BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004720
(733 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8IYF3|TEX11_HUMAN Testis-expressed sequence 11 protein OS=Homo sapiens GN=TEX11 PE=1
SV=3
Length = 940
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 36/271 (13%)
Query: 416 ELVSDERVLALFVGDAAAKERIA-----MHAVLWNCASILFRSKDYEASAEMFEKSMLYL 470
EL++ E++ +F+ ++ A +H +LW A+ F ++Y + + + S+ +
Sbjct: 388 ELLAKEKIEEIFLAHQTGRQLTAESMNWLHNILWRQAASSFEVQNYTDALQWYYYSLRFY 447
Query: 471 PFDVENRILRAKSFRVLCLCYLGLSLIDRAQEYITEAEKLEP-NIASAFLKFKIYLQKND 529
D E + K R + CYL L +D+A+E + EAE+ +P N+ + F FKI + + +
Sbjct: 448 STD-EMDLDFTKLQRNMACCYLNLQQLDKAKEAVAEAERHDPRNVFTQFYIFKIAVIEGN 506
Query: 530 QEGAINQILAMTICL--------DFT------TDFLSLAAHEAVACQALSVAVAALSNLL 575
E A+ I+ + L D T LSLAA A+ VA AL L
Sbjct: 507 SERALQAIITLENILTDEESEDNDLVAERGSPTMLLSLAAQFALENGQQIVAEKALEYLA 566
Query: 576 NFYTSGKPMPTKEVVVLRTIVTILTQETGNESE------VLKYMKRAHARTSEIGANCFF 629
+ + T +LR ++ + + +E + +L + RA + S+ F
Sbjct: 567 QHSEDQEQVLTAVKCLLRFLLPKIAEMPESEDKKKEMDRLLTCLNRAFVKLSQP-----F 621
Query: 630 GTE----EAGRREQNWLAVMSWNFGTNCGKE 656
G E E+ E W +WN C K+
Sbjct: 622 GEEALSLESRANEAQWFRKTAWNLAVQCDKD 652
>sp|Q14AT2|TEX11_MOUSE Testis-expressed sequence 11 protein OS=Mus musculus GN=Tex11 PE=2
SV=1
Length = 947
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 134/314 (42%), Gaps = 30/314 (9%)
Query: 439 MHAVLWNCASILFRSKDYEASAEMFEKSMLYLPFDVENRILRAKSFRVLCLCYLGLSLID 498
+H +LW AS + + Y + + S+ +D + L K R + CYL L +D
Sbjct: 402 LHNILWGKASRSVKVQKYADALHWYSYSLKLYEYDKADLDL-IKLKRNMVSCYLSLKQLD 460
Query: 499 RAQEYITEAEKLEP-NIASAFLKFKIYLQKNDQEGAINQILAMTICL-DFTTDFLSLAAH 556
+A+E I E E+ +P ++ + + FKI + + D A+ + A+ L D ++ L
Sbjct: 461 KAKEAIAEVEQKDPTHVFTRYYIFKIAIMEGDAFRALQVVSALKKSLMDGESEDRGLIEA 520
Query: 557 EAVACQALSVAVA-ALSNLLNF-------YTSGKPMPTKEVV-VLRTIVTILTQETGNES 607
LS+++ AL N F Y KEV+ L+ ++ I+ + +
Sbjct: 521 GVSTLTILSLSIDFALENGQQFVAERALEYLCQLSKDPKEVLGGLKCLMRIILPQAFHMP 580
Query: 608 EVLKYMKRAHAR------TSEIGANCFFG----TEEAGRREQNWLAVMSWNFGTNCGKEK 657
E +Y K+ R T+ + + +F T + + NW ++WN EK
Sbjct: 581 ES-EYKKKEMGRLWNYLNTALLKFSEYFNEAPSTLDYMVNDANWFRKIAWNLAVQ--SEK 637
Query: 658 KYELCMEFLRLASEFYGIRVDGQVEENSITVCKSLILTVSAMIASENQK--QIALMNNEV 715
E F ++ Y + + +++ + K+ +L +A+ +K I N +
Sbjct: 638 DLEAMKNFFMVS---YKLSLFCPLDQGLLIAQKTCLLVAAAVDLDRGRKAPTICEQNMLL 694
Query: 716 KQALELLDRAGKVY 729
+ ALE + + KV+
Sbjct: 695 RTALEQIKKCKKVW 708
>sp|A9WJM3|RNY_CHLAA Ribonuclease Y OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=rny PE=3 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 21/151 (13%)
Query: 492 LGLSLIDRAQEYITEAEKLEPNIASAFLKFKIYLQKNDQEGAINQILAMTICLDFTTDFL 551
+GL++ A +Y+ E N+ S LK +I ++ A QI + I +D T + +
Sbjct: 184 IGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTPEAV 243
Query: 552 SLAAHEAVACQALSVAVAALSNLLNFYTSGKPMPTK-EVVVLRT---IVTILTQE----- 602
+L+ H+ V + VA LL G+ P++ E VV +T I I+ +E
Sbjct: 244 TLSCHDPVRREVARVA------LLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVA 297
Query: 603 -----TGNESEVLKYMKRAHARTSEIGANCF 628
G +++K + R RTS G N
Sbjct: 298 YEANVQGLHPDLIKLLGRLKYRTS-YGQNVL 327
>sp|Q5ZI13|DNJC3_CHICK DnaJ homolog subfamily C member 3 OS=Gallus gallus GN=DNAJC3 PE=2
SV=1
Length = 503
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 443 LWNCASILFRSKDYEASAEMFEKSMLYLPFDVENRILRAKSFRVLCLCYLGLSLIDRAQE 502
L++ A +R +DYEA+ + ++ + +D E R LRA+ CY+ +A
Sbjct: 156 LYSQALSAYRQEDYEAAIPLLDEILAVCVWDAELRELRAE-------CYIKEGEPSKAIS 208
Query: 503 YITEAEKLEPNIASAFLKF-KIYLQKNDQEGAINQILAMTICLDFTTD 549
+ A KL+ + AF K +IY Q D E +++++ CL D
Sbjct: 209 DLKAAAKLKSDNTEAFYKISRIYYQLGDHELSLSEVRE---CLKLDQD 253
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,609,138
Number of Sequences: 539616
Number of extensions: 9114487
Number of successful extensions: 25761
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 25753
Number of HSP's gapped (non-prelim): 13
length of query: 733
length of database: 191,569,459
effective HSP length: 125
effective length of query: 608
effective length of database: 124,117,459
effective search space: 75463415072
effective search space used: 75463415072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)