Query 004721
Match_columns 733
No_of_seqs 512 out of 2895
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 03:41:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydy_A Glycerophosphoryl diest 100.0 1.8E-48 6E-53 423.9 20.3 286 89-392 28-355 (356)
2 2pz0_A Glycerophosphoryl diest 100.0 7.3E-48 2.5E-52 399.4 23.2 241 406-712 10-251 (252)
3 3qvq_A Phosphodiesterase OLEI0 100.0 4.9E-47 1.7E-51 393.0 26.8 245 403-712 5-250 (252)
4 3qvq_A Phosphodiesterase OLEI0 100.0 1.2E-47 4.2E-52 397.5 20.3 242 84-394 2-249 (252)
5 2pz0_A Glycerophosphoryl diest 100.0 1.9E-47 6.6E-52 396.2 19.1 235 90-393 10-249 (252)
6 2oog_A Glycerophosphoryl diest 100.0 6.3E-47 2.2E-51 399.8 21.8 250 404-711 20-280 (287)
7 2otd_A Glycerophosphodiester p 100.0 1.6E-46 5.4E-51 388.4 22.2 234 91-393 6-245 (247)
8 2oog_A Glycerophosphoryl diest 100.0 4.2E-47 1.4E-51 401.2 18.2 253 81-396 12-282 (287)
9 3ks6_A Glycerophosphoryl diest 100.0 1.7E-46 5.7E-51 388.4 22.3 242 407-712 2-244 (250)
10 2otd_A Glycerophosphodiester p 100.0 1.9E-46 6.6E-51 387.7 21.7 240 406-710 5-245 (247)
11 1ydy_A Glycerophosphoryl diest 100.0 4.5E-46 1.5E-50 404.9 25.5 292 405-709 28-355 (356)
12 3l12_A Putative glycerophospho 100.0 1.5E-45 5.1E-50 394.0 27.8 283 395-714 5-310 (313)
13 2o55_A Putative glycerophospho 100.0 3.1E-45 1E-49 381.2 23.2 242 405-713 4-257 (258)
14 3l12_A Putative glycerophospho 100.0 1.6E-45 5.5E-50 393.8 21.5 263 90-395 16-308 (313)
15 3ks6_A Glycerophosphoryl diest 100.0 6.1E-46 2.1E-50 384.2 16.9 234 91-396 2-245 (250)
16 3no3_A Glycerophosphodiester p 100.0 7.5E-45 2.6E-49 373.1 21.5 232 406-713 3-237 (238)
17 3ch0_A Glycerophosphodiester p 100.0 3.6E-45 1.2E-49 383.8 18.8 247 90-390 7-271 (272)
18 3ch0_A Glycerophosphodiester p 100.0 7.8E-45 2.7E-49 381.2 21.1 252 406-706 7-270 (272)
19 3mz2_A Glycerophosphoryl diest 100.0 2.5E-44 8.6E-49 379.1 24.6 252 404-719 28-285 (292)
20 1zcc_A Glycerophosphodiester p 100.0 4.6E-46 1.6E-50 384.8 10.6 235 408-716 2-239 (248)
21 2o55_A Putative glycerophospho 100.0 1.1E-44 3.7E-49 377.0 20.8 239 89-394 4-255 (258)
22 3mz2_A Glycerophosphoryl diest 100.0 2.9E-44 1E-48 378.5 19.9 246 84-398 24-281 (292)
23 1zcc_A Glycerophosphodiester p 100.0 9.9E-46 3.4E-50 382.3 7.8 229 92-397 2-237 (248)
24 3no3_A Glycerophosphodiester p 100.0 2.6E-44 8.8E-49 369.1 14.4 224 90-394 3-235 (238)
25 1o1z_A GDPD, glycerophosphodie 100.0 3.1E-43 1E-47 360.2 17.8 219 406-708 11-233 (234)
26 3i10_A Putative glycerophospho 100.0 1.4E-42 4.8E-47 362.0 22.4 255 404-714 14-276 (278)
27 1vd6_A Glycerophosphoryl diest 100.0 6.3E-43 2.2E-47 355.9 17.8 216 405-708 5-222 (224)
28 1vd6_A Glycerophosphoryl diest 100.0 7.3E-43 2.5E-47 355.4 17.7 216 89-392 5-223 (224)
29 1o1z_A GDPD, glycerophosphodie 100.0 6.3E-43 2.2E-47 357.9 16.4 221 90-391 11-233 (234)
30 3i10_A Putative glycerophospho 100.0 3.4E-40 1.2E-44 344.0 18.6 251 88-395 14-274 (278)
31 1xx1_A Smase I, sphingomyelina 100.0 3.7E-34 1.3E-38 302.1 11.0 233 406-714 4-266 (285)
32 1xx1_A Smase I, sphingomyelina 100.0 1.5E-34 5.2E-39 305.0 6.6 232 90-395 4-264 (285)
33 3rlg_A Sphingomyelin phosphodi 99.9 6.1E-22 2.1E-26 202.5 16.1 231 406-714 27-283 (302)
34 3rlg_A Sphingomyelin phosphodi 99.9 1.7E-22 5.7E-27 206.6 7.3 229 90-395 27-281 (302)
35 1djx_A PLC-D1, phosphoinositid 91.6 0.087 3E-06 60.6 3.5 50 411-460 177-229 (624)
36 2zkm_X 1-phosphatidylinositol- 90.6 0.13 4.3E-06 60.9 3.6 52 409-460 323-379 (799)
37 3qr0_A Phospholipase C-beta (P 89.6 0.16 5.6E-06 59.8 3.4 52 409-460 334-388 (816)
38 1djx_A PLC-D1, phosphoinositid 89.6 0.22 7.4E-06 57.3 4.3 49 95-145 177-228 (624)
39 3kts_A Glycerol uptake operon 88.7 6.6 0.00023 37.6 13.4 141 522-704 38-183 (192)
40 2zkm_X 1-phosphatidylinositol- 88.2 0.31 1.1E-05 57.5 4.5 49 95-145 325-378 (799)
41 3qr0_A Phospholipase C-beta (P 87.3 0.37 1.3E-05 56.8 4.4 50 94-145 335-387 (816)
42 3ohm_B 1-phosphatidylinositol- 85.6 0.33 1.1E-05 57.6 2.7 52 409-460 327-383 (885)
43 1vkf_A Glycerol uptake operon 83.9 11 0.00037 35.9 11.9 139 523-705 41-182 (188)
44 3h4x_A Phosphatidylinositol-sp 83.0 1.3 4.4E-05 45.7 5.4 49 408-460 32-81 (339)
45 3ohm_B 1-phosphatidylinositol- 81.3 0.76 2.6E-05 54.5 3.4 49 95-145 329-382 (885)
46 3qja_A IGPS, indole-3-glycerol 79.4 20 0.00068 36.2 13.0 139 206-384 41-190 (272)
47 3h4x_A Phosphatidylinositol-sp 76.4 4.3 0.00015 41.9 6.7 49 93-147 33-82 (339)
48 3glc_A Aldolase LSRF; TIM barr 74.8 5.6 0.00019 40.9 7.3 90 330-439 161-254 (295)
49 2qjg_A Putative aldolase MJ040 74.5 4.1 0.00014 41.1 6.2 101 330-441 135-236 (273)
50 1i4n_A Indole-3-glycerol phosp 66.4 14 0.00049 36.9 7.9 140 207-387 30-182 (251)
51 3fok_A Uncharacterized protein 63.0 9.5 0.00032 39.1 5.8 92 330-439 166-270 (307)
52 3tsm_A IGPS, indole-3-glycerol 61.5 37 0.0013 34.3 10.0 141 206-386 44-199 (272)
53 1to3_A Putative aldolase YIHT; 60.8 13 0.00044 38.3 6.6 96 330-439 145-251 (304)
54 2p10_A MLL9387 protein; putati 49.4 22 0.00075 36.0 5.8 87 330-439 153-256 (286)
55 1vkf_A Glycerol uptake operon 47.7 36 0.0012 32.3 6.7 56 647-710 45-100 (188)
56 2l82_A Designed protein OR32; 46.6 1.3E+02 0.0046 25.4 10.9 53 648-709 93-145 (162)
57 1pii_A N-(5'phosphoribosyl)ant 44.1 44 0.0015 36.3 7.7 139 207-387 38-188 (452)
58 3q58_A N-acetylmannosamine-6-p 43.7 2.3E+02 0.008 27.4 13.7 143 527-699 7-155 (229)
59 3kts_A Glycerol uptake operon 43.6 48 0.0017 31.5 7.0 57 647-711 43-100 (192)
60 2rbg_A Putative uncharacterize 41.6 14 0.00047 31.8 2.4 44 330-387 47-97 (126)
61 3q58_A N-acetylmannosamine-6-p 39.6 74 0.0025 31.0 7.9 188 208-440 7-208 (229)
62 4e38_A Keto-hydroxyglutarate-a 37.2 3E+02 0.01 26.8 12.7 140 528-715 25-171 (232)
63 3a24_A Alpha-galactosidase; gl 36.5 12 0.00041 42.6 1.7 98 330-444 350-453 (641)
64 1yxy_A Putative N-acetylmannos 36.1 72 0.0025 30.8 7.3 99 330-443 8-109 (234)
65 1w8s_A FBP aldolase, fructose- 34.0 63 0.0021 32.3 6.5 99 330-439 128-228 (263)
66 3a24_A Alpha-galactosidase; gl 33.4 52 0.0018 37.4 6.3 50 647-704 349-398 (641)
67 3igs_A N-acetylmannosamine-6-p 32.9 93 0.0032 30.4 7.4 188 208-440 7-208 (232)
68 3igs_A N-acetylmannosamine-6-p 32.1 3.6E+02 0.012 26.1 13.6 145 526-699 6-155 (232)
69 2d73_A Alpha-glucosidase SUSB; 31.9 50 0.0017 38.0 5.8 51 648-702 421-471 (738)
70 3o27_A Putative uncharacterize 30.4 22 0.00075 27.5 1.7 44 95-140 14-59 (68)
71 2htm_A Thiazole biosynthesis p 28.2 40 0.0014 33.8 3.7 100 330-457 111-222 (268)
72 2r6o_A Putative diguanylate cy 28.0 3E+02 0.01 27.6 10.6 146 527-698 95-259 (294)
73 3f4w_A Putative hexulose 6 pho 27.7 1.9E+02 0.0064 27.1 8.6 42 648-700 93-134 (211)
74 3kbb_A Phosphorylated carbohyd 26.6 3.1E+02 0.011 25.0 10.0 46 647-711 166-214 (216)
75 3e8m_A Acylneuraminate cytidyl 26.2 85 0.0029 28.0 5.5 57 648-717 37-96 (164)
76 4e38_A Keto-hydroxyglutarate-a 25.4 2E+02 0.0069 28.0 8.2 78 329-436 116-196 (232)
77 1wv2_A Thiazole moeity, thiazo 24.2 89 0.003 31.2 5.3 97 331-456 123-230 (265)
78 2rbg_A Putative uncharacterize 23.3 38 0.0013 29.1 2.1 31 656-699 62-92 (126)
79 2bdq_A Copper homeostasis prot 23.0 4.2E+02 0.014 25.6 9.8 108 579-699 22-152 (224)
80 3g8r_A Probable spore coat pol 22.2 4.4E+02 0.015 27.3 10.5 32 90-121 4-36 (350)
81 3mmz_A Putative HAD family hyd 22.1 87 0.003 28.7 4.7 54 650-717 47-103 (176)
82 3ij5_A 3-deoxy-D-manno-octulos 21.8 85 0.0029 30.0 4.7 54 650-716 84-140 (211)
83 3lab_A Putative KDPG (2-keto-3 21.7 2E+02 0.0067 27.9 7.2 118 562-716 27-157 (217)
84 2bas_A YKUI protein; EAL domai 21.7 4.9E+02 0.017 27.6 11.3 133 542-699 108-254 (431)
85 2yxb_A Coenzyme B12-dependent 21.5 2E+02 0.0067 26.2 6.9 39 648-700 87-128 (161)
86 1vc4_A Indole-3-glycerol phosp 21.0 3E+02 0.01 27.0 8.7 138 207-386 36-184 (254)
87 3pjx_A Cyclic dimeric GMP bind 20.9 3.1E+02 0.011 28.9 9.5 145 527-698 264-419 (430)
88 1wa3_A 2-keto-3-deoxy-6-phosph 20.7 5E+02 0.017 23.9 12.0 103 562-701 24-132 (205)
89 3mn1_A Probable YRBI family ph 20.6 95 0.0032 28.8 4.7 56 649-717 53-111 (189)
90 2d73_A Alpha-glucosidase SUSB; 20.2 39 0.0013 38.9 2.1 51 330-385 421-471 (738)
91 3n1u_A Hydrolase, HAD superfam 20.1 1.2E+02 0.004 28.2 5.2 56 650-718 54-112 (191)
No 1
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=1.8e-48 Score=423.86 Aligned_cols=286 Identities=20% Similarity=0.296 Sum_probs=216.6
Q ss_pred CCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCCC
Q 004721 89 GDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (733)
Q Consensus 89 ~~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~ 168 (733)
+.+|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.+.|+++++. +|.
T Consensus 28 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~f~~~~~~---~g~- 101 (356)
T 1ydy_A 28 SNEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD--YLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK---DGR- 101 (356)
T ss_dssp -CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT---TSC-
T ss_pred CCCceEEEeCCCCCCCCcchHHHHHHHHHcCCC--EEEeeeEECCCCcEEEeCCChHHhhcCccccccccccc---CCC-
Confidence 457899999999999999999999999999999 99999999999999999999999999998888776653 332
Q ss_pred CCccccccCCHHhhccccccccccC--------CCCCCCC--CCcccccHHHHHHhhC--------CCceEeeccCchhh
Q 004721 169 TPGWFSIDYTLNDLSNIILNQGVYS--------RTDKFDG--NGFQILTVQDMARQIK--------PPGLWLNIQHDAFY 230 (733)
Q Consensus 169 ~~g~~v~d~T~~eL~~l~~~~~~~~--------~~~~~~g--~~~~iptL~e~l~~~~--------~~~l~iEiK~~~~~ 230 (733)
|+|.|+||+||++|+++.||.. ++..|.. .+++||||+|+|++++ +++++||||.+...
T Consensus 102 ---~~v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~ 178 (356)
T 1ydy_A 102 ---YYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFH 178 (356)
T ss_dssp ---CBGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHH
T ss_pred ---cchhhCcHHHHHhCCCCccccccccccccccccccccccCCCcCCCHHHHHHHHHHhhhcccCCceEEEeecCcccc
Confidence 4899999999999999987642 2233321 1589999999999985 47899999987654
Q ss_pred hhcCCcHHHHHHHHHhhcCC------ceeccCCHHHHHHHHHh-----cCCCcccchhhhcCCCccC---------CCCC
Q 004721 231 AQHNLSMRSFVLSVSRSVVV------NYISSPEVNFLRSIAAR-----FRPSMTKLVFRFLGKSEIE---------PTTN 290 (733)
Q Consensus 231 ~~~~~~~~~~v~~~l~~~~~------~~i~SF~~~~l~~l~~~-----~p~~~~~~~~~l~~~~~~~---------~~~~ 290 (733)
...+..+++.++++++++++ ++|+||+++.|++++++ .| .+++++++ ...... +..+
T Consensus 179 ~~~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~p~~~p--~~~~~~L~-~~~~~~~~~~~~~~~~~~~ 255 (356)
T 1ydy_A 179 HQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGM--ELNLVQLI-AYTDWNETQQKQPDGSWVN 255 (356)
T ss_dssp HHTTCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTC--CCEEEEEE-CCGGGCCCEEECTTSCEEE
T ss_pred cccchhHHHHHHHHHHHcCCCCCCCCEEEEcCCHHHHHHHHhhcccccCC--CceEEEEe-ccCcccccccccccccccc
Confidence 43445689999999999875 59999999999999998 56 67777633 211100 0001
Q ss_pred cchhHHH--hhHHHHHhhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHH-H
Q 004721 291 QTYGSLL--KNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEY-L 367 (733)
Q Consensus 291 ~~~~~~~--~~l~~~~~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~-~ 367 (733)
..|..+. ..+..+..++.+++|++..+...........++++|+.+|++|++|++||||++... ...++.+++ +
T Consensus 256 ~~~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~l~---~~~~d~~~~~~ 332 (356)
T 1ydy_A 256 YNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLP---EYTPDVNQLYD 332 (356)
T ss_dssp CCCGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTSCC---TTCSSHHHHHH
T ss_pred cchhhhcchhhHHHHHhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCEEEEEEECccccc---ccccCHHHHHH
Confidence 1233332 246666778888998877665321111122346799999999999999999986221 112345666 6
Q ss_pred H-HHhcCCcccceEEecCCCCccccc
Q 004721 368 S-FIDNGDFSVDGVLSDFPLTPSAAV 392 (733)
Q Consensus 368 ~-l~~~G~~~VDgIiTD~P~~~~~~l 392 (733)
+ ++++| |||||||+|+++++++
T Consensus 333 ~~l~~~G---VDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 333 ALYNKAG---VNGLFTDFPDKAVKFL 355 (356)
T ss_dssp HHHTTSC---CSEEEESCHHHHHHHH
T ss_pred HHHHHcC---CCEEEeCCHHHHHHhh
Confidence 5 56899 9999999999887654
No 2
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=7.3e-48 Score=399.36 Aligned_cols=241 Identities=22% Similarity=0.293 Sum_probs=200.8
Q ss_pred CcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccccCc
Q 004721 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (733)
Q Consensus 406 ~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~~g 485 (733)
-+|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|
T Consensus 10 ~~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~------------------~~g 71 (252)
T 2pz0_A 10 MKTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTN------------------GEG 71 (252)
T ss_dssp -CCEEEEETTTTTTSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSS------------------CCS
T ss_pred CCceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCCcccccCC------------------CCc
Confidence 36899999999999999999999999999999999999999999999999999999999 777
Q ss_pred ccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHH
Q 004721 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSV 565 (733)
Q Consensus 486 ~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v 565 (733)
.|.++||+||++|+++.|. ++.|.+ ++||||+|+|+++++. + +.++||||.+... ...+++++
T Consensus 72 -~v~~~t~~eL~~l~~~~~~---------~~~~~~-~~iPtL~evL~~~~~~-~-~~l~iEiK~~~~~----~~~~~~~v 134 (252)
T 2pz0_A 72 -FVKDFTLEEIKKLDAGIKF---------GEKFAG-ERIPTLYEVFELIGDK-D-FLVNIEIKSGIVL----YPGIEEKL 134 (252)
T ss_dssp -BGGGSCHHHHTTSCSSTTT---------CGGGTT-CCCCBHHHHHHHHTTS-C-CEEEEEECCSSCC----CTTHHHHH
T ss_pred -chhhCcHHHHhhcCCCCCC---------CCCCCC-CcCCCHHHHHHHhhhc-C-CeEEEEeCCCCcc----cHHHHHHH
Confidence 8999999999999997552 235564 8999999999999763 3 3899999976421 13588999
Q ss_pred HHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCcccc
Q 004721 566 MEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFI 644 (733)
Q Consensus 566 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~~l 644 (733)
+++++++++. ++|+++||++..|+.+++. |++++++++.....+. .. ++..+++ ..+.+. +.
T Consensus 135 ~~~l~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~----~~----~~~~~~~--~~i~~~---~~ 197 (252)
T 2pz0_A 135 IKAIKEYNFE----ERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEP----WH----MALRMEA--YSLHPF---YF 197 (252)
T ss_dssp HHHHHHTTCT----TTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSST----HH----HHHHTTC--SEEEEB---GG
T ss_pred HHHHHhcCCC----CCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccccH----HH----HHHHcCC--eEEecc---hh
Confidence 9999999988 7999999999999999999 9999999987543221 11 2222332 233332 22
Q ss_pred ccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHHhh
Q 004721 645 TSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRSKL 712 (733)
Q Consensus 645 ~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~~~ 712 (733)
..++++++.+|++|++|++||+|++. ++.+++ ++||||||||+|+.+.++++++
T Consensus 198 ~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GvdgIiTD~P~~~~~~l~~~ 251 (252)
T 2pz0_A 198 NIIPELVEGCKKNGVKLFPWTVDRKE-------------DMERMI-KAGVDGIITDDPETLINLVRKG 251 (252)
T ss_dssp GCCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHC--
T ss_pred cCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HcCCCEEEcCCHHHHHHHHhhc
Confidence 34689999999999999999999987 888886 9999999999999999998765
No 3
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=4.9e-47 Score=393.00 Aligned_cols=245 Identities=17% Similarity=0.178 Sum_probs=201.7
Q ss_pred CcCCcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccc
Q 004721 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (733)
Q Consensus 403 ~~~~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~ 482 (733)
..++.|.||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+||
T Consensus 5 ~~~~~p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~------------------ 66 (252)
T 3qvq_A 5 AYSFLPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTD------------------ 66 (252)
T ss_dssp GGGGCCSEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSS------------------
T ss_pred cCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCCccccccC------------------
Confidence 34567899999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHH
Q 004721 483 GSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVT 562 (733)
Q Consensus 483 ~~g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 562 (733)
++| .|.++||+||++|+++.|. ++.|.+ ++||||+|+|+++++. + +.++||||...... ..++
T Consensus 67 ~~~-~v~~~t~~el~~l~~~~~~---------~~~~~~-~~iptL~evl~~~~~~-~-~~l~iEiK~~~~~~----~~~~ 129 (252)
T 3qvq_A 67 GDG-LIYKTPLAELKQLDAGSWK---------GQEYQQ-ETIPTLLEAIEVISQY-G-MGLNLELKPCEGLE----EETI 129 (252)
T ss_dssp CCS-BGGGSCHHHHTTSCSSTTT---------CGGGTT-CCCCBHHHHHHHHHHT-T-CEEEEEECCCTTCH----HHHH
T ss_pred CCc-eeecCcHHHHhcCCCCCcc---------CccCCC-CcCcCHHHHHHHHhcc-C-cEEEEEecCCCCcc----HHHH
Confidence 777 8999999999999997652 345664 8999999999999864 3 38999999643211 1467
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCc
Q 004721 563 NSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNS 641 (733)
Q Consensus 563 ~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~ 641 (733)
+.+.+++++++... ++|+++||+++.|+.+++. |++++++++.....+ .. .++..+++ ..+.+.
T Consensus 130 ~~v~~~l~~~~~~~---~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~----~~----~~~~~~~~--~~i~~~-- 194 (252)
T 3qvq_A 130 AASVEVLKQHWPQD---LPLLFSSFNYFALVSAKALWPEIARGYNVSAIPSA----WQ----ERLEHLDC--AGLHIH-- 194 (252)
T ss_dssp HHHHHHHHHHSCTT---SCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCTT----HH----HHHHHHTC--SEEEEE--
T ss_pred HHHHHHHHHhCccc---CCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCchh----HH----HHHHHcCC--eEEecc--
Confidence 78899999987641 4899999999999999999 999999998643211 11 22223332 233332
Q ss_pred cccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHHhh
Q 004721 642 AFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRSKL 712 (733)
Q Consensus 642 ~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~~~ 712 (733)
+...++++|+.+|++|++|++||+|+++ ++.+++ ++||||||||+|+.+.++++++
T Consensus 195 -~~~~~~~~v~~~~~~G~~v~~WTvn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~l~~~ 250 (252)
T 3qvq_A 195 -QSFFDVQQVSDIKAAGYKVLAFTINDES-------------LALKLY-NQGLDAVFSDYPQKIQSAIDSH 250 (252)
T ss_dssp -GGGCCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HTTCCEEEESSHHHHHHHHHHC
T ss_pred -hhhCCHHHHHHHHHCCCEEEEEcCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHHHh
Confidence 2244789999999999999999999987 899997 9999999999999999999875
No 4
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=1.2e-47 Score=397.50 Aligned_cols=242 Identities=19% Similarity=0.181 Sum_probs=196.6
Q ss_pred ccccCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccc
Q 004721 84 WQTLTGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYL 163 (733)
Q Consensus 84 ~~~~~~~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~ 163 (733)
|++..+..|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||++|+|||++.+
T Consensus 2 ~~~~~~~~p~iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~~---------- 69 (252)
T 3qvq_A 2 MQSAYSFLPQVIAHRGSSGQAPENTLASLHLAGQQGIK--WVEIDVMLSGDGIPVIFHDDYLSRTTDGDG---------- 69 (252)
T ss_dssp CSSGGGGCCSEEEETTTTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECCCSBSTTTSSCCS----------
T ss_pred CcccCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCcEEEECCCccccccCCCc----------
Confidence 45556678999999999999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCCccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhC--CCceEeeccCchhhhhcCCcHHHHH
Q 004721 164 VNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFV 241 (733)
Q Consensus 164 ~~g~~~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~--~~~l~iEiK~~~~~~~~~~~~~~~v 241 (733)
.|.++||+||++|+++.|+ ++.|.| ++||||+|+|++++ +..++||||....... .+++.+
T Consensus 70 ---------~v~~~t~~el~~l~~~~~~---~~~~~~--~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~---~~~~~v 132 (252)
T 3qvq_A 70 ---------LIYKTPLAELKQLDAGSWK---GQEYQQ--ETIPTLLEAIEVISQYGMGLNLELKPCEGLEE---ETIAAS 132 (252)
T ss_dssp ---------BGGGSCHHHHTTSCSSTTT---CGGGTT--CCCCBHHHHHHHHHHTTCEEEEEECCCTTCHH---HHHHHH
T ss_pred ---------eeecCcHHHHhcCCCCCcc---CccCCC--CcCcCHHHHHHHHhccCcEEEEEecCCCCccH---HHHHHH
Confidence 7999999999999999875 456666 89999999999985 5789999995422111 366778
Q ss_pred HHHHhhcCC----ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHhhcccccCCcccc
Q 004721 242 LSVSRSVVV----NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYI 317 (733)
Q Consensus 242 ~~~l~~~~~----~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~~~~~~i 317 (733)
.+++++++. ++++||+++.|++++++.| ++++++ +..... ..+... +.. ..+.++++.+..+
T Consensus 133 ~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p--~~~~~~-l~~~~~------~~~~~~---~~~--~~~~~i~~~~~~~ 198 (252)
T 3qvq_A 133 VEVLKQHWPQDLPLLFSSFNYFALVSAKALWP--EIARGY-NVSAIP------SAWQER---LEH--LDCAGLHIHQSFF 198 (252)
T ss_dssp HHHHHHHSCTTSCEEEEESCHHHHHHHHHHCT--TSCEEE-ECSSCC------TTHHHH---HHH--HTCSEEEEEGGGC
T ss_pred HHHHHHhCcccCCEEEEeCCHHHHHHHHHHCC--CCcEEE-EEecCc------hhHHHH---HHH--cCCeEEecchhhC
Confidence 888888754 5999999999999999998 778876 332110 111111 111 1244455544332
Q ss_pred ccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccchh
Q 004721 318 WPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (733)
Q Consensus 318 ~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l~~ 394 (733)
++++|+.+|++|++|++||||++ ++|++++++| |||||||+|++++++++.
