162)
T 1mjh_A 150 SNKPVLVVKRKN 161 (162)
T ss_dssp CCSCEEEECCCC
T ss_pred CCCCEEEEeCCC
Confidence 579999998765
No 64
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=36.58 E-value=51 Score=28.76 Aligned_cols=21 Identities=24% Similarity=0.339 Sum_probs=17.2
Q ss_pred HHHHHHHHHhcCCCEEEEcCC
Q 004713 40 FEEICSIAEQKEVDFVLLGGD 60 (734)
Q Consensus 40 FeeIl~~A~e~~VD~VLiaGD 60 (734)
-++|++.|.+.++|+|+++--
T Consensus 91 ~~~I~~~a~~~~~dliV~G~~ 111 (141)
T 1jmv_A 91 GQVLSDAIEQYDVDLLVTGHH 111 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCC
Confidence 477888888999999888754
No 65
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=34.46 E-value=43 Score=33.88 Aligned_cols=15 Identities=33% Similarity=0.570 Sum_probs=12.4
Q ss_pred HHHHhcCCCEEEEcC
Q 004713 45 SIAEQKEVDFVLLGG 59 (734)
Q Consensus 45 ~~A~e~~VD~VLiaG 59 (734)
+.+.+...|+|+++|
T Consensus 25 ~~~~~~GtD~i~vGG 39 (228)
T 3vzx_A 25 EILCESGTDAVIIGG 39 (228)
T ss_dssp HHHHTSSCSEEEECC
T ss_pred HHHHHcCCCEEEECC
Confidence 334688999999999
No 66
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=32.85 E-value=61 Score=28.25 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhcCCCEEEEcC
Q 004713 39 AFEEICSIAEQKEVDFVLLGG 59 (734)
Q Consensus 39 aFeeIl~~A~e~~VD~VLiaG 59 (734)
..++|++.|.++++|+|+++-
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~ 114 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIAS 114 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEES
T ss_pred hHHHHHHHHHHhCCCEEEEeC
Confidence 457788888888888888875
No 67
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=31.71 E-value=92 Score=28.19 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=11.8
Q ss_pred CCCCcEEEEcCCCCCC
Q 004713 116 NVGLPVFSIHGNHDDP 131 (734)
Q Consensus 116 n~~IPVf~I~GNHD~p 131 (734)
+..+||++|+...+..
T Consensus 146 ~~~~PVlvv~~~~~~~ 161 (170)
T 2dum_A 146 KTKKPVLIIKEVDENE 161 (170)
T ss_dssp HCSSCEEEECCCCCC-
T ss_pred hCCCCEEEEccCCccc
Confidence 3579999999776554
No 68
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=30.36 E-value=74 Score=30.59 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=21.2
Q ss_pred hcHHHHHHHHHHHHHhc-CCCEEEEcCCC
Q 004713 34 HDSFEAFEEICSIAEQK-EVDFVLLGGDL 61 (734)
Q Consensus 34 ~Ds~~aFeeIl~~A~e~-~VD~VLiaGDL 61 (734)
.|..+.+.+.+..+.+. ++|+||.+|=+
T Consensus 63 ~Dd~~~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 63 PDDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CSCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 45567777777777665 59999999965
No 69
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=25.58 E-value=1.8e+02 Score=24.58 Aligned_cols=54 Identities=13% Similarity=-0.035 Sum_probs=29.8
Q ss_pred CCceEEEEEcCCCCCCCC-----CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 004713 10 ANTVRILVATDCHLGYME-----KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (734)
Q Consensus 10 ~~~mRILh~SD~HLG~~e-----~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd 63 (734)
..++|||++.|...-... ......-......+++++.+.+..+|+||+--++-+
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~ 63 (137)
T 3hdg_A 5 EVALKILIVEDDTDAREWLSTIISNHFPEVWSAGDGEEGERLFGLHAPDVIITDIRMPK 63 (137)
T ss_dssp --CCCEEEECSCHHHHHHHHHHHHTTCSCEEEESSHHHHHHHHHHHCCSEEEECSSCSS
T ss_pred ccccEEEEEeCCHHHHHHHHHHHHhcCcEEEEECCHHHHHHHHhccCCCEEEEeCCCCC
Confidence 356899999886432100 000000011223466677777889999999766654
No 70
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=24.99 E-value=84 Score=27.17 Aligned_cols=21 Identities=10% Similarity=0.259 Sum_probs=18.6
Q ss_pred HHHHHHHHHhcCCCEEEEcCC
Q 004713 40 FEEICSIAEQKEVDFVLLGGD 60 (734)
Q Consensus 40 FeeIl~~A~e~~VD~VLiaGD 60 (734)
+++++..++..++-+|++|.|
T Consensus 20 ~~~v~kai~~gka~lViiA~D 40 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAKN 40 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEECC
T ss_pred HHHHHHHHHcCCccEEEEeCC
Confidence 567888888899999999999
No 71
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=24.48 E-value=65 Score=28.55 Aligned_cols=22 Identities=18% Similarity=0.360 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcCCCEEEEcCCC
Q 004713 40 FEEICSIAEQKEVDFVLLGGDL 61 (734)
Q Consensus 40 FeeIl~~A~e~~VD~VLiaGDL 61 (734)
+++++..++..++-+||+|.|.