T Consensus 199 -----------~~~~v~~~~~~G~~v~~WTvn~~------------~~~~~l~~~G---VdgIiTD~P~~~~~~l~~ 249 (252)
T 3qvq_A 199 -----------DVQQVSDIKAAGYKVLAFTINDE------------SLALKLYNQG---LDAVFSDYPQKIQSAIDS 249 (252)
T ss_dssp -----------CHHHHHHHHHTTCEEEEECCCCH------------HHHHHHHHTT---CCEEEESSHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHcC---CCEEEeCCHHHHHHHHHH
Confidence 47899999999999999999864 8999999999 999999999999888765
No 5
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=1.9e-47 Score=396.20 Aligned_cols=235 Identities=20% Similarity=0.170 Sum_probs=193.6
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCCCC
Q 004721 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (733)
Q Consensus 90 ~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~ 169 (733)
-+|.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.+
T Consensus 10 ~~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~g---------------- 71 (252)
T 2pz0_A 10 MKTLVIAHRGDSKNVPENTIAAFKRAMELGAD--GIELDVQLTKDGHLVVIHDETVDRTTNGEG---------------- 71 (252)
T ss_dssp -CCEEEEETTTTTTSCTTSHHHHHHHHHHTCS--EEEEEEEECTTCCEEECSSSBSTTTSSCCS----------------
T ss_pred CCceEEEcCCCCCCCCcchHHHHHHHHHcCCC--EEEEEEEEecCCeEEEEcCCcccccCCCCc----------------
Confidence 47899999999999999999999999999999 999999999999999999999999999876
Q ss_pred CccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhC--CCceEeeccCchhhhhcCCcHHHHHHHHHhh
Q 004721 170 PGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRS 247 (733)
Q Consensus 170 ~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~--~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~ 247 (733)
.|.++||+||++|+++.|| ++.|.| ++||||+|+|++++ +..++||||.+... ...+++.+++++++
T Consensus 72 ---~v~~~t~~eL~~l~~~~~~---~~~~~~--~~iPtL~evL~~~~~~~~~l~iEiK~~~~~---~~~~~~~v~~~l~~ 140 (252)
T 2pz0_A 72 ---FVKDFTLEEIKKLDAGIKF---GEKFAG--ERIPTLYEVFELIGDKDFLVNIEIKSGIVL---YPGIEEKLIKAIKE 140 (252)
T ss_dssp ---BGGGSCHHHHTTSCSSTTT---CGGGTT--CCCCBHHHHHHHHTTSCCEEEEEECCSSCC---CTTHHHHHHHHHHH
T ss_pred ---chhhCcHHHHhhcCCCCCC---CCCCCC--CcCCCHHHHHHHhhhcCCeEEEEeCCCCcc---cHHHHHHHHHHHHh
Confidence 7999999999999999875 445666 89999999999996 47899999975322 12588999999999
Q ss_pred cCC---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHhhcccccCCccccccCCCcc
Q 004721 248 VVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESL 324 (733)
Q Consensus 248 ~~~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~~~~~~i~~~~~~~ 324 (733)
+++ ++++||++..|++++++.| +.+++++ ..... ..+... ++. ..+.++++++..+
T Consensus 141 ~~~~~~vii~SF~~~~l~~~~~~~p--~~~~~~l-~~~~~------~~~~~~---~~~--~~~~~i~~~~~~~------- 199 (252)
T 2pz0_A 141 YNFEERVIISSFNHYSLRDVKKMAP--HLKIGLL-YQCGL------VEPWHM---ALR--MEAYSLHPFYFNI------- 199 (252)
T ss_dssp TTCTTTEEEEESBHHHHHHHHHHCT--TSEEEEE-ECSBC------SSTHHH---HHH--TTCSEEEEBGGGC-------
T ss_pred cCCCCCEEEEeCCHHHHHHHHHHCC--CCCEEEE-ecCcc------ccHHHH---HHH--cCCeEEecchhcC-------
Confidence 876 4899999999999999998 6787763 32211 011111 111 1245566554433
Q ss_pred CCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccch
Q 004721 325 YLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (733)
Q Consensus 325 ~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l~ 393 (733)
++++|+.+|++|++|++||||++ +++++++++| |||||||+|+.++++++
T Consensus 200 ----~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---vdgIiTD~P~~~~~~l~ 249 (252)
T 2pz0_A 200 ----IPELVEGCKKNGVKLFPWTVDRK------------EDMERMIKAG---VDGIITDDPETLINLVR 249 (252)
T ss_dssp ----CHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHC
T ss_pred ----CHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHcC---CCEEEcCCHHHHHHHHh
Confidence 47899999999999999999864 8999999999 99999999999877664
No 6
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=6.3e-47 Score=399.84 Aligned_cols=250 Identities=21% Similarity=0.227 Sum_probs=202.9
Q ss_pred cCCcceEEecCCCCCCCCCchHHHHHHH-HHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccc
Q 004721 404 KSANLLVISKNGASGDYPSCTNLAYQKA-ISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (733)
Q Consensus 404 ~~~~~~iIaHRG~~~~~PENTl~Af~~A-~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~ 482 (733)
.+.+|.||||||+++.+||||++||++| ++.|||+||+|||+||||++||+||.+|+|+||
T Consensus 20 ~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~------------------ 81 (287)
T 2oog_A 20 TNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTN------------------ 81 (287)
T ss_dssp TSCSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSS------------------
T ss_pred CCCcceEEecCCCCCCCCchhHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCChhcccCC------------------
Confidence 3567899999999999999999999999 699999999999999999999999999999999
Q ss_pred cCcccccccCHHHHhccCccccCCCccccc-cCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcH
Q 004721 483 GSGIFSFSLIWDEIQTLIPQISNPYFKFKL-FRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSV 561 (733)
Q Consensus 483 ~~g~~i~d~T~~EL~~L~~~~~~~~~~~~~-~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~ 561 (733)
++| .|.++||+||++|+++.|.. ..++ .....|. +++||||+|+|+.+++. +.++||||.+... ..+
T Consensus 82 ~~g-~v~d~T~~eL~~l~~~~~f~--~~~p~~~~~~~~-~~~iPtL~evL~~~~~~---~~l~IEiK~~~~~-----~~~ 149 (287)
T 2oog_A 82 GHG-KVEDYTLDELKQLDAGSWFN--KKYPKYARASYK-NAKVPTLDEILERYGPN---ANYYIETKSPDVY-----PGM 149 (287)
T ss_dssp CCS-BGGGSCHHHHTTSCSSHHHH--HHCGGGCCGGGT-TCCCCBHHHHHHHHCTT---SCEEEECCCTTTS-----TTH
T ss_pred CCe-ehhhCcHHHHHhcCCCcccC--ccCccccccccC-CccCCCHHHHHHhhCcC---ceEEEEECCCCCc-----chH
Confidence 778 89999999999999985421 1111 1122345 48999999999999754 4899999976421 357
Q ss_pred HHHHHHHHHHcCC-------CCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccc-hhhhHHHHHHHHHHhHhcCC
Q 004721 562 TNSVMEALGNAGY-------NKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIR-DALNQTIEDIKKFADSVVLS 632 (733)
Q Consensus 562 ~~~v~~~l~~~~~-------~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~-~~~~~~l~~i~~~a~~i~~~ 632 (733)
+++++++|+++++ . ++|+|+||++..|.++++. |++++++++..... +.....++.+..++.++.+
T Consensus 150 ~~~v~~~l~~~~~~~~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~- 224 (287)
T 2oog_A 150 EEQLLASLKKHHLLNNNKLKN----GHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGP- 224 (287)
T ss_dssp HHHHHHHHHHTTCSSHHHHHT----TSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEE-
T ss_pred HHHHHHHHHHcCCcccccCCC----CCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhheEEcc-
Confidence 8899999999998 5 7999999999999999999 99999999865321 1222223333333333332
Q ss_pred CcccccCCccccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHHh
Q 004721 633 KESVYPLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRSK 711 (733)
Q Consensus 633 ~~~i~~~~~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~~ 711 (733)
.+...++++|+.+|++|+.|++||+|++. ++.+++ ++||||||||+|+.+.+++.+
T Consensus 225 ---------~~~~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~~~~ 280 (287)
T 2oog_A 225 ---------DYTDLTEQNTHHLKDLGFIVHPYTVNEKA-------------DMLRLN-KYGVDGVFTNFADKYKEVIKE 280 (287)
T ss_dssp ---------BGGGCCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHC
T ss_pred ---------cHhhcCHHHHHHHHHCCCeEEEEeCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHhc
Confidence 12234689999999999999999999987 899887 999999999999999998875
No 7
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=1.6e-46 Score=388.37 Aligned_cols=234 Identities=15% Similarity=0.125 Sum_probs=190.7
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCCCCC
Q 004721 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (733)
Q Consensus 91 ~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (733)
.|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.+
T Consensus 6 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~R~t~~~g----------------- 66 (247)
T 2otd_A 6 YPRIVAHRGGGKLAPENTLAAIDVGAKYGHK--MIEFDAKLSKDGEIFLLHDDNLERTSNGWG----------------- 66 (247)
T ss_dssp CCSEEETTTTTTSSCSSSHHHHHHHHHTTCS--EEEEEEEECTTCCEEECSSSBSSTTSSCCS-----------------
T ss_pred CCeEEECCCCCCCCCchhHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCCccccCCCCc-----------------
Confidence 5789999999999999999999999999999 999999999999999999999999999876
Q ss_pred ccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhC--CCceEeeccCchhhhhcCCcHHHHHHHHHhhc
Q 004721 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (733)
Q Consensus 171 g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~--~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~ 248 (733)
.|.++||+||++|+++.|+ ++.|.| ++||||+|+|++++ +..++||+|.+..... .+++.++++++++
T Consensus 67 --~v~~~t~~eL~~l~~g~~~---~~~~~~--~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~---~~~~~v~~~l~~~ 136 (247)
T 2otd_A 67 --VAGELNWQDLLRVDAGSWY---SKAFKG--EPLPLLSQVAERCREHGMMANIEIKPTTGTGP---LTGKMVALAARQL 136 (247)
T ss_dssp --BGGGSCHHHHTTCCSSTTT---CGGGTT--CCCCBHHHHHHHHHHTTCEEEEEECCCTTCHH---HHHHHHHHHHHHH
T ss_pred --cHhhCcHHHHhhCCCCCcc---CCCCCC--CcCCCHHHHHHHHHhcCCEEEEEECCCCCcch---HHHHHHHHHHHHH
Confidence 7999999999999999875 445666 89999999999995 5789999996543211 2567788888765
Q ss_pred --C--CceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHhhcccccCCccccccCCCcc
Q 004721 249 --V--VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESL 324 (733)
Q Consensus 249 --~--~~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~~~~~~i~~~~~~~ 324 (733)
+ .++++||++..|++++++.| +.++++ +.... +..+... +..+ .+.++++++..+
T Consensus 137 ~~~~~~v~i~Sf~~~~l~~~~~~~p--~~~~~~-l~~~~------~~~~~~~---~~~~--~~~~i~~~~~~~------- 195 (247)
T 2otd_A 137 WAGMTPPLLSSFEIDALEAAQQAAP--ELPRGL-LLDEW------RDDWREL---TARL--GCVSIHLNHKLL------- 195 (247)
T ss_dssp TTTSCCCEEEESCHHHHHHHHHHCT--TSCEEE-EESSC------CTTHHHH---HHHH--TCSEEEEEGGGC-------
T ss_pred hcCcCCEEEEcCCHHHHHHHHHHCC--CCCEEE-EecCC------cccHHHH---HHHc--CCeEEecChHhC-------
Confidence 3 35899999999999999998 677776 33211 1111111 1111 245565554332
Q ss_pred CCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccch
Q 004721 325 YLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (733)
Q Consensus 325 ~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l~ 393 (733)
++++|+.+|++|++|++||||++ +++++++++| |||||||+|+.++++++
T Consensus 196 ----~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---vdgI~TD~p~~~~~~l~ 245 (247)
T 2otd_A 196 ----DKARVMQLKDAGLRILVYTVNKP------------QHAAELLRWG---VDCICTDAIDVIGPNFT 245 (247)
T ss_dssp ----CHHHHHHHHHTTCEEEEECCCCH------------HHHHHHHHHT---CSEEEESCTTTSCTTCC
T ss_pred ----CHHHHHHHHHCCCEEEEEccCCH------------HHHHHHHHcC---CCEEEeCCHHHHHHHHh
Confidence 47899999999999999999864 8999999999 99999999999987765
No 8
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=4.2e-47 Score=401.19 Aligned_cols=253 Identities=19% Similarity=0.244 Sum_probs=202.5
Q ss_pred CCccc-ccCCCCCEEEEeCCCCCCCCccHHHHHHHH-HHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCcccccccc
Q 004721 81 TSRWQ-TLTGDPPFVVARGGFSGIFPDSSSIAYSLT-LITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQ 158 (733)
Q Consensus 81 ~~~~~-~~~~~~~~viaHRG~~~~~pENTl~af~~A-~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~ 158 (733)
.+.|. ++.+.+|+||||||+++.+||||++||+.| ++.|+| +||+|||+||||++||+||.+|+||||+.+
T Consensus 12 ~~~~~~~~~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~g----- 84 (287)
T 2oog_A 12 AIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKAS--YIEIDLQRTKDGHLVAMHDETVNRTTNGHG----- 84 (287)
T ss_dssp --CCCCCTTSCSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCS--EEEEEEEECTTCCEEECSSSBSTTTSSCCS-----
T ss_pred cccccccCCCCcceEEecCCCCCCCCchhHHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCChhcccCCCCe-----
Confidence 34453 456788999999999999999999999999 699999 999999999999999999999999999876
Q ss_pred ccccccCCCCCCccccccCCHHhhccccccccccCC-----CCCCCCCCcccccHHHHHHhhC-CCceEeeccCchhhhh
Q 004721 159 QKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSR-----TDKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQ 232 (733)
Q Consensus 159 ~~~~~~~g~~~~g~~v~d~T~~eL~~l~~~~~~~~~-----~~~~~g~~~~iptL~e~l~~~~-~~~l~iEiK~~~~~~~ 232 (733)
.|.++||+||++|+++.||... ...|.+ ++||||+|+|+.++ ++.++||||.+...
T Consensus 85 --------------~v~d~T~~eL~~l~~~~~f~~~~p~~~~~~~~~--~~iPtL~evL~~~~~~~~l~IEiK~~~~~-- 146 (287)
T 2oog_A 85 --------------KVEDYTLDELKQLDAGSWFNKKYPKYARASYKN--AKVPTLDEILERYGPNANYYIETKSPDVY-- 146 (287)
T ss_dssp --------------BGGGSCHHHHTTSCSSHHHHHHCGGGCCGGGTT--CCCCBHHHHHHHHCTTSCEEEECCCTTTS--
T ss_pred --------------ehhhCcHHHHHhcCCCcccCccCccccccccCC--ccCCCHHHHHHhhCcCceEEEEECCCCCc--
Confidence 7999999999999999876421 123455 89999999999986 47899999975432
Q ss_pred cCCcHHHHHHHHHhhcCC----------ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHH
Q 004721 233 HNLSMRSFVLSVSRSVVV----------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTF 302 (733)
Q Consensus 233 ~~~~~~~~v~~~l~~~~~----------~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 302 (733)
..+++.++++++++++ ++|+||+++.|++++++.| ++++++ ++...... .+. ...++.
T Consensus 147 --~~~~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p--~~~~~~-l~~~~~~~-----~~~--~~~~~~ 214 (287)
T 2oog_A 147 --PGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNK--HVPLVK-LVDKGELQ-----QFN--DQRLKE 214 (287)
T ss_dssp --TTHHHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCT--TSCEEE-EECTTTGG-----GCC--HHHHHH
T ss_pred --chHHHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCC--CCcEEE-EecCCccc-----ccC--HHHHHH
Confidence 2478899999999876 4899999999999999998 678776 33221100 000 012344
Q ss_pred HHhhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEe
Q 004721 303 IKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS 382 (733)
Q Consensus 303 ~~~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiT 382 (733)
+..++.++++++..+ ++++|+.+|++|++|++||||++ ++|++++++| ||||||
T Consensus 215 ~~~~~~~v~~~~~~~-----------~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---VdgIiT 268 (287)
T 2oog_A 215 IRSYAIGLGPDYTDL-----------TEQNTHHLKDLGFIVHPYTVNEK------------ADMLRLNKYG---VDGVFT 268 (287)
T ss_dssp HHTTCSEEEEBGGGC-----------CHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEE
T ss_pred HhhhheEEcccHhhc-----------CHHHHHHHHHCCCeEEEEeCCCH------------HHHHHHHHcC---CCEEEe
Confidence 555666676655433 47899999999999999999874 8899999999 999999
Q ss_pred cCCCCccccchhcc
Q 004721 383 DFPLTPSAAVDCFA 396 (733)
Q Consensus 383 D~P~~~~~~l~~~~ 396 (733)
|+|+.++++++.-.
T Consensus 269 D~P~~~~~~~~~~~ 282 (287)
T 2oog_A 269 NFADKYKEVIKEGH 282 (287)
T ss_dssp SCHHHHHHHHHC--
T ss_pred CCHHHHHHHHhccc
Confidence 99999888876644
No 9
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=1.7e-46 Score=388.41 Aligned_cols=242 Identities=12% Similarity=0.068 Sum_probs=201.2
Q ss_pred cceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccccCcc
Q 004721 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGI 486 (733)
Q Consensus 407 ~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~~g~ 486 (733)
.|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|| ++|
T Consensus 2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~------------------~~g- 62 (250)
T 3ks6_A 2 MTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTD------------------MTG- 62 (250)
T ss_dssp CCEEEEETTTHHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBS------------------CCS-
T ss_pred CceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCCccccccC------------------CCC-
Confidence 4789999999999999999999999999999999999999999999999999999999 677
Q ss_pred cccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHHH
Q 004721 487 FSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVM 566 (733)
Q Consensus 487 ~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~ 566 (733)
.|.++||+||++|+++.+ . +++||||+|+|+++++. + +.++||||.+.... ....++++++
T Consensus 63 ~v~~~t~~el~~l~~~~~--------------~-~~~iptL~evl~~~~~~-~-~~l~iEiK~~~~~~--~~~~~~~~v~ 123 (250)
T 3ks6_A 63 AIVDMTLAKVKTATIRYG--------------A-GSHPMTLEELCALYVDS-H-VNFRCEIKPGVDGL--PYEGFVALVI 123 (250)
T ss_dssp BGGGSCHHHHHHCCBTTS--------------T-TCCCEEHHHHHHHHTTC-S-CEEEEEECCCTTSC--CCTTHHHHHH
T ss_pred eeecCcHHHHhcCCCCCC--------------C-CccCcCHHHHHHHHhcc-C-cEEEEEeCCCcccC--cchHHHHHHH
Confidence 899999999999998753 2 48999999999999853 3 48999999753210 1236889999
Q ss_pred HHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCccccc
Q 004721 567 EALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFIT 645 (733)
Q Consensus 567 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~~l~ 645 (733)
++|+++++. ++++++||++..|+.+++. |+++++++..... ....+..+..++..+++. .+.+. +..
T Consensus 124 ~~l~~~~~~----~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~---~~~ 191 (250)
T 3ks6_A 124 AGLERHSML----ERTTFSSFLLASMDELWKATTRPRLWLVSPSVL---QQLGPGAVIETAIAHSIH--EIGVH---IDT 191 (250)
T ss_dssp HHHHHTTCG----GGEEEEESCHHHHHHHHHHCCSCEEEEECHHHH---HHHHHHHHHHHHHHTTCC--EEEEE---GGG
T ss_pred HHHHhcCCC----CCEEEEeCCHHHHHHHHHHCCCCcEEEEecccc---cccchhHHHHHHHhcCCC--EEecc---hhh
Confidence 999999988 8999999999999999999 9999987654210 011223344455555442 33332 234
Q ss_pred cchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHHhh
Q 004721 646 SATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRSKL 712 (733)
Q Consensus 646 ~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~~~ 712 (733)
.++++|+.+|++|++|++||+|+++ ++.+++ ++|||||+||+|+.+.+++++.
T Consensus 192 ~~~~~v~~~~~~G~~V~~WTvn~~~-------------~~~~l~-~~GVDgIiTD~P~~~~~~~~~~ 244 (250)
T 3ks6_A 192 ADAGLMAQVQAAGLDFGCWAAHTPS-------------QITKAL-DLGVKVFTTDRPTLAIALRTEH 244 (250)
T ss_dssp CCHHHHHHHHHTTCEEEEECCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-HcCCCEEEcCCHHHHHHHHHHh
Confidence 5789999999999999999999987 899987 9999999999999999998865
No 10
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=1.9e-46 Score=387.68 Aligned_cols=240 Identities=17% Similarity=0.083 Sum_probs=195.0
Q ss_pred CcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccccCc
Q 004721 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (733)
Q Consensus 406 ~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~~g 485 (733)
+.|.||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|| ++|
T Consensus 5 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~------------------~~g 66 (247)
T 2otd_A 5 PYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSN------------------GWG 66 (247)
T ss_dssp CCCSEEETTTTTTSSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSS------------------CCS
T ss_pred CCCeEEECCCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCccccCC------------------CCc
Confidence 45789999999999999999999999999999999999999999999999999999999 778
Q ss_pred ccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHH
Q 004721 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSV 565 (733)
Q Consensus 486 ~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v 565 (733)
.|.++||+||++|+++.|. ++.|.+ ++||||+|+|+++++. + +.++||||.+.... ..+++.+
T Consensus 67 -~v~~~t~~eL~~l~~g~~~---------~~~~~~-~~iptL~evl~~~~~~-~-~~l~iEiK~~~~~~----~~~~~~v 129 (247)
T 2otd_A 67 -VAGELNWQDLLRVDAGSWY---------SKAFKG-EPLPLLSQVAERCREH-G-MMANIEIKPTTGTG----PLTGKMV 129 (247)
T ss_dssp -BGGGSCHHHHTTCCSSTTT---------CGGGTT-CCCCBHHHHHHHHHHT-T-CEEEEEECCCTTCH----HHHHHHH
T ss_pred -cHhhCcHHHHhhCCCCCcc---------CCCCCC-CcCCCHHHHHHHHHhc-C-CEEEEEECCCCCcc----hHHHHHH
Confidence 8999999999999997542 245564 8999999999999854 3 38999999764321 1366789
Q ss_pred HHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCcccc
Q 004721 566 MEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFI 644 (733)
Q Consensus 566 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~~l 644 (733)
+++++++.... ++++++||++..|..+++. |++++++++.....+. .+ ++..+++ ..+.+. +.
T Consensus 130 ~~~l~~~~~~~---~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~----~~----~~~~~~~--~~i~~~---~~ 193 (247)
T 2otd_A 130 ALAARQLWAGM---TPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDDW----RE----LTARLGC--VSIHLN---HK 193 (247)
T ss_dssp HHHHHHHTTTS---CCCEEEESCHHHHHHHHHHCTTSCEEEEESSCCTTH----HH----HHHHHTC--SEEEEE---GG
T ss_pred HHHHHHHhcCc---CCEEEEcCCHHHHHHHHHHCCCCCEEEEecCCcccH----HH----HHHHcCC--eEEecC---hH
Confidence 99998872111 3899999999999999999 9999999986532211 12 2222332 223332 22
Q ss_pred ccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHH
Q 004721 645 TSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRS 710 (733)
Q Consensus 645 ~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~ 710 (733)
..++++++.+|++|++|++||+|++. ++.+++ ++||||||||+|+.+.++++
T Consensus 194 ~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~l~ 245 (247)
T 2otd_A 194 LLDKARVMQLKDAGLRILVYTVNKPQ-------------HAAELL-RWGVDCICTDAIDVIGPNFT 245 (247)
T ss_dssp GCCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HHTCSEEEESCTTTSCTTCC
T ss_pred hCCHHHHHHHHHCCCEEEEEccCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHh
Confidence 34689999999999999999999987 888887 99999999999998876654
No 11
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=4.5e-46 Score=404.90 Aligned_cols=292 Identities=22% Similarity=0.272 Sum_probs=218.3
Q ss_pred CCcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccccC
Q 004721 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (733)
Q Consensus 405 ~~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~~ 484 (733)
+.+|.||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+|+|+||++. .|++|+.+ .|+
T Consensus 28 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~-~f~~~~~~-----~g~ 101 (356)
T 1ydy_A 28 SNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVAD-RFPDRARK-----DGR 101 (356)
T ss_dssp -CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHH-HSTTCCCT-----TSC
T ss_pred CCCceEEEeCCCCCCCCcchHHHHHHHHHcCCCEEEeeeEECCCCcEEEeCCChHHhhcCccc-cccccccc-----CCC
Confidence 457899999999999999999999999999999999999999999999999999999999654 35555532 255
Q ss_pred cccccccCHHHHhccCccccCCC--cc---ccccCCcCCCCCccccCHHHHHHHHHhc-----CCCceEEEEecchhHHH
Q 004721 485 GIFSFSLIWDEIQTLIPQISNPY--FK---FKLFRNPKNKNAGKFMKLSDFLEMAKNA-----NSLSGVLISIENAVYLA 554 (733)
Q Consensus 485 g~~i~d~T~~EL~~L~~~~~~~~--~~---~~~~~~~~~~g~~~IptLeEvL~~~~~~-----~~~~~l~iEiK~~~~~~ 554 (733)
| +|.++||+||++|+++.|... +. .+..+.+...++++||||+|+|+++++. .+ ++++||||.+....
T Consensus 102 ~-~v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~-~~l~iEiK~~~~~~ 179 (356)
T 1ydy_A 102 Y-YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKN-IGIYPEIKAPWFHH 179 (356)
T ss_dssp C-BGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCC-CEEEEEECCHHHHH
T ss_pred c-chhhCcHHHHHhCCCCccccccccccccccccccccccCCCcCCCHHHHHHHHHHhhhcccCC-ceEEEeecCccccc
Confidence 6 899999999999999865210 00 0111222222358999999999999862 13 48999999876433
Q ss_pred hhcCCcHHHHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc------cCceEEEEeeccc-----------------
Q 004721 555 EKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK------TSYELVYKVKENI----------------- 611 (733)
Q Consensus 555 ~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~------p~~~~~~l~~~~~----------------- 611 (733)
. .+..++++++++|+++++... .++|+|+|||+..|+++|+. |++++++++....
T Consensus 180 ~-~~~~~~~~v~~~l~~~~~~~~-~~~v~i~SF~~~~l~~~~~~~~p~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 257 (356)
T 1ydy_A 180 Q-EGKDIAAKTLEVLKKYGYTGK-DDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYN 257 (356)
T ss_dssp H-TTCCHHHHHHHHHHHTTCCST-TSSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECC
T ss_pred c-cchhHHHHHHHHHHHcCCCCC-CCCEEEEcCCHHHHHHHHhhcccccCCCceEEEEeccCcccccccccccccccccc
Confidence 1 345689999999999998421 16999999999999999986 7899999986421
Q ss_pred -ch-hhhHHHHHHHHHHhHhcCCCcccccCC-ccccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHH
Q 004721 612 -RD-ALNQTIEDIKKFADSVVLSKESVYPLN-SAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTY 688 (733)
Q Consensus 612 -~~-~~~~~l~~i~~~a~~i~~~~~~i~~~~-~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~ 688 (733)
.+ .++..+..+..+++++++....+.+.. ......++++|+.+|++|++|++||||++. ++ .|..|+...+.++
T Consensus 258 ~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~--l~-~~~~d~~~~~~~~ 334 (356)
T 1ydy_A 258 YDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDK--LP-EYTPDVNQLYDAL 334 (356)
T ss_dssp CGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTS--CC-TTCSSHHHHHHHH
T ss_pred hhhhcchhhHHHHHhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCEEEEEEECccc--cc-ccccCHHHHHHHH
Confidence 00 022345566666777777654443211 011123588999999999999999999874 33 3556666433654
Q ss_pred HhhcCcCEEEeCChHHHHHHH
Q 004721 689 YEGAGIDGVITEFPMTAARYR 709 (733)
Q Consensus 689 l~~~GVdgIiTD~P~~~~~~l 709 (733)
+.++||||||||+|+.+.+++
T Consensus 335 l~~~GVDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 335 YNKAGVNGLFTDFPDKAVKFL 355 (356)
T ss_dssp HTTSCCSEEEESCHHHHHHHH
T ss_pred HHHcCCCEEEeCCHHHHHHhh
Confidence 459999999999999999876
No 12
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=1.5e-45 Score=394.02 Aligned_cols=283 Identities=17% Similarity=0.206 Sum_probs=209.5
Q ss_pred ccccCCCCCcCCcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcc
Q 004721 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSIT 474 (733)
Q Consensus 395 ~~~~~~~~~~~~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~ 474 (733)
|.+.+.......++.||||||+++.+||||++||++|+++|+|+||+|||+||||++||+||.+|+|+|+.+.
T Consensus 5 ~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~------- 77 (313)
T 3l12_A 5 FSQLEGLRGHPSVVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDG------- 77 (313)
T ss_dssp CGGGGGTCCBTTBCEEEEETTTTTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCT-------
T ss_pred CccccccccCCCCeEEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCchhcccccccC-------
Confidence 3344444455567899999999999999999999999999999999999999999999999999999976331
Q ss_pred ccccccc--ccCcccccccCHHHHhccCccccCCC---ccccccCCcCCCCCccccCHHHHHHHHHhcC--CCceEEEEe
Q 004721 475 TTIPEIM--AGSGIFSFSLIWDEIQTLIPQISNPY---FKFKLFRNPKNKNAGKFMKLSDFLEMAKNAN--SLSGVLISI 547 (733)
Q Consensus 475 ~~~~~~~--~~~g~~i~d~T~~EL~~L~~~~~~~~---~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~--~~~~l~iEi 547 (733)
+|. .+.+..|.++||+||++|+++.+.+. +.. .+....+. +++||||+|+|+++++.+ + +.++|||
T Consensus 78 ----~G~~~~~~~~~v~~~t~~eL~~l~~~~~~~~~~~~~~-~~~~~~~~-g~~iptL~evl~~~~~~~~~~-~~l~IEi 150 (313)
T 3l12_A 78 ----QGHWLTGAERQVAEMTYAEIRALDVGGLDGRTVYGRR-FPDQAFLT-GIHVPRLGELLDLCAGYGDQA-PYLLLEL 150 (313)
T ss_dssp ----TSCBCCSSCCBGGGSCHHHHHTSBCSSCCTTSHHHHH-STTSCCCS-SCCCCBHHHHHHHHHTTGGGC-CEEEEEE
T ss_pred ----CCcccCCCCcchhcCcHHHHhhCCCCCcccccccccc-CccccccC-CCcCCCHHHHHHHHHhcCCCC-ceEEEEE
Confidence 111 12224899999999999999863221 000 00111233 389999999999998731 3 4899999
Q ss_pred cchhHHHhh--cCCcHHHHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhh---HHH--
Q 004721 548 ENAVYLAEK--QGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALN---QTI-- 619 (733)
Q Consensus 548 K~~~~~~~~--~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~---~~l-- 619 (733)
|.+...... ....++++++++|+++++. ++|+|+||++..|++++++ |++++++++......... ...
T Consensus 151 K~~~~~~~~~~~~~~~~~~v~~~l~~~~~~----~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~ 226 (313)
T 3l12_A 151 KSDPALMHDHAARAEMVAAVLADVRRYRME----PRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPV 226 (313)
T ss_dssp CCCGGGTTCHHHHHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------
T ss_pred ccCCccccccccHHHHHHHHHHHHHHcCCC----CCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccc
Confidence 976432100 0025789999999999998 8999999999999999999 999999998653210000 000
Q ss_pred --------HHHHHHHhHhcCCCcccccCCccccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhh
Q 004721 620 --------EDIKKFADSVVLSKESVYPLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEG 691 (733)
Q Consensus 620 --------~~i~~~a~~i~~~~~~i~~~~~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~ 691 (733)
..+...+..+++ ..+.+. +...++++|+.+|++|++|++||||+++ ++.+++ +
T Consensus 227 ~~~~~~~~~~l~~~~~~~~~--~~~~~~---~~~~~~~~v~~~~~~Gl~V~~WTVn~~~-------------~~~~l~-~ 287 (313)
T 3l12_A 227 GPDYDRMTESLPQAVASAGG--QLWCPY---FLDVTPELVAEAHDLGLIVLTWTVNEPE-------------DIRRMA-T 287 (313)
T ss_dssp CCCTTTCCSCHHHHHHHHTC--SEEEEB---GGGCCHHHHHHHHHTTCEEEEBCCCSHH-------------HHHHHH-H
T ss_pred cccchhccccHHHHHHHhCC--cEEecc---hhcCCHHHHHHHHHCCCEEEEEcCCCHH-------------HHHHHH-H
Confidence 000112222332 233332 2245789999999999999999999997 899997 9
Q ss_pred cCcCEEEeCChHHHHHHHHhhcc
Q 004721 692 AGIDGVITEFPMTAARYRSKLVR 714 (733)
Q Consensus 692 ~GVdgIiTD~P~~~~~~l~~~~~ 714 (733)
+||||||||+|+.+++++++++.
T Consensus 288 ~GVDgIiTD~P~~~~~~l~~~g~ 310 (313)
T 3l12_A 288 TGVDGIVTDYPGRTQRILIDMGL 310 (313)
T ss_dssp HTCSEEEESCHHHHHHHHHHTTC
T ss_pred cCCCEEEeCCHHHHHHHHHhcCc
Confidence 99999999999999999998764
No 13
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=3.1e-45 Score=381.19 Aligned_cols=242 Identities=13% Similarity=0.116 Sum_probs=197.1
Q ss_pred CCcceEEecCCCC--CCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeecc---ccccccccCCCcCCCccccccc
Q 004721 405 SANLLVISKNGAS--GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI---NLINSTNAAQSKFNSITTTIPE 479 (733)
Q Consensus 405 ~~~~~iIaHRG~~--~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~---~L~rtt~v~~~~~~~r~~~~~~ 479 (733)
..+|+||||||++ +.+||||++||++|++.|||+||+|||+||||++||+||. +|+|+||
T Consensus 4 ~~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~--------------- 68 (258)
T 2o55_A 4 VIIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKD--------------- 68 (258)
T ss_dssp CCCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTT---------------
T ss_pred ccCceEEECCCCCCCCCCCccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCC---------------
Confidence 3568999999999 9999999999999999999999999999999999999999 9999999
Q ss_pred ccccCcccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcC-CCceEEEEecchhHHHhhcC
Q 004721 480 IMAGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNAN-SLSGVLISIENAVYLAEKQG 558 (733)
Q Consensus 480 ~~~~~g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~-~~~~l~iEiK~~~~~~~~~~ 558 (733)
++| .|.++||+||++|+++. +++||||+|+|+++++.+ + +.++||||.+.... ..
T Consensus 69 ---~~g-~v~~~t~~eL~~l~~~~-----------------~~~iptL~evl~~~~~~~~~-~~l~iEiK~~~~~~--~~ 124 (258)
T 2o55_A 69 ---GTS-RIGDLSLEELKRLDVGG-----------------GHTIPSLEELFVAIEEQKFN-LKLNLELKGEEWKR--KE 124 (258)
T ss_dssp ---TTC-BGGGSCHHHHTTCBSSS-----------------SCBCCBHHHHHHHHHHSCSC-CEEEEEECCSSSSS--TT
T ss_pred ---CCe-ehhhCcHHHHhhcCCCC-----------------CCccCCHHHHHHHhhhhcCc-eEEEEEEccCCccc--cc
Confidence 777 89999999999998751 489999999999999742 2 48999999754200 11
Q ss_pred CcHHHHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEe-ecccchhhhHHHHHHHHHHhHhcCCCccc
Q 004721 559 MSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKV-KENIRDALNQTIEDIKKFADSVVLSKESV 636 (733)
Q Consensus 559 ~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~-~~~~~~~~~~~l~~i~~~a~~i~~~~~~i 636 (733)
..+++.++++|+++++. ++|+|+||++..|+.++++ |++++++++ .....+.. ..+.. +..+++ ..+
T Consensus 125 ~~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~-~~~~~----~~~~~~--~~v 193 (258)
T 2o55_A 125 SGDHQRLLLLVEKYHMQ----ERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTPL-DFVEQ----ACYGDA--NGV 193 (258)
T ss_dssp SSHHHHHHHHHHTTTCG----GGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCCT-THHHH----HHHTTC--SEE
T ss_pred hHHHHHHHHHHHHcCCC----CCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCCHH-HHHHH----HHhcCC--eEE
Confidence 36889999999999988 8999999999999999999 999999998 43211110 01111 222322 223
Q ss_pred ccCCccccccchHHHHHHHHCCCcEEEEec----CCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHHhh
Q 004721 637 YPLNSAFITSATDIVQRLQSFKLPVYVETF----SNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRSKL 712 (733)
Q Consensus 637 ~~~~~~~l~~~~~~v~~~~~~Gl~v~~wTv----n~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~~~ 712 (733)
.+. +...++++|+.+|++|++|++||+ |++. ++.+++ ++|||||+||+|+.+.+++++.
T Consensus 194 ~~~---~~~~~~~~v~~~~~~G~~v~~wTv~~~~n~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~l~~~ 256 (258)
T 2o55_A 194 SML---FHYLTKEQVCTAHEKGLSVTVWMPWIFDDSEE-------------DWKKCL-ELQVDLICSNYPFGLMNFLSNI 256 (258)
T ss_dssp EEE---GGGCCHHHHHHHHHTTCEEEEECCTTCCCCHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHTC-
T ss_pred ecC---hhhcCHHHHHHHHHCCCEEEEeeCCCCCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHHHh
Confidence 332 223468999999999999999999 7776 888886 9999999999999999999865
Q ss_pred c
Q 004721 713 V 713 (733)
Q Consensus 713 ~ 713 (733)
+
T Consensus 257 ~ 257 (258)
T 2o55_A 257 S 257 (258)
T ss_dssp -
T ss_pred c
Confidence 4
No 14
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=1.6e-45 Score=393.77 Aligned_cols=263 Identities=15% Similarity=0.151 Sum_probs=194.7
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCCCC
Q 004721 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (733)
Q Consensus 90 ~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~ 169 (733)
+++.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||++|+|||+... +|..+
T Consensus 16 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d--~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~-----------~G~~~ 82 (313)
T 3l12_A 16 SVVRVIGHRGARGVMPENTLEGFAFTLAAGVR--ALEFDVVMTADGVPVVTHNHHLANAMTRDG-----------QGHWL 82 (313)
T ss_dssp TBCEEEEETTTTTTSCTTCHHHHHHHHHTTCC--EEEEEEEECTTSCEEECSSSBCCTTTCBCT-----------TSCBC
T ss_pred CCeEEEEcCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCCEEEECCchhcccccccC-----------CCccc
Confidence 56889999999999999999999999999999 999999999999999999999999964322 12111
Q ss_pred C--ccccccCCHHhhcccccccccc------CC--CCCCCCCCcccccHHHHHHhhC-----CCceEeeccCchhhhhc-
Q 004721 170 P--GWFSIDYTLNDLSNIILNQGVY------SR--TDKFDGNGFQILTVQDMARQIK-----PPGLWLNIQHDAFYAQH- 233 (733)
Q Consensus 170 ~--g~~v~d~T~~eL~~l~~~~~~~------~~--~~~~~g~~~~iptL~e~l~~~~-----~~~l~iEiK~~~~~~~~- 233 (733)
+ ++.|.++||+||++|+++.|.. .+ ...+.| ++||||+|+|++++ ++.++||||.+......
T Consensus 83 ~~~~~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~~g--~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~~~~~~ 160 (313)
T 3l12_A 83 TGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTG--IHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDH 160 (313)
T ss_dssp CSSCCBGGGSCHHHHHTSBCSSCCTTSHHHHHSTTSCCCSS--CCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTCH
T ss_pred CCCCcchhcCcHHHHhhCCCCCccccccccccCccccccCC--CcCCCHHHHHHHHHhcCCCCceEEEEEccCCcccccc
Confidence 1 2589999999999999997321 01 112334 89999999999985 47899999976432210
Q ss_pred --CCcHHHHHHHHHhhcCC---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCC------C-CCcchhHHHhhH-
Q 004721 234 --NLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEP------T-TNQTYGSLLKNL- 300 (733)
Q Consensus 234 --~~~~~~~v~~~l~~~~~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~------~-~~~~~~~~~~~l- 300 (733)
...+++.++++|+++++ ++|+||+++.|++++++.| +++++++......... . ....+......+
T Consensus 161 ~~~~~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~p--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 238 (313)
T 3l12_A 161 AARAEMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQAP--DLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLP 238 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCT--TSCEEEEECCCC-------------CCCTTTCCSCHH
T ss_pred ccHHHHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHCC--CCcEEEEeccccccccccccccccccccchhccccHH
Confidence 12578899999999886 4999999999999999998 7888863322110000 0 000000000001
Q ss_pred HHHHh-hcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccce
Q 004721 301 TFIKT-FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDG 379 (733)
Q Consensus 301 ~~~~~-~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDg 379 (733)
..++. .+.++++.+..+ ++++|+.+|++|++|++||||++ ++|++++++| |||
T Consensus 239 ~~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~Gl~V~~WTVn~~------------~~~~~l~~~G---VDg 292 (313)
T 3l12_A 239 QAVASAGGQLWCPYFLDV-----------TPELVAEAHDLGLIVLTWTVNEP------------EDIRRMATTG---VDG 292 (313)
T ss_dssp HHHHHHTCSEEEEBGGGC-----------CHHHHHHHHHTTCEEEEBCCCSH------------HHHHHHHHHT---CSE
T ss_pred HHHHHhCCcEEecchhcC-----------CHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHcC---CCE
Confidence 11111 145555554432 47899999999999999999874 8999999999 999
Q ss_pred EEecCCCCccccchhc
Q 004721 380 VLSDFPLTPSAAVDCF 395 (733)
Q Consensus 380 IiTD~P~~~~~~l~~~ 395 (733)
||||+|+.++++++..
T Consensus 293 IiTD~P~~~~~~l~~~ 308 (313)
T 3l12_A 293 IVTDYPGRTQRILIDM 308 (313)
T ss_dssp EEESCHHHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHhc
Confidence 9999999998887653
No 15
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=6.1e-46 Score=384.21 Aligned_cols=234 Identities=15% Similarity=0.073 Sum_probs=189.6
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCCCCC
Q 004721 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (733)
Q Consensus 91 ~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (733)
.|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||++|+|||++.+
T Consensus 2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~g----------------- 62 (250)
T 3ks6_A 2 MTRIASHRGGTLEFGDSTPHGFTATAAMALE--EVEFDLHPTADGAIVVHHDPTLDATTDMTG----------------- 62 (250)
T ss_dssp CCEEEEETTTHHHHCTTCHHHHHHHHTSSSS--EEEEEEEECTTSCEEECSSSBSTTTBSCCS-----------------
T ss_pred CceEEECCCCCCCCCcchHHHHHHHHHcCCC--EEEEEEeEccCCCEEEECCCccccccCCCC-----------------
Confidence 4889999999999999999999999999999 999999999999999999999999999876
Q ss_pred ccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhC--CCceEeeccCchhhhhcCCcHHHHHHHHHhhc
Q 004721 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (733)
Q Consensus 171 g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~--~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~ 248 (733)
.|.++||+||++|+++.| . +++||||+|+|++++ ++.++||||.+.... ....+++.++++++++
T Consensus 63 --~v~~~t~~el~~l~~~~~--------~--~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~v~~~l~~~ 129 (250)
T 3ks6_A 63 --AIVDMTLAKVKTATIRYG--------A--GSHPMTLEELCALYVDSHVNFRCEIKPGVDGL-PYEGFVALVIAGLERH 129 (250)
T ss_dssp --BGGGSCHHHHHHCCBTTS--------T--TCCCEEHHHHHHHHTTCSCEEEEEECCCTTSC-CCTTHHHHHHHHHHHT
T ss_pred --eeecCcHHHHhcCCCCCC--------C--CccCcCHHHHHHHHhccCcEEEEEeCCCcccC-cchHHHHHHHHHHHhc
Confidence 799999999999999865 2 489999999999995 588999999753211 1236889999999999
Q ss_pred CC---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHhh-----cccccCCccccccC
Q 004721 249 VV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-----ASGILVPKDYIWPV 320 (733)
Q Consensus 249 ~~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~-----a~~i~~~~~~i~~~ 320 (733)
++ ++++||+++.|++++++.| ++++++ +.. .. .... ++..+..+ +..+++.+.
T Consensus 130 ~~~~~v~~~SF~~~~l~~~~~~~p--~~~~~l-~~~-~~------~~~~----~~~~~~~~~~~~~~~~~~~~~~----- 190 (250)
T 3ks6_A 130 SMLERTTFSSFLLASMDELWKATT--RPRLWL-VSP-SV------LQQL----GPGAVIETAIAHSIHEIGVHID----- 190 (250)
T ss_dssp TCGGGEEEEESCHHHHHHHHHHCC--SCEEEE-ECH-HH------HHHH----HHHHHHHHHHHTTCCEEEEEGG-----
T ss_pred CCCCCEEEEeCCHHHHHHHHHHCC--CCcEEE-Eec-cc------cccc----chhHHHHHHHhcCCCEEecchh-----
Confidence 76 4899999999999999998 667653 221 00 0000 11112122 222333322
Q ss_pred CCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccchhcc
Q 004721 321 DESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFA 396 (733)
Q Consensus 321 ~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l~~~~ 396 (733)
..++++|+.+|++|++|++||||++ ++|++++++| |||||||+|+.++++++.+.
T Consensus 191 ------~~~~~~v~~~~~~G~~V~~WTvn~~------------~~~~~l~~~G---VDgIiTD~P~~~~~~~~~~~ 245 (250)
T 3ks6_A 191 ------TADAGLMAQVQAAGLDFGCWAAHTP------------SQITKALDLG---VKVFTTDRPTLAIALRTEHR 245 (250)
T ss_dssp ------GCCHHHHHHHHHTTCEEEEECCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHHHHH
T ss_pred ------hCCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHcC---CCEEEcCCHHHHHHHHHHhh
Confidence 2357899999999999999999874 8999999999 99999999999998887654
No 16
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=7.5e-45 Score=373.12 Aligned_cols=232 Identities=14% Similarity=0.129 Sum_probs=191.7
Q ss_pred CcceEEecCCC--CCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCccccccccccc
Q 004721 406 ANLLVISKNGA--SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG 483 (733)
Q Consensus 406 ~~~~iIaHRG~--~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~ 483 (733)
++|.||||||+ ++.+||||++||++|++.|+|+||+|||+||||++||+||.+++| +
T Consensus 3 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~--~------------------- 61 (238)
T 3no3_A 3 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG--K------------------- 61 (238)
T ss_dssp CCCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETT--E-------------------
T ss_pred CCCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCC--C-------------------
Confidence 46899999999 689999999999999999999999999999999999999999986 3
Q ss_pred CcccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHH
Q 004721 484 SGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTN 563 (733)
Q Consensus 484 ~g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 563 (733)
.|.++||+||++|+++. +++||||+|+|+++++.++. .++||||.+.... ....+++
T Consensus 62 ---~v~~~t~~el~~l~~~~-----------------~~~iptL~evl~~~~~~~~~-~l~iEiK~~~~~~--~~~~~~~ 118 (238)
T 3no3_A 62 ---HIQSCTYDELKDLQLSN-----------------GEKLPTLEQYLKRAKKLKNI-RLIFELKSHDTPE--RNRDAAR 118 (238)
T ss_dssp ---EGGGSCHHHHTTCBCTT-----------------SCBCCBHHHHHHHHHHCTTC-EEEEEECCCSSHH--HHHHHHH
T ss_pred ---ChHhCCHHHHhhCCCCC-----------------CCcCCcHHHHHHHHhhcCCc-eEEEEeCCCCCcc--hhHHHHH
Confidence 78999999999998742 47999999999999986443 8999999764211 1125788
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCcc
Q 004721 564 SVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSA 642 (733)
Q Consensus 564 ~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~ 642 (733)
.++++++++++. ++++++||++..|+.++++ |++++++++... .+ ..++. .+. ..+.+.. .
T Consensus 119 ~v~~~l~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~----~~---~~~~~----~~~--~~~~~~~-~ 180 (238)
T 3no3_A 119 LSVQMVKRMKLA----KRTDYISFNMDACKEFIRLCPKSEVSYLNGEL----SP---MELKE----LGF--TGLDYHY-K 180 (238)
T ss_dssp HHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEECSSCS----CH---HHHHH----TTC--CEEEEEH-H
T ss_pred HHHHHHHHcCCc----CCEEEEECCHHHHHHHHHHCCCCeEEEEeCCC----CH---HHHHH----CCC--ceEeccH-H
Confidence 999999999998 8999999999999999999 999999987542 11 12222 121 1122211 1
Q ss_pred ccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHHhhc
Q 004721 643 FITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRSKLV 713 (733)
Q Consensus 643 ~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~~~~ 713 (733)
.+..++++|+.+|++|++|++||+|++. ++.+++ ++|||||+||+|+.+.+++++++
T Consensus 181 ~~~~~~~~v~~~~~~G~~v~~WTVn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~l~~r~ 237 (238)
T 3no3_A 181 VLQSHPDWVKDCKVLGMTSNVWTVDDPK-------------LMEEMI-DMGVDFITTDLPEETQKILHSRA 237 (238)
T ss_dssp HHHHSTTHHHHHHHTTCEEEEECCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HcCCCEEECCCHHHHHHHHHhcc
Confidence 1233678999999999999999999997 899997 99999999999999999998874
No 17
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.6e-45 Score=383.79 Aligned_cols=247 Identities=14% Similarity=0.142 Sum_probs=189.2
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCcc----ccCccccccccccccccC
Q 004721 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDN----ASNIAQIFKTQQKNYLVN 165 (733)
Q Consensus 90 ~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~r----tt~~~~~~~~~~~~~~~~ 165 (733)
.++.||||||+++.+||||++||++|++.|+| +||+|||+||||++||+||.+|+| +|++.+..+
T Consensus 7 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~~--------- 75 (272)
T 3ch0_A 7 ASFDIQGHRGCRGLLPENTIAAFTKALLLGVT--TLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTE--------- 75 (272)
T ss_dssp TTCEEEETTTTTTTSSTTSHHHHHHHHHHTCS--EEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCT---------
T ss_pred ccccEEecCCCCCCCCcccHHHHHHHHHcCCC--EEEEeeeEcCCCcEEEeCCCcccccccccCCCccccc---------
Confidence 35789999999999999999999999999999 999999999999999999999999 566543111
Q ss_pred CCCCCccccccCCHHhhccccccccccCCCCCCCCC---CcccccHHHHHHhhC----CCceEeeccCchhhhh----cC
Q 004721 166 GVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGN---GFQILTVQDMARQIK----PPGLWLNIQHDAFYAQ----HN 234 (733)
Q Consensus 166 g~~~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~---~~~iptL~e~l~~~~----~~~l~iEiK~~~~~~~----~~ 234 (733)
....++.|.++||+||++|+++.|+ ++.|.+. ..+||||+|+|++++ ++.++||||.+..... ..
T Consensus 76 -~~~~~~~v~d~t~~eL~~l~~~~~~---~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~ 151 (272)
T 3ch0_A 76 -ANEKNFNLYAMNYADIKEIDVGMKT---HPRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNI 151 (272)
T ss_dssp -TTGGGSBGGGSCHHHHTTSCCSSSC---CTTCTTSCCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCH
T ss_pred -ccccCceeecCCHHHHHhcCCCCcc---CccCcccccCCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCcccccCccH
Confidence 1112458999999999999999876 3345441 238999999999985 5789999997653211 11
Q ss_pred CcHHHHHHHHHhhcCC---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHhhccccc
Q 004721 235 LSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGIL 311 (733)
Q Consensus 235 ~~~~~~v~~~l~~~~~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~ 311 (733)
..+++.++++++++++ ++++||+++.|++++++.| +.+++++ .... ..+.... +.+...+.+++
T Consensus 152 ~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p--~~~~~~l-~~~~-------~~~~~~~---~~~~~~~~~i~ 218 (272)
T 3ch0_A 152 ALFCDLVVAEIKKAHITDRFTLQSFDVRALEYMHSQYP--DIKLSYL-VETK-------GTLKKQL---EKLSFTPAVYS 218 (272)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCT--TSEEEEE-ECSS-------CCHHHHH---TTSSSCCSEEE
T ss_pred HHHHHHHHHHHHHcCCCCcEEEEeCCHHHHHHHHHHCC--CCcEEEE-ecCC-------CCHHHHH---HHcCCCCcEEc
Confidence 2368899999999876 4899999999999999998 6788763 3211 0111110 00000113444
Q ss_pred CCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccc
Q 004721 312 VPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA 390 (733)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~ 390 (733)
+++.. .++++|+.+|++|++|++||||++ ++|++++++| |||||||+|+++++
T Consensus 219 ~~~~~-----------~~~~~v~~~~~~Gl~v~~wTvn~~------------~~~~~l~~~G---vdgIiTD~P~~~~~ 271 (272)
T 3ch0_A 219 PDVTL-----------VSKKDIDAAHKLGMRVIPWTVNTK------------EEIETLISLG---VDGIITDYPDLFFE 271 (272)
T ss_dssp EBGGG-----------CCHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEESCGGGGTC
T ss_pred cchhh-----------cCHHHHHHHHHcCCEEEEeccCCH------------HHHHHHHHcC---CCEEEeCCHHHHhh
Confidence 43332 257899999999999999999864 8899999999 99999999998764
No 18
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=7.8e-45 Score=381.22 Aligned_cols=252 Identities=17% Similarity=0.188 Sum_probs=193.7
Q ss_pred CcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccc----cccCCCcCCCccccccccc
Q 004721 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINS----TNAAQSKFNSITTTIPEIM 481 (733)
Q Consensus 406 ~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rt----t~v~~~~~~~r~~~~~~~~ 481 (733)
.++.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+ |+... ..+.
T Consensus 7 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~----------~~~~ 76 (272)
T 3ch0_A 7 ASFDIQGHRGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGED----------VTEA 76 (272)
T ss_dssp TTCEEEETTTTTTTSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEE----------CCTT
T ss_pred ccccEEecCCCCCCCCcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCcc----------cccc
Confidence 357899999999999999999999999999999999999999999999999999994 33100 0001
Q ss_pred ccCcccccccCHHHHhccCccccCCCccccccCCcCCCC----CccccCHHHHHHHHHhcCCCceEEEEecchhHHHh--
Q 004721 482 AGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKN----AGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAE-- 555 (733)
Q Consensus 482 ~~~g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g----~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~-- 555 (733)
.+.++.|.++||+||++|+++.|.. +.|.+ .++||||+|+|+++++++..+.++||||.+.....
T Consensus 77 ~~~~~~v~d~t~~eL~~l~~~~~~~---------~~~~~~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~ 147 (272)
T 3ch0_A 77 NEKNFNLYAMNYADIKEIDVGMKTH---------PRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNID 147 (272)
T ss_dssp TGGGSBGGGSCHHHHTTSCCSSSCC---------TTCTTSCCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTT
T ss_pred cccCceeecCCHHHHHhcCCCCccC---------ccCcccccCCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCccccc
Confidence 1233489999999999999986532 12221 24899999999999874211489999997653100
Q ss_pred -hcCCcHHHHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCC
Q 004721 556 -KQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSK 633 (733)
Q Consensus 556 -~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~ 633 (733)
.....++++++++++++++. ++|+|+||++..|++++++ |++++++++.... + + ..++..++...
T Consensus 148 ~~~~~~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-~-----~---~~~~~~~~~~~ 214 (272)
T 3ch0_A 148 HPNIALFCDLVVAEIKKAHIT----DRFTLQSFDVRALEYMHSQYPDIKLSYLVETKG-T-----L---KKQLEKLSFTP 214 (272)
T ss_dssp BCCHHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSEEEEEECSSC-C-----H---HHHHTTSSSCC
T ss_pred CccHHHHHHHHHHHHHHcCCC----CcEEEEeCCHHHHHHHHHHCCCCcEEEEecCCC-C-----H---HHHHHHcCCCC
Confidence 00014788999999999988 8999999999999999999 9999999986421 1 1 12333333211
Q ss_pred cccccCCccccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHH
Q 004721 634 ESVYPLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAA 706 (733)
Q Consensus 634 ~~i~~~~~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~ 706 (733)
..+.+. +...++++|+.+|++|++|++||+|++. ++.+++ ++||||||||+|+.++
T Consensus 215 ~~i~~~---~~~~~~~~v~~~~~~Gl~v~~wTvn~~~-------------~~~~l~-~~GvdgIiTD~P~~~~ 270 (272)
T 3ch0_A 215 AVYSPD---VTLVSKKDIDAAHKLGMRVIPWTVNTKE-------------EIETLI-SLGVDGIITDYPDLFF 270 (272)
T ss_dssp SEEEEB---GGGCCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCGGGGT
T ss_pred cEEccc---hhhcCHHHHHHHHHcCCEEEEeccCCHH-------------HHHHHH-HcCCCEEEeCCHHHHh
Confidence 334332 2234689999999999999999999987 888886 9999999999999864
No 19
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=2.5e-44 Score=379.05 Aligned_cols=252 Identities=15% Similarity=0.192 Sum_probs=200.0
Q ss_pred cCCcceEEecCCCCC-CCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccc
Q 004721 404 KSANLLVISKNGASG-DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (733)
Q Consensus 404 ~~~~~~iIaHRG~~~-~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~ 482 (733)
.+.+|+||||||+++ .+||||++||+.|++.|+|+||+|||+||||++||+||.+|+|+||
T Consensus 28 ~~~~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~------------------ 89 (292)
T 3mz2_A 28 DDRIPLISGHRGGRGKGYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTLERTSN------------------ 89 (292)
T ss_dssp TTCCCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSSSSTTTBS------------------
T ss_pred CCCCCEEEECCCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCchhcccCC------------------
Confidence 345789999999985 7999999999999999999999999999999999999999999999
Q ss_pred cCcccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHH
Q 004721 483 GSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVT 562 (733)
Q Consensus 483 ~~g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 562 (733)
++| .|.++||+||++|+++.+.+ .+. +++||||+|+|+++++. +.++||+|... .
T Consensus 90 ~~g-~v~~~t~~el~~l~~~~~~~----------~~~-~~~iptL~evl~~~~~~---~~l~iE~K~~~----------~ 144 (292)
T 3mz2_A 90 GTG-KVSDYTWEELQNFRLKDPEG----------NIT-NYRIPTLEEAIRWARGK---TILILDKKDVP----------M 144 (292)
T ss_dssp CCS-CGGGSCHHHHTTSCBBCTTC----------CBC-SCCCCBHHHHHHHHTTT---CCEEECCSSSC----------H
T ss_pred CCC-chhhCcHHHHhcCCCCCCCC----------ccC-CcCCCCHHHHHHHhCCC---cEEEEEECCCc----------H
Confidence 677 89999999999999875421 234 48999999999999875 47999999752 2
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCC----cccc
Q 004721 563 NSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSK----ESVY 637 (733)
Q Consensus 563 ~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~----~~i~ 637 (733)
+.++++|+++++. ++|+++||++..|+.+++. |++++++++... ..++.+.. .+.+. ..+.
T Consensus 145 ~~v~~~l~~~~~~----~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~------~~l~~~~~----~g~~~~~~~~~~~ 210 (292)
T 3mz2_A 145 ERTAQLITDMQAE----PYVMITVHDGASARFFYEKNPNFMFEAFVKTK------EAVQDYED----NGIPWSHIMAYVG 210 (292)
T ss_dssp HHHHHHHHHTTCT----TTEEEEESSHHHHHHHHHHCTTCCEEEECCSH------HHHHHHHH----TTCCGGGEEEEEE
T ss_pred HHHHHHHHHcCCC----CCEEEEECCHHHHHHHHHHCCCCeEEEEeCCH------HHHHHHHH----hCCChhheeeeec
Confidence 5789999999998 8999999999999999999 999999987531 11222221 11111 1122
Q ss_pred cCCccccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHHhhccccc
Q 004721 638 PLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRSKLVRKQT 717 (733)
Q Consensus 638 ~~~~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~~~~~~~~ 717 (733)
+ .+...++++|+.+|++|++|++||+|+.+.. .-..|+.++|.+++ ++|||||+||+|+.+.+++++...+.+
T Consensus 211 ~---~~~~~~~~~V~~ah~~G~~V~vWTv~t~d~~---~~~~~~~~~~~~L~-~~GVDgIiTD~P~~l~~~L~~~~~~~~ 283 (292)
T 3mz2_A 211 P---KITPEVREVIDMLHERGVMCMISTAPSDDKL---STPESRAEAYRMII-RQGVDIIESDRPIEVAEAISSLIPVSS 283 (292)
T ss_dssp S---SCCHHHHHHHHHHHHTTBCEEEECTTTGGGS---SSHHHHHHHHHHHH-HTTCCEEEESCHHHHHHHHGGGSCSSC
T ss_pred c---cccccCHHHHHHHHHCCCEEEEEeCCCcchh---hhccccHHHHHHHH-HcCCCEEEeCCHHHHHHHHHHhccCcc
Confidence 2 2233468999999999999999999986410 00012234788887 999999999999999999998765544
Q ss_pred cc
Q 004721 718 SL 719 (733)
Q Consensus 718 ~~ 719 (733)
..
T Consensus 284 ~~ 285 (292)
T 3mz2_A 284 SK 285 (292)
T ss_dssp TT
T ss_pred hh
Confidence 33
No 20
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=4.6e-46 Score=384.80 Aligned_cols=235 Identities=16% Similarity=0.074 Sum_probs=196.1
Q ss_pred ceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccccCccc
Q 004721 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (733)
Q Consensus 408 ~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~~g~~ 487 (733)
|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++| .
T Consensus 2 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~------------------~~g-~ 62 (248)
T 1zcc_A 2 TKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTN------------------GTG-P 62 (248)
T ss_dssp CEEEETTTTTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSS------------------CCS-B
T ss_pred CeEEECCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCccccccC------------------CCc-c
Confidence 679999999999999999999999999999999999999999999999999999999 777 7
Q ss_pred ccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHHHH
Q 004721 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVME 567 (733)
Q Consensus 488 i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 567 (733)
|.++||+||++|+++.+ ++||||+|+|+++++. + +.++||||.+.... ..+++.+++
T Consensus 63 v~~~t~~eL~~l~~g~~-----------------~~iptL~evl~~~~~~-~-~~l~iEiK~~~~~~----~~~~~~v~~ 119 (248)
T 1zcc_A 63 VGHMLSSEIDTLDAGGW-----------------FDDRFKGAIVPRLDAY-L-EHLRGRAGVYIELK----YCDPAKVAA 119 (248)
T ss_dssp STTSCHHHHTTSCSSTT-----------------TCGGGTTCCCCBHHHH-H-HHHTTTCEEEEEEE----ESCHHHHHH
T ss_pred hhhCCHHHHHhCCCCCC-----------------CCCCCHHHHHHHHHhc-C-cEEEEEeCCCCCcc----cHHHHHHHH
Confidence 99999999999998632 5899999999999873 2 37999999764200 126788999
Q ss_pred HHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCcccccc
Q 004721 568 ALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFITS 646 (733)
Q Consensus 568 ~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~~l~~ 646 (733)
+++++++. ++|+|+||++..|+.++++ |++++++++..... .. .++...++ ..+.+. +...
T Consensus 120 ~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~-----~~----~~~~~~~~--~~i~~~---~~~~ 181 (248)
T 1zcc_A 120 LVRHLGMV----RDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKS-----PS----LVGAVHHA--SIIEIT---PAQM 181 (248)
T ss_dssp HHHHHTCS----TTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSS-----TH----HHHHTTCC--SEEEEC---HHHH
T ss_pred HHHHhCCC----CCEEEEECCHHHHHHHHHHCCCCcEEEEecCCcc-----HH----HHHHHcCC--CEEEec---HHHh
Confidence 99999988 8999999999999999999 99999998754211 11 22222332 223332 2233
Q ss_pred -chHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHH-HHhhcCcCEEEeCChHHHHHHHHhhcccc
Q 004721 647 -ATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINT-YYEGAGIDGVITEFPMTAARYRSKLVRKQ 716 (733)
Q Consensus 647 -~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~-~l~~~GVdgIiTD~P~~~~~~l~~~~~~~ 716 (733)
++++++.+|++|++|++||+|++. ++.+ ++ ++|||||+||+|+.+.++++..+.+.
T Consensus 182 ~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~~l~-~~GvdgIiTD~p~~~~~~~~~~~~~~ 239 (248)
T 1zcc_A 182 RRPGIIEASRKAGLEIMVYYGGDDM-------------AVHREIA-TSDVDYINLDRPDLFAAVRSGMAELL 239 (248)
T ss_dssp HSHHHHHHHHHHTCEEEEECCCCCH-------------HHHHHHH-HSSCSEEEESCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHHH-HcCCCEEEECCHHHHHHHHHHhcchh
Confidence 689999999999999999999997 8998 75 99999999999999999998776553
No 21
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=1.1e-44 Score=377.01 Aligned_cols=239 Identities=15% Similarity=0.142 Sum_probs=189.6
Q ss_pred CCCCEEEEeCCCC--CCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCC---CCccccCccccccccccccc
Q 004721 89 GDPPFVVARGGFS--GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDL---KLDNASNIAQIFKTQQKNYL 163 (733)
Q Consensus 89 ~~~~~viaHRG~~--~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~---~l~rtt~~~~~~~~~~~~~~ 163 (733)
..+|+||||||++ +.+||||++||+.|++.|+| +||+|||+||||++||+||. +|+||||+.+
T Consensus 4 ~~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~g---------- 71 (258)
T 2o55_A 4 VIIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIP--YIETDLRVCKTGEIVLFHGTPEGTIPFYKDGTS---------- 71 (258)
T ss_dssp CCCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCC--EEEEEEEECTTSCEEECCCSTTSBCTTSTTTTC----------
T ss_pred ccCceEEECCCCCCCCCCCccHHHHHHHHHHcCcC--EEEEEEEEecCCeEEEEeCCCCccceeeCCCCe----------
Confidence 3568999999999 99999999999999999999 99999999999999999999 9999999875
Q ss_pred cCCCCCCccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhC----CCceEeeccCchhhhhcCCcHHH
Q 004721 164 VNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK----PPGLWLNIQHDAFYAQHNLSMRS 239 (733)
Q Consensus 164 ~~g~~~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~----~~~l~iEiK~~~~~~~~~~~~~~ 239 (733)
.|.++||+||++|+++. +++||||+|+|++++ ++.++||+|.+.... ....+++
T Consensus 72 ---------~v~~~t~~eL~~l~~~~------------~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~-~~~~~~~ 129 (258)
T 2o55_A 72 ---------RIGDLSLEELKRLDVGG------------GHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKR-KESGDHQ 129 (258)
T ss_dssp ---------BGGGSCHHHHTTCBSSS------------SCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSS-TTSSHHH
T ss_pred ---------ehhhCcHHHHhhcCCCC------------CCccCCHHHHHHHhhhhcCceEEEEEEccCCccc-cchHHHH
Confidence 79999999999999862 479999999999986 578999999654210 1135889
Q ss_pred HHHHHHhhcCC---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHH-hhcccccCCcc
Q 004721 240 FVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKD 315 (733)
Q Consensus 240 ~v~~~l~~~~~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~i~~~~~ 315 (733)
.++++++++++ ++|+||++..|++++++.| +.+++++........ +..+. .... ..+.++++.+.
T Consensus 130 ~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p--~~~~~~l~~~~~~~~---~~~~~------~~~~~~~~~~v~~~~~ 198 (258)
T 2o55_A 130 RLLLLVEKYHMQERVDYCSFHHEALAHLKALCP--DVKITYLFNYMGQPT---PLDFV------EQACYGDANGVSMLFH 198 (258)
T ss_dssp HHHHHHHTTTCGGGEEEEESSHHHHHHHHHHCT--TCEEEEECCTTSCCC---CTTHH------HHHHHTTCSEEEEEGG
T ss_pred HHHHHHHHcCCCCCEEEEeCCHHHHHHHHHHCC--CCcEEEEEeCCCCCC---HHHHH------HHHHhcCCeEEecChh
Confidence 99999999876 4899999999999999998 678776331211111 11110 1111 13455555443
Q ss_pred ccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccchh
Q 004721 316 YIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (733)
Q Consensus 316 ~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l~~ 394 (733)
.+ ++++|+.+|++|++|++|||.+. .|+.++|++++++| |||||||+|+.++++++.