T Consensus 26 ~~~v~kai~~gka~lViiA~D~ 47 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLAGNI 47 (110)
T ss_dssp HHHHHHHHHTTCCSEEEECTTC
T ss_pred HHHHHHHHHcCCceEEEEeCCC
Confidence 5677787888899999999997
No 72
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=24.46 E-value=2.6e+02 Score=27.66 Aligned_cols=71 Identities=17% Similarity=0.311 Sum_probs=44.4
Q ss_pred ceEEE-EEcCCCCCCC--CCchhchhcHHHHHHHHHHHHHhcCCCEEEEcC-CCCCCCCCChhHHHHHHHHHHHhc
Q 004713 12 TVRIL-VATDCHLGYM--EKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGG-DLFHENKPSRSTLVKAIEILRRHC 83 (734)
Q Consensus 12 ~mRIL-h~SD~HLG~~--e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaG-DLFd~~kPs~~tl~~~~~lLr~l~ 83 (734)
.+++. +.+..|.++. ..++..+....+.|+++++.|.+.++..|++.| +.+. .........++++.|+++|
T Consensus 79 gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~-~~~~~~~~~~~~~~l~~l~ 153 (295)
T 3cqj_A 79 GVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYY-QEANNETRRRFRDGLKESV 153 (295)
T ss_dssp CCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSS-SCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCc-CcCHHHHHHHHHHHHHHHH
Confidence 35554 2234453332 234445566788999999999999999998864 3321 2234556666777777664
No 73
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=24.15 E-value=1.1e+02 Score=26.60 Aligned_cols=9 Identities=22% Similarity=0.154 Sum_probs=7.1
Q ss_pred CCCcEEEEc
Q 004713 117 VGLPVFSIH 125 (734)
Q Consensus 117 ~~IPVf~I~ 125 (734)
..+||++|+
T Consensus 138 ~~~pVlvV~ 146 (146)
T 3s3t_A 138 APCNVIVIR 146 (146)
T ss_dssp CSSEEEEEC
T ss_pred CCCCEEEeC
Confidence 578999875
No 74
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=22.36 E-value=1.8e+02 Score=27.40 Aligned_cols=24 Identities=25% Similarity=0.313 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCC
Q 004713 38 EAFEEICSIAEQKEVDFVLLGGDL 61 (734)
Q Consensus 38 ~aFeeIl~~A~e~~VD~VLiaGDL 61 (734)
+.+.+.+..+.+.++|+||.+|=+
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG~ 76 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGGT 76 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 777777777776689999999965
No 75
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=22.16 E-value=1.5e+02 Score=27.02 Aligned_cols=23 Identities=26% Similarity=0.273 Sum_probs=18.7
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCC
Q 004713 41 EEICSIAEQKEVDFVLLGGDLFH 63 (734)
Q Consensus 41 eeIl~~A~e~~VD~VLiaGDLFd 63 (734)
.+++......++-+||+|.|.-.
T Consensus 30 ~~v~Kai~~gka~LViiA~D~~p 52 (126)
T 2xzm_U 30 HEVLRTIEAKQALFVCVAEDCDQ 52 (126)
T ss_dssp HHHHHHHHHTCCSEEEEESSCCS
T ss_pred HHHHHHHHcCCceEEEEeCCCCh
Confidence 56677778889999999999643
No 76
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=21.98 E-value=4.6e+02 Score=27.05 Aligned_cols=62 Identities=31% Similarity=0.331 Sum_probs=36.2
Q ss_pred CCCCCCceEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHH
Q 004713 6 REDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILR 80 (734)
Q Consensus 6 ~~~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd~~kPs~~tl~~~~~lLr 80 (734)
+.+.++.--.++.|-..++- ++.-.+-..++++|.+-++|||++.+ ++|...-=..+-++|.