T Consensus 199 ~~-----------~~~~v~~~~~~G~~v~~wTv~~~--------~n~~~~~~~l~~~G---vdgI~TD~p~~~~~~l~~ 255 (258)
T 2o55_A 199 YL-----------TKEQVCTAHEKGLSVTVWMPWIF--------DDSEEDWKKCLELQ---VDLICSNYPFGLMNFLSN 255 (258)
T ss_dssp GC-----------CHHHHHHHHHTTCEEEEECCTTC--------CCCHHHHHHHHHHT---CSEEEESCHHHHHHHHTC
T ss_pred hc-----------CHHHHHHHHHCCCEEEEeeCCCC--------CCCHHHHHHHHHcC---CCEEEeCCHHHHHHHHHH
Confidence 32 47899999999999999999210 02348999999999 999999999998877653
No 22
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=2.9e-44 Score=378.53 Aligned_cols=246 Identities=18% Similarity=0.176 Sum_probs=193.0
Q ss_pred ccccCCCCCEEEEeCCCCC-CCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCcccccccccccc
Q 004721 84 WQTLTGDPPFVVARGGFSG-IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNY 162 (733)
Q Consensus 84 ~~~~~~~~~~viaHRG~~~-~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~ 162 (733)
|.....++|+||||||+++ .+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|||++.+
T Consensus 24 ~~~~~~~~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d--~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~~g--------- 92 (292)
T 3mz2_A 24 YQYADDRIPLISGHRGGRGKGYPENSMETFENTLSYTPA--TFEIDPRLTKDSVIVLFHDDTLERTSNGTG--------- 92 (292)
T ss_dssp TBCCTTCCCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCC--EEEECEEECTTCCEEECCSSSSTTTBSCCS---------
T ss_pred HhCCCCCCCEEEECCCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEeECCCCcEEEECCchhcccCCCCC---------
Confidence 4445667899999999985 7999999999999999999 999999999999999999999999999876
Q ss_pred ccCCCCCCccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhCC-CceEeeccCchhhhhcCCcHHHHH
Q 004721 163 LVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFV 241 (733)
Q Consensus 163 ~~~g~~~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~~-~~l~iEiK~~~~~~~~~~~~~~~v 241 (733)
.|.++||+||++|+++.+. ..|.+ ++||||+|+|++++. ..++||+|... .+.+
T Consensus 93 ----------~v~~~t~~el~~l~~~~~~----~~~~~--~~iptL~evl~~~~~~~~l~iE~K~~~---------~~~v 147 (292)
T 3mz2_A 93 ----------KVSDYTWEELQNFRLKDPE----GNITN--YRIPTLEEAIRWARGKTILILDKKDVP---------MERT 147 (292)
T ss_dssp ----------CGGGSCHHHHTTSCBBCTT----CCBCS--CCCCBHHHHHHHHTTTCCEEECCSSSC---------HHHH
T ss_pred ----------chhhCcHHHHhcCCCCCCC----CccCC--cCCCCHHHHHHHhCCCcEEEEEECCCc---------HHHH
Confidence 7999999999999998653 23444 799999999999874 78999999642 3578
Q ss_pred HHHHhhcCC---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHhh-------ccccc
Q 004721 242 LSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-------ASGIL 311 (733)
Q Consensus 242 ~~~l~~~~~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~-------a~~i~ 311 (733)
+++++++++ ++++||+++.+++++++.| ++++++ +.. . .. .+..+... +..++
T Consensus 148 ~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p--~~~~~~-l~~-~------~~-------~l~~~~~~g~~~~~~~~~~~ 210 (292)
T 3mz2_A 148 AQLITDMQAEPYVMITVHDGASARFFYEKNP--NFMFEA-FVK-T------KE-------AVQDYEDNGIPWSHIMAYVG 210 (292)
T ss_dssp HHHHHHTTCTTTEEEEESSHHHHHHHHHHCT--TCCEEE-ECC-S------HH-------HHHHHHHTTCCGGGEEEEEE
T ss_pred HHHHHHcCCCCCEEEEECCHHHHHHHHHHCC--CCeEEE-EeC-C------HH-------HHHHHHHhCCChhheeeeec
Confidence 899999876 5999999999999999998 677775 221 1 01 11121111 11122
Q ss_pred CCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCcccc
Q 004721 312 VPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (733)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~ 391 (733)
+.+.. .++++|+.+|++|++|++||||+..... ...|+.++|++++++| |||||||+|+.++++
T Consensus 211 ~~~~~-----------~~~~~V~~ah~~G~~V~vWTv~t~d~~~--~~~~~~~~~~~L~~~G---VDgIiTD~P~~l~~~ 274 (292)
T 3mz2_A 211 PKITP-----------EVREVIDMLHERGVMCMISTAPSDDKLS--TPESRAEAYRMIIRQG---VDIIESDRPIEVAEA 274 (292)
T ss_dssp SSCCH-----------HHHHHHHHHHHTTBCEEEECTTTGGGSS--SHHHHHHHHHHHHHTT---CCEEEESCHHHHHHH
T ss_pred ccccc-----------cCHHHHHHHHHCCCEEEEEeCCCcchhh--hccccHHHHHHHHHcC---CCEEEeCCHHHHHHH
Confidence 22211 2478999999999999999998741000 0012346899999999 999999999999999
Q ss_pred chhcccc
Q 004721 392 VDCFAHL 398 (733)
Q Consensus 392 l~~~~~~ 398 (733)
++.++..
T Consensus 275 L~~~~~~ 281 (292)
T 3mz2_A 275 ISSLIPV 281 (292)
T ss_dssp HGGGSCS
T ss_pred HHHhccC
Confidence 9887643
No 23
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=9.9e-46 Score=382.30 Aligned_cols=229 Identities=14% Similarity=0.040 Sum_probs=188.3
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCCCCCc
Q 004721 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (733)
Q Consensus 92 ~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (733)
|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.+
T Consensus 2 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~Rtt~~~g------------------ 61 (248)
T 1zcc_A 2 TKIVSHRGANRFAPENTFAAADLALQQGAD--YIELDVRESADGVLYVIHDETLDRTTNGTG------------------ 61 (248)
T ss_dssp CEEEETTTTTTTSCSSSHHHHHHHHHTTCS--EEEEEEEECTTCCEEECSSSBTTTTSSCCS------------------
T ss_pred CeEEECCCCCCCCCchHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEECCCccccccCCCc------------------
Confidence 679999999999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhCC--CceEeeccCchhhhhcCCcHHHHHHHHHhhcC
Q 004721 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV 249 (733)
Q Consensus 172 ~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~~--~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~~ 249 (733)
.|.++||+||++|+++.+ ++||||+|+|++++. ..++||||.+... .. .+++.+++++++++
T Consensus 62 -~v~~~t~~eL~~l~~g~~------------~~iptL~evl~~~~~~~~~l~iEiK~~~~~-~~--~~~~~v~~~l~~~~ 125 (248)
T 1zcc_A 62 -PVGHMLSSEIDTLDAGGW------------FDDRFKGAIVPRLDAYLEHLRGRAGVYIEL-KY--CDPAKVAALVRHLG 125 (248)
T ss_dssp -BSTTSCHHHHTTSCSSTT------------TCGGGTTCCCCBHHHHHHHHTTTCEEEEEE-EE--SCHHHHHHHHHHHT
T ss_pred -chhhCCHHHHHhCCCCCC------------CCCCCHHHHHHHHHhcCcEEEEEeCCCCCc-cc--HHHHHHHHHHHHhC
Confidence 799999999999998764 599999999999864 6799999965321 11 26788999999987
Q ss_pred C---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHH-hhcccccCCccccccCCCccC
Q 004721 250 V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLY 325 (733)
Q Consensus 250 ~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~i~~~~~~i~~~~~~~~ 325 (733)
+ ++|+||++..+++++++.| +.+++++..... . . ....+ ..+.++++++..+
T Consensus 126 ~~~~v~i~Sf~~~~l~~~~~~~p--~~~~~~l~~~~~-------~-~------~~~~~~~~~~~i~~~~~~~-------- 181 (248)
T 1zcc_A 126 MVRDTFYFSFSEEMRQGLQSIAP--EFRRMMTLDIAK-------S-P------SLVGAVHHASIIEITPAQM-------- 181 (248)
T ss_dssp CSTTEEEECSCHHHHHHHHHHCT--TSEEEEEHHHHS-------S-T------HHHHHTTCCSEEEECHHHH--------
T ss_pred CCCCEEEEECCHHHHHHHHHHCC--CCcEEEEecCCc-------c-H------HHHHHHcCCCEEEecHHHh--------
Confidence 6 4899999999999999998 677776332110 0 0 01111 1245555554433
Q ss_pred CCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHH-HHhcCCcccceEEecCCCCccccchhccc
Q 004721 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLS-FIDNGDFSVDGVLSDFPLTPSAAVDCFAH 397 (733)
Q Consensus 326 ~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~-l~~~G~~~VDgIiTD~P~~~~~~l~~~~~ 397 (733)
.++++|+.+|++|++|++||||++ +++++ ++++| |||||||+|+.++++++....
T Consensus 182 --~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~~l~~~G---vdgIiTD~p~~~~~~~~~~~~ 237 (248)
T 1zcc_A 182 --RRPGIIEASRKAGLEIMVYYGGDD------------MAVHREIATSD---VDYINLDRPDLFAAVRSGMAE 237 (248)
T ss_dssp --HSHHHHHHHHHHTCEEEEECCCCC------------HHHHHHHHHSS---CSEEEESCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHHcC---CCEEEECCHHHHHHHHHHhcc
Confidence 036799999999999999999976 78999 99999 999999999999888876543
No 24
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=2.6e-44 Score=369.12 Aligned_cols=224 Identities=15% Similarity=0.150 Sum_probs=181.0
Q ss_pred CCCEEEEeCCC--CCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCC
Q 004721 90 DPPFVVARGGF--SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (733)
Q Consensus 90 ~~~~viaHRG~--~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~ 167 (733)
.+|.||||||+ ++.+||||++||+.|++.|+| +||+|||+||||++||+||++|+| +
T Consensus 3 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~~-----~-------------- 61 (238)
T 3no3_A 3 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAY--GSEFDVHLTADNVLVVYHDNDIQG-----K-------------- 61 (238)
T ss_dssp CCCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSEETT-----E--------------
T ss_pred CCCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCCCCC-----C--------------
Confidence 46899999999 589999999999999999999 999999999999999999999986 2
Q ss_pred CCCccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhC---CCceEeeccCchhhhhcCCcHHHHHHHH
Q 004721 168 PTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK---PPGLWLNIQHDAFYAQHNLSMRSFVLSV 244 (733)
Q Consensus 168 ~~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~---~~~l~iEiK~~~~~~~~~~~~~~~v~~~ 244 (733)
.|.++||+||++|+++. +++||||+|+|++++ +..++||||.+.... ....+++.++++
T Consensus 62 -----~v~~~t~~el~~l~~~~------------~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~v~~~ 123 (238)
T 3no3_A 62 -----HIQSCTYDELKDLQLSN------------GEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPE-RNRDAARLSVQM 123 (238)
T ss_dssp -----EGGGSCHHHHTTCBCTT------------SCBCCBHHHHHHHHHHCTTCEEEEEECCCSSHH-HHHHHHHHHHHH
T ss_pred -----ChHhCCHHHHhhCCCCC------------CCcCCcHHHHHHHHhhcCCceEEEEeCCCCCcc-hhHHHHHHHHHH
Confidence 69999999999999863 479999999999985 378999999654221 112478899999
Q ss_pred HhhcCC---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHh-hcccccCCccccccC
Q 004721 245 SRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPV 320 (733)
Q Consensus 245 l~~~~~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~i~~~~~~i~~~ 320 (733)
++++++ ++++||++..|++++++.| +.++++ +..... . ..++. .+.++.+.+..+.
T Consensus 124 l~~~~~~~~v~~~Sf~~~~l~~~~~~~p--~~~~~~-l~~~~~--------~-------~~~~~~~~~~~~~~~~~~~-- 183 (238)
T 3no3_A 124 VKRMKLAKRTDYISFNMDACKEFIRLCP--KSEVSY-LNGELS--------P-------MELKELGFTGLDYHYKVLQ-- 183 (238)
T ss_dssp HHHTTCGGGEEEEESCHHHHHHHHHHCT--TSCEEE-CSSCSC--------H-------HHHHHTTCCEEEEEHHHHH--
T ss_pred HHHcCCcCCEEEEECCHHHHHHHHHHCC--CCeEEE-EeCCCC--------H-------HHHHHCCCceEeccHHhhh--
Confidence 999986 4899999999999999998 678776 332110 0 11111 2333443322211
Q ss_pred CCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccchh
Q 004721 321 DESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (733)
Q Consensus 321 ~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l~~ 394 (733)
.++++|+.+|++|++|++||||++ ++|++++++| |||||||+|+.++++++.
T Consensus 184 -------~~~~~v~~~~~~G~~v~~WTVn~~------------~~~~~l~~~G---VdgIiTD~P~~~~~~l~~ 235 (238)
T 3no3_A 184 -------SHPDWVKDCKVLGMTSNVWTVDDP------------KLMEEMIDMG---VDFITTDLPEETQKILHS 235 (238)
T ss_dssp -------HSTTHHHHHHHTTCEEEEECCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHcC---CCEEECCCHHHHHHHHHh
Confidence 135699999999999999999874 8999999999 999999999999888765
No 25
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=3.1e-43 Score=360.20 Aligned_cols=219 Identities=20% Similarity=0.194 Sum_probs=178.0
Q ss_pred CcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccccCc
Q 004721 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (733)
Q Consensus 406 ~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~~g 485 (733)
...+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|
T Consensus 11 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~------------------~~g 72 (234)
T 1o1z_A 11 HHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFG------------------LDV 72 (234)
T ss_dssp CCCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHC------------------EEE
T ss_pred ceEEEEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCC------------------cCc
Confidence 35689999999999999999999999999999999999999999999999999999999 777
Q ss_pred ccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHH
Q 004721 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSV 565 (733)
Q Consensus 486 ~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v 565 (733)
.|.++||+||++|+ +++||||+|+|+++++. +.++||||.+. +++++
T Consensus 73 -~v~d~T~~eL~~l~--------------------~~~iptL~evL~~~~~~---~~l~iEiK~~~---------~~~~v 119 (234)
T 1o1z_A 73 -KIRDATVSELKELT--------------------DGKITTLKEVFENVSDD---KIINIEIKERE---------AADAV 119 (234)
T ss_dssp -EGGGSCHHHHHHHT--------------------TTCCCBHHHHHHHSCTT---SEEEEEECCGG---------GHHHH
T ss_pred -CcccCcHHHHhcCC--------------------CCCCCCHHHHHHhcccC---CeEEEEeCCcc---------HHHHH
Confidence 89999999999987 16899999999999875 48999999753 45778
Q ss_pred HHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccc-hhhhHHHHHHHHHHhHhcCCCcccccCCccc
Q 004721 566 MEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIR-DALNQTIEDIKKFADSVVLSKESVYPLNSAF 643 (733)
Q Consensus 566 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~-~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~~ 643 (733)
++++++ . ++|+++||+ ++.+++. |++++++++..... +. ...+.... .-.+ ..+.+.. ..
T Consensus 120 ~~~l~~---~----~~vii~Sf~---l~~~~~~~p~~~~~~l~~~~~~~~~----~~~~~~~~-~~~~--~~i~~~~-~~ 181 (234)
T 1o1z_A 120 LEISKK---R----KNLIFSSFD---LDLLDEKFKGTKYGYLIDEENYGSI----ENFVERVE-KERP--YSLHVPY-QA 181 (234)
T ss_dssp HHHHTT---C----CSEEEEESC---HHHHHHHCTTSCEEEECCTTTTCSH----HHHHHHHH-HHCC--SEEEEEG-GG
T ss_pred HHHHhc---c----CCEEEEchh---HHHHHhhCCCCcEEEEeccccccCH----HHHHHHcC-CCCC--CEEEeCH-HH
Confidence 888877 3 699999999 9999999 99999999865211 11 11122111 0000 1222211 11
Q ss_pred cccc--hHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHH
Q 004721 644 ITSA--TDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARY 708 (733)
Q Consensus 644 l~~~--~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~ 708 (733)
+..+ +++++.+|++|++|++||+|+++ ++.+++ ++ ||||+||+|+.++++
T Consensus 182 ~g~~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~-vdgIiTD~P~~~~~~ 233 (234)
T 1o1z_A 182 FELEYAVEVLRSFRKKGIVIFVWTLNDPE-------------IYRKIR-RE-IDGVITDEVELFVKL 233 (234)
T ss_dssp GGSHHHHHHHHHHHHTTCEEEEESCCCHH-------------HHHHHG-GG-CSEEEESCHHHHHHT
T ss_pred hcCCccHHHHHHHHHcCCEEEEeCCCCHH-------------HHHHHH-Hh-CCEEEcCCHHHHhhc
Confidence 1114 88999999999999999999987 889887 99 999999999999876
No 26
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.4e-42 Score=361.99 Aligned_cols=255 Identities=18% Similarity=0.146 Sum_probs=204.1
Q ss_pred cCCcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCccccccccccc
Q 004721 404 KSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG 483 (733)
Q Consensus 404 ~~~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~ 483 (733)
.+.+|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|| +
T Consensus 14 ~~~~~~iiaHRG~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~------------------~ 75 (278)
T 3i10_A 14 KSNKVLVVAHRGNWRSAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTT------------------G 75 (278)
T ss_dssp TCCSCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBS------------------C
T ss_pred CCCCCEEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCC------------------C
Confidence 4567899999999999999999999999999999999999999999999999999999999 7
Q ss_pred CcccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHH
Q 004721 484 SGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTN 563 (733)
Q Consensus 484 ~g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 563 (733)
+| .|.++||+||++|+++.+.+ .+. +++||||+|+|+++++. +.++||.+. .+++
T Consensus 76 ~g-~v~~~t~~el~~l~~~~~~~----------~~~-~~~iptL~evl~~~~~~---~~~nie~~~----------~~~~ 130 (278)
T 3i10_A 76 KG-EIKNWTLADIKKLKLKDKDG----------KVT-NYVVPTLEEALLTAKGK---IMVNLDKAY----------DIFD 130 (278)
T ss_dssp CS-BGGGSCHHHHTTSCBBCTTS----------CBC-SCCCCBHHHHHHHHTTT---SEEEEESCG----------GGHH
T ss_pred Cc-eeecCcHHHHhcCCCCCCCc----------ccC-CCCCCCHHHHHHHhcCC---eEEEEecCc----------hHHH
Confidence 77 89999999999999875421 233 48999999999999874 367776421 3678
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCC-cccccCCc
Q 004721 564 SVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSK-ESVYPLNS 641 (733)
Q Consensus 564 ~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~-~~i~~~~~ 641 (733)
+|+++|+++++. ++|+++|+ ..++.+++. |++++++++...+....+...+.+..|+..+.+.. ..+++..
T Consensus 131 ~v~~~l~~~~~~----~~v~i~s~--~~l~~~~~~~p~~~~~~l~~p~i~~~~~~~~~~i~~~~~~~~p~~~~~~~~~~- 203 (278)
T 3i10_A 131 DVYAILEKTETQ----NQVIMKGG--QPIETVKREFGSYLDKVLYMPVIDLGNKEAEKIITDYLKELRPAAFEIIYSDP- 203 (278)
T ss_dssp HHHHHHHHHTCG----GGEEEEES--SCHHHHHHHHGGGTTTSEEEEEEETTSTTHHHHHHHHHHHTCCSEEEEEBCCT-
T ss_pred HHHHHHHHcCCC----CeEEEEEh--HHHHHHHHHCcCCccceEEEeeecccccchHHHHHHHHHhcCceEEEEeecCC-
Confidence 899999999998 89999994 468899988 99887777654333333344566777877777642 2222221
Q ss_pred cccccchHHHHHHHHCCCcEEEEecCCcccccccccCC-----ChHHHHHHHHhhc-CcCEEEeCChHHHHHHHHhhcc
Q 004721 642 AFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFS-----DPTVEINTYYEGA-GIDGVITEFPMTAARYRSKLVR 714 (733)
Q Consensus 642 ~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~-----d~~~e~~~~l~~~-GVdgIiTD~P~~~~~~l~~~~~ 714 (733)
....+++++.+|++|++|++||+.+. +++.+.+ ||...|.+++ ++ |||+|+||+|+.+.+|+++++.
T Consensus 204 --~~~~~~~v~~~~~~g~~v~~nTlw~~---~~~g~~d~~a~~d~~~~~~~l~-~~~Gvd~I~TD~P~~l~~yL~~~~~ 276 (278)
T 3i10_A 204 --KNPLPPKIKQLLFKKSLIWYNTLWGS---LAGNHDDNLALTDPEKSYGYLI-EQLGARILQTDQPAYLLDYLRKKGW 276 (278)
T ss_dssp --TCSSHHHHHHHHTTTSEEEEECSSGG---GBTTCCHHHHHHCHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTS
T ss_pred --ccchHHHHHHHHHCCCEEEEEecccc---cccCccchhhccChHHHHHHHH-hcCCCCEEEeCCHHHHHHHHhhccc
Confidence 23347899999999999999997543 2333332 6777899987 88 9999999999999999998753
No 27
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=6.3e-43 Score=355.87 Aligned_cols=216 Identities=18% Similarity=0.180 Sum_probs=177.8
Q ss_pred CCcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccccccccCCCcCCCcccccccccccC
Q 004721 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (733)
Q Consensus 405 ~~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~rtt~v~~~~~~~r~~~~~~~~~~~ 484 (733)
.++|.||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+ ++
T Consensus 5 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~--~g-------------------- 62 (224)
T 1vd6_A 5 RQRPLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP--LG-------------------- 62 (224)
T ss_dssp --CCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET--TE--------------------
T ss_pred CCCceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC--CC--------------------
Confidence 45689999999999999999999999999999999999999999999999999998 33
Q ss_pred cccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHH-hcCCCceEEEEecchhHHHhhcCCcHHH
Q 004721 485 GIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAK-NANSLSGVLISIENAVYLAEKQGMSVTN 563 (733)
Q Consensus 485 g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~-~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 563 (733)
.|.++||+||++|+ ++||||+|+|++++ +. + +.++||||.+.... ..+++
T Consensus 63 --~v~~~t~~eL~~l~---------------------~~iptL~evl~~~~~~~-~-~~l~iEiK~~~~~~----~~~~~ 113 (224)
T 1vd6_A 63 --PVFQVDYADLKAQE---------------------PDLPRLEEVLALKEAFP-Q-AVFNVELKSFPGLG----EEAAR 113 (224)
T ss_dssp --EGGGSCHHHHHHHS---------------------TTCCBHHHHHGGGGTCT-T-CEEEEEECCCTTSH----HHHHH
T ss_pred --ChhhCCHHHHHhcC---------------------CCCCCHHHHHHhhhccC-C-ceEEEEECCCCCcc----HHHHH
Confidence 69999999999875 47999999999998 32 3 48999999764321 13677
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCcc
Q 004721 564 SVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSA 642 (733)
Q Consensus 564 ~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~ 642 (733)
++++++++ . ++|+++||++..|..+++. |++++++++.... ..++..+++ ..+.+.
T Consensus 114 ~v~~~l~~---~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-----------~~~~~~~~~--~~i~~~--- 170 (224)
T 1vd6_A 114 RLAALLRG---R----EGVWVSSFDPLALLALRKAAPGLPLGFLMAEDH-----------SALLPCLGV--EAVHPH--- 170 (224)
T ss_dssp HHHHHTTT---C----SSEEEEESCHHHHHHHHHHCTTSCEEEEESSCC-----------GGGGGGSCC--SEEEEB---
T ss_pred HHHHHHhc---C----CcEEEEeCCHHHHHHHHHHCCCCCEEEEecccc-----------HHHHHHcCC--cEEecC---
Confidence 88888877 3 6999999999999999999 9999999986521 012222322 233332
Q ss_pred ccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHH
Q 004721 643 FITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARY 708 (733)
Q Consensus 643 ~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~ 708 (733)
+...++++++.+|++|++|++||+|++. ++.+++ ++|||||+||+|+.+.++
T Consensus 171 ~~~~~~~~v~~~~~~G~~v~~wtvn~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~ 222 (224)
T 1vd6_A 171 HALVTEEAVAGWRKRGLFVVAWTVNEEG-------------EARRLL-ALGLDGLIGDRPEVLLPL 222 (224)
T ss_dssp GGGCCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HTTCSEEEESCHHHHTTS
T ss_pred cccCCHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-hcCCCEEEcCCHHHHHHh
Confidence 2234689999999999999999999987 899886 999999999999988654
No 28
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=7.3e-43 Score=355.38 Aligned_cols=216 Identities=14% Similarity=0.069 Sum_probs=174.4
Q ss_pred CCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCCC
Q 004721 89 GDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (733)
Q Consensus 89 ~~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~ 168 (733)
..+|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+ .|
T Consensus 5 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d--~iE~DV~lT~Dg~lVv~HD~~l~-----~g--------------- 62 (224)
T 1vd6_A 5 RQRPLRLGHRGAPLKAKENTLESFRLALEAGLD--GVELDVWPTRDGVFAVRHDPDTP-----LG--------------- 62 (224)
T ss_dssp --CCEEEEETSCTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSCSEET-----TE---------------
T ss_pred CCCceEEECCCCCCCCCcchHHHHHHHHHcCCC--EEEEEeeEecCCcEEEECCCccC-----CC---------------
Confidence 356899999999999999999999999999999 99999999999999999999998 22
Q ss_pred CCccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhC---CCceEeeccCchhhhhcCCcHHHHHHHHH
Q 004721 169 TPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK---PPGLWLNIQHDAFYAQHNLSMRSFVLSVS 245 (733)
Q Consensus 169 ~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~---~~~l~iEiK~~~~~~~~~~~~~~~v~~~l 245 (733)
.|.++||+||++|+ ++||||+|+|++++ +..++||+|.+..... .+++.+++++
T Consensus 63 ----~v~~~t~~eL~~l~----------------~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~---~~~~~v~~~l 119 (224)
T 1vd6_A 63 ----PVFQVDYADLKAQE----------------PDLPRLEEVLALKEAFPQAVFNVELKSFPGLGE---EAARRLAALL 119 (224)
T ss_dssp ----EGGGSCHHHHHHHS----------------TTCCBHHHHHGGGGTCTTCEEEEEECCCTTSHH---HHHHHHHHHT
T ss_pred ----ChhhCCHHHHHhcC----------------CCCCCHHHHHHhhhccCCceEEEEECCCCCccH---HHHHHHHHHH
Confidence 69999999999986 38999999999997 3789999996543211 3678889999
Q ss_pred hhcCCceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHhhcccccCCccccccCCCccC
Q 004721 246 RSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLY 325 (733)
Q Consensus 246 ~~~~~~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~~~~~~i~~~~~~~~ 325 (733)
++.+.++++||++..|++++++.| +.++++ +..... .... .. ..+.++++++..+
T Consensus 120 ~~~~~v~i~Sf~~~~l~~~~~~~p--~~~~~~-l~~~~~---------~~~~---~~--~~~~~i~~~~~~~-------- 174 (224)
T 1vd6_A 120 RGREGVWVSSFDPLALLALRKAAP--GLPLGF-LMAEDH---------SALL---PC--LGVEAVHPHHALV-------- 174 (224)
T ss_dssp TTCSSEEEEESCHHHHHHHHHHCT--TSCEEE-EESSCC---------GGGG---GG--SCCSEEEEBGGGC--------
T ss_pred hcCCcEEEEeCCHHHHHHHHHHCC--CCCEEE-Eecccc---------HHHH---HH--cCCcEEecCcccC--------
Confidence 885557999999999999999998 677776 332110 0000 00 1244455443332
Q ss_pred CCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccc
Q 004721 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV 392 (733)
Q Consensus 326 ~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l 392 (733)
++++|+.+|++|++|++||||++ +++++++++| ||||+||+|+.+++++
T Consensus 175 ---~~~~v~~~~~~G~~v~~wtvn~~------------~~~~~l~~~G---vdgI~TD~p~~~~~~~ 223 (224)
T 1vd6_A 175 ---TEEAVAGWRKRGLFVVAWTVNEE------------GEARRLLALG---LDGLIGDRPEVLLPLG 223 (224)
T ss_dssp ---CHHHHHHHHHTTCEEEEECCCCH------------HHHHHHHHTT---CSEEEESCHHHHTTSC
T ss_pred ---CHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHhcC---CCEEEcCCHHHHHHhc
Confidence 47899999999999999999864 8999999999 9999999999877654
No 29
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=6.3e-43 Score=357.86 Aligned_cols=221 Identities=16% Similarity=0.182 Sum_probs=176.2
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCCCC
Q 004721 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (733)
Q Consensus 90 ~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~ 169 (733)
...+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.+
T Consensus 11 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~g---------------- 72 (234)
T 1o1z_A 11 HHVIVLGHRGYSAKYLENTLEAFMKAIEAGAN--GVELDVRLSKDGKVVVSHDEDLKRLFGLDV---------------- 72 (234)
T ss_dssp CCCEEEEETTTTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSEEHHHHCEEE----------------
T ss_pred ceEEEEEcCCCCCCCCCchHHHHHHHHHcCCC--EEEEEeeEecCCCEEEEcCCcHHhcCCcCc----------------
Confidence 46789999999999999999999999999999 999999999999999999999999999876
Q ss_pred CccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhCC-CceEeeccCchhhhhcCCcHHHHHHHHHhhc
Q 004721 170 PGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (733)
Q Consensus 170 ~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~~-~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~ 248 (733)
.|.++||+||++|+ | ++||||+|+|++++. ..++||+|.+ ..++.+++++++.
T Consensus 73 ---~v~d~T~~eL~~l~-------------~--~~iptL~evL~~~~~~~~l~iEiK~~--------~~~~~v~~~l~~~ 126 (234)
T 1o1z_A 73 ---KIRDATVSELKELT-------------D--GKITTLKEVFENVSDDKIINIEIKER--------EAADAVLEISKKR 126 (234)
T ss_dssp ---EGGGSCHHHHHHHT-------------T--TCCCBHHHHHHHSCTTSEEEEEECCG--------GGHHHHHHHHTTC
T ss_pred ---CcccCcHHHHhcCC-------------C--CCCCCHHHHHHhcccCCeEEEEeCCc--------cHHHHHHHHHhcc
Confidence 79999999999997 2 699999999999975 7899999965 2567788888885
Q ss_pred CCceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHH-hhcccccCCccccccCCCccCCC
Q 004721 249 VVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLYLL 327 (733)
Q Consensus 249 ~~~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~i~~~~~~i~~~~~~~~~~ 327 (733)
+.++++||+ +++++++.| +.++++ +...... ..+.... ..+. .+..++++++..+.. .
T Consensus 127 ~~vii~Sf~---l~~~~~~~p--~~~~~~-l~~~~~~-----~~~~~~~---~~~~~~~~~~i~~~~~~~g~-------~ 185 (234)
T 1o1z_A 127 KNLIFSSFD---LDLLDEKFK--GTKYGY-LIDEENY-----GSIENFV---ERVEKERPYSLHVPYQAFEL-------E 185 (234)
T ss_dssp CSEEEEESC---HHHHHHHCT--TSCEEE-ECCTTTT-----CSHHHHH---HHHHHHCCSEEEEEGGGGGS-------H
T ss_pred CCEEEEchh---HHHHHhhCC--CCcEEE-Eeccccc-----cCHHHHH---HHcCCCCCCEEEeCHHHhcC-------C
Confidence 556999999 999999998 677776 3322110 0111111 1111 122566665544300 0
Q ss_pred CChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCcccc
Q 004721 328 PHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (733)
Q Consensus 328 ~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~ 391 (733)
..+++|+.+|++|++|++||||++ ++|++++ ++ ||||+||+|+.++++
T Consensus 186 ~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~---~~-vdgIiTD~P~~~~~~ 233 (234)
T 1o1z_A 186 YAVEVLRSFRKKGIVIFVWTLNDP------------EIYRKIR---RE-IDGVITDEVELFVKL 233 (234)
T ss_dssp HHHHHHHHHHHTTCEEEEESCCCH------------HHHHHHG---GG-CSEEEESCHHHHHHT
T ss_pred ccHHHHHHHHHcCCEEEEeCCCCH------------HHHHHHH---Hh-CCEEEcCCHHHHhhc
Confidence 016799999999999999999874 7899998 45 999999999987665
No 30
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=3.4e-40 Score=343.97 Aligned_cols=251 Identities=15% Similarity=0.100 Sum_probs=186.0
Q ss_pred CCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCccccCccccccccccccccCCC
Q 004721 88 TGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (733)
Q Consensus 88 ~~~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~g~ 167 (733)
.+.+|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|||++.+
T Consensus 14 ~~~~~~iiaHRG~~~~~pENTl~af~~A~~~g~d--~iE~Dv~~TkDg~~vv~HD~~l~r~t~~~g-------------- 77 (278)
T 3i10_A 14 KSNKVLVVAHRGNWRSAPENSTAAIDSAIAMKVD--IVEIDIQKTKDGQLILMHDNTLDRTTTGKG-------------- 77 (278)
T ss_dssp TCCSCEEEEETSCTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSBSTTTBSCCS--------------
T ss_pred CCCCCEEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCeEEEecCcchhhcCCCCc--------------
Confidence 4567999999999999999999999999999999 999999999999999999999999999876
Q ss_pred CCCccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhCC-CceEeeccCchhhhhcCCcHHHHHHHHHh
Q 004721 168 PTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSR 246 (733)
Q Consensus 168 ~~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~~-~~l~iEiK~~~~~~~~~~~~~~~v~~~l~ 246 (733)
.|.++||+||++|+++.++. .+.+ ++||||+|+|++++. +.++||.+ ..+++.++++++
T Consensus 78 -----~v~~~t~~el~~l~~~~~~~----~~~~--~~iptL~evl~~~~~~~~~nie~~---------~~~~~~v~~~l~ 137 (278)
T 3i10_A 78 -----EIKNWTLADIKKLKLKDKDG----KVTN--YVVPTLEEALLTAKGKIMVNLDKA---------YDIFDDVYAILE 137 (278)
T ss_dssp -----BGGGSCHHHHTTSCBBCTTS----CBCS--CCCCBHHHHHHHHTTTSEEEEESC---------GGGHHHHHHHHH
T ss_pred -----eeecCcHHHHhcCCCCCCCc----ccCC--CCCCCHHHHHHHhcCCeEEEEecC---------chHHHHHHHHHH
Confidence 79999999999999997642 3444 899999999999975 45556532 146789999999
Q ss_pred hcCC---ceeccCCHHHHHHHHHhcCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHhhcccccCCccccccCCCc
Q 004721 247 SVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDES 323 (733)
Q Consensus 247 ~~~~---~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~~~~~~i~~~~~~ 323 (733)
++++ ++++|+ ..+++++++.| +.+..++++..-. ...+. ..+.+..++..+.|....+...