T Consensus 27 rAdRedI~vrv~gsGaKm~p--------e~~~~~~~~~~~~~~~~~pDfvI~is-----PN~a~PGP~~ARE~l~ 88 (283)
T 1qv9_A 27 RADREDVEFRVVGTSVKMDP--------ECVEAAVEMALDIAEDFEPDFIVYGG-----PNPAAPGPSKAREMLA 88 (283)
T ss_dssp TSCCSSEEEEEEECTTCCSH--------HHHHHHHHHHHHHHHHHCCSEEEEEC-----SCTTSHHHHHHHHHHH
T ss_pred hhccCCceEEEeccCCCCCH--------HHHHHHHHHhhhhhhhcCCCEEEEEC-----CCCCCCCchHHHHHHH
Confidence 33444544555555444441 23334556677888999999999876 3444333345666654
No 77
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=21.86 E-value=2.5e+02 Score=24.34 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=33.3
Q ss_pred CCCCCCceEEEEEcCCCCCCCC------CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 004713 6 REDIANTVRILVATDCHLGYME------KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (734)
Q Consensus 6 ~~~~~~~mRILh~SD~HLG~~e------~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd 63 (734)
......+++||++.|...-... .... .-......+++++.+.+..+|+||+-=++-+
T Consensus 8 ~~~~~~~~~ILivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~ 70 (153)
T 3hv2_A 8 VATVTRRPEILLVDSQEVILQRLQQLLSPLPY-TLHFARDATQALQLLASREVDLVISAAHLPQ 70 (153)
T ss_dssp CCCCCSCCEEEEECSCHHHHHHHHHHHTTSSC-EEEEESSHHHHHHHHHHSCCSEEEEESCCSS
T ss_pred hhhccCCceEEEECCCHHHHHHHHHHhcccCc-EEEEECCHHHHHHHHHcCCCCEEEEeCCCCc
Confidence 3345567899999886532100 0000 0011234567777778899999999766654
No 78
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=21.14 E-value=2.7e+02 Score=24.09 Aligned_cols=53 Identities=17% Similarity=0.127 Sum_probs=30.7
Q ss_pred CceEEEEEcCCCCCCC------CC-chhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 004713 11 NTVRILVATDCHLGYM------EK-DEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (734)
Q Consensus 11 ~~mRILh~SD~HLG~~------e~-d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd 63 (734)
.++|||++.|...-.. .. ....-........++++.+.+..+|+||+--++-+
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~ 63 (153)
T 3cz5_A 4 STARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPG 63 (153)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSS
T ss_pred cccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCC
Confidence 4689999888643210 00 00000001234567777778889999999766654
No 79
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=20.68 E-value=1.9e+02 Score=31.27 Aligned_cols=47 Identities=11% Similarity=0.079 Sum_probs=30.6
Q ss_pred hcHHHHHHHHHHHHHhcCCCEEEEc-------CCCCCCCCCChhHHHHHHHHHH
Q 004713 34 HDSFEAFEEICSIAEQKEVDFVLLG-------GDLFHENKPSRSTLVKAIEILR 80 (734)
Q Consensus 34 ~Ds~~aFeeIl~~A~e~~VD~VLia-------GDLFd~~kPs~~tl~~~~~lLr 80 (734)
.+...+|++++..+.+.+||+||+. ||=+-.-+-+.....++.+.|+
T Consensus 274 ~~yl~~~~~~l~~l~~f~PdlIvvsaG~Da~~~Dplg~l~lt~~~~~~~~~~l~ 327 (362)
T 3men_A 274 AAFFERVDDALRELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIG 327 (362)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEECSTTBTTCTTCCBCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEECcccCcCCCCCCCccCCHHHHHHHHHHHH
Confidence 3456789999988888999999873 3433233345555555555444
No 80
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=20.43 E-value=1.2e+02 Score=29.77 Aligned_cols=53 Identities=13% Similarity=0.033 Sum_probs=37.4
Q ss_pred chhchhcHHHHHHHHHHHHHhcCCCEEEE-cCCCCCCCCCChhHHHHHHHHHHHhc
Q 004713 29 DEIRRHDSFEAFEEICSIAEQKEVDFVLL-GGDLFHENKPSRSTLVKAIEILRRHC 83 (734)
Q Consensus 29 d~~R~~Ds~~aFeeIl~~A~e~~VD~VLi-aGDLFd~~kPs~~tl~~~~~lLr~l~ 83 (734)
++..+....+.|+++++.|.+.++..|++ +| .....+.......+.+.|++++
T Consensus 84 ~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g--~~~~~~~~~~~~~~~~~l~~l~ 137 (269)
T 3ngf_A 84 ISGREQEFRDNVDIALHYALALDCRTLHAMSG--ITEGLDRKACEETFIENFRYAA 137 (269)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTTCCEEECCBC--BCTTSCHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHcCCCEEEEccC--CCCCCCHHHHHHHHHHHHHHHH
Confidence 34455667888999999999999998876 67 3333334455666777777764
No 81
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=20.06 E-value=2.3e+02 Score=24.53 Aligned_cols=56 Identities=16% Similarity=0.177 Sum_probs=31.6
Q ss_pred CCCCceEEEEEcCCCCCCCC-------CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 004713 8 DIANTVRILVATDCHLGYME-------KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (734)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e-------~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLiaGDLFd 63 (734)
....|||||++.|...-... ......-......+++++.+.+..+|+||+-=++-+
T Consensus 16 ~~~~m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~ 78 (150)
T 4e7p_A 16 PRGSHMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPV 78 (150)
T ss_dssp ----CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSS
T ss_pred CCCCccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCC
Confidence 45678999999886532110 000000111234567777888899999998766654
Done!