T Consensus 138 ~~~~~~~v~i~s~--~~l~~~~~~~p--~~~~~~l~~p~i~--~~~~~-------~~~~i~~~~~~~~p~~~~~~~~--- 201 (278)
T 3i10_A 138 KTETQNQVIMKGG--QPIETVKREFG--SYLDKVLYMPVID--LGNKE-------AEKIITDYLKELRPAAFEIIYS--- 201 (278)
T ss_dssp HHTCGGGEEEEES--SCHHHHHHHHG--GGTTTSEEEEEEE--TTSTT-------HHHHHHHHHHHTCCSEEEEEBC---
T ss_pred HcCCCCeEEEEEh--HHHHHHHHHCc--CCccceEEEeeec--ccccc-------hHHHHHHHHHhcCceEEEEeec---
Confidence 9987 378883 45889999888 5666653321100 00000 1233444444444432111111
Q ss_pred cCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCC----C-ChHHHHHHHHhc-CCcccceEEecCCCCccccchhc
Q 004721 324 LYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYS----Y-DPLTEYLSFIDN-GDFSVDGVLSDFPLTPSAAVDCF 395 (733)
Q Consensus 324 ~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~----~-d~~~~~~~l~~~-G~~~VDgIiTD~P~~~~~~l~~~ 395 (733)
......+++|+.+|++|++|++||+.++- ...+. + |+...|.+++++ | ||+|+||+|+.+.++++..
T Consensus 202 ~~~~~~~~~v~~~~~~g~~v~~nTlw~~~--~~g~~d~~a~~d~~~~~~~l~~~~G---vd~I~TD~P~~l~~yL~~~ 274 (278)
T 3i10_A 202 DPKNPLPPKIKQLLFKKSLIWYNTLWGSL--AGNHDDNLALTDPEKSYGYLIEQLG---ARILQTDQPAYLLDYLRKK 274 (278)
T ss_dssp CTTCSSHHHHHHHHTTTSEEEEECSSGGG--BTTCCHHHHHHCHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHCCCEEEEEeccccc--ccCccchhhccChHHHHHHHHhcCC---CCEEEeCCHHHHHHHHhhc
Confidence 11123478999999999999999974320 00000 1 455679999999 9 9999999999998888653
No 31
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=100.00 E-value=3.7e-34 Score=302.08 Aligned_cols=233 Identities=11% Similarity=0.107 Sum_probs=168.0
Q ss_pred Ccc-eEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccc---cccccccCCCcCCCccccccccc
Q 004721 406 ANL-LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFIN---LINSTNAAQSKFNSITTTIPEIM 481 (733)
Q Consensus 406 ~~~-~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~---L~rtt~v~~~~~~~r~~~~~~~~ 481 (733)
.+| +||||| |||++||++|++.|||+||+|||+ |||++||+||.+ |+|+||
T Consensus 4 ~~p~~iiaHr-------ENTl~Af~~A~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~----------------- 58 (285)
T 1xx1_A 4 RRPIWNLAHM-------VNAVAQIPDFLDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCI----------------- 58 (285)
T ss_dssp SEEEEEEESC-------CCSTTHHHHHHHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSC-----------------
T ss_pred CCCcEEEEeh-------hccHHHHHHHHHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccC-----------------
Confidence 456 899999 999999999999999999999999 999999999999 999999
Q ss_pred ccCcccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHhh---cC
Q 004721 482 AGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEK---QG 558 (733)
Q Consensus 482 ~~~g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~---~~ 558 (733)
++| .|.++ ++||++|++ ++ ++.|. +.|+ .++||||.+....+. .+
T Consensus 59 -~~g-~v~d~-l~eL~~l~~--~~---------~~~~~---------~~L~---------~l~iEiK~~~~~~~~~~~~~ 106 (285)
T 1xx1_A 59 -RWE-YFNVF-LKTLREYTT--PG---------NAKYR---------DGFI---------LFVLDLKTGSLSNDQVRPAG 106 (285)
T ss_dssp -CEE-EHHHH-HHHHHHHTS--TT---------CTTCC---------TTCC---------EEEEEECCTTCCHHHHHHHH
T ss_pred -CCc-cHHHH-HHHHHHccc--CC---------CCccc---------cccc---------EEEEecCCCcccccccchhh
Confidence 777 79999 999999997 21 12232 2221 599999976532110 00
Q ss_pred CcHHHHHHHHHHHcCCCCCCCce----EEEEeCCHHHHHH-HHhc--------cCceEEEEeecccchhhhHHHHHHHHH
Q 004721 559 MSVTNSVMEALGNAGYNKQTALK----VMIQSTDSSVLMK-LREK--------TSYELVYKVKENIRDALNQTIEDIKKF 625 (733)
Q Consensus 559 ~~~~~~v~~~l~~~~~~~~~~~~----vii~Sfd~~~L~~-lk~~--------p~~~~~~l~~~~~~~~~~~~l~~i~~~ 625 (733)
..+++ .+++++++.....++ |+++||++..|.+ ++++ |.+++++++...... +...+..+..+
T Consensus 107 ~~~~~---~ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~-~~~~~~~~~~~ 182 (285)
T 1xx1_A 107 ENVAK---ELLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYLP-SLPTLDATHEA 182 (285)
T ss_dssp HHHHH---HHHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGGGGGEEEEECCCCSS-SCCCHHHHHHH
T ss_pred hhHHH---HHHHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccCcccceEEeccccccc-chhhHHHHHHH
Confidence 01222 256777653111135 9999999999999 9875 889999998653100 00112334445
Q ss_pred HhHhcCCCcccccCC--------ccccccchHHHHHHHHCCC--cEEEEecCCcccccccccCCChHHHHHHHHhhcCcC
Q 004721 626 ADSVVLSKESVYPLN--------SAFITSATDIVQRLQSFKL--PVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGID 695 (733)
Q Consensus 626 a~~i~~~~~~i~~~~--------~~~l~~~~~~v~~~~~~Gl--~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVd 695 (733)
+..+++.. ..+... ..+...++.+++.+|++|+ +|++||||++. ++.+++ ++|||
T Consensus 183 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~~-------------~~~~l~-~~GVD 247 (285)
T 1xx1_A 183 YKKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKVS-------------TTKAAL-DVGVD 247 (285)
T ss_dssp HHHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSHH-------------HHHHHH-HHTCS
T ss_pred HHHhCCCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCHH-------------HHHHHH-hcCCC
Confidence 55554422 111100 0022346789999999999 99999999997 899997 99999
Q ss_pred EEEeCChHHHHHHHHhhcc
Q 004721 696 GVITEFPMTAARYRSKLVR 714 (733)
Q Consensus 696 gIiTD~P~~~~~~l~~~~~ 714 (733)
|||||+|+.+.+++++...
T Consensus 248 gIiTD~P~~~~~~l~~~~~ 266 (285)
T 1xx1_A 248 GIMTNYPNVLIGVLKESGY 266 (285)
T ss_dssp EEEESCHHHHHHHHHSTTT
T ss_pred EEEeCCHHHHHHHHhhhcc
Confidence 9999999999999987643
No 32
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=100.00 E-value=1.5e-34 Score=305.04 Aligned_cols=232 Identities=11% Similarity=0.004 Sum_probs=156.7
Q ss_pred CCC-EEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCC---CccccCccccccccccccccC
Q 004721 90 DPP-FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLK---LDNASNIAQIFKTQQKNYLVN 165 (733)
Q Consensus 90 ~~~-~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~---l~rtt~~~~~~~~~~~~~~~~ 165 (733)
++| +||||| |||++||+.|++.||| +||+|||+ |||++||+||.+ |+|||++.+
T Consensus 4 ~~p~~iiaHr-------ENTl~Af~~A~~~Gad--~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~~g------------ 61 (285)
T 1xx1_A 4 RRPIWNLAHM-------VNAVAQIPDFLDLGAN--ALEADVTF-KGSVPTYTYHGTPCDFGRDCIRWE------------ 61 (285)
T ss_dssp SEEEEEEESC-------CCSTTHHHHHHHHTCS--EEEEEEEE-ETTEEEEEECCSSCCTTSCSCCEE------------
T ss_pred CCCcEEEEeh-------hccHHHHHHHHHhCCC--EEEEEEEE-ECCEEEEEcCCcccccccccCCCc------------
Confidence 455 899999 9999999999999999 99999999 999999999999 999999876
Q ss_pred CCCCCccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhCCCceEeeccCchhhhhc----CCcHHHHH
Q 004721 166 GVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQH----NLSMRSFV 241 (733)
Q Consensus 166 g~~~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~~~~l~iEiK~~~~~~~~----~~~~~~~v 241 (733)
.|.++ |+||++|++ ++ . |++++.|+ .++||||.+...... +..+++.+
T Consensus 62 -------~v~d~-l~eL~~l~~--~~---~----------~~~~~~L~-----~l~iEiK~~~~~~~~~~~~~~~~~~~l 113 (285)
T 1xx1_A 62 -------YFNVF-LKTLREYTT--PG---N----------AKYRDGFI-----LFVLDLKTGSLSNDQVRPAGENVAKEL 113 (285)
T ss_dssp -------EHHHH-HHHHHHHTS--TT---C----------TTCCTTCC-----EEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred -------cHHHH-HHHHHHccc--CC---C----------Cccccccc-----EEEEecCCCcccccccchhhhhHHHHH
Confidence 79999 999999998 21 2 23333332 799999976432110 11133333
Q ss_pred HHHHhhc----CC----ceeccCCHHHHHH-HHHh-------cCCCcccchhhhcCCCccCCCCCcchhHHHhhHHHHHh
Q 004721 242 LSVSRSV----VV----NYISSPEVNFLRS-IAAR-------FRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT 305 (733)
Q Consensus 242 ~~~l~~~----~~----~~i~SF~~~~l~~-l~~~-------~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 305 (733)
++..... .. ++|+||++..|++ ++++ .| ..+++++ ...... + +........ ..+..
T Consensus 114 l~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p--~~~~~~l-~~~~~~-~-~~~~~~~~~---~~~~~ 185 (285)
T 1xx1_A 114 LQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDL--LEKVGYD-FSGPYL-P-SLPTLDATH---EAYKK 185 (285)
T ss_dssp HHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGG--GGGEEEE-ECCCCS-S-SCCCHHHHH---HHHHH
T ss_pred HHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccCc--ccceEEe-cccccc-c-chhhHHHHH---HHHHH
Confidence 3333322 23 6899999999999 9999 77 6777763 322100 0 001111111 11111
Q ss_pred -hcccccCCccccccCC--CccCCCCChHHHHHHHHcCC--eEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceE
Q 004721 306 -FASGILVPKDYIWPVD--ESLYLLPHTTIVLDAHKERL--EVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGV 380 (733)
Q Consensus 306 -~a~~i~~~~~~i~~~~--~~~~~~~~~~~v~~ah~~Gl--~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgI 380 (733)
.+.+ +++........ ..++...++.+++.+|++|+ +|++||||++ ++|++++++| ||||
T Consensus 186 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~------------~~~~~l~~~G---VDgI 249 (285)
T 1xx1_A 186 AGVDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKV------------STTKAALDVG---VDGI 249 (285)
T ss_dssp HTCCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSH------------HHHHHHHHHT---CSEE
T ss_pred hCCCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCH------------HHHHHHHhcC---CCEE
Confidence 1121 22111000000 00011124678999999999 9999999875 8999999999 9999
Q ss_pred EecCCCCccccchhc
Q 004721 381 LSDFPLTPSAAVDCF 395 (733)
Q Consensus 381 iTD~P~~~~~~l~~~ 395 (733)
|||+|+.++++++..
T Consensus 250 iTD~P~~~~~~l~~~ 264 (285)
T 1xx1_A 250 MTNYPNVLIGVLKES 264 (285)
T ss_dssp EESCHHHHHHHHHST
T ss_pred EeCCHHHHHHHHhhh
Confidence 999999988877653
No 33
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.87 E-value=6.1e-22 Score=202.45 Aligned_cols=231 Identities=12% Similarity=0.117 Sum_probs=143.8
Q ss_pred CcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeecccc---ccccccCCCcCCCcccccccccc
Q 004721 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL---INSTNAAQSKFNSITTTIPEIMA 482 (733)
Q Consensus 406 ~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L---~rtt~v~~~~~~~r~~~~~~~~~ 482 (733)
+++.+|||| |||++||+.|++.||++||+||++|+||+||++||... .|.|+.
T Consensus 27 rp~~~i~H~-------vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~----------------- 82 (302)
T 3rlg_A 27 RPIWIMGAM-------VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKK----------------- 82 (302)
T ss_dssp EEEEEEESC-------CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCC-----------------
T ss_pred CceEEEeeh-------hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCC-----------------
Confidence 345899997 99999999999999999999999999999999999854 444431
Q ss_pred cCcccccccCHHHHhccCccccCCCccccccCCcCCCCCccccCHHHHHHHHHhcCCCceEEEEecchhHHHh---hcCC
Q 004721 483 GSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAE---KQGM 559 (733)
Q Consensus 483 ~~g~~i~d~T~~EL~~L~~~~~~~~~~~~~~~~~~~~g~~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~---~~~~ 559 (733)
+..+.+ .+++|+++..- .++.|.. +.+-+++++|.+....+ ..|.
T Consensus 83 --~~~~~~-~l~~lr~~ttp-----------g~~k~~~------------------~l~lv~~DlK~~~l~~~~~~~aG~ 130 (302)
T 3rlg_A 83 --YENFND-FLKGLRSATTP-----------GNSKYQE------------------KLVLVVFDLKTGSLYDNQANDAGK 130 (302)
T ss_dssp --CCBHHH-HHHHHHHHHST-----------TSTTCCT------------------TCCEEEEEECGGGSCGGGHHHHHH
T ss_pred --CccHHH-HHHHHHHhcCC-----------CCCcccc------------------ceEEEEEEcCCCCCCHHHHHHhHH
Confidence 113444 55666554321 0112221 12468999996543221 2355
Q ss_pred cHHHHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc------cC-----ceEEEEeecccchhhhHHHHHHHHHHhH
Q 004721 560 SVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK------TS-----YELVYKVKENIRDALNQTIEDIKKFADS 628 (733)
Q Consensus 560 ~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~------p~-----~~~~~l~~~~~~~~~~~~l~~i~~~a~~ 628 (733)
++++++++.+-+.|....+ -.|+||+|+.+.++.++.. .. -++++=+... ..++.+.+....
T Consensus 131 ~la~kLl~~~w~~g~~~~r-a~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n------~dl~~i~~~~~~ 203 (302)
T 3rlg_A 131 KLAKNLLQHYWNNGNNGGR-AYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGN------DDIGDVGKAYKK 203 (302)
T ss_dssp HHHHHHHHHTSGGGSSCCC-CEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSC------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCce-eEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCC------CCHHHHHHHHHh
Confidence 6777887777765544332 4899999998766555432 11 1233333221 113344333333
Q ss_pred hcCCCcccccCC--ccccccchHHHHHHHH-----CC--CcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEe
Q 004721 629 VVLSKESVYPLN--SAFITSATDIVQRLQS-----FK--LPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVIT 699 (733)
Q Consensus 629 i~~~~~~i~~~~--~~~l~~~~~~v~~~~~-----~G--l~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiT 699 (733)
.++.. .++..+ .+.+......++.+.+ .| ++|++||||++. ++.+++ ++|||||||
T Consensus 204 ~Gi~~-h~wqsDGItnC~~r~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~~-------------~m~~l~-~~GVDGIIT 268 (302)
T 3rlg_A 204 AGITG-HIWQSDGITNCLPRGLSRVNAAVANRDSANGFINKVYYWTVDKRS-------------TTRDAL-DAGVDGIMT 268 (302)
T ss_dssp TTCCS-CBEEEEECCTTSCCCSHHHHHHHHHHTSTTCCCSEEEEECCCSHH-------------HHHHHH-HTTCSEEEE
T ss_pred cCCcC-cEEecCCcccceeccHHHHHHHHHhccCCCCceEEEEEEeCCCHH-------------HHHHHH-HcCCCEEEC
Confidence 33211 111110 0111112222332222 23 789999999997 899997 999999999
Q ss_pred CChHHHHHHHHhhcc
Q 004721 700 EFPMTAARYRSKLVR 714 (733)
Q Consensus 700 D~P~~~~~~l~~~~~ 714 (733)
|+|+.+.+++++++-
T Consensus 269 D~Pd~l~~~l~~~~~ 283 (302)
T 3rlg_A 269 NYPDVITDVLNEAAY 283 (302)
T ss_dssp SCHHHHHHHHTSHHH
T ss_pred CCHHHHHHHHHhcCc
Confidence 999999999986643
No 34
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.86 E-value=1.7e-22 Score=206.62 Aligned_cols=229 Identities=13% Similarity=0.050 Sum_probs=139.0
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCCc---cccCccccccccccccccCC
Q 004721 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD---NASNIAQIFKTQQKNYLVNG 166 (733)
Q Consensus 90 ~~~~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l~---rtt~~~~~~~~~~~~~~~~g 166 (733)
+|..||||| |||++||+.|+++||+ +||+||++|+||++|++||...- |.+....
T Consensus 27 rp~~~i~H~-------vNTl~~~~~a~~~GAn--~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~------------- 84 (302)
T 3rlg_A 27 RPIWIMGAM-------VNAIGQIDEFVNLGAN--SIETDVSFDDNANPEYTYHGIPCDCGRNCKKYE------------- 84 (302)
T ss_dssp EEEEEEESC-------CCSHHHHHHHHHTTCS--EEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCC-------------
T ss_pred CceEEEeeh-------hhhHHHHHHHHHcCCC--EEEEEEEECCCCCEEEEECCCCcchhccCCCCc-------------
Confidence 344799997 9999999999999999 99999999999999999998553 3222111
Q ss_pred CCCCccccccCCHHhhccccccccccCCCCCCCCCCcccccHHHHHHhhCCCceEeeccCchhhhh----cCCcHHHHHH
Q 004721 167 VPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQ----HNLSMRSFVL 242 (733)
Q Consensus 167 ~~~~g~~v~d~T~~eL~~l~~~~~~~~~~~~~~g~~~~iptL~e~l~~~~~~~l~iEiK~~~~~~~----~~~~~~~~v~ 242 (733)
.+.+ .+++|+++.-- ..+.|.. + =+-+++++|.+..... .|.++++.++
T Consensus 85 ------~~~~-~l~~lr~~ttp-----g~~k~~~---~------------l~lv~~DlK~~~l~~~~~~~aG~~la~kLl 137 (302)
T 3rlg_A 85 ------NFND-FLKGLRSATTP-----GNSKYQE---K------------LVLVVFDLKTGSLYDNQANDAGKKLAKNLL 137 (302)
T ss_dssp ------BHHH-HHHHHHHHHST-----TSTTCCT---T------------CCEEEEEECGGGSCGGGHHHHHHHHHHHHH
T ss_pred ------cHHH-HHHHHHHhcCC-----CCCcccc---c------------eEEEEEEcCCCCCCHHHHHHhHHHHHHHHH
Confidence 2333 55555554320 0111111 0 0347889996654432 2567778777
Q ss_pred HHHhhcCC------ceeccCCHHHHHHHHHhcCCC-cccchhhhcCCCccCCCCCcchh---HHHh--hHHHHHhhcccc
Q 004721 243 SVSRSVVV------NYISSPEVNFLRSIAARFRPS-MTKLVFRFLGKSEIEPTTNQTYG---SLLK--NLTFIKTFASGI 310 (733)
Q Consensus 243 ~~l~~~~~------~~i~SF~~~~l~~l~~~~p~~-~~~~~~~l~~~~~~~~~~~~~~~---~~~~--~l~~~~~~a~~i 310 (733)
+.+-..|. +++|+|+...++.++...... +.+... +++.-.+.-..+.... .+.. ++....-+++||
T Consensus 138 ~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~-LldkvG~Dfs~n~dl~~i~~~~~~~Gi~~h~wqsDGI 216 (302)
T 3rlg_A 138 QHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPE-LMDKVGHDFSGNDDIGDVGKAYKKAGITGHIWQSDGI 216 (302)
T ss_dssp HHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGG-GGGGEEEEECSCCCHHHHHHHHHHTTCCSCBEEEEEC
T ss_pred HHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHH-HhhhcCccccCCCCHHHHHHHHHhcCCcCcEEecCCc
Confidence 77766432 489999987666555432000 112211 2221111111111122 2221 222222346666
Q ss_pred cCCccccccCCCccCCCCChHHHHHHHHc-----C--CeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEec
Q 004721 311 LVPKDYIWPVDESLYLLPHTTIVLDAHKE-----R--LEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD 383 (733)
Q Consensus 311 ~~~~~~i~~~~~~~~~~~~~~~v~~ah~~-----G--l~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD 383 (733)
+++. +. +...++.+.+. | ++|++||||++ ++|++++++| |||||||
T Consensus 217 tnC~--~r----------~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~------------~~m~~l~~~G---VDGIITD 269 (302)
T 3rlg_A 217 TNCL--PR----------GLSRVNAAVANRDSANGFINKVYYWTVDKR------------STTRDALDAG---VDGIMTN 269 (302)
T ss_dssp CTTS--CC----------CSHHHHHHHHHHTSTTCCCSEEEEECCCSH------------HHHHHHHHTT---CSEEEES
T ss_pred ccce--ec----------cHHHHHHHHHhccCCCCceEEEEEEeCCCH------------HHHHHHHHcC---CCEEECC
Confidence 6654 11 12234433333 3 79999999875 8999999999 9999999
Q ss_pred CCCCccccchhc
Q 004721 384 FPLTPSAAVDCF 395 (733)
Q Consensus 384 ~P~~~~~~l~~~ 395 (733)
+|+.++++++..
T Consensus 270 ~Pd~l~~~l~~~ 281 (302)
T 3rlg_A 270 YPDVITDVLNEA 281 (302)
T ss_dssp CHHHHHHHHTSH
T ss_pred CHHHHHHHHHhc
Confidence 999998888654
No 35
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=91.61 E-value=0.087 Score=60.57 Aligned_cols=50 Identities=14% Similarity=0.105 Sum_probs=42.7
Q ss_pred EecCCC---CCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccc
Q 004721 411 ISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (733)
Q Consensus 411 IaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~ 460 (733)
-+|.-+ ....-+.|.++|.+|+..||+.||+|+|=-.||.|||+|-.||-
T Consensus 177 SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tlt 229 (624)
T 1djx_A 177 SSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFT 229 (624)
T ss_dssp EESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSCC
T ss_pred cccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCccc
Confidence 456542 34567899999999999999999999999999999999998773
No 36
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=90.63 E-value=0.13 Score=60.89 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=43.7
Q ss_pred eEEecCCC---CCCCCCchHHHHHHHHHCCCCeeecCceeec--CCeEEEeeccccc
Q 004721 409 LVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSK--DGVPFCLSFINLI 460 (733)
Q Consensus 409 ~iIaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTk--Dgv~Vv~HD~~L~ 460 (733)
+--+|.-+ ....-+-|.++|.+|+..||+.||+|++=-. ||.|||+|-.||-
T Consensus 323 I~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tlt 379 (799)
T 2zkm_X 323 INSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMT 379 (799)
T ss_dssp ECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSC
T ss_pred EeccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCccc
Confidence 44566553 3456789999999999999999999999987 9999999998863
No 37
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=89.58 E-value=0.16 Score=59.75 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=43.8
Q ss_pred eEEecCCC---CCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeeccccc
Q 004721 409 LVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (733)
Q Consensus 409 ~iIaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~~L~ 460 (733)
+--+|.-+ ....-+-|.++|.+|+..||+.||+|++=-.||.|||+|-.||-
T Consensus 334 I~sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tlt 388 (816)
T 3qr0_A 334 INSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTMC 388 (816)
T ss_dssp ECBBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSSC
T ss_pred ecccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCccc
Confidence 34566553 34567899999999999999999999999999999999998864
No 38
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=89.57 E-value=0.22 Score=57.26 Aligned_cols=49 Identities=16% Similarity=0.143 Sum_probs=42.6
Q ss_pred EEeCCC---CCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCC
Q 004721 95 VARGGF---SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (733)
Q Consensus 95 iaHRG~---~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l 145 (733)
.+|--+ ....-+-|.++|..|+..||. .||+|+|=-.||.|||+|-.||
T Consensus 177 SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~ep~v~HG~tl 228 (624)
T 1djx_A 177 SSHNTYLLEDQLTGPSSTEAYIRALCKGCR--CLELDCWDGPNQEPIIYHGYTF 228 (624)
T ss_dssp EESSTTBSSCSSSCCBCHHHHHHHHHTTCC--EEEEEEECCGGGCCEECCTTSC
T ss_pred cccchhhhcCcccCCcCHHHHHHHHHhCCc--EEEEEeecCCCCCeEEecCCcc
Confidence 466543 345678999999999999999 9999999999999999999988
No 39
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=88.74 E-value=6.6 Score=37.59 Aligned_cols=141 Identities=15% Similarity=0.207 Sum_probs=94.5
Q ss_pred ccccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHHHHHHHHc-CCCCCCCceEEEEeCCHHHHHHHHhc--
Q 004721 522 GKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNA-GYNKQTALKVMIQSTDSSVLMKLREK-- 598 (733)
Q Consensus 522 ~~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~-~~~~~~~~~vii~Sfd~~~L~~lk~~-- 598 (733)
..|.+|+++.+.+++..+ .+++.+.... |..-.+.-++.|.+. +.+ -+.|-....++..|+.
T Consensus 38 g~i~~l~~~v~~lk~~~K--~v~Vh~Dli~------Gls~d~~ai~fL~~~~~pd-------GIIsTk~~~i~~Ak~~gL 102 (192)
T 3kts_A 38 THVAQLKALVKYAQAGGK--KVLLHADLVN------GLKNDDYAIDFLCTEICPD-------GIISTRGNAIMKAKQHKM 102 (192)
T ss_dssp EETTTHHHHHHHHHHTTC--EEEEEGGGEE------TCCCSHHHHHHHHHTTCCS-------EEEESCHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHcCC--eEEEecCchh------ccCCcHHHHHHHHhCCCCC-------EEEeCcHHHHHHHHHCCC
Confidence 578999999999999855 4666666322 111123345666653 333 6778899999999988
Q ss_pred cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCccccccchHHHHHHHH-CCCcEEEEec-CCcccccccc
Q 004721 599 TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFITSATDIVQRLQS-FKLPVYVETF-SNEFVSQAWD 676 (733)
Q Consensus 599 p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~~l~~~~~~v~~~~~-~Gl~v~~wTv-n~~~~~~~~~ 676 (733)
.-++.+|+++.. +++...+......|..-.+.|. ..+++++++++ -+.++.+-+. ++++
T Consensus 103 ~tIqR~FliDS~-------al~~~~~~i~~~~PD~iEiLPG------i~p~iI~~i~~~~~~PiIaGGlI~~~e------ 163 (192)
T 3kts_A 103 LAIQRLFMIDSS-------AYNKGVALIQKVQPDCIELLPG------IIPEQVQKMTQKLHIPVIAGGLIETSE------ 163 (192)
T ss_dssp EEEEEEECCSHH-------HHHHHHHHHHHHCCSEEEEECT------TCHHHHHHHHHHHCCCEEEESSCCSHH------
T ss_pred eEEEEEEEEEcc-------hHHHHHHHHhhcCCCEEEECCc------hhHHHHHHHHHhcCCCEEEECCcCCHH------
Confidence 678888887642 2333333444455544344443 13678887765 6888888864 5554
Q ss_pred cCCChHHHHHHHHhhcCcCEEEeCChHH
Q 004721 677 FFSDPTVEINTYYEGAGIDGVITEFPMT 704 (733)
Q Consensus 677 ~~~d~~~e~~~~l~~~GVdgIiTD~P~~ 704 (733)
++...+ +.|+++|.|=.+..
T Consensus 164 -------dv~~al-~aGA~aVsTs~~~L 183 (192)
T 3kts_A 164 -------QVNQVI-ASGAIAVTTSNKHL 183 (192)
T ss_dssp -------HHHHHH-TTTEEEEEECCGGG
T ss_pred -------HHHHHH-HcCCeEEEeCCHHH
Confidence 788887 99999999987754
No 40
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=88.21 E-value=0.31 Score=57.49 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=42.1
Q ss_pred EEeCCC---CCCCCccHHHHHHHHHHcCCCCcEEEeeeeecC--CCeEEEecCCCC
Q 004721 95 VARGGF---SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKL 145 (733)
Q Consensus 95 iaHRG~---~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTk--Dg~lVv~HD~~l 145 (733)
.+|--+ ....-+-|.++|..|+..||. .||+|+|=-. ||.+||+|-.||
T Consensus 325 SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcR--cvElD~Wdg~~~~~ep~v~HG~Tl 378 (799)
T 2zkm_X 325 SSHNTYLTAGQFSGLSSAEMYRQVLLSGCR--CVELDCWKGKPPDEEPIITHGFTM 378 (799)
T ss_dssp BBSSTTBSSCSSSSCBCTHHHHHHHHTTCC--EEEEEEECCCTTCCSCEECCTTSS
T ss_pred ccccceeecCcccCcccHHHHHHHHHhCCC--EEEEEeecCCCCCCCCEEEeCCcc
Confidence 456542 345678999999999999999 9999999988 999999999987
No 41
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=87.33 E-value=0.37 Score=56.81 Aligned_cols=50 Identities=20% Similarity=0.139 Sum_probs=42.8
Q ss_pred EEEeCCC---CCCCCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEecCCCC
Q 004721 94 VVARGGF---SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (733)
Q Consensus 94 viaHRG~---~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~HD~~l 145 (733)
-.+|.-+ ....-+-|.++|..|+..||. .||+|+|=-.||++||+|-.||
T Consensus 335 ~sshntyL~g~ql~g~ss~~~y~~aL~~gcR--cvEld~wdg~~~ePvv~HG~Tl 387 (816)
T 3qr0_A 335 NSSHNTYLTGHQLTGKSSVEIYRQVLLTGCR--CLELDCWDGKDGEPIITHGFTM 387 (816)
T ss_dssp CBBSSTTBSSCTTTSCBCSHHHHHHHHTTCC--EEEEEEECCTTSSCEECCTTSS
T ss_pred cccccchhccccccCcccHHHHHHHHHhCCc--EEEEEEecCCCCCceEccCCcc
Confidence 3456542 345678899999999999999 9999999999999999999987
No 42
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=85.57 E-value=0.33 Score=57.62 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=42.2
Q ss_pred eEEecCCC---CCCCCCchHHHHHHHHHCCCCeeecCceee--cCCeEEEeeccccc
Q 004721 409 LVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMS--KDGVPFCLSFINLI 460 (733)
Q Consensus 409 ~iIaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lT--kDgv~Vv~HD~~L~ 460 (733)
+--+|.-+ ....-+-|.++|.+|+..||+.||+|++=- .||.|||+|-.+|-
T Consensus 327 I~ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~t 383 (885)
T 3ohm_B 327 INSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMT 383 (885)
T ss_dssp ECCBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSEE
T ss_pred eeccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCccc
Confidence 34456553 234567899999999999999999999965 78999999998873
No 43
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=83.86 E-value=11 Score=35.87 Aligned_cols=139 Identities=12% Similarity=0.139 Sum_probs=89.6
Q ss_pred cccCHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhc--cC
Q 004721 523 KFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK--TS 600 (733)
Q Consensus 523 ~IptLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~--p~ 600 (733)
.+..|+++.+.+++. +. .+++.+..-. |..-.+.-++.|+..+.. -+.|-....+...|+. ..
T Consensus 41 ~I~~L~~iv~~ik~~-gK-~vivh~DlI~------GLs~d~~ai~fL~~~~pd-------GIIsTk~~~i~~Akk~GL~t 105 (188)
T 1vkf_A 41 DILNLKFHLKILKDR-GK-TVFVDMDFVN------GLGEGEEAILFVKKAGAD-------GIITIKPKNYVVAKKNGIPA 105 (188)
T ss_dssp ETTTHHHHHHHHHHT-TC-EEEEEGGGEE------TCCSSHHHHHHHHHHTCS-------EEEESCHHHHHHHHHTTCCE
T ss_pred cHHHHHHHHHHHHHC-CC-eEEEecCccc------ccCCCHHHHHHHHhcCCC-------EEEcCcHHHHHHHHHcCCEE
Confidence 567899999999988 43 6778777332 111112234555555544 6778889999999987 67
Q ss_pred ceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCccccccchHHHHHHHHCCCcEEEEec-CCcccccccccCC
Q 004721 601 YELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFITSATDIVQRLQSFKLPVYVETF-SNEFVSQAWDFFS 679 (733)
Q Consensus 601 ~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~~l~~~~~~v~~~~~~Gl~v~~wTv-n~~~~~~~~~~~~ 679 (733)
++.+|++++. +++...+......|..-.+.|. ...+++++.+ .+.++.+-+. ++++
T Consensus 106 IqR~FliDs~-------al~~~~~~I~~~kPD~iEiLPg-----~v~p~~I~~v--~~~PiIaGGlI~t~e--------- 162 (188)
T 1vkf_A 106 VLRFFALDSK-------AVERGIEQIETLGVDVVEVLPG-----AVAPKVARKI--PGRTVIAAGLVETEE--------- 162 (188)
T ss_dssp EEEEECCSHH-------HHHHHHHHHHHHTCSEEEEESG-----GGHHHHHTTS--TTSEEEEESCCCSHH---------
T ss_pred eeEEEEEEeH-------HHhhhhhhccccCCCeEeecCC-----CchHHHHHHh--cCCCEEEECCcCCHH---------
Confidence 8888888651 1222222223334433333332 1136788877 6778888754 5554
Q ss_pred ChHHHHHHHHhhcCcCEEEeCChHHH
Q 004721 680 DPTVEINTYYEGAGIDGVITEFPMTA 705 (733)
Q Consensus 680 d~~~e~~~~l~~~GVdgIiTD~P~~~ 705 (733)
++.+ + +.|+++|.|=.++..
T Consensus 163 ----dv~~-l-~aGA~aIsTs~~~LW 182 (188)
T 1vkf_A 163 ----EARE-I-LKHVSAISTSSRILW 182 (188)
T ss_dssp ----HHHH-H-TTTSSEEEECCHHHH
T ss_pred ----HHHH-H-HCCCeEEEeCCHHHh
Confidence 7777 7 999999999888753
No 44
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=83.01 E-value=1.3 Score=45.74 Aligned_cols=49 Identities=10% Similarity=-0.044 Sum_probs=36.4
Q ss_pred ceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeec-CCeEEEeeccccc
Q 004721 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSK-DGVPFCLSFINLI 460 (733)
Q Consensus 408 ~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTk-Dgv~Vv~HD~~L~ 460 (733)
.++-+|--+.... ...+.+|++.|+.+||+||+... .|.+-|+|...+.
T Consensus 32 T~~g~HNSY~~g~----~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~ 81 (339)
T 3h4x_A 32 TSVGVHNAYEKEK----YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLG 81 (339)
T ss_dssp EEEEETTTTCTTT----CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSS
T ss_pred eEeeccccccccC----cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccc
Confidence 4566776543211 35788999999999999999874 5579999987654
No 45
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=81.29 E-value=0.76 Score=54.54 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=40.7
Q ss_pred EEeCCC---CCCCCccHHHHHHHHHHcCCCCcEEEeeeeec--CCCeEEEecCCCC
Q 004721 95 VARGGF---SGIFPDSSSIAYSLTLITSAPSVILWCDVQLT--KDEAGICFPDLKL 145 (733)
Q Consensus 95 iaHRG~---~~~~pENTl~af~~A~~~g~d~~~iE~DV~lT--kDg~lVv~HD~~l 145 (733)
.+|.-+ ....-+-|.++|..|+..||. .||+|+|=- .||++||+|-.||
T Consensus 329 ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcR--cvEld~wdg~~~~~ep~v~hg~t~ 382 (885)
T 3ohm_B 329 SSHNTYLTAGQLAGTSSVEMYRQALLWGCR--CVELDVWKGRPPEEEPFITHGFTM 382 (885)
T ss_dssp CBSSTTBSSCSSEECBCSHHHHHHHHTTCC--EEEEEEECCCSSSCCCEECSTTSE
T ss_pred ccccceeccccccCcCcHHHHHHHHHhCCC--EEEEEeeCCCCCCCCCEEeeCCcc
Confidence 455543 234567899999999999999 999999966 7899999999987
No 46
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=79.44 E-value=20 Score=36.25 Aligned_cols=139 Identities=9% Similarity=0.007 Sum_probs=73.0
Q ss_pred ccHHHHHHhhCCCceEeeccCchhhhhc--CCcHHHHHHHHHhhcCCceecc------C--CHHHHHHHHHhcCCCcccc
Q 004721 206 LTVQDMARQIKPPGLWLNIQHDAFYAQH--NLSMRSFVLSVSRSVVVNYISS------P--EVNFLRSIAARFRPSMTKL 275 (733)
Q Consensus 206 ptL~e~l~~~~~~~l~iEiK~~~~~~~~--~~~~~~~v~~~l~~~~~~~i~S------F--~~~~l~~l~~~~p~~~~~~ 275 (733)
..|.++|.. ....++-|+|..+..... ...-...+.+...+.|...|+- | +.+.++.+++.. +.|+
T Consensus 41 ~~f~~al~~-~~~~~IaE~K~asPs~g~i~~~~~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v---~lPv 116 (272)
T 3qja_A 41 LDVMAALRE-PGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV---SIPV 116 (272)
T ss_dssp CCHHHHHTS-SSCEEEEEEC-------------CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC---SSCE
T ss_pred CCHHHHHhc-CCCeEEEEEecCCCCCCccCCCCCHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC---CCCE
Confidence 357777753 347889999943322110 0011234455666667654432 2 346777777764 3555
Q ss_pred hhhhcCCCccCCCCCcchhHHHhhHHHH-HhhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCc
Q 004721 276 VFRFLGKSEIEPTTNQTYGSLLKNLTFI-KTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPI 354 (733)
Q Consensus 276 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~ 354 (733)
.. . +... + .| .++.. ...++++......+-+. .-.++++.+|+.|+.+.+-+ .+
T Consensus 117 l~--k--dfii--d--~~-----qv~~A~~~GAD~VlLi~a~l~~~-------~l~~l~~~a~~lGl~~lvev-~t---- 171 (272)
T 3qja_A 117 LR--K--DFVV--Q--PY-----QIHEARAHGADMLLLIVAALEQS-------VLVSMLDRTESLGMTALVEV-HT---- 171 (272)
T ss_dssp EE--E--SCCC--S--HH-----HHHHHHHTTCSEEEEEGGGSCHH-------HHHHHHHHHHHTTCEEEEEE-SS----
T ss_pred EE--C--cccc--C--HH-----HHHHHHHcCCCEEEEecccCCHH-------HHHHHHHHHHHCCCcEEEEc-CC----
Confidence 42 1 1110 0 11 01222 22466654321111110 01467899999999987654 22
Q ss_pred ccCCCCChHHHHHHHHhcCCcccceEEecC
Q 004721 355 SFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (733)
Q Consensus 355 ~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~ 384 (733)
.+++.+..+.| +|.|-++.
T Consensus 172 --------~ee~~~A~~~G---ad~IGv~~ 190 (272)
T 3qja_A 172 --------EQEADRALKAG---AKVIGVNA 190 (272)
T ss_dssp --------HHHHHHHHHHT---CSEEEEES
T ss_pred --------HHHHHHHHHCC---CCEEEECC
Confidence 37888888999 99998884
No 47
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=76.36 E-value=4.3 Score=41.88 Aligned_cols=49 Identities=14% Similarity=-0.017 Sum_probs=36.7
Q ss_pred EEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeecC-CCeEEEecCCCCcc
Q 004721 93 FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTK-DEAGICFPDLKLDN 147 (733)
Q Consensus 93 ~viaHRG~~~~~pENTl~af~~A~~~g~d~~~iE~DV~lTk-Dg~lVv~HD~~l~r 147 (733)
.+-+|--+.... ...+..|++.|+. +||+||+-.. .|.+-|+|...|..
T Consensus 33 ~~g~HNSY~~g~----~~~i~~qLd~GVR--~LELDIw~n~~~g~~~V~Hg~~l~~ 82 (339)
T 3h4x_A 33 SVGVHNAYEKEK----YRYFADALDSGAA--LLELDLWSNALGRSWRVSHSNPLGN 82 (339)
T ss_dssp EEEETTTTCTTT----CSSHHHHHTTCCS--EEEEEEESSSSSSSCEECSSSCSSC
T ss_pred EeeccccccccC----cccHHHHHHhCCC--EEEEEeecCCCCCCeEEeCCCcccc
Confidence 456665543221 3678999999999 9999999885 45799999887653
No 48
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=74.82 E-value=5.6 Score=40.87 Aligned_cols=90 Identities=11% Similarity=-0.054 Sum_probs=55.4
Q ss_pred hHHHHHHHHcCCeEEEeecCCCCCcccCCCCChH---HHHHHHHhcCCcccceEEecCCC-CccccchhccccCCCCCcC
Q 004721 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPL---TEYLSFIDNGDFSVDGVLSDFPL-TPSAAVDCFAHLGKNASKS 405 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~---~~~~~l~~~G~~~VDgIiTD~P~-~~~~~l~~~~~~~~~~~~~ 405 (733)
.++++.+|+.|+.|.+|+...... ..|+. ...+...++| +|.|-|.+|. .+.++++. .
T Consensus 161 ~~v~~~a~~~GlpvIie~~~G~~~-----~~d~e~i~~aariA~elG---AD~VKt~~t~e~~~~vv~~----------~ 222 (295)
T 3glc_A 161 IQLVDAGMKVGMPTMAVTGVGKDM-----VRDQRYFSLATRIAAEMG---AQIIKTYYVEKGFERIVAG----------C 222 (295)
T ss_dssp HHHHHHHHTTTCCEEEEECC---------CCSHHHHHHHHHHHHHTT---CSEEEEECCTTTHHHHHHT----------C
T ss_pred HHHHHHHHHcCCEEEEECCCCCcc-----CCCHHHHHHHHHHHHHhC---CCEEEeCCCHHHHHHHHHh----------C
Confidence 367889999999999998542111 11221 1345566778 9999999983 33333221 1
Q ss_pred CcceEEecCCCCCCCCCchHHHHHHHHHCCCCee
Q 004721 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (733)
Q Consensus 406 ~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (733)
+-|+ ++=.|.+. -+|-.+...+.|++.||+++
T Consensus 223 ~vPV-v~~GG~~~-~~~~~l~~v~~ai~aGA~Gv 254 (295)
T 3glc_A 223 PVPI-VIAGGKKL-PEREALEMCWQAIDQGASGV 254 (295)
T ss_dssp SSCE-EEECCSCC-CHHHHHHHHHHHHHTTCSEE
T ss_pred CCcE-EEEECCCC-CHHHHHHHHHHHHHhCCeEE
Confidence 2354 44334333 35677778888899999654
No 49
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=74.51 E-value=4.1 Score=41.13 Aligned_cols=101 Identities=10% Similarity=-0.003 Sum_probs=59.2
Q ss_pred hHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHH-HHHHhcCCcccceEEecCCCCccccchhccccCCCCCcCCcc
Q 004721 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEY-LSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~-~~l~~~G~~~VDgIiTD~P~~~~~~l~~~~~~~~~~~~~~~~ 408 (733)
.++++.+|+.|+.+.+++.-+..-.....+.+..++. +.+.+.| +|.|.+.+|.- .+.++..... .+ .
T Consensus 135 ~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~G---ad~i~~~~~~~-~~~l~~i~~~------~~-i 203 (273)
T 2qjg_A 135 GMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELG---ADIVKTSYTGD-IDSFRDVVKG------CP-A 203 (273)
T ss_dssp HHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTT---CSEEEECCCSS-HHHHHHHHHH------CS-S
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcC---CCEEEECCCCC-HHHHHHHHHh------CC-C
Confidence 3578889999999999863110000000111223444 7778889 99999997532 2223322211 11 3
Q ss_pred eEEecCCCCCCCCCchHHHHHHHHHCCCCeeec
Q 004721 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (733)
Q Consensus 409 ~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~ 441 (733)
-+++|.|-+...+|.-+..+..+++.|++++=+
T Consensus 204 pvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 204 PVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp CEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 368888876544555666688888999976643
No 50
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=66.38 E-value=14 Score=36.89 Aligned_cols=140 Identities=9% Similarity=-0.005 Sum_probs=77.0
Q ss_pred cHHHHHHhhCCCceEeeccC--chhhhhc-CCcHHHHHHHHHhhcCCceecc------C--CHHHHHHHHHhcCCCcccc
Q 004721 207 TVQDMARQIKPPGLWLNIQH--DAFYAQH-NLSMRSFVLSVSRSVVVNYISS------P--EVNFLRSIAARFRPSMTKL 275 (733)
Q Consensus 207 tL~e~l~~~~~~~l~iEiK~--~~~~~~~-~~~~~~~v~~~l~~~~~~~i~S------F--~~~~l~~l~~~~p~~~~~~ 275 (733)
.|.++|..-.+..+..|+|. |....-. .... ..+.+..++. ...|+- | +.+.|+.+++.. +.|+
T Consensus 30 ~f~~al~~~~~~~vIaE~K~aSPSkG~i~~~~~~-~~iA~~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~v---~lPv 104 (251)
T 1i4n_A 30 RFLEVLSGKERVKIIAEFKKASPSAGDINADASL-EDFIRMYDEL-ADAISILTEKHYFKGDPAFVRAARNLT---CRPI 104 (251)
T ss_dssp HHHHHHCCSSSCEEEEEECSBCSSSCBSCTTCCH-HHHHHHHHHH-CSEEEEECCCSSSCCCTHHHHHHHTTC---CSCE
T ss_pred CHHHHHhhCCCceEEEeecCCCCCCCccCCCCCH-HHHHHHHHHh-CCceEEEecccccCCCHHHHHHHHHhC---CCCE
Confidence 47777753223679999994 3321100 1122 2233333333 323322 2 567788888875 3555
Q ss_pred hhhhcCCCccCCCCCcchhHHHhhHHHHH-hhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCc
Q 004721 276 VFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPI 354 (733)
Q Consensus 276 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~ 354 (733)
+. .+... ..|. +.+.+ ..|+.+......+... .-.++++.+|+.|+.+.+=+-+
T Consensus 105 Lr----KDfi~----~~~q-----i~ea~~~GAD~ilLi~a~l~~~-------~l~~l~~~a~~lGl~~lvEv~~----- 159 (251)
T 1i4n_A 105 LA----KDFYI----DTVQ-----VKLASSVGADAILIIARILTAE-------QIKEIYEAAEELGMDSLVEVHS----- 159 (251)
T ss_dssp EE----ECCCC----STHH-----HHHHHHTTCSEEEEEGGGSCHH-------HHHHHHHHHHTTTCEEEEEECS-----
T ss_pred EE----eeCCC----CHHH-----HHHHHHcCCCEEEEecccCCHH-------HHHHHHHHHHHcCCeEEEEeCC-----
Confidence 42 11111 0121 12222 2356554433322110 1257999999999999998643
Q ss_pred ccCCCCChHHHHHHHHhc-CCcccceEEecCCCC
Q 004721 355 SFNYSYDPLTEYLSFIDN-GDFSVDGVLSDFPLT 387 (733)
Q Consensus 355 ~~~~~~d~~~~~~~l~~~-G~~~VDgIiTD~P~~ 387 (733)
.+|+++..++ | +|.|-+|.+++
T Consensus 160 --------~eE~~~A~~l~g---~~iIGinnr~l 182 (251)
T 1i4n_A 160 --------REDLEKVFSVIR---PKIIGINTRDL 182 (251)
T ss_dssp --------HHHHHHHHTTCC---CSEEEEECBCT
T ss_pred --------HHHHHHHHhcCC---CCEEEEeCccc
Confidence 4789999999 9 99998888764
No 51
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=62.99 E-value=9.5 Score=39.12 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=59.7
Q ss_pred hHHHHHHHHcCCeEEEeec---C-CCCCcccCCCCCh---HHHHHHHHhcCCcccc----eEEecCCCCccccchhcccc
Q 004721 330 TTIVLDAHKERLEVFASNF---A-NDIPISFNYSYDP---LTEYLSFIDNGDFSVD----GVLSDFPLTPSAAVDCFAHL 398 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTv---n-~~~~~~~~~~~d~---~~~~~~l~~~G~~~VD----gIiTD~P~~~~~~l~~~~~~ 398 (733)
.+.+++||+.|+.+.+|.+ . .... .-..|+ ..-.+-..++| +| .|=|.+|+.+.++++.-
T Consensus 166 a~vv~ea~~~GlP~~~ep~~y~r~gg~v---~~~~dp~~Va~aaRiAaELG---ADs~~tivK~~y~e~f~~Vv~a~--- 236 (307)
T 3fok_A 166 AHAVNEAAAAQLPIMLEPFMSNWVNGKV---VNDLSTDAVIQSVAIAAGLG---NDSSYTWMKLPVVEEMERVMEST--- 236 (307)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEEETTEE---EECCSHHHHHHHHHHHHTCS---SCCSSEEEEEECCTTHHHHGGGC---
T ss_pred HHHHHHHHHcCCcEEEEeeccccCCCCc---CCCCCHHHHHHHHHHHHHhC---CCcCCCEEEeCCcHHHHHHHHhC---
Confidence 4688999999999999832 1 1100 000122 12234445567 99 99999997765555432
Q ss_pred CCCCCcCCcceEEecCCCCC-CCCCchHHHHHHHHH-CCCCee
Q 004721 399 GKNASKSANLLVISKNGASG-DYPSCTNLAYQKAIS-DGVDFI 439 (733)
Q Consensus 399 ~~~~~~~~~~~iIaHRG~~~-~~PENTl~Af~~A~~-~Gad~i 439 (733)
+.|.+|+ |+.. .-+|.++.-.+.|++ .|+.++
T Consensus 237 -------~vPVVia--GG~k~~~~~e~L~~v~~A~~~aGa~Gv 270 (307)
T 3fok_A 237 -------TMPTLLL--GGEGGNDPDATFASWEHALTLPGVRGL 270 (307)
T ss_dssp -------SSCEEEE--CCSCC--CHHHHHHHHHHTTSTTEEEE
T ss_pred -------CCCEEEe--CCCCCCCHHHHHHHHHHHHHhCCCeEE
Confidence 3578887 5544 478999999999999 698765
No 52
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=61.55 E-value=37 Score=34.29 Aligned_cols=141 Identities=8% Similarity=-0.106 Sum_probs=80.8
Q ss_pred ccHHHHHHhh---CCCceEeeccCchhhhh---cCCcHHHHHHHHHhhcCCceecc------C--CHHHHHHHHHhcCCC
Q 004721 206 LTVQDMARQI---KPPGLWLNIQHDAFYAQ---HNLSMRSFVLSVSRSVVVNYISS------P--EVNFLRSIAARFRPS 271 (733)
Q Consensus 206 ptL~e~l~~~---~~~~l~iEiK~~~~~~~---~~~~~~~~v~~~l~~~~~~~i~S------F--~~~~l~~l~~~~p~~ 271 (733)
..|.++|... .+..++-|+|..+.... ...+. ..+.+...+.|...|+- | +.+.|+.+++..
T Consensus 44 ~~f~~al~~~~~~~~~~vIaE~KraSPSkG~i~~~~dp-~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v--- 119 (272)
T 3tsm_A 44 RGFLKALEAKRAAGQFALIAEIKKASPSKGLIRPDFDP-PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC--- 119 (272)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEECSEETTTEESCSSCCH-HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS---
T ss_pred CCHHHHHhhccccCCceEEEEeccCCCCCCccCCCCCH-HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc---
Confidence 4688888753 24789999994332211 01122 34556666777643322 3 667888888765
Q ss_pred cccchhhhcCCCccCCCCCcchhHHHhhHHHH-HhhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCC
Q 004721 272 MTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFI-KTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAN 350 (733)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~ 350 (733)
+.|+... +.+. ..|. +.+. ...|+++......+-.. .-.++++.+|+.|+.+.+=+-
T Consensus 120 ~lPVl~K----dfi~----d~~q-----i~ea~~~GAD~VlLi~a~L~~~-------~l~~l~~~a~~lGl~~lvevh-- 177 (272)
T 3tsm_A 120 SLPALRK----DFLF----DPYQ-----VYEARSWGADCILIIMASVDDD-------LAKELEDTAFALGMDALIEVH-- 177 (272)
T ss_dssp SSCEEEE----SCCC----STHH-----HHHHHHTTCSEEEEETTTSCHH-------HHHHHHHHHHHTTCEEEEEEC--
T ss_pred CCCEEEC----CccC----CHHH-----HHHHHHcCCCEEEEcccccCHH-------HHHHHHHHHHHcCCeEEEEeC--
Confidence 3565421 1110 0111 2222 22366654432222110 014689999999999887662
Q ss_pred CCCcccCCCCChHHHHHHHHhcCCcccceEEecCCC
Q 004721 351 DIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (733)
Q Consensus 351 ~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~ 386 (733)
+.+|+++..++| +|.|-++.-+
T Consensus 178 -----------~~eEl~~A~~~g---a~iIGinnr~ 199 (272)
T 3tsm_A 178 -----------DEAEMERALKLS---SRLLGVNNRN 199 (272)
T ss_dssp -----------SHHHHHHHTTSC---CSEEEEECBC
T ss_pred -----------CHHHHHHHHhcC---CCEEEECCCC
Confidence 248899999999 9999888544
No 53
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=60.77 E-value=13 Score=38.34 Aligned_cols=96 Identities=15% Similarity=0.067 Sum_probs=58.8
Q ss_pred hHHHHHHHHcCCeEEEeecCCCCCcccCCCCCh---HHH-HHHHHhcCCcccceEEecCC-------CCccccchhcccc
Q 004721 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP---LTE-YLSFIDNGDFSVDGVLSDFP-------LTPSAAVDCFAHL 398 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~---~~~-~~~l~~~G~~~VDgIiTD~P-------~~~~~~l~~~~~~ 398 (733)
.++++.+++.|+.+.+|..-...- ..-..++ ..+ ++.+.++| +|.|=+..| +.+.++++....
T Consensus 145 ~~v~~~~~~~G~p~lv~~~~~g~~--v~~~~~~~~~v~~aa~~a~~lG---aD~iKv~~~~~~~g~~~~~~~vv~~~~~- 218 (304)
T 1to3_A 145 KEFNELCHSNGLLSIIEPVVRPPR--CGDKFDREQAIIDAAKELGDSG---ADLYKVEMPLYGKGARSDLLTASQRLNG- 218 (304)
T ss_dssp HHHHHHHHTTTCEEEEEEEECCCS--SCSCCCHHHHHHHHHHHHTTSS---CSEEEECCGGGGCSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHcCCcEEEEEECCCCc--cccCCChhHHHHHHHHHHHHcC---CCEEEeCCCcCCCCCHHHHHHHHHhccc-
Confidence 467889999999999998632210 0000122 233 67777778 999999887 333333333111
Q ss_pred CCCCCcCCcceEEecCCCCCCCCCchHHHHHHHHHCCCCee
Q 004721 399 GKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (733)
Q Consensus 399 ~~~~~~~~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (733)
..+.|.|+.=.|. -+|..+..++.|++.|++++
T Consensus 219 -----~~~~P~Vv~aGG~---~~~~~~~~~~~a~~aGa~Gv 251 (304)
T 1to3_A 219 -----HINMPWVILSSGV---DEKLFPRAVRVAMEAGASGF 251 (304)
T ss_dssp -----TCCSCEEECCTTS---CTTTHHHHHHHHHHTTCCEE
T ss_pred -----cCCCCeEEEecCC---CHHHHHHHHHHHHHcCCeEE
Confidence 0123534444444 47788889999999998654
No 54
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=49.38 E-value=22 Score=36.01 Aligned_cols=87 Identities=15% Similarity=0.225 Sum_probs=55.5
Q ss_pred hHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccch---------------h
Q 004721 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD---------------C 394 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l~---------------~ 394 (733)
-++|++||+.|+...++++| .++.+.+.++| +|.|...-|-+.-..+. .
T Consensus 153 ve~I~~A~~~gL~Ti~~v~~-------------~eeA~amA~ag---pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~ 216 (286)
T 2p10_A 153 VEMIAEAHKLDLLTTPYVFS-------------PEDAVAMAKAG---ADILVCHMGLTTGGAIGARSGKSMDDCVSLINE 216 (286)
T ss_dssp HHHHHHHHHTTCEECCEECS-------------HHHHHHHHHHT---CSEEEEECSCC---------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEecCC-------------HHHHHHHHHcC---CCEEEECCCCCCCCcccCCCcccHHHhHHHHHH
Confidence 46999999999999999865 37888999999 99999999933222111 1
Q ss_pred ccccCCCCCcCCcceEEecCCCCCCCCCchHHHHHHHHHC--CCCee
Q 004721 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISD--GVDFI 439 (733)
Q Consensus 395 ~~~~~~~~~~~~~~~iIaHRG~~~~~PENTl~Af~~A~~~--Gad~i 439 (733)
..+. -...++.++++.|-|. =+|-.=.+++++. |++++
T Consensus 217 i~~a--~~~vnpdvivLc~gGp-----IstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 217 CIEA--ARTIRDDIIILSHGGP-----IANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp HHHH--HHHHCSCCEEEEESTT-----CCSHHHHHHHHHHCTTCCEE
T ss_pred HHHH--HHHhCCCcEEEecCCC-----CCCHHHHHHHHhcCCCccEE
Confidence 1100 0123556788999862 2233345555555 66654
No 55
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=47.66 E-value=36 Score=32.26 Aligned_cols=56 Identities=20% Similarity=0.145 Sum_probs=39.6
Q ss_pred chHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHH
Q 004721 647 ATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRS 710 (733)
Q Consensus 647 ~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~ 710 (733)
-++.++.+|++|++|++..=.-. -.+.|. ....++...++|||+|=.+..+....+
T Consensus 45 L~~iv~~ik~~gK~vivh~DlI~------GLs~d~--~ai~fL~~~~pdGIIsTk~~~i~~Akk 100 (188)
T 1vkf_A 45 LKFHLKILKDRGKTVFVDMDFVN------GLGEGE--EAILFVKKAGADGIITIKPKNYVVAKK 100 (188)
T ss_dssp HHHHHHHHHHTTCEEEEEGGGEE------TCCSSH--HHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEecCccc------ccCCCH--HHHHHHHhcCCCEEEcCcHHHHHHHHH
Confidence 47899999999999999842211 122333 333444678999999999998877654
No 56
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=46.61 E-value=1.3e+02 Score=25.37 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=35.4
Q ss_pred hHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHH
Q 004721 648 TDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYR 709 (733)
Q Consensus 648 ~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l 709 (733)
+++++.++.+|..|++---|..+ |...+..+-+..-|||.-..-.-+.+.+..
T Consensus 93 kdfieeakergvevfvvynnkdd---------drrkeaqqefrsdgvdvrtvsdkeelieqv 145 (162)
T 2l82_A 93 KDFIEEAKERGVEVFVVYNNKDD---------DRRKEAQQEFRSDGVDVRTVSDKEELIEQV 145 (162)
T ss_dssp HHHHHHHHHTTCEEEEEEECSCH---------HHHHHHHHHHCCSSCEEEEESSHHHHHHHH
T ss_pred HHHHHHHHhcCcEEEEEecCCCc---------hhHHHHHHHhhhcCceeeecCCHHHHHHHH
Confidence 67899999999999876544432 333455555567889876655555554433
No 57
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=44.09 E-value=44 Score=36.32 Aligned_cols=139 Identities=14% Similarity=0.053 Sum_probs=79.2
Q ss_pred cHHHHHHhhCCCceEeeccCchhhhh--c-CCcHHHHHHHHHhhcCCceecc--------CCHHHHHHHHHhcCCCcccc
Q 004721 207 TVQDMARQIKPPGLWLNIQHDAFYAQ--H-NLSMRSFVLSVSRSVVVNYISS--------PEVNFLRSIAARFRPSMTKL 275 (733)
Q Consensus 207 tL~e~l~~~~~~~l~iEiK~~~~~~~--~-~~~~~~~v~~~l~~~~~~~i~S--------F~~~~l~~l~~~~p~~~~~~ 275 (733)
.|.++|.. .+..++-|+|..+.... . .... ..+.+..++. ...|+- =+.+.|+.+++.. +.|+
T Consensus 38 ~f~~al~~-~~~~vIaEvKraSPSkG~i~~~~~~-~~iA~~y~~~-A~~IsvLTd~~~F~gs~~dL~~vr~~v---~lPv 111 (452)
T 1pii_A 38 HFYDALQG-ARTAFILECKKASPSKGVIRDDFDP-ARIAAIYKHY-ASAISVLTDEKYFQGSFNFLPIVSQIA---PQPI 111 (452)
T ss_dssp CHHHHHCS-SSCEEEEEECSEETTTEESCSSCCH-HHHHHHHTTT-CSEEEEECCSTTTCCCTTHHHHHHHHC---CSCE
T ss_pred CHHHHHhc-CCCceEEEecCCCCCCCccCCCCCH-HHHHHHHHhh-CcEEEEEecccccCCCHHHHHHHHHhc---CCCe
Confidence 57777753 34779999994322211 1 1122 3334444444 433332 2556788888876 3555
Q ss_pred hhhhcCCCccCCCCCcchhHHHhhHHHHH-hhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCc
Q 004721 276 VFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPI 354 (733)
Q Consensus 276 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~ 354 (733)
+. .+.+. ..|. +.+.+ ..|+.+......+... .-.++++.+|+.|+.+.+=+=
T Consensus 112 Lr----KDFI~----d~~Q-----i~ea~~~GAD~ILLi~a~l~~~-------~l~~l~~~a~~lgm~~LvEvh------ 165 (452)
T 1pii_A 112 LC----KDFII----DPYQ-----IYLARYYQADACLLMLSVLDDD-------QYRQLAAVAHSLEMGVLTEVS------ 165 (452)
T ss_dssp EE----ESCCC----SHHH-----HHHHHHTTCSEEEEETTTCCHH-------HHHHHHHHHHHTTCEEEEEEC------
T ss_pred EE----EeccC----CHHH-----HHHHHHcCCCEEEEEcccCCHH-------HHHHHHHHHHHcCCeEEEEeC------
Confidence 42 11111 0121 22222 2366554433322110 125799999999999998763
Q ss_pred ccCCCCChHHHHHHHHhcCCcccceEEecCCCC
Q 004721 355 SFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (733)
Q Consensus 355 ~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~ 387 (733)
+.+|+++.+++| +|.|-+|..++
T Consensus 166 -------~~eE~~~A~~lg---a~iIGinnr~L 188 (452)
T 1pii_A 166 -------NEEEQERAIALG---AKVVGINNRDL 188 (452)
T ss_dssp -------SHHHHHHHHHTT---CSEEEEESEET
T ss_pred -------CHHHHHHHHHCC---CCEEEEeCCCC
Confidence 248999999999 99999998765
No 58
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=43.66 E-value=2.3e+02 Score=27.36 Aligned_cols=143 Identities=15% Similarity=0.124 Sum_probs=75.4
Q ss_pred HHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhccCceEEEE
Q 004721 527 LSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREKTSYELVYK 606 (733)
Q Consensus 527 LeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~l 606 (733)
++++.+.+...+ ++.+........ +-.......++.+...+.|.. -+-+ -+.+.++.+|+..+.|+.-+
T Consensus 7 ~~~~~~~~~~~~---~livscq~~~~~-pl~~~~~~~~~A~a~~~~Ga~-----~i~~--~~~~~i~~ir~~v~~Pvig~ 75 (229)
T 3q58_A 7 LARLEQSVHENG---GLIVSCQPVPGS-PMDKPEIVAAMAQAAASAGAV-----AVRI--EGIENLRTVRPHLSVPIIGI 75 (229)
T ss_dssp HHHHHHHHHHHC---CEEEECCCCTTS-TTCSHHHHHHHHHHHHHTTCS-----EEEE--ESHHHHHHHGGGCCSCEEEE
T ss_pred HHHHHHHhhhcC---CEEEEEeCCCCC-CCCCcchHHHHHHHHHHCCCc-----EEEE--CCHHHHHHHHHhcCCCEEEE
Confidence 566666662221 477766632210 001112345667777777766 2333 46788999998877886533
Q ss_pred eecccch----hhhHHHHHHHHHHhHhcCCCcccccCCcc--ccccchHHHHHHHHCCCcEEEEecCCcccccccccCCC
Q 004721 607 VKENIRD----ALNQTIEDIKKFADSVVLSKESVYPLNSA--FITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSD 680 (733)
Q Consensus 607 ~~~~~~~----~~~~~l~~i~~~a~~i~~~~~~i~~~~~~--~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d 680 (733)
....+.+ .++ .++++... ...+. +.+...... ......++++.+|+.|+.+.+- +.+.+
T Consensus 76 ~k~~~~~~~~~I~~-~~~~i~~~-~~aGa--d~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~-v~t~e---------- 140 (229)
T 3q58_A 76 IKRDLTGSPVRITP-YLQDVDAL-AQAGA--DIIAFDASFRSRPVDIDSLLTRIRLHGLLAMAD-CSTVN---------- 140 (229)
T ss_dssp CBCCCSSCCCCBSC-SHHHHHHH-HHHTC--SEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEE-CSSHH----------
T ss_pred EeecCCCCceEeCc-cHHHHHHH-HHcCC--CEEEECccccCChHHHHHHHHHHHHCCCEEEEe-cCCHH----------
Confidence 3222111 111 12333222 11222 122111000 0012367999999999998874 44443
Q ss_pred hHHHHHHHHhhcCcCEEEe
Q 004721 681 PTVEINTYYEGAGIDGVIT 699 (733)
Q Consensus 681 ~~~e~~~~l~~~GVdgIiT 699 (733)
+..++. +.|+|.|.+
T Consensus 141 ---ea~~a~-~~Gad~Ig~ 155 (229)
T 3q58_A 141 ---EGISCH-QKGIEFIGT 155 (229)
T ss_dssp ---HHHHHH-HTTCSEEEC
T ss_pred ---HHHHHH-hCCCCEEEe
Confidence 677775 999999964
No 59
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=43.64 E-value=48 Score=31.53 Aligned_cols=57 Identities=12% Similarity=0.023 Sum_probs=39.3
Q ss_pred chHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhh-cCcCEEEeCChHHHHHHHHh
Q 004721 647 ATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEG-AGIDGVITEFPMTAARYRSK 711 (733)
Q Consensus 647 ~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~-~GVdgIiTD~P~~~~~~l~~ 711 (733)
-++.++.+|++|..+++. ++.-. -.+.|.. ...++.+ .++|||||=.+..+....+.
T Consensus 43 l~~~v~~lk~~~K~v~Vh-~Dli~-----Gls~d~~--ai~fL~~~~~pdGIIsTk~~~i~~Ak~~ 100 (192)
T 3kts_A 43 LKALVKYAQAGGKKVLLH-ADLVN-----GLKNDDY--AIDFLCTEICPDGIISTRGNAIMKAKQH 100 (192)
T ss_dssp HHHHHHHHHHTTCEEEEE-GGGEE-----TCCCSHH--HHHHHHHTTCCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCeEEEe-cCchh-----ccCCcHH--HHHHHHhCCCCCEEEeCcHHHHHHHHHC
Confidence 378999999999999984 33322 2334443 3334433 58999999999988876543
No 60
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=41.57 E-value=14 Score=31.81 Aligned_cols=44 Identities=16% Similarity=0.050 Sum_probs=32.0
Q ss_pred hHHHHHHHHc-------CCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCC
Q 004721 330 TTIVLDAHKE-------RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (733)
Q Consensus 330 ~~~v~~ah~~-------Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~ 387 (733)
+++++.|+++ |+.++.|-.++ ....++++.+.. +||+++=.-+.
T Consensus 47 ~e~v~~~REAiLDNIDlG~el~~WKp~e-----------Vdkm~~k~~q~~---~dGl~iYCDde 97 (126)
T 2rbg_A 47 QELVTLIREALLENIDIGYELFLWKKNE-----------VDIFLKNLEKSE---VDGLLVYCDDE 97 (126)
T ss_dssp HHHHHHTHHHHHHTTTSEEEEEEECGGG-----------HHHHHHHHTTCC---CCEEEEEECGG
T ss_pred HHHHHHHHHHHHhccccceEEEEeCHHH-----------HHHHHHHHHHhC---CCceEEEeCCC
Confidence 5677777664 99999998654 124577777777 99999865554
No 61
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=39.56 E-value=74 Score=31.03 Aligned_cols=188 Identities=12% Similarity=0.088 Sum_probs=93.7
Q ss_pred HHHHHHhh-CCCceEeeccCchhhhhcCCcHHHHHHHHHhhcCCceeccCCHHHHHHHHHhcCCCcccchhhhcCCC---
Q 004721 208 VQDMARQI-KPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKS--- 283 (733)
Q Consensus 208 L~e~l~~~-~~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~--- 283 (733)
+.++++.. .+-+|.+........+-+.......+.+...+.|..-|+.=+.+.++++|+.. +.|++- +...+
T Consensus 7 ~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~~~~i~~ir~~v---~~Pvig-~~k~~~~~ 82 (229)
T 3q58_A 7 LARLEQSVHENGGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIEGIENLRTVRPHL---SVPIIG-IIKRDLTG 82 (229)
T ss_dssp HHHHHHHHHHHCCEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEESHHHHHHHGGGC---CSCEEE-ECBCCCSS
T ss_pred HHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEECCHHHHHHHHHhc---CCCEEE-EEeecCCC
Confidence 34444444 12356665542211111111244555666667777655445678899998876 355431 11110
Q ss_pred -ccCCCCCcchhHHHhhHHHHHhhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCCh
Q 004721 284 -EIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDP 362 (733)
Q Consensus 284 -~~~~~~~~~~~~~~~~l~~~~~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~ 362 (733)
.+. .++ .+..+ .......++.+......... .....++++.+|+.|+.+.+-. . .
T Consensus 83 ~~~~-I~~-~~~~i---~~~~~aGad~I~l~~~~~~~------p~~l~~~i~~~~~~g~~v~~~v-~------------t 138 (229)
T 3q58_A 83 SPVR-ITP-YLQDV---DALAQAGADIIAFDASFRSR------PVDIDSLLTRIRLHGLLAMADC-S------------T 138 (229)
T ss_dssp CCCC-BSC-SHHHH---HHHHHHTCSEEEEECCSSCC------SSCHHHHHHHHHHTTCEEEEEC-S------------S
T ss_pred CceE-eCc-cHHHH---HHHHHcCCCEEEECccccCC------hHHHHHHHHHHHHCCCEEEEec-C------------C
Confidence 000 000 11111 01122235544322211100 0123689999999999998753 2 2
Q ss_pred HHHHHHHHhcCCcccceEEec-C--CCC------ccccchhccccCCCCCcCCcceEEecCCCCCCCCCchHHHHHHHHH
Q 004721 363 LTEYLSFIDNGDFSVDGVLSD-F--PLT------PSAAVDCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAIS 433 (733)
Q Consensus 363 ~~~~~~l~~~G~~~VDgIiTD-~--P~~------~~~~l~~~~~~~~~~~~~~~~~iIaHRG~~~~~PENTl~Af~~A~~ 433 (733)
.++.+++.+.| +|.|.+. + ... -.+.++.... . ...+||-.|- +|..-..++++
T Consensus 139 ~eea~~a~~~G---ad~Ig~~~~g~t~~~~~~~~~~~li~~l~~------~--~ipvIA~GGI------~t~~d~~~~~~ 201 (229)
T 3q58_A 139 VNEGISCHQKG---IEFIGTTLSGYTGPITPVEPDLAMVTQLSH------A--GCRVIAEGRY------NTPALAANAIE 201 (229)
T ss_dssp HHHHHHHHHTT---CSEEECTTTTSSSSCCCSSCCHHHHHHHHT------T--TCCEEEESSC------CSHHHHHHHHH
T ss_pred HHHHHHHHhCC---CCEEEecCccCCCCCcCCCCCHHHHHHHHH------c--CCCEEEECCC------CCHHHHHHHHH
Confidence 47899999999 9999753 1 110 0011222110 1 2346766654 24555677788
Q ss_pred CCCCeee
Q 004721 434 DGVDFID 440 (733)
Q Consensus 434 ~Gad~iE 440 (733)
.||+++=
T Consensus 202 ~GadgV~ 208 (229)
T 3q58_A 202 HGAWAVT 208 (229)
T ss_dssp TTCSEEE
T ss_pred cCCCEEE
Confidence 8998763
No 62
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=37.17 E-value=3e+02 Score=26.77 Aligned_cols=140 Identities=15% Similarity=0.092 Sum_probs=79.7
Q ss_pred HHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHHHHHHHHcCCCCCCCceEEEEeCCHH---HHHHHHhc-cCceE
Q 004721 528 SDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSS---VLMKLREK-TSYEL 603 (733)
Q Consensus 528 eEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~---~L~~lk~~-p~~~~ 603 (733)
.++++.+... ++.-=+..... +-...+.+.+-+.|.. -+-+..-++. .++.+++. |+..+
T Consensus 25 ~~~~~~l~~~----~vv~Vir~~~~-------~~a~~~a~al~~gGi~-----~iEvt~~t~~a~e~I~~l~~~~~~~~i 88 (232)
T 4e38_A 25 STINNQLKAL----KVIPVIAIDNA-------EDIIPLGKVLAENGLP-----AAEITFRSDAAVEAIRLLRQAQPEMLI 88 (232)
T ss_dssp HHHHHHHHHH----CEEEEECCSSG-------GGHHHHHHHHHHTTCC-----EEEEETTSTTHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHhC----CEEEEEEcCCH-------HHHHHHHHHHHHCCCC-----EEEEeCCCCCHHHHHHHHHHhCCCCEE
Confidence 4577777776 44433442211 1234567777777876 4444433343 56666666 77655
Q ss_pred EEEeecccchhhhHHHHHHHHHHhHhcCCCcccccCCccccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHH
Q 004721 604 VYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTV 683 (733)
Q Consensus 604 ~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~~~~~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~ 683 (733)
+.-. . ++.+..+.+.. . ....++.. ..++++++.++++|+.+..- +.++.
T Consensus 89 GaGT---V--lt~~~a~~Ai~----A--GA~fIvsP-----~~~~~vi~~~~~~gi~~ipG-v~Tpt------------- 138 (232)
T 4e38_A 89 GAGT---I--LNGEQALAAKE----A--GATFVVSP-----GFNPNTVRACQEIGIDIVPG-VNNPS------------- 138 (232)
T ss_dssp EEEC---C--CSHHHHHHHHH----H--TCSEEECS-----SCCHHHHHHHHHHTCEEECE-ECSHH-------------
T ss_pred eECC---c--CCHHHHHHHHH----c--CCCEEEeC-----CCCHHHHHHHHHcCCCEEcC-CCCHH-------------
Confidence 4321 1 11222222211 1 22333321 12588999999999999774 34555
Q ss_pred HHHHHHhhcCcCEEEeCChHHH---HHHHHhhccc
Q 004721 684 EINTYYEGAGIDGVITEFPMTA---ARYRSKLVRK 715 (733)
Q Consensus 684 e~~~~l~~~GVdgIiTD~P~~~---~~~l~~~~~~ 715 (733)
|+.+.+ ++|+|.|-. +|... .++++.....
T Consensus 139 Ei~~A~-~~Gad~vK~-FPa~~~gG~~~lkal~~p 171 (232)
T 4e38_A 139 TVEAAL-EMGLTTLKF-FPAEASGGISMVKSLVGP 171 (232)
T ss_dssp HHHHHH-HTTCCEEEE-CSTTTTTHHHHHHHHHTT
T ss_pred HHHHHH-HcCCCEEEE-CcCccccCHHHHHHHHHH
Confidence 888886 999999987 88543 3666665444
No 63
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=36.47 E-value=12 Score=42.60 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=58.9
Q ss_pred hHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccc-hhccccCCCCCcCCcc
Q 004721 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV-DCFAHLGKNASKSANL 408 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l-~~~~~~~~~~~~~~~~ 408 (733)
+++++.||+.|+++..|.--.. +..+-.++++.+.++| |+||=+|+-+.-.+.. +.+.+.-+ .....+.
T Consensus 350 ~~l~~Ya~~kgV~i~lw~~~~~------~~~~~~~~~~~~~~~G---v~gvK~Df~~~~~Q~~v~~y~~i~~-~aA~~~l 419 (641)
T 3a24_A 350 KELVDYAASKNVGIILWAGYHA------FERDMENVCRHYAEMG---VKGFKVDFMDRDDQEMTAFNYRAAE-MCAKYKL 419 (641)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHH------HHTSHHHHHHHHHHHT---CCEEEEECCCCCSHHHHHHHHHHHH-HHHHTTC
T ss_pred HHHHHHHHhcCCEEEEEeeCcc------hHHHHHHHHHHHHHcC---CCEEEECCCCCCcHHHHHHHHHHHH-HHHHcCC
Confidence 7899999999999999984321 1122346889999999 9999999977544332 22211100 1122346
Q ss_pred eEEecCCCCCCCCCchHHHHHHHH-----HCCCCeeecCce
Q 004721 409 LVISKNGASGDYPSCTNLAYQKAI-----SDGVDFIDCPVQ 444 (733)
Q Consensus 409 ~iIaHRG~~~~~PENTl~Af~~A~-----~~Gad~iE~DV~ 444 (733)
+|..|--.. |- ++++.. ..|+.+.|..-+
T Consensus 420 ~V~fHg~~~---P~----Gl~RTyPN~~t~EgvrG~E~~~~ 453 (641)
T 3a24_A 420 ILDLHGTHK---PA----GLNRTYPNVLNFEGVNGLEQMKW 453 (641)
T ss_dssp EEEECSCCC---CT----THHHHCTTEEEECCSCCGGGGGT
T ss_pred EEEcCCCcC---CC----cccccccchhhhhhhceeeeccc
Confidence 788883221 11 111211 357778887665
No 64
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=36.14 E-value=72 Score=30.83 Aligned_cols=99 Identities=6% Similarity=-0.069 Sum_probs=60.8
Q ss_pred hHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCccccchhccccCCCCCcCCcce
Q 004721 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANLL 409 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~~~l~~~~~~~~~~~~~~~~~ 409 (733)
.++++.+ +.|+-+.+.+..++. +....+.+..+..+.+.+.| +++|..|.|+.+..+.+.. ..|+
T Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~p-~~~~~~~~~~~~a~~~~~~G---~~~i~~~~~~~i~~i~~~~----------~~p~ 72 (234)
T 1yxy_A 8 EKLMEQL-KGGIIVSCQALPGEP-LYSETGGIMPLMAKAAQEAG---AVGIRANSVRDIKEIQAIT----------DLPI 72 (234)
T ss_dssp HHHHHHH-TTSCEEECCCCTTST-TCCTTCCSHHHHHHHHHHHT---CSEEEEESHHHHHHHHTTC----------CSCE
T ss_pred HHHHHHH-hCCEEEEeeCCCCCC-CcCCccchHHHHHHHHHHCC---CcEeecCCHHHHHHHHHhC----------CCCE
Confidence 3577778 888999888876431 11110003345677777889 9999998776544333221 2344
Q ss_pred EEecCC---CCCCCCCchHHHHHHHHHCCCCeeecCc
Q 004721 410 VISKNG---ASGDYPSCTNLAYQKAISDGVDFIDCPV 443 (733)
Q Consensus 410 iIaHRG---~~~~~PENTl~Af~~A~~~Gad~iE~DV 443 (733)
+-.=|+ .....-+++....+.+++.|||.|.++.
T Consensus 73 i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~ 109 (234)
T 1yxy_A 73 IGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDC 109 (234)
T ss_dssp EEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEEC
T ss_pred EeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcc
Confidence 322222 1234456788889999999999776554
No 65
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=33.97 E-value=63 Score=32.28 Aligned_cols=99 Identities=13% Similarity=0.081 Sum_probs=54.1
Q ss_pred hHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHH-HHHHHhcCCcccceEEecCCCCccccchhccccCCCCCcCCc-
Q 004721 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSAN- 407 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~-~~~l~~~G~~~VDgIiTD~P~~~~~~l~~~~~~~~~~~~~~~- 407 (733)
..+++.+|+.|+.+..|+.-+-.-..-..+.+.... .+...+.| +|+|-|-+|... +.++.+... . +.
T Consensus 128 ~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~G---AD~vkt~~~~~~-e~~~~~~~~-----~-~~~ 197 (263)
T 1w8s_A 128 ARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELG---ADAMKIKYTGDP-KTFSWAVKV-----A-GKV 197 (263)
T ss_dssp HHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHT---CSEEEEECCSSH-HHHHHHHHH-----T-TTS
T ss_pred HHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcC---CCEEEEcCCCCH-HHHHHHHHh-----C-CCC
Confidence 356777889999999997432110000001011122 34556778 999999998421 222222211 1 22
Q ss_pred ceEEecCCCCCCCCCchHHHHHHHHHCCCCee
Q 004721 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (733)
Q Consensus 408 ~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (733)
| |++=.|-+..-+|-.+.-...+++.||+++
T Consensus 198 p-V~asGGi~~~~~~~~l~~i~~~~~aGA~Gv 228 (263)
T 1w8s_A 198 P-VLMSGGPKTKTEEDFLKQVEGVLEAGALGI 228 (263)
T ss_dssp C-EEEECCSCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred e-EEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 4 454456544345666666677779999755
No 66
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=33.35 E-value=52 Score=37.37 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=37.0
Q ss_pred chHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHH
Q 004721 647 ATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMT 704 (733)
Q Consensus 647 ~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~ 704 (733)
-+++++.+|++|+.++.|.--.. |..+.++++..+ .++||+||=+|+-+.
T Consensus 349 i~~l~~Ya~~kgV~i~lw~~~~~-------~~~~~~~~~~~~-~~~Gv~gvK~Df~~~ 398 (641)
T 3a24_A 349 LKELVDYAASKNVGIILWAGYHA-------FERDMENVCRHY-AEMGVKGFKVDFMDR 398 (641)
T ss_dssp HHHHHHHHHHTTCEEEEEEEHHH-------HHTSHHHHHHHH-HHHTCCEEEEECCCC
T ss_pred HHHHHHHHHhcCCEEEEEeeCcc-------hHHHHHHHHHHH-HHcCCCEEEECCCCC
Confidence 37899999999999999963321 233344455555 699999999998653
No 67
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=32.85 E-value=93 Score=30.38 Aligned_cols=188 Identities=12% Similarity=0.064 Sum_probs=92.7
Q ss_pred HHHHHHhh-CCCceEeeccCchhhhhcCCcHHHHHHHHHhhcCCceeccCCHHHHHHHHHhcCCCcccchhhhcCCC---
Q 004721 208 VQDMARQI-KPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKS--- 283 (733)
Q Consensus 208 L~e~l~~~-~~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~i~SF~~~~l~~l~~~~p~~~~~~~~~l~~~~--- 283 (733)
+.++++.. .+-+|.+........+-+.......+.+...+.|...|+.=+.+.++++++.. +.|++- +...+
T Consensus 7 ~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~~~~i~~ir~~v---~~Pvig-~~k~d~~~ 82 (232)
T 3igs_A 7 LEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIEGIDNLRMTRSLV---SVPIIG-IIKRDLDE 82 (232)
T ss_dssp HHHHHHHHHHHCCEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEESHHHHHHHHTTC---CSCEEE-ECBCCCSS
T ss_pred HHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEECCHHHHHHHHHhc---CCCEEE-EEeecCCC
Confidence 34444443 12356665542211111111244556666777777655444678899999876 345431 11110
Q ss_pred -ccCCCCCcchhHHHhhHHHHHhhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcccCCCCCh
Q 004721 284 -EIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDP 362 (733)
Q Consensus 284 -~~~~~~~~~~~~~~~~l~~~~~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~ 362 (733)
.+. .++ .+..+ ...+...++.+......... .....++++.+|+.|+.+.+-. . .
T Consensus 83 ~~~~-I~~-~~~~i---~~~~~~Gad~V~l~~~~~~~------p~~l~~~i~~~~~~g~~v~~~v-~------------t 138 (232)
T 3igs_A 83 SPVR-ITP-FLDDV---DALAQAGAAIIAVDGTARQR------PVAVEALLARIHHHHLLTMADC-S------------S 138 (232)
T ss_dssp CCCC-BSC-SHHHH---HHHHHHTCSEEEEECCSSCC------SSCHHHHHHHHHHTTCEEEEEC-C------------S
T ss_pred cceE-eCc-cHHHH---HHHHHcCCCEEEECccccCC------HHHHHHHHHHHHHCCCEEEEeC-C------------C
Confidence 000 000 11111 01122234544322111100 0123689999999999988743 2 2
Q ss_pred HHHHHHHHhcCCcccceEEec-C--CCCc------cccchhccccCCCCCcCCcceEEecCCCCCCCCCchHHHHHHHHH
Q 004721 363 LTEYLSFIDNGDFSVDGVLSD-F--PLTP------SAAVDCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAIS 433 (733)
Q Consensus 363 ~~~~~~l~~~G~~~VDgIiTD-~--P~~~------~~~l~~~~~~~~~~~~~~~~~iIaHRG~~~~~PENTl~Af~~A~~ 433 (733)
.++.+++.+.| +|.|.+. + .... .+.++.... . ...+||=.|- +|..-..++++
T Consensus 139 ~eea~~a~~~G---ad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~-------~-~ipvIA~GGI------~t~~d~~~~~~ 201 (232)
T 3igs_A 139 VDDGLACQRLG---ADIIGTTMSGYTTPDTPEEPDLPLVKALHD-------A-GCRVIAEGRY------NSPALAAEAIR 201 (232)
T ss_dssp HHHHHHHHHTT---CSEEECTTTTSSSSSCCSSCCHHHHHHHHH-------T-TCCEEEESCC------CSHHHHHHHHH
T ss_pred HHHHHHHHhCC---CCEEEEcCccCCCCCCCCCCCHHHHHHHHh-------c-CCcEEEECCC------CCHHHHHHHHH
Confidence 47889999999 9999753 2 1100 011111111 1 2335665554 24555677778
Q ss_pred CCCCeee
Q 004721 434 DGVDFID 440 (733)
Q Consensus 434 ~Gad~iE 440 (733)
.||+++=
T Consensus 202 ~GadgV~ 208 (232)
T 3igs_A 202 YGAWAVT 208 (232)
T ss_dssp TTCSEEE
T ss_pred cCCCEEE
Confidence 8998763
No 68
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=32.09 E-value=3.6e+02 Score=26.06 Aligned_cols=145 Identities=14% Similarity=0.107 Sum_probs=74.9
Q ss_pred CHHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHHHHHHHHcCCCCCCCceEEEEeCCHHHHHHHHhccCceEEE
Q 004721 526 KLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREKTSYELVY 605 (733)
Q Consensus 526 tLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~ 605 (733)
.++++++.+...+ ++.+........ +-.+......+.+...+.|.. -+.+ -+.+.++.+|+..+.|+.-
T Consensus 6 ~~~~~~~~~~~~~---~livscq~~~~~-pl~~~~~~~~~A~a~~~~Ga~-----~i~~--~~~~~i~~ir~~v~~Pvig 74 (232)
T 3igs_A 6 LLEQLDKNIAASG---GLIVSCQPVPGS-PLDKPEIVAAMALAAEQAGAV-----AVRI--EGIDNLRMTRSLVSVPIIG 74 (232)
T ss_dssp HHHHHHHHHHHHC---CEEEECCCCTTC-TTCSHHHHHHHHHHHHHTTCS-----EEEE--ESHHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHHhhhcC---CEEEEEeCCCCC-CCCCcchHHHHHHHHHHCCCe-----EEEE--CCHHHHHHHHHhcCCCEEE
Confidence 3556666662221 477776632210 001112345667777888766 2333 3578899999887778643
Q ss_pred Eeecccch---hhhHHHHHHHHHHhHhcCCCcccccCCcc--ccccchHHHHHHHHCCCcEEEEecCCcccccccccCCC
Q 004721 606 KVKENIRD---ALNQTIEDIKKFADSVVLSKESVYPLNSA--FITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSD 680 (733)
Q Consensus 606 l~~~~~~~---~~~~~l~~i~~~a~~i~~~~~~i~~~~~~--~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d 680 (733)
+....+.+ +-...++++... ...+. +.+...... ......++++.+|+.|+.+.+- +.+.+
T Consensus 75 ~~k~d~~~~~~~I~~~~~~i~~~-~~~Ga--d~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~-v~t~e---------- 140 (232)
T 3igs_A 75 IIKRDLDESPVRITPFLDDVDAL-AQAGA--AIIAVDGTARQRPVAVEALLARIHHHHLLTMAD-CSSVD---------- 140 (232)
T ss_dssp ECBCCCSSCCCCBSCSHHHHHHH-HHHTC--SEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEE-CCSHH----------
T ss_pred EEeecCCCcceEeCccHHHHHHH-HHcCC--CEEEECccccCCHHHHHHHHHHHHHCCCEEEEe-CCCHH----------
Confidence 32221111 000112333222 11222 222111000 0012367999999999998774 44444
Q ss_pred hHHHHHHHHhhcCcCEEEe
Q 004721 681 PTVEINTYYEGAGIDGVIT 699 (733)
Q Consensus 681 ~~~e~~~~l~~~GVdgIiT 699 (733)
+..++. +.|+|.|.+
T Consensus 141 ---ea~~a~-~~Gad~Ig~ 155 (232)
T 3igs_A 141 ---DGLACQ-RLGADIIGT 155 (232)
T ss_dssp ---HHHHHH-HTTCSEEEC
T ss_pred ---HHHHHH-hCCCCEEEE
Confidence 677775 999999964
No 69
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=31.88 E-value=50 Score=38.00 Aligned_cols=51 Identities=6% Similarity=0.059 Sum_probs=36.2
Q ss_pred hHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCCh
Q 004721 648 TDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFP 702 (733)
Q Consensus 648 ~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P 702 (733)
+++++.++++|+.++.|.--... ..+|..+.++.+..+ .++||.||=+||.
T Consensus 421 ~eL~~YA~sKGV~iilw~~t~~~---~~n~e~~~d~~f~~~-~~~Gv~GVKvdF~ 471 (738)
T 2d73_A 421 KEIHRYAARKGIKMMMHHETSAS---VRNYERHMDKAYQFM-ADNGYNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTB---HHHHHHHHHHHHHHH-HHTTCCEEEEECC
T ss_pred HHHHHHHHhCCCEEEEEEcCCCc---hhhHHHHHHHHHHHH-HHcCCCEEEeCcc
Confidence 78999999999999999644331 011222333345544 7999999999998
No 70
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=30.43 E-value=22 Score=27.46 Aligned_cols=44 Identities=18% Similarity=0.019 Sum_probs=26.5
Q ss_pred EEeCCCCCC--CCccHHHHHHHHHHcCCCCcEEEeeeeecCCCeEEEe
Q 004721 95 VARGGFSGI--FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICF 140 (733)
Q Consensus 95 iaHRG~~~~--~pENTl~af~~A~~~g~d~~~iE~DV~lTkDg~lVv~ 140 (733)
-+|+|+.|. +-=|=-+.+..|+..--.| .+|+-|- ++||++|++
T Consensus 14 ~~~kgg~g~etyYInIPaeI~kaLgIk~gD-~fel~ve-~kdgeIvLc 59 (68)
T 3o27_A 14 RAYKGGSGHTTFYLLIPKDIAEALDIKPDD-TFILNME-QKDGDIVLS 59 (68)
T ss_dssp EEC-----CCCEEEEECHHHHHHTTCCTTC-CEEEEEE-EETTEEEEE
T ss_pred eeeeCCCCceEEEEeCcHHHHHHhCCCCCC-EEEEEEe-cCCCeEEEE
Confidence 489998843 3334446788888765545 6777666 999988765
No 71
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=28.20 E-value=40 Score=33.78 Aligned_cols=100 Identities=14% Similarity=0.114 Sum_probs=57.7
Q ss_pred hHHHHHHHHc---CCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCC--------ccccchhcccc
Q 004721 330 TTIVLDAHKE---RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT--------PSAAVDCFAHL 398 (733)
Q Consensus 330 ~~~v~~ah~~---Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~--------~~~~l~~~~~~ 398 (733)
.+.+++++.. |+.|.+|+.+| ....+++.+.| ++.|+- -+.. -...++.....
T Consensus 111 ~~tv~aa~~L~k~Gf~Vlpy~~~D------------~~~ak~l~~~G---~~aVmP-lg~pIGsG~Gi~~~~~L~~i~~~ 174 (268)
T 2htm_A 111 LETLKAAERLIEEDFLVLPYMGPD------------LVLAKRLAALG---TATVMP-LAAPIGSGWGVRTRALLELFARE 174 (268)
T ss_dssp HHHHHHHHHHHHTTCEECCEECSC------------HHHHHHHHHHT---CSCBEE-BSSSTTTCCCSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEeeccCCC------------HHHHHHHHhcC---CCEEEe-cCccCcCCcccCCHHHHHHHHHh
Confidence 4566776666 99999999654 37788999889 999843 1110 01112222110
Q ss_pred CCCCCcCC-cceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeecc
Q 004721 399 GKNASKSA-NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI 457 (733)
Q Consensus 399 ~~~~~~~~-~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD~ 457 (733)
..+ -|+|+ --| . .|-+-...|+++|||+|=+=--+++-+-|+.++..
T Consensus 175 -----~~~~vPVI~-~GG---I---~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~a 222 (268)
T 2htm_A 175 -----KASLPPVVV-DAG---L---GLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEA 222 (268)
T ss_dssp -----TTTSSCBEE-ESC---C---CSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHH
T ss_pred -----cCCCCeEEE-eCC---C---CCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHH
Confidence 011 34444 222 1 24556778899999887666555555555555543
No 72
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=27.96 E-value=3e+02 Score=27.58 Aligned_cols=146 Identities=13% Similarity=0.112 Sum_probs=0.0
Q ss_pred HHHHHHHHHh-------cCCCceEEEEecchhHHHhhcCCcHHHHHHHHHHHcCCCCCCCceEEEE-------eCCHHHH
Q 004721 527 LSDFLEMAKN-------ANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQ-------STDSSVL 592 (733)
Q Consensus 527 LeEvL~~~~~-------~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~-------Sfd~~~L 592 (733)
++++++.+.. .... .+.|+|-......+ .+.+.+.++++++++.. .++++- .......
T Consensus 95 l~~a~~~l~~~~~~~~~~~~~-~lsiNls~~~l~~~----~~~~~l~~~l~~~~~~~---~~l~lEItE~~~~~~~~~~~ 166 (294)
T 2r6o_A 95 LEACCTQLRAWQQQGRAADDL-TLSVNISTRQFEGE----HLTRAVDRALARSGLRP---DCLELEITENVMLVMTDEVR 166 (294)
T ss_dssp HHHHHHHHHHHHHTTCSCTTC-CEEEEECGGGGGGG----HHHHHHHHHHHHHCCCG---GGEEEEEEGGGGGGCCHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCe-EEEEEeCHHHhCCc----HHHHHHHHHHHHcCCCc---CEEEEEEeCCchhhChHHHH
Q ss_pred HHHHhc--cCceEEEEeecccchhhhHHHHHHHHH-HhHhcCCCcccccC--CccccccchHHHHHHHHCCCcEEEEecC
Q 004721 593 MKLREK--TSYELVYKVKENIRDALNQTIEDIKKF-ADSVVLSKESVYPL--NSAFITSATDIVQRLQSFKLPVYVETFS 667 (733)
Q Consensus 593 ~~lk~~--p~~~~~~l~~~~~~~~~~~~l~~i~~~-a~~i~~~~~~i~~~--~~~~l~~~~~~v~~~~~~Gl~v~~wTvn 667 (733)
..++.+ -++.+.+=--+. ...++..+..+ .+.|.+....+... +......-..++..+|+.|++|.+=.|.
T Consensus 167 ~~l~~Lr~~G~~ialDDFGt----G~ssl~~L~~l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEGVE 242 (294)
T 2r6o_A 167 TCLDALRARGVRLALDDFGT----GYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEGIE 242 (294)
T ss_dssp HHHHHHHHHTCEEEEEEETS----SCBCHHHHHHSCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEECCCC----CchhHHHHHhCCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEecCC
Q ss_pred CcccccccccCCChHHHHHHHHhhcCcCEEE
Q 004721 668 NEFVSQAWDFFSDPTVEINTYYEGAGIDGVI 698 (733)
Q Consensus 668 ~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIi 698 (733)
+.+ ++..+. ++|||.+.
T Consensus 243 t~~-------------q~~~l~-~lG~d~~Q 259 (294)
T 2r6o_A 243 TAQ-------------QYAFLR-DRGCEFGQ 259 (294)
T ss_dssp SHH-------------HHHHHH-HTTCCEEC
T ss_pred cHH-------------HHHHHH-HcCCCEEE
No 73
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=27.67 E-value=1.9e+02 Score=27.14 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=29.3
Q ss_pred hHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeC
Q 004721 648 TDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITE 700 (733)
Q Consensus 648 ~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD 700 (733)
.++++.++++|+++.+-..+-. ++.+.+..+. +.|+|.|.++
T Consensus 93 ~~~~~~~~~~g~~~~v~~~~~~----------t~~~~~~~~~-~~g~d~i~v~ 134 (211)
T 3f4w_A 93 QSCIRAAKEAGKQVVVDMICVD----------DLPARVRLLE-EAGADMLAVH 134 (211)
T ss_dssp HHHHHHHHHHTCEEEEECTTCS----------SHHHHHHHHH-HHTCCEEEEE
T ss_pred HHHHHHHHHcCCeEEEEecCCC----------CHHHHHHHHH-HcCCCEEEEc
Confidence 5688899999999876322211 2333567775 9999999875
No 74
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=26.65 E-value=3.1e+02 Score=25.02 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=30.2
Q ss_pred chHHHHHHHHCCCcEE---EEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHHHHHHHh
Q 004721 647 ATDIVQRLQSFKLPVY---VETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRSK 711 (733)
Q Consensus 647 ~~~~v~~~~~~Gl~v~---~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~~~~l~~ 711 (733)
++.-++.++++|+... .|..+.. ..+ .+.|.+.|. .|+.+.+.+++
T Consensus 166 s~~Di~aA~~aG~~~i~~v~~g~~~~----------------~~l-~~~~~~~i~--~~~eli~~l~e 214 (216)
T 3kbb_A 166 SKSGVEAAKSAGIERIYGVVHSLNDG----------------KAL-LEAGAVALV--KPEEILNVLKE 214 (216)
T ss_dssp SHHHHHHHHHTTCCCEEEECCSSSCC----------------HHH-HHTTCSEEE--CGGGHHHHHHH
T ss_pred CHHHHHHHHHcCCcEEEEecCCCCCH----------------HHH-HhCCCcEEC--CHHHHHHHHHH
Confidence 4678999999999753 2333333 234 378888776 47777776654
No 75
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=26.15 E-value=85 Score=27.95 Aligned_cols=57 Identities=12% Similarity=-0.020 Sum_probs=42.3
Q ss_pred hHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEe---CChHHHHHHHHhhccccc
Q 004721 648 TDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVIT---EFPMTAARYRSKLVRKQT 717 (733)
Q Consensus 648 ~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiT---D~P~~~~~~l~~~~~~~~ 717 (733)
...++.++++|+++.+-|-+... .+...+...|++.++. +.|..+..+++..+.+++
T Consensus 37 ~~~l~~l~~~g~~~~i~T~~~~~-------------~~~~~~~~~gl~~~~~~~kpk~~~~~~~~~~~~~~~~ 96 (164)
T 3e8m_A 37 SAGIFWAHNKGIPVGILTGEKTE-------------IVRRRAEKLKVDYLFQGVVDKLSAAEELCNELGINLE 96 (164)
T ss_dssp HHHHHHHHHTTCCEEEECSSCCH-------------HHHHHHHHTTCSEEECSCSCHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHCCCEEEEEeCCChH-------------HHHHHHHHcCCCEeecccCChHHHHHHHHHHcCCCHH
Confidence 34589999999999999866554 5667777889998877 467777777777654443
No 76
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=25.41 E-value=2e+02 Score=28.04 Aligned_cols=78 Identities=13% Similarity=0.199 Sum_probs=52.3
Q ss_pred ChHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCcc---ccchhccccCCCCCcC
Q 004721 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPS---AAVDCFAHLGKNASKS 405 (733)
Q Consensus 329 ~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~~---~~l~~~~~~~~~~~~~ 405 (733)
+++.++.+++.|+.+.+-.. + ..|+.+.+++| +|.|-. +|.... ++++.... ..
T Consensus 116 ~~~vi~~~~~~gi~~ipGv~-T------------ptEi~~A~~~G---ad~vK~-FPa~~~gG~~~lkal~~-----p~- 172 (232)
T 4e38_A 116 NPNTVRACQEIGIDIVPGVN-N------------PSTVEAALEMG---LTTLKF-FPAEASGGISMVKSLVG-----PY- 172 (232)
T ss_dssp CHHHHHHHHHHTCEEECEEC-S------------HHHHHHHHHTT---CCEEEE-CSTTTTTHHHHHHHHHT-----TC-
T ss_pred CHHHHHHHHHcCCCEEcCCC-C------------HHHHHHHHHcC---CCEEEE-CcCccccCHHHHHHHHH-----Hh-
Confidence 47899999999999988653 2 37889999999 999988 996543 44554431 11
Q ss_pred CcceEEecCCCCCCCCCchHHHHHHHHHCCC
Q 004721 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGV 436 (733)
Q Consensus 406 ~~~~iIaHRG~~~~~PENTl~Af~~A~~~Ga 436 (733)
+..-+++=.|- .|||- ...++.|+
T Consensus 173 p~ip~~ptGGI---~~~n~----~~~l~aGa 196 (232)
T 4e38_A 173 GDIRLMPTGGI---TPSNI----DNYLAIPQ 196 (232)
T ss_dssp TTCEEEEBSSC---CTTTH----HHHHTSTT
T ss_pred cCCCeeeEcCC---CHHHH----HHHHHCCC
Confidence 22345665554 47773 33345565
No 77
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=24.19 E-value=89 Score=31.18 Aligned_cols=97 Identities=10% Similarity=0.054 Sum_probs=55.1
Q ss_pred HHHHHHHHc---CCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCCCCc--------cccchhccccC
Q 004721 331 TIVLDAHKE---RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTP--------SAAVDCFAHLG 399 (733)
Q Consensus 331 ~~v~~ah~~---Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~~~--------~~~l~~~~~~~ 399 (733)
+.++.++.. |+.|.++|+++ ....+++.+.| ++.|+- .+... ...++....
T Consensus 123 ~tv~aa~~L~~~Gf~Vlpy~~dd------------~~~akrl~~~G---~~aVmP-lg~pIGsG~Gi~~~~lI~~I~e-- 184 (265)
T 1wv2_A 123 ETLKAAEQLVKDGFDVMVYTSDD------------PIIARQLAEIG---CIAVMP-LAGLIGSGLGICNPYNLRIILE-- 184 (265)
T ss_dssp HHHHHHHHHHTTTCEEEEEECSC------------HHHHHHHHHSC---CSEEEE-CSSSTTCCCCCSCHHHHHHHHH--
T ss_pred HHHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHHhC---CCEEEe-CCccCCCCCCcCCHHHHHHHHh--
Confidence 455555554 99999999765 47889999999 999943 11110 011111111
Q ss_pred CCCCcCCcceEEecCCCCCCCCCchHHHHHHHHHCCCCeeecCceeecCCeEEEeec
Q 004721 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSF 456 (733)
Q Consensus 400 ~~~~~~~~~~iIaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDgv~Vv~HD 456 (733)
..+-| ||+--|- +|-+--.+|+++|||+|=+=--+++-+-|+.++.
T Consensus 185 ----~~~vP-VI~eGGI------~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~ 230 (265)
T 1wv2_A 185 ----EAKVP-VLVDAGV------GTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAE 230 (265)
T ss_dssp ----HCSSC-BEEESCC------CSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHH
T ss_pred ----cCCCC-EEEeCCC------CCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHH
Confidence 11234 4442221 3455677888899988766555555444444443
No 78
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=23.27 E-value=38 Score=29.11 Aligned_cols=31 Identities=10% Similarity=0.134 Sum_probs=22.7
Q ss_pred HCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEe
Q 004721 656 SFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVIT 699 (733)
Q Consensus 656 ~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiT 699 (733)
+.|+.+|+|-.++.+ .|.+-+.+..+||+++
T Consensus 62 DlG~el~~WKp~eVd-------------km~~k~~q~~~dGl~i 92 (126)
T 2rbg_A 62 DIGYELFLWKKNEVD-------------IFLKNLEKSEVDGLLV 92 (126)
T ss_dssp TSEEEEEEECGGGHH-------------HHHHHHTTCCCCEEEE
T ss_pred ccceEEEEeCHHHHH-------------HHHHHHHHhCCCceEE
Confidence 358899999877665 4444445889999976
No 79
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=22.97 E-value=4.2e+02 Score=25.61 Aligned_cols=108 Identities=18% Similarity=0.231 Sum_probs=0.0
Q ss_pred CceEEEEe--------CCHHHHHHHH---hccCceEEEEeecccchh------hhHHHHHHHHH----HhHhcCCCcccc
Q 004721 579 ALKVMIQS--------TDSSVLMKLR---EKTSYELVYKVKENIRDA------LNQTIEDIKKF----ADSVVLSKESVY 637 (733)
Q Consensus 579 ~~~vii~S--------fd~~~L~~lk---~~p~~~~~~l~~~~~~~~------~~~~l~~i~~~----a~~i~~~~~~i~ 637 (733)
++|+-+.| .+...++.++ +..++|+..++....+++ -....++++.+ ++++-. ..+-
T Consensus 22 AdRIELc~~L~~GGlTPS~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~--G~Lt 99 (224)
T 2bdq_A 22 ISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVL--GILT 99 (224)
T ss_dssp CCEEEEEBCGGGTCBCCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEE--CCBC
T ss_pred CCEEEEcCCcccCCcCCCHHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEE--eeEC
Q ss_pred cCCccccccchHHHHHHHHCCCcEEEEecCCcccccccccC--CChHHHHHHHHhhcCcCEEEe
Q 004721 638 PLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFF--SDPTVEINTYYEGAGIDGVIT 699 (733)
Q Consensus 638 ~~~~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~--~d~~~e~~~~l~~~GVdgIiT 699 (733)
+...-.......+++.++ |++ ||+... +|.- .||.+.+..+. ++||+.|.|
T Consensus 100 ~dg~iD~~~~~~Li~~a~--~~~---vTFHRA-----FD~~~~~d~~~ale~L~-~lGv~rILT 152 (224)
T 2bdq_A 100 SNNHIDTEAIEQLLPATQ--GLP---LVFHMA-----FDVIPKSDQKKSIDQLV-ALGFTRILL 152 (224)
T ss_dssp TTSSBCHHHHHHHHHHHT--TCC---EEECGG-----GGGSCTTTHHHHHHHHH-HTTCCEEEE
T ss_pred CCCCcCHHHHHHHHHHhC--CCe---EEEECc-----hhccCCcCHHHHHHHHH-HcCCCEEEC
No 80
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=22.16 E-value=4.4e+02 Score=27.32 Aligned_cols=32 Identities=3% Similarity=-0.061 Sum_probs=24.0
Q ss_pred CCCEEEEeCCCCCC-CCccHHHHHHHHHHcCCC
Q 004721 90 DPPFVVARGGFSGI-FPDSSSIAYSLTLITSAP 121 (733)
Q Consensus 90 ~~~~viaHRG~~~~-~pENTl~af~~A~~~g~d 121 (733)
.+|+|||==|.... --|--..=++.|.+.|+|
T Consensus 4 ~~~~IIAEig~NHnGdle~Ak~lI~~A~~aGad 36 (350)
T 3g8r_A 4 SKPLFIFEMANNHMGNVEHGVALIRAIRESCQG 36 (350)
T ss_dssp -CCEEEEECTTTTTTCSHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEEECCCccCcHHHHHHHHHHHHHhCCc
Confidence 46899998888744 466666777788888986
No 81
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=22.15 E-value=87 Score=28.67 Aligned_cols=54 Identities=7% Similarity=0.012 Sum_probs=39.3
Q ss_pred HHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEe---CChHHHHHHHHhhccccc
Q 004721 650 IVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVIT---EFPMTAARYRSKLVRKQT 717 (733)
Q Consensus 650 ~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiT---D~P~~~~~~l~~~~~~~~ 717 (733)
.++.++++|+++.+-|-+... .+...+..+|++ ++. +.|..+..+++..+.+++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~-------------~~~~~~~~lgi~-~~~~~~~k~~~l~~~~~~~~~~~~ 103 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNP-------------VVAARARKLKIP-VLHGIDRKDLALKQWCEEQGIAPE 103 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCH-------------HHHHHHHHHTCC-EEESCSCHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHCCCeEEEEECcChH-------------HHHHHHHHcCCe-eEeCCCChHHHHHHHHHHcCCCHH
Confidence 589999999999999866664 566777788998 654 456666777766654433
No 82
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=21.77 E-value=85 Score=30.00 Aligned_cols=54 Identities=11% Similarity=0.003 Sum_probs=40.5
Q ss_pred HHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEe---CChHHHHHHHHhhcccc
Q 004721 650 IVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVIT---EFPMTAARYRSKLVRKQ 716 (733)
Q Consensus 650 ~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiT---D~P~~~~~~l~~~~~~~ 716 (733)
.++.++++|+++.+-|-+... .+...+..+|++.++. +.|+.+..+++..+.++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~-------------~~~~~l~~lgi~~~f~~~k~K~~~l~~~~~~lg~~~ 140 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAK-------------LLEDRANTLGITHLYQGQSDKLVAYHELLATLQCQP 140 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCH-------------HHHHHHHHHTCCEEECSCSSHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHCCCEEEEEeCCCHH-------------HHHHHHHHcCCchhhcccCChHHHHHHHHHHcCcCc
Confidence 688999999999998877664 5667777889888765 46777777777655443
No 83
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=21.70 E-value=2e+02 Score=27.86 Aligned_cols=118 Identities=14% Similarity=0.169 Sum_probs=69.0
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCH---HHHHHHHhc-cCceEEEEeecccchhhhHHHHHHHHHHhHhcCCCcccc
Q 004721 562 TNSVMEALGNAGYNKQTALKVMIQSTDS---SVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVY 637 (733)
Q Consensus 562 ~~~v~~~l~~~~~~~~~~~~vii~Sfd~---~~L~~lk~~-p~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i~ 637 (733)
...+.+.+-+.|+. -+-+..-.+ +.++.+++. |+..++.- .+- + .++++...+. ....+.
T Consensus 27 a~~~a~al~~gGi~-----~iEvt~~t~~a~~~I~~l~~~~p~~~IGAG---TVl--t---~~~a~~ai~A---GA~fiv 90 (217)
T 3lab_A 27 AIPMAKALVAGGVH-----LLEVTLRTEAGLAAISAIKKAVPEAIVGAG---TVC--T---ADDFQKAIDA---GAQFIV 90 (217)
T ss_dssp HHHHHHHHHHTTCC-----EEEEETTSTTHHHHHHHHHHHCTTSEEEEE---CCC--S---HHHHHHHHHH---TCSEEE
T ss_pred HHHHHHHHHHcCCC-----EEEEeCCCccHHHHHHHHHHHCCCCeEeec---ccc--C---HHHHHHHHHc---CCCEEE
Confidence 34567777777875 444443333 456666666 77655432 111 1 2233222111 223333
Q ss_pred cCCccccccchHHHHHHHHCCC------cEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCChHHH---HHH
Q 004721 638 PLNSAFITSATDIVQRLQSFKL------PVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTA---ARY 708 (733)
Q Consensus 638 ~~~~~~l~~~~~~v~~~~~~Gl------~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~P~~~---~~~ 708 (733)
.. ..++++++.++++|+ .+.. .+.++. |+.+.+ ++|+|.|=. +|... .++
T Consensus 91 sP-----~~~~evi~~~~~~~v~~~~~~~~~P-G~~Tpt-------------E~~~A~-~~Gad~vK~-FPa~~~gG~~~ 149 (217)
T 3lab_A 91 SP-----GLTPELIEKAKQVKLDGQWQGVFLP-GVATAS-------------EVMIAA-QAGITQLKC-FPASAIGGAKL 149 (217)
T ss_dssp ES-----SCCHHHHHHHHHHHHHCSCCCEEEE-EECSHH-------------HHHHHH-HTTCCEEEE-TTTTTTTHHHH
T ss_pred eC-----CCcHHHHHHHHHcCCCccCCCeEeC-CCCCHH-------------HHHHHH-HcCCCEEEE-CccccccCHHH
Confidence 21 126899999999999 8877 445555 788886 999998866 77653 466
Q ss_pred HHhhcccc
Q 004721 709 RSKLVRKQ 716 (733)
Q Consensus 709 l~~~~~~~ 716 (733)
++......
T Consensus 150 lkal~~p~ 157 (217)
T 3lab_A 150 LKAWSGPF 157 (217)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhh
Confidence 66554443
No 84
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=21.65 E-value=4.9e+02 Score=27.57 Aligned_cols=133 Identities=8% Similarity=0.074 Sum_probs=70.2
Q ss_pred eEEEEecchhHHHhhcCCcHHHH--HHHHHHHcCCCCCCCceEEEEeC------C-HHHHHHHHhc--cCceEEEEeecc
Q 004721 542 GVLISIENAVYLAEKQGMSVTNS--VMEALGNAGYNKQTALKVMIQST------D-SSVLMKLREK--TSYELVYKVKEN 610 (733)
Q Consensus 542 ~l~iEiK~~~~~~~~~~~~~~~~--v~~~l~~~~~~~~~~~~vii~Sf------d-~~~L~~lk~~--p~~~~~~l~~~~ 610 (733)
.+.|++-...... ..+.+. +.+.++++++.. .++++--- + ......++.+ -++.+. +-+-+
T Consensus 108 ~l~iNls~~~l~~----~~~~~~~~l~~~l~~~~~~~---~~l~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ia-lDDFG 179 (431)
T 2bas_A 108 LIFMNQDANLLML----DHGESFLELLKEYEAKGIEL---HRFVLEITEHNFEGDIEQLYHMLAYYRTYGIKIA-VDNIG 179 (431)
T ss_dssp EEEEECCHHHHGG----GTTHHHHHHHHHHHHTTCCG---GGEEEEECCTTCCSCHHHHHHHHHHHHTTTCEEE-EEEET
T ss_pred eEEEEECHHHHCC----cccccHHHHHHHHHHcCCCC---CeEEEEEECChhhCCHHHHHHHHHHHHHCCCEEE-EECCC
Confidence 5777776544322 245555 778888888763 45554422 1 1233333333 345443 21111
Q ss_pred cchhhhHHHHHHHHH-HhHhcCCCcccccCC--ccccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHH
Q 004721 611 IRDALNQTIEDIKKF-ADSVVLSKESVYPLN--SAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINT 687 (733)
Q Consensus 611 ~~~~~~~~l~~i~~~-a~~i~~~~~~i~~~~--~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~ 687 (733)
.+ ..++..+..+ .+.|.+....+.... ......-..++..+|+.|++|.+=.|.+++ ++..
T Consensus 180 ~g---~ssl~~L~~l~~d~iKID~s~v~~~~~~~~~~~il~~ii~la~~lg~~vvAEGVEt~~-------------q~~~ 243 (431)
T 2bas_A 180 KE---SSNLDRIALLSPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYEDIEANF-------------QLQY 243 (431)
T ss_dssp TT---BCCHHHHHHHCCSEEEEECTTTC----CCHHHHHHHHHHHHHHHHTCEEEEECCCSHH-------------HHHH
T ss_pred CC---cHHHHHHHhCCCCEEEECHHHHhhhhcCHhHHHHHHHHHHHHHHcCCEEEEEeCCCHH-------------HHHH
Confidence 11 1224455444 333333332222111 001111256778889999999999999986 5665
Q ss_pred HHhhcCcCEEEe
Q 004721 688 YYEGAGIDGVIT 699 (733)
Q Consensus 688 ~l~~~GVdgIiT 699 (733)
+ .++|||.++=
T Consensus 244 l-~~lG~d~~QG 254 (431)
T 2bas_A 244 A-WRNGGRYFQG 254 (431)
T ss_dssp H-HHTTEEEECS
T ss_pred H-HHcCCCEEee
Confidence 5 5999998753
No 85
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=21.45 E-value=2e+02 Score=26.17 Aligned_cols=39 Identities=13% Similarity=0.261 Sum_probs=24.7
Q ss_pred hHHHHHHHHCCC---cEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeC
Q 004721 648 TDIVQRLQSFKL---PVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITE 700 (733)
Q Consensus 648 ~~~v~~~~~~Gl---~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD 700 (733)
+++++.+++.|. +|++-..--. .++..+ .+.|+|+|++.
T Consensus 87 ~~~i~~L~~~g~~~i~v~vGG~~~~-------------~~~~~l-~~~G~d~v~~~ 128 (161)
T 2yxb_A 87 KRLMAKLRELGADDIPVVLGGTIPI-------------PDLEPL-RSLGIREIFLP 128 (161)
T ss_dssp HHHHHHHHHTTCTTSCEEEEECCCH-------------HHHHHH-HHTTCCEEECT
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCch-------------hcHHHH-HHCCCcEEECC
Confidence 567888888774 4555443222 145445 58999998874
No 86
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=20.98 E-value=3e+02 Score=27.02 Aligned_cols=138 Identities=9% Similarity=-0.056 Sum_probs=76.7
Q ss_pred cHHHHHHhhCCCceEeecc--CchhhhhcCCcHHHHHHHHHhhcCCceecc------C--CHHHHHHHHHhcCCCcccch
Q 004721 207 TVQDMARQIKPPGLWLNIQ--HDAFYAQHNLSMRSFVLSVSRSVVVNYISS------P--EVNFLRSIAARFRPSMTKLV 276 (733)
Q Consensus 207 tL~e~l~~~~~~~l~iEiK--~~~~~~~~~~~~~~~v~~~l~~~~~~~i~S------F--~~~~l~~l~~~~p~~~~~~~ 276 (733)
.|.++|... ...++.|+| +|....-...+ ...+.+...+.|...|+- | +.+.++.+++.. +.|+.
T Consensus 36 ~~~~al~~~-~~~~IaE~k~aSPskg~i~~~~-p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v---~lPvl 110 (254)
T 1vc4_A 36 SFKEALLRP-GLSVIAEVKRQSPSEGLIREVD-PVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV---DLPLL 110 (254)
T ss_dssp CHHHHHTSS-SCEEEEEECSCCTTTCCCCSCC-HHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC---CSCEE
T ss_pred CHHHHHhhc-CCcEEeeecCCCcCCCcCCCCC-HHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhc---CCCEE
Confidence 688888632 467899999 44311100111 234455666677654322 2 577888888865 35543
Q ss_pred hhhcCCCccCCCCCcchhHHHhhHHH-HHhhcccccCCccccccCCCccCCCCChHHHHHHHHcCCeEEEeecCCCCCcc
Q 004721 277 FRFLGKSEIEPTTNQTYGSLLKNLTF-IKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPIS 355 (733)
Q Consensus 277 ~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~a~~i~~~~~~i~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~ 355 (733)
. .+.+. ..| .+.. ....|+++......+. . .-.++++.+|..|+.+.+-+-+
T Consensus 111 ~----kdfI~----d~~-----qi~~a~~~GAD~VlL~~~~l~-~-------~l~~l~~~a~~lGl~~lvev~~------ 163 (254)
T 1vc4_A 111 R----KDFVV----DPF-----MLEEARAFGASAALLIVALLG-E-------LTGAYLEEARRLGLEALVEVHT------ 163 (254)
T ss_dssp E----ESCCC----SHH-----HHHHHHHTTCSEEEEEHHHHG-G-------GHHHHHHHHHHHTCEEEEEECS------
T ss_pred E----CCcCC----CHH-----HHHHHHHcCCCEEEECccchH-H-------HHHHHHHHHHHCCCeEEEEECC------
Confidence 2 11110 011 1111 2224666654322221 1 1257889999999998765522
Q ss_pred cCCCCChHHHHHHHHhcCCcccceEEecCCC
Q 004721 356 FNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (733)
Q Consensus 356 ~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P~ 386 (733)
.+|..+..+.| +|.|-.+...
T Consensus 164 -------~~E~~~a~~~g---ad~IGvn~~~ 184 (254)
T 1vc4_A 164 -------ERELEIALEAG---AEVLGINNRD 184 (254)
T ss_dssp -------HHHHHHHHHHT---CSEEEEESBC
T ss_pred -------HHHHHHHHHcC---CCEEEEcccc
Confidence 26788899999 9988666533
No 87
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=20.93 E-value=3.1e+02 Score=28.90 Aligned_cols=145 Identities=15% Similarity=0.170 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCceEEEEecchhHHHhhcCCcHHHHHHHHHHHcCCCCCCCceEEEE------eCCHHHHHHHHhc--
Q 004721 527 LSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQ------STDSSVLMKLREK-- 598 (733)
Q Consensus 527 LeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~------Sfd~~~L~~lk~~-- 598 (733)
++.+++.+... .. .+.|++-......+ .+.+.+.+.+++++... .++++- .-+......++.+
T Consensus 264 l~~~~~~~~~~-~~-~~~iNls~~~l~~~----~~~~~l~~~l~~~~~~~---~~l~lEitE~~~~~~~~~~~~~~~l~~ 334 (430)
T 3pjx_A 264 LERVLEQMAGH-EE-SLALNLSSATLADP----QALNKVFEILRAHSNLG---ARLTLEIGEEQLPEQAVLEQLTRRLRE 334 (430)
T ss_dssp HHHHHHHHTTC-CC-CEEEECCHHHHHCH----HHHHHHHHHHHTTGGGG---GGEEEEEEGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CC-cEEEEeCHHHhCCh----HHHHHHHHHHHhcCCCC---ceEEEEEECccccccHHHHHHHHHHHH
Q ss_pred cCceEEEEeecccchhhhHHHHHHHHH-HhHhcCCCcccccC--CccccccchHHHHHHHHCCCcEEEEecCCccccccc
Q 004721 599 TSYELVYKVKENIRDALNQTIEDIKKF-ADSVVLSKESVYPL--NSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAW 675 (733)
Q Consensus 599 p~~~~~~l~~~~~~~~~~~~l~~i~~~-a~~i~~~~~~i~~~--~~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~ 675 (733)
-++++.+=--+. ...++..+..+ .+.|.+....+... .......-..++..+|..|++|.+=.|.+++
T Consensus 335 ~G~~ialDdfG~----g~ssl~~L~~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~l~~~viaeGVEt~~----- 405 (430)
T 3pjx_A 335 LGFSLSLQRFGG----RFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEG----- 405 (430)
T ss_dssp HTCEEEEEEECC----CHHHHCTHHHHCCSCEEECGGGTTTTTTCHHHHHHHHHHHHHHHTTTCCEEECCCCCHH-----
T ss_pred CCCEEEEeCCCC----CchhHHHHHhCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHCCCcEEEEecCCHH-----
Q ss_pred ccCCChHHHHHHHHhhcCcCEEE
Q 004721 676 DFFSDPTVEINTYYEGAGIDGVI 698 (733)
Q Consensus 676 ~~~~d~~~e~~~~l~~~GVdgIi 698 (733)
++..+. ++|||.+.
T Consensus 406 --------~~~~l~-~~g~~~~Q 419 (430)
T 3pjx_A 406 --------ELSVIR-EMGLYGVQ 419 (430)
T ss_dssp --------HHHHHH-HTTCSEEE
T ss_pred --------HHHHHH-HcCCCeec
No 88
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=20.71 E-value=5e+02 Score=23.92 Aligned_cols=103 Identities=14% Similarity=-0.022 Sum_probs=58.1
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEE--eCC-HHHHHHHHhc-c-CceEEEEeecccchhhhHHHHHHHHHHhHhcCCCccc
Q 004721 562 TNSVMEALGNAGYNKQTALKVMIQ--STD-SSVLMKLREK-T-SYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESV 636 (733)
Q Consensus 562 ~~~v~~~l~~~~~~~~~~~~vii~--Sfd-~~~L~~lk~~-p-~~~~~~l~~~~~~~~~~~~l~~i~~~a~~i~~~~~~i 636 (733)
...+++.+.+.|.. -+-+. +.+ .+.++.+|+. | +..++.-.-. + .+++... ...+. +++
T Consensus 24 ~~~~~~~~~~~G~~-----~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~-----~---~~~~~~a-~~~Ga--d~i 87 (205)
T 1wa3_A 24 AKEKALAVFEGGVH-----LIEITFTVPDADTVIKELSFLKEKGAIIGAGTVT-----S---VEQCRKA-VESGA--EFI 87 (205)
T ss_dssp HHHHHHHHHHTTCC-----EEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCC-----S---HHHHHHH-HHHTC--SEE
T ss_pred HHHHHHHHHHCCCC-----EEEEeCCChhHHHHHHHHHHHCCCCcEEEecccC-----C---HHHHHHH-HHcCC--CEE
Confidence 34567778888765 33232 111 2457777777 6 5555431111 1 1222111 11222 233
Q ss_pred -ccCCccccccchHHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeCC
Q 004721 637 -YPLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEF 701 (733)
Q Consensus 637 -~~~~~~~l~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD~ 701 (733)
.+. ...++++.+++.|+++.+ .+.+.. ++.+.+ ++|+|.|-...
T Consensus 88 v~~~------~~~~~~~~~~~~g~~vi~-g~~t~~-------------e~~~a~-~~Gad~vk~~~ 132 (205)
T 1wa3_A 88 VSPH------LDEEISQFCKEKGVFYMP-GVMTPT-------------ELVKAM-KLGHTILKLFP 132 (205)
T ss_dssp ECSS------CCHHHHHHHHHHTCEEEC-EECSHH-------------HHHHHH-HTTCCEEEETT
T ss_pred EcCC------CCHHHHHHHHHcCCcEEC-CcCCHH-------------HHHHHH-HcCCCEEEEcC
Confidence 221 136799999999999987 444443 678886 99999987653
No 89
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=20.56 E-value=95 Score=28.77 Aligned_cols=56 Identities=7% Similarity=-0.002 Sum_probs=40.9
Q ss_pred HHHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeC---ChHHHHHHHHhhccccc
Q 004721 649 DIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITE---FPMTAARYRSKLVRKQT 717 (733)
Q Consensus 649 ~~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD---~P~~~~~~l~~~~~~~~ 717 (733)
..++.++++|+++.+-|-+... .+...+..+|++.++.. .|+.+..+++..+.+++
T Consensus 53 ~~l~~L~~~g~~~~i~T~~~~~-------------~~~~~~~~lgl~~~f~~~~~K~~~~~~~~~~~g~~~~ 111 (189)
T 3mn1_A 53 QGIKMLIASGVTTAIISGRKTA-------------IVERRAKSLGIEHLFQGREDKLVVLDKLLAELQLGYE 111 (189)
T ss_dssp HHHHHHHHTTCEEEEECSSCCH-------------HHHHHHHHHTCSEEECSCSCHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHCCCEEEEEECcChH-------------HHHHHHHHcCCHHHhcCcCChHHHHHHHHHHcCCChh
Confidence 3789999999999998877664 56677778899887754 56666666666554433
No 90
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=20.22 E-value=39 Score=38.87 Aligned_cols=51 Identities=20% Similarity=0.206 Sum_probs=37.3
Q ss_pred hHHHHHHHHcCCeEEEeecCCCCCcccCCCCChHHHHHHHHhcCCcccceEEecCC
Q 004721 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (733)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~~~~~l~~~G~~~VDgIiTD~P 385 (733)
+++++.|++.|..++.|.--.... .++..+-.+.++++-++| |.||=+||-
T Consensus 421 ~eL~~YA~sKGV~iilw~~t~~~~--~n~e~~~d~~f~~~~~~G---v~GVKvdF~ 471 (738)
T 2d73_A 421 KEIHRYAARKGIKMMMHHETSASV--RNYERHMDKAYQFMADNG---YNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTBH--HHHHHHHHHHHHHHHHTT---CCEEEEECC
T ss_pred HHHHHHHHhCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHcC---CCEEEeCcc
Confidence 789999999999999998533200 001111235788889999 999999998
No 91
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=20.07 E-value=1.2e+02 Score=28.23 Aligned_cols=56 Identities=13% Similarity=0.049 Sum_probs=42.1
Q ss_pred HHHHHHHCCCcEEEEecCCcccccccccCCChHHHHHHHHhhcCcCEEEeC---ChHHHHHHHHhhcccccc
Q 004721 650 IVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITE---FPMTAARYRSKLVRKQTS 718 (733)
Q Consensus 650 ~v~~~~~~Gl~v~~wTvn~~~~~~~~~~~~d~~~e~~~~l~~~GVdgIiTD---~P~~~~~~l~~~~~~~~~ 718 (733)
.++.++++|+++.+-|-+... .+...+..+|++.++.. .|..+..+++..+.+++.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~-------------~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~~~~~~~ 112 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNA-------------VVDHRMEQLGITHYYKGQVDKRSAYQHLKKTLGLNDDE 112 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSH-------------HHHHHHHHHTCCEEECSCSSCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEeCcChH-------------HHHHHHHHcCCccceeCCCChHHHHHHHHHHhCCCHHH
Confidence 389999999999999866554 56667778899988765 577788887776555443
Done